Query 015894
Match_columns 398
No_of_seqs 151 out of 1162
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 04:22:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015894.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015894hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydo_A HMG-COA lyase; TIM-barr 100.0 4E-74 1.4E-78 565.7 29.2 299 94-392 3-301 (307)
2 2cw6_A Hydroxymethylglutaryl-C 100.0 1.3E-71 4.6E-76 545.3 32.9 297 93-389 1-297 (298)
3 2ftp_A Hydroxymethylglutaryl-C 100.0 1.7E-70 5.8E-75 538.5 33.0 295 93-387 4-298 (302)
4 3rmj_A 2-isopropylmalate synth 100.0 8.6E-68 2.9E-72 532.4 32.9 287 94-398 9-307 (370)
5 3eeg_A 2-isopropylmalate synth 100.0 4.7E-68 1.6E-72 526.3 23.4 288 93-398 2-301 (325)
6 1ydn_A Hydroxymethylglutaryl-C 100.0 2.1E-66 7.3E-71 507.2 33.2 290 94-383 1-290 (295)
7 3ble_A Citramalate synthase fr 100.0 5.9E-66 2E-70 513.7 30.0 289 94-398 16-313 (337)
8 3ivs_A Homocitrate synthase, m 100.0 2.1E-63 7.2E-68 506.6 28.0 286 94-398 36-325 (423)
9 2ztj_A Homocitrate synthase; ( 100.0 9.3E-62 3.2E-66 490.8 27.3 281 97-398 3-291 (382)
10 3ewb_X 2-isopropylmalate synth 100.0 9E-61 3.1E-65 467.9 28.5 272 96-384 4-287 (293)
11 3hq1_A 2-isopropylmalate synth 100.0 1.1E-59 3.7E-64 497.2 27.8 293 94-398 68-378 (644)
12 1rqb_A Transcarboxylase 5S sub 100.0 1.2E-53 4.3E-58 445.8 24.8 275 95-396 22-318 (539)
13 1nvm_A HOA, 4-hydroxy-2-oxoval 100.0 1.6E-52 5.4E-57 418.1 29.4 257 95-377 6-274 (345)
14 2nx9_A Oxaloacetate decarboxyl 100.0 4.5E-52 1.5E-56 428.4 26.2 269 95-390 5-293 (464)
15 3dxi_A Putative aldolase; TIM 100.0 3.8E-52 1.3E-56 411.1 19.7 265 97-397 2-277 (320)
16 3bg3_A Pyruvate carboxylase, m 100.0 4.9E-50 1.7E-54 431.2 29.0 281 95-396 100-406 (718)
17 2qf7_A Pyruvate carboxylase pr 100.0 2.6E-46 9E-51 421.9 23.1 277 95-395 548-850 (1165)
18 3hbl_A Pyruvate carboxylase; T 100.0 3.5E-45 1.2E-49 412.1 27.0 277 95-392 530-831 (1150)
19 2ekc_A AQ_1548, tryptophan syn 98.7 1.4E-07 4.9E-12 90.0 14.9 173 115-321 27-231 (262)
20 3t7v_A Methylornithine synthas 98.7 1.5E-06 5.2E-11 85.5 21.0 228 114-357 89-338 (350)
21 3nav_A Tryptophan synthase alp 98.3 5E-06 1.7E-10 79.9 12.3 176 115-321 30-234 (271)
22 3vnd_A TSA, tryptophan synthas 98.2 6E-06 2.1E-10 79.2 11.3 174 115-321 28-232 (267)
23 1qop_A Tryptophan synthase alp 98.2 8.7E-06 3E-10 77.7 12.3 173 115-321 27-231 (268)
24 3f4w_A Putative hexulose 6 pho 98.1 8.3E-06 2.8E-10 74.3 9.9 170 115-323 9-186 (211)
25 3iix_A Biotin synthetase, puta 98.1 0.00058 2E-08 66.5 22.1 230 115-360 83-337 (348)
26 1rd5_A Tryptophan synthase alp 97.9 0.0002 6.7E-09 67.7 14.5 176 115-323 28-229 (262)
27 1r30_A Biotin synthase; SAM ra 97.7 0.0054 1.9E-07 60.5 22.1 218 115-357 98-335 (369)
28 3lab_A Putative KDPG (2-keto-3 97.6 0.002 6.7E-08 59.9 15.4 150 116-319 22-182 (217)
29 3txv_A Probable tagatose 6-pho 97.5 0.0047 1.6E-07 62.9 17.8 209 98-324 47-289 (450)
30 3tha_A Tryptophan synthase alp 97.4 0.00095 3.2E-08 63.4 11.7 174 115-321 24-224 (252)
31 4e38_A Keto-hydroxyglutarate-a 97.4 0.0019 6.5E-08 60.6 13.6 151 116-320 43-198 (232)
32 1wa3_A 2-keto-3-deoxy-6-phosph 97.4 0.011 3.8E-07 53.2 18.4 155 116-322 19-176 (205)
33 1eye_A DHPS 1, dihydropteroate 97.2 0.074 2.5E-06 51.0 22.5 203 99-324 10-255 (280)
34 2isw_A Putative fructose-1,6-b 97.2 0.015 5E-07 57.1 16.9 191 115-323 25-254 (323)
35 3r12_A Deoxyribose-phosphate a 97.1 0.035 1.2E-06 52.7 18.3 190 99-325 45-246 (260)
36 1geq_A Tryptophan synthase alp 97.1 0.034 1.2E-06 51.4 18.2 173 115-322 15-218 (248)
37 3oa3_A Aldolase; structural ge 97.1 0.069 2.3E-06 51.5 20.4 194 98-325 59-264 (288)
38 2dqw_A Dihydropteroate synthas 97.1 0.042 1.4E-06 53.2 19.0 205 98-323 32-269 (294)
39 1w8s_A FBP aldolase, fructose- 96.9 0.018 6.3E-07 54.6 15.0 177 117-323 39-230 (263)
40 1rvg_A Fructose-1,6-bisphospha 96.9 0.028 9.7E-07 54.6 16.3 190 115-323 24-252 (305)
41 1h1y_A D-ribulose-5-phosphate 96.9 0.019 6.4E-07 53.0 14.5 171 120-322 20-199 (228)
42 3q94_A Fructose-bisphosphate a 96.8 0.044 1.5E-06 52.9 16.9 197 108-323 19-235 (288)
43 4h3d_A 3-dehydroquinate dehydr 96.8 0.16 5.3E-06 48.1 20.4 226 93-353 3-253 (258)
44 1tqj_A Ribulose-phosphate 3-ep 96.8 0.0079 2.7E-07 55.9 11.2 170 119-322 17-199 (230)
45 1aj0_A DHPS, dihydropteroate s 96.8 0.18 6.3E-06 48.3 21.0 169 98-288 18-206 (282)
46 1n7k_A Deoxyribose-phosphate a 96.8 0.32 1.1E-05 45.4 22.0 185 99-324 22-221 (234)
47 3ovp_A Ribulose-phosphate 3-ep 96.8 0.01 3.5E-07 55.2 11.5 166 119-322 17-195 (228)
48 3ctl_A D-allulose-6-phosphate 96.7 0.011 3.9E-07 55.1 11.6 166 122-322 16-193 (231)
49 3ngj_A Deoxyribose-phosphate a 96.7 0.08 2.7E-06 49.7 17.2 189 100-325 30-230 (239)
50 2yw3_A 4-hydroxy-2-oxoglutarat 96.7 0.019 6.6E-07 52.5 12.7 152 119-322 25-177 (207)
51 3ajx_A 3-hexulose-6-phosphate 96.7 0.099 3.4E-06 46.8 17.3 165 116-322 10-184 (207)
52 3noy_A 4-hydroxy-3-methylbut-2 96.7 0.56 1.9E-05 46.4 25.0 229 116-389 43-310 (366)
53 1vli_A Spore coat polysacchari 96.7 0.095 3.3E-06 52.5 18.4 181 116-324 41-248 (385)
54 1h5y_A HISF; histidine biosynt 96.7 0.066 2.3E-06 48.8 16.1 222 103-357 11-251 (253)
55 1p1x_A Deoxyribose-phosphate a 96.6 0.08 2.7E-06 50.3 16.9 194 115-330 24-238 (260)
56 3ngf_A AP endonuclease, family 96.6 0.035 1.2E-06 51.6 14.1 185 121-356 25-241 (269)
57 1to3_A Putative aldolase YIHT; 96.6 0.072 2.5E-06 51.6 16.8 139 176-323 112-253 (304)
58 1ub3_A Aldolase protein; schif 96.6 0.1 3.5E-06 48.3 16.8 177 115-324 15-205 (220)
59 1gvf_A Tagatose-bisphosphate a 96.5 0.085 2.9E-06 50.8 16.3 189 115-323 25-231 (286)
60 1mxs_A KDPG aldolase; 2-keto-3 96.5 0.12 4.2E-06 47.8 16.9 152 117-322 36-193 (225)
61 2wqp_A Polysialic acid capsule 96.5 0.12 4.3E-06 51.0 17.7 179 116-324 32-236 (349)
62 1rpx_A Protein (ribulose-phosp 96.5 0.028 9.6E-07 51.5 12.4 171 119-324 23-207 (230)
63 1tx2_A DHPS, dihydropteroate s 96.5 0.16 5.6E-06 49.1 18.0 200 98-323 43-275 (297)
64 3ndo_A Deoxyribose-phosphate a 96.5 0.12 4E-06 48.3 16.4 192 100-325 16-220 (231)
65 2y5s_A DHPS, dihydropteroate s 96.4 0.27 9.2E-06 47.4 19.4 202 98-324 26-272 (294)
66 2vp8_A Dihydropteroate synthas 96.4 0.09 3.1E-06 51.4 15.8 200 98-323 45-288 (318)
67 2h9a_B CO dehydrogenase/acetyl 96.4 0.059 2E-06 52.5 14.5 142 97-272 50-211 (310)
68 3n9r_A Fructose-bisphosphate a 96.4 0.056 1.9E-06 52.5 14.2 191 115-323 24-254 (307)
69 3o1n_A 3-dehydroquinate dehydr 96.4 0.72 2.5E-05 43.9 24.5 221 97-352 27-272 (276)
70 3k13_A 5-methyltetrahydrofolat 96.4 0.41 1.4E-05 46.3 20.3 235 101-375 19-298 (300)
71 3tr9_A Dihydropteroate synthas 96.3 0.42 1.4E-05 46.5 20.2 204 95-323 28-273 (314)
72 1vhc_A Putative KHG/KDPG aldol 96.3 0.094 3.2E-06 48.6 14.9 153 116-322 26-184 (224)
73 1vcv_A Probable deoxyribose-ph 96.3 0.39 1.3E-05 44.6 18.8 179 115-324 13-220 (226)
74 1f6y_A 5-methyltetrahydrofolat 96.2 0.15 5.3E-06 48.2 16.3 170 105-301 15-199 (262)
75 3kws_A Putative sugar isomeras 96.2 0.64 2.2E-05 43.1 20.5 226 94-375 24-284 (287)
76 1wbh_A KHG/KDPG aldolase; lyas 96.2 0.15 5.1E-06 46.8 15.4 152 117-322 26-183 (214)
77 1k77_A EC1530, hypothetical pr 96.2 0.16 5.4E-06 46.4 15.7 184 123-356 19-234 (260)
78 2yci_X 5-methyltetrahydrofolat 96.1 0.11 3.7E-06 49.6 14.4 173 100-301 16-208 (271)
79 1qtw_A Endonuclease IV; DNA re 96.1 0.64 2.2E-05 42.7 19.6 168 178-376 95-280 (285)
80 3inp_A D-ribulose-phosphate 3- 96.1 0.0073 2.5E-07 57.0 6.0 166 119-322 40-221 (246)
81 2qjg_A Putative aldolase MJ040 96.0 0.43 1.5E-05 44.6 18.1 172 119-323 45-236 (273)
82 3jr2_A Hexulose-6-phosphate sy 96.0 0.041 1.4E-06 50.2 10.4 166 116-322 16-192 (218)
83 3q58_A N-acetylmannosamine-6-p 95.8 0.34 1.2E-05 44.8 16.3 157 116-323 33-209 (229)
84 1mzh_A Deoxyribose-phosphate a 95.8 0.46 1.6E-05 43.7 16.9 172 115-321 16-201 (225)
85 3igs_A N-acetylmannosamine-6-p 95.8 0.41 1.4E-05 44.4 16.5 159 116-323 33-209 (232)
86 4hb7_A Dihydropteroate synthas 95.7 0.65 2.2E-05 44.3 17.9 202 98-322 10-242 (270)
87 2vef_A Dihydropteroate synthas 95.7 0.75 2.6E-05 44.7 18.6 206 97-324 12-284 (314)
88 2a4a_A Deoxyribose-phosphate a 95.5 0.32 1.1E-05 46.7 14.8 200 100-330 35-265 (281)
89 3qja_A IGPS, indole-3-glycerol 95.4 0.43 1.5E-05 45.4 15.6 163 120-321 73-239 (272)
90 3tva_A Xylose isomerase domain 95.4 0.63 2.1E-05 43.2 16.4 143 178-356 108-253 (290)
91 2v82_A 2-dehydro-3-deoxy-6-pho 95.4 0.88 3E-05 40.7 16.8 156 116-323 16-175 (212)
92 3glc_A Aldolase LSRF; TIM barr 95.3 0.52 1.8E-05 45.4 16.0 125 177-323 130-256 (295)
93 4eiv_A Deoxyribose-phosphate a 95.3 1.1 3.8E-05 43.2 18.0 205 100-330 29-271 (297)
94 3qxb_A Putative xylose isomera 95.3 0.35 1.2E-05 45.8 14.8 203 123-356 39-279 (316)
95 1ka9_F Imidazole glycerol phos 95.3 0.63 2.1E-05 42.7 16.0 208 119-359 31-251 (252)
96 1sfl_A 3-dehydroquinate dehydr 95.3 1.8 6.1E-05 40.1 19.0 197 119-351 17-236 (238)
97 3pm6_A Putative fructose-bisph 95.2 0.62 2.1E-05 45.2 16.1 186 115-323 34-250 (306)
98 2qgq_A Protein TM_1862; alpha- 95.2 0.82 2.8E-05 43.6 17.0 143 115-267 32-190 (304)
99 3cu2_A Ribulose-5-phosphate 3- 95.2 0.066 2.3E-06 50.1 8.9 166 122-321 29-214 (237)
100 1q7z_A 5-methyltetrahydrofolat 95.1 0.26 8.9E-06 51.7 14.1 190 101-322 322-536 (566)
101 3ih1_A Methylisocitrate lyase; 95.1 1.8 6.1E-05 41.9 18.9 147 165-321 28-192 (305)
102 2fli_A Ribulose-phosphate 3-ep 95.1 0.38 1.3E-05 43.3 13.4 171 119-324 16-198 (220)
103 3vni_A Xylose isomerase domain 95.1 0.4 1.4E-05 44.6 14.0 189 122-356 20-239 (294)
104 3nvt_A 3-deoxy-D-arabino-heptu 95.0 0.62 2.1E-05 46.6 16.0 178 117-323 154-347 (385)
105 1tqx_A D-ribulose-5-phosphate 95.0 0.2 6.8E-06 46.5 11.5 164 121-322 20-199 (227)
106 1thf_D HISF protein; thermophI 95.0 0.75 2.5E-05 42.2 15.5 206 119-357 30-248 (253)
107 3sz8_A 2-dehydro-3-deoxyphosph 94.9 1 3.4E-05 43.3 16.5 181 117-325 32-244 (285)
108 1vzw_A Phosphoribosyl isomeras 94.8 0.76 2.6E-05 42.0 15.1 173 120-322 33-220 (244)
109 3cqj_A L-ribulose-5-phosphate 94.7 0.74 2.5E-05 42.9 14.8 226 93-356 14-256 (295)
110 1jub_A Dihydroorotate dehydrog 94.7 3.1 0.00011 39.5 20.0 188 122-325 26-272 (311)
111 3lmz_A Putative sugar isomeras 94.6 2 7E-05 39.1 17.5 199 122-375 33-254 (257)
112 1tv8_A MOAA, molybdenum cofact 94.6 1 3.5E-05 43.3 16.1 136 115-263 49-190 (340)
113 3g8r_A Probable spore coat pol 94.5 1.1 3.8E-05 44.2 16.0 133 165-326 91-229 (350)
114 2q02_A Putative cytoplasmic pr 94.5 2.7 9.4E-05 38.1 18.3 199 122-356 22-239 (272)
115 2qul_A D-tagatose 3-epimerase; 94.5 1.3 4.6E-05 40.6 16.0 195 122-356 20-240 (290)
116 3gr7_A NADPH dehydrogenase; fl 94.4 0.82 2.8E-05 44.7 15.0 138 179-322 151-305 (340)
117 3lye_A Oxaloacetate acetyl hyd 94.4 0.67 2.3E-05 45.0 14.0 208 124-354 37-269 (307)
118 2w6r_A Imidazole glycerol phos 94.2 0.72 2.5E-05 42.7 13.5 206 120-355 31-251 (266)
119 1zco_A 2-dehydro-3-deoxyphosph 94.2 2.4 8.3E-05 39.9 17.2 180 116-325 34-230 (262)
120 3fa4_A 2,3-dimethylmalate lyas 94.2 0.64 2.2E-05 45.0 13.3 206 124-354 30-261 (302)
121 3hgj_A Chromate reductase; TIM 94.0 1.2 4E-05 43.6 15.1 138 179-322 159-316 (349)
122 3aam_A Endonuclease IV, endoiv 94.0 1.4 4.8E-05 40.3 14.9 196 120-355 15-240 (270)
123 3n9r_A Fructose-bisphosphate a 94.0 0.24 8.3E-06 48.1 9.9 118 215-353 5-127 (307)
124 1yxy_A Putative N-acetylmannos 94.0 1.3 4.4E-05 40.3 14.4 157 120-322 37-213 (234)
125 1z41_A YQJM, probable NADH-dep 93.9 1.5 5E-05 42.7 15.6 139 178-323 150-306 (338)
126 2yr1_A 3-dehydroquinate dehydr 93.9 4.2 0.00014 38.1 20.2 220 98-353 8-252 (257)
127 3qc0_A Sugar isomerase; TIM ba 93.9 0.78 2.7E-05 41.9 12.9 213 97-356 6-242 (275)
128 1y0e_A Putative N-acetylmannos 93.9 3.5 0.00012 36.9 19.2 162 117-323 21-203 (223)
129 2tps_A Protein (thiamin phosph 93.7 1.1 3.9E-05 40.2 13.5 156 121-324 33-200 (227)
130 3rys_A Adenosine deaminase 1; 93.7 2.7 9.3E-05 41.1 17.1 132 178-322 87-222 (343)
131 1olt_A Oxygen-independent copr 93.7 0.56 1.9E-05 47.5 12.4 85 175-267 153-239 (457)
132 3aal_A Probable endonuclease 4 93.6 4.6 0.00016 37.6 18.3 201 121-355 20-255 (303)
133 1ujp_A Tryptophan synthase alp 93.6 1.2 4E-05 42.3 13.8 169 116-321 27-226 (271)
134 2gou_A Oxidoreductase, FMN-bin 93.6 1.1 3.6E-05 44.3 14.0 140 179-323 168-321 (365)
135 3iwp_A Copper homeostasis prot 93.6 2.9 9.9E-05 40.1 16.4 177 165-369 39-228 (287)
136 2ekc_A AQ_1548, tryptophan syn 93.5 1.8 6.3E-05 40.5 15.0 101 216-323 5-128 (262)
137 3eoo_A Methylisocitrate lyase; 93.4 4.8 0.00017 38.7 18.0 146 166-321 22-188 (298)
138 1vs1_A 3-deoxy-7-phosphoheptul 93.4 4.1 0.00014 38.7 17.3 179 117-325 50-245 (276)
139 3r2g_A Inosine 5'-monophosphat 93.4 0.7 2.4E-05 45.8 12.3 72 248-326 99-171 (361)
140 3mcm_A 2-amino-4-hydroxy-6-hyd 93.4 1.2 4.1E-05 45.3 14.1 154 95-273 191-371 (442)
141 1qwg_A PSL synthase;, (2R)-pho 93.3 0.67 2.3E-05 43.7 11.3 149 182-354 35-198 (251)
142 1vr6_A Phospho-2-dehydro-3-deo 93.2 4.1 0.00014 40.1 17.3 180 117-326 118-314 (350)
143 2hk0_A D-psicose 3-epimerase; 93.1 3 0.0001 39.0 15.9 209 97-356 22-258 (309)
144 2isw_A Putative fructose-1,6-b 93.1 0.61 2.1E-05 45.5 11.0 119 215-354 6-129 (323)
145 2a4a_A Deoxyribose-phosphate a 93.1 2.1 7E-05 41.0 14.5 109 233-351 92-210 (281)
146 2y88_A Phosphoribosyl isomeras 93.0 1.3 4.3E-05 40.4 12.8 173 120-322 32-223 (244)
147 3fok_A Uncharacterized protein 93.0 0.42 1.4E-05 46.3 9.6 175 118-323 70-272 (307)
148 3b0p_A TRNA-dihydrouridine syn 92.9 2.1 7.1E-05 41.9 14.7 147 169-324 63-225 (350)
149 3elf_A Fructose-bisphosphate a 92.9 0.95 3.2E-05 44.7 12.2 197 115-323 28-275 (349)
150 3obe_A Sugar phosphate isomera 92.8 3.7 0.00013 38.7 16.1 120 97-230 22-167 (305)
151 3r12_A Deoxyribose-phosphate a 92.7 1.9 6.5E-05 40.8 13.6 108 234-352 98-212 (260)
152 2r14_A Morphinone reductase; H 92.6 1.1 3.7E-05 44.5 12.5 140 179-323 173-327 (377)
153 1ep3_A Dihydroorotate dehydrog 92.4 0.94 3.2E-05 42.9 11.3 89 226-325 98-197 (311)
154 3l5l_A Xenobiotic reductase A; 92.4 1.5 5.1E-05 43.2 13.1 138 179-322 165-323 (363)
155 2e6f_A Dihydroorotate dehydrog 92.4 7.5 0.00026 36.8 19.6 186 123-324 29-273 (314)
156 3iwp_A Copper homeostasis prot 92.3 3.5 0.00012 39.5 15.0 175 124-328 51-242 (287)
157 1rd5_A Tryptophan synthase alp 92.3 7 0.00024 36.1 17.0 95 217-324 7-125 (262)
158 3q94_A Fructose-bisphosphate a 92.3 0.77 2.6E-05 44.1 10.4 102 216-330 10-118 (288)
159 1gvf_A Tagatose-bisphosphate a 92.2 0.98 3.4E-05 43.4 11.1 117 216-354 7-128 (286)
160 3dx5_A Uncharacterized protein 92.1 0.88 3E-05 42.0 10.5 227 122-375 18-274 (286)
161 3l23_A Sugar phosphate isomera 92.0 2.7 9.3E-05 39.6 14.0 119 97-230 14-163 (303)
162 2ze3_A DFA0005; organic waste 92.0 2.4 8.2E-05 40.3 13.5 145 168-321 18-185 (275)
163 3vnd_A TSA, tryptophan synthas 92.0 2.2 7.6E-05 40.4 13.2 109 214-329 4-135 (267)
164 1xg4_A Probable methylisocitra 91.9 6 0.0002 38.0 16.3 147 166-321 17-184 (295)
165 3iv3_A Tagatose 1,6-diphosphat 91.8 5.9 0.0002 38.7 16.3 134 177-318 115-272 (332)
166 1vyr_A Pentaerythritol tetrani 91.8 2.8 9.6E-05 41.3 14.2 121 207-328 75-275 (364)
167 3nav_A Tryptophan synthase alp 91.8 4 0.00014 38.7 14.7 108 214-328 6-136 (271)
168 3l21_A DHDPS, dihydrodipicolin 91.8 1 3.5E-05 43.3 10.8 82 243-324 31-117 (304)
169 3pao_A Adenosine deaminase; st 91.6 2.8 9.7E-05 40.6 13.8 131 179-322 85-219 (326)
170 4ab4_A Xenobiotic reductase B; 91.6 2.6 8.8E-05 41.6 13.7 133 179-322 160-306 (362)
171 1vyr_A Pentaerythritol tetrani 91.6 2.4 8.2E-05 41.8 13.5 139 179-323 168-322 (364)
172 2pgf_A Adenosine deaminase; me 91.6 8.2 0.00028 37.8 17.4 132 177-321 120-259 (371)
173 1xi3_A Thiamine phosphate pyro 91.6 2.1 7.3E-05 37.8 12.1 158 120-324 27-190 (215)
174 2zvr_A Uncharacterized protein 91.6 7.7 0.00026 35.7 16.4 191 118-356 40-257 (290)
175 3bdk_A D-mannonate dehydratase 91.5 4.8 0.00016 40.0 15.7 19 338-356 306-324 (386)
176 3eoo_A Methylisocitrate lyase; 91.5 2.1 7.3E-05 41.2 12.6 208 125-354 35-261 (298)
177 3qm3_A Fructose-bisphosphate a 91.5 2.3 7.9E-05 42.0 13.1 197 115-323 39-286 (357)
178 2c6q_A GMP reductase 2; TIM ba 91.4 0.82 2.8E-05 45.0 9.9 70 252-327 121-192 (351)
179 1ydn_A Hydroxymethylglutaryl-C 91.4 0.6 2E-05 44.5 8.6 73 245-324 23-99 (295)
180 3lgd_A Adenosine deaminase CEC 91.4 2.2 7.4E-05 44.2 13.3 140 179-324 207-359 (508)
181 1rvg_A Fructose-1,6-bisphospha 91.4 0.83 2.9E-05 44.2 9.6 116 215-353 5-125 (305)
182 3gka_A N-ethylmaleimide reduct 91.4 2.7 9.3E-05 41.4 13.6 133 179-322 168-314 (361)
183 1vrd_A Inosine-5'-monophosphat 91.3 0.83 2.8E-05 46.6 10.1 72 250-327 238-309 (494)
184 3oa3_A Aldolase; structural ge 91.3 2.8 9.6E-05 40.2 13.0 140 178-351 80-226 (288)
185 3fs2_A 2-dehydro-3-deoxyphosph 91.2 4.8 0.00016 38.8 14.7 179 117-325 53-263 (298)
186 3ih1_A Methylisocitrate lyase; 91.2 3.2 0.00011 40.1 13.6 204 124-354 41-265 (305)
187 1m5w_A Pyridoxal phosphate bio 91.2 0.6 2E-05 43.7 8.0 118 153-286 113-238 (243)
188 1q7z_A 5-methyltetrahydrofolat 91.2 9 0.00031 40.0 18.0 218 116-366 119-396 (566)
189 1f8m_A Isocitrate lyase, ICL; 91.2 2 7E-05 43.4 12.5 198 177-391 168-403 (429)
190 4djd_D C/Fe-SP, corrinoid/iron 91.1 2.1 7.3E-05 41.7 12.3 142 120-288 81-236 (323)
191 3lye_A Oxaloacetate acetyl hyd 91.1 6.9 0.00024 37.8 15.8 150 164-321 23-195 (307)
192 2qiw_A PEP phosphonomutase; st 91.1 1.5 5E-05 41.4 10.8 145 166-322 20-186 (255)
193 1dos_A Aldolase class II; lyas 91.0 12 0.00041 36.9 17.7 195 115-323 36-287 (358)
194 1zlp_A PSR132, petal death pro 91.0 5.9 0.0002 38.5 15.2 147 166-321 39-206 (318)
195 1eep_A Inosine 5'-monophosphat 90.9 0.84 2.9E-05 45.5 9.5 68 251-325 155-223 (404)
196 1o60_A 2-dehydro-3-deoxyphosph 90.8 12 0.0004 35.9 17.3 182 116-325 29-242 (292)
197 3kru_A NADH:flavin oxidoreduct 90.8 4.4 0.00015 39.6 14.4 135 179-321 150-304 (343)
198 3eol_A Isocitrate lyase; seatt 90.8 1.4 4.8E-05 44.6 10.9 199 177-391 165-402 (433)
199 3gr7_A NADPH dehydrogenase; fl 90.8 3.6 0.00012 40.1 13.7 118 210-329 80-254 (340)
200 1icp_A OPR1, 12-oxophytodienoa 90.7 2.9 0.0001 41.3 13.1 120 206-326 84-278 (376)
201 2z6i_A Trans-2-enoyl-ACP reduc 90.7 6.2 0.00021 38.0 15.2 154 122-324 26-191 (332)
202 2x7v_A Probable endonuclease 4 90.6 4.5 0.00015 36.9 13.7 199 122-353 15-250 (287)
203 3dz1_A Dihydrodipicolinate syn 90.6 1.6 5.6E-05 42.0 11.0 98 243-351 24-125 (313)
204 3tak_A DHDPS, dihydrodipicolin 90.6 1.3 4.5E-05 42.2 10.2 82 243-324 17-103 (291)
205 2vp8_A Dihydropteroate synthas 90.6 0.9 3.1E-05 44.3 9.1 74 246-324 63-144 (318)
206 1p1x_A Deoxyribose-phosphate a 90.6 4.9 0.00017 37.9 13.9 135 233-377 71-226 (260)
207 1zlp_A PSR132, petal death pro 90.6 5.9 0.0002 38.4 14.8 205 124-354 51-279 (318)
208 3flu_A DHDPS, dihydrodipicolin 90.5 1.6 5.4E-05 41.8 10.7 82 243-324 23-109 (297)
209 1z41_A YQJM, probable NADH-dep 90.5 3.9 0.00013 39.7 13.6 118 208-327 78-252 (338)
210 1nvm_A HOA, 4-hydroxy-2-oxoval 90.5 2 6.8E-05 41.9 11.6 120 244-374 26-161 (345)
211 1ypf_A GMP reductase; GUAC, pu 90.4 2.4 8.2E-05 41.1 12.1 93 217-326 85-179 (336)
212 3tml_A 2-dehydro-3-deoxyphosph 90.4 4.8 0.00016 38.6 13.8 179 117-325 29-245 (288)
213 3igs_A N-acetylmannosamine-6-p 90.4 1.7 5.8E-05 40.1 10.4 68 254-329 94-161 (232)
214 3tsm_A IGPS, indole-3-glycerol 90.4 12 0.00042 35.3 19.3 158 120-321 80-246 (272)
215 3gk0_A PNP synthase, pyridoxin 90.4 0.71 2.4E-05 43.9 7.8 120 153-288 141-268 (278)
216 3ngj_A Deoxyribose-phosphate a 90.3 7.4 0.00025 36.3 14.7 107 234-351 82-195 (239)
217 2hsa_B 12-oxophytodienoate red 90.3 6.6 0.00023 39.2 15.4 140 179-323 178-347 (402)
218 3i4e_A Isocitrate lyase; struc 90.2 5.7 0.00019 40.3 14.7 167 177-354 172-374 (439)
219 3iix_A Biotin synthetase, puta 90.1 13 0.00045 35.3 17.7 123 245-374 84-220 (348)
220 2qw5_A Xylose isomerase-like T 90.1 4.5 0.00016 38.3 13.6 135 208-356 104-275 (335)
221 2p10_A MLL9387 protein; putati 90.0 6.5 0.00022 37.6 14.2 157 122-288 111-280 (286)
222 3cny_A Inositol catabolism pro 90.0 2.4 8.2E-05 39.1 11.3 197 122-356 34-267 (301)
223 3dz1_A Dihydrodipicolinate syn 89.9 3.8 0.00013 39.4 12.9 98 178-298 67-169 (313)
224 4avf_A Inosine-5'-monophosphat 89.8 3.1 0.00011 42.6 12.9 131 119-270 228-363 (490)
225 3fkr_A L-2-keto-3-deoxyarabona 89.8 1.4 4.8E-05 42.4 9.7 82 243-324 24-110 (309)
226 2hjp_A Phosphonopyruvate hydro 89.8 12 0.0004 35.8 16.1 146 166-321 15-183 (290)
227 3b8i_A PA4872 oxaloacetate dec 89.8 4.8 0.00017 38.5 13.3 146 166-321 21-185 (287)
228 3noy_A 4-hydroxy-3-methylbut-2 89.8 3.9 0.00013 40.4 12.8 93 244-355 42-134 (366)
229 4avf_A Inosine-5'-monophosphat 89.8 1.8 6.2E-05 44.4 11.0 69 251-325 231-299 (490)
230 4fxs_A Inosine-5'-monophosphat 89.7 2.3 8E-05 43.6 11.8 70 251-326 233-302 (496)
231 2r14_A Morphinone reductase; H 89.7 4.5 0.00015 40.0 13.5 118 208-326 80-277 (377)
232 3b4u_A Dihydrodipicolinate syn 89.6 3.8 0.00013 39.0 12.6 78 216-303 88-175 (294)
233 3inp_A D-ribulose-phosphate 3- 89.6 0.79 2.7E-05 43.0 7.5 76 245-324 37-116 (246)
234 3fa4_A 2,3-dimethylmalate lyas 89.6 8.1 0.00028 37.2 14.8 149 164-321 16-187 (302)
235 3s5o_A 4-hydroxy-2-oxoglutarat 89.5 1.9 6.4E-05 41.5 10.3 82 243-324 30-116 (307)
236 1bxb_A Xylose isomerase; xylos 89.5 2.9 0.0001 41.0 12.0 121 178-304 122-250 (387)
237 3m5v_A DHDPS, dihydrodipicolin 89.5 6.2 0.00021 37.6 14.0 15 338-352 213-227 (301)
238 3m5v_A DHDPS, dihydrodipicolin 89.5 1.5 5.3E-05 41.9 9.7 82 243-324 23-110 (301)
239 2gou_A Oxidoreductase, FMN-bin 89.5 4.4 0.00015 39.8 13.2 121 207-328 75-274 (365)
240 4fxs_A Inosine-5'-monophosphat 89.5 3.1 0.00011 42.7 12.5 129 120-269 231-364 (496)
241 2ze3_A DFA0005; organic waste 89.4 5 0.00017 38.1 13.1 201 124-354 28-254 (275)
242 3iar_A Adenosine deaminase; pu 89.4 12 0.00041 36.9 16.3 132 179-323 85-235 (367)
243 2wkj_A N-acetylneuraminate lya 89.3 5.6 0.00019 38.0 13.6 14 338-351 216-229 (303)
244 1viz_A PCRB protein homolog; s 89.2 6.1 0.00021 36.8 13.3 169 122-321 23-207 (240)
245 3aty_A Tcoye, prostaglandin F2 89.1 6.5 0.00022 38.9 14.2 136 179-323 181-335 (379)
246 3ovp_A Ribulose-phosphate 3-ep 89.1 0.45 1.6E-05 44.0 5.4 97 245-357 14-115 (228)
247 3q58_A N-acetylmannosamine-6-p 89.0 1.3 4.5E-05 40.8 8.5 68 254-329 94-161 (229)
248 3qfe_A Putative dihydrodipicol 89.0 1.7 5.8E-05 42.0 9.6 81 243-323 27-112 (318)
249 2a5h_A L-lysine 2,3-aminomutas 88.9 19 0.00066 35.8 17.6 157 115-292 144-321 (416)
250 3ffs_A Inosine-5-monophosphate 88.8 4.1 0.00014 40.8 12.5 126 122-269 146-276 (400)
251 1u83_A Phosphosulfolactate syn 88.8 0.64 2.2E-05 44.3 6.2 140 182-346 62-213 (276)
252 4fo4_A Inosine 5'-monophosphat 88.7 2.5 8.5E-05 41.9 10.8 68 251-324 110-177 (366)
253 2fiq_A Putative tagatose 6-pho 88.7 4.5 0.00015 40.8 12.7 201 98-322 40-279 (420)
254 4dpp_A DHDPS 2, dihydrodipicol 88.7 2.6 8.8E-05 41.7 10.8 100 242-351 74-178 (360)
255 2qiw_A PEP phosphonomutase; st 88.6 4 0.00014 38.3 11.6 151 123-285 31-202 (255)
256 3qtg_A Pyruvate kinase, PK; TI 88.6 23 0.00079 36.1 18.1 225 115-355 178-418 (461)
257 4gxw_A Adenosine deaminase; am 88.5 20 0.00069 35.4 18.7 137 179-326 103-244 (380)
258 3ktc_A Xylose isomerase; putat 88.5 6.5 0.00022 37.3 13.4 197 122-356 36-265 (333)
259 3si9_A DHDPS, dihydrodipicolin 88.5 2.2 7.7E-05 41.2 10.1 82 243-324 38-124 (315)
260 2f6u_A GGGPS, (S)-3-O-geranylg 88.5 3.6 0.00012 38.2 11.1 172 122-321 23-215 (234)
261 3khj_A Inosine-5-monophosphate 88.5 7.5 0.00026 38.2 14.1 68 251-325 107-174 (361)
262 2bmb_A Folic acid synthesis pr 88.4 26 0.00089 36.4 21.3 167 98-288 228-457 (545)
263 3daq_A DHDPS, dihydrodipicolin 88.4 2.2 7.4E-05 40.7 9.8 81 244-324 19-104 (292)
264 3hgj_A Chromate reductase; TIM 88.3 5.9 0.0002 38.6 13.1 121 209-329 77-264 (349)
265 1mzh_A Deoxyribose-phosphate a 88.2 9.6 0.00033 34.7 13.8 88 237-325 60-153 (225)
266 3ayv_A Putative uncharacterize 88.1 2.5 8.5E-05 38.3 9.7 127 116-257 7-153 (254)
267 2h9a_A Carbon monoxide dehydro 88.1 3.5 0.00012 42.0 11.5 154 133-323 128-292 (445)
268 1qwg_A PSL synthase;, (2R)-pho 88.0 4.1 0.00014 38.3 11.1 171 123-319 27-244 (251)
269 3tak_A DHDPS, dihydrodipicolin 88.0 8.5 0.00029 36.4 13.7 76 217-303 87-167 (291)
270 3flu_A DHDPS, dihydrodipicolin 87.9 13 0.00044 35.3 15.0 14 338-351 212-225 (297)
271 1y0e_A Putative N-acetylmannos 87.9 4.1 0.00014 36.4 11.0 71 254-330 81-152 (223)
272 3tdn_A FLR symmetric alpha-bet 87.9 1.7 5.8E-05 39.9 8.5 71 120-192 36-108 (247)
273 4fo4_A Inosine 5'-monophosphat 87.9 15 0.00052 36.1 15.9 126 122-269 110-241 (366)
274 3u0h_A Xylose isomerase domain 87.8 1.6 5.6E-05 39.8 8.3 200 123-356 20-244 (281)
275 3pm6_A Putative fructose-bisph 87.7 2.4 8.1E-05 41.1 9.6 117 215-353 15-143 (306)
276 3qze_A DHDPS, dihydrodipicolin 87.7 2.4 8.3E-05 40.9 9.8 82 243-324 39-125 (314)
277 1ub3_A Aldolase protein; schif 87.6 8.4 0.00029 35.3 12.9 107 234-351 58-171 (220)
278 3qze_A DHDPS, dihydrodipicolin 87.6 11 0.00038 36.2 14.4 15 338-352 228-242 (314)
279 1yxy_A Putative N-acetylmannos 87.6 1.4 5E-05 39.9 7.8 72 252-329 92-165 (234)
280 2wkj_A N-acetylneuraminate lya 87.6 3.6 0.00012 39.4 10.9 82 243-324 27-113 (303)
281 1fob_A Beta-1,4-galactanase; B 87.6 8.6 0.00029 37.1 13.7 144 176-327 31-216 (334)
282 3p6l_A Sugar phosphate isomera 87.6 14 0.00047 33.3 14.5 219 97-375 11-258 (262)
283 1ur4_A Galactanase; hydrolase, 87.6 24 0.00083 35.1 18.1 126 176-304 52-208 (399)
284 3ndo_A Deoxyribose-phosphate a 87.5 18 0.0006 33.5 16.1 108 235-352 68-186 (231)
285 1yx1_A Hypothetical protein PA 87.5 4.4 0.00015 36.9 11.1 156 122-304 26-195 (264)
286 3b4u_A Dihydrodipicolinate syn 87.4 3.7 0.00013 39.1 10.8 82 243-324 19-105 (294)
287 1xg4_A Probable methylisocitra 87.4 4.3 0.00015 39.0 11.3 207 124-354 29-257 (295)
288 1vcv_A Probable deoxyribose-ph 87.4 12 0.00041 34.4 13.9 144 178-352 23-177 (226)
289 3e96_A Dihydrodipicolinate syn 87.4 2 6.7E-05 41.5 8.9 99 243-351 28-130 (316)
290 1ps9_A 2,4-dienoyl-COA reducta 87.3 8.4 0.00029 40.5 14.5 140 178-324 147-310 (671)
291 1s2w_A Phosphoenolpyruvate pho 87.3 8.1 0.00028 37.0 13.1 210 124-354 31-260 (295)
292 3m0z_A Putative aldolase; MCSG 87.2 1.7 5.8E-05 40.4 7.8 90 179-290 152-248 (249)
293 1xky_A Dihydrodipicolinate syn 87.2 3.3 0.00011 39.6 10.3 82 243-324 28-114 (301)
294 3txv_A Probable tagatose 6-pho 87.1 9.1 0.00031 38.9 13.8 109 212-330 5-139 (450)
295 1s2w_A Phosphoenolpyruvate pho 87.1 14 0.00047 35.4 14.6 146 166-321 19-187 (295)
296 1icp_A OPR1, 12-oxophytodienoa 87.1 4.9 0.00017 39.7 11.8 140 179-323 174-329 (376)
297 3h5d_A DHDPS, dihydrodipicolin 87.0 2.8 9.6E-05 40.3 9.8 82 243-324 23-110 (311)
298 1ps9_A 2,4-dienoyl-COA reducta 87.0 3.2 0.00011 43.8 11.0 116 209-325 77-249 (671)
299 1ceo_A Cellulase CELC; glycosy 87.0 5.4 0.00019 37.9 11.8 126 174-299 30-173 (343)
300 3khj_A Inosine-5-monophosphate 87.0 6.2 0.00021 38.8 12.4 127 122-269 107-237 (361)
301 3na8_A Putative dihydrodipicol 86.9 10 0.00036 36.4 13.8 15 338-352 230-244 (315)
302 3usb_A Inosine-5'-monophosphat 86.9 6.1 0.00021 40.6 12.8 129 120-269 256-389 (511)
303 3bo9_A Putative nitroalkan dio 86.9 22 0.00076 34.0 16.8 155 122-325 40-206 (326)
304 3na8_A Putative dihydrodipicol 86.8 2.9 9.8E-05 40.4 9.7 82 243-324 40-126 (315)
305 3w01_A Heptaprenylglyceryl pho 86.7 14 0.00047 34.3 13.9 166 123-321 27-211 (235)
306 3zwt_A Dihydroorotate dehydrog 86.7 8.3 0.00028 38.0 13.2 105 210-325 199-328 (367)
307 1gte_A Dihydropyrimidine dehyd 86.6 3.2 0.00011 46.3 11.3 135 178-325 654-817 (1025)
308 3usb_A Inosine-5'-monophosphat 86.6 4.7 0.00016 41.5 11.8 67 251-323 258-324 (511)
309 2r8w_A AGR_C_1641P; APC7498, d 86.6 3.6 0.00012 40.0 10.3 82 243-324 50-136 (332)
310 4hb7_A Dihydropteroate synthas 86.5 8.8 0.0003 36.4 12.6 123 178-325 36-173 (270)
311 1eye_A DHPS 1, dihydropteroate 86.4 4 0.00014 38.8 10.3 74 245-325 26-108 (280)
312 1xm3_A Thiazole biosynthesis p 86.3 1.6 5.6E-05 40.9 7.5 165 123-321 27-204 (264)
313 1qop_A Tryptophan synthase alp 86.3 21 0.00072 33.1 15.5 102 216-324 5-129 (268)
314 1vc4_A Indole-3-glycerol phosp 86.2 9.4 0.00032 35.6 12.6 115 119-268 65-181 (254)
315 2zds_A Putative DNA-binding pr 86.2 8 0.00027 36.2 12.4 177 178-376 117-319 (340)
316 3d0c_A Dihydrodipicolinate syn 86.0 2.9 9.9E-05 40.3 9.3 82 243-324 28-113 (314)
317 1aj0_A DHPS, dihydropteroate s 86.0 2.1 7.2E-05 40.9 8.1 72 246-323 36-116 (282)
318 1o66_A 3-methyl-2-oxobutanoate 86.0 17 0.00058 34.5 14.4 140 165-321 16-178 (275)
319 3m6y_A 4-hydroxy-2-oxoglutarat 86.0 1.7 5.9E-05 40.8 7.2 90 179-290 175-271 (275)
320 1xky_A Dihydrodipicolinate syn 86.0 18 0.00063 34.3 14.9 14 338-351 217-230 (301)
321 2v9d_A YAGE; dihydrodipicolini 86.0 3.8 0.00013 40.1 10.2 82 243-324 47-133 (343)
322 3cpr_A Dihydrodipicolinate syn 85.9 4.5 0.00015 38.7 10.5 82 243-324 32-118 (304)
323 3l21_A DHDPS, dihydrodipicolin 85.9 12 0.00041 35.7 13.6 14 338-351 218-231 (304)
324 3si9_A DHDPS, dihydrodipicolin 85.9 16 0.00054 35.1 14.5 15 338-352 228-242 (315)
325 1qo2_A Molecule: N-((5-phospho 85.8 3.9 0.00013 37.2 9.7 172 119-316 30-209 (241)
326 1jcn_A Inosine monophosphate d 85.8 4.2 0.00014 41.7 10.9 70 250-325 256-325 (514)
327 2yxg_A DHDPS, dihydrodipicolin 85.7 15 0.00051 34.7 14.0 76 217-302 86-166 (289)
328 2ehh_A DHDPS, dihydrodipicolin 85.6 3.3 0.00011 39.4 9.4 82 243-324 16-102 (294)
329 2nuw_A 2-keto-3-deoxygluconate 85.6 3.5 0.00012 39.1 9.6 81 243-324 15-98 (288)
330 2yxg_A DHDPS, dihydrodipicolin 85.6 3.5 0.00012 39.1 9.5 82 243-324 16-102 (289)
331 4gj1_A 1-(5-phosphoribosyl)-5- 85.6 9.2 0.00032 35.3 12.2 197 120-351 32-242 (243)
332 2r91_A 2-keto-3-deoxy-(6-phosp 85.5 4.2 0.00014 38.5 10.0 81 243-324 14-97 (286)
333 3a5f_A Dihydrodipicolinate syn 85.4 4 0.00014 38.7 9.9 81 243-324 18-103 (291)
334 3civ_A Endo-beta-1,4-mannanase 85.3 8.6 0.00029 37.5 12.4 121 177-300 58-205 (343)
335 1f6k_A N-acetylneuraminate lya 85.3 4.4 0.00015 38.5 10.1 82 243-324 19-106 (293)
336 1tx2_A DHPS, dihydropteroate s 85.2 4.9 0.00017 38.6 10.3 72 246-323 61-141 (297)
337 3l5l_A Xenobiotic reductase A; 85.1 8.5 0.00029 37.7 12.3 124 205-328 72-270 (363)
338 3lmz_A Putative sugar isomeras 85.1 18 0.00062 32.6 13.9 102 176-301 34-135 (257)
339 2r8w_A AGR_C_1641P; APC7498, d 85.0 14 0.00049 35.7 13.7 75 217-302 120-199 (332)
340 1w3i_A EDA, 2-keto-3-deoxy glu 84.9 3.7 0.00013 39.0 9.4 81 243-324 15-98 (293)
341 2cw6_A Hydroxymethylglutaryl-C 84.8 2.7 9.1E-05 40.1 8.3 32 194-229 12-43 (298)
342 1twd_A Copper homeostasis prot 84.7 17 0.0006 34.1 13.6 136 168-324 4-148 (256)
343 2bdq_A Copper homeostasis prot 84.7 16 0.00056 33.6 13.2 166 130-324 19-207 (224)
344 3daq_A DHDPS, dihydrodipicolin 84.7 16 0.00055 34.5 13.7 15 338-352 208-222 (292)
345 3lg3_A Isocitrate lyase; conse 84.6 4.2 0.00014 41.1 9.9 163 177-352 172-372 (435)
346 3fst_A 5,10-methylenetetrahydr 84.6 29 0.00099 33.2 19.5 172 178-381 45-233 (304)
347 3ajx_A 3-hexulose-6-phosphate 84.6 2.7 9.2E-05 37.2 7.8 74 245-325 10-85 (207)
348 2ftp_A Hydroxymethylglutaryl-C 84.5 3.8 0.00013 39.1 9.2 37 315-356 135-174 (302)
349 3eb2_A Putative dihydrodipicol 84.4 2.3 8E-05 40.7 7.7 82 243-324 20-106 (300)
350 2r91_A 2-keto-3-deoxy-(6-phosp 84.4 12 0.00042 35.2 12.7 14 338-351 197-210 (286)
351 2qkf_A 3-deoxy-D-manno-octulos 84.4 21 0.00071 33.8 14.3 180 117-325 27-239 (280)
352 4eiv_A Deoxyribose-phosphate a 84.3 5.7 0.0002 38.2 10.2 109 233-351 86-204 (297)
353 3o6c_A PNP synthase, pyridoxin 84.3 2.4 8.2E-05 40.0 7.4 67 164-230 123-210 (260)
354 2v9d_A YAGE; dihydrodipicolini 84.2 15 0.00053 35.7 13.7 78 216-303 116-198 (343)
355 3l23_A Sugar phosphate isomera 84.2 19 0.00064 33.7 13.9 113 177-301 34-168 (303)
356 3tva_A Xylose isomerase domain 84.2 16 0.00054 33.4 13.2 125 176-314 25-174 (290)
357 2ojp_A DHDPS, dihydrodipicolin 84.1 3 0.0001 39.7 8.3 82 243-324 17-103 (292)
358 3lab_A Putative KDPG (2-keto-3 84.1 3.6 0.00012 37.9 8.4 68 245-321 22-89 (217)
359 1e0t_A Pyruvate kinase, PK; ph 84.1 40 0.0014 34.4 17.4 249 115-380 169-445 (470)
360 1ydo_A HMG-COA lyase; TIM-barr 83.9 5.6 0.00019 38.2 10.2 74 245-325 25-102 (307)
361 1zfj_A Inosine monophosphate d 83.8 3.9 0.00013 41.4 9.5 69 251-325 235-303 (491)
362 1o5k_A DHDPS, dihydrodipicolin 83.8 20 0.00068 34.2 14.0 78 216-303 97-179 (306)
363 3fkr_A L-2-keto-3-deoxyarabona 83.7 20 0.00069 34.2 14.1 72 216-298 93-171 (309)
364 2eja_A URO-D, UPD, uroporphyri 83.7 3.1 0.00011 40.0 8.4 66 252-323 183-258 (338)
365 1gte_A Dihydropyrimidine dehyd 83.6 14 0.00048 41.1 14.6 79 245-324 645-735 (1025)
366 3m47_A Orotidine 5'-phosphate 83.6 5.5 0.00019 36.5 9.6 164 123-323 26-201 (228)
367 1i60_A IOLI protein; beta barr 83.6 19 0.00066 32.3 13.4 196 122-356 17-240 (278)
368 1hjs_A Beta-1,4-galactanase; 4 83.5 13 0.00046 35.8 12.8 118 176-301 31-181 (332)
369 1o5k_A DHDPS, dihydrodipicolin 83.4 4.1 0.00014 39.1 8.9 83 242-324 27-114 (306)
370 3vii_A Beta-glucosidase; cellu 83.4 2.5 8.5E-05 43.5 7.8 84 175-259 69-160 (487)
371 3vav_A 3-methyl-2-oxobutanoate 83.4 16 0.00055 34.7 12.9 119 165-299 28-149 (275)
372 1xim_A D-xylose isomerase; iso 83.3 4.8 0.00016 39.6 9.7 209 122-362 36-291 (393)
373 3d0c_A Dihydrodipicolinate syn 83.3 13 0.00043 35.7 12.5 62 216-283 96-158 (314)
374 1jub_A Dihydroorotate dehydrog 83.3 16 0.00055 34.4 13.1 79 245-324 103-192 (311)
375 3t7v_A Methylornithine synthas 83.3 8 0.00027 37.1 11.1 121 245-374 91-229 (350)
376 3kru_A NADH:flavin oxidoreduct 83.3 14 0.00049 35.9 12.9 122 205-328 73-253 (343)
377 3p6l_A Sugar phosphate isomera 83.3 25 0.00087 31.5 14.5 110 176-303 26-139 (262)
378 4djd_C C/Fe-SP, corrinoid/iron 83.2 15 0.00053 37.2 13.3 143 151-321 138-291 (446)
379 1wa3_A 2-keto-3-deoxy-6-phosph 83.0 2.2 7.4E-05 37.8 6.4 68 245-321 19-87 (205)
380 2hsa_B 12-oxophytodienoate red 82.9 15 0.00052 36.5 13.2 120 207-327 87-289 (402)
381 2rfg_A Dihydrodipicolinate syn 82.9 3.7 0.00013 39.1 8.4 82 243-324 16-102 (297)
382 3b8i_A PA4872 oxaloacetate dec 82.7 15 0.00052 35.0 12.6 186 123-328 32-238 (287)
383 2y7e_A 3-keto-5-aminohexanoate 82.7 6.6 0.00023 37.5 10.0 127 244-373 30-165 (282)
384 2vc6_A MOSA, dihydrodipicolina 82.6 3.6 0.00012 39.1 8.2 82 243-324 16-102 (292)
385 3eb2_A Putative dihydrodipicol 82.6 12 0.00041 35.6 12.0 78 216-303 89-170 (300)
386 4e38_A Keto-hydroxyglutarate-a 82.5 6.1 0.00021 36.6 9.4 70 245-323 43-112 (232)
387 1tv8_A MOAA, molybdenum cofact 82.4 8.1 0.00028 36.8 10.7 121 215-356 55-190 (340)
388 2ocz_A 3-dehydroquinate dehydr 82.2 18 0.00061 33.2 12.5 181 132-355 28-227 (231)
389 3ffs_A Inosine-5-monophosphate 82.2 10 0.00036 37.8 11.7 67 251-324 146-212 (400)
390 1vrd_A Inosine-5'-monophosphat 82.1 17 0.00057 36.9 13.5 128 120-268 237-369 (494)
391 1pv8_A Delta-aminolevulinic ac 82.1 3.6 0.00012 39.9 7.8 85 240-324 51-168 (330)
392 3e96_A Dihydrodipicolinate syn 82.0 17 0.00059 34.8 12.8 16 337-352 214-229 (316)
393 2ehh_A DHDPS, dihydrodipicolin 82.0 35 0.0012 32.2 16.0 77 216-302 85-166 (294)
394 3cpr_A Dihydrodipicolinate syn 81.9 33 0.0011 32.5 14.8 15 337-351 218-232 (304)
395 2rfg_A Dihydrodipicolinate syn 81.8 21 0.00073 33.8 13.3 61 217-282 86-150 (297)
396 3b0p_A TRNA-dihydrouridine syn 81.8 8.7 0.0003 37.4 10.8 91 224-324 55-164 (350)
397 3gnh_A L-lysine, L-arginine ca 81.7 6.2 0.00021 37.7 9.7 71 245-322 164-245 (403)
398 3a5f_A Dihydrodipicolinate syn 81.7 13 0.00044 35.2 11.7 61 217-282 87-151 (291)
399 2g0w_A LMO2234 protein; putati 81.7 19 0.00064 33.3 12.7 146 85-257 12-174 (296)
400 3r2g_A Inosine 5'-monophosphat 81.7 20 0.00067 35.3 13.3 69 119-192 99-169 (361)
401 1twd_A Copper homeostasis prot 81.6 22 0.00077 33.3 13.0 168 125-324 14-198 (256)
402 3gg8_A Pyruvate kinase; malari 81.6 21 0.00072 36.8 13.9 255 115-385 204-489 (511)
403 3apt_A Methylenetetrahydrofola 81.5 38 0.0013 32.4 16.9 128 179-326 36-182 (310)
404 2yx0_A Radical SAM enzyme; pre 81.4 37 0.0013 32.2 21.0 153 133-295 142-311 (342)
405 3gd6_A Muconate cycloisomerase 81.4 13 0.00046 36.5 12.1 94 115-230 197-293 (391)
406 4ab4_A Xenobiotic reductase B; 81.4 31 0.001 33.8 14.6 124 205-329 71-267 (362)
407 2pgw_A Muconate cycloisomerase 81.4 16 0.00056 35.6 12.7 95 115-231 200-297 (384)
408 3vzx_A Heptaprenylglyceryl pho 81.4 25 0.00084 32.4 13.1 163 124-321 23-205 (228)
409 2nuw_A 2-keto-3-deoxygluconate 81.2 11 0.00039 35.5 11.1 15 337-351 195-209 (288)
410 4ay7_A Methylcobalamin\: coenz 81.2 4.1 0.00014 39.4 8.2 69 250-322 192-267 (348)
411 2x7v_A Probable endonuclease 4 81.1 11 0.00037 34.3 10.7 122 176-303 16-149 (287)
412 3obe_A Sugar phosphate isomera 81.0 7.6 0.00026 36.5 9.8 120 177-302 41-173 (305)
413 2qr6_A IMP dehydrogenase/GMP r 81.0 7.4 0.00025 38.3 10.1 93 216-325 145-240 (393)
414 3khd_A Pyruvate kinase; malari 80.8 20 0.00068 37.1 13.3 255 115-385 213-498 (520)
415 3vni_A Xylose isomerase domain 80.6 21 0.00071 32.6 12.6 114 177-302 22-155 (294)
416 3f5l_A Beta-glucosidase; beta- 80.6 3.5 0.00012 42.3 7.7 83 175-259 76-167 (481)
417 3bo9_A Putative nitroalkan dio 80.5 41 0.0014 32.1 17.3 144 215-397 65-215 (326)
418 1f6k_A N-acetylneuraminate lya 80.4 39 0.0013 31.8 15.0 76 217-303 90-170 (293)
419 1gnx_A Beta-glucosidase; hydro 80.4 4.8 0.00016 41.3 8.6 83 175-259 74-164 (479)
420 1r3s_A URO-D, uroporphyrinogen 80.4 3.7 0.00013 40.1 7.5 72 248-323 197-282 (367)
421 2zad_A Muconate cycloisomerase 80.4 19 0.00064 34.6 12.6 93 115-230 192-289 (345)
422 3gka_A N-ethylmaleimide reduct 80.4 25 0.00085 34.5 13.5 120 208-328 82-274 (361)
423 3qfe_A Putative dihydrodipicol 80.2 27 0.00094 33.4 13.6 76 217-302 97-180 (318)
424 3aty_A Tcoye, prostaglandin F2 80.0 4.9 0.00017 39.8 8.4 20 210-229 171-191 (379)
425 2vc6_A MOSA, dihydrodipicolina 79.9 40 0.0014 31.7 15.3 77 216-302 85-166 (292)
426 3kws_A Putative sugar isomeras 79.9 20 0.00069 32.7 12.2 110 176-302 42-169 (287)
427 1mxs_A KDPG aldolase; 2-keto-3 79.9 6.3 0.00022 36.1 8.5 88 216-323 17-104 (225)
428 1nu5_A Chloromuconate cycloiso 79.7 14 0.0005 35.7 11.6 94 115-230 198-294 (370)
429 2ojp_A DHDPS, dihydrodipicolin 79.7 41 0.0014 31.6 14.5 14 338-351 206-219 (292)
430 3ble_A Citramalate synthase fr 79.4 5.8 0.0002 38.5 8.6 72 245-324 38-116 (337)
431 3h5d_A DHDPS, dihydrodipicolin 79.4 27 0.00093 33.3 13.3 71 216-297 92-167 (311)
432 1wcg_A Thioglucosidase, myrosi 79.3 4.1 0.00014 41.6 7.7 84 175-259 62-153 (464)
433 3f4w_A Putative hexulose 6 pho 79.3 13 0.00043 32.8 10.2 71 245-323 10-83 (211)
434 3l5a_A NADH/flavin oxidoreduct 79.3 5.5 0.00019 40.0 8.5 142 179-330 177-347 (419)
435 3hqn_D Pyruvate kinase, PK; TI 79.2 43 0.0015 34.4 15.2 253 116-385 190-478 (499)
436 1vff_A Beta-glucosidase; glyco 79.1 4.1 0.00014 41.0 7.6 82 175-259 53-142 (423)
437 1ccw_A Protein (glutamate muta 78.9 22 0.00075 29.6 11.0 100 122-270 21-121 (137)
438 1w3i_A EDA, 2-keto-3-deoxy glu 78.8 15 0.0005 34.8 11.0 60 217-281 82-146 (293)
439 2qul_A D-tagatose 3-epimerase; 78.7 29 0.001 31.4 12.9 78 178-267 23-107 (290)
440 1f76_A Dihydroorotate dehydrog 78.7 23 0.00079 33.8 12.6 76 245-323 222-317 (336)
441 3gnp_A OS03G0212800 protein; b 78.7 4 0.00014 42.0 7.4 83 175-259 73-164 (488)
442 3eeg_A 2-isopropylmalate synth 78.6 29 0.001 33.4 13.3 75 245-323 25-100 (325)
443 1i60_A IOLI protein; beta barr 78.5 5.1 0.00017 36.2 7.5 115 177-303 19-147 (278)
444 3e49_A Uncharacterized protein 78.5 17 0.00058 35.1 11.4 129 244-373 28-188 (311)
445 4g9p_A 4-hydroxy-3-methylbut-2 78.5 57 0.002 32.6 16.4 189 116-328 35-266 (406)
446 4drs_A Pyruvate kinase; glycol 78.3 21 0.00072 37.0 12.7 251 115-383 212-502 (526)
447 3i4k_A Muconate lactonizing en 78.2 14 0.00046 36.3 10.9 94 115-230 204-300 (383)
448 3kts_A Glycerol uptake operon 78.1 3.1 0.00011 37.6 5.7 152 147-328 13-183 (192)
449 1rvk_A Isomerase/lactonizing e 78.0 32 0.0011 33.4 13.5 96 115-232 210-309 (382)
450 2y88_A Phosphoribosyl isomeras 78.0 3.6 0.00012 37.3 6.3 71 249-324 32-103 (244)
451 3bw2_A 2-nitropropane dioxygen 78.0 28 0.00096 33.8 13.1 112 176-325 113-238 (369)
452 2plj_A Lysine/ornithine decarb 77.9 44 0.0015 33.0 14.7 82 202-291 185-282 (419)
453 3ta9_A Glycoside hydrolase fam 77.8 3.4 0.00011 42.2 6.5 85 175-261 69-162 (458)
454 3elf_A Fructose-bisphosphate a 77.7 10 0.00034 37.3 9.6 122 213-354 7-155 (349)
455 1eep_A Inosine 5'-monophosphat 77.7 53 0.0018 32.2 15.2 127 121-268 154-285 (404)
456 3qom_A 6-phospho-beta-glucosid 77.7 4.1 0.00014 41.8 7.1 92 175-267 77-181 (481)
457 1pbg_A PGAL, 6-phospho-beta-D- 77.7 4.5 0.00015 41.3 7.4 83 175-259 57-147 (468)
458 4hz8_A Beta-glucosidase; BGLB, 77.5 4.4 0.00015 41.1 7.2 83 175-259 61-151 (444)
459 2yxb_A Coenzyme B12-dependent 77.4 34 0.0011 29.3 13.8 95 121-270 35-130 (161)
460 2og9_A Mandelate racemase/muco 77.3 13 0.00046 36.4 10.7 94 115-230 217-313 (393)
461 1h5y_A HISF; histidine biosynt 77.1 13 0.00044 33.3 9.7 72 249-324 34-106 (253)
462 2j78_A Beta-glucosidase A; fam 77.1 6.9 0.00024 39.9 8.6 83 175-259 84-174 (468)
463 1h7n_A 5-aminolaevulinic acid 77.1 11 0.00038 36.7 9.5 86 240-325 61-180 (342)
464 3chv_A Prokaryotic domain of u 77.0 7.7 0.00026 37.0 8.4 127 244-374 30-165 (284)
465 1n7k_A Deoxyribose-phosphate a 77.0 35 0.0012 31.4 12.7 136 178-348 42-184 (234)
466 3ewb_X 2-isopropylmalate synth 77.0 11 0.00038 35.8 9.6 54 245-301 24-77 (293)
467 3r0u_A Enzyme of enolase super 76.9 25 0.00084 34.5 12.4 94 115-230 196-294 (379)
468 2hjp_A Phosphonopyruvate hydro 76.9 31 0.0011 32.8 12.7 210 124-354 27-257 (290)
469 3e02_A Uncharacterized protein 76.9 17 0.00057 35.1 10.8 129 244-373 28-188 (311)
470 3s5o_A 4-hydroxy-2-oxoglutarat 76.7 23 0.00077 33.8 11.7 61 217-282 100-166 (307)
471 2ash_A Queuine tRNA-ribosyltra 76.7 62 0.0021 32.0 15.8 131 182-327 143-278 (381)
472 1wbh_A KHG/KDPG aldolase; lyas 76.7 9 0.00031 34.7 8.5 70 245-323 25-94 (214)
473 4dwd_A Mandelate racemase/muco 76.6 9.9 0.00034 37.6 9.4 94 115-230 201-296 (393)
474 1thf_D HISF protein; thermophI 76.6 13 0.00043 33.8 9.6 71 249-323 31-102 (253)
475 1me8_A Inosine-5'-monophosphat 76.5 7.9 0.00027 39.6 8.9 77 249-331 242-319 (503)
476 3lot_A Uncharacterized protein 76.4 21 0.00071 34.5 11.3 129 244-373 28-190 (314)
477 3s1x_A Probable transaldolase; 76.2 29 0.00099 31.9 11.8 152 174-359 9-163 (223)
478 1egz_A Endoglucanase Z, EGZ, C 76.2 23 0.00079 32.7 11.5 57 174-233 40-97 (291)
479 3o63_A Probable thiamine-phosp 76.1 48 0.0016 30.5 13.9 113 176-323 47-161 (243)
480 4af0_A Inosine-5'-monophosphat 76.1 32 0.0011 35.8 13.2 131 119-267 280-412 (556)
481 4dde_A 6-phospho-beta-glucosid 76.0 4.8 0.00016 41.3 7.1 93 175-268 73-178 (480)
482 2qgh_A Diaminopimelate decarbo 76.0 63 0.0022 31.8 16.9 54 122-189 71-128 (425)
483 3stp_A Galactonate dehydratase 75.9 14 0.00047 36.9 10.3 94 115-230 240-336 (412)
484 2e9l_A Cytosolic beta-glucosid 75.9 5.4 0.00018 40.8 7.4 61 175-235 60-120 (469)
485 3k30_A Histamine dehydrogenase 75.9 14 0.00049 39.0 11.0 136 179-322 163-322 (690)
486 2o9p_A Beta-glucosidase B; fam 75.7 4.6 0.00016 41.1 6.8 84 175-261 70-162 (454)
487 2qde_A Mandelate racemase/muco 75.6 23 0.00077 34.8 11.8 94 115-230 199-295 (397)
488 3no5_A Uncharacterized protein 75.5 13 0.00044 35.3 9.5 125 244-373 26-160 (275)
489 1vzw_A Phosphoribosyl isomeras 75.5 4 0.00014 37.1 5.8 69 249-323 33-103 (244)
490 1yad_A Regulatory protein TENI 75.5 29 0.00098 30.8 11.5 112 166-321 17-134 (221)
491 2q02_A Putative cytoplasmic pr 75.5 30 0.001 30.9 11.9 76 209-286 81-161 (272)
492 1vhc_A Putative KHG/KDPG aldol 75.3 11 0.00037 34.5 8.7 70 245-323 26-95 (224)
493 1qox_A Beta-glucosidase; hydro 75.1 5.9 0.0002 40.2 7.4 83 175-259 61-151 (449)
494 2pcq_A Putative dihydrodipicol 75.1 51 0.0017 30.9 13.6 170 108-351 39-209 (283)
495 3l6u_A ABC-type sugar transpor 75.0 46 0.0016 29.8 13.1 194 116-330 22-229 (293)
496 3dg3_A Muconate cycloisomerase 74.9 10 0.00035 37.0 8.9 93 115-230 195-290 (367)
497 3dgb_A Muconate cycloisomerase 74.9 24 0.00084 34.5 11.8 94 115-230 204-300 (382)
498 1a3w_A Pyruvate kinase; allost 74.9 76 0.0026 32.6 15.7 194 115-328 190-406 (500)
499 3ro6_B Putative chloromuconate 74.9 11 0.00037 36.6 9.1 114 107-254 190-309 (356)
500 3l5a_A NADH/flavin oxidoreduct 74.9 29 0.001 34.7 12.4 119 210-328 101-289 (419)
No 1
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=100.00 E-value=4e-74 Score=565.74 Aligned_cols=299 Identities=44% Similarity=0.742 Sum_probs=289.9
Q ss_pred CCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeC
Q 015894 94 VPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTP 173 (398)
Q Consensus 94 ~p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~ 173 (398)
||++|+|+|||||||+|+++..|++++|++|++.|+++||+.||+|+|++|+++|++.|.+++++.+++.+++++++|++
T Consensus 3 ~~~~v~i~DtTlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~~ 82 (307)
T 1ydo_A 3 YPKKVTIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYAALVP 82 (307)
T ss_dssp CCSBCEEEECHHHHTGGGSSSCCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEEEECC
T ss_pred CCCceEEEECCCCCCcCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhcCCCeEEEEeC
Confidence 78899999999999999999999999999999999999999999999999999999999998888887668999999999
Q ss_pred CHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHH
Q 015894 174 NLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYV 253 (398)
Q Consensus 174 n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~ 253 (398)
|.+|+++++++|++.|++|.++||.|.+.|+|+|++++++.+.+++++||++|++|+++++++|+||+.++++++++.++
T Consensus 83 ~~~~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~ 162 (307)
T 1ydo_A 83 NQRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRL 162 (307)
T ss_dssp SHHHHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHH
T ss_pred CHHhHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCC
Q 015894 254 SKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPY 333 (398)
Q Consensus 254 a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~ 333 (398)
++++.++|+++|+|+||+|.++|.+++++++.+++++|+++|++|+|||+|||+||+++|+++||++||+|++|||||||
T Consensus 163 ~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd~tv~GlGecp~ 242 (307)
T 1ydo_A 163 SEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGCPY 242 (307)
T ss_dssp HHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCEEEEBGGGCCEETT
T ss_pred HHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEEcccccCCCCC
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred CCCCCCCccHHHHHHHHHhCCCCCccChHHHHHHHHHHHHHhCCCCCCCcccccccccc
Q 015894 334 AKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSKTST 392 (398)
Q Consensus 334 a~graGNa~lE~vv~~L~~~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~pivG~~~f~ 392 (398)
||||+||++||+|+++|+.+|+++++|+++|.++++++++.+|+++|++.|.+|.....
T Consensus 243 a~graGN~~~E~lv~~L~~~g~~t~idl~~L~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 301 (307)
T 1ydo_A 243 APGSSGNAATEDIVYMLEQMDIKTNVKLEKLLSAAKWIEEKMGKPLPSRNLQVFKSSLE 301 (307)
T ss_dssp EEEEECBCBHHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHHHTSCCCCHHHHHHTC---
T ss_pred CCCCCCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCchhhHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999988766
No 2
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=100.00 E-value=1.3e-71 Score=545.30 Aligned_cols=297 Identities=64% Similarity=1.045 Sum_probs=289.0
Q ss_pred CCCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe
Q 015894 93 RVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT 172 (398)
Q Consensus 93 ~~p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~ 172 (398)
+||++|+|+|||||||+|+++..|++++|++|++.|+++||+.||+|+|++|+++|++.|.+++++.+++.+++++.+++
T Consensus 1 ~~~~~v~i~D~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~ 80 (298)
T 2cw6_A 1 TLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLT 80 (298)
T ss_dssp CCCSBCEEEECTTTHHHHTCSSCCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEEC
T ss_pred CCCCceEEEECCCCcccCCCCCCCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCCCEEEEEc
Confidence 47889999999999999999999999999999999999999999999999999999999999888888877889999999
Q ss_pred CCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHH
Q 015894 173 PNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAY 252 (398)
Q Consensus 173 ~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~ 252 (398)
+|.+++++++++|++.|+++.++||.|.+.|++++++++++.+.+++++||++|+.|+++++++|+||+.++++++++.+
T Consensus 81 ~~~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~ 160 (298)
T 2cw6_A 81 PNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAE 160 (298)
T ss_dssp CSHHHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHH
T ss_pred CCHHhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCC
Q 015894 253 VSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCP 332 (398)
Q Consensus 253 ~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp 332 (398)
+++++.++|+++|+|+||+|.++|.+++++++.+++++|+++|++|+|||+|||+||+++|+++||++||+|++|+||||
T Consensus 161 ~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~tv~GlG~cp 240 (298)
T 2cw6_A 161 VTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCP 240 (298)
T ss_dssp HHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBTTSCCCCT
T ss_pred HHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEeecccccCCC
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccHHHHHHHHHhCCCCCccChHHHHHHHHHHHHHhCCCCCCCccccccc
Q 015894 333 YAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSK 389 (398)
Q Consensus 333 ~a~graGNa~lE~vv~~L~~~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~pivG~~ 389 (398)
|||||+||++||+++++|+.+|+++++|+++|.++++++++.+|+++|+++|.+|.+
T Consensus 241 ~a~g~aGN~~~E~lv~~l~~~g~~~~idl~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (298)
T 2cw6_A 241 YAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQATCK 297 (298)
T ss_dssp TSCSSCCBCBHHHHHHHHHHHTCBCCCCHHHHHHHHHHHHHHTTCCCCCHHHHHHC-
T ss_pred CCCCCcCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCchhhhhhhcc
Confidence 999999999999999999999999999999999999999999999999999999864
No 3
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.7e-70 Score=538.52 Aligned_cols=295 Identities=57% Similarity=0.956 Sum_probs=286.7
Q ss_pred CCCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe
Q 015894 93 RVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT 172 (398)
Q Consensus 93 ~~p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~ 172 (398)
+||++|+|+|||||||+|++++.|++++|++|++.|+++|+++||+|+|++|+++|++.|.+++++.+.+.+++++++|+
T Consensus 4 ~~~~~v~i~D~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~ 83 (302)
T 2ftp_A 4 NLPKKVRLVEVGPRDGLQNEKQPIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA 83 (302)
T ss_dssp CCCSBCEEEECTTTHHHHTSSSCCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC
T ss_pred CCCCCcEEEeCCCCCCccCCCCCCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEEe
Confidence 37889999999999999999999999999999999999999999999999999999999998887777766789999999
Q ss_pred CCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHH
Q 015894 173 PNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAY 252 (398)
Q Consensus 173 ~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~ 252 (398)
+|.+++++++++|++.|++|+++||.|.+.|+|++++++++.+++++++||++|+.|+++|+++|+||+.++++++++.+
T Consensus 84 ~~~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~ 163 (302)
T 2ftp_A 84 PNLKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAW 163 (302)
T ss_dssp CSHHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHH
T ss_pred CCHHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCC
Q 015894 253 VSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCP 332 (398)
Q Consensus 253 ~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp 332 (398)
+++.+.++|+++|+|+||.|.++|.+++++++.+++++|+++|++|+|||+|||+||+++|+++||++||+|++||||||
T Consensus 164 ~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~tv~GlG~cp 243 (302)
T 2ftp_A 164 VARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAGLGGCP 243 (302)
T ss_dssp HHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCBCG
T ss_pred HHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEecccccCCCC
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccHHHHHHHHHhCCCCCccChHHHHHHHHHHHHHhCCCCCCCccccc
Q 015894 333 YAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIAL 387 (398)
Q Consensus 333 ~a~graGNa~lE~vv~~L~~~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~pivG 387 (398)
|||||+||++||+|+++|+.+|+++++|+++|.++++++++.+|+++|+++|.++
T Consensus 244 ~a~gr~GN~~~E~lv~~l~~~g~~~~idl~~l~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
T 2ftp_A 244 YAKGATGNVASEDVLYLLNGLEIHTGVDMHALVDAGQRICAVLGKSNGSRAAKAL 298 (302)
T ss_dssp GGTTCBCBCBHHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHHHCCCCSCHHHHHH
T ss_pred CCCCCCCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHhCCCCCccchhhc
Confidence 9999999999999999999999999999999999999999999999999999874
No 4
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=100.00 E-value=8.6e-68 Score=532.45 Aligned_cols=287 Identities=21% Similarity=0.290 Sum_probs=266.1
Q ss_pred CCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeC
Q 015894 94 VPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTP 173 (398)
Q Consensus 94 ~p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~ 173 (398)
+|++|+|+|||||||+|+++..|++++|++|++.|+++||++||+|||++. | .|.+.+.+..+..+++++++|+|
T Consensus 9 ~~~~v~I~DtTLRDG~Q~~~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~---~--~d~e~v~~i~~~~~~~~i~~l~r 83 (370)
T 3rmj_A 9 QTNRVIIFDTTLRDGEQSPGAAMTKEEKIRVARQLEKLGVDIIEAGFAAAS---P--GDFEAVNAIAKTITKSTVCSLSR 83 (370)
T ss_dssp -CCBCEEEECCCCCCTTSTTCCCCHHHHHHHHHHHHHHTCSEEEEEEGGGC---H--HHHHHHHHHHTTCSSSEEEEEEE
T ss_pred CCCCEEEEECCCCccccCCCCCcCHHHHHHHHHHHHHcCCCEEEEeCCCCC---H--HHHHHHHHHHHhCCCCeEEEEec
Confidence 588999999999999999999999999999999999999999999998753 2 35666666556678999999997
Q ss_pred -CHhhHHHHHH----cCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHH
Q 015894 174 -NLKGFEAAVA----AGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPS 248 (398)
Q Consensus 174 -n~~~ie~a~~----~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~ 248 (398)
+.+|++++++ +|++.|++|+++||.|.+.|+|+|++++++.+.+++++||++|..|. |+||++++++++
T Consensus 84 ~~~~di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~------~~~ed~~r~~~~ 157 (370)
T 3rmj_A 84 AIERDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVE------FSCEDALRSEID 157 (370)
T ss_dssp SSHHHHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEE------EEEETGGGSCHH
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEE------EecCCCCccCHH
Confidence 7899999988 89999999999999999999999999999999999999999999876 678899999999
Q ss_pred HHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCC---CeEEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 249 KVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPV---DKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 249 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~---~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
++.++++++.++|+++|+||||+|+++|.+++++|+.+++++|+ ++|++|+|||+|||+||+++|+++||++||+|+
T Consensus 158 ~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv 237 (370)
T 3rmj_A 158 FLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVECTV 237 (370)
T ss_dssp HHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBG
T ss_pred HHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEEEec
Confidence 99999999999999999999999999999999999999999986 799999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCccHHHHHHHHHh----CCCCCccChHHHHHHHHHHHHHhCCCCCCCcccccccccccccCCC
Q 015894 326 SGLGGCPYAKGASGNVATEDVVYMLNG----LGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSKTSTANASKL 398 (398)
Q Consensus 326 ~GlGecp~a~graGNa~lE~vv~~L~~----~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~pivG~~~f~~~~s~~ 398 (398)
+|||| |+||++||+|+++|+. +|+++++|+++|.++++++++++|+++|+++|+||+++|+ |+|||
T Consensus 238 ~GlGe------raGN~~lE~vv~~L~~~~~~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~p~vG~~aF~-h~sGi 307 (370)
T 3rmj_A 238 NGLGE------RAGNASVEEIVMALKVRHDLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFS-HESGI 307 (370)
T ss_dssp GGCSS------TTCBCBHHHHHHHHHHTHHHHCCBCCCCGGGHHHHHHHHHHHHTCCCCSSCTTTSTTTTC------
T ss_pred cccCc------ccccccHHHHHHHHHhhhhccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCccchhHHH-hcccc
Confidence 99999 9999999999999974 5999999999999999999999999999999999999999 99997
No 5
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=4.7e-68 Score=526.33 Aligned_cols=288 Identities=23% Similarity=0.271 Sum_probs=238.6
Q ss_pred CCCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe
Q 015894 93 RVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT 172 (398)
Q Consensus 93 ~~p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~ 172 (398)
+||++|+|+|||||||+|+++..|++++|++|++.|+++||+.||+|||... | .|.+.+.+..+..+++++++|+
T Consensus 2 ~~~~~v~I~DttlRDG~Q~~~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~---~--~d~e~v~~i~~~~~~~~i~~l~ 76 (325)
T 3eeg_A 2 SLGKRIFVFDTTLRDGEQVPGCQLNTEEKIIVAKALDELGVDVIEAGFPVSS---P--GDFNSVVEITKAVTRPTICALT 76 (325)
T ss_dssp --CEECEEEECGGGCC-------CCTTHHHHHHHHHHHHTCSEEEEECTTSC---H--HHHHHHHHHHHHCCSSEEEEEC
T ss_pred CCCCceEEEECCCCCcccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC---H--hHHHHHHHHHHhCCCCEEEEee
Confidence 4788999999999999999999999999999999999999999999998632 2 2444444444567899999999
Q ss_pred C-CHhhHHHHHHc----CCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCH
Q 015894 173 P-NLKGFEAAVAA----GAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPP 247 (398)
Q Consensus 173 ~-n~~~ie~a~~~----Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~ 247 (398)
| +.+|+++++++ |+++|++|+++||.|.+.|+|+|++++++.+.+++++||++|+.|. |+||+.+++++
T Consensus 77 r~~~~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~------f~~~d~~~~~~ 150 (325)
T 3eeg_A 77 RAKEADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVE------FFCEDAGRADQ 150 (325)
T ss_dssp CSCHHHHHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEE------EEEETGGGSCH
T ss_pred cCCHHHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEE------EEccccccchH
Confidence 7 67899999988 9999999999999999999999999999999999999999999875 67899999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCC---CeEEEEeCCccchHHHHHHHHHHhCCCEEeec
Q 015894 248 SKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPV---DKLAVHFHDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 248 ~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~---~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
+++.++++++.++|+++|+|+||+|+++|.+++++++.+++++|+ ++|++|+|||+|||+||+++|+++||++||+|
T Consensus 151 ~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd~t 230 (325)
T 3eeg_A 151 AFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECT 230 (325)
T ss_dssp HHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEEEB
T ss_pred HHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEEEe
Confidence 999999999999999999999999999999999999999999986 79999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCccHHHHHHHHHh----CCCCCccChHHHHHHHHHHHHHhCCCCCCCcccccccccccccCCC
Q 015894 325 VSGLGGCPYAKGASGNVATEDVVYMLNG----LGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSKTSTANASKL 398 (398)
Q Consensus 325 v~GlGecp~a~graGNa~lE~vv~~L~~----~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~pivG~~~f~~~~s~~ 398 (398)
++|||| |+||++||+|+++|+. +|+++++|+++|.++++++++++|+++|+++|+||+++|+ |+|||
T Consensus 231 v~GlGe------r~GN~~lE~vv~~L~~~~~~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~p~vG~~af~-h~sGi 301 (325)
T 3eeg_A 231 INGIGE------RAGNTALEEVVMAMECHKETLGLETGINHKKLVPISHLVSTLMRMQVQSNKAIVGRNAFA-HSSGI 301 (325)
T ss_dssp GGGCCS------TTCCCBHHHHHHHHHHTHHHHCEECCCCGGGHHHHHHHHHHHTTC---------------------
T ss_pred cccccc------cccchhHHHHHHHHHhhhhccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCccchhHHH-Hhccc
Confidence 999999 9999999999999984 6999999999999999999999999999999999999999 99996
No 6
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=100.00 E-value=2.1e-66 Score=507.19 Aligned_cols=290 Identities=53% Similarity=0.841 Sum_probs=276.3
Q ss_pred CCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeC
Q 015894 94 VPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTP 173 (398)
Q Consensus 94 ~p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~ 173 (398)
||++|+|+|||||||+|+++..|++++|++|++.|+++|++.||+|+|++++|+|+|+|.+++++.+++.++++++++++
T Consensus 1 ~~~~v~i~d~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~~ 80 (295)
T 1ydn_A 1 MAEHVEIVEMAARDGLQNEKRFVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLVP 80 (295)
T ss_dssp -CCBCEEEECTTTHHHHTSSSCCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEECS
T ss_pred CCCceEEEECCCCccccCCCCCcCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEeC
Confidence 57899999999999999999999999999999999999999999999999999999999998888887667899999999
Q ss_pred CHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHH
Q 015894 174 NLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYV 253 (398)
Q Consensus 174 n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~ 253 (398)
|.+++++++++|++.|++++++||.|.+.|++++.+++++++++++++||+.|+.|+++|+++||||+.++++++++.++
T Consensus 81 n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~ 160 (295)
T 1ydn_A 81 NMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASV 160 (295)
T ss_dssp SHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCC
Q 015894 254 SKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPY 333 (398)
Q Consensus 254 a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~ 333 (398)
++.+.++|+++|+|+||.|.++|.++.++++.+++.+|.++|++|+|||+|+|+||+++|+++||+.||+|++|||||||
T Consensus 161 ~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~sv~GlG~cp~ 240 (295)
T 1ydn_A 161 TEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASVGGLGGCPF 240 (295)
T ss_dssp HHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEEBTTCCSCBTT
T ss_pred HHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEEeccccCCCCCC
Confidence 99999999999999999999999999999999999998778999999999999999999999999999999999999999
Q ss_pred CCCCCCCccHHHHHHHHHhCCCCCccChHHHHHHHHHHHHHhCCCCCCCc
Q 015894 334 AKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKT 383 (398)
Q Consensus 334 a~graGNa~lE~vv~~L~~~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~ 383 (398)
||||+||++||+++.+|+.+|+++++|+++|.+++++++++.+...+..+
T Consensus 241 a~g~~GN~~~e~lv~~l~~~g~~~~id~~~l~~~~~~~~~~~~~~~~~~~ 290 (295)
T 1ydn_A 241 APGAKGNVDTVAVVEMLHEMGFETGLDLDRLRSAGLFTQALRQDKAALEH 290 (295)
T ss_dssp BTTSCCBCBHHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHHHCC------
T ss_pred CCCCcCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCCccc
Confidence 99999999999999999999999999999999999999999999887543
No 7
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=100.00 E-value=5.9e-66 Score=513.66 Aligned_cols=289 Identities=20% Similarity=0.233 Sum_probs=264.3
Q ss_pred CCCccEEEeCCCcccCCCCCCCCCHHHHHHHHH-HHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHH-------hccC
Q 015894 94 VPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIK-LLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ-------NVEG 165 (398)
Q Consensus 94 ~p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~-~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~-------~~~~ 165 (398)
+|++|+|+|||||||+|++++.|++++|++|++ .|+++||+.||+|+|++.+ +.++.++.++ .+++
T Consensus 16 ~~~~v~I~DtTlRDG~Q~~~~~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~------~~~~~v~~~~~~~~~~~~~~~ 89 (337)
T 3ble_A 16 VETRLEILDVTLRDGEQTRGVSFSTSEKLNIAKFLLQKLNVDRVEIASARVSK------GELETVQKIMEWAATEQLTER 89 (337)
T ss_dssp ---CCEEEECHHHHHTTSTTCCCCHHHHHHHHHHHHHTTCCSEEEEEETTSCT------THHHHHHHHHHHHHHTTCGGG
T ss_pred CCCceEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCCCCh------hHHHHHHHHHhhhhhhccCCC
Confidence 788999999999999999999999999999999 9999999999999998521 2223333333 3578
Q ss_pred CcEEEEeCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCC
Q 015894 166 ARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMV 245 (398)
Q Consensus 166 ~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~ 245 (398)
+++++|+++.+++++++++|++.|++|+++||.|.+.++|+|+++.++.+.+++++||++|++|++++++ |++.+++
T Consensus 90 ~~i~~l~~~~~~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~~~~~ 166 (337)
T 3ble_A 90 IEILGFVDGNKTVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED---WSNGFRN 166 (337)
T ss_dssp EEEEEESSTTHHHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET---HHHHHHH
T ss_pred CeEEEEccchhhHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCCCCcC
Confidence 8999999998899999999999999999999999999999999999999999999999999999977764 4457889
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
+++++.++++++.++|+++|+|+||+|+++|.+++++++.+++++|+++|++|+|||+|||+||+++|+++||++||+|+
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv 246 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASI 246 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEEec
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCccHHHHHHHHHhC-CCCCccChHHHHHHHHHHHHHhCCCCCCCcccccccccccccCCC
Q 015894 326 SGLGGCPYAKGASGNVATEDVVYMLNGL-GVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSKTSTANASKL 398 (398)
Q Consensus 326 ~GlGecp~a~graGNa~lE~vv~~L~~~-Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~pivG~~~f~~~~s~~ 398 (398)
+|||| |+||++||+|+++|+.. |+++++|+++|.++++++++++|+++|+++|++|+++|+ |+|||
T Consensus 247 ~GlG~------~aGN~~~E~lv~~L~~~~g~~tgidl~~L~~~~~~v~~~~~~~~~~~~~~vg~~~f~-h~~Gi 313 (337)
T 3ble_A 247 NGLGE------RAGNTPLEALVTTIHDKSNSKTNINEIAITEASRLVEVFSGKRISANRPIVGEDVFT-QTAGV 313 (337)
T ss_dssp GGCSS------TTCBCBHHHHHHHHHHHSSCCCCCCGGGHHHHHHHHHHHHCCCCCTTCTTTSTTTTC-C----
T ss_pred ccccc------cccchhHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCCCCccchhhhhhh-eeccc
Confidence 99999 99999999999999986 999999999999999999999999999999999999999 99986
No 8
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=100.00 E-value=2.1e-63 Score=506.61 Aligned_cols=286 Identities=18% Similarity=0.201 Sum_probs=246.6
Q ss_pred CCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeC
Q 015894 94 VPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTP 173 (398)
Q Consensus 94 ~p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~ 173 (398)
|+++|+|+|||||||+|.++..|++++|++|++.|+++||+.||+|+|.+ .|+ |.+.+....+...+.++.++++
T Consensus 36 ~~~~V~I~DtTLRDG~Q~~~~~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~a---sp~--d~~~~~~i~~~~~~~~v~~~~r 110 (423)
T 3ivs_A 36 RVNNFSIIESTLREGEQFANAFFDTEKKIQIAKALDNFGVDYIELTSPVA---SEQ--SRQDCEAICKLGLKCKILTHIR 110 (423)
T ss_dssp CTTSCEEEECTTTGGGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECCTTS---CHH--HHHHHHHHHTSCCSSEEEEEEE
T ss_pred CCCcEEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEEeeccc---CHH--HHHHHHHHHhcCCCCEEEEeec
Confidence 56789999999999999999999999999999999999999999998653 344 2333333333333566666664
Q ss_pred -CHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHH
Q 015894 174 -NLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAY 252 (398)
Q Consensus 174 -n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~ 252 (398)
+.+|+++++++|++.|++|+++||.|.+.++++|+++.++.+.+++++||++|+.|+++.+ +.++++++++.+
T Consensus 111 ~~~~di~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e------da~r~d~~~~~~ 184 (423)
T 3ivs_A 111 CHMDDARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE------DSFRSDLVDLLS 184 (423)
T ss_dssp SCHHHHHHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEE------SGGGSCHHHHHH
T ss_pred cChhhHHHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc------cCcCCCHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999985544 567899999999
Q ss_pred HHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCC
Q 015894 253 VSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCP 332 (398)
Q Consensus 253 ~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp 332 (398)
+++++.++|+++|+|+||+|+++|.+++++++.++++.+ ++|++|+|||+|||+||+++|+++||++||+|++|+||
T Consensus 185 v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~-~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~ti~GlGE-- 261 (423)
T 3ivs_A 185 LYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVS-CDIECHFHNDTGMAIANAYCALEAGATHIDTSILGIGE-- 261 (423)
T ss_dssp HHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCS-SEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS--
T ss_pred HHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcC-CeEEEEECCCCchHHHHHHHHHHhCCCEEEEecccccC--
Confidence 999999999999999999999999999999999999875 68999999999999999999999999999999999999
Q ss_pred CCCCCCCCccHHHHHHHHHh---CCCCCccChHHHHHHHHHHHHHhCCCCCCCcccccccccccccCCC
Q 015894 333 YAKGASGNVATEDVVYMLNG---LGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSKTSTANASKL 398 (398)
Q Consensus 333 ~a~graGNa~lE~vv~~L~~---~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~pivG~~~f~~~~s~~ 398 (398)
|+||++||+|+++|.. +++++++|+++|.++++++++++|+++|+|+|+||+++|+ |+|||
T Consensus 262 ----RaGNa~Le~vv~~L~~~~~~~~~~~idl~~L~~is~~v~~~~~~~v~~~kpivG~~aFa-h~sGi 325 (423)
T 3ivs_A 262 ----RNGITPLGALLARMYVTDREYITHKYKLNQLRELENLVADAVEVQIPFNNYITGMCAFT-HKAGI 325 (423)
T ss_dssp ----TTCBCBHHHHHHHHHHHCHHHHHHHSCGGGHHHHHHHHHHHTTCCCCTTCTTTSTTTTE-EECSG
T ss_pred ----cccchhHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCchhHhHHH-hhcch
Confidence 9999999999998864 3678999999999999999999999999999999999999 99996
No 9
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=100.00 E-value=9.3e-62 Score=490.84 Aligned_cols=281 Identities=21% Similarity=0.236 Sum_probs=248.4
Q ss_pred ccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHH-hccCCcEEEEeC-C
Q 015894 97 FVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ-NVEGARFPVLTP-N 174 (398)
Q Consensus 97 ~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~-~~~~~~l~~l~~-n 174 (398)
+|+|+|||||||+|++++.|++++|++|++.|+++||+.||+|+|.. .|++ .+ ..+.++ ..+++++.++.| +
T Consensus 3 ~v~I~DtTLRDG~Q~~~~~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~---~~~~--~~-~~~~i~~~~~~~~v~~~~r~~ 76 (382)
T 2ztj_A 3 EWKIIDSTLREGEQFEKANFSTQDKVEIAKALDEFGIEYIEVTTPVA---SPQS--RK-DAEVLASLGLKAKVVTHIQCR 76 (382)
T ss_dssp CCEEEEEEETGGGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECCTTS---CHHH--HH-HHHHHHTSCCSSEEEEEEESC
T ss_pred ceEEEECCCCcccCCCCCCcCHHHHHHHHHHHHHcCcCEEEEcCCcC---CHHH--HH-HHHHHHhcCCCcEEEEEcccC
Confidence 59999999999999999999999999999999999999999998653 3433 22 233344 345678888887 5
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCC--CcEEEEEeeeecCCCCCCCCHHHHHH
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELS--IPVRGYLSCVVGCPVEGMVPPSKVAY 252 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G--~~v~~~l~~~fg~~~~~r~~~~~l~~ 252 (398)
.+++++++++|++.|++|+++||.|.+ ++++|++++++.+.+++++||++| +.|++++ ++.++++++++.+
T Consensus 77 ~~di~~a~~~g~~~v~i~~~~s~~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~------ed~~~~~~~~~~~ 149 (382)
T 2ztj_A 77 LDAAKVAVETGVQGIDLLFGTSKYLRA-PHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSA------EDTFRSEEQDLLA 149 (382)
T ss_dssp HHHHHHHHHTTCSEEEEEECC---------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEE------TTTTTSCHHHHHH
T ss_pred hhhHHHHHHcCCCEEEEEeccCHHHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEE------EeCCCCCHHHHHH
Confidence 789999999999999999999999999 999999999999999999999999 7776433 4677999999999
Q ss_pred HHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhC-CCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCC
Q 015894 253 VSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAV-PVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGC 331 (398)
Q Consensus 253 ~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~-p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGec 331 (398)
+++++.++ +++|+|+||+|+++|.+++++|+.+++.+ |+++|++|+|||+|||+||+++|+++||++||+|++||||
T Consensus 150 ~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlGe- 227 (382)
T 2ztj_A 150 VYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTILGIGE- 227 (382)
T ss_dssp HHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS-
T ss_pred HHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEEccccccc-
Confidence 99999999 99999999999999999999999999976 6789999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccHHHHHHHHHh---CCCCCccChHHHHHHHHHHHHHhCCCCCCCcccccccccccccCCC
Q 015894 332 PYAKGASGNVATEDVVYMLNG---LGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSKTSTANASKL 398 (398)
Q Consensus 332 p~a~graGNa~lE~vv~~L~~---~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~pivG~~~f~~~~s~~ 398 (398)
|+||++||+++++|+. +|+++++|+++|.++++++++++|+++|+++|++|.++|+ |+|||
T Consensus 228 -----raGN~~lE~vv~~L~~~~~~g~~t~idl~~L~~~s~~v~~~~~~~~~~~~p~vG~~~f~-h~sGi 291 (382)
T 2ztj_A 228 -----RNGITPLGGFLARMYTLQPEYVRRKYKLEMLPELDRMVARMVGVEIPFNNYITGETAFS-HKAGM 291 (382)
T ss_dssp -----TTCBCBHHHHHHHHHHHCHHHHHHHSCGGGHHHHHHHHHHHHTCCCCTTCTTTSTTTTE-ECCHH
T ss_pred -----cccchhHHHHHHHHHhhcCCcccCCCCHHHHHHHHHHHHHHhCCCCCcCCCcCCcchhh-eeccc
Confidence 9999999999999975 3588999999999999999999999999999999999999 99985
No 10
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=100.00 E-value=9e-61 Score=467.94 Aligned_cols=272 Identities=21% Similarity=0.244 Sum_probs=237.5
Q ss_pred CccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeCC-
Q 015894 96 GFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPN- 174 (398)
Q Consensus 96 ~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~n- 174 (398)
++|+|+|||||||+|+++..|++++|++|++.|+++||+.||+|+|.+. | .|.+.+.+..+..+++++++|+|+
T Consensus 4 ~~v~I~DttlRDG~Q~~~~~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~---~--~d~e~v~~i~~~~~~~~i~~l~~~~ 78 (293)
T 3ewb_X 4 KKIQFFDTTLRDGEQTPGVNFDVKEKIQIALQLEKLGIDVIEAGFPISS---P--GDFECVKAIAKAIKHCSVTGLARCV 78 (293)
T ss_dssp EEEEEEECTTTCCC-----CCCHHHHHHHHHHHHHHTCSEEEEECGGGC---H--HHHHHHHHHHHHCCSSEEEEEEESS
T ss_pred CeeEEEECCCCCcCcCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC---c--cHHHHHHHHHHhcCCCEEEEEecCC
Confidence 3699999999999999999999999999999999999999999997642 2 355555555556789999999986
Q ss_pred HhhHHHHHH----cCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHH
Q 015894 175 LKGFEAAVA----AGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKV 250 (398)
Q Consensus 175 ~~~ie~a~~----~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l 250 (398)
.+|++++++ +|++.|++|+++||.|.+.|+|+|++++++.+.+++++||++|..|++ ++++.++++++++
T Consensus 79 ~~di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~------~~~d~~~~~~~~~ 152 (293)
T 3ewb_X 79 EGDIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQF------SPEDATRSDRAFL 152 (293)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEE------EEETGGGSCHHHH
T ss_pred HHHHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEE------EeccCCCCCHHHH
Confidence 578998887 599999999999999999999999999999999999999999999873 3457789999999
Q ss_pred HHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCC---CeEEEEeCCccchHHHHHHHHHHhCCCEEeecccc
Q 015894 251 AYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPV---DKLAVHFHDTYGQALSNILASLQMGISTVDSSVSG 327 (398)
Q Consensus 251 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~---~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~G 327 (398)
.++++++.++|+++|+|+||+|.++|.+++++++.+++++|+ ++|++|+|||+|||+||+++|+++||++||+|++|
T Consensus 153 ~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~G 232 (293)
T 3ewb_X 153 IEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTING 232 (293)
T ss_dssp HHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGG
T ss_pred HHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEEeeccc
Confidence 999999999999999999999999999999999999999985 67999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCccHHHHHHHHHh----CCCCCccChHHHHHHHHHHHHHhCCCCCCCcc
Q 015894 328 LGGCPYAKGASGNVATEDVVYMLNG----LGVRTNVDIRKLMIAGDFICKHLGRTSGSKTA 384 (398)
Q Consensus 328 lGecp~a~graGNa~lE~vv~~L~~----~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~p 384 (398)
||| |+||++||+|+++|+. +|++|++|+++|.++++++++++|+++|+|.-
T Consensus 233 lGe------raGN~~~E~vv~~L~~~~~~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~~ 287 (293)
T 3ewb_X 233 IGE------RAGNTALEEVAVALHIRKDFYQAETNIVLNQFKNSSDLISRLSGMPVPRNEG 287 (293)
T ss_dssp CCT------TTCBCBHHHHHHHHHHTHHHHCEEECCCGGGHHHHHHHHHHC----------
T ss_pred ccc------ccccHhHHHHHHHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999 9999999999999985 69999999999999999999999999999864
No 11
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=100.00 E-value=1.1e-59 Score=497.21 Aligned_cols=293 Identities=16% Similarity=0.077 Sum_probs=262.6
Q ss_pred CCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc---cCCcEEE
Q 015894 94 VPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV---EGARFPV 170 (398)
Q Consensus 94 ~p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~---~~~~l~~ 170 (398)
+.+.++|+|+|||||+|+++..|++++|++|++.|+++||++||+|||.+. | .|.+.+.+..+.. +++++++
T Consensus 68 ~~~~p~i~DtTLRDGeQ~~g~~~s~eeKl~Ia~~L~~lGVd~IEaGfP~as---p--~D~e~v~~i~~~~l~~~~~~i~a 142 (644)
T 3hq1_A 68 IDRAPLWCAVDLRDGNQALIDPMSPARKRRMFDLLVRMGYKEIEVGFPSAS---Q--TDFDFVREIIEQGAIPDDVTIQV 142 (644)
T ss_dssp CCSCCEEEECCCCCCGGGCSSCCCHHHHHHHHHHHHHHTCSEEEEECTTTC---H--HHHHHHHHHHHTTCSCTTCEEEE
T ss_pred cCCCCEEEECCCCccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC---h--hHHHHHHHHHhcCCCCCCeEEEE
Confidence 455788999999999999999999999999999999999999999997643 2 4666665555542 4899999
Q ss_pred EeCCHh-hHHHHHH----cCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc-EEEEEeeeecCCCCCC
Q 015894 171 LTPNLK-GFEAAVA----AGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIP-VRGYLSCVVGCPVEGM 244 (398)
Q Consensus 171 l~~n~~-~ie~a~~----~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~-v~~~l~~~fg~~~~~r 244 (398)
|+++.+ +++++++ +|.+.|++|.++||.|++.++|+|++++++.+.++++++++++.. +.+.+.+.|++++.+|
T Consensus 143 L~r~~~~did~a~eal~~a~~~~Vhif~stSd~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasr 222 (644)
T 3hq1_A 143 LTQCRPELIERTFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTG 222 (644)
T ss_dssp EEESCHHHHHHHHHHHTTCSEEEEEEEEECCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGG
T ss_pred EecCCHhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCC
Confidence 999865 5887764 677899999999999999999999999999999999888877532 1112344477788999
Q ss_pred CCHHHHHHHHHHHHhC---CCC---EEEEccCcCcCCHHHHHHHHHHHHhhCC---CCeEEEEeCCccchHHHHHHHHHH
Q 015894 245 VPPSKVAYVSKQLYDM---GCS---EISLGDTIGVGTPGTVIPMLEAVLDAVP---VDKLAVHFHDTYGQALSNILASLQ 315 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~---Gad---~I~L~DT~G~~~P~~v~~lv~~l~~~~p---~~~l~~H~Hnd~GlA~ANalaAl~ 315 (398)
++++|++++++.+.++ |++ +|+|+||+|+++|..++++|+.+++++| .++|++|+|||+|||+||+++|++
T Consensus 223 td~dfl~ev~~aa~eaG~~Gad~~~~I~LpDTvG~~tP~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAvANslaAv~ 302 (644)
T 3hq1_A 223 TELEYAKQVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFA 302 (644)
T ss_dssp SCHHHHHHHHHHHHHHHCCCSSSCEEEEEEESSCCSCHHHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCceeEEEecCCCcccCHHHHHHHHHHHHHhcccccCceEEEecCCCCCcHHHHHHHHHH
Confidence 9999999999999985 677 8999999999999999999999999997 478999999999999999999999
Q ss_pred hCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCccChHHHHHHHHHHHHHhCCCCCCCccccccccccccc
Q 015894 316 MGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSKTSTANA 395 (398)
Q Consensus 316 aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~pivG~~~f~~~~ 395 (398)
+||++||+|++|+|| |+||++||+|+++|+.+|+++++|+++|.++++++++++|+++|+|+|+||+++|+ |+
T Consensus 303 AGA~~Vdgti~G~GE------RaGNa~LE~lv~~L~~~Gi~tgidl~~L~~is~~ve~~~g~~v~~~kpiVG~~aFa-h~ 375 (644)
T 3hq1_A 303 AGADRIEGCLFGNGE------RTGNVCLVTLGLNLFSRGVDPQIDFSNIDEIRRTVEYCNQLPVHERHPYGGDLVYT-AF 375 (644)
T ss_dssp TTCCEEEEBGGGCSS------TTCBCBHHHHHHHHHTTTCCCSSCCTTHHHHHHHHHHHHSCCCCTTCTTTSTTTTE-EC
T ss_pred hCCCEEEecCCCCCc------cccCccHHHHHHHHHhcccCCccCHHHHHHHHHHHHHHhCCCCCCCccccccccee-ec
Confidence 999999999999999 99999999999999999999999999999999999999999999999999999999 99
Q ss_pred CCC
Q 015894 396 SKL 398 (398)
Q Consensus 396 s~~ 398 (398)
|||
T Consensus 376 SGi 378 (644)
T 3hq1_A 376 SGS 378 (644)
T ss_dssp CHH
T ss_pred ccc
Confidence 985
No 12
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=100.00 E-value=1.2e-53 Score=445.81 Aligned_cols=275 Identities=19% Similarity=0.246 Sum_probs=251.4
Q ss_pred CCccEEEeCCCcccCCCCC-CCCCHHHHHHHHHHHHhcCCCEEEEecCCC---C-CcccCCCCHHHHHHHHH-hccCCcE
Q 015894 95 PGFVKIVEVGPRDGLQNEK-NIVPAVVKVELIKLLVSSGLAVVEATSFVS---P-KWVPQLADAKDVMAAIQ-NVEGARF 168 (398)
Q Consensus 95 p~~I~i~D~TLRDG~Q~~~-~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~---~-~~~p~~~D~~~v~~~i~-~~~~~~l 168 (398)
+++|+|+|||||||+|+.+ ..|++++|++|++.|+++|+++||+|++.+ + +++ ..|.+++++.++ .++++++
T Consensus 22 ~~~V~I~DtTLRDG~Qs~~~~~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl--~~d~~e~lr~l~~~~~~~~l 99 (539)
T 1rqb_A 22 PREVGITELVLRDAHQSLMATRMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFL--NEDPWERLRTFRKLMPNSRL 99 (539)
T ss_dssp SEECEEEECTTTHHHHHHSTTCCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTS--CCCHHHHHHHHHHHCTTSCE
T ss_pred CCceEEEECCCCchhccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhcc--CCCHHHHHHHHHHhCCCCEE
Confidence 4579999999999999996 589999999999999999999999998543 1 222 357888888887 4689999
Q ss_pred EEEeC--CH------------hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEe
Q 015894 169 PVLTP--NL------------KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLS 234 (398)
Q Consensus 169 ~~l~~--n~------------~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~ 234 (398)
++|+| |. .+++++.++|++.|+||.++||. +++.+++++||++|..|+++++
T Consensus 100 ~~L~R~~N~~G~~~ypddv~~~~ve~a~~aGvd~vrIf~s~sd~--------------~ni~~~i~~ak~~G~~v~~~i~ 165 (539)
T 1rqb_A 100 QMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVFDAMNDP--------------RNMAHAMAAVKKAGKHAQGTIC 165 (539)
T ss_dssp EEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCT--------------HHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEeccccccCcccCcccccHHHHHHHHhCCCCEEEEEEehhHH--------------HHHHHHHHHHHHCCCeEEEEEE
Confidence 99995 32 34689999999999999999986 4577899999999999999998
Q ss_pred eeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCC-CCeEEEEeCCccchHHHHHHHH
Q 015894 235 CVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVP-VDKLAVHFHDTYGQALSNILAS 313 (398)
Q Consensus 235 ~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p-~~~l~~H~Hnd~GlA~ANalaA 313 (398)
++++ .++++++++++++++.++|+++|+|+||+|+++|.+++++|+.+++++| +++|++|+|||+|||+||+++|
T Consensus 166 ~~~~----~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laA 241 (539)
T 1rqb_A 166 YTIS----PVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKA 241 (539)
T ss_dssp CCCS----TTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHH
T ss_pred eeeC----CCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHH
Confidence 7654 5679999999999999999999999999999999999999999999998 7899999999999999999999
Q ss_pred HHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCccChHHHHHHHHHHHHHhCCCCCCCccc-ccccccc
Q 015894 314 LQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAI-ALSKTST 392 (398)
Q Consensus 314 l~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~pi-vG~~~f~ 392 (398)
+++||++||+|++|+|+ |+||++||+++.+|+.+|+++++|+++|.+++++++++.+...|.+.|+ +|.++|.
T Consensus 242 veAGa~~VD~ti~g~Ge------rtGN~~lE~lv~~L~~~g~~tgidl~~L~~is~~v~~~~~~~~~~~~~~~~~~~v~~ 315 (539)
T 1rqb_A 242 IEAGVDVVDTAISSMSL------GPGHNPTESVAEMLEGTGYTTNLDYDRLHKIRDHFKAIRPKYKKFESKTLVDTSIFK 315 (539)
T ss_dssp HHTTCSEEEEBCGGGCS------TTSBCBHHHHHHHTTTSSEECCCCHHHHHHHHHHHHHHGGGGGGGCCSCSCCCTHHH
T ss_pred HHhCCCEEEEeccccCC------CccChhHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHhCCCcCCCCCccCCCceEE
Confidence 99999999999999999 9999999999999999999999999999999999999999999999999 9999999
Q ss_pred cccC
Q 015894 393 ANAS 396 (398)
Q Consensus 393 ~~~s 396 (398)
|++
T Consensus 316 -he~ 318 (539)
T 1rqb_A 316 -SQI 318 (539)
T ss_dssp -HCC
T ss_pred -ecC
Confidence 874
No 13
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=100.00 E-value=1.6e-52 Score=418.09 Aligned_cols=257 Identities=21% Similarity=0.280 Sum_probs=235.8
Q ss_pred CCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEe----cCC-CCCcccCCCCHHHHHHHHH-hccCCcE
Q 015894 95 PGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEAT----SFV-SPKWVPQLADAKDVMAAIQ-NVEGARF 168 (398)
Q Consensus 95 p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG----~~~-~~~~~p~~~D~~~v~~~i~-~~~~~~l 168 (398)
+++|+|+|||||||+|++++.|++++|++|++.|+++|++.||+| +|. +|++.|++.+.+++++.++ ..+++++
T Consensus 6 ~~~v~i~DttlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i 85 (345)
T 1nvm_A 6 SKKLYISDVTLRDGSHAIRHQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQI 85 (345)
T ss_dssp CCBCEEEECTTTHHHHHTTTCCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEE
T ss_pred CCCcEEEECCCCcccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEE
Confidence 357999999999999999999999999999999999999999997 664 6888888899888887776 4689999
Q ss_pred EEE-eC---CHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC
Q 015894 169 PVL-TP---NLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGM 244 (398)
Q Consensus 169 ~~l-~~---n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r 244 (398)
++| .+ +.++++++.++|++.|+|++++|+. +.+.+++++||++|+.++++++ +..+
T Consensus 86 ~~l~~p~~~~~~~i~~a~~aGvd~v~I~~~~s~~--------------~~~~~~i~~ak~~G~~v~~~~~------~a~~ 145 (345)
T 1nvm_A 86 ATLLLPGIGSVHDLKNAYQAGARVVRVATHCTEA--------------DVSKQHIEYARNLGMDTVGFLM------MSHM 145 (345)
T ss_dssp EEEECBTTBCHHHHHHHHHHTCCEEEEEEETTCG--------------GGGHHHHHHHHHHTCEEEEEEE------STTS
T ss_pred EEEecCCcccHHHHHHHHhCCcCEEEEEEeccHH--------------HHHHHHHHHHHHCCCEEEEEEE------eCCC
Confidence 999 44 4789999999999999999998874 3457889999999999997776 3467
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCC-CCeEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVP-VDKLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p-~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
++++++.++++.+.++|+++|+|+||+|.++|.+++++|+.+++++| +++|++|+|||+|||+||+++|+++||++||+
T Consensus 146 ~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~ 225 (345)
T 1nvm_A 146 IPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDA 225 (345)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEEe
Confidence 89999999999999999999999999999999999999999999996 78999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCccChHHHHHHHHHHHHH-hCC
Q 015894 324 SVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKH-LGR 377 (398)
Q Consensus 324 Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~t~iDl~~L~~~~~~v~~~-~g~ 377 (398)
|++|||| |+||++||+++++|+.+|+++++|+++|.++++++++. .+.
T Consensus 226 tv~GlG~------~aGN~~le~lv~~L~~~g~~~~idl~~l~~~~~~~~~~~~~~ 274 (345)
T 1nvm_A 226 SLAGMGA------GAGNAPLEVFIAVAERLGWNHGTDLYTLMDAADDIVRPLQDR 274 (345)
T ss_dssp BGGGCSS------TTCBCBHHHHHHHHHHHTCBCCSCHHHHHHHHHHTTGGGCSS
T ss_pred cchhccC------CccCcCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 9999999 99999999999999999999999999999999999876 444
No 14
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=100.00 E-value=4.5e-52 Score=428.39 Aligned_cols=269 Identities=21% Similarity=0.256 Sum_probs=241.9
Q ss_pred CCccEEEeCCCcccCCCCC-CCCCHHHHHHHHHHHHhcCCCEEEEecCCC---C-CcccCCCCHHHHHHHHHh-ccCCcE
Q 015894 95 PGFVKIVEVGPRDGLQNEK-NIVPAVVKVELIKLLVSSGLAVVEATSFVS---P-KWVPQLADAKDVMAAIQN-VEGARF 168 (398)
Q Consensus 95 p~~I~i~D~TLRDG~Q~~~-~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~---~-~~~p~~~D~~~v~~~i~~-~~~~~l 168 (398)
+++|+|+|||||||+|+++ ..|++++|++|++.|+++|++.||+|++.+ + +++ ..|.++.++.+++ ++++++
T Consensus 5 ~~~V~I~DtTLRDG~Qs~~~~~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~--~~d~~e~l~~i~~~~~~~~l 82 (464)
T 2nx9_A 5 IKRVGVTDVVLRDAHQSLFATRLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFL--GEDPWQRLRLLKQAMPNTPL 82 (464)
T ss_dssp CCCCEEEECTTTHHHHHHSTTCCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTT--CCCHHHHHHHHHHHCSSSCE
T ss_pred CCCcEEEECCccccccCCCCcCCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhcc--CCCHHHHHHHHHHhCCCCeE
Confidence 4579999999999999986 589999999999999999999999998542 1 222 2578888888874 689999
Q ss_pred EEEeC--CH------------hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEe
Q 015894 169 PVLTP--NL------------KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLS 234 (398)
Q Consensus 169 ~~l~~--n~------------~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~ 234 (398)
++|+| |. .++++++++|++.|+||.++||. +++.+++++||+.|+.|+++++
T Consensus 83 ~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~Gvd~i~if~~~sd~--------------~ni~~~i~~ak~~G~~v~~~i~ 148 (464)
T 2nx9_A 83 QMLLRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDV--------------RNMQQALQAVKKMGAHAQGTLC 148 (464)
T ss_dssp EEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCT--------------HHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEeccccccCcccccchhhHHHHHHHHhCCcCEEEEEEecCHH--------------HHHHHHHHHHHHCCCEEEEEEE
Confidence 99996 32 34689999999999999999986 4567899999999999999998
Q ss_pred eeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHH
Q 015894 235 CVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASL 314 (398)
Q Consensus 235 ~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl 314 (398)
++++ .++++++++++++++.++||++|+||||+|+++|.+++++|+.+++++ +++|++|+|||+|||+||+++|+
T Consensus 149 ~~~~----~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv 223 (464)
T 2nx9_A 149 YTTS----PVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQV-DVELHLHCHSTAGLADMTLLKAI 223 (464)
T ss_dssp CCCC----TTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHC-CSCEEEEECCTTSCHHHHHHHHH
T ss_pred eeeC----CCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhc-CCeEEEEECCCCChHHHHHHHHH
Confidence 7664 457999999999999999999999999999999999999999999998 47899999999999999999999
Q ss_pred HhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCccChHHHHHHHHHHHHHhCCCCCCCcccccccc
Q 015894 315 QMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSKT 390 (398)
Q Consensus 315 ~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~pivG~~~ 390 (398)
++||++||+|++|+|+ |+||++||+++.+|+.+|+++++|+++|.+++++++++.+...|...+.+|.+.
T Consensus 224 ~AGa~~VD~ti~g~ge------rtGN~~lE~lv~~L~~~g~~tgidl~~L~~is~~v~~~~~~~~~~~~~~~g~~~ 293 (464)
T 2nx9_A 224 EAGVDRVDTAISSMSG------TYGHPATESLVATLQGTGYDTGLDIAKLEQIAAYFRDVRKKYHAFEGMMKGSDA 293 (464)
T ss_dssp HTTCSEEEEBCGGGCS------TTSCCBHHHHHHHHTTSTTCCCCCHHHHHHHHHHHHHHHHHTGGGCCSCCSCCT
T ss_pred HhCCCEEEEeccccCC------CCcCHHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHHhhcccccCCCcCCcC
Confidence 9999999999999999 999999999999999999999999999999999999999997776667777654
No 15
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=3.8e-52 Score=411.09 Aligned_cols=265 Identities=17% Similarity=0.128 Sum_probs=230.1
Q ss_pred ccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcc----cCCCCHHHHHHHHHhccCCcEEEEe
Q 015894 97 FVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWV----PQLADAKDVMAAIQNVEGARFPVLT 172 (398)
Q Consensus 97 ~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~----p~~~D~~~v~~~i~~~~~~~l~~l~ 172 (398)
+|+|+|||||||+|++++.|++++|++|++.|+++|+++||+|+|++|++. |++.+ +++++.+++.|++++++|+
T Consensus 2 ~V~I~DtTlRDG~Qs~~~~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~-~e~l~~i~~~~~~~~~~L~ 80 (320)
T 3dxi_A 2 SLKILDCTLRDGGYYTNWDFNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTP-VSVLKHLRNISTKKIAIML 80 (320)
T ss_dssp -CEEEECHHHHHGGGGTTCCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCC-HHHHHHHHHHCCSEEEEEE
T ss_pred eEEEEECCcCccccCCCCcCCHHHHHHHHHHHHHhCCCEEEEecccCCccccccccccCh-HHHHHHHhhccCCeEEEEe
Confidence 589999999999999999999999999999999999999999999988875 77765 6677777778999999999
Q ss_pred CCH----hhHH---HHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCC
Q 015894 173 PNL----KGFE---AAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMV 245 (398)
Q Consensus 173 ~n~----~~ie---~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~ 245 (398)
|+. ++++ .+.++|++.|+++.... .++.+.+++++||++|+.|+++++++ +|..
T Consensus 81 r~~~~~~~dv~~~~~a~~~Gvd~~ri~~~~~--------------nle~~~~~v~~ak~~G~~v~~~~~~~--~~~~--- 141 (320)
T 3dxi_A 81 NEKNTTPEDLNHLLLPIIGLVDMIRIAIDPQ--------------NIDRAIVLAKAIKTMGFEVGFNVMYM--SKWA--- 141 (320)
T ss_dssp EGGGCCGGGHHHHHGGGTTTCSEEEEEECGG--------------GHHHHHHHHHHHHTTTCEEEEEECCT--TTGG---
T ss_pred cCCCCChhhHHHHHHhhhcCCCEEEEEecHH--------------HHHHHHHHHHHHHHCCCEEEEEEEeC--CCCC---
Confidence 752 2444 44668999999997532 26777889999999999999888852 3322
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
++++++..+.+ .++|++.|+|+||+|.++|.+++++++.+++++| ++|++|+|||+|||+||+++|+++||++||+|+
T Consensus 142 ~~~~~l~~~~~-~~~G~~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~-~~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si 219 (320)
T 3dxi_A 142 EMNGFLSKLKA-IDKIADLFCMVDSFGGITPKEVKNLLKEVRKYTH-VPVGFHGHDNLQLGLINSITAIDDGIDFIDATI 219 (320)
T ss_dssp GSTTSGGGGGG-GTTTCSEEEEECTTSCCCHHHHHHHHHHHHHHCC-SCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBG
T ss_pred CHHHHHHHHHH-hhCCCCEEEECcccCCCCHHHHHHHHHHHHHhCC-CeEEEEeCCCCccHHHHHHHHHHhCCCEEEEec
Confidence 33334444444 3679999999999999999999999999999997 689999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCccChHHHHHHHHHHHHHhCCCCCCCcccccccccccccCC
Q 015894 326 SGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSKTSTANASK 397 (398)
Q Consensus 326 ~GlGecp~a~graGNa~lE~vv~~L~~~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~pivG~~~f~~~~s~ 397 (398)
+|||+ ++||++||+++++|+. ++++++|++.|.++.++++++. +++++|.++|. |+||
T Consensus 220 ~GlG~------~~GN~~~E~lv~~L~~-~~~~~~dl~~l~~~~~~~~~~~------~~~~~g~~~~~-~~sg 277 (320)
T 3dxi_A 220 TGMGR------GAGNLKMELLLTYLNK-HHGLNVDFNVLGNIITTFTPLL------EKYQWGTNLPY-MLSG 277 (320)
T ss_dssp GGCSS------TTCBCBHHHHHHHHHH-HSCCCCCHHHHHHHHHHHHHHH------HHHCCSCCHHH-HHHH
T ss_pred cccCC------cccchhHHHHHHHHHh-ccCCCcCHHHHHHHHHHHHHHH------HhcCCCCchhh-HHHh
Confidence 99999 9999999999999998 5667999999999999999986 78999999998 8875
No 16
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=100.00 E-value=4.9e-50 Score=431.24 Aligned_cols=281 Identities=17% Similarity=0.136 Sum_probs=245.2
Q ss_pred CCccEEEeCCCcccCCCCCC-CCCHHHHHHHHHHHHhcC--CCEEEEecCCCCC-cccC-CCCHHHHHHHHH-hccCCcE
Q 015894 95 PGFVKIVEVGPRDGLQNEKN-IVPAVVKVELIKLLVSSG--LAVVEATSFVSPK-WVPQ-LADAKDVMAAIQ-NVEGARF 168 (398)
Q Consensus 95 p~~I~i~D~TLRDG~Q~~~~-~~~~~~k~~ia~~L~~aG--v~~IEvG~~~~~~-~~p~-~~D~~~v~~~i~-~~~~~~l 168 (398)
+++|+|+|||||||+|+++. +|++++|++|++.|+++| ++.||+|...+-+ .+|. -.++++.++.++ .+|++++
T Consensus 100 ~~~I~I~DTTLRDG~Qs~~~~r~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~~l~~~~~~~~l 179 (718)
T 3bg3_A 100 HPGLLLMDTTFRDAHQSLLATRVRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELRELIPNIPF 179 (718)
T ss_dssp CCSCEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCSSSCE
T ss_pred cCCeEEeecCCChhhCCCCCcCCCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHHHHHHHcccchH
Confidence 35799999999999999975 599999999999999995 6669998111100 0000 146777777765 6789999
Q ss_pred EEEeCC--------------HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEe
Q 015894 169 PVLTPN--------------LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLS 234 (398)
Q Consensus 169 ~~l~~n--------------~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~ 234 (398)
++|.|. ..++++++++|++.|+||.++|+ +++++..++++++.|..|+++++
T Consensus 180 ~~l~R~~n~vgy~~~p~~~~~~~i~~a~~~Gvd~irIf~s~n~--------------l~~l~~~i~~ak~~G~~v~~~i~ 245 (718)
T 3bg3_A 180 QMLLRGANAVGYTNYPDNVVFKFCEVAKENGMDVFRVFDSLNY--------------LPNMLLGMEAAGSAGGVVEAAIS 245 (718)
T ss_dssp EEEECGGGTTSSSCCCHHHHHHHHHHHHHHTCCEEEEECSSCC--------------HHHHHHHHHHHHTTTSEEEEEEE
T ss_pred HHHhcccccccccccCCcchHHHHHHHHhcCcCEEEEEecHHH--------------HHHHHHHHHHHHHcCCeEEEEEE
Confidence 999863 25789999999999999999875 35778889999999999999999
Q ss_pred ee--ecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHH
Q 015894 235 CV--VGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILA 312 (398)
Q Consensus 235 ~~--fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANala 312 (398)
+. |.+|..+.+++++++++++++.++||++|+|+||+|+++|.+++++|+++++++|+++|++|+|||+|||+||+++
T Consensus 246 ~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANsla 325 (718)
T 3bg3_A 246 YTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLA 325 (718)
T ss_dssp CCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHH
T ss_pred eeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHH
Confidence 76 3455444569999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred HHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCccChHHHHHHHHHHHHHhCCCCCCC--cccccc--
Q 015894 313 SLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSK--TAIALS-- 388 (398)
Q Consensus 313 Al~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~--~pivG~-- 388 (398)
|+++||++||+|++|||| |+||++||+++++|+.+|+++++|+++|.+++++++++.+.+.|.+ .+++|.
T Consensus 326 AveAGa~~VD~ti~GlGe------rtGN~~lE~vv~~L~~~g~~tgidl~~L~~~s~~v~~~~~~~~~~~~~~~~~g~~~ 399 (718)
T 3bg3_A 326 CAQAGADVVDVAADSMSG------MTSQPSMGALVACTRGTPLDTEVPMERVFDYSEYWEGARGLYAAFDCTATMKSGNS 399 (718)
T ss_dssp HHHTTCSEEEEBCGGGCS------TTSCCBHHHHHHHHTTSTTCCCCCHHHHHHHHHHHHHHHHHTGGGCGGGTCCSCCT
T ss_pred HHHhCCCEEEecCccccc------ccCchhHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHhCCCcCCcCCcccccccc
Confidence 999999999999999999 9999999999999999999999999999999999999999999988 999998
Q ss_pred cccccccC
Q 015894 389 KTSTANAS 396 (398)
Q Consensus 389 ~~f~~~~s 396 (398)
++|. |+.
T Consensus 400 ~v~~-~e~ 406 (718)
T 3bg3_A 400 DVYE-NEI 406 (718)
T ss_dssp THHH-HCC
T ss_pred ceee-ccC
Confidence 5676 653
No 17
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=100.00 E-value=2.6e-46 Score=421.90 Aligned_cols=277 Identities=16% Similarity=0.121 Sum_probs=240.2
Q ss_pred CCccEEEeCCCcccCCCCCC-CCCHHHHHHHHHHHHhcCCC--EEEEe----cCCCCCcccCCCCHHHHHHHHH-hccCC
Q 015894 95 PGFVKIVEVGPRDGLQNEKN-IVPAVVKVELIKLLVSSGLA--VVEAT----SFVSPKWVPQLADAKDVMAAIQ-NVEGA 166 (398)
Q Consensus 95 p~~I~i~D~TLRDG~Q~~~~-~~~~~~k~~ia~~L~~aGv~--~IEvG----~~~~~~~~p~~~D~~~v~~~i~-~~~~~ 166 (398)
+++|+|+|||||||+|+++. .|++++|++|++.|+++|++ .||+| |++.-.+. ..++++.++.++ .+|++
T Consensus 548 ~~~v~i~DtTLRDG~Qs~~~~~~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~--~~~p~e~l~~~~~~~~~~ 625 (1165)
T 2qf7_A 548 EKRVLLTDTTMRDGHQSLLATRMRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFL--TEDPWERLALIREGAPNL 625 (1165)
T ss_dssp CSSCEEEECTTTHHHHHHHTTCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHH--CCCHHHHHHHHHHHCTTS
T ss_pred CCceEEEecccccccccCCcccCCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhc--CCCHHHHHHHHHHHchhh
Confidence 35799999999999999975 69999999999999999655 59984 33210010 146777777766 67899
Q ss_pred cEEEEeCC--------------HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEE
Q 015894 167 RFPVLTPN--------------LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGY 232 (398)
Q Consensus 167 ~l~~l~~n--------------~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~ 232 (398)
++++|.|. ..++++++++|++.|+||.++|+ +++++..++++++.|..|+++
T Consensus 626 ~~~~l~R~~n~vg~~~~~~~~~~~~i~~a~~~g~d~irif~sl~~--------------~~~~~~~i~~~~~~g~~v~~~ 691 (1165)
T 2qf7_A 626 LLQMLLRGANGVGYTNYPDNVVKYFVRQAAKGGIDLFRVFDCLNW--------------VENMRVSMDAIAEENKLCEAA 691 (1165)
T ss_dssp EEEEEEETTTBTCSSCCCHHHHHHHHHHHHHHTCCEEEEECTTCC--------------GGGGHHHHHHHHHTTCEEEEE
T ss_pred HHHHHhccccccccccCCchhHHHHHHHHHhcCcCEEEEEeeHHH--------------HHHHHHHHHHHHhccceEEEE
Confidence 99999752 25789999999999999998875 356778899999999999999
Q ss_pred Eeee--ecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHH
Q 015894 233 LSCV--VGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNI 310 (398)
Q Consensus 233 l~~~--fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANa 310 (398)
++++ |.+|..+.++++|++++++++.++|+++|+||||+|+++|.+++++|+.+++++ +++|++|+|||+|||+||+
T Consensus 692 i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAn~ 770 (1165)
T 2qf7_A 692 ICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREAT-GLPIHFHTHDTSGIAAATV 770 (1165)
T ss_dssp EECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC-SSCEEEEECBTTSCHHHHH
T ss_pred EEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHH
Confidence 9876 344433448999999999999999999999999999999999999999999999 5789999999999999999
Q ss_pred HHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCccChHHHHHHHHHHHHHhCCCCCCCccccccc-
Q 015894 311 LASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSK- 389 (398)
Q Consensus 311 laAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~pivG~~- 389 (398)
++|+++||++||+|++|||| |+||++||+++++|+.+|+++++|+++|.+++++++++.+...|...+++|.+
T Consensus 771 laAv~aGa~~vd~ti~GlGe------~~Gn~~le~vv~~L~~~g~~tgidl~~L~~~s~~~~~~~~~~~~~~~~~~~~~~ 844 (1165)
T 2qf7_A 771 LAAVEAGVDAVDAAMDALSG------NTSQPCLGSIVEALSGSERDPGLDPAWIRRISFYWEAVRNQYAAFESDLKGPAS 844 (1165)
T ss_dssp HHHHHTTCSEEEEBCGGGCS------BTSCCBHHHHHHHHTTSTTCCCCCHHHHHHHHHHHHHHHGGGGGGCCCCCSCCT
T ss_pred HHHHHhCCCEEEecccccCC------CccchhHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHhhhccCCCCCccCCcc
Confidence 99999999999999999999 99999999999999999999999999999999999999999888777888854
Q ss_pred -cccccc
Q 015894 390 -TSTANA 395 (398)
Q Consensus 390 -~f~~~~ 395 (398)
++. |+
T Consensus 845 ~v~~-~~ 850 (1165)
T 2qf7_A 845 EVYL-HE 850 (1165)
T ss_dssp THHH-HC
T ss_pred ceEe-cc
Confidence 455 44
No 18
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=100.00 E-value=3.5e-45 Score=412.07 Aligned_cols=277 Identities=16% Similarity=0.158 Sum_probs=243.2
Q ss_pred CCccEEEeCCCcccCCCCCCC-CCHHHHHHHHHHHHhc--CCCEEEEecCCC-CCcccCC-CCHHHHHHHHH-hccCCcE
Q 015894 95 PGFVKIVEVGPRDGLQNEKNI-VPAVVKVELIKLLVSS--GLAVVEATSFVS-PKWVPQL-ADAKDVMAAIQ-NVEGARF 168 (398)
Q Consensus 95 p~~I~i~D~TLRDG~Q~~~~~-~~~~~k~~ia~~L~~a--Gv~~IEvG~~~~-~~~~p~~-~D~~~v~~~i~-~~~~~~l 168 (398)
.++|+|+|||||||+|++++. |++++|++|++.|+++ |+..||++.... .-.+|++ .|+++.++.++ .+|++++
T Consensus 530 ~~~v~I~DtTlRDG~Qs~~~~r~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l~~l~~~~~~~~~ 609 (1150)
T 3hbl_A 530 QDDVLLTDTTFRDAHQSLLATRVRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNVLF 609 (1150)
T ss_dssp CSSBEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCCSSEE
T ss_pred CCceEEEECccchhhccCCCcCCCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCCHHHHHHHHHHhCCCCeE
Confidence 357999999999999999875 9999999999999999 999999962211 1112344 58888888887 5789999
Q ss_pred EEEeCC--------------HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEe
Q 015894 169 PVLTPN--------------LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLS 234 (398)
Q Consensus 169 ~~l~~n--------------~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~ 234 (398)
++|+|. .+++++|.++|++.||+|+++||.|.. +..++.+++.|..+++.+|
T Consensus 610 ~~l~R~~n~vgy~~~pd~v~~~~v~~a~~~Gvd~irif~~~sd~~~~--------------~~~~~~~~e~g~~~~~~i~ 675 (1150)
T 3hbl_A 610 QMLLRASNAVGYKNYPDNVIHKFVQESAKAGIDVFRIFDSLNWVDQM--------------KVANEAVQEAGKISEGTIC 675 (1150)
T ss_dssp EEEEETTTBTCSSCCCHHHHHHHHHHHHHTTCCEEEEECTTCCGGGG--------------HHHHHHHHHTTCEEEEEEE
T ss_pred EEEeccccccccccCCchhHHHHHHHHHhCCcCEEEEEeeCCHHHHH--------------HHHHHHHHHHhhheeEEEe
Confidence 999963 235889999999999999999998643 3567788889999999999
Q ss_pred ee---ecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHH
Q 015894 235 CV---VGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNIL 311 (398)
Q Consensus 235 ~~---fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANal 311 (398)
++ ++.++.++++++|+.++++++.++|+++|+|+||+|+++|.+++++|+.+++++ +++|++|+|||+|||+||++
T Consensus 676 ~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~-~~~i~~H~Hnt~G~a~An~l 754 (1150)
T 3hbl_A 676 YTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV-DLPIHLHTHDTSGNGLLTYK 754 (1150)
T ss_dssp CCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC-CSCEEEEECBTTSCHHHHHH
T ss_pred ecccccChhhcCCCCHHHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhc-CCeEEEEeCCCCcHHHHHHH
Confidence 87 655667789999999999999999999999999999999999999999999997 57999999999999999999
Q ss_pred HHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCccChHHHHHHHHHHHHHhCCCCCCCccccccc--
Q 015894 312 ASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSK-- 389 (398)
Q Consensus 312 aAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~t~iDl~~L~~~~~~v~~~~g~~~~~~~pivG~~-- 389 (398)
+|+++||++||+|++|||| ++||++||+++++|+.+|+++++|+++|.+++++++++.+.-.|...++.|.+
T Consensus 755 aA~~aGa~~vD~ai~GlG~------~~gn~~lE~lv~~L~~~g~~tgidl~~l~~~~~~~~~~~~~y~~~~~~~~~~~~~ 828 (1150)
T 3hbl_A 755 QAIDAGVDIIDTAVASMSG------LTSQPSANSLYYALNGFPRHLRTDIEGMESLSHYWSTVRTYYSDFESDIKSPNTE 828 (1150)
T ss_dssp HHHHTTCSEEEEBCGGGCS------BTSCCBHHHHHHHTTTSSCCBCSCHHHHHHHHHHHHHHHGGGGGGCCSCCSCCTT
T ss_pred HHHHhCCCEEEEeccccCC------CCCCccHHHHHHHHHhcCCCcCccHHHHHHHHHHHHHHHhhhccccCCCCCCccc
Confidence 9999999999999999999 99999999999999999999999999999999999999987766666666654
Q ss_pred ccc
Q 015894 390 TST 392 (398)
Q Consensus 390 ~f~ 392 (398)
++.
T Consensus 829 v~~ 831 (1150)
T 3hbl_A 829 IYQ 831 (1150)
T ss_dssp HHH
T ss_pred eEE
Confidence 455
No 19
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.74 E-value=1.4e-07 Score=90.02 Aligned_cols=173 Identities=13% Similarity=0.129 Sum_probs=111.2
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCH-----------------HHH---HHHHHh-ccCCcEEEEeC
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADA-----------------KDV---MAAIQN-VEGARFPVLTP 173 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~-----------------~~v---~~~i~~-~~~~~l~~l~~ 173 (398)
..+.+..+++++.|.+.|+|.||+|.|.+.+ ++|. +.+ .+.+++ .|++.+..+..
T Consensus 27 ~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP----~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y 102 (262)
T 2ekc_A 27 YPDYETSLKAFKEVLKNGTDILEIGFPFSDP----VADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTY 102 (262)
T ss_dssp SSCHHHHHHHHHHHHHTTCSEEEEECCCSCC----TTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECC
T ss_pred CCChHHHHHHHHHHHHcCCCEEEECCCCCCc----ccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEec
Confidence 4667889999999999999999999876532 1221 112 333332 33666666643
Q ss_pred -C-------HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCC
Q 015894 174 -N-------LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMV 245 (398)
Q Consensus 174 -n-------~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~ 245 (398)
| .+.++.+.++|++.+.+..- . ++.+.+.++.++++|+.+.. ++ .|. +
T Consensus 103 ~n~v~~~g~~~f~~~~~~aG~dgvii~dl------------~----~ee~~~~~~~~~~~gl~~i~-l~----~p~---t 158 (262)
T 2ekc_A 103 YNPIFRIGLEKFCRLSREKGIDGFIVPDL------------P----PEEAEELKAVMKKYVLSFVP-LG----APT---S 158 (262)
T ss_dssp HHHHHHHCHHHHHHHHHHTTCCEEECTTC------------C----HHHHHHHHHHHHHTTCEECC-EE----CTT---C
T ss_pred CcHHHHhhHHHHHHHHHHcCCCEEEECCC------------C----HHHHHHHHHHHHHcCCcEEE-Ee----CCC---C
Confidence 3 23467888999998777421 1 24466778999999987531 11 232 4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHH---HHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEE
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGT---VIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTV 321 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~---v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~V 321 (398)
+++.+..+++..... +..+.+.+++|..+|.. +.++++.+++.. +.|+.+ .+|...++.++++.+||+.|
T Consensus 159 ~~~rl~~ia~~a~gf-iy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv~v----G~GI~t~e~~~~~~~gADgv 231 (262)
T 2ekc_A 159 TRKRIKLICEAADEM-TYFVSVTGTTGAREKLPYERIKKKVEEYRELC-DKPVVV----GFGVSKKEHAREIGSFADGV 231 (262)
T ss_dssp CHHHHHHHHHHCSSC-EEEESSCC---------CHHHHHHHHHHHHHC-CSCEEE----ESSCCSHHHHHHHHTTSSEE
T ss_pred CHHHHHHHHHhCCCC-EEEEecCCccCCCCCcCcccHHHHHHHHHhhc-CCCEEE----eCCCCCHHHHHHHHcCCCEE
Confidence 567777776544211 34556678999998855 889999999876 456777 88999889999999999854
No 20
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=98.69 E-value=1.5e-06 Score=85.49 Aligned_cols=228 Identities=12% Similarity=0.095 Sum_probs=149.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--CCHhhHHHHHHcCCCEEEE
Q 015894 114 NIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--PNLKGFEAAVAAGAKEVAI 191 (398)
Q Consensus 114 ~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~n~~~ie~a~~~Gv~~v~i 191 (398)
..++.++.++.++.+.+.|+..|-++....|.+.+...+..++++.+++..+..+..-. .+.+.++...++|++.+.+
T Consensus 89 ~~ls~eei~~~~~~~~~~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i~i~~s~g~~~~e~l~~L~~aG~~~i~i 168 (350)
T 3t7v_A 89 YRLTMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPIMISPGLMDNATLLKAREKGANFLAL 168 (350)
T ss_dssp CBCCHHHHHHHHHHHTTSCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCSCEEEECSSCCHHHHHHHHHTTEEEEEC
T ss_pred eeCCHHHHHHHHHHHHHCCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcCceEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 34799999999999999999998886544332211111223444444432244443211 2567789999999998887
Q ss_pred eccCc-hH-HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE--
Q 015894 192 FASAS-ES-FSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL-- 267 (398)
Q Consensus 192 ~~~~S-d~-~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L-- 267 (398)
..-.. +- +.+..-+.+. +...++++.+++.|+.+..+++ +|. . -+++.+.+.++.+.+++++.+.+
T Consensus 169 ~lEt~~~~~~~~i~~~~~~----~~~l~~i~~a~~~Gi~v~~~~i--~Gl-g---et~e~~~~~l~~l~~l~~~~v~~~~ 238 (350)
T 3t7v_A 169 YQETYDTELYRKLRVGQSF----DGRVNARRFAKQQGYCVEDGIL--TGV-G---NDIESTILSLRGMSTNDPDMVRVMT 238 (350)
T ss_dssp CCBCSCHHHHHHHSTTCCH----HHHHHHHHHHHHHTCEEEEEEE--ESS-S---CCHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred eeecCCHHHHHHhCCCCCH----HHHHHHHHHHHHcCCeEccceE--eec-C---CCHHHHHHHHHHHHhCCCCEEEecc
Confidence 55543 32 2222223344 4455667889999999876666 553 1 25788889999999999987654
Q ss_pred ----ccCc----CcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCC-CC
Q 015894 268 ----GDTI----GVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKG-AS 338 (398)
Q Consensus 268 ----~DT~----G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~g-ra 338 (398)
++|- ...++.++.++++..|-.+|...|-.-. .-++......|+.+||+.+.+++..-- .+.| ..
T Consensus 239 f~p~~gT~l~~~~~~~~~e~l~~ia~~Rl~lp~~~I~a~~---~~~g~~~~~~~l~~Gan~~~~~~~~~~---~~ag~~~ 312 (350)
T 3t7v_A 239 FLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKRLIPASL---DLEGIDGMVLRLNAGANIVTSILPPDS---QLEGVAN 312 (350)
T ss_dssp CCCCTTSTTTTCCCCCCCCHHHHHHHHHHHSTTSBCEEEH---HHHHHHHHHHHHHTTCCEEEEECCSSC---CCCCSSC
T ss_pred eeeCCCCcCccCCCCChHHHHHHHHHHHHhCCCcCccccc---cccChhHHHHHHhcCCceecCCCCCCC---CCCCCCC
Confidence 2331 2345678889999999888875444322 233446788999999999999987662 1112 11
Q ss_pred -------CCccHHHHHHHHHhCCCCC
Q 015894 339 -------GNVATEDVVYMLNGLGVRT 357 (398)
Q Consensus 339 -------GNa~lE~vv~~L~~~Gi~t 357 (398)
++.+.++++..++..|+.+
T Consensus 313 ~~~~~~~~~~~~~~~~~~i~~~G~~~ 338 (350)
T 3t7v_A 313 YDRDLEERDRDIKSVVRRLEIMGMKP 338 (350)
T ss_dssp TTTTCSSCCCCHHHHHHHHHHHTCEE
T ss_pred CcccchhccCCHHHHHHHHHHcCCcc
Confidence 3678999999999988743
No 21
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.29 E-value=5e-06 Score=79.93 Aligned_cols=176 Identities=16% Similarity=0.169 Sum_probs=109.2
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcc--cCCC-----------CHHHHHHHHH---hc-cCCcEEEEeC-CH-
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWV--PQLA-----------DAKDVMAAIQ---NV-EGARFPVLTP-NL- 175 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~--p~~~-----------D~~~v~~~i~---~~-~~~~l~~l~~-n~- 175 (398)
..+.+.-+++++.|.+.|+|.||+|.|.+.+.. |... ..+.+++.++ +. +++.+..|+. |.
T Consensus 30 dP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v 109 (271)
T 3nav_A 30 DPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLV 109 (271)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHH
Confidence 346788899999999999999999988763211 1110 1223344444 22 5667776763 42
Q ss_pred --hh----HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHH
Q 015894 176 --KG----FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSK 249 (398)
Q Consensus 176 --~~----ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~ 249 (398)
-+ ++.+.++|++.+-+.+-. . +...+.++.++++|+.+.. ++ .| .++++.
T Consensus 110 ~~~g~~~f~~~~~~aGvdGvIipDlp------------~----ee~~~~~~~~~~~gl~~I~-lv----ap---~t~~er 165 (271)
T 3nav_A 110 YARGIDDFYQRCQKAGVDSVLIADVP------------T----NESQPFVAAAEKFGIQPIF-IA----PP---TASDET 165 (271)
T ss_dssp HHTCHHHHHHHHHHHTCCEEEETTSC------------G----GGCHHHHHHHHHTTCEEEE-EE----CT---TCCHHH
T ss_pred HHHhHHHHHHHHHHCCCCEEEECCCC------------H----HHHHHHHHHHHHcCCeEEE-EE----CC---CCCHHH
Confidence 12 567889999998884321 1 2245778899999998532 22 12 245666
Q ss_pred HHHHHHHHHhCC-CCEEEEccCcCcCC--HHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHH-HHHhCCCEE
Q 015894 250 VAYVSKQLYDMG-CSEISLGDTIGVGT--PGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILA-SLQMGISTV 321 (398)
Q Consensus 250 l~~~a~~l~~~G-ad~I~L~DT~G~~~--P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANala-Al~aGa~~V 321 (398)
+..+++.. -| +..+.+.++.|... |..+.++++.+|+.. +.|+.+ .+|........ ++.+||+.|
T Consensus 166 i~~i~~~~--~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~v----GfGIst~e~~~~~~~~gADgv 234 (271)
T 3nav_A 166 LRAVAQLG--KGYTYLLSRAGVTGAETKANMPVHALLERLQQFD-APPALL----GFGISEPAQVKQAIEAGAAGA 234 (271)
T ss_dssp HHHHHHHC--CSCEEECCCC--------CCHHHHHHHHHHHHTT-CCCEEE----CSSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHC--CCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc-CCCEEE----ECCCCCHHHHHHHHHcCCCEE
Confidence 65555431 12 23344567788764 778999999999876 356666 67777677777 899999855
No 22
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.23 E-value=6e-06 Score=79.21 Aligned_cols=174 Identities=18% Similarity=0.193 Sum_probs=108.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcc--c--CC---------CCHHHHHHHH---Hhc-cCCcEEEEeC-CH-
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWV--P--QL---------ADAKDVMAAI---QNV-EGARFPVLTP-NL- 175 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~--p--~~---------~D~~~v~~~i---~~~-~~~~l~~l~~-n~- 175 (398)
..+.+.-.++++.|.+.|+|.||+|.|.+.+.. | |. ...+.+++.+ |+. .++.+..++. |.
T Consensus 28 dP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv 107 (267)
T 3vnd_A 28 DPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLV 107 (267)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHH
Confidence 456788899999999999999999987653211 1 00 0112333333 332 4566666664 53
Q ss_pred --hh----HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHH
Q 015894 176 --KG----FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSK 249 (398)
Q Consensus 176 --~~----ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~ 249 (398)
-+ ++.+.++|++.+-+.+-. ++...+.++.++++|+.+.. ++ .| .++++.
T Consensus 108 ~~~g~e~f~~~~~~aGvdgvii~Dlp----------------~ee~~~~~~~~~~~gl~~i~-li----aP---~t~~er 163 (267)
T 3vnd_A 108 FANGIDEFYTKAQAAGVDSVLIADVP----------------VEESAPFSKAAKAHGIAPIF-IA----PP---NADADT 163 (267)
T ss_dssp HHHCHHHHHHHHHHHTCCEEEETTSC----------------GGGCHHHHHHHHHTTCEEEC-EE----CT---TCCHHH
T ss_pred HHhhHHHHHHHHHHcCCCEEEeCCCC----------------HhhHHHHHHHHHHcCCeEEE-EE----CC---CCCHHH
Confidence 12 567889999998885321 12345778899999998642 21 12 245566
Q ss_pred HHHHHHHHHhCCCCEEE---EccCcCcCC--HHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHH-HHHhCCCEE
Q 015894 250 VAYVSKQLYDMGCSEIS---LGDTIGVGT--PGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILA-SLQMGISTV 321 (398)
Q Consensus 250 l~~~a~~l~~~Gad~I~---L~DT~G~~~--P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANala-Al~aGa~~V 321 (398)
+..+++ .+-.-|+ +..+.|... |..+.++++.+|+... .|+.+ .+|........ ++.+||+.|
T Consensus 164 i~~i~~----~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~-~pv~v----GfGI~~~e~~~~~~~~gADgv 232 (267)
T 3vnd_A 164 LKMVSE----QGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNA-PPPLL----GFGIAEPEQVRAAIKAGAAGA 232 (267)
T ss_dssp HHHHHH----HCCSCEEESCCCCCC--------CHHHHHHHHHTTTC-CCEEE----CSSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHH----hCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcC-CCEEE----ECCcCCHHHHHHHHHcCCCEE
Confidence 555544 3333344 466677663 6779999999998753 56776 77777666666 999999865
No 23
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.22 E-value=8.7e-06 Score=77.74 Aligned_cols=173 Identities=14% Similarity=0.093 Sum_probs=110.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHH--------------------HHHHHHHhc-cCCcEEEEe-
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAK--------------------DVMAAIQNV-EGARFPVLT- 172 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~--------------------~v~~~i~~~-~~~~l~~l~- 172 (398)
.++.+...++++.|.++|+|.||+|.|.+.+. .|.. ++++.+++. +++.+..++
T Consensus 27 dp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~----~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y 102 (268)
T 1qop_A 27 DPGIEQSLKIIDTLIDAGADALELGVPFSDPL----ADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMY 102 (268)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCT----TCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCcc----CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEc
Confidence 56678899999999999999999998765321 1211 234444444 455655554
Q ss_pred CC-------HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCC
Q 015894 173 PN-------LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMV 245 (398)
Q Consensus 173 ~n-------~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~ 245 (398)
.| .+.++.+.++|++.+.+..-.. +.+.+.++.++++|+.+.. ++ .|. +
T Consensus 103 ~n~v~~~g~~~~~~~~~~aGadgii~~d~~~----------------e~~~~~~~~~~~~g~~~i~-l~----~p~---t 158 (268)
T 1qop_A 103 ANLVFNNGIDAFYARCEQVGVDSVLVADVPV----------------EESAPFRQAALRHNIAPIF-IC----PPN---A 158 (268)
T ss_dssp HHHHHTTCHHHHHHHHHHHTCCEEEETTCCG----------------GGCHHHHHHHHHTTCEEEC-EE----CTT---C
T ss_pred ccHHHHhhHHHHHHHHHHcCCCEEEEcCCCH----------------HHHHHHHHHHHHcCCcEEE-EE----CCC---C
Confidence 23 2457788999999887753321 3345677889999987632 11 232 4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEccCcCcCCH--HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHH-HHHHHHhCCCEE
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGDTIGVGTP--GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSN-ILASLQMGISTV 321 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P--~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~AN-alaAl~aGa~~V 321 (398)
+.+.+..+++..... +..+.+..+.|..+| ..+.++++.+++.. +.+|.+ +.|...++ +..++.+||+.|
T Consensus 159 ~~~~i~~i~~~~~g~-v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~-~~pi~v----ggGI~t~e~~~~~~~agAD~v 231 (268)
T 1qop_A 159 DDDLLRQVASYGRGY-TYLLSRSGVTGAENRGALPLHHLIEKLKEYH-AAPALQ----GFGISSPEQVSAAVRAGAAGA 231 (268)
T ss_dssp CHHHHHHHHHHCCSC-EEEESSSSCCCSSSCC--CCHHHHHHHHHTT-CCCEEE----ESSCCSHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHhhCCCc-EEEEecCCcCCCccCCCchHHHHHHHHHhcc-CCcEEE----ECCCCCHHHHHHHHHcCCCEE
Confidence 566666665442211 223345567787544 55778899998865 456776 78888555 445599999855
No 24
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.15 E-value=8.3e-06 Score=74.33 Aligned_cols=170 Identities=14% Similarity=0.118 Sum_probs=109.4
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc-cCCcEEE---EeCCHhh-HHHHHHcCCCEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV-EGARFPV---LTPNLKG-FEAAVAAGAKEV 189 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~-~~~~l~~---l~~n~~~-ie~a~~~Gv~~v 189 (398)
..+.++.+++++.|. .|++.||+|.+.+- ....++++.+++. ++..+.+ +....+. ++.++++|++.|
T Consensus 9 ~~~~~~~~~~~~~~~-~~~diie~G~p~~~------~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v 81 (211)
T 3f4w_A 9 ELTLPEAMVFMDKVV-DDVDIIEVGTPFLI------REGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYV 81 (211)
T ss_dssp SCCHHHHHHHHHHHG-GGCSEEEECHHHHH------HHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEE
T ss_pred CCCHHHHHHHHHHhh-cCccEEEeCcHHHH------hccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEE
Confidence 356788899999996 69999999974210 1112456666654 6665532 2233444 889999999999
Q ss_pred EEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcc
Q 015894 190 AIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGD 269 (398)
Q Consensus 190 ~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~D 269 (398)
.+.....+ +.+.++++.++++|+.+.+.+. +| .++ .+.++.+.+.|++.|++.
T Consensus 82 ~v~~~~~~---------------~~~~~~~~~~~~~g~~~~v~~~----~~----~t~---~~~~~~~~~~g~d~i~v~- 134 (211)
T 3f4w_A 82 TVLGVTDV---------------LTIQSCIRAAKEAGKQVVVDMI----CV----DDL---PARVRLLEEAGADMLAVH- 134 (211)
T ss_dssp EEETTSCH---------------HHHHHHHHHHHHHTCEEEEECT----TC----SSH---HHHHHHHHHHTCCEEEEE-
T ss_pred EEeCCCCh---------------hHHHHHHHHHHHcCCeEEEEec----CC----CCH---HHHHHHHHHcCCCEEEEc-
Confidence 98654321 3345678888899987753211 12 222 345667778999998773
Q ss_pred CcCc---CCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 270 TIGV---GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 270 T~G~---~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
.|. ..+....+.++.+++.+|..++.+ +.|....|+..++++||+.|=+
T Consensus 135 -~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~----~gGI~~~~~~~~~~~Gad~vvv 186 (211)
T 3f4w_A 135 -TGTDQQAAGRKPIDDLITMLKVRRKARIAV----AGGISSQTVKDYALLGPDVVIV 186 (211)
T ss_dssp -CCHHHHHTTCCSHHHHHHHHHHCSSCEEEE----ESSCCTTTHHHHHTTCCSEEEE
T ss_pred -CCCcccccCCCCHHHHHHHHHHcCCCcEEE----ECCCCHHHHHHHHHcCCCEEEE
Confidence 221 111123467788888776667766 4555567888889999996643
No 25
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=98.07 E-value=0.00058 Score=66.47 Aligned_cols=230 Identities=16% Similarity=0.111 Sum_probs=140.0
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--CCHhhHHHHHHcCCCEEEEe
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--PNLKGFEAAVAAGAKEVAIF 192 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~n~~~ie~a~~~Gv~~v~i~ 192 (398)
.++.++.++.++.+.+.|+..|-++..-.|. .+ ..+..++++.+++. +..+..-. .+.+.++...++|++.+.+.
T Consensus 83 ~ls~eei~~~i~~~~~~g~~~i~~~gGe~p~-~~-~~~~~~li~~i~~~-~~~i~~s~g~l~~e~l~~L~~ag~~~v~i~ 159 (348)
T 3iix_A 83 RMTPEEIVERARLAVQFGAKTIVLQSGEDPY-XM-PDVISDIVKEIKKM-GVAVTLSLGEWPREYYEKWKEAGADRYLLR 159 (348)
T ss_dssp BCCHHHHHHHHHHHHHTTCSEEEEEESCCGG-GT-THHHHHHHHHHHTT-SCEEEEECCCCCHHHHHHHHHHTCCEEECC
T ss_pred eCCHHHHHHHHHHHHHCCCCEEEEEeCCCCC-cc-HHHHHHHHHHHHhc-CceEEEecCCCCHHHHHHHHHhCCCEEeee
Confidence 4789999999999999999998886533221 11 11233444444433 44443111 24677889999999999876
Q ss_pred ccCc-hHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE----
Q 015894 193 ASAS-ESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL---- 267 (398)
Q Consensus 193 ~~~S-d~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L---- 267 (398)
+-.. +-..+ .++... ..+...+.++.+++.|+.+...++ +|.|.. +.+.+.+.++.+.++|++.+.+
T Consensus 160 let~~~~~~~-~i~~~~--~~~~~~~~i~~~~~~Gi~v~~~~i--~G~p~e---t~e~~~~~~~~l~~l~~~~i~i~~~~ 231 (348)
T 3iix_A 160 HETANPVLHR-KLRPDT--SFENRLNCLLTLKELGYETGAGSM--VGLPGQ---TIDDLVDDLLFLKEHDFDMVGIGPFI 231 (348)
T ss_dssp CBCSCHHHHH-HHSTTS--CHHHHHHHHHHHHHTTCEEEECBE--ESCTTC---CHHHHHHHHHHHHHHTCSEECCEECC
T ss_pred eeeCCHHHHH-HhCCCc--CHHHHHHHHHHHHHhCCeeccceE--EeCCCC---CHHHHHHHHHHHHhcCCCEEeeeeee
Confidence 5544 32222 232211 345556677889999998775554 665543 6788888899999989886543
Q ss_pred --ccCc----CcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccch---HHHHHHHHHHhCCCEEee--ccccCCCCCCC--
Q 015894 268 --GDTI----GVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQ---ALSNILASLQMGISTVDS--SVSGLGGCPYA-- 334 (398)
Q Consensus 268 --~DT~----G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~Gl---A~ANalaAl~aGa~~VD~--Sv~GlGecp~a-- 334 (398)
++|- ...++.++..+++.+|..+|...|- .+.+. .......|+.+||+.|-. |..+.-+ .|.
T Consensus 232 p~~gt~l~~~~~~~~~e~~~~~a~~R~~lp~~~i~----~~~~~~~~~~~~~~~~l~~Gan~i~~~~~~~~~~~-~~~~~ 306 (348)
T 3iix_A 232 PHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIP----ATTAMGTIVPGGREITLRCGANVIMPNWTPSPYRQ-LYQLY 306 (348)
T ss_dssp CCTTSTTTTSCCCCHHHHHHHHHHHHHHSTTSBCB----CCHHHHHHSTTHHHHHHTTTCCEECCBCCCTTTGG-GCCSS
T ss_pred cCCCCCcccCCCCCHHHHHHHHHHHHHHCCCCCch----hcchhhhcCHHHHHHHHhcCCcEEeCCCCchhccc-ccccC
Confidence 3332 2345688889999999888874222 22221 223356788999998863 3333211 000
Q ss_pred -C----CCCCCccHHHHHHHHHhCCCCCccC
Q 015894 335 -K----GASGNVATEDVVYMLNGLGVRTNVD 360 (398)
Q Consensus 335 -~----graGNa~lE~vv~~L~~~Gi~t~iD 360 (398)
. +-.-.-+.++++..++..|+.+.++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 337 (348)
T 3iix_A 307 PGKICVFEKDTACIPCVMKMIELLGRKPGRD 337 (348)
T ss_dssp SCCTTTTSCTTCHHHHHHHHHHHTTCEECSS
T ss_pred CCCcccCCCchhhHHHHHHHHHHcCCEeCCC
Confidence 0 1112345777888888777755443
No 26
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.89 E-value=0.0002 Score=67.73 Aligned_cols=176 Identities=14% Similarity=0.163 Sum_probs=108.2
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCc-----cc--------CCCCHHHH---HHHHHhccCCcEEEEeC-CH--
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKW-----VP--------QLADAKDV---MAAIQNVEGARFPVLTP-NL-- 175 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~-----~p--------~~~D~~~v---~~~i~~~~~~~l~~l~~-n~-- 175 (398)
.++.+...++++.|.+.|++.||+|.+.+.+. ++ .-.+.+.. .+.+++..++.+..+.. |.
T Consensus 28 ~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~m~~~~~~~ 107 (262)
T 1rd5_A 28 DPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIM 107 (262)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEEECCSHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHH
Confidence 34568889999999999999999997654210 00 00123323 33444444555555543 42
Q ss_pred -hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHH
Q 015894 176 -KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVS 254 (398)
Q Consensus 176 -~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a 254 (398)
.+++.+.++|++.|.+..-.. +.+.+.++.++++|+.+...++ | .++.+.+..+.
T Consensus 108 ~~~~~~a~~aGadgv~v~d~~~----------------~~~~~~~~~~~~~g~~~i~~~a-----~---~t~~e~~~~~~ 163 (262)
T 1rd5_A 108 FRSLAKMKEAGVHGLIVPDLPY----------------VAAHSLWSEAKNNNLELVLLTT-----P---AIPEDRMKEIT 163 (262)
T ss_dssp SCCTHHHHHTTCCEEECTTCBT----------------TTHHHHHHHHHHTTCEECEEEC-----T---TSCHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCh----------------hhHHHHHHHHHHcCCceEEEEC-----C---CCCHHHHHHHH
Confidence 256779999999988743211 2345677888999988542222 2 23455544443
Q ss_pred HHHHhCCCCEEEE---ccCcCc--CCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH-HHHHHHHHHhCCCEEee
Q 015894 255 KQLYDMGCSEISL---GDTIGV--GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA-LSNILASLQMGISTVDS 323 (398)
Q Consensus 255 ~~l~~~Gad~I~L---~DT~G~--~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA-~ANalaAl~aGa~~VD~ 323 (398)
. .+.+.+++ ..+.|. ..|....++++.+++... +||.+ +.|.. ..|+.+.+.+||+.|-+
T Consensus 164 ~----~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~-~pI~v----gGGI~~~e~~~~~~~~GAdgvvV 229 (262)
T 1rd5_A 164 K----ASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTN-KPVAV----GFGISKPEHVKQIAQWGADGVII 229 (262)
T ss_dssp H----HCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCS-SCEEE----ESCCCSHHHHHHHHHTTCSEEEE
T ss_pred h----cCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhcC-CeEEE----ECCcCCHHHHHHHHHcCCCEEEE
Confidence 3 33333433 344555 334567788999988753 46666 78888 67777778899997653
No 27
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=97.71 E-value=0.0054 Score=60.51 Aligned_cols=218 Identities=15% Similarity=0.060 Sum_probs=139.3
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCC-CCCcccCCCCHHHHHHHHHhc--cCCcEEEEeC---CHhhHHHHHHcCCCE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFV-SPKWVPQLADAKDVMAAIQNV--EGARFPVLTP---NLKGFEAAVAAGAKE 188 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~-~~~~~p~~~D~~~v~~~i~~~--~~~~l~~l~~---n~~~ie~a~~~Gv~~ 188 (398)
.++.++.++.++.+.+.|+..|-++... .|. ..+.+.+.+.++.+ .+..+. +.. +.+.++...++|++.
T Consensus 98 ~~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~----~~~~~~l~~ll~~ik~~g~~i~-~t~G~l~~e~l~~L~~aGvd~ 172 (369)
T 1r30_A 98 LMEVEQVLESARKAKAAGSTRFCMGAAWKNPH----ERDMPYLEQMVQGVKAMGLEAC-MTLGTLSESQAQRLANAGLDY 172 (369)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECCSSCC----TTTHHHHHHHHHHHHHTTSEEE-EECSSCCHHHHHHHHHHCCCE
T ss_pred cCCHHHHHHHHHHHHHcCCcEEEEEeCCCCCC----cCCHHHHHHHHHHHHHcCCeEE-EecCCCCHHHHHHHHHCCCCE
Confidence 4789999999999999999998886432 121 12344455555432 244543 332 456788889999999
Q ss_pred EEEeccCchHHHhhhcC-CCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCC--CCEE
Q 015894 189 VAIFASASESFSKSNIN-CTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMG--CSEI 265 (398)
Q Consensus 189 v~i~~~~Sd~~~~~~~~-~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~G--ad~I 265 (398)
+.+-+..++-..+...+ .+.+ ...+.++.+++.|+.+...++ +|. . -+.+.+.+.++.+.+++ ++.|
T Consensus 173 v~i~les~~e~~~~i~~~~~~~----~~l~~i~~a~~~Gi~v~~~~I--~Gl-~---et~ed~~~~l~~l~~l~~~~~~i 242 (369)
T 1r30_A 173 YNHNLDTSPEFYGNIITTRTYQ----ERLDTLEKVRDAGIKVCSGGI--VGL-G---ETVKDRAGLLLQLANLPTPPESV 242 (369)
T ss_dssp EECCCBSCHHHHHHHCCSSCHH----HHHHHHHHHHHHHCEEECCEE--ECS-S---CCHHHHHHHHHHHHSSSSCCSEE
T ss_pred EeecCcCCHHHHHHhCCCCCHH----HHHHHHHHHHHcCCeeeeeeE--eeC-C---CCHHHHHHHHHHHHhhcCCCCEE
Confidence 99876666544333222 2444 445566778888998765544 443 1 25788889999999988 7766
Q ss_pred EE------ccC----cCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCcc-chHHHHHHHHHHhCCCEEeeccccCCCCCCC
Q 015894 266 SL------GDT----IGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTY-GQALSNILASLQMGISTVDSSVSGLGGCPYA 334 (398)
Q Consensus 266 ~L------~DT----~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~-GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a 334 (398)
.+ ++| ....++.++.++++..+..+|.. .+|.-.-. .+.-.....++.+||+.+- . |+ .|.
T Consensus 243 ~~~~l~p~~gT~l~~~~~~~~~~~~~~~~~~r~~l~~~--~i~i~~~~~~l~~~~~~~~l~~Gan~~~---~--g~-~~~ 314 (369)
T 1r30_A 243 PINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTS--YVRLSAGREQMNEQTQAMCFMAGANSIF---Y--GC-KLL 314 (369)
T ss_dssp EEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCTTS--EEEEESSGGGSCHHHHHHHHHHTCCEEE---C--SS-BSS
T ss_pred EeeeeeecCCCcCCCCCCCCHHHHHHHHHHHHHhCCCC--ceEeecchhhcChHHHHHHhhCCCceEE---e--CC-eee
Confidence 54 333 12345688889999999888863 33322111 1223345668899999432 2 22 111
Q ss_pred CCCCCCccHHHHHHHHHhCCCCC
Q 015894 335 KGASGNVATEDVVYMLNGLGVRT 357 (398)
Q Consensus 335 ~graGNa~lE~vv~~L~~~Gi~t 357 (398)
.++|...++.+..+++.|..+
T Consensus 315 --t~~~~~~~~~~~~i~~~g~~~ 335 (369)
T 1r30_A 315 --TTPNPEEDKDLQLFRKLGLNP 335 (369)
T ss_dssp --SSBCCCHHHHHHHHHHTTCCS
T ss_pred --CCCCCCHHHHHHHHHHcCCCe
Confidence 346788999999999988754
No 28
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.57 E-value=0.002 Score=59.86 Aligned_cols=150 Identities=18% Similarity=0.171 Sum_probs=105.4
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHH-hccCCcEEEE-eCCHhhHHHHHHcCCCEEEEec
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ-NVEGARFPVL-TPNLKGFEAAVAAGAKEVAIFA 193 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~-~~~~~~l~~l-~~n~~~ie~a~~~Gv~~v~i~~ 193 (398)
.+.++-+++++.|.+.|++.||+++-. | +..+.++.++ +.|+..+.+= +.+.++++.++++|++.|---
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~t-~-------~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP- 92 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLRT-E-------AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSP- 92 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETTS-T-------THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEES-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC-c-------cHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeC-
Confidence 567888999999999999999998743 2 2445566666 5677554432 247899999999999987431
Q ss_pred cCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC------cEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE
Q 015894 194 SASESFSKSNINCTIEDSLIRYRDVALAARELSI------PVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL 267 (398)
Q Consensus 194 ~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~------~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L 267 (398)
..+ .+++++|+++|+ .+...+ .+++++.. +.++|+|.|.+
T Consensus 93 ~~~-------------------~evi~~~~~~~v~~~~~~~~~PG~-----------~TptE~~~----A~~~Gad~vK~ 138 (217)
T 3lab_A 93 GLT-------------------PELIEKAKQVKLDGQWQGVFLPGV-----------ATASEVMI----AAQAGITQLKC 138 (217)
T ss_dssp SCC-------------------HHHHHHHHHHHHHCSCCCEEEEEE-----------CSHHHHHH----HHHTTCCEEEE
T ss_pred CCc-------------------HHHHHHHHHcCCCccCCCeEeCCC-----------CCHHHHHH----HHHcCCCEEEE
Confidence 111 256788888888 654322 35665443 56899999865
Q ss_pred ccCcCcCCHHHH---HHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCC
Q 015894 268 GDTIGVGTPGTV---IPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGIS 319 (398)
Q Consensus 268 ~DT~G~~~P~~v---~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~ 319 (398)
.|.+. .++++.++.-+|++++-.=+ |....|+-..+.+|+.
T Consensus 139 -------FPa~~~gG~~~lkal~~p~p~i~~~ptG----GI~~~N~~~~l~aGa~ 182 (217)
T 3lab_A 139 -------FPASAIGGAKLLKAWSGPFPDIQFCPTG----GISKDNYKEYLGLPNV 182 (217)
T ss_dssp -------TTTTTTTHHHHHHHHHTTCTTCEEEEBS----SCCTTTHHHHHHSTTB
T ss_pred -------CccccccCHHHHHHHHhhhcCceEEEeC----CCCHHHHHHHHHCCCE
Confidence 45442 48899999888877776544 3345688888899974
No 29
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=97.46 E-value=0.0047 Score=62.89 Aligned_cols=209 Identities=12% Similarity=0.052 Sum_probs=125.2
Q ss_pred cEEEeCCCcccCCCCCC-CCCHHHHHHHHHHH-HhcCCCE--EEEecCCC-C-CcccCCCCHHHHHHHHHhccCCcEEEE
Q 015894 98 VKIVEVGPRDGLQNEKN-IVPAVVKVELIKLL-VSSGLAV--VEATSFVS-P-KWVPQLADAKDVMAAIQNVEGARFPVL 171 (398)
Q Consensus 98 I~i~D~TLRDG~Q~~~~-~~~~~~k~~ia~~L-~~aGv~~--IEvG~~~~-~-~~~p~~~D~~~v~~~i~~~~~~~l~~l 171 (398)
..|+.+|-....|.-|. .++.+....++..+ .++||+. |=++.... | .| |..++++-++.
T Consensus 47 PVIIe~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~~~vPv~pV~LhlDHg~~~~w--~~~~~~~am~~------------ 112 (450)
T 3txv_A 47 PVLIEATCNQVNQDGGYTGMTPEDFTRFVGAIADRIEFPREKILLGGDHLGPNPW--KHLPADEAMAK------------ 112 (450)
T ss_dssp CEEEEEETTTSCTTCTTTTCCHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSGGG--TTSCHHHHHHH------------
T ss_pred CEEEEcChhhHhhcCCCCCCCHHHHHHHHHHHHHHcCcCcccEEEECCCCCCccc--ccccHHHHHHH------------
Confidence 34555665544443221 35555555555544 5567774 44432211 1 12 11233332222
Q ss_pred eCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEE-EEeeeecCCCC--------
Q 015894 172 TPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRG-YLSCVVGCPVE-------- 242 (398)
Q Consensus 172 ~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~-~l~~~fg~~~~-------- 242 (398)
..+.+..++++|...|.+=.|..+. +.|...|.+-..++..+++++|.+.+..+.+ .+.++.|.++.
T Consensus 113 --a~e~i~~aI~AGFtSVMiD~S~~p~--eeNi~lt~evva~rtaeL~~~A~~~~~~~g~~e~~yviGtEvpvpGGa~~~ 188 (450)
T 3txv_A 113 --AEAMITAYAKAGFTKLHLDTSMGCA--GEPTALPDATTAARAARLAAVAEDAVGGRGGVLPVYIIGTEVPIPGGALEE 188 (450)
T ss_dssp --HHHHHHHHHTTTCCEEEECCCBCCS--SSCSBCCHHHHHHHHHHHHHHHHHTC------CCEEEEECC----------
T ss_pred --HHHHHHHHHHcCCCEEEECCCCCch--hhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeeeecCCCCccccc
Confidence 2346789999999999985554442 5678889999999999999999987554421 23444566441
Q ss_pred ----CCCCHHHHHHHHHH----HHhCCCC-----EEEEccCcCcCCH-----HHHHHHHHHHHhhCCCCe-EEEEeCCcc
Q 015894 243 ----GMVPPSKVAYVSKQ----LYDMGCS-----EISLGDTIGVGTP-----GTVIPMLEAVLDAVPVDK-LAVHFHDTY 303 (398)
Q Consensus 243 ----~r~~~~~l~~~a~~----l~~~Gad-----~I~L~DT~G~~~P-----~~v~~lv~~l~~~~p~~~-l~~H~Hnd~ 303 (398)
.-++|+...++++. +.+.|++ .+.|+=..|+..- .-=.+.++.|++.+++.| |.+|+|++.
T Consensus 189 ~~~~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~~~~L~~~v~~~P~LVlhghStD 268 (450)
T 3txv_A 189 LDTLEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRARAEKLSATLGQLHGMVFEAHSTD 268 (450)
T ss_dssp ---CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTTTSHHHHGGGTSTTCEEEESCCT
T ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHHHHHHHHHhccCCCEEEecCCCC
Confidence 25788887776654 4455663 3455555554431 100113444454444445 999999999
Q ss_pred chHHHHHHHHHHhCCCEEeec
Q 015894 304 GQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 304 GlA~ANalaAl~aGa~~VD~S 324 (398)
|..-.+...+++.|+..+++.
T Consensus 269 y~~~e~l~~~V~~GiaklNVg 289 (450)
T 3txv_A 269 YQTPDALRELVADGFAILKVG 289 (450)
T ss_dssp TCCHHHHHHHHHTTEEEEEEC
T ss_pred CCCHHHHHHHHHcCCcEEEEC
Confidence 999999999999999998873
No 30
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.44 E-value=0.00095 Score=63.38 Aligned_cols=174 Identities=13% Similarity=0.084 Sum_probs=108.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCc--cc--CC---------CCHHHHHHHHHhcc-CCcEEEEeC-CH---h
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKW--VP--QL---------ADAKDVMAAIQNVE-GARFPVLTP-NL---K 176 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~--~p--~~---------~D~~~v~~~i~~~~-~~~l~~l~~-n~---~ 176 (398)
.-+.+.-+++++.|.+.|.|.||+|.|.+.+. .| |- .+.+.+++.++++. .+.+..|+. |. .
T Consensus 24 ~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~ 103 (252)
T 3tha_A 24 YPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSY 103 (252)
T ss_dssp SSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHh
Confidence 35678889999999999999999999876321 12 10 12345666666543 345555553 52 2
Q ss_pred h----HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHH
Q 015894 177 G----FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAY 252 (398)
Q Consensus 177 ~----ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~ 252 (398)
| ++.+.++|++.+-+.+-. . +...+..+.++++|+.... ++ .| .++++.+..
T Consensus 104 G~e~F~~~~~~aGvdG~IipDLP------------~----eE~~~~~~~~~~~Gl~~I~-lv----aP---~t~~eRi~~ 159 (252)
T 3tha_A 104 GLEKFVKKAKSLGICALIVPELS------------F----EESDDLIKECERYNIALIT-LV----SV---TTPKERVKK 159 (252)
T ss_dssp CHHHHHHHHHHTTEEEEECTTCC------------G----GGCHHHHHHHHHTTCEECE-EE----ET---TSCHHHHHH
T ss_pred hHHHHHHHHHHcCCCEEEeCCCC------------H----HHHHHHHHHHHHcCCeEEE-Ee----CC---CCcHHHHHH
Confidence 4 356788999988875321 1 2235667889999998642 22 12 234555554
Q ss_pred HHHHHHhCCCCEEEEcc---CcCcCCH--HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEE
Q 015894 253 VSKQLYDMGCSEISLGD---TIGVGTP--GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTV 321 (398)
Q Consensus 253 ~a~~l~~~Gad~I~L~D---T~G~~~P--~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~V 321 (398)
++ +.+-.-||+.. +.|.-.+ ..+.++++.+|+.. +.|+.+ -+|.......+++..+||.|
T Consensus 160 ia----~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~v----GfGIst~e~a~~~~~~ADGV 224 (252)
T 3tha_A 160 LV----KHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFT-NLPIFV----GFGIQNNQDVKRMRKVADGV 224 (252)
T ss_dssp HH----TTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTC-CSCEEE----ESSCCSHHHHHHHTTTSSEE
T ss_pred HH----HhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhc-CCcEEE----EcCcCCHHHHHHHHhcCCEE
Confidence 44 34434455554 5566543 45889999999875 356666 45666666666666677644
No 31
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.44 E-value=0.0019 Score=60.58 Aligned_cols=151 Identities=23% Similarity=0.157 Sum_probs=104.6
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHH-hccCCcEEEE-eCCHhhHHHHHHcCCCEEEEec
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ-NVEGARFPVL-TPNLKGFEAAVAAGAKEVAIFA 193 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~-~~~~~~l~~l-~~n~~~ie~a~~~Gv~~v~i~~ 193 (398)
-+.++-++++++|.+.|++.||+++-. | +..+.++.++ +.++..+.+= +.+.++++.++++|++.|..-.
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~t-~-------~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~ 114 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFRS-D-------AAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPG 114 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTS-T-------THHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC-C-------CHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCC
Confidence 345677999999999999999998642 2 3445666666 4676544432 2468899999999999886311
Q ss_pred cCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCc
Q 015894 194 SASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGV 273 (398)
Q Consensus 194 ~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~ 273 (398)
.+ .++++++++.|+.+... -.+++++. ++.++|+|.|.+
T Consensus 115 --~~------------------~~vi~~~~~~gi~~ipG-----------v~TptEi~----~A~~~Gad~vK~------ 153 (232)
T 4e38_A 115 --FN------------------PNTVRACQEIGIDIVPG-----------VNNPSTVE----AALEMGLTTLKF------ 153 (232)
T ss_dssp --CC------------------HHHHHHHHHHTCEEECE-----------ECSHHHHH----HHHHTTCCEEEE------
T ss_pred --CC------------------HHHHHHHHHcCCCEEcC-----------CCCHHHHH----HHHHcCCCEEEE------
Confidence 11 35678888999987522 13566544 356799999876
Q ss_pred CCHHHH---HHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCE
Q 015894 274 GTPGTV---IPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGIST 320 (398)
Q Consensus 274 ~~P~~v---~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~ 320 (398)
.|.+. .++++.++..+|++++-. +=|....|+-..+++|+..
T Consensus 154 -FPa~~~gG~~~lkal~~p~p~ip~~p----tGGI~~~n~~~~l~aGa~~ 198 (232)
T 4e38_A 154 -FPAEASGGISMVKSLVGPYGDIRLMP----TGGITPSNIDNYLAIPQVL 198 (232)
T ss_dssp -CSTTTTTHHHHHHHHHTTCTTCEEEE----BSSCCTTTHHHHHTSTTBC
T ss_pred -CcCccccCHHHHHHHHHHhcCCCeee----EcCCCHHHHHHHHHCCCeE
Confidence 33221 378899998888777664 4455567889999999853
No 32
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=97.43 E-value=0.011 Score=53.16 Aligned_cols=155 Identities=17% Similarity=0.182 Sum_probs=102.5
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHh-cc-CCcEEE-EeCCHhhHHHHHHcCCCEEEEe
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQN-VE-GARFPV-LTPNLKGFEAAVAAGAKEVAIF 192 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~-~~-~~~l~~-l~~n~~~ie~a~~~Gv~~v~i~ 192 (398)
.+.++-.++++.+.+.|++.||+.+-. + +..+.++.+|+ .+ +..+.+ .+.+.++++.+.+.|+|.| +.
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~~-~-------~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~ 89 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFTV-P-------DADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-VS 89 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETTS-T-------THHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-EC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC-h-------hHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-Ec
Confidence 467778899999999999999997642 1 23445666664 34 444444 3467888999999999999 43
Q ss_pred ccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcC
Q 015894 193 ASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIG 272 (398)
Q Consensus 193 ~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G 272 (398)
... + .++++++++.|+.+.+.+ .++++ +..+.++|+|.|.+-..
T Consensus 90 ~~~-----------~--------~~~~~~~~~~g~~vi~g~-----------~t~~e----~~~a~~~Gad~vk~~~~-- 133 (205)
T 1wa3_A 90 PHL-----------D--------EEISQFCKEKGVFYMPGV-----------MTPTE----LVKAMKLGHTILKLFPG-- 133 (205)
T ss_dssp SSC-----------C--------HHHHHHHHHHTCEEECEE-----------CSHHH----HHHHHHTTCCEEEETTH--
T ss_pred CCC-----------C--------HHHHHHHHHcCCcEECCc-----------CCHHH----HHHHHHcCCCEEEEcCc--
Confidence 221 1 246678888999875311 23444 44567899998876321
Q ss_pred cCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEe
Q 015894 273 VGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVD 322 (398)
Q Consensus 273 ~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD 322 (398)
.+. -.++++.+++.+|++++..=+--+ ..|+...+++|++.|-
T Consensus 134 --~~~-g~~~~~~l~~~~~~~pvia~GGI~----~~~~~~~~~~Ga~~v~ 176 (205)
T 1wa3_A 134 --EVV-GPQFVKAMKGPFPNVKFVPTGGVN----LDNVCEWFKAGVLAVG 176 (205)
T ss_dssp --HHH-HHHHHHHHHTTCTTCEEEEBSSCC----TTTHHHHHHHTCSCEE
T ss_pred --ccc-CHHHHHHHHHhCCCCcEEEcCCCC----HHHHHHHHHCCCCEEE
Confidence 112 235677777777667776655443 2577888899998654
No 33
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=97.23 E-value=0.074 Score=51.02 Aligned_cols=203 Identities=14% Similarity=0.082 Sum_probs=116.0
Q ss_pred EEEeCCC---cccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCC-CCCcccC--CCCHHHHHHHHHhcc--CCcEEE
Q 015894 99 KIVEVGP---RDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFV-SPKWVPQ--LADAKDVMAAIQNVE--GARFPV 170 (398)
Q Consensus 99 ~i~D~TL---RDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~-~~~~~p~--~~D~~~v~~~i~~~~--~~~l~~ 170 (398)
-|+.+|+ =||++ .++.+..++.++.+.+.|.+.|++|.-. .|...|. -++.+.+...++.+. ++.++.
T Consensus 10 gilN~TpDSFsdgg~----~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSI 85 (280)
T 1eye_A 10 GVLNVTDDSFSDGGC----YLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSI 85 (280)
T ss_dssp EEEECSCCTTCSSCC----CCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEE
T ss_pred EEEeCCCCCcCCCcc----cCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEE
Confidence 3555555 45544 4688999999999999999999999632 2321111 112222333333332 666777
Q ss_pred EeCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-----C
Q 015894 171 LTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGM-----V 245 (398)
Q Consensus 171 l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r-----~ 245 (398)
=+.+.+-+++|+++|++.|.=..... . ..++.+.++++|..+. ++..-|.|..-. +
T Consensus 86 DT~~~~va~aAl~aGa~iINdvsg~~---------~--------d~~m~~~~a~~~~~vV--lmh~~G~p~tm~~~~~~y 146 (280)
T 1eye_A 86 DTMRADVARAALQNGAQMVNDVSGGR---------A--------DPAMGPLLAEADVPWV--LMHWRAVSADTPHVPVRY 146 (280)
T ss_dssp ECSCHHHHHHHHHTTCCEEEETTTTS---------S--------CTTHHHHHHHHTCCEE--EECCCCSCTTCTTSCCCC
T ss_pred eCCCHHHHHHHHHcCCCEEEECCCCC---------C--------CHHHHHHHHHhCCeEE--EEcCCCCCcchhhcCcch
Confidence 67888899999999998775322110 0 0134566778888775 454444443211 1
Q ss_pred -C-----HHHHHHHHHHHHhCCCC--EEEEccCcCcC-CHHHHHHHHHHHHhhC-CCCeEEEEeCC--------------
Q 015894 246 -P-----PSKVAYVSKQLYDMGCS--EISLGDTIGVG-TPGTVIPMLEAVLDAV-PVDKLAVHFHD-------------- 301 (398)
Q Consensus 246 -~-----~~~l~~~a~~l~~~Gad--~I~L~DT~G~~-~P~~v~~lv~~l~~~~-p~~~l~~H~Hn-------------- 301 (398)
+ .+++.+.++.+.++|++ .|.|==-+|.. +..+-.++++.+..-- ++.|+-+=.-|
T Consensus 147 ~dv~~~v~~~l~~~i~~a~~~Gi~~~~IilDPg~Gf~k~~~~n~~ll~~l~~~~~~g~Pvl~G~Srksfi~~~~~~~~g~ 226 (280)
T 1eye_A 147 GNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVLVGASRKRFLGALLAGPDGV 226 (280)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHTCCSSSC
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCChhhEEEECCCCcccCHHHHHHHHHHHHHhhcCCCCEEEEecchHHHHhhhccccCC
Confidence 1 56777788888999987 45443233332 3456666666665321 33343331111
Q ss_pred ------ccchHHHHHHHHHHhCCCEEeec
Q 015894 302 ------TYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 302 ------d~GlA~ANalaAl~aGa~~VD~S 324 (398)
..+.-.+-+..|+..|+++|.+.
T Consensus 227 ~~~~~~R~~~t~a~~~~a~~~Ga~Ivrvh 255 (280)
T 1eye_A 227 MRPTDGRDTATAVISALAALHGAWGVRVH 255 (280)
T ss_dssp CCCGGGGHHHHHHHHHHHHHTTCSEEEES
T ss_pred CCCcccchHHHHHHHHHHHHcCCCEEEeC
Confidence 12223555667788888877653
No 34
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=97.17 E-value=0.015 Score=57.06 Aligned_cols=191 Identities=16% Similarity=0.176 Sum_probs=128.0
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHH----hccCCcEEEEe---CCHhhHHHHHHcCCC
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ----NVEGARFPVLT---PNLKGFEAAVAAGAK 187 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~----~~~~~~l~~l~---~n~~~ie~a~~~Gv~ 187 (398)
....+....++++-.+.+-+.|=-.+...-++. ..+.+...++ ...++.+.... .+.+.+..++++|..
T Consensus 25 v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~----g~~~~~~~v~~aa~~~~~VPValHlDHg~~~e~i~~ai~~GFt 100 (323)
T 2isw_A 25 VNNMEQIQGIMKAVVQLKSPVILQCSRGALKYS----DMIYLKKLCEAALEKHPDIPICIHLDHGDTLESVKMAIDLGFS 100 (323)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHT----TTHHHHHHHHHHHHHCTTSCEEEEEEEECSHHHHHHHHHTTCS
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHHhC----CHHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHcCCC
Confidence 567888889999999999998765543221111 1122222222 21445554433 467889999999999
Q ss_pred EEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC-----CCCCHHHHHHHHHHHHhCCC
Q 015894 188 EVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE-----GMVPPSKVAYVSKQLYDMGC 262 (398)
Q Consensus 188 ~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~-----~r~~~~~l~~~a~~l~~~Ga 262 (398)
.|.+=.| ..+.+|+++.-++++++|++.|+.|++.|-..-|.++. ..++|+...++++ +.|+
T Consensus 101 SVMiDgS----------~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~---~Tgv 167 (323)
T 2isw_A 101 SVMIDAS----------HHPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVE---LTGV 167 (323)
T ss_dssp EEEECCT----------TSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------CCCCCHHHHHHHHH---HHCC
T ss_pred eEEecCC----------CCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccCCccCcccccccCCHHHHHHHHH---HHCC
Confidence 8876332 23678999999999999999999999888876544431 2488998888776 4699
Q ss_pred CEEEE--ccCcCcCC-HHHHH-----HHHHHHHhhCCCCeEEEEe-------------------CCccchHHHHHHHHHH
Q 015894 263 SEISL--GDTIGVGT-PGTVI-----PMLEAVLDAVPVDKLAVHF-------------------HDTYGQALSNILASLQ 315 (398)
Q Consensus 263 d~I~L--~DT~G~~~-P~~v~-----~lv~~l~~~~p~~~l~~H~-------------------Hnd~GlA~ANalaAl~ 315 (398)
|.+.+ .-+=|.-. |.... ++++.+++.++ +||.+|+ +++.|........|++
T Consensus 168 D~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~-vpLVlHGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e~i~~ai~ 246 (323)
T 2isw_A 168 DALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTG-IPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIG 246 (323)
T ss_dssp SEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHC-SCEEECSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHH
T ss_pred CEEEEecCccccccCCCCCcccccCHHHHHHHHHHhC-CCeEEECCCCCCHHHHHHHHHhccccccCCCCCHHHHHHHHH
Confidence 96544 34434332 22222 57777887774 6899999 4488999999999999
Q ss_pred hCCCEEee
Q 015894 316 MGISTVDS 323 (398)
Q Consensus 316 aGa~~VD~ 323 (398)
.|+.-|+.
T Consensus 247 ~GV~KiNi 254 (323)
T 2isw_A 247 EGVCKINV 254 (323)
T ss_dssp TTEEEEEE
T ss_pred CCCeEEEE
Confidence 99876643
No 35
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.09 E-value=0.035 Score=52.74 Aligned_cols=190 Identities=14% Similarity=0.064 Sum_probs=120.2
Q ss_pred EEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--C---
Q 015894 99 KIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--P--- 173 (398)
Q Consensus 99 ~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~--- 173 (398)
..+|-|+= +-.-+.++..++++...+.|+..+-+ +|.|+| ...+.++ -.++++.+.+ |
T Consensus 45 ~~IDhTlL------~p~~t~~~I~~lc~eA~~~~~aaVCV----~p~~V~------~a~~~L~-gs~v~v~tVigFP~G~ 107 (260)
T 3r12_A 45 SAIEHTNL------KPFATPDDIKKLCLEARENRFHGVCV----NPCYVK------LAREELE-GTDVKVVTVVGFPLGA 107 (260)
T ss_dssp HHEEEEEC------CTTCCHHHHHHHHHHHHHTTCSEEEE----CGGGHH------HHHHHHT-TSCCEEEEEESTTTCC
T ss_pred HhcCcccC------CCCCCHHHHHHHHHHHHhcCCcEEEE----CHHHHH------HHHHHhc-CCCCeEEEEecCCCCC
Confidence 35666661 22567888889999999999998887 344443 2223332 2346666544 2
Q ss_pred C-----HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHH
Q 015894 174 N-----LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPS 248 (398)
Q Consensus 174 n-----~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~ 248 (398)
+ ....+.|++.|+++|.+.+.+.... .-+.+...+.+..+++.+. |..+- +.... +..+.+
T Consensus 108 ~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk-----~g~~~~v~~eI~~v~~a~~--~~~lK--VIlEt-----~~Lt~e 173 (260)
T 3r12_A 108 NETRTKAHEAIFAVESGADEIDMVINVGMLK-----AKEWEYVYEDIRSVVESVK--GKVVK--VIIET-----CYLDTE 173 (260)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHTT--TSEEE--EECCG-----GGCCHH
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEEeehhhhc-----cccHHHHHHHHHHHHHhcC--CCcEE--EEEeC-----CCCCHH
Confidence 1 1356789999999999988754321 2256777888877777654 44443 22222 345788
Q ss_pred HHHHHHHHHHhCCCCEEEEcc--CcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 249 KVAYVSKQLYDMGCSEISLGD--TIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 249 ~l~~~a~~l~~~Gad~I~L~D--T~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
.+...++.+.++|+|.|--.- ..|..+++++.-+-+.+.. ++++-.==-.- -...+++-+++||++|-+|.
T Consensus 174 ei~~A~~ia~eaGADfVKTSTGf~~~GAT~edV~lm~~~vg~-----~v~VKaAGGIr-t~~~al~mi~aGA~RiGtS~ 246 (260)
T 3r12_A 174 EKIAACVISKLAGAHFVKTSTGFGTGGATAEDVHLMKWIVGD-----EMGVKASGGIR-TFEDAVKMIMYGADRIGTSS 246 (260)
T ss_dssp HHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHCT-----TSEEEEESSCC-SHHHHHHHHHTTCSEEEESC
T ss_pred HHHHHHHHHHHhCcCEEEcCCCCCCCCCCHHHHHHHHHHhCC-----CceEEEeCCCC-CHHHHHHHHHcCCceeecch
Confidence 899999999999999886662 1245677777766555432 23333211111 12667777999999987663
No 36
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=97.09 E-value=0.034 Score=51.39 Aligned_cols=173 Identities=17% Similarity=0.176 Sum_probs=102.0
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCC-Ccc----c-----------CCCCHHHHHHHHHhccCCcEEEEeC-C---
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSP-KWV----P-----------QLADAKDVMAAIQNVEGARFPVLTP-N--- 174 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~-~~~----p-----------~~~D~~~v~~~i~~~~~~~l~~l~~-n--- 174 (398)
.++.+.-.++++.+.+. ++.||++.|.+. ..- + .+....++++.+++..+..+..+.. |
T Consensus 15 ~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~ 93 (248)
T 1geq_A 15 DPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIY 93 (248)
T ss_dssp SSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHHH
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchhh
Confidence 34557888999999999 999999976542 210 0 0001123444455444555665653 4
Q ss_pred ----HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHH
Q 015894 175 ----LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKV 250 (398)
Q Consensus 175 ----~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l 250 (398)
.+.++.++++|++.|.+..-.. +...++++.++++|..+...++ | .++.+.+
T Consensus 94 ~~~~~~~~~~~~~~Gad~v~~~~~~~----------------~~~~~~~~~~~~~g~~~~~~i~-----~---~t~~e~~ 149 (248)
T 1geq_A 94 RAGVRNFLAEAKASGVDGILVVDLPV----------------FHAKEFTEIAREEGIKTVFLAA-----P---NTPDERL 149 (248)
T ss_dssp HHCHHHHHHHHHHHTCCEEEETTCCG----------------GGHHHHHHHHHHHTCEEEEEEC-----T---TCCHHHH
T ss_pred hcCHHHHHHHHHHCCCCEEEECCCCh----------------hhHHHHHHHHHHhCCCeEEEEC-----C---CCHHHHH
Confidence 3578899999999999853211 1234667888899987653222 1 1233333
Q ss_pred HHHHHHHHhCCCC-EEEEccCcCcC-----CHHHHHHHHHHHHhhCCCCeEEEEeCCccchHH-HHHHHHHHhCCCEEe
Q 015894 251 AYVSKQLYDMGCS-EISLGDTIGVG-----TPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQAL-SNILASLQMGISTVD 322 (398)
Q Consensus 251 ~~~a~~l~~~Gad-~I~L~DT~G~~-----~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~-ANalaAl~aGa~~VD 322 (398)
..+. +. ++ .|++....|.. .+....++++.+++... .+|.+ .-|... .|+...+.+||+.|-
T Consensus 150 ~~~~----~~-~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~-~pi~~----~GGI~~~e~i~~~~~~Gad~vi 218 (248)
T 1geq_A 150 KVID----DM-TTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICR-NKVAV----GFGVSKREHVVSLLKEGANGVV 218 (248)
T ss_dssp HHHH----HH-CSSEEEEECCC-------CCCHHHHHHHHHHHHHCS-SCEEE----ESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHH----hc-CCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhcC-CCEEE----EeecCCHHHHHHHHHcCCCEEE
Confidence 3332 22 45 66665554422 23455678888887653 34444 345555 677777789998664
No 37
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=97.08 E-value=0.069 Score=51.47 Aligned_cols=194 Identities=13% Similarity=0.096 Sum_probs=120.6
Q ss_pred cEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--C--
Q 015894 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--P-- 173 (398)
Q Consensus 98 I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~-- 173 (398)
..++|-|+ .+-.-+.++..++++...+.|+..+-+- |.|++ ...+.++. .++++...+ |
T Consensus 59 a~~IDhTl------L~p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~------~a~~~L~~-s~V~V~tVigFP~G 121 (288)
T 3oa3_A 59 AQIIDHTQ------LSLSATGSQIDVLCAEAKEYGFATVCVR----PDYVS------RAVQYLQG-TQVGVTCVIGFHEG 121 (288)
T ss_dssp GGGEEEEC------CCTTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHH------HHHHHTTT-SSCEEEEEESTTTS
T ss_pred HHhcCccc------CCCCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHH------HHHHHcCC-CCCeEEEEeCCCCC
Confidence 34667776 2235678888899999999999988873 43432 22223321 246666554 2
Q ss_pred -C-----HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCH
Q 015894 174 -N-----LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPP 247 (398)
Q Consensus 174 -n-----~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~ 247 (398)
+ ...++.|++.|+++|.+.+..... ..-+.+...+.+..+.+.|.+..++| ... .+..+.
T Consensus 122 ~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~l-----k~g~~~~v~~eI~~V~~a~~~~~lKV----IlE-----t~~Lt~ 187 (288)
T 3oa3_A 122 TYSTDQKVSEAKRAMQNGASELDMVMNYPWL-----SEKRYTDVFQDIRAVRLAAKDAILKV----ILE-----TSQLTA 187 (288)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHTTTSEEEE----ECC-----GGGCCH
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEEEeehhhh-----cCCcHHHHHHHHHHHHHHhcCCCceE----EEE-----CCCCCH
Confidence 1 235778999999999998765432 12356777888877777765432222 222 123567
Q ss_pred HHHHHHHHHHHhCCCCEEEEcc--CcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 248 SKVAYVSKQLYDMGCSEISLGD--TIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 248 ~~l~~~a~~l~~~Gad~I~L~D--T~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
+.+...++.+.++|+|.|--.- +.|..+++++.-+-+.+ +..+. ++.+-.=--.- -...+++.+++||++|-+|.
T Consensus 188 eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edv~lmr~~v-~~~g~-~v~VKAAGGIr-t~edAl~mi~aGA~RiGtS~ 264 (288)
T 3oa3_A 188 DEIIAGCVLSSLAGADYVKTSTGFNGPGASIENVSLMSAVC-DSLQS-ETRVKASGGIR-TIEDCVKMVRAGAERLGASA 264 (288)
T ss_dssp HHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHH-HHSSS-CCEEEEESSCC-SHHHHHHHHHTTCSEEEESC
T ss_pred HHHHHHHHHHHHcCCCEEEcCCCCCCCCCCHHHHHHHHHHH-HHhCC-CceEEEeCCCC-CHHHHHHHHHcCCceeehhh
Confidence 8888899999999999887662 23467788876554444 33221 23332211111 12778888999999876653
No 38
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=97.07 E-value=0.042 Score=53.15 Aligned_cols=205 Identities=13% Similarity=0.183 Sum_probs=109.7
Q ss_pred cEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCC-CCCccc--CCCCHHHHHHHHHhcc--CCcEEEEe
Q 015894 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFV-SPKWVP--QLADAKDVMAAIQNVE--GARFPVLT 172 (398)
Q Consensus 98 I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~-~~~~~p--~~~D~~~v~~~i~~~~--~~~l~~l~ 172 (398)
+-|+-+|. |-..--|..++.+..++.++.+.+.|.+.|++|.-. .|...+ .-++.+.+...++.+. ++.++.=+
T Consensus 32 MGIlNvTP-DSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSIDT 110 (294)
T 2dqw_A 32 LGVLNLTP-DSFSDGGRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSVDT 110 (294)
T ss_dssp EEEEECCC--------------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEEEC
T ss_pred EEEEeCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEC
Confidence 44666665 333322334567778889999999999999999733 232111 1112222333344333 56666666
Q ss_pred CCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeee-cCCCCC----CCC-
Q 015894 173 PNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVV-GCPVEG----MVP- 246 (398)
Q Consensus 173 ~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~f-g~~~~~----r~~- 246 (398)
.+.+-+++|+++|++.|. ++|-. ...++.+.++++|..+. ++..- |.|..- .++
T Consensus 111 ~~~~Va~aAl~aGa~iIN---dVsg~---------------~d~~m~~v~a~~~~~vV--lmh~~eG~p~tm~~~~~y~d 170 (294)
T 2dqw_A 111 RKPEVAEEALKLGAHLLN---DVTGL---------------RDERMVALAARHGVAAV--VMHMPVPDPATMMAHARYRD 170 (294)
T ss_dssp SCHHHHHHHHHHTCSEEE---CSSCS---------------CCHHHHHHHHHHTCEEE--EECCSSSCTTTGGGGCCCSS
T ss_pred CCHHHHHHHHHhCCCEEE---ECCCC---------------CChHHHHHHHHhCCCEE--EEcCCCCCCccccccCcccc
Confidence 788889999999999664 22210 01244567778888764 44432 333210 111
Q ss_pred -----HHHHHHHHHHHHhCCCCEEEEccCcCcCC-HHHHHHHHHHHHhhC-CCCeEEEEeC---------------Cccc
Q 015894 247 -----PSKVAYVSKQLYDMGCSEISLGDTIGVGT-PGTVIPMLEAVLDAV-PVDKLAVHFH---------------DTYG 304 (398)
Q Consensus 247 -----~~~l~~~a~~l~~~Gad~I~L~DT~G~~~-P~~v~~lv~~l~~~~-p~~~l~~H~H---------------nd~G 304 (398)
.+++.+.++.+.++|++.|.|==-+|... ..+-.++++.+++.. ++.|+-+=.- +-..
T Consensus 171 v~~ev~~~l~~~i~~a~~~Gi~~IilDPG~Gf~kt~~~n~~ll~~l~~~~~~g~Pvl~G~Srksfig~l~g~p~~~~R~~ 250 (294)
T 2dqw_A 171 VVAEVKAFLEAQARRALSAGVPQVVLDPGFGFGKLLEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGVEDPAQRVH 250 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSCEEEECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHHTCCSGGGCHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCcEEEcCCCCcccCHHHHHHHHHHHHHHhcCCCCEEEEeccchhhhhhcCCCchhhhHH
Confidence 34677778888899998655533334444 566777777775431 3334333111 1122
Q ss_pred hHHHHHHHHHHhCCCEEee
Q 015894 305 QALSNILASLQMGISTVDS 323 (398)
Q Consensus 305 lA~ANalaAl~aGa~~VD~ 323 (398)
...+-+..|+..|+++|.+
T Consensus 251 ~t~a~~~~a~~~Ga~IvRv 269 (294)
T 2dqw_A 251 GSVAAHLFAVMKGVRLLRV 269 (294)
T ss_dssp HHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHcCCcEEEc
Confidence 2336666777888877754
No 39
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=96.94 E-value=0.018 Score=54.57 Aligned_cols=177 Identities=17% Similarity=0.135 Sum_probs=112.5
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE----E----eC--C---HhhHHHHHH
Q 015894 117 PAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV----L----TP--N---LKGFEAAVA 183 (398)
Q Consensus 117 ~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~----l----~~--n---~~~ie~a~~ 183 (398)
+.++..++++...+.|++.+-+.. .|+ +... ..++.+.+ . .+ + ...++.|++
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~~----~~v----------~~~~-~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~ 103 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQR----GIA----------EKYY-DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVS 103 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEECH----HHH----------HHHC-CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHH
T ss_pred chhhHHHHHHHHHhhCCCEEEECH----HHH----------HHhh-cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHH
Confidence 566778899999999999998752 111 1111 22222111 1 11 1 146889999
Q ss_pred cCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCC
Q 015894 184 AGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCS 263 (398)
Q Consensus 184 ~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad 263 (398)
.|++.|.+..... ..+..+.++.+.++++.++++|+.+... ++.-|.......+++.+...++.+.++|+|
T Consensus 104 ~Ga~~v~~~~nig--------~~~~~~~~~~~~~v~~~~~~~~~~vIi~-~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD 174 (263)
T 1w8s_A 104 LGASAVGYTIYPG--------SGFEWKMFEELARIKRDAVKFDLPLVVE-SFPRGGKVVNETAPEIVAYAARIALELGAD 174 (263)
T ss_dssp TTCSEEEEEECTT--------STTHHHHHHHHHHHHHHHHHHTCCEEEE-ECCCSTTCCCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCCEEEEEEecC--------CcCHHHHHHHHHHHHHHHHHcCCeEEEE-eeCCCCccccCCCHHHHHHHHHHHHHcCCC
Confidence 9999987765222 1245678899999999999999987532 222111111112678888888999999999
Q ss_pred EEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCC--ccchHHHHHHHHHHhCCCEEee
Q 015894 264 EISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHD--TYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 264 ~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hn--d~GlA~ANalaAl~aGa~~VD~ 323 (398)
.|-.. +.| .|+.++.+.+.. ...|. +..=+=. |...+++|.-.++++||+.+-+
T Consensus 175 ~vkt~-~~~--~~e~~~~~~~~~-~~~pV--~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsv 230 (263)
T 1w8s_A 175 AMKIK-YTG--DPKTFSWAVKVA-GKVPV--LMSGGPKTKTEEDFLKQVEGVLEAGALGIAV 230 (263)
T ss_dssp EEEEE-CCS--SHHHHHHHHHHT-TTSCE--EEECCSCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEc-CCC--CHHHHHHHHHhC-CCCeE--EEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 98888 432 566666655443 22242 2222333 7889999999999999985443
No 40
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=96.92 E-value=0.028 Score=54.60 Aligned_cols=190 Identities=18% Similarity=0.203 Sum_probs=131.9
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHH---hccCCcEEEEe---CCHhhHHHHHHcCCCE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ---NVEGARFPVLT---PNLKGFEAAVAAGAKE 188 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~---~~~~~~l~~l~---~n~~~ie~a~~~Gv~~ 188 (398)
....+....++++-.+.+-+.|=-.+...-++. ..+.+...++ + .++.+.... .+.+.+..|+++|...
T Consensus 24 v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~----g~~~~~~~v~~~a~-~~VPValHlDHg~~~e~~~~ai~~GFtS 98 (305)
T 1rvg_A 24 VNNMEFLQAVLEAAEEQRSPVILALSEGAMKYG----GRALTLMAVELAKE-ARVPVAVHLDHGSSYESVLRALRAGFTS 98 (305)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHH----HHHHHHHHHHHHHH-CSSCEEEEEEEECSHHHHHHHHHTTCSE
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhC----CHHHHHHHHHHHHh-CCCcEEEECCCCCCHHHHHHHHHcCCCe
Confidence 567888889999999999998766543221111 1122222222 3 444444433 4678899999999998
Q ss_pred EEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC--------CCCCHHHHHHHHHHHHhC
Q 015894 189 VAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE--------GMVPPSKVAYVSKQLYDM 260 (398)
Q Consensus 189 v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~--------~r~~~~~l~~~a~~l~~~ 260 (398)
|.+=.| ..+.+|+++.-++++++|++.|+.|++.|-..-|.++. -.++|+...+++++ .
T Consensus 99 VMiDgS----------~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~---T 165 (305)
T 1rvg_A 99 VMIDKS----------HEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMER---T 165 (305)
T ss_dssp EEECCT----------TSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHH---H
T ss_pred eeeCCC----------CCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHH---H
Confidence 877332 23678999999999999999999999888876554542 13889988887764 5
Q ss_pred CCCEEEE--ccCcCcCC----HHHHHHHHHHHHhhCCCCeEEEEeCC-------------------ccchHHHHHHHHHH
Q 015894 261 GCSEISL--GDTIGVGT----PGTVIPMLEAVLDAVPVDKLAVHFHD-------------------TYGQALSNILASLQ 315 (398)
Q Consensus 261 Gad~I~L--~DT~G~~~----P~~v~~lv~~l~~~~p~~~l~~H~Hn-------------------d~GlA~ANalaAl~ 315 (398)
|+|.+.+ .-+=|.-. |.==.++++.+++.+| +||.+|+=. +.|........|++
T Consensus 166 gvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~-vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~ 244 (305)
T 1rvg_A 166 GADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVP-APLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAIS 244 (305)
T ss_dssp CCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCC-SCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHHHHHH
T ss_pred CCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcC-CCEEEeCCCCCcHHHHHHHHhhccccccCCCCCHHHHHHHHH
Confidence 9996443 34444433 3223467888888888 689999866 56888888999999
Q ss_pred hCCCEEee
Q 015894 316 MGISTVDS 323 (398)
Q Consensus 316 aGa~~VD~ 323 (398)
.|+.-|+.
T Consensus 245 ~GV~KiNi 252 (305)
T 1rvg_A 245 LGIAKINT 252 (305)
T ss_dssp TTEEEEEE
T ss_pred CCCeEEEE
Confidence 99876543
No 41
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=96.91 E-value=0.019 Score=52.96 Aligned_cols=171 Identities=15% Similarity=0.144 Sum_probs=103.2
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEE--EEeCCH-hhHHHHHHcCCCEEEEeccCc
Q 015894 120 VKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFP--VLTPNL-KGFEAAVAAGAKEVAIFASAS 196 (398)
Q Consensus 120 ~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~--~l~~n~-~~ie~a~~~Gv~~v~i~~~~S 196 (398)
.-.+.++.+.+.|++.|++...- ..++|.+....+..+.+++..+..+. .++.+. +-++.+.++|+|.|.+....+
T Consensus 20 ~l~~~i~~~~~~Gad~i~l~i~D-g~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~agad~v~vH~~~~ 98 (228)
T 1h1y_A 20 NLAAEADRMVRLGADWLHMDIMD-GHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVS 98 (228)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEB-SSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGGGC
T ss_pred HHHHHHHHHHHcCCCEEEEEEec-CCcCcchhhCHHHHHHHHhhcCCcEEEEEEecCHHHHHHHHHHcCCCEEEECCCCc
Confidence 34567788899999999887321 11122222223455666654443443 344443 358899999999998876544
Q ss_pred hHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhC--CCCEEEEc----cC
Q 015894 197 ESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM--GCSEISLG----DT 270 (398)
Q Consensus 197 d~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~--Gad~I~L~----DT 270 (398)
+. . +.+.++.+++.|+.+...+. |. ++.+.+ +.+.+. ++|.|.+. -+
T Consensus 99 ~~------------~---~~~~~~~i~~~g~~igv~~~-----p~---t~~e~~----~~~~~~~~~~d~vl~~sv~pg~ 151 (228)
T 1h1y_A 99 RD------------N---WQELIQSIKAKGMRPGVSLR-----PG---TPVEEV----FPLVEAENPVELVLVMTVEPGF 151 (228)
T ss_dssp TT------------T---HHHHHHHHHHTTCEEEEEEC-----TT---SCGGGG----HHHHHSSSCCSEEEEESSCTTC
T ss_pred cc------------H---HHHHHHHHHHcCCCEEEEEe-----CC---CCHHHH----HHHHhcCCCCCEEEEEeecCCC
Confidence 31 0 13556777888987763221 21 233332 333455 89988772 12
Q ss_pred cCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEe
Q 015894 271 IGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVD 322 (398)
Q Consensus 271 ~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD 322 (398)
.|.-.+....+.++.+++..+..++.+ +-|....|+-.++++||+.|=
T Consensus 152 ~g~~~~~~~l~~i~~~~~~~~~~pi~v----~GGI~~~ni~~~~~aGaD~vv 199 (228)
T 1h1y_A 152 GGQKFMPEMMEKVRALRKKYPSLDIEV----DGGLGPSTIDVAASAGANCIV 199 (228)
T ss_dssp SSCCCCGGGHHHHHHHHHHCTTSEEEE----ESSCSTTTHHHHHHHTCCEEE
T ss_pred CcccCCHHHHHHHHHHHHhcCCCCEEE----ECCcCHHHHHHHHHcCCCEEE
Confidence 244445666777888888775556665 456666788888889998653
No 42
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=96.85 E-value=0.044 Score=52.89 Aligned_cols=197 Identities=17% Similarity=0.166 Sum_probs=130.5
Q ss_pred cCCCCC--CCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHH---h--ccCCcEEEEe---CCHhh
Q 015894 108 GLQNEK--NIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ---N--VEGARFPVLT---PNLKG 177 (398)
Q Consensus 108 G~Q~~~--~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~---~--~~~~~l~~l~---~n~~~ 177 (398)
+.+..+ +....+....++++-.+.+-+.|=-.++..-++ +...+.+...++ + -.++.+.... .+.+.
T Consensus 19 ~~yAV~AfNv~n~e~~~avi~AAee~~sPvIlq~s~~~~~~---~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~~e~ 95 (288)
T 3q94_A 19 GKYAVGQFNMNNLEWTQAILAAAEEEKSPVILGVSEGAARH---MTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEK 95 (288)
T ss_dssp HTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHH---TSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSHHH
T ss_pred CCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhhhhh---cCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCCHHH
Confidence 444443 357888888999999999999776544321111 012222323333 2 2234444432 46788
Q ss_pred HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC------CCCCHHHHH
Q 015894 178 FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE------GMVPPSKVA 251 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~------~r~~~~~l~ 251 (398)
+..|+++|...|.+=.| . .+.+|+++.-++++++|++.|+.|++.|-..-|.++. ..++|+...
T Consensus 96 i~~ai~~GFtSVMiDgS--~--------~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~ 165 (288)
T 3q94_A 96 CKEAIDAGFTSVMIDAS--H--------HPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECK 165 (288)
T ss_dssp HHHHHHHTCSEEEECCT--T--------SCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHH
T ss_pred HHHHHHcCCCeEEEeCC--C--------CCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHH
Confidence 99999999998887333 1 3578999999999999999999999888876555543 258898877
Q ss_pred HHHHHHHhCCCCEEEEc--cCcCcC--CHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 252 YVSKQLYDMGCSEISLG--DTIGVG--TPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 252 ~~a~~l~~~Gad~I~L~--DT~G~~--~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
++++ +.|+|.+.++ -.=|.- .|.==.++++.+++..| +||.+|+=. |..-.....|++.|+.-|+.
T Consensus 166 ~Fv~---~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~-vpLVlHGgS--G~~~e~i~~ai~~Gv~KiNi 235 (288)
T 3q94_A 166 HLVE---ATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTG-VPLVLHGGT--GIPTADIEKAISLGTSKINV 235 (288)
T ss_dssp HHHH---HHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHC-SCEEECCCT--TCCHHHHHHHHHTTEEEEEE
T ss_pred HHHH---HHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcC-CCEEEeCCC--CCCHHHHHHHHHcCCeEEEE
Confidence 7765 5688865443 222321 13222345666777666 688888754 78888999999999876644
No 43
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=96.83 E-value=0.16 Score=48.09 Aligned_cols=226 Identities=11% Similarity=0.045 Sum_probs=138.0
Q ss_pred CCCCccEEEeCCCcccCCCCC---CCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHh----ccC
Q 015894 93 RVPGFVKIVEVGPRDGLQNEK---NIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQN----VEG 165 (398)
Q Consensus 93 ~~p~~I~i~D~TLRDG~Q~~~---~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~----~~~ 165 (398)
.|.+.|+|-++++-+|.-.-- ..-+.++.++-++.+...|.|.||+-...-. ...|.+++...+.. +.+
T Consensus 3 ~m~~~v~v~~~~ig~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~----~~~~~~~v~~~l~~lr~~~~~ 78 (258)
T 4h3d_A 3 AMKRKVQVKNITIGEGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFE----NVENIKEVKEVLYELRSYIHD 78 (258)
T ss_dssp -CCCCEEETTEEETSSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCT----TTTCHHHHHHHHHHHHHHCTT
T ss_pred CCcceEEEcCEEeCCCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeecccc----ccCCHHHHHHHHHHHHHhcCC
Confidence 478889999999987743211 1235677777788888999999999753211 12345555544432 234
Q ss_pred CcEEEEeCCH-hh-------------HHHHHHcC-CCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 015894 166 ARFPVLTPNL-KG-------------FEAAVAAG-AKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVR 230 (398)
Q Consensus 166 ~~l~~l~~n~-~~-------------ie~a~~~G-v~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~ 230 (398)
..+..-+|.. +| ++.+.+.| ++.|.+-....+ +...++++.+++.|..+-
T Consensus 79 lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~---------------~~~~~l~~~a~~~~~kiI 143 (258)
T 4h3d_A 79 IPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGD---------------EVIDEVVNFAHKKEVKVI 143 (258)
T ss_dssp SCEEEECCCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGGCH---------------HHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEEechhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhccH---------------HHHHHHHHHHHhCCCEEE
Confidence 4444444532 11 34556666 899999765433 223466788888888775
Q ss_pred EEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHh---hCCCCeEEEEeCCccchHH
Q 015894 231 GYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLD---AVPVDKLAVHFHDTYGQAL 307 (398)
Q Consensus 231 ~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~---~~p~~~l~~H~Hnd~GlA~ 307 (398)
+..=. | ....+.+.+.....++.+.|+|.+-|+=|. -++.++.+++....+ ..++.|+-.-.=-.. +.
T Consensus 144 ~S~Hd-f----~~TP~~~el~~~~~~~~~~gaDIvKia~~~--~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~MG~~--G~ 214 (258)
T 4h3d_A 144 ISNHD-F----NKTPKKEEIVSRLCRMQELGADLPKIAVMP--QNEKDVLVLLEATNEMFKIYADRPIITMSMSGM--GV 214 (258)
T ss_dssp EEEEE-S----SCCCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHTCSSCBEEEECTGG--GG
T ss_pred EEEec-C----CCCCCHHHHHHHHHHHHHhCCCEEEEEEcc--CCHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCC--Ch
Confidence 32211 1 222345788888999999999998887653 367788777766543 345555543322222 23
Q ss_pred HHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhC
Q 015894 308 SNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGL 353 (398)
Q Consensus 308 ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~ 353 (398)
-.=+.+-..|-....+++. + +- ..|+.+++++-..|+-+
T Consensus 215 ~SRi~~~~fGS~lTf~~~~---~-~s---APGQl~~~el~~~l~lL 253 (258)
T 4h3d_A 215 ISRLCGEIFGSALTFGAAK---S-VS---APGQISFKELNSVLNLL 253 (258)
T ss_dssp GGGTCHHHHCBCEEECBCC----------CTTCCBHHHHHHHHHHH
T ss_pred HHHHHHHHhCCceEeccCC---C-CC---CCCCCCHHHHHHHHHHH
Confidence 3344555668777777753 2 33 45699999998877643
No 44
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=96.83 E-value=0.0079 Score=55.89 Aligned_cols=170 Identities=21% Similarity=0.217 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE--EeCCH-hhHHHHHHcCCCEEEEecc-
Q 015894 119 VVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV--LTPNL-KGFEAAVAAGAKEVAIFAS- 194 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~--l~~n~-~~ie~a~~~Gv~~v~i~~~- 194 (398)
..-.+.++.+.+.|++.+++.... ..++|.+....++.+.+++..+..+.+ ++.|. +-++.+.++|+|.|.+..-
T Consensus 17 ~~l~~~i~~~~~~Gad~ihldi~D-G~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e~ 95 (230)
T 1tqj_A 17 SRLGEEIKAVDEAGADWIHVDVMD-GRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEH 95 (230)
T ss_dssp GGHHHHHHHHHHTTCSEEEEEEEB-SSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEEECST
T ss_pred hHHHHHHHHHHHcCCCEEEEEEEe-cCCCcchhhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEECccc
Confidence 344567888899999999987532 223344443346677777655555543 34443 3578999999999988754
Q ss_pred -CchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccC---
Q 015894 195 -ASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDT--- 270 (398)
Q Consensus 195 -~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT--- 270 (398)
..+ ...+.++.+++.|..+.+.+. |. ++.+.+..+. .++|.|.+.=.
T Consensus 96 ~~~~----------------~~~~~~~~i~~~g~~~gv~~~-----p~---t~~e~~~~~~-----~~~D~v~~msv~pg 146 (230)
T 1tqj_A 96 NASP----------------HLHRTLCQIRELGKKAGAVLN-----PS---TPLDFLEYVL-----PVCDLILIMSVNPG 146 (230)
T ss_dssp TTCT----------------THHHHHHHHHHTTCEEEEEEC-----TT---CCGGGGTTTG-----GGCSEEEEESSCC-
T ss_pred ccch----------------hHHHHHHHHHHcCCcEEEEEe-----CC---CcHHHHHHHH-----hcCCEEEEEEeccc
Confidence 332 123567788899998764332 21 2233322222 37887744322
Q ss_pred -cCcCCHHHHHHHHHHHHhhCC----CCeEEEEeCCccchHHHHHHHHHHhCCCEEe
Q 015894 271 -IGVGTPGTVIPMLEAVLDAVP----VDKLAVHFHDTYGQALSNILASLQMGISTVD 322 (398)
Q Consensus 271 -~G~~~P~~v~~lv~~l~~~~p----~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD 322 (398)
.|.-.+....+.++.+++..+ +.+|.+ +.|....|+-...++||+.+=
T Consensus 147 ~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v----~GGI~~~~~~~~~~aGad~vv 199 (230)
T 1tqj_A 147 FGGQSFIPEVLPKIRALRQMCDERGLDPWIEV----DGGLKPNNTWQVLEAGANAIV 199 (230)
T ss_dssp ---CCCCGGGHHHHHHHHHHHHHHTCCCEEEE----ESSCCTTTTHHHHHHTCCEEE
T ss_pred cCCccCcHHHHHHHHHHHHHHHhcCCCCcEEE----ECCcCHHHHHHHHHcCCCEEE
Confidence 233334456666777776552 456766 667777888888999998653
No 45
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=96.82 E-value=0.18 Score=48.30 Aligned_cols=169 Identities=16% Similarity=0.192 Sum_probs=100.5
Q ss_pred cEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCC-CCCcccCCCCHHHH---HHHHHhc---cCCcEEE
Q 015894 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFV-SPKWVPQLADAKDV---MAAIQNV---EGARFPV 170 (398)
Q Consensus 98 I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~-~~~~~p~~~D~~~v---~~~i~~~---~~~~l~~ 170 (398)
+-|+.+|. |-.+--|...+.+..++.++.+.+.|.+.|++|.-. .|...|.. ..+|+ ...++.+ .++.++.
T Consensus 18 mGilN~Tp-dSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~-~~eE~~rv~pvi~~l~~~~~~piSI 95 (282)
T 1aj0_A 18 MGILNVTP-DSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVS-VEEELQRVIPVVEAIAQRFEVWISV 95 (282)
T ss_dssp EEEEECCT-TTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCC-HHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred EEEEeCCC-CccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCC-HHHHHHHHHHHHHHHHhhcCCeEEE
Confidence 44566666 333222334678888999999999999999999733 35432221 12233 2233322 2666666
Q ss_pred EeCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCC--C--CC
Q 015894 171 LTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEG--M--VP 246 (398)
Q Consensus 171 l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~--r--~~ 246 (398)
=+.+.+-+++|+++|++.|.=..... ..++++.++++|..+. ++..-|.|..- + ++
T Consensus 96 DT~~~~va~aAl~aGa~iINdvsg~~------------------d~~~~~~~a~~~~~vV--lmh~~G~p~tm~~~~~y~ 155 (282)
T 1aj0_A 96 DTSKPEVIRESAKVGAHIINDIRSLS------------------EPGALEAAAETGLPVC--LMHMQGNPKTMQEAPKYD 155 (282)
T ss_dssp ECCCHHHHHHHHHTTCCEEEETTTTC------------------STTHHHHHHHHTCCEE--EECCSSCTTCCSCCCCCS
T ss_pred eCCCHHHHHHHHHcCCCEEEECCCCC------------------CHHHHHHHHHhCCeEE--EEccCCCCccccccCccc
Confidence 67788899999999999876322111 1244566778888775 44433333211 1 11
Q ss_pred ------HHHHHHHHHHHHhCCCC--EEEEccCcCcC-CHHHHHHHHHHHHh
Q 015894 247 ------PSKVAYVSKQLYDMGCS--EISLGDTIGVG-TPGTVIPMLEAVLD 288 (398)
Q Consensus 247 ------~~~l~~~a~~l~~~Gad--~I~L~DT~G~~-~P~~v~~lv~~l~~ 288 (398)
.+++.+.++.+.++|++ .|.|==-+|.. ++.+-.++++.+..
T Consensus 156 d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf~k~~~~n~~ll~~l~~ 206 (282)
T 1aj0_A 156 DVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAE 206 (282)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGG
T ss_pred hHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCcccCHHHHHHHHHHHHH
Confidence 56777888888999987 45543222322 34555666666653
No 46
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=96.80 E-value=0.32 Score=45.43 Aligned_cols=185 Identities=11% Similarity=0.100 Sum_probs=119.2
Q ss_pred EEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--CC--
Q 015894 99 KIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--PN-- 174 (398)
Q Consensus 99 ~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~n-- 174 (398)
..+|-|+ .+-.-+.++..++++...+.|+..+-+. |.|+ ...+.++..+++++.+.+ |.
T Consensus 22 ~~iDht~------L~p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-------~a~~~l~~~~~v~v~tvigFP~G~ 84 (234)
T 1n7k_A 22 SRIDSTL------LSPRATEEDVRNLVREASDYGFRCAVLT----PVYT-------VKISGLAEKLGVKLCSVIGFPLGQ 84 (234)
T ss_dssp TTEEEEC------CCTTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-------HHHHHHHHHHTCCEEEEESTTTCC
T ss_pred HHhceec------cCCCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-------eeehHhCCCCCceEEEEeCCCCCC
Confidence 3456666 1224578899999999999999998874 2211 112222222256776655 31
Q ss_pred ------HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHH
Q 015894 175 ------LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPS 248 (398)
Q Consensus 175 ------~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~ 248 (398)
...++.|++.|++.|.+.+..... .++.++.+..+++.|.+.|..+-+-+. . ...+++
T Consensus 85 ~~~~~k~~e~~~Av~~GAdEID~vinig~~---------~~~v~~ei~~v~~a~~~~g~~lKvIlE--t-----~~L~~e 148 (234)
T 1n7k_A 85 APLEVKLVEAQTVLEAGATELDVVPHLSLG---------PEAVYREVSGIVKLAKSYGAVVKVILE--A-----PLWDDK 148 (234)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEECCCGGGC---------HHHHHHHHHHHHHHHHHTTCEEEEECC--G-----GGSCHH
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEeccchHH---------HHHHHHHHHHHHHHHhhcCCeEEEEEe--c-----cCCCHH
Confidence 136789999999999998765432 227788888999999988887643232 2 123578
Q ss_pred HHHHHHHHHHhCCCCEEEEccCc---CcCCHHHHHHHHHHHHhhCCCCeEEEEe--CCccchHHHHHHHHHHhCCCEEee
Q 015894 249 KVAYVSKQLYDMGCSEISLGDTI---GVGTPGTVIPMLEAVLDAVPVDKLAVHF--HDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 249 ~l~~~a~~l~~~Gad~I~L~DT~---G~~~P~~v~~lv~~l~~~~p~~~l~~H~--Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
.+...++.+.++|+|.|--.-.. |..+++++.- +++++... ++|-.=+ + + ...+++-+++|+++|-+
T Consensus 149 ~i~~a~ria~eaGADfVKTsTG~~~~~gAt~~dv~l--~~m~~~v~-v~VKaaGGir-t----~~~al~~i~aGa~RiG~ 220 (234)
T 1n7k_A 149 TLSLLVDSSRRAGADIVKTSTGVYTKGGDPVTVFRL--ASLAKPLG-MGVKASGGIR-S----GIDAVLAVGAGADIIGT 220 (234)
T ss_dssp HHHHHHHHHHHTTCSEEESCCSSSCCCCSHHHHHHH--HHHHGGGT-CEEEEESSCC-S----HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCCCCCCCCCCHHHHHH--HHHHHHHC-CCEEEecCCC-C----HHHHHHHHHcCccccch
Confidence 89999999999999988765321 4456666554 11344333 3333322 2 2 36677777999998866
Q ss_pred c
Q 015894 324 S 324 (398)
Q Consensus 324 S 324 (398)
|
T Consensus 221 S 221 (234)
T 1n7k_A 221 S 221 (234)
T ss_dssp T
T ss_pred H
Confidence 5
No 47
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=96.77 E-value=0.01 Score=55.25 Aligned_cols=166 Identities=13% Similarity=0.119 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHhcCCCEEEE----ecCCCCCcccCCCCHHHHHHHHHhc--cCCcEEE--EeCCH-hhHHHHHHcCCCEE
Q 015894 119 VVKVELIKLLVSSGLAVVEA----TSFVSPKWVPQLADAKDVMAAIQNV--EGARFPV--LTPNL-KGFEAAVAAGAKEV 189 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEv----G~~~~~~~~p~~~D~~~v~~~i~~~--~~~~l~~--l~~n~-~~ie~a~~~Gv~~v 189 (398)
..-.+-++.+.++|.+.+-+ |.|+ |.+.--..+.+.+|+. ++..+-+ ++.+. +-++.+.++|+|.|
T Consensus 17 ~~l~~~i~~l~~~g~d~~h~DVmDg~Fv-----pn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~i 91 (228)
T 3ovp_A 17 ANLGAECLRMLDSGADYLHLDVMDGHFV-----PNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQY 91 (228)
T ss_dssp GGHHHHHHHHHHTTCSCEEEEEEBSSSS-----SCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSEE
T ss_pred hhHHHHHHHHHHcCCCEEEEEecCCCcC-----cccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCEE
Confidence 33456677888999995555 4554 3333233566777754 5655544 34444 34788899999999
Q ss_pred EEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE--
Q 015894 190 AIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL-- 267 (398)
Q Consensus 190 ~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L-- 267 (398)
.+..-.. +.+.+.++.+|++|..+.+.+. |. ++.+.+.++. + .+|.|.+
T Consensus 92 tvH~Ea~----------------~~~~~~i~~i~~~G~k~gval~-----p~---t~~e~l~~~l----~-~~D~Vl~ms 142 (228)
T 3ovp_A 92 TFHLEAT----------------ENPGALIKDIRENGMKVGLAIK-----PG---TSVEYLAPWA----N-QIDMALVMT 142 (228)
T ss_dssp EEEGGGC----------------SCHHHHHHHHHHTTCEEEEEEC-----TT---SCGGGTGGGG----G-GCSEEEEES
T ss_pred EEccCCc----------------hhHHHHHHHHHHcCCCEEEEEc-----CC---CCHHHHHHHh----c-cCCeEEEee
Confidence 9864322 2234667888999998765443 21 3344443333 1 3676643
Q ss_pred --ccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEe
Q 015894 268 --GDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVD 322 (398)
Q Consensus 268 --~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD 322 (398)
+...|.-.-.+..+.++.+|+..++.+|.+ |-|.-..|+-.++++||+.+=
T Consensus 143 v~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~V----dGGI~~~t~~~~~~aGAd~~V 195 (228)
T 3ovp_A 143 VEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEV----DGGVGPDTVHKCAEAGANMIV 195 (228)
T ss_dssp SCTTTCSCCCCGGGHHHHHHHHHHCTTCEEEE----ESSCSTTTHHHHHHHTCCEEE
T ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCCCEEE----eCCcCHHHHHHHHHcCCCEEE
Confidence 223333222344556888888877666766 455656888899999999653
No 48
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=96.74 E-value=0.011 Score=55.07 Aligned_cols=166 Identities=12% Similarity=0.098 Sum_probs=101.1
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE--EeCCHh-hHHHHHHcCCCEEEEeccC-ch
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV--LTPNLK-GFEAAVAAGAKEVAIFASA-SE 197 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~--l~~n~~-~ie~a~~~Gv~~v~i~~~~-Sd 197 (398)
.+-++.+ +.|++.+.+.... ..++|.+.--..+.+.+|+..+..+-+ ++.+.. -++.+.++|++.|.+..-. ++
T Consensus 16 ~~~i~~~-~~gad~lHvDvmD-G~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea~~~ 93 (231)
T 3ctl_A 16 KEQIEFI-DSHADYFHIDIMD-GHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETING 93 (231)
T ss_dssp HHHHHHH-HTTCSCEEEEEEC-SSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGGCTT
T ss_pred HHHHHHH-HcCCCEEEEEEEe-CccCccchhcHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEECcccCCc
Confidence 3455666 8999986664321 112343332335677778655554444 344543 3788999999999886433 22
Q ss_pred HHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc----cCcCc
Q 015894 198 SFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLG----DTIGV 273 (398)
Q Consensus 198 ~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~----DT~G~ 273 (398)
.+.++++.+|++|..+.+.+. |. ++.+.+.++. .++|.|.+. -..|.
T Consensus 94 ----------------~~~~~i~~i~~~G~k~gv~ln-----p~---tp~~~~~~~l-----~~~D~VlvmsV~pGfggQ 144 (231)
T 3ctl_A 94 ----------------QAFRLIDEIRRHDMKVGLILN-----PE---TPVEAMKYYI-----HKADKITVMTVDPGFAGQ 144 (231)
T ss_dssp ----------------THHHHHHHHHHTTCEEEEEEC-----TT---CCGGGGTTTG-----GGCSEEEEESSCTTCSSC
T ss_pred ----------------cHHHHHHHHHHcCCeEEEEEE-----CC---CcHHHHHHHH-----hcCCEEEEeeeccCcCCc
Confidence 134678888999999875443 22 2334443332 268877642 22343
Q ss_pred CCHHHHHHHHHHHHhhCC----CCeEEEEeCCccchHHHHHHHHHHhCCCEEe
Q 015894 274 GTPGTVIPMLEAVLDAVP----VDKLAVHFHDTYGQALSNILASLQMGISTVD 322 (398)
Q Consensus 274 ~~P~~v~~lv~~l~~~~p----~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD 322 (398)
.....+.+.++.+|+..+ +.+|++ |-|.-..|+-.++++||+.+=
T Consensus 145 ~f~~~~l~kI~~lr~~~~~~~~~~~I~V----dGGI~~~~~~~~~~aGAd~~V 193 (231)
T 3ctl_A 145 PFIPEMLDKLAELKAWREREGLEYEIEV----DGSCNQATYEKLMAAGADVFI 193 (231)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTCCCEEEE----ESCCSTTTHHHHHHHTCCEEE
T ss_pred cccHHHHHHHHHHHHHHhccCCCceEEE----ECCcCHHHHHHHHHcCCCEEE
Confidence 344456666777776542 345666 678778889999999998663
No 49
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=96.71 E-value=0.08 Score=49.69 Aligned_cols=189 Identities=17% Similarity=0.151 Sum_probs=122.3
Q ss_pred EEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--C---C
Q 015894 100 IVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--P---N 174 (398)
Q Consensus 100 i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~---n 174 (398)
++|-|+= +-.-+.++..++++...+.|+..+-+ +|.|+| ...+.++ -.++++...+ | +
T Consensus 30 ~IDhTlL------~p~~t~~~i~~lc~eA~~~~~~aVcV----~p~~v~------~a~~~L~-~s~v~v~tVigFP~G~~ 92 (239)
T 3ngj_A 30 YIDHTLL------KADATEEQIRKLCSEAAEYKFASVCV----NPTWVP------LCAELLK-GTGVKVCTVIGFPLGAT 92 (239)
T ss_dssp TEEEEEC------CTTCCHHHHHHHHHHHHHHTCSEEEE----CGGGHH------HHHHHHT-TSSCEEEEEESTTTCCS
T ss_pred hcCcccC------CCCCCHHHHHHHHHHHHhcCCcEEEE----CHHHHH------HHHHHhC-CCCCeEEEEeccCCCCC
Confidence 5676761 22567888889999999999998887 344443 2223332 2346666554 2 1
Q ss_pred -----HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHH
Q 015894 175 -----LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSK 249 (398)
Q Consensus 175 -----~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~ 249 (398)
....+.|++.|+++|.+.+.+.... .-+++..++.+..+++.+.. ..+- +.... +..+.+.
T Consensus 93 ~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk-----~g~~~~v~~eI~~v~~a~~~--~~lK--VIlEt-----~~Lt~ee 158 (239)
T 3ngj_A 93 PSEVKAYETKVAVEQGAEEVDMVINIGMVK-----AKKYDDVEKDVKAVVDASGK--ALTK--VIIEC-----CYLTNEE 158 (239)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHHTT--SEEE--EECCG-----GGSCHHH
T ss_pred chHHHHHHHHHHHHcCCCEEEEEeehHHhc-----cccHHHHHHHHHHHHHHhcC--CceE--EEEec-----CCCCHHH
Confidence 1356789999999999988765321 23567788888888888753 3332 22222 2357888
Q ss_pred HHHHHHHHHhCCCCEEEEcc--CcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 250 VAYVSKQLYDMGCSEISLGD--TIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 250 l~~~a~~l~~~Gad~I~L~D--T~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
+...++.+.++|+|.|--.- +.|..++++++.+-+.+...+ .+-.==-.- -...+++-+++||++|-+|-
T Consensus 159 i~~a~~ia~~aGADfVKTSTGf~~ggAt~~dv~lmr~~vg~~v-----~VKasGGIr-t~~da~~~i~aGA~riGtS~ 230 (239)
T 3ngj_A 159 KVEVCKRCVAAGAEYVKTSTGFGTHGATPEDVKLMKDTVGDKA-----LVKAAGGIR-TFDDAMKMINNGASRIGASA 230 (239)
T ss_dssp HHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHGGGS-----EEEEESSCC-SHHHHHHHHHTTEEEEEESC
T ss_pred HHHHHHHHHHHCcCEEECCCCCCCCCCCHHHHHHHHHhhCCCc-----eEEEeCCCC-CHHHHHHHHHhcccceeccc
Confidence 99999999999999886652 246678888877666553332 222211111 12678888899999886663
No 50
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=96.71 E-value=0.019 Score=52.46 Aligned_cols=152 Identities=18% Similarity=0.171 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEE-eCCHhhHHHHHHcCCCEEEEeccCch
Q 015894 119 VVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVL-TPNLKGFEAAVAAGAKEVAIFASASE 197 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l-~~n~~~ie~a~~~Gv~~v~i~~~~Sd 197 (398)
++-+++++.+.+.|++.||++.-. + +..+.++.+++ ++....+= +-+.++++.|+++|++.++.- . .+
T Consensus 25 ~~~~~~~~~l~~gGv~~iel~~k~-~-------~~~~~i~~~~~-~~~~~gag~vl~~d~~~~A~~~GAd~v~~~-~-~d 93 (207)
T 2yw3_A 25 EDLLGLARVLEEEGVGALEITLRT-E-------KGLEALKALRK-SGLLLGAGTVRSPKEAEAALEAGAAFLVSP-G-LL 93 (207)
T ss_dssp CCHHHHHHHHHHTTCCEEEEECSS-T-------HHHHHHHHHTT-SSCEEEEESCCSHHHHHHHHHHTCSEEEES-S-CC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCC-h-------HHHHHHHHHhC-CCCEEEeCeEeeHHHHHHHHHcCCCEEEcC-C-CC
Confidence 345789999999999999998532 1 23455666666 65443322 225578999999999998753 1 11
Q ss_pred HHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHH
Q 015894 198 SFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPG 277 (398)
Q Consensus 198 ~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~ 277 (398)
.++++.+++.|..+... -.+++++ .++.++|+|.|.+ .. ..+.
T Consensus 94 ------------------~~v~~~~~~~g~~~i~G-----------~~t~~e~----~~A~~~Gad~v~~---fp-a~~~ 136 (207)
T 2yw3_A 94 ------------------EEVAALAQARGVPYLPG-----------VLTPTEV----ERALALGLSALKF---FP-AEPF 136 (207)
T ss_dssp ------------------HHHHHHHHHHTCCEEEE-----------ECSHHHH----HHHHHTTCCEEEE---TT-TTTT
T ss_pred ------------------HHHHHHHHHhCCCEEec-----------CCCHHHH----HHHHHCCCCEEEE---ec-Cccc
Confidence 25567778888875421 1245553 3455789999888 11 1111
Q ss_pred HHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEe
Q 015894 278 TVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVD 322 (398)
Q Consensus 278 ~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD 322 (398)
.=.++++.++..+|.+|+-.=+ |....|+-.-+.+|++.|-
T Consensus 137 gG~~~lk~l~~~~~~ipvvaiG----GI~~~n~~~~l~aGa~~va 177 (207)
T 2yw3_A 137 QGVRVLRAYAEVFPEVRFLPTG----GIKEEHLPHYAALPNLLAV 177 (207)
T ss_dssp THHHHHHHHHHHCTTCEEEEBS----SCCGGGHHHHHTCSSBSCE
T ss_pred cCHHHHHHHHhhCCCCcEEEeC----CCCHHHHHHHHhCCCcEEE
Confidence 0126678888888776665433 4445688888999998543
No 51
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.70 E-value=0.099 Score=46.81 Aligned_cols=165 Identities=17% Similarity=0.131 Sum_probs=96.8
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc-cCCcEEE--EeCC-Hhh-HHHHHHcCCCEEE
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV-EGARFPV--LTPN-LKG-FEAAVAAGAKEVA 190 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~-~~~~l~~--l~~n-~~~-ie~a~~~Gv~~v~ 190 (398)
.+.++-+++++.+.+ |++.||+|.+..- .+..++++.+++. ++..+.+ .+.+ ... ++.+.++|+|.|.
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev~~~~~~------~~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~ 82 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIELGTPLIK------AEGLSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVT 82 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEECHHHHH------HHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHhhc-cCCEEEECcHHHH------hhCHHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEE
Confidence 467888999999988 9999999864310 0112345556643 4555443 3345 344 7889999999998
Q ss_pred EeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc--
Q 015894 191 IFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLG-- 268 (398)
Q Consensus 191 i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~-- 268 (398)
+.....+ +.+.++++.+++.|..+. +++ .+..+|+.. ++.+.+.|+|.+.+.
T Consensus 83 vh~~~~~---------------~~~~~~~~~~~~~g~~~g--v~~------~s~~~p~~~---~~~~~~~g~d~v~~~~~ 136 (207)
T 3ajx_A 83 VLGSADD---------------STIAGAVKAAQAHNKGVV--VDL------IGIEDKATR---AQEVRALGAKFVEMHAG 136 (207)
T ss_dssp EETTSCH---------------HHHHHHHHHHHHHTCEEE--EEC------TTCSSHHHH---HHHHHHTTCSEEEEECC
T ss_pred EeccCCh---------------HHHHHHHHHHHHcCCceE--EEE------ecCCChHHH---HHHHHHhCCCEEEEEec
Confidence 7655432 123456677778888753 221 122245542 334456789988332
Q ss_pred cC---cCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEe
Q 015894 269 DT---IGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVD 322 (398)
Q Consensus 269 DT---~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD 322 (398)
-+ .| ..|.. +.++.++.. ..++.+=+ |....|.-.++++||+.|=
T Consensus 137 ~~~~~~g-~~~~~--~~i~~~~~~--~~pi~v~G----GI~~~~~~~~~~aGad~vv 184 (207)
T 3ajx_A 137 LDEQAKP-GFDLN--GLLAAGEKA--RVPFSVAG----GVKVATIPAVQKAGAEVAV 184 (207)
T ss_dssp HHHHTST-TCCTH--HHHHHHHHH--TSCEEEES----SCCGGGHHHHHHTTCSEEE
T ss_pred ccccccC-CCchH--HHHHHhhCC--CCCEEEEC----CcCHHHHHHHHHcCCCEEE
Confidence 11 23 23444 556666542 23344422 3333488888999999664
No 52
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=96.69 E-value=0.56 Score=46.36 Aligned_cols=229 Identities=17% Similarity=0.136 Sum_probs=136.8
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe-CCHhhHHHHHHcCCCEEEEecc
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT-PNLKGFEAAVAAGAKEVAIFAS 194 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~-~n~~~ie~a~~~Gv~~v~i~~~ 194 (398)
.+.+..++-+..|.++|.+.|.++.+. .+++ +.+..+++.-++.+.+=. -+.+-...++++|++.+||
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp~-------~~~a-~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~dklRI--- 111 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVPH-------KEDV-EALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHGIRI--- 111 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECCS-------HHHH-HHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSEEEE---
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCC-------hHHH-HHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCCeEEE---
Confidence 567788889999999999999999753 1222 334444433345554432 4666666789999999998
Q ss_pred CchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC------CCCCHHH----HHHHHHHHHhCCCCE
Q 015894 195 ASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE------GMVPPSK----VAYVSKQLYDMGCSE 264 (398)
Q Consensus 195 ~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~------~r~~~~~----l~~~a~~l~~~Gad~ 264 (398)
|+- |++. -++++++++.||++|..++.-+. +|+-+. +..+++. .++.++.+.++|.+.
T Consensus 112 -NPG----Nig~-----~~~~~~vv~~ak~~~~piRIGvN--~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~ 179 (366)
T 3noy_A 112 -NPG----NIGK-----EEIVREIVEEAKRRGVAVRIGVN--SGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTN 179 (366)
T ss_dssp -CHH----HHSC-----HHHHHHHHHHHHHHTCEEEEEEE--GGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred -CCc----ccCc-----hhHHHHHHHHHHHcCCCEEEecC--CcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCe
Confidence 332 4542 24567899999999999997666 454221 1124443 334667788889874
Q ss_pred --EEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH------HHHHHHHHH-hCC-CEEeeccccCCCCCCC
Q 015894 265 --ISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA------LSNILASLQ-MGI-STVDSSVSGLGGCPYA 334 (398)
Q Consensus 265 --I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA------~ANalaAl~-aGa-~~VD~Sv~GlGecp~a 334 (398)
|.++-+ .+..+-...+.+.+.. +-||++-.-+- |.. -+-.+-++. .|. |.|-+|+. +
T Consensus 180 iviS~K~S----~v~~~i~ayr~la~~~-dyPLHlGvTEA-G~~~~G~ikSsigiG~LL~dGIGDTIRVSLt---~---- 246 (366)
T 3noy_A 180 YKVSIKGS----DVLQNVRANLIFAERT-DVPLHIGITEA-GMGTKGIIKSSVGIGILLYMGIGDTVRVSLT---D---- 246 (366)
T ss_dssp EEEEEECS----SHHHHHHHHHHHHHHC-CCCEEECCSSC-CSHHHHHHHHHHHHHHHHHTTCCSEECCCCS---S----
T ss_pred EEEeeecC----ChHHHHHHHHHHHhcc-CCCEEEccCCC-CCCcceeeehHHHHHHHHHhcccceEEEeCC---C----
Confidence 444443 3444444444444443 34565554443 443 333444555 375 67777766 1
Q ss_pred CCCCCCccHHHHHHHH---HhCCC--------------CCccChHHHHHHHHHHHHHh-CCCCCCCccccccc
Q 015894 335 KGASGNVATEDVVYML---NGLGV--------------RTNVDIRKLMIAGDFICKHL-GRTSGSKTAIALSK 389 (398)
Q Consensus 335 ~graGNa~lE~vv~~L---~~~Gi--------------~t~iDl~~L~~~~~~v~~~~-g~~~~~~~pivG~~ 389 (398)
.|.||+-.+. +.+|+ ++.+|+ .++++.+++.+ +++.|-+.++.|.-
T Consensus 247 ------~p~~Ev~va~~ILqslglR~~g~~~ISCPtCGRt~~dl---~~~~~~ie~~l~~~~~~lkVAVMGCv 310 (366)
T 3noy_A 247 ------DPVVEVETAYEILKSLGLRRRGVEIVACPTCGRIEVDL---PKVVKEVQEKLSGVKTPLKVAVMGCV 310 (366)
T ss_dssp ------CHHHHHHHHHHHHHHTTSCCSSCEEEECCCCTTCCSCH---HHHHHHHHHHTTTCCSCCEEEEESSS
T ss_pred ------CcHHHHHHHHHHHHhcCCCcCCCEEEECCCCCCccccH---HHHHHHHHHHHhCCCCCCEEEEEccc
Confidence 2577775443 33333 355666 45555666555 34556677777653
No 53
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=96.67 E-value=0.095 Score=52.48 Aligned_cols=181 Identities=12% Similarity=0.082 Sum_probs=116.7
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCC-----CCCc---c-cC-----C-------CCHHHHHHHHH-hccCCcEEEEe-
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFV-----SPKW---V-PQ-----L-------ADAKDVMAAIQ-NVEGARFPVLT- 172 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~-----~~~~---~-p~-----~-------~D~~~v~~~i~-~~~~~~l~~l~- 172 (398)
=+.++-.++++...++|.+.+-.+.+- +|.. . +. + .-.++-+..+. .....-+..++
T Consensus 41 Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~st 120 (385)
T 1vli_A 41 GKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLST 120 (385)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECB
T ss_pred ccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEc
Confidence 478899999999999999999998542 2321 0 00 0 00011111111 11112233343
Q ss_pred -CCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHH
Q 015894 173 -PNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVA 251 (398)
Q Consensus 173 -~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~ 251 (398)
....+++...+.|++.+.|... +. .+ ..+++++-+.|.+|- |+ .+..+.+++.
T Consensus 121 pfD~~svd~l~~~~vd~~KIgS~--~~--------------~N-~pLL~~va~~gKPVi--LS-------tGmaTl~Ei~ 174 (385)
T 1vli_A 121 VCDEGSADLLQSTSPSAFKIASY--EI--------------NH-LPLLKYVARLNRPMI--FS-------TAGAEISDVH 174 (385)
T ss_dssp CCSHHHHHHHHTTCCSCEEECGG--GT--------------TC-HHHHHHHHTTCSCEE--EE-------CTTCCHHHHH
T ss_pred cCCHHHHHHHHhcCCCEEEECcc--cc--------------cC-HHHHHHHHhcCCeEE--EE-------CCCCCHHHHH
Confidence 4677888888889999888532 11 11 134566666799875 33 2446899999
Q ss_pred HHHHHHHhCCCCEEEEcc-CcCcCCHHHHHHH--HHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeec
Q 015894 252 YVSKQLYDMGCSEISLGD-TIGVGTPGTVIPM--LEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 252 ~~a~~l~~~Gad~I~L~D-T~G~~~P~~v~~l--v~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
..++.+.+.|.+.|.|+- +.++=+|....+| |..+++.+|..+|++=.|-. |- .+-++||+.+||++|+.=
T Consensus 175 ~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpVG~SdHt~-G~-~~~~~AAvAlGA~iIEkH 248 (385)
T 1vli_A 175 EAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGFSDHSE-HP-TEAPCAAVRLGAKLIEKH 248 (385)
T ss_dssp HHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEEEECCS-SS-SHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCEEeCCCCC-Cc-hHHHHHHHHcCCCEEEeC
Confidence 999999999986666642 4445455554444 78888989778899866653 42 778899999999988654
No 54
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=96.66 E-value=0.066 Score=48.84 Aligned_cols=222 Identities=17% Similarity=0.103 Sum_probs=116.1
Q ss_pred CCCccc--CCCCCCCCC----HHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--CC
Q 015894 103 VGPRDG--LQNEKNIVP----AVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--PN 174 (398)
Q Consensus 103 ~TLRDG--~Q~~~~~~~----~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~n 174 (398)
.-+||| .-..++.+. .++-.++++.+.+.|++.|++.-..... +......+.++.+++..++.+.+.. .+
T Consensus 11 id~~~g~~~~v~g~~~~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~~--~~~~~~~~~i~~i~~~~~ipvi~~g~i~~ 88 (253)
T 1h5y_A 11 LDIDGGAKVVVKGVNFQGIREVGDPVEMAVRYEEEGADEIAILDITAAP--EGRATFIDSVKRVAEAVSIPVLVGGGVRS 88 (253)
T ss_dssp EEECGGGCEECTTCCCHHHHEEECHHHHHHHHHHTTCSCEEEEECCCCT--TTHHHHHHHHHHHHHHCSSCEEEESSCCS
T ss_pred EEEcCCceEEEEcccccceeecccHHHHHHHHHHcCCCEEEEEeCCccc--cCCcccHHHHHHHHHhcCCCEEEECCCCC
Confidence 345777 333333332 2345789999999999999986432211 0000112334444433345554432 46
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc-EEEEEeee------ecCCCCCC-CC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIP-VRGYLSCV------VGCPVEGM-VP 246 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~-v~~~l~~~------fg~~~~~r-~~ 246 (398)
..+++.++++|++.|.+-.. .+.....+.+.++++|.. +...+..- .-....+. .+
T Consensus 89 ~~~~~~~~~~Gad~V~i~~~----------------~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~ 152 (253)
T 1h5y_A 89 LEDATTLFRAGADKVSVNTA----------------AVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREAT 152 (253)
T ss_dssp HHHHHHHHHHTCSEEEESHH----------------HHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEE
T ss_pred HHHHHHHHHcCCCEEEEChH----------------HhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecC
Confidence 78889999999999988532 111111223344555642 22222210 00000010 00
Q ss_pred HHHHHHHHHHHHhCCCCEEEE--ccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH-HHHHHHHHHhCCCEEee
Q 015894 247 PSKVAYVSKQLYDMGCSEISL--GDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA-LSNILASLQMGISTVDS 323 (398)
Q Consensus 247 ~~~l~~~a~~l~~~Gad~I~L--~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA-~ANalaAl~aGa~~VD~ 323 (398)
.....+.++.+.+.|++.|.+ .+..|..... -.++++.+++.. .+|+..= -|.. ..++..++++||+.|=+
T Consensus 153 ~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~-~~~~i~~l~~~~-~~pvia~----GGi~~~~~~~~~~~~Ga~~v~v 226 (253)
T 1h5y_A 153 GLDAVKWAKEVEELGAGEILLTSIDRDGTGLGY-DVELIRRVADSV-RIPVIAS----GGAGRVEHFYEAAAAGADAVLA 226 (253)
T ss_dssp EEEHHHHHHHHHHHTCSEEEEEETTTTTTCSCC-CHHHHHHHHHHC-SSCEEEE----SCCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHhCCCCEEEEecccCCCCcCcC-CHHHHHHHHHhc-CCCEEEe----CCCCCHHHHHHHHHcCCcHHHH
Confidence 012334567778899999887 4443333221 134556666554 2344443 3443 36777788899986643
Q ss_pred ccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCC
Q 015894 324 SVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRT 357 (398)
Q Consensus 324 Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~t 357 (398)
.-.=+.. ..+++++...|++.|++.
T Consensus 227 gsal~~~---------~~~~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 227 ASLFHFR---------VLSIAQVKRYLKERGVEV 251 (253)
T ss_dssp SHHHHTT---------SSCHHHHHHHHHHTTCBC
T ss_pred HHHHHcC---------CCCHHHHHHHHHHcCCCC
Confidence 3211211 235789999998888753
No 55
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=96.64 E-value=0.08 Score=50.30 Aligned_cols=194 Identities=15% Similarity=0.126 Sum_probs=121.0
Q ss_pred CCCHHHHHHHHHHHHhc--CCCEEEEecCCCCCcccCCCCHHHHHHHHH--hccCCcEEEEe--C----C----HhhHHH
Q 015894 115 IVPAVVKVELIKLLVSS--GLAVVEATSFVSPKWVPQLADAKDVMAAIQ--NVEGARFPVLT--P----N----LKGFEA 180 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~a--Gv~~IEvG~~~~~~~~p~~~D~~~v~~~i~--~~~~~~l~~l~--~----n----~~~ie~ 180 (398)
.-+.++..++++...+. |+..+-+ +|.|+| ...+.++ ..+++++.+.+ | + ...++.
T Consensus 24 ~~t~~~i~~lc~eA~~~~~~~~aVcV----~p~~v~------~a~~~L~~~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~ 93 (260)
T 1p1x_A 24 DDTDEKVIALCHQAKTPVGNTAAICI----YPRFIP------IARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRA 93 (260)
T ss_dssp TCCHHHHHHHHHHTEETTEECSEEEC----CGGGHH------HHHHHHHHTTCTTSEEEEEESTTTCCSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhccCCceEEEE----CHHHHH------HHHHHhhhcCCCCceEEEEeCCCCCCCcHHHHHHHHHH
Confidence 45788888888888887 8887765 454443 2334444 22256776555 2 1 136788
Q ss_pred HHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhC
Q 015894 181 AVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM 260 (398)
Q Consensus 181 a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~ 260 (398)
|++.|+++|.+.+..... ..-..+...+.+..+.+.|.+.|..+-+-|... ..++++.+...++...++
T Consensus 94 Av~~GAdEIDmVinig~l-----~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~------~L~d~e~i~~a~~ia~ea 162 (260)
T 1p1x_A 94 AIAYGADEVDVVFPYRAL-----MAGNEQVGFDLVKACKEACAAANVLLKVIIETG------ELKDEALIRKASEISIKA 162 (260)
T ss_dssp HHHHTCSEEEEECCHHHH-----HTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHH------HHCSHHHHHHHHHHHHHT
T ss_pred HHHcCCCEEEEeccHHhh-----hCCCHHHHHHHHHHHHHHhcccCCeEEEEEecc------cCCcHHHHHHHHHHHHHh
Confidence 999999999998875432 123456788889888998887777655434321 124556577889999999
Q ss_pred CCCEEEEcc--CcCcCCHHHHHHHHHHHHhhC-CCCeEEEEeC---CccchHHHHHHHHH-HhCCCEEeeccccCCC
Q 015894 261 GCSEISLGD--TIGVGTPGTVIPMLEAVLDAV-PVDKLAVHFH---DTYGQALSNILASL-QMGISTVDSSVSGLGG 330 (398)
Q Consensus 261 Gad~I~L~D--T~G~~~P~~v~~lv~~l~~~~-p~~~l~~H~H---nd~GlA~ANalaAl-~aGa~~VD~Sv~GlGe 330 (398)
|+|.|--.- +.|..+|++++-+.+.+++.. .. ++++..- .++--|++-..++. ..|.+|++....=+|-
T Consensus 163 GADfVKTSTGf~~~gAt~e~v~lm~~~I~~~~~g~-~v~VKaaGGIrt~~~al~~i~aga~~lG~~w~~~~~~RiGt 238 (260)
T 1p1x_A 163 GADFIKTSTGKVAVNATPESARIMMEVIRDMGVEK-TVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGA 238 (260)
T ss_dssp TCSEEECCCSCSSCCCCHHHHHHHHHHHHHHTCTT-TCEEECBSSCCSHHHHHHHHHHHHHHHCTTSCSTTTBCEEE
T ss_pred CCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhcCCC-CceEEEeCCCCCHHHHHHHHHhhhhhccccccccCceEeec
Confidence 999876552 235669999998888777543 21 2444322 12223333322222 2466677666665554
No 56
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=96.63 E-value=0.035 Score=51.59 Aligned_cols=185 Identities=13% Similarity=0.073 Sum_probs=104.8
Q ss_pred HHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe-C--C----------------------H
Q 015894 121 KVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT-P--N----------------------L 175 (398)
Q Consensus 121 k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~-~--n----------------------~ 175 (398)
-.+.++.+.++|++.||+..+.. .+.+++.+.+++ .++++.++. + + .
T Consensus 25 ~~~~l~~~~~~G~~~vEl~~~~~-------~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 96 (269)
T 3ngf_A 25 FLERFRLAAEAGFGGVEFLFPYD-------FDADVIARELKQ-HNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVD 96 (269)
T ss_dssp HHHHHHHHHHTTCSEEECSCCTT-------SCHHHHHHHHHH-TTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCCcc-------CCHHHHHHHHHH-cCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHH
Confidence 34577788899999999986421 356666666653 255555432 1 0 0
Q ss_pred hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCH----HHHHHHHHHHHHHHHhCCCcEEEEEeeeec--CCCCCCCCHHH
Q 015894 176 KGFEAAVAAGAKEVAIFASASESFSKSNINCTI----EDSLIRYRDVALAARELSIPVRGYLSCVVG--CPVEGMVPPSK 249 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~----~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg--~~~~~r~~~~~ 249 (398)
+.++.|.+.|++.|.+... .+ .+.+. +...+.+.++.++|++.|+.+. +...-. -|...-.+++.
T Consensus 97 ~~i~~A~~lGa~~v~~~~g-~~------~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lE~~n~~~~~~~~~~~~~~ 167 (269)
T 3ngf_A 97 IALHYALALDCRTLHAMSG-IT------EGLDRKACEETFIENFRYAADKLAPHGITVL--VEPLNTRNMPGYFIVHQLE 167 (269)
T ss_dssp HHHHHHHHTTCCEEECCBC-BC------TTSCHHHHHHHHHHHHHHHHHHHGGGTCEEE--ECCCCTTTSTTBSCCCHHH
T ss_pred HHHHHHHHcCCCEEEEccC-CC------CCCCHHHHHHHHHHHHHHHHHHHHHcCCEEE--EeeCCcccCccchhcCHHH
Confidence 1255677889999987554 21 12233 3455556678888899998764 221000 00111246666
Q ss_pred HHHHHHHHHhCCCCEEE-EccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccC
Q 015894 250 VAYVSKQLYDMGCSEIS-LGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGL 328 (398)
Q Consensus 250 l~~~a~~l~~~Gad~I~-L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~Gl 328 (398)
+.++++.+ +.+.+. .-|+.=...-. .+....++. +.+--..+|++|..|
T Consensus 168 ~~~l~~~v---~~~~vg~~~D~~h~~~~g--~d~~~~l~~-~~~~i~~vHl~D~~~------------------------ 217 (269)
T 3ngf_A 168 AVGLVKRV---NRPNVAVQLDLYHAQIMD--GDLTRLIEK-MNGAFSHVQIASVPD------------------------ 217 (269)
T ss_dssp HHHHHHHH---CCTTEEEEEEHHHHHHHT--CCHHHHHHH-TTTSEEEEEECCTTT------------------------
T ss_pred HHHHHHHh---CCCCCCeEEEhhhHHhhC--CCHHHHHHH-hhhhEEEEEEecCCC------------------------
Confidence 66666544 433332 33543111100 022333333 333347899999753
Q ss_pred CCCCCCCCCCCCccHHHHHHHHHhCCCC
Q 015894 329 GGCPYAKGASGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 329 Gecp~a~graGNa~lE~vv~~L~~~Gi~ 356 (398)
.+ .+| .|..+...++..|++.|++
T Consensus 218 -r~--~~G-~G~id~~~~~~~L~~~gy~ 241 (269)
T 3ngf_A 218 -RH--EPD-EGELNYPYLFSVLESVGYR 241 (269)
T ss_dssp -CC--CTT-SSSBCHHHHHHHHHHTTCC
T ss_pred -CC--CCC-CCccCHHHHHHHHHHcCCC
Confidence 11 133 7899999999999998875
No 57
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.62 E-value=0.072 Score=51.60 Aligned_cols=139 Identities=10% Similarity=0.014 Sum_probs=93.7
Q ss_pred hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCH-HHHHHHH
Q 015894 176 KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPP-SKVAYVS 254 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~-~~l~~~a 254 (398)
..++.+++.|++.|.+.+.... ..+..+.++.+.++++.|++.|+.+.+.+- .-|.......++ +.+.+.+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~-------d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~-~~g~~v~~~~~~~~~v~~aa 183 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRS-------DEDAQQRLNMVKEFNELCHSNGLLSIIEPV-VRPPRCGDKFDREQAIIDAA 183 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECT-------TSCHHHHHHHHHHHHHHHHTTTCEEEEEEE-ECCCSSCSCCCHHHHHHHHH
T ss_pred hhHHHHHHcCCCEEEEEEEcCC-------CccHHHHHHHHHHHHHHHHHcCCcEEEEEE-CCCCccccCCChhHHHHHHH
Confidence 5688999999998875432211 012357889999999999999999765432 222222222456 8888889
Q ss_pred HHHHhCCCCEEEEccC-cCcCCHHHHHHHHHHHHhhCCCCe-EEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 255 KQLYDMGCSEISLGDT-IGVGTPGTVIPMLEAVLDAVPVDK-LAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 255 ~~l~~~Gad~I~L~DT-~G~~~P~~v~~lv~~l~~~~p~~~-l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
+++.++|+|.|.+.=+ .|...++.+.++++......+ .| |.+=+=.+.-..+.+.-.++++|++.|-+
T Consensus 184 ~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~-~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 184 KELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHIN-MPWVILSSGVDEKLFPRAVRVAMEAGASGFLA 253 (304)
T ss_dssp HHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCC-SCEEECCTTSCTTTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCC-CCeEEEecCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999877553 233478888888887555433 24 33322225556667888889999976643
No 58
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=96.58 E-value=0.1 Score=48.32 Aligned_cols=177 Identities=16% Similarity=0.132 Sum_probs=115.4
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--C----C----HhhHHHHHHc
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--P----N----LKGFEAAVAA 184 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~----n----~~~ie~a~~~ 184 (398)
.-+.++..++++...+.|++.+-+. |.|++ ...+.++. .++++...+ | + ...++.|++.
T Consensus 15 ~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~------~~~~~l~~-~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~ 83 (220)
T 1ub3_A 15 TATLEEVAKAAEEALEYGFYGLCIP----PSYVA------WVRARYPH-APFRLVTVVGFPLGYQEKEVKALEAALACAR 83 (220)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEECC----GGGHH------HHHHHCTT-CSSEEEEEESTTTCCSCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEC----HHHHH------HHHHHhCC-CCceEEEEecCCCCCCchHHHHHHHHHHHHc
Confidence 4578889999999999999988863 43332 11222221 235555443 2 1 1367899999
Q ss_pred CCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCE
Q 015894 185 GAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSE 264 (398)
Q Consensus 185 Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~ 264 (398)
|++.|.+.+..... ..-+.++.++.+..+++.+.+.+++|- +. . ...+++.+...++.+.++|+|.
T Consensus 84 GAdevd~vinig~~-----~~g~~~~v~~ei~~v~~a~~~~~lkvI--le--t-----~~l~~e~i~~a~~ia~eaGADf 149 (220)
T 1ub3_A 84 GADEVDMVLHLGRA-----KAGDLDYLEAEVRAVREAVPQAVLKVI--LE--T-----GYFSPEEIARLAEAAIRGGADF 149 (220)
T ss_dssp TCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHSTTSEEEEE--CC--G-----GGSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCEEEecccchhh-----hCCCHHHHHHHHHHHHHHHcCCCceEE--Ee--c-----CCCCHHHHHHHHHHHHHhCCCE
Confidence 99999998765432 122567788888888888765444442 21 1 2346888999999999999998
Q ss_pred EEEcc--CcCcCCHHHHHHHHHHHHhhCCCCeEEEEe--CCccchHHHHHHHHHHhCCCEEeec
Q 015894 265 ISLGD--TIGVGTPGTVIPMLEAVLDAVPVDKLAVHF--HDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 265 I~L~D--T~G~~~P~~v~~lv~~l~~~~p~~~l~~H~--Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
|--.= +.|..+|+++..+.+.+... ++|-.=+ + |. ..+++-+++|+++|-+|
T Consensus 150 VKTsTGf~~~gat~~dv~~m~~~vg~~---v~VkaaGGir-t~----~~al~~i~aGa~RiG~S 205 (220)
T 1ub3_A 150 LKTSTGFGPRGASLEDVALLVRVAQGR---AQVKAAGGIR-DR----ETALRMLKAGASRLGTS 205 (220)
T ss_dssp EECCCSSSSCCCCHHHHHHHHHHHTTS---SEEEEESSCC-SH----HHHHHHHHTTCSEEEET
T ss_pred EEeCCCCCCCCCCHHHHHHHHHhhCCC---CeEEEECCCC-CH----HHHHHHHHCCCcccchh
Confidence 86552 34667888888877665222 2332222 2 32 56667778999988665
No 59
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=96.51 E-value=0.085 Score=50.81 Aligned_cols=189 Identities=14% Similarity=0.153 Sum_probs=125.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHh---ccCCcEEEE---eCCHhhHHHHHHcCCCE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQN---VEGARFPVL---TPNLKGFEAAVAAGAKE 188 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~---~~~~~l~~l---~~n~~~ie~a~~~Gv~~ 188 (398)
....+....++++-.+.+-+.|=-.++..-++. ..+.+...++. ..++.+... +.+.+.+..++++|...
T Consensus 25 v~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~----g~~~~~~~v~~~a~~~~VPValHlDHg~~~e~i~~ai~~GFtS 100 (286)
T 1gvf_A 25 IHNAETIQAILEVCSEMRSPVILAGTPGTFKHI----ALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRS 100 (286)
T ss_dssp CCSHHHHHHHHHHHHHHTCCCEEEECTTHHHHS----CHHHHHHHHHHHHHHTTSCBEEEEEEECCHHHHHHHHHTTCCE
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhc----CHHHHHHHHHHHHHhCCCcEEEEcCCCCCHHHHHHHHHcCCCe
Confidence 567888888999999999998766554321221 23333333332 123444443 24678899999999988
Q ss_pred EEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC--------CCCCHHHHHHHHHHHHhC
Q 015894 189 VAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE--------GMVPPSKVAYVSKQLYDM 260 (398)
Q Consensus 189 v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~--------~r~~~~~l~~~a~~l~~~ 260 (398)
|.+=.| ..+.+|+++.-++++++|++.|+.|++.|-..-|.++. ..++|+...++++ +.
T Consensus 101 VMiDgS----------~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~---~T 167 (286)
T 1gvf_A 101 AMIDGS----------HFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVE---LT 167 (286)
T ss_dssp EEECCT----------TSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHH---HH
T ss_pred EEECCC----------CCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHH---HH
Confidence 876322 23578999999999999999999999888776443432 2388988877765 47
Q ss_pred CCCEEEEc--cCcCcC--CHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 261 GCSEISLG--DTIGVG--TPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 261 Gad~I~L~--DT~G~~--~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
|+|.+.++ -.=|.- .|.==.++++.+++..+ +||.+|+= -|........|++.|+.-|+.
T Consensus 168 gvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~-vpLVlHGg--SG~~~e~i~~ai~~Gv~KiNi 231 (286)
T 1gvf_A 168 GVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVD-VPLVLHGA--SDVPDEFVRRTIELGVTKVNV 231 (286)
T ss_dssp CCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCC-SCEEECCC--TTCCHHHHHHHHHTTEEEEEE
T ss_pred CCCEEEeecCccccCcCCCCccCHHHHHHHHHhcC-CCEEEECC--CCCCHHHHHHHHHCCCeEEEE
Confidence 89954433 222221 23333456777888776 57888874 477778899999999876643
No 60
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.51 E-value=0.12 Score=47.77 Aligned_cols=152 Identities=18% Similarity=0.183 Sum_probs=101.0
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHH-HhccCCcEEEE-eCCHhhHHHHHHcCCCEEEEecc
Q 015894 117 PAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAI-QNVEGARFPVL-TPNLKGFEAAVAAGAKEVAIFAS 194 (398)
Q Consensus 117 ~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i-~~~~~~~l~~l-~~n~~~ie~a~~~Gv~~v~i~~~ 194 (398)
+.++-+++++.|.+.|++.||++.-. + +..+.++.+ ++.++..+.+= +-+.++++.|+++|++.|+.-
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~k~-~-------~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~p-- 105 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTLRS-Q-------HGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTP-- 105 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEESSS-T-------HHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECS--
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecCC-c-------cHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEeC--
Confidence 45566899999999999999999532 1 233445534 35666554332 235688999999999999742
Q ss_pred CchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcC
Q 015894 195 ASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVG 274 (398)
Q Consensus 195 ~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~ 274 (398)
-.+ .++++.++++|...-. | -.+++++ .++.++|+|.|.+
T Consensus 106 ~~d------------------~~v~~~~~~~g~~~i~------G-----~~t~~e~----~~A~~~Gad~vk~------- 145 (225)
T 1mxs_A 106 GIT------------------EDILEAGVDSEIPLLP------G-----ISTPSEI----MMGYALGYRRFKL------- 145 (225)
T ss_dssp SCC------------------HHHHHHHHHCSSCEEC------E-----ECSHHHH----HHHHTTTCCEEEE-------
T ss_pred CCC------------------HHHHHHHHHhCCCEEE------e-----eCCHHHH----HHHHHCCCCEEEE-------
Confidence 111 2567888899987642 1 1345543 4456899999988
Q ss_pred CHHH-H--HHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHH-hCCCEEe
Q 015894 275 TPGT-V--IPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ-MGISTVD 322 (398)
Q Consensus 275 ~P~~-v--~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~-aGa~~VD 322 (398)
.|.. + .++++.++..+|.+|+-.= =|.-..|+-.-+. +|++.|=
T Consensus 146 FPa~~~~G~~~lk~i~~~~~~ipvvai----GGI~~~N~~~~l~~~Ga~~v~ 193 (225)
T 1mxs_A 146 FPAEISGGVAAIKAFGGPFGDIRFCPT----GGVNPANVRNYMALPNVMCVG 193 (225)
T ss_dssp TTHHHHTHHHHHHHHHTTTTTCEEEEB----SSCCTTTHHHHHHSTTBCCEE
T ss_pred ccCccccCHHHHHHHHhhCCCCeEEEE----CCCCHHHHHHHHhccCCEEEE
Confidence 4533 3 4778888888877676442 3444567777888 6888664
No 61
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=96.50 E-value=0.12 Score=50.99 Aligned_cols=179 Identities=15% Similarity=0.145 Sum_probs=117.4
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCC-----CCCc---cc-----CC-------CCHHHHHHHHH---hccCCcEEEEe
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFV-----SPKW---VP-----QL-------ADAKDVMAAIQ---NVEGARFPVLT 172 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~-----~~~~---~p-----~~-------~D~~~v~~~i~---~~~~~~l~~l~ 172 (398)
=+.++-.++++...++|.+.+-.+.|- +|.. .+ +. .-.++-+..+. +-.++.+..=.
T Consensus 32 gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~ 111 (349)
T 2wqp_A 32 GSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTL 111 (349)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEee
Confidence 378999999999999999999998542 2221 10 00 00122222222 12344444444
Q ss_pred CCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHH
Q 015894 173 PNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAY 252 (398)
Q Consensus 173 ~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~ 252 (398)
....+++...+.|++.+.|... +. + .+ .+++++-+.|.+|- |+ .+..+.+++..
T Consensus 112 ~d~~svd~l~~~~v~~~KI~S~--~~--------~---n~----~LL~~va~~gkPvi--Ls-------tGmat~~Ei~~ 165 (349)
T 2wqp_A 112 FSRAAALRLQRMDIPAYKIGSG--EC--------N---NY----PLIKLVASFGKPII--LS-------TGMNSIESIKK 165 (349)
T ss_dssp CSHHHHHHHHHHTCSCEEECGG--GT--------T---CH----HHHHHHHTTCSCEE--EE-------CTTCCHHHHHH
T ss_pred CCHHHHHHHHhcCCCEEEECcc--cc--------c---CH----HHHHHHHhcCCeEE--EE-------CCCCCHHHHHH
Confidence 5788899888899999998532 11 1 11 34566666788875 33 24458999999
Q ss_pred HHHHHHhCCCCEEEEc-cCcCcCCHHHHHHH--HHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeec
Q 015894 253 VSKQLYDMGCSEISLG-DTIGVGTPGTVIPM--LEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 253 ~a~~l~~~Gad~I~L~-DT~G~~~P~~v~~l--v~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
.++.+.+.|.+ |.|+ =+.++=+|....+| |..+++.+|..+|++=.|-. | .+-++||+.+||++|+.=
T Consensus 166 Ave~i~~~G~~-iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt~-G--~~~~~AAvAlGA~iIEkH 236 (349)
T 2wqp_A 166 SVEIIREAGVP-YALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTL-D--NYACLGAVALGGSILERH 236 (349)
T ss_dssp HHHHHHHHTCC-EEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCSS-S--SHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHcCCC-EEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCCC-c--HHHHHHHHHhCCCEEEeC
Confidence 99999999984 4443 24445445554443 78888888778999866653 4 788899999999988543
No 62
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=96.49 E-value=0.028 Score=51.51 Aligned_cols=171 Identities=13% Similarity=0.162 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE--EeCCH-hhHHHHHHcCCCEEEEecc-
Q 015894 119 VVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV--LTPNL-KGFEAAVAAGAKEVAIFAS- 194 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~--l~~n~-~~ie~a~~~Gv~~v~i~~~- 194 (398)
....+.++.+.+.|++.|+++.... .++|.+....+..+.+++..+..+.+ ++.+. +.++.+.++|++.|.+...
T Consensus 23 ~~~~~~i~~~~~~G~d~i~l~~~dg-~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~ 101 (230)
T 1rpx_A 23 SKLGEQVKAIEQAGCDWIHVDVMDG-RFVPNITIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQ 101 (230)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEEBS-SSSSCBCCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECST
T ss_pred HHHHHHHHHHHHCCCCEEEEeeccC-CcccccccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecC
Confidence 3556788899999999999984110 01122222234555566443433333 22333 4688899999999988654
Q ss_pred -CchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcC-
Q 015894 195 -ASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIG- 272 (398)
Q Consensus 195 -~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G- 272 (398)
.++. ..+.++.+++.|+.+...+. |. ++.+.+..+ ..++|.| +.++++
T Consensus 102 ~~~~~----------------~~~~~~~~~~~g~~ig~~~~-----p~---t~~e~~~~~-----~~~~d~v-l~~~~~p 151 (230)
T 1rpx_A 102 SSTIH----------------LHRTINQIKSLGAKAGVVLN-----PG---TPLTAIEYV-----LDAVDLV-LIMSVNP 151 (230)
T ss_dssp TTCSC----------------HHHHHHHHHHTTSEEEEEEC-----TT---CCGGGGTTT-----TTTCSEE-EEESSCT
T ss_pred ccchh----------------HHHHHHHHHHcCCcEEEEeC-----CC---CCHHHHHHH-----HhhCCEE-EEEEEcC
Confidence 3221 23456777788887653332 11 223332222 2578855 355543
Q ss_pred -c---CCHHHHHHHHHHHHhhCC----CCeEEEEeCCccchHHHHHHHHHHhCCCEEeec
Q 015894 273 -V---GTPGTVIPMLEAVLDAVP----VDKLAVHFHDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 273 -~---~~P~~v~~lv~~l~~~~p----~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
. -.+....+.++.+++..+ ..++.+ +.|....|+-.++++|++.|.+.
T Consensus 152 g~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v----~GGI~~~n~~~~~~aGad~vvvg 207 (230)
T 1rpx_A 152 GFGGQSFIESQVKKISDLRKICAERGLNPWIEV----DGGVGPKNAYKVIEAGANALVAG 207 (230)
T ss_dssp TCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEE----ESSCCTTTHHHHHHHTCCEEEES
T ss_pred CCCCccccHHHHHHHHHHHHHHHhcCCCceEEE----ECCCCHHHHHHHHHcCCCEEEEC
Confidence 2 123344455666665442 445544 44555578888889999988876
No 63
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=96.46 E-value=0.16 Score=49.06 Aligned_cols=200 Identities=16% Similarity=0.124 Sum_probs=114.6
Q ss_pred cEEEeCCC---cccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCC-CCCcccCCCCHHHHHHHH---Hhc---cCCc
Q 015894 98 VKIVEVGP---RDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFV-SPKWVPQLADAKDVMAAI---QNV---EGAR 167 (398)
Q Consensus 98 I~i~D~TL---RDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~-~~~~~p~~~D~~~v~~~i---~~~---~~~~ 167 (398)
+-|+.+|+ -||++ .++.+..++.++.+.+.|.+.|++|.-. .|...+ ....+|+.+.+ +.+ .++.
T Consensus 43 MgilNvTPDSFsdgg~----~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~-v~~~eE~~RvvpvI~~l~~~~~vp 117 (297)
T 1tx2_A 43 MGILNVTPDSFSDGGS----YNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAK-VSVEEEIKRVVPMIQAVSKEVKLP 117 (297)
T ss_dssp EEECCCCCCTTCSSCB----HHHHHHHHHHHHHHHHTTCSEEEEESCC----CCC-CCHHHHHHHHHHHHHHHHHHSCSC
T ss_pred EEEEeCCCCccccCCc----cCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCC-CCHHHHHHHHHHHHHHHHhcCCce
Confidence 45666666 44443 4567888999999999999999999643 233222 11223333333 322 2666
Q ss_pred EEEEeCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCC-
Q 015894 168 FPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVP- 246 (398)
Q Consensus 168 l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~- 246 (398)
++.=+.+.+-+++|+++|++.|.= +|.. +. ..++.+.+++.|..+. ++..-|.|. + .+
T Consensus 118 iSIDT~~~~V~~aAl~aGa~iINd---vsg~------~~--------d~~m~~~aa~~g~~vV--lmh~~G~p~-y-~d~ 176 (297)
T 1tx2_A 118 ISIDTYKAEVAKQAIEAGAHIIND---IWGA------KA--------EPKIAEVAAHYDVPII--LMHNRDNMN-Y-RNL 176 (297)
T ss_dssp EEEECSCHHHHHHHHHHTCCEEEE---TTTT------SS--------CTHHHHHHHHHTCCEE--EECCCSCCC-C-SSH
T ss_pred EEEeCCCHHHHHHHHHcCCCEEEE---CCCC------CC--------CHHHHHHHHHhCCcEE--EEeCCCCCC-c-chH
Confidence 777677888899999999998743 2210 00 1244566778887765 443323332 1 01
Q ss_pred ----HHHHHHHHHHHHhCCCC--EEEEccCcCc-CCHHHHHHHHHHHHhhC-CCCeEEEEeC--------------Cccc
Q 015894 247 ----PSKVAYVSKQLYDMGCS--EISLGDTIGV-GTPGTVIPMLEAVLDAV-PVDKLAVHFH--------------DTYG 304 (398)
Q Consensus 247 ----~~~l~~~a~~l~~~Gad--~I~L~DT~G~-~~P~~v~~lv~~l~~~~-p~~~l~~H~H--------------nd~G 304 (398)
.+++.+.++.+.++|++ .|.|==-+|. -+.++-.++++.++..- .+.|+-+=.. +...
T Consensus 177 v~ev~~~l~~~i~~a~~~GI~~~~IilDPg~Gfgk~~~~n~~ll~~l~~l~~lg~Pvl~G~Srksfig~~~g~~~~~r~~ 256 (297)
T 1tx2_A 177 MADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLE 256 (297)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCBEEECTTCHHHHHHHTCCGGGCHH
T ss_pred HHHHHHHHHHHHHHHHHcCCChhcEEEeCCCCcCCCHHHHHHHHHHHHHHHhCCCCEEEEeccchhhhhhcCCCHHHhHH
Confidence 25677778888899987 4544322222 23455556666665321 1233333222 2223
Q ss_pred hHHHHHHHHHHhCCCEEee
Q 015894 305 QALSNILASLQMGISTVDS 323 (398)
Q Consensus 305 lA~ANalaAl~aGa~~VD~ 323 (398)
-.++.+..|+..|+++|.+
T Consensus 257 ~t~a~~~~a~~~ga~Ivrv 275 (297)
T 1tx2_A 257 GTGATVCLGIEKGCEFVRV 275 (297)
T ss_dssp HHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHCCCcEEEe
Confidence 3345666677888998876
No 64
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=96.46 E-value=0.12 Score=48.33 Aligned_cols=192 Identities=18% Similarity=0.168 Sum_probs=120.8
Q ss_pred EEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--C---C
Q 015894 100 IVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--P---N 174 (398)
Q Consensus 100 i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~---n 174 (398)
++|-|+ .+-.-+.++..++++...+.|+..+-+ +|.|+| ... .++ -.++++...+ | +
T Consensus 16 ~IDhTl------L~p~~t~~~i~~lc~eA~~~~~~aVcV----~p~~v~------~a~-~l~-~~~v~v~tVigFP~G~~ 77 (231)
T 3ndo_A 16 LVDHTL------LKPEATPSDVTALVDEAADLGVFAVCV----SPPLVS------VAA-GVA-PSGLAIAAVAGFPSGKH 77 (231)
T ss_dssp TEEEEC------CCTTCCHHHHHHHHHHHHHHTCSEEEE----CGGGHH------HHH-HHC-CTTCEEEEEESTTTCCS
T ss_pred hcCccc------CCCCCCHHHHHHHHHHHHHhCCcEEEE----CHHHHH------HHH-Hhc-CCCCeEEEEecCCCCCC
Confidence 466666 122567888889999999999998887 344443 112 222 1345665544 2 1
Q ss_pred -----HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHH
Q 015894 175 -----LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSK 249 (398)
Q Consensus 175 -----~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~ 249 (398)
....+.|++.|+++|.+.+...... .-+.+...+.+..+++.+. |..+- +....+ ......+++.
T Consensus 78 ~~~~K~~E~~~Ai~~GAdEIDmVinig~lk-----~g~~~~v~~ei~~v~~a~~--~~~lK--vIiEt~-~L~~~~t~ee 147 (231)
T 3ndo_A 78 VPGIKATEAELAVAAGATEIDMVIDVGAAL-----AGDLDAVSADITAVRKAVR--AATLK--VIVESA-ALLEFSGEPL 147 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHTT--TSEEE--EECCHH-HHHHHTCHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEeehHhhh-----cccHHHHHHHHHHHHHHcc--CCceE--EEEECc-ccCCCCCHHH
Confidence 1356789999999999988754321 2356778888888887774 44443 222221 1100127888
Q ss_pred HHHHHHHHHhCCCCEEEEcc--C-cCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 250 VAYVSKQLYDMGCSEISLGD--T-IGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 250 l~~~a~~l~~~Gad~I~L~D--T-~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
+...++.+.++|+|.|--.- + .|..++++++.+-+.+... +.+..-=-.- -...+++-+++||++|-+|.
T Consensus 148 i~~a~~ia~~aGADfVKTSTGf~~~~gAt~edv~lm~~~v~~~-----v~VKaaGGIr-t~~~a~~~i~aGa~RiGtS~ 220 (231)
T 3ndo_A 148 LADVCRVARDAGADFVKTSTGFHPSGGASVQAVEIMARTVGER-----LGVKASGGIR-TAEQAAAMLDAGATRLGLSG 220 (231)
T ss_dssp HHHHHHHHHHTTCSEEECCCSCCTTCSCCHHHHHHHHHHHTTT-----SEEEEESSCC-SHHHHHHHHHTTCSEEEESS
T ss_pred HHHHHHHHHHHCcCEEEcCCCCCCCCCCCHHHHHHHHHHhCCC-----ceEEEeCCCC-CHHHHHHHHHhcchhcccch
Confidence 99999999999999886553 2 4677888887766665432 3332211111 12677888899999987763
No 65
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=96.43 E-value=0.27 Score=47.45 Aligned_cols=202 Identities=16% Similarity=0.178 Sum_probs=112.9
Q ss_pred cEEEeCCC---cccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCC-CCCcccCCCCHHHHHHHH---Hhcc--CCcE
Q 015894 98 VKIVEVGP---RDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFV-SPKWVPQLADAKDVMAAI---QNVE--GARF 168 (398)
Q Consensus 98 I~i~D~TL---RDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~-~~~~~p~~~D~~~v~~~i---~~~~--~~~l 168 (398)
+-|+-+|+ =||++ .++.+..++.+..+.+.|.+.|++|.-. .|..-| ....+|+.+.+ +.+. ++.+
T Consensus 26 MgilNvTPDSFsdgg~----~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~-v~~~eE~~Rv~pvi~~l~~~~vpi 100 (294)
T 2y5s_A 26 MGILNATPDSFSDGGR----FLARDDALRRAERMIAEGADLLDIGGESTRPGAPP-VPLDEELARVIPLVEALRPLNVPL 100 (294)
T ss_dssp EEEEECCC--------------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCC-CCHHHHHHHHHHHHHHHGGGCSCE
T ss_pred EEEEeCCCCCCCCCCC----cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCC-CCHHHHHHHHHHHHHHHhhCCCeE
Confidence 45666666 45554 3677888999999999999999999733 232211 21223333333 3333 5666
Q ss_pred EEEeCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCC-----
Q 015894 169 PVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEG----- 243 (398)
Q Consensus 169 ~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~----- 243 (398)
+.=+.+.+-+++|+++|++.|.=....+ ..++.+.++++|..+. ++..-|.|..-
T Consensus 101 SIDT~~~~Va~aAl~aGa~iINdVsg~~------------------d~~m~~~~a~~~~~vV--lmh~~G~p~tm~~~~~ 160 (294)
T 2y5s_A 101 SIDTYKPAVMRAALAAGADLINDIWGFR------------------QPGAIDAVRDGNSGLC--AMHMLGEPQTMQVGEP 160 (294)
T ss_dssp EEECCCHHHHHHHHHHTCSEEEETTTTC------------------STTHHHHHSSSSCEEE--EECCCEETTTTEECCC
T ss_pred EEECCCHHHHHHHHHcCCCEEEECCCCC------------------chHHHHHHHHhCCCEE--EECCCCCCccccccCC
Confidence 6666788889999999998775322111 1244567788888765 45443333321
Q ss_pred CC-C-----HHHHHHHHHHHHhCCCC--EEEEccCcCcC-CH-HHHHHHHHHHHhh------CCCCeEEEEeCC------
Q 015894 244 MV-P-----PSKVAYVSKQLYDMGCS--EISLGDTIGVG-TP-GTVIPMLEAVLDA------VPVDKLAVHFHD------ 301 (398)
Q Consensus 244 r~-~-----~~~l~~~a~~l~~~Gad--~I~L~DT~G~~-~P-~~v~~lv~~l~~~------~p~~~l~~H~Hn------ 301 (398)
.+ + .+++.+.++.+.++|++ .|.|==-+|.. ++ ++-.++++.+.+- .++.|+-+=.-|
T Consensus 161 ~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG~Gf~kt~~~~n~~ll~~l~~l~~~~~~~~g~Pvl~G~Srksfig~ 240 (294)
T 2y5s_A 161 DYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGA 240 (294)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSSCTTHHHHHHHHTGGGGSCBCTTSSBCCBEEECTTCHHHHT
T ss_pred ccccHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCcccccchHHHHHHHHHHHHHHhccccCCCCCEEEEecccHHhhh
Confidence 11 1 45677778888899986 45443222221 34 5566666666542 233333332211
Q ss_pred ----c-----cchHHHHHHHHHHhCCCEEeec
Q 015894 302 ----T-----YGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 302 ----d-----~GlA~ANalaAl~aGa~~VD~S 324 (398)
+ ...-.+-+..|+..|+++|.+.
T Consensus 241 l~g~~~~~~R~~~t~a~~~~a~~~Ga~IvrvH 272 (294)
T 2y5s_A 241 VIGGKPPLERVAASVAAALCAVERGAAIVRVH 272 (294)
T ss_dssp TTTSCCGGGCHHHHHHHHHHHHHTTCSEEEES
T ss_pred hcCCCchhhhhHHHHHHHHHHHHcCCcEEEcC
Confidence 1 1233555566778888877653
No 66
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=96.39 E-value=0.09 Score=51.39 Aligned_cols=200 Identities=17% Similarity=0.145 Sum_probs=99.5
Q ss_pred cEEEeCCC---cccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCC-CCcccCCCCHHHHHHH---HHhc----cCC
Q 015894 98 VKIVEVGP---RDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVS-PKWVPQLADAKDVMAA---IQNV----EGA 166 (398)
Q Consensus 98 I~i~D~TL---RDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~-~~~~p~~~D~~~v~~~---i~~~----~~~ 166 (398)
+-|+.+|. =||++. ++.+..++.++.+.+.|.+.|++|.-.. |. +.....+|+.+. ++.+ +++
T Consensus 45 MGIlNvTPDSFsdgg~~----~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG--~~v~~~eEl~Rv~pvI~~l~~~~~~v 118 (318)
T 2vp8_A 45 MAIVNRTPDSFYDKGAT----FSDAAARDAVHRAVADGADVIDVGGVKAGPG--ERVDVDTEITRLVPFIEWLRGAYPDQ 118 (318)
T ss_dssp EEEEC------------------CHHHHHHHHHHHHTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHSTTC
T ss_pred EEEEeCCCCcccCCCcc----CCHHHHHHHHHHHHHCCCCEEEECCCcCCCC--CCCCHHHHHHHHHHHHHHHHhhCCCC
Confidence 44566655 566654 5778889999999999999999996432 32 112223333333 3322 366
Q ss_pred cEEEEeCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-CCCC--
Q 015894 167 RFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGC-PVEG-- 243 (398)
Q Consensus 167 ~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~-~~~~-- 243 (398)
.++.=+.+.+-+++|+++|++.|.=..... ..++.+.++++|..+. ++..-|. |..-
T Consensus 119 pISIDT~~~~VaeaAl~aGa~iINDVsg~~------------------d~~m~~vaa~~g~~vV--lmh~~G~~p~tmq~ 178 (318)
T 2vp8_A 119 LISVDTWRAQVAKAACAAGADLINDTWGGV------------------DPAMPEVAAEFGAGLV--CAHTGGALPRTRPF 178 (318)
T ss_dssp EEEEECSCHHHHHHHHHHTCCEEEETTSSS------------------STTHHHHHHHHTCEEE--EECC----------
T ss_pred eEEEeCCCHHHHHHHHHhCCCEEEECCCCC------------------chHHHHHHHHhCCCEE--EECCCCCCcccccc
Confidence 666666788889999999999665322111 1244566778887764 4543333 3210
Q ss_pred C--CC----------HHHHHHHHHHHHhCCCC--EEEEccCcCcC-CHHHHHHHHHHHHhh----CCCC----eEEE---
Q 015894 244 M--VP----------PSKVAYVSKQLYDMGCS--EISLGDTIGVG-TPGTVIPMLEAVLDA----VPVD----KLAV--- 297 (398)
Q Consensus 244 r--~~----------~~~l~~~a~~l~~~Gad--~I~L~DT~G~~-~P~~v~~lv~~l~~~----~p~~----~l~~--- 297 (398)
+ |. .+++.+.++.+.++|++ .|.|==-+|.. +.++-.++++.+.+- +|.+ +..|
T Consensus 179 ~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~IilDPG~GF~Kt~~~nl~ll~~l~~l~~lg~PvL~G~SrKsfig~ 258 (318)
T 2vp8_A 179 RVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNKDVVGE 258 (318)
T ss_dssp ---CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTTTCCTTSHHHHHHHHTHHHHHTTSSCBEECCC-------
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEEcCCCCcccCHHHHHHHHHHHHHHHhCCCCEEEEeCcchhhhh
Confidence 1 10 15666677888899986 45442222322 345556666665532 2311 0111
Q ss_pred ----EeCCccchHHHHHHHHHHhCCCEEee
Q 015894 298 ----HFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 298 ----H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
-..+-..-.++.+..|+..|+++|.+
T Consensus 259 ~~g~~~~~r~~~t~a~~~~a~~~Ga~IvRv 288 (318)
T 2vp8_A 259 TLGVDLTERLEGTLAATALAAAAGARMFRV 288 (318)
T ss_dssp --------CHHHHHHHHHHHHHTTCCEEEE
T ss_pred hcCCChHHhHHHHHHHHHHHHHCCCeEEEc
Confidence 11222333344556667777777754
No 67
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=96.39 E-value=0.059 Score=52.49 Aligned_cols=142 Identities=15% Similarity=0.116 Sum_probs=90.8
Q ss_pred ccEEEeCCCc---cc--CCCCCCCCCH-HHHHHHHHHHHhcCCCEEEEecC-CCCCcccCCCCHHHHHHHHHhc---cCC
Q 015894 97 FVKIVEVGPR---DG--LQNEKNIVPA-VVKVELIKLLVSSGLAVVEATSF-VSPKWVPQLADAKDVMAAIQNV---EGA 166 (398)
Q Consensus 97 ~I~i~D~TLR---DG--~Q~~~~~~~~-~~k~~ia~~L~~aGv~~IEvG~~-~~~~~~p~~~D~~~v~~~i~~~---~~~ 166 (398)
-+-|+|+|.= || .+. .+. +..++.++.+.+.|.+.|++|.- ..|...+ .+.++..+.++.+ .++
T Consensus 50 ~m~I~n~tpdsf~d~i~~~~----~~~~~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~--vs~eee~~vV~~v~~~~~v 123 (310)
T 2h9a_B 50 ALEVFDTPPTDWPDILVEPF----KDVINDPVAWAKKCVEYGADIVALRLVSAHPDGQN--RSGAELAEVCKAVADAIDV 123 (310)
T ss_dssp EEEEESSCCSSCCHHHHGGG----TTTTTCHHHHHHHHHHTTCSEEEEECGGGCTTTTC--CCHHHHHHHHHHHHHHCSS
T ss_pred EEEEeeCCCcccchhhhhhh----ccHHHHHHHHHHHHHHcCCcEEEEeCccCCCCCCC--CCHHHHHHHHHHHHHhCCc
Confidence 3568898874 66 333 222 56778888899999999999974 3343222 3455556555533 356
Q ss_pred cEEE-Ee----CCHhhHHHHHHcCCC---EEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeec
Q 015894 167 RFPV-LT----PNLKGFEAAVAAGAK---EVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVG 238 (398)
Q Consensus 167 ~l~~-l~----~n~~~ie~a~~~Gv~---~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg 238 (398)
.++. =+ .+.+-+++++++|.+ .|. ++|. .+..++...|+++|..+. ++.
T Consensus 124 plsI~DT~~~~~~~~V~eaal~aga~~k~iIN---dvs~---------------~~~~~~~~~aa~~g~~vv--~m~--- 180 (310)
T 2h9a_B 124 PLMIIGCGVEEKDAEIFPVIGEALSGRNCLLS---SATK---------------DNYKPIVATCMVHGHSVV--ASA--- 180 (310)
T ss_dssp CEEEECCSCHHHHHHHHHHHHHHTTTSCCEEE---EECT---------------TTHHHHHHHHHHHTCEEE--EEC---
T ss_pred eEEEECCCCCCCCHHHHHHHHHhCCCCCCEEE---ECCC---------------CccHHHHHHHHHhCCCEE--EEC---
Confidence 6666 34 334567899999987 443 2221 013455677788898765 231
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCC--CEEEEccCcC
Q 015894 239 CPVEGMVPPSKVAYVSKQLYDMGC--SEISLGDTIG 272 (398)
Q Consensus 239 ~~~~~r~~~~~l~~~a~~l~~~Ga--d~I~L~DT~G 272 (398)
+ -+.+++.+..+.+.++|+ +.|.|==.+|
T Consensus 181 -~----~dv~~l~~~~~~a~~~Gi~~e~IilDPg~g 211 (310)
T 2h9a_B 181 -P----LDINLSKQLNIMIMEMNLAPNRIIMDPLIG 211 (310)
T ss_dssp -S----SCHHHHHHHHHHHHTTTCCGGGEEEECCCC
T ss_pred -h----hHHHHHHHHHHHHHHCCCChhhEEEeCCCc
Confidence 1 157889999999999998 5676655555
No 68
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=96.39 E-value=0.056 Score=52.54 Aligned_cols=191 Identities=17% Similarity=0.158 Sum_probs=125.9
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHH---hc-cCCcEEEEe---CCHhhHHHHHHcCCC
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ---NV-EGARFPVLT---PNLKGFEAAVAAGAK 187 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~---~~-~~~~l~~l~---~n~~~ie~a~~~Gv~ 187 (398)
....+....++++-.+.+-+.|=-.+...-++. ..+.+...++ +. .++.+.... .+.+.+..|+++|..
T Consensus 24 v~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~----g~~~~~~~v~~aa~~~~~VPValHLDHg~~~e~~~~ai~~GFt 99 (307)
T 3n9r_A 24 FVNFEMLNAIFEAGNEENSPLFIQASEGAIKYM----GIDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFT 99 (307)
T ss_dssp CSSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHH----CHHHHHHHHHHHHHHSTTSCEEEEEEEECSHHHHHHHHHHTCS
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEEcChhhhhhC----CHHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHhCCC
Confidence 467888888999999999997765543211111 1222222332 21 345544433 467889999999998
Q ss_pred EEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC--------CCCCHHHHHHHHHHHHh
Q 015894 188 EVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE--------GMVPPSKVAYVSKQLYD 259 (398)
Q Consensus 188 ~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~--------~r~~~~~l~~~a~~l~~ 259 (398)
.|.+=.| . .+.+|+++.-++++++|++.|+.|++.|-..-|.++. ..++|+...++++ +
T Consensus 100 SVMiDgS--~--------~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~---~ 166 (307)
T 3n9r_A 100 SVMIDAS--H--------HAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVK---E 166 (307)
T ss_dssp EEEECCT--T--------SCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHH---H
T ss_pred cEEEECC--C--------CCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHH---H
Confidence 8877322 1 2578999999999999999999999888765454432 2478998888765 4
Q ss_pred CCCCEEEEc--cCcCcC----CHHHHHHHHHHHHhhCCCCeEEEEe-------------------CCccchHHHHHHHHH
Q 015894 260 MGCSEISLG--DTIGVG----TPGTVIPMLEAVLDAVPVDKLAVHF-------------------HDTYGQALSNILASL 314 (398)
Q Consensus 260 ~Gad~I~L~--DT~G~~----~P~~v~~lv~~l~~~~p~~~l~~H~-------------------Hnd~GlA~ANalaAl 314 (398)
.|+|.+.++ -.=|.- .|.==.++++.+++ .+++||.+|+ +++.|........|+
T Consensus 167 TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~-~~~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p~e~i~~ai 245 (307)
T 3n9r_A 167 SQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKR-LTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESV 245 (307)
T ss_dssp HCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHH-HHCSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHH
T ss_pred HCCCEEEEecCCcccccCCCCCCccCHHHHHHHHh-cCCCCeEEeCCCCcchHHHHHHHHhcCccCCCCCCCHHHHHHHH
Confidence 699975443 333332 23212233444443 4457899997 447799999999999
Q ss_pred HhCCCEEee
Q 015894 315 QMGISTVDS 323 (398)
Q Consensus 315 ~aGa~~VD~ 323 (398)
+.|+.-|+.
T Consensus 246 ~~GV~KiNi 254 (307)
T 3n9r_A 246 KGGINKVNT 254 (307)
T ss_dssp HTTEEEEEE
T ss_pred HcCceEEEe
Confidence 999886654
No 69
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=96.38 E-value=0.72 Score=43.94 Aligned_cols=221 Identities=12% Similarity=0.057 Sum_probs=137.6
Q ss_pred ccEEEeCCCcccCCCCCC---CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHH---HHhc-cCCcEE
Q 015894 97 FVKIVEVGPRDGLQNEKN---IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAA---IQNV-EGARFP 169 (398)
Q Consensus 97 ~I~i~D~TLRDG~Q~~~~---~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~---i~~~-~~~~l~ 169 (398)
.|+|-++++-+|.-.--. .-+.++.+..++.+...|.|.||+-...-.. ..+.+++.+. +|+. .+..+.
T Consensus 27 ~v~v~~~~~g~g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~----~~~~~~v~~~l~~lr~~~~~~PiI 102 (276)
T 3o1n_A 27 TVTVRDLVVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFAN----VTTAESVLEAAGAIREIITDKPLL 102 (276)
T ss_dssp CEEETTEEETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTT----TTCHHHHHHHHHHHHHHCCSSCEE
T ss_pred EEEECCEEeCCCCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccc----cCcHHHHHHHHHHHHHhcCCCCEE
Confidence 477777777776433221 2245566667777778999999996532211 1233444444 4432 345544
Q ss_pred EEeCCH-h-------------hHHHHHHcC-CCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEe
Q 015894 170 VLTPNL-K-------------GFEAAVAAG-AKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLS 234 (398)
Q Consensus 170 ~l~~n~-~-------------~ie~a~~~G-v~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~ 234 (398)
.-+|.. + =++.+++.| ++.|.|-....+ +.+.++++.|++.|.++-+..=
T Consensus 103 ~T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~---------------~~~~~l~~~a~~~~~kvI~S~H 167 (276)
T 3o1n_A 103 FTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGD---------------DEVKATVGYAHQHNVAVIMSNH 167 (276)
T ss_dssp EECCBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGGCH---------------HHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcCCH---------------HHHHHHHHHHHhCCCEEEEEee
Confidence 444421 1 145677889 899999665332 2345667888888888753322
Q ss_pred eeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHh---hCCCCeEEEEeCCccchHHHHHH
Q 015894 235 CVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLD---AVPVDKLAVHFHDTYGQALSNIL 311 (398)
Q Consensus 235 ~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~---~~p~~~l~~H~Hnd~GlA~ANal 311 (398)
. | ....+.+.+....+++.++|||.+-|+=+. -++.++.+++....+ .++..|+-.-. .-.++.-.-+
T Consensus 168 d-f----~~tP~~~el~~~~~~~~~~GaDIvKia~~a--~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~--MG~~G~~SRi 238 (276)
T 3o1n_A 168 D-F----HKTPAAEEIVQRLRKMQELGADIPKIAVMP--QTKADVLTLLTATVEMQERYADRPIITMS--MSKTGVISRL 238 (276)
T ss_dssp E-S----SCCCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHTCCSCCEEEE--CSGGGTHHHH
T ss_pred c-C----CCCcCHHHHHHHHHHHHHcCCCEEEEEecC--CChHHHHHHHHHHHHHHhcCCCCCEEEEE--CCCchhhHHH
Confidence 1 2 122345788899999999999999888553 467788887776543 24544554432 3334445556
Q ss_pred HHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q 015894 312 ASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNG 352 (398)
Q Consensus 312 aAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~ 352 (398)
.+-..|-...-+++ |+ |- ..|+.+++++-..|+.
T Consensus 239 ~~~~~GS~vTf~~l---~~-~s---APGQl~~~~l~~~l~~ 272 (276)
T 3o1n_A 239 AGEVFGSAATFGAV---KK-AS---APGAISVADLRTVLTI 272 (276)
T ss_dssp CHHHHTCCEEECBS---SC-CS---STTCCBHHHHHHHHHH
T ss_pred HHHHhCCceEecCC---CC-CC---CCCCCCHHHHHHHHHH
Confidence 66677988888887 33 33 4669999999887764
No 70
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.37 E-value=0.41 Score=46.27 Aligned_cols=235 Identities=12% Similarity=0.131 Sum_probs=128.1
Q ss_pred EeCC----CcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCH-HHHHHHHHhc------cCCcEE
Q 015894 101 VEVG----PRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADA-KDVMAAIQNV------EGARFP 169 (398)
Q Consensus 101 ~D~T----LRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~-~~v~~~i~~~------~~~~l~ 169 (398)
+.+| ++||.+. .+.+..++.++.+.+.|.+.|++|....+ -|. +++.+.++.+ .++.++
T Consensus 19 iNvTg~~sf~~~~~~----~~~~~a~~~A~~~v~~GAdiIDIg~g~~~------v~~~eem~rvv~~i~~~~~~~~vpis 88 (300)
T 3k13_A 19 CNVAGSRKFLRLVNE----KKYDEALSIARQQVEDGALVIDVNMDDGL------LDARTEMTTFLNLIMSEPEIARVPVM 88 (300)
T ss_dssp EETTTCHHHHHHHHT----TCHHHHHHHHHHHHHTTCSEEEEECCCTT------SCHHHHHHHHHHHHHTCHHHHTSCEE
T ss_pred ccCCCCHHHHHHHhc----CCHHHHHHHHHHHHHCCCCEEEECCCCCC------CCHHHHHHHHHHHHHHhhhcCCCeEE
Confidence 4566 7777775 46789999999999999999999974322 233 3444444322 355555
Q ss_pred EEeCCHhhHHHHHH--cCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeee--ecCCCCCCC
Q 015894 170 VLTPNLKGFEAAVA--AGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCV--VGCPVEGMV 245 (398)
Q Consensus 170 ~l~~n~~~ie~a~~--~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~--fg~~~~~r~ 245 (398)
.=+.+.+-++++++ .|.+.|.=. +.. ..+ +++.++...++++|..+. ++.. -|.|.
T Consensus 89 IDT~~~~V~eaaL~~~~Ga~iINdI-s~~----------~~d---~~~~~~~~l~a~~ga~vV--~mh~d~~G~p~---- 148 (300)
T 3k13_A 89 IDSSKWEVIEAGLKCLQGKSIVNSI-SLK----------EGE---EVFLEHARIIKQYGAATV--VMAFDEKGQAD---- 148 (300)
T ss_dssp EECSCHHHHHHHHHHCSSCCEEEEE-CST----------TCH---HHHHHHHHHHHHHTCEEE--EESEETTEECC----
T ss_pred EeCCCHHHHHHHHHhcCCCCEEEeC-Ccc----------cCC---hhHHHHHHHHHHhCCeEE--EEeeCCCCCCC----
Confidence 55677788899998 798866432 111 011 233456777888898764 3332 12222
Q ss_pred CHHH----HHHHHHHH-HhCCC--CEEEEccC---cCcCCHH------HHHHHHHHHHhhCCCCeEEEEeCC-ccchH--
Q 015894 246 PPSK----VAYVSKQL-YDMGC--SEISLGDT---IGVGTPG------TVIPMLEAVLDAVPVDKLAVHFHD-TYGQA-- 306 (398)
Q Consensus 246 ~~~~----l~~~a~~l-~~~Ga--d~I~L~DT---~G~~~P~------~v~~lv~~l~~~~p~~~l~~H~Hn-d~GlA-- 306 (398)
+.+. ..++.+.+ .++|+ +.|.|==- +|..... ++-+-++.+++.+|+.|+-+=..| .+|+-
T Consensus 149 t~~~~~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~gk~~~~~~~~~~~~l~~l~~lk~~lPg~pvl~G~SnkSfglp~~ 228 (300)
T 3k13_A 149 TAARKIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVATGIEEHNNYAVDFIEATGWIRKNLPGAHVSGGVSNLSFSFRGN 228 (300)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCCGGGEEEECCCCCCSSSCGGGTTHHHHHHHHHHHHHHHSTTCEECCBGGGGGGGGTTC
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCccCCChHHhhHHHHHHHHHHHHHHHhCCCCCEEEEECcccccCCCC
Confidence 2333 33344443 67898 34554222 2332222 244445555667887666654444 24542
Q ss_pred --------HHHHHHHHHhCCC--EEeeccccCCCCCCCCCCCCCccHHHHHHHHHh-CCCCCccChHHHHHHHHHHHHHh
Q 015894 307 --------LSNILASLQMGIS--TVDSSVSGLGGCPYAKGASGNVATEDVVYMLNG-LGVRTNVDIRKLMIAGDFICKHL 375 (398)
Q Consensus 307 --------~ANalaAl~aGa~--~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~-~Gi~t~iDl~~L~~~~~~v~~~~ 375 (398)
-+-...|+++|.+ +||.+-..+=. ..+-|+.-..... ++.+. =..+.|.+.++.++...
T Consensus 229 ~~~R~~~n~~fl~~ai~~Gld~~Ivn~~~~~~~~---------~i~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~ 298 (300)
T 3k13_A 229 NYIREAMHAVFLYHAIQQGMDMGIVNPGTSVLYS---------DIPADTLEKIEDVVLNRRP-DAAERLIELAEALKETM 298 (300)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECCC-CCCGG---------GSCHHHHHHHHHHHTTCST-THHHHHHHHHHHHC---
T ss_pred cchhHHHHHHHHHHHHHcCCCEEecCcchhhHHh---------hcCHHHHHHHHHHHhCCCc-chHHHHHHHHHHHhhcc
Confidence 2234567899988 55655443322 3343432222221 33321 23578888777765543
No 71
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=96.34 E-value=0.42 Score=46.51 Aligned_cols=204 Identities=13% Similarity=0.117 Sum_probs=117.3
Q ss_pred CCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCC-CCCcc----cCCCCHHHHH---HHHHhc---
Q 015894 95 PGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFV-SPKWV----PQLADAKDVM---AAIQNV--- 163 (398)
Q Consensus 95 p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~-~~~~~----p~~~D~~~v~---~~i~~~--- 163 (398)
|.=+-|+-+|. |-..- ...+.+..++.++.+.+.|.+.|++|.-. .|... | ....+|+. ..++.+
T Consensus 28 ~~vMGIlNvTp-DSFsd--~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~-V~~~eE~~Rv~pvI~~l~~~ 103 (314)
T 3tr9_A 28 PAVMGIINVSP-NSFYH--PHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDS-PSTQIELDRLLPVIDAIKKR 103 (314)
T ss_dssp CEEEEEEECST-TCSBC--BCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----C-HHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEeCCC-Cchhh--ccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCC-CCHHHHHHHHHHHHHHHHhh
Confidence 33355777776 33332 35688999999999999999999999643 33211 1 11123322 222222
Q ss_pred cCCcEEEEeCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCC
Q 015894 164 EGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEG 243 (398)
Q Consensus 164 ~~~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~ 243 (398)
.++.++.=+.+.+-+++|+++|++.|.=..... ..++.+.+++.|..+. ++..-|.|..-
T Consensus 104 ~~vpISIDT~~~~Va~aAl~aGa~iINDVsg~~------------------~~~m~~v~a~~g~~vV--lMh~~G~P~tm 163 (314)
T 3tr9_A 104 FPQLISVDTSRPRVMREAVNTGADMINDQRALQ------------------LDDALTTVSALKTPVC--LMHFPSETRKP 163 (314)
T ss_dssp CCSEEEEECSCHHHHHHHHHHTCCEEEETTTTC------------------STTHHHHHHHHTCCEE--EECCCCTTCCT
T ss_pred CCCeEEEeCCCHHHHHHHHHcCCCEEEECCCCC------------------chHHHHHHHHhCCeEE--EECCCCCCccc
Confidence 355555556778888999999998775322111 1134566677887765 55444433221
Q ss_pred CCC---------HHHHHHHHHHHHhCCCC--EEEEccC-cC---c-CCHHHHHHHHHHHHhh-CCCCeEEE-E-------
Q 015894 244 MVP---------PSKVAYVSKQLYDMGCS--EISLGDT-IG---V-GTPGTVIPMLEAVLDA-VPVDKLAV-H------- 298 (398)
Q Consensus 244 r~~---------~~~l~~~a~~l~~~Gad--~I~L~DT-~G---~-~~P~~v~~lv~~l~~~-~p~~~l~~-H------- 298 (398)
... .+++.+.++.+.++|++ .|.| |- +| . -++.+-.++++.+..- ..+.|+-+ .
T Consensus 164 q~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~Iil-DPG~G~~~F~Kt~~~n~~lL~~l~~l~~lg~PvL~G~SRKsfig 242 (314)
T 3tr9_A 164 GSTTHFYFLQSVKKELQESIQRCKKAGISEDRIII-DPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVLSGWSRKSMIG 242 (314)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCCCSGGGCCCHHHHHHHHHTTHHHHTTSSCBEECCTTCHHHH
T ss_pred ccccccchHHHHHHHHHHHHHHHHHcCCCHhHEEE-eCCCCchhhcCCHHHHHHHHHHHHHHhcCCCCEEEEechhhhhh
Confidence 111 35666777888899986 4554 43 44 2 2456666666665432 12223322 1
Q ss_pred ------eCCccchHHHHHHHHHHhCCCEEee
Q 015894 299 ------FHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 299 ------~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
..+..+-.+|.+..|+..||++|-+
T Consensus 243 ~~~~~~~~~R~~~t~a~~~~a~~~Ga~IvRv 273 (314)
T 3tr9_A 243 DVLNQPPENRLFGSIAADVLAVYHGASIIRT 273 (314)
T ss_dssp HHHTCCGGGCHHHHHHHHHHHHHTTCSEEEE
T ss_pred hhcCCChHHhHHHHHHHHHHHHHcCCcEEEe
Confidence 2233444456677788899998754
No 72
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.32 E-value=0.094 Score=48.57 Aligned_cols=153 Identities=22% Similarity=0.240 Sum_probs=99.1
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHH-HhccCCcEEEE-eCCHhhHHHHHHcCCCEEEEec
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAI-QNVEGARFPVL-TPNLKGFEAAVAAGAKEVAIFA 193 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i-~~~~~~~l~~l-~~n~~~ie~a~~~Gv~~v~i~~ 193 (398)
.+.++-+++++.|.+.|++.||++.-. + +..+.++.+ ++.++..+.+= +-..++++.|+++|+|.|+.-
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k~-~-------~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p- 96 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFRS-E-------AAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTP- 96 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTS-T-------THHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECS-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccC-c-------hHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEEC-
Confidence 345566899999999999999999532 1 234455544 35665544321 225688999999999999542
Q ss_pred cCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCc
Q 015894 194 SASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGV 273 (398)
Q Consensus 194 ~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~ 273 (398)
-.+ .++++.++++|..+.. | -.+++++ .++.++|+|.|.+
T Consensus 97 -~~d------------------~~v~~~ar~~g~~~i~------G-----v~t~~e~----~~A~~~Gad~vk~------ 136 (224)
T 1vhc_A 97 -GLN------------------PKIVKLCQDLNFPITP------G-----VNNPMAI----EIALEMGISAVKF------ 136 (224)
T ss_dssp -SCC------------------HHHHHHHHHTTCCEEC------E-----ECSHHHH----HHHHHTTCCEEEE------
T ss_pred -CCC------------------HHHHHHHHHhCCCEEe------c-----cCCHHHH----HHHHHCCCCEEEE------
Confidence 111 3567888899987642 1 1245553 3466899999888
Q ss_pred CCHHH-H--HHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHh-CCCEEe
Q 015894 274 GTPGT-V--IPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQM-GISTVD 322 (398)
Q Consensus 274 ~~P~~-v--~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~a-Ga~~VD 322 (398)
.|.. + .++++.++..+|.+|+-. .=|.-..|+-.-+++ |+..|-
T Consensus 137 -Fpa~~~gG~~~lk~l~~~~~~ipvva----iGGI~~~N~~~~l~agga~~v~ 184 (224)
T 1vhc_A 137 -FPAEASGGVKMIKALLGPYAQLQIMP----TGGIGLHNIRDYLAIPNIVACG 184 (224)
T ss_dssp -TTTTTTTHHHHHHHHHTTTTTCEEEE----BSSCCTTTHHHHHTSTTBCCEE
T ss_pred -eeCccccCHHHHHHHHhhCCCCeEEE----ECCcCHHHHHHHHhcCCCEEEE
Confidence 3311 1 467888888787666643 234445677777887 666443
No 73
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=96.27 E-value=0.39 Score=44.56 Aligned_cols=179 Identities=13% Similarity=0.058 Sum_probs=113.7
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--C----C----HhhHHHHHHc
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--P----N----LKGFEAAVAA 184 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~----n----~~~ie~a~~~ 184 (398)
..+.++..++++...+.|+..+-+- |.|+| ...+.+.++++.+.+ | + ...++. ++.
T Consensus 13 ~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~---------~a~~~l~gv~v~tvigFP~G~~~~~~k~~E~~~-i~~ 78 (226)
T 1vcv_A 13 YLTVDEAVAGARKAEELGVAAYCVN----PIYAP---------VVRPLLRKVKLCVVADFPFGALPTASRIALVSR-LAE 78 (226)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEEC----GGGHH---------HHGGGCSSSEEEEEESTTTCCSCHHHHHHHHHH-HTT
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEC----HHHHH---------HHHHHhCCCeEEEEeCCCCCCCchHHHHHHHHH-HHC
Confidence 4578899999999999999998873 43332 111223346665554 2 1 135678 999
Q ss_pred CCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCE
Q 015894 185 GAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSE 264 (398)
Q Consensus 185 Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~ 264 (398)
|+++|.+.+..... ..-..+...+.+..+++.|.+.+++|- |. . ...+++.....++.+.++|+|.
T Consensus 79 GAdEID~Vinig~~-----~~g~~~~v~~ei~~v~~a~~~~~lKvI--lE--t-----~~Lt~eei~~a~~ia~eaGADf 144 (226)
T 1vcv_A 79 VADEIDVVAPIGLV-----KSRRWAEVRRDLISVVGAAGGRVVKVI--TE--E-----PYLRDEERYTLYDIIAEAGAHF 144 (226)
T ss_dssp TCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHTTTSEEEEE--CC--G-----GGCCHHHHHHHHHHHHHHTCSE
T ss_pred CCCEEEEecchhhh-----cCCCHHHHHHHHHHHHHHHcCCCceEE--Ee--c-----cCCCHHHHHHHHHHHHHcCCCE
Confidence 99999998875432 123567788888888887765444443 22 1 2235788999999999999998
Q ss_pred EEEc--cC----------cCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHh---CCC----EEeec
Q 015894 265 ISLG--DT----------IGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQM---GIS----TVDSS 324 (398)
Q Consensus 265 I~L~--DT----------~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~a---Ga~----~VD~S 324 (398)
|--. =+ .|..+|+++.-+-+.++..-+. +++..-=-.-. ...+++-+++ |++ +|-+|
T Consensus 145 VKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~--v~vKaaGGirt-~~~al~~i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 145 IKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYR--LGVKMAGGIRT-REQAKAIVDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp EECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCC--CEEEEESSCCS-HHHHHHHHHHHCSCSCTTTEEEEES
T ss_pred EEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCC--ceEEEeCCCCC-HHHHHHHHHHHHCCCCcCCceEecC
Confidence 8765 23 4678888987666655543232 33322111111 3445555555 999 88766
No 74
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=96.25 E-value=0.15 Score=48.25 Aligned_cols=170 Identities=11% Similarity=0.074 Sum_probs=100.1
Q ss_pred CcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc---cCCcEEEEeCCHhhHHHH
Q 015894 105 PRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV---EGARFPVLTPNLKGFEAA 181 (398)
Q Consensus 105 LRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~---~~~~l~~l~~n~~~ie~a 181 (398)
+.||.+. .+.+..++.++.+.+.|.+.|++|....+ ....+++.+.++.+ .++.++.=+.+.+-+++|
T Consensus 15 Fsdgg~~----~~~~~a~~~a~~~v~~GAdiIDIg~g~~~-----v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aA 85 (262)
T 1f6y_A 15 IKRAIQE----RDPAPVQEWARRQEEGGARALDLNVGPAV-----QDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAG 85 (262)
T ss_dssp HHHHHHH----TCHHHHHHHHHHHHHHTCSEEEEBCC---------CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH
T ss_pred HHHhhhc----CCHHHHHHHHHHHHHCCCcEEEECCCCCC-----CChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHH
Confidence 5667654 57888899999999999999999974322 12344555555533 355555556777888999
Q ss_pred HHc--CCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeee--ecCCCCCCCCHHHHHHHHHHH
Q 015894 182 VAA--GAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCV--VGCPVEGMVPPSKVAYVSKQL 257 (398)
Q Consensus 182 ~~~--Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~--fg~~~~~r~~~~~l~~~a~~l 257 (398)
+++ |++.|.=.... + +.+.++...++++|..+. ++.. -|.|....-.++++.+.++.+
T Consensus 86 l~a~~Ga~iINdvs~~-------------~---d~~~~~~~~~a~~~~~vv--lmh~~~~G~p~t~~~~~~~~~~~~~~a 147 (262)
T 1f6y_A 86 LKKCKNRAMINSTNAE-------------R---EKVEKLFPLAVEHGAALI--GLTMNKTGIPKDSDTRLAFAMELVAAA 147 (262)
T ss_dssp HHHCSSCEEEEEECSC-------------H---HHHHHHHHHHHHTTCEEE--EESCCSSCSCSSHHHHHHHHHHHHHHH
T ss_pred HhhCCCCCEEEECCCC-------------c---ccHHHHHHHHHHhCCcEE--EEcCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 998 98777522110 1 334456777888998654 4432 122211111135666777788
Q ss_pred HhCCCC--EEEEccCcC---cCC--HHHHHHHHHHHHhhC-CCCeEEEEeCC
Q 015894 258 YDMGCS--EISLGDTIG---VGT--PGTVIPMLEAVLDAV-PVDKLAVHFHD 301 (398)
Q Consensus 258 ~~~Gad--~I~L~DT~G---~~~--P~~v~~lv~~l~~~~-p~~~l~~H~Hn 301 (398)
.++|++ .|.|==.+| ... ..++-+.+..+++.+ |+.|+-+=.+|
T Consensus 148 ~~~Gi~~~~IilDPg~g~~g~~~~~~~~~l~~l~~l~~~~~pg~pvl~G~Sr 199 (262)
T 1f6y_A 148 DEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSN 199 (262)
T ss_dssp HHHTCCGGGEEEECCCCCTTTCTTHHHHHHHHHHHHHTCCSSCCEEEEEGGG
T ss_pred HHCCCCcccEEEeCCCCcCCCChHHHHHHHHHHHHHHHHhCCCCCEEEeecC
Confidence 889985 454432333 211 234444555666556 66676664444
No 75
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=96.24 E-value=0.64 Score=43.12 Aligned_cols=226 Identities=10% Similarity=-0.016 Sum_probs=121.2
Q ss_pred CCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeC
Q 015894 94 VPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTP 173 (398)
Q Consensus 94 ~p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~ 173 (398)
|+-++-+...++++ .+ -.+.++.+.++|++.||+.....+ .+.+++.+.+++ .++++.++..
T Consensus 24 m~mklg~~~~~~~~--------~~---~~~~l~~~~~~G~~~vEl~~~~~~------~~~~~~~~~l~~-~gl~v~~~~~ 85 (287)
T 3kws_A 24 LELKLSFQEGIAPG--------ES---LNEKLDFMEKLGVVGFEPGGGGLA------GRVNEIKQALNG-RNIKVSAICA 85 (287)
T ss_dssp CCCEEEEETTSSCC--------SS---HHHHHHHHHHTTCCEEECBSTTCG------GGHHHHHHHHTT-SSCEECEEEC
T ss_pred ceeeEEEEecccCC--------CC---HHHHHHHHHHcCCCEEEecCCchH------HHHHHHHHHHHH-cCCeEEEEec
Confidence 44456677777765 12 346777888999999999865211 245555555542 3455544321
Q ss_pred ---------CH-----------hhHHHHHHcCCCEEEEeccCchHHHhh--hcCCCHHHHHHHHHHHHHHHHhCCCcEEE
Q 015894 174 ---------NL-----------KGFEAAVAAGAKEVAIFASASESFSKS--NINCTIEDSLIRYRDVALAARELSIPVRG 231 (398)
Q Consensus 174 ---------n~-----------~~ie~a~~~Gv~~v~i~~~~Sd~~~~~--~~~~s~~~~l~~~~~~v~~ak~~G~~v~~ 231 (398)
+. +.++.|.+.|++.|.+...... +... ......+...+.+.++.++|++.|+.+..
T Consensus 86 ~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~-~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 164 (287)
T 3kws_A 86 GFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNG-QVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIF 164 (287)
T ss_dssp CCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTT-CCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCC-cCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 11 1245677889999887533111 0000 00012345667777888999999987652
Q ss_pred EEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEE-EccCcCcCC-HHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHH
Q 015894 232 YLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEIS-LGDTIGVGT-PGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSN 309 (398)
Q Consensus 232 ~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~-L~DT~G~~~-P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~AN 309 (398)
.-...+ +...-.+++.+.++++.+ +.+.+. .-||.=... -.+..+.++.+. + --.++|++|..+
T Consensus 165 E~~~~~--~~~~~~~~~~~~~ll~~v---~~~~vg~~~D~~h~~~~g~d~~~~l~~~~---~-~i~~vHlkD~~~----- 230 (287)
T 3kws_A 165 EPLNRK--ECFYLRQVADAASLCRDI---NNPGVRCMGDFWHMTWEETSDMGAFISGG---E-YLQHVHVASRKR----- 230 (287)
T ss_dssp CCCCTT--TCSSCCCHHHHHHHHHHH---CCTTEEEEEEHHHHHHHCSCHHHHHHHHG---G-GEEEEEECCTTT-----
T ss_pred EecCcc--cCcccCCHHHHHHHHHHc---CCCCeeEEeehHHHHhcCCCHHHHHHHhh---h-hEEEEEeCCCCC-----
Confidence 111000 011123566666666543 433232 335421110 012223333332 2 247899999751
Q ss_pred HHHHHHhCCCEEeeccccCCCCCCCCCCCCC--ccHHHHHHHHHhCCCCCcc--------C-hHHHHHHHHHHHHHh
Q 015894 310 ILASLQMGISTVDSSVSGLGGCPYAKGASGN--VATEDVVYMLNGLGVRTNV--------D-IRKLMIAGDFICKHL 375 (398)
Q Consensus 310 alaAl~aGa~~VD~Sv~GlGecp~a~graGN--a~lE~vv~~L~~~Gi~t~i--------D-l~~L~~~~~~v~~~~ 375 (398)
.+ .+ +.|+ .+...++..|++.|++-.+ | .+.+....+++.+.+
T Consensus 231 --------------------r~--~p-G~G~d~id~~~i~~~L~~~gy~g~i~lE~~~~~~~~~~~~~s~~~l~~~~ 284 (287)
T 3kws_A 231 --------------------RS--MP-GEDGDADNYINGFKGLKMIGYNNYVSFECGCQGDRNVVVPAAVKLLREQW 284 (287)
T ss_dssp --------------------SC--ST-TTTGGGCCCHHHHHHHHHTTCCSEEEECCCCSSCHHHHHHHHHHHHHHHH
T ss_pred --------------------CC--CC-CCCCCCcCHHHHHHHHHHcCCCccEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 11 12 3788 9999999999987764211 1 245555556665543
No 76
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.19 E-value=0.15 Score=46.82 Aligned_cols=152 Identities=21% Similarity=0.184 Sum_probs=98.5
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHH-HhccCCcEEE-EeCCHhhHHHHHHcCCCEEEEecc
Q 015894 117 PAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAI-QNVEGARFPV-LTPNLKGFEAAVAAGAKEVAIFAS 194 (398)
Q Consensus 117 ~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i-~~~~~~~l~~-l~~n~~~ie~a~~~Gv~~v~i~~~ 194 (398)
+.++-+++++.|.+.|++.||++.-. + +..+.++.+ ++.++..+.+ .+-+.++++.|+++|+|.|+.- .
T Consensus 26 ~~~~~~~~~~al~~gGv~~iel~~k~-~-------~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p-~ 96 (214)
T 1wbh_A 26 KLEHAVPMAKALVAGGVRVLNVTLRT-E-------CAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISP-G 96 (214)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEESCS-T-------THHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEES-S
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCC-h-------hHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcC-C
Confidence 45566899999999999999999532 1 234455544 3566544332 1235588999999999999753 1
Q ss_pred CchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcC
Q 015894 195 ASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVG 274 (398)
Q Consensus 195 ~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~ 274 (398)
.+ .++++.++++|..+-.. -.+++++ .++.++|+|.|.+
T Consensus 97 -~d------------------~~v~~~~~~~g~~~i~G-----------~~t~~e~----~~A~~~Gad~v~~------- 135 (214)
T 1wbh_A 97 -LT------------------EPLLKAATEGTIPLIPG-----------ISTVSEL----MLGMDYGLKEFKF------- 135 (214)
T ss_dssp -CC------------------HHHHHHHHHSSSCEEEE-----------ESSHHHH----HHHHHTTCCEEEE-------
T ss_pred -CC------------------HHHHHHHHHhCCCEEEe-----------cCCHHHH----HHHHHCCCCEEEE-------
Confidence 11 25678888999876421 1245553 4456799999887
Q ss_pred CHHH-H--HHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHh-CCCEEe
Q 015894 275 TPGT-V--IPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQM-GISTVD 322 (398)
Q Consensus 275 ~P~~-v--~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~a-Ga~~VD 322 (398)
.|.. + .++++.++..+|.+|+-.= =|.-..|+-.-+++ |+..|-
T Consensus 136 Fpa~~~gG~~~lk~i~~~~~~ipvvai----GGI~~~n~~~~l~agg~~~v~ 183 (214)
T 1wbh_A 136 FPAEANGGVKALQAIAGPFSQVRFCPT----GGISPANYRDYLALKSVLCIG 183 (214)
T ss_dssp TTTTTTTHHHHHHHHHTTCTTCEEEEB----SSCCTTTHHHHHTSTTBSCEE
T ss_pred ecCccccCHHHHHHHhhhCCCCeEEEE----CCCCHHHHHHHHhcCCCeEEE
Confidence 2211 1 4678888888877666442 24445577777887 665443
No 77
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=96.19 E-value=0.16 Score=46.38 Aligned_cols=184 Identities=10% Similarity=0.041 Sum_probs=99.7
Q ss_pred HHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe-C-------------C-----------Hhh
Q 015894 123 ELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT-P-------------N-----------LKG 177 (398)
Q Consensus 123 ~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~-~-------------n-----------~~~ 177 (398)
+.++.+.++|++.||+..+.. .+.+++.+.++. .+.++.++. + + .+.
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~-------~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 1k77_A 19 ERFAAARKAGFDAVEFLFPYN-------YSTLQIQKQLEQ-NHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLA 90 (260)
T ss_dssp GHHHHHHHHTCSEEECSCCTT-------SCHHHHHHHHHH-TTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEecCCCC-------CCHHHHHHHHHH-cCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHH
Confidence 345667788999999986321 345666655553 245544332 1 0 112
Q ss_pred HHHHHHcCCCEEEEeccCchHHHhhhcCCCHH----HHHHHHHHHHHHHHhCCCcEEEEEeeeecC--CCCCCCCHHHHH
Q 015894 178 FEAAVAAGAKEVAIFASASESFSKSNINCTIE----DSLIRYRDVALAARELSIPVRGYLSCVVGC--PVEGMVPPSKVA 251 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~----~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~--~~~~r~~~~~l~ 251 (398)
++.|.+.|++.|.+.....+ -+.+.+ ...+.+.++.++|++.|+.+. +...-.. |...-.+++.+.
T Consensus 91 i~~a~~lG~~~v~~~~g~~~------~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--~E~~~~~~~~~~~~~~~~~~~ 162 (260)
T 1k77_A 91 LEYALALNCEQVHVMAGVVP------AGEDAERYRAVFIDNIRYAADRFAPHGKRIL--VEALSPGVKPHYLFSSQYQAL 162 (260)
T ss_dssp HHHHHHTTCSEEECCCCBCC------TTSCHHHHHHHHHHHHHHHHHHHGGGTCEEE--ECCCCTTTSTTBSCCSHHHHH
T ss_pred HHHHHHcCCCEEEECcCCCC------CCCCHHHHHHHHHHHHHHHHHHHHHcCCEEE--EEeCCccCCCcCccCCHHHHH
Confidence 56677899999877543211 112333 445566777788889998764 3211000 111124566666
Q ss_pred HHHHHHHhCCCCEE-EEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCC
Q 015894 252 YVSKQLYDMGCSEI-SLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGG 330 (398)
Q Consensus 252 ~~a~~l~~~Gad~I-~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGe 330 (398)
++++.+ +.+.+ ..-|+.=...-. .+....+++ +.+--.++|+||..| .
T Consensus 163 ~l~~~~---~~~~~g~~~D~~h~~~~~--~d~~~~l~~-~~~~i~~vH~~D~~~-------------------------r 211 (260)
T 1k77_A 163 AIVEEV---ARDNVFIQLDTFHAQKVD--GNLTHLIRD-YAGKYAHVQIAGLPD-------------------------R 211 (260)
T ss_dssp HHHHHH---CCTTEEEEEEHHHHHHHT--CCHHHHHHH-TTTSEEEEEECCTTT-------------------------C
T ss_pred HHHHHh---CCCCEEEEeeHHHHHhhC--CCHHHHHHH-hhhheeEEEECCCCC-------------------------C
Confidence 665543 43322 233542111000 012233333 333347889998753 1
Q ss_pred CCCCCCCCCCccHHHHHHHHHhCCCC
Q 015894 331 CPYAKGASGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 331 cp~a~graGNa~lE~vv~~L~~~Gi~ 356 (398)
++ +| .|..+...++..|++.|++
T Consensus 212 ~~--~G-~G~id~~~~~~~L~~~gy~ 234 (260)
T 1k77_A 212 HE--PD-DGEINYPWLFRLFDEVGYQ 234 (260)
T ss_dssp CC--SS-SSSSCHHHHHHHHHHTTCC
T ss_pred CC--CC-CCccCHHHHHHHHHHcCCC
Confidence 11 22 6889999999999987775
No 78
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=96.11 E-value=0.11 Score=49.64 Aligned_cols=173 Identities=9% Similarity=0.013 Sum_probs=106.1
Q ss_pred EEeCCC---cccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHh---ccCCcEEEEeC
Q 015894 100 IVEVGP---RDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQN---VEGARFPVLTP 173 (398)
Q Consensus 100 i~D~TL---RDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~---~~~~~l~~l~~ 173 (398)
++++|. .||.+. .+.+..++.++.+.+.|.+.|++|.-.+.. .+.+.+...++. ..++.++.=+.
T Consensus 16 ilN~Tpdsf~dg~~~----~~~~~a~~~a~~~v~~GAdiIDIg~~s~~~-----eE~~rv~~vi~~l~~~~~~pisIDT~ 86 (271)
T 2yci_X 16 RINGMFKDIREAILN----KDPRPIQEWARRQAEKGAHYLDVNTGPTAD-----DPVRVMEWLVKTIQEVVDLPCCLDST 86 (271)
T ss_dssp EEETTSHHHHHHHHT----TCCHHHHHHHHHHHHTTCSEEEEECCSCSS-----CHHHHHHHHHHHHHHHCCCCEEEECS
T ss_pred ecCCChhhHHHhhhh----CCHHHHHHHHHHHHHCCCCEEEEcCCcCch-----hHHHHHHHHHHHHHHhCCCeEEEeCC
Confidence 566773 355554 456888899999999999999999765321 223444444443 23666766677
Q ss_pred CHhhHHHHHHc--CCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCC----H
Q 015894 174 NLKGFEAAVAA--GAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVP----P 247 (398)
Q Consensus 174 n~~~ie~a~~~--Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~----~ 247 (398)
+.+-+++++++ |.+.|.=.... + +++.++...++++|..+. ++.. . +.....+ .
T Consensus 87 ~~~v~~aal~a~~Ga~iINdvs~~--------------~--d~~~~~~~~~a~~~~~vv--~m~~-d-~~G~p~t~~~~~ 146 (271)
T 2yci_X 87 NPDAIEAGLKVHRGHAMINSTSAD--------------Q--WKMDIFFPMAKKYEAAII--GLTM-N-EKGVPKDANDRS 146 (271)
T ss_dssp CHHHHHHHHHHCCSCCEEEEECSC--------------H--HHHHHHHHHHHHHTCEEE--EESC-B-TTBCCCSHHHHH
T ss_pred CHHHHHHHHHhCCCCCEEEECCCC--------------c--cccHHHHHHHHHcCCCEE--EEec-C-CCCCCCCHHHHH
Confidence 88888999998 99887622111 0 334566777888888664 3322 0 0111234 4
Q ss_pred HHHHHHHHHHHhCCCCE--EEEccCcCc--CCHHHHHHHHHHHH---hhC-CCCeEEEEeCC
Q 015894 248 SKVAYVSKQLYDMGCSE--ISLGDTIGV--GTPGTVIPMLEAVL---DAV-PVDKLAVHFHD 301 (398)
Q Consensus 248 ~~l~~~a~~l~~~Gad~--I~L~DT~G~--~~P~~v~~lv~~l~---~~~-p~~~l~~H~Hn 301 (398)
+++.+.++.+.++|++. |.|==.+|. -+.++-.++++.++ +.. |+.|+-+=.+|
T Consensus 147 ~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~~~~~~~l~~l~~~~~~~~p~~p~l~G~Sn 208 (271)
T 2yci_X 147 QLAMELVANADAHGIPMTELYIDPLILPVNVAQEHAVEVLETIRQIKLMANPAPRTVLGLSN 208 (271)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCCCCTTTSTHHHHHHHHHHHHHTTSSSSCCEEEEEGGG
T ss_pred HHHHHHHHHHHHCCCCcccEEEecCCCccccCHHHHHHHHHHHHHHHHhCCCCCCEEEeeCc
Confidence 56666777888899863 655334443 13455556666655 344 56666664444
No 79
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=96.10 E-value=0.64 Score=42.75 Aligned_cols=168 Identities=11% Similarity=0.111 Sum_probs=90.4
Q ss_pred HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHH--HHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 015894 178 FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALA--ARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSK 255 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~--ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~ 255 (398)
++.|.+.|++.|.+...... ...+.++.++++.+.++. +++.|+.+. +....+.+..--.+++.+.++++
T Consensus 95 i~~A~~lGa~~v~~~~g~~~------~~~~~~~~~~~~~~~l~~l~a~~~gv~l~--lEn~~~~~~~~~~~~~~~~~l~~ 166 (285)
T 1qtw_A 95 MQRCEQLGLSLLNFHPGSHL------MQISEEDCLARIAESINIALDKTQGVTAV--IENTAGQGSNLGFKFEHLAAIID 166 (285)
T ss_dssp HHHHHHTTCCEEEECCCBCT------TTSCHHHHHHHHHHHHHHHHHHCSSCEEE--EECCCCCTTBCCSSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcCCCC------CCCCHHHHHHHHHHHHHHHHhccCCCEEE--EecCCCCCCcccCCHHHHHHHHH
Confidence 45677889999877544211 112556666655554443 344566543 43221111111236777777765
Q ss_pred HHHhCCCCEE-EEccC-----cC--cCCHHHHHHHHHHHHhhCC-CCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccc
Q 015894 256 QLYDMGCSEI-SLGDT-----IG--VGTPGTVIPMLEAVLDAVP-VDKLAVHFHDTYGQALSNILASLQMGISTVDSSVS 326 (398)
Q Consensus 256 ~l~~~Gad~I-~L~DT-----~G--~~~P~~v~~lv~~l~~~~p-~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~ 326 (398)
.+. +.+.+ ..-|| .| ...|..+.+.++.+.+..+ +-..++|+||..+- .|..
T Consensus 167 ~v~--~~~~~g~~~D~~H~~~~g~~~~~~~~~~~~~~~~~~~~g~~~i~~vH~~D~~~~----------~~~~------- 227 (285)
T 1qtw_A 167 GVE--DKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKST----------FGSR------- 227 (285)
T ss_dssp HCS--CGGGEEEEEEHHHHHHHTCCCSSHHHHHHHHHHHHHHTCGGGEEEEEECEESSC----------TTCC-------
T ss_pred hhc--CccceEEEEEhHhHHHcCCCcCChHHHHHHHHHHHHhcCccceeEEEEecCCCc----------ccCC-------
Confidence 441 32222 22355 22 2345567777888776664 44578999987642 0110
Q ss_pred cCCCCCCCCCCCCCccHHHHHHHHHhCCCCCcc-------ChHHHHHHHHHHHHHhC
Q 015894 327 GLGGCPYAKGASGNVATEDVVYMLNGLGVRTNV-------DIRKLMIAGDFICKHLG 376 (398)
Q Consensus 327 GlGecp~a~graGNa~lE~vv~~L~~~Gi~t~i-------Dl~~L~~~~~~v~~~~g 376 (398)
-.+ ...+ +.|..+.+.++..|++.|++ ++ +.+.+.+..+++++..+
T Consensus 228 -~~~-h~~~-G~G~id~~~~~~~L~~~gy~-g~~~~lE~~~~~~~~~s~~~lr~~~~ 280 (285)
T 1qtw_A 228 -VDR-HHSL-GEGNIGHDAFRWIMQDDRFD-GIPLILETINPDIWAEEIAWLKAQQT 280 (285)
T ss_dssp -CCC-EECT-TTSSSCSHHHHHHHTCGGGT-TSEEEECCSCGGGHHHHHHHHHHHTT
T ss_pred -ccc-ccCC-CCCCCCHHHHHHHHhccCcC-CCCEEEecCCCcchHHHHHHHHHHHh
Confidence 000 0111 35788999999999875542 21 34566666677776654
No 80
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=96.07 E-value=0.0073 Score=57.04 Aligned_cols=166 Identities=16% Similarity=0.144 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHhcCCCEEEE----ecCCCCCcccCCCCHHHHHHHHHhc-cCCcEEE--EeCCH-hhHHHHHHcCCCEEE
Q 015894 119 VVKVELIKLLVSSGLAVVEA----TSFVSPKWVPQLADAKDVMAAIQNV-EGARFPV--LTPNL-KGFEAAVAAGAKEVA 190 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEv----G~~~~~~~~p~~~D~~~v~~~i~~~-~~~~l~~--l~~n~-~~ie~a~~~Gv~~v~ 190 (398)
..-.+-++.+.++|++.+-+ |.|+ |.+.--..+.+.+|+. |+..+-+ ++.+. +-++.++++|++.|.
T Consensus 40 ~~L~~~i~~l~~~G~d~lHvDVmDg~FV-----pnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~it 114 (246)
T 3inp_A 40 ARLGDDVKAVLAAGADNIHFDVMDNHYV-----PNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIV 114 (246)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEEBSSSS-----SCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEE
T ss_pred hhHHHHHHHHHHcCCCEEEEEecCCCcC-----cchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEE
Confidence 33456678888999996555 5554 3333334567777754 3665555 23343 447888999999999
Q ss_pred EeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE---
Q 015894 191 IFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL--- 267 (398)
Q Consensus 191 i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L--- 267 (398)
+..-.. +.+.+.++.+|++|.++.+.+. |. ++.+.+.++.. ++|.|.+
T Consensus 115 vH~Ea~----------------~~~~~~i~~ir~~G~k~Gvaln-----p~---Tp~e~l~~~l~-----~vD~VlvMsV 165 (246)
T 3inp_A 115 FHPEAS----------------EHIDRSLQLIKSFGIQAGLALN-----PA---TGIDCLKYVES-----NIDRVLIMSV 165 (246)
T ss_dssp ECGGGC----------------SCHHHHHHHHHTTTSEEEEEEC-----TT---CCSGGGTTTGG-----GCSEEEEECS
T ss_pred Eccccc----------------hhHHHHHHHHHHcCCeEEEEec-----CC---CCHHHHHHHHh-----cCCEEEEeee
Confidence 864322 2245667888999998875444 21 23444433332 4777654
Q ss_pred -ccCcCcCCHHHHHHHHHHHHhhC----CCCeEEEEeCCccchHHHHHHHHHHhCCCEEe
Q 015894 268 -GDTIGVGTPGTVIPMLEAVLDAV----PVDKLAVHFHDTYGQALSNILASLQMGISTVD 322 (398)
Q Consensus 268 -~DT~G~~~P~~v~~lv~~l~~~~----p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD 322 (398)
+...|...-....+.++.+|+.. ++.+|++ |-|....|+-.++++||+.+=
T Consensus 166 ~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~V----DGGI~~~ti~~~~~aGAD~~V 221 (246)
T 3inp_A 166 NPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEI----DGGVNPYNIAEIAVCGVNAFV 221 (246)
T ss_dssp CTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEE----ESSCCTTTHHHHHTTTCCEEE
T ss_pred cCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEE----ECCcCHHHHHHHHHcCCCEEE
Confidence 33344322233444466666543 3345665 556667788899999999753
No 81
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=96.02 E-value=0.43 Score=44.57 Aligned_cols=172 Identities=13% Similarity=0.121 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHh-cc-CCcEEEEe---C-------C---HhhHHHHHH
Q 015894 119 VVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQN-VE-GARFPVLT---P-------N---LKGFEAAVA 183 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~-~~-~~~l~~l~---~-------n---~~~ie~a~~ 183 (398)
++..++++.+.+.|++.|.+.. .+ ...+.+ .. +..+..-. . . ...++.+++
T Consensus 45 ~~~~~~~~~~~~~g~~~i~~~~----~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~~ 110 (273)
T 2qjg_A 45 IDIRKTVNDVAEGGANAVLLHK----GI----------VRHGHRGYGKDVGLIIHLSGGTAISPNPLKKVIVTTVEEAIR 110 (273)
T ss_dssp SSHHHHHHHHHHHTCSEEEECH----HH----------HHSCCCSSSCCCEEEEECEECCTTSSSTTCCEECSCHHHHHH
T ss_pred hhHHHHHHHHHhcCCCEEEeCH----HH----------HHHHHHhhcCCCCEEEEEcCCCcCCCCcccchHHHHHHHHHH
Confidence 3445899999999999998632 11 111111 11 12121111 1 1 457889999
Q ss_pred cCCCEE--EEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCC
Q 015894 184 AGAKEV--AIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMG 261 (398)
Q Consensus 184 ~Gv~~v--~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~G 261 (398)
.|++.| .+..... +.++.++.++++++.+++.|+.+.+.+. ..|.......+++.+.++++.+.+.|
T Consensus 111 ~Ga~~v~~~l~~~~~----------~~~~~~~~~~~v~~~~~~~g~~viv~~~-~~G~~l~~~~~~~~~~~~a~~a~~~G 179 (273)
T 2qjg_A 111 MGADAVSIHVNVGSD----------EDWEAYRDLGMIAETCEYWGMPLIAMMY-PRGKHIQNERDPELVAHAARLGAELG 179 (273)
T ss_dssp TTCSEEEEEEEETST----------THHHHHHHHHHHHHHHHHHTCCEEEEEE-ECSTTCSCTTCHHHHHHHHHHHHHTT
T ss_pred cCCCEEEEEEecCCC----------CHHHHHHHHHHHHHHHHHcCCCEEEEeC-CCCcccCCCCCHhHHHHHHHHHHHcC
Confidence 999999 5544321 4557788889999999999998865321 22211001145667777778899999
Q ss_pred CCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCc---cchHHHHHHHHHHhCCCEEee
Q 015894 262 CSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDT---YGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 262 ad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd---~GlA~ANalaAl~aGa~~VD~ 323 (398)
+|.|.+.-+ ..+ ++++.+++..+ +|+-.|+=-+ .--++.....++++||+.|-+
T Consensus 180 ad~i~~~~~---~~~----~~l~~i~~~~~-ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 180 ADIVKTSYT---GDI----DSFRDVVKGCP-APVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp CSEEEECCC---SSH----HHHHHHHHHCS-SCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCEEEECCC---CCH----HHHHHHHHhCC-CCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 999888742 233 34455555554 4677776333 333444467777899986654
No 82
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=95.96 E-value=0.041 Score=50.25 Aligned_cols=166 Identities=13% Similarity=0.050 Sum_probs=93.2
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc-cCCcEEEEe---CCH-hhHHHHHHcCCCEEE
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV-EGARFPVLT---PNL-KGFEAAVAAGAKEVA 190 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~-~~~~l~~l~---~n~-~~ie~a~~~Gv~~v~ 190 (398)
.+.++-+++++.+ +.|++.+|+|++..-.. ..++++.+++. ++..+.... ... .-++.+.++|++.+.
T Consensus 16 ~~~~~~~~~~~~~-~~~vd~ie~g~~~~~~~------G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~ 88 (218)
T 3jr2_A 16 TNLTDAVAVASNV-ASYVDVIEVGTILAFAE------GMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWIT 88 (218)
T ss_dssp SSHHHHHHHHHHH-GGGCSEEEECHHHHHHH------TTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHh-cCCceEEEeCcHHHHhc------CHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEE
Confidence 4677888999997 66999999997421100 11455666644 555443321 222 346888999999998
Q ss_pred EeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc--
Q 015894 191 IFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLG-- 268 (398)
Q Consensus 191 i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~-- 268 (398)
+.....+ +.+.++++.++++|..+.+.+ .+ + .+++... .+.+.|+|.+.+.
T Consensus 89 vh~~~~~---------------~~~~~~~~~~~~~g~~~~~d~---l~-~----~T~~~~~----~~~~~g~d~v~~~~~ 141 (218)
T 3jr2_A 89 VSAAAHI---------------ATIAACKKVADELNGEIQIEI---YG-N----WTMQDAK----AWVDLGITQAIYHRS 141 (218)
T ss_dssp EETTSCH---------------HHHHHHHHHHHHHTCEEEEEC---CS-S----CCHHHHH----HHHHTTCCEEEEECC
T ss_pred EecCCCH---------------HHHHHHHHHHHHhCCccceee---ee-c----CCHHHHH----HHHHcCccceeeeec
Confidence 8654322 224466777888898764211 21 1 2454433 3445699976551
Q ss_pred ---cCcCc-CCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEe
Q 015894 269 ---DTIGV-GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVD 322 (398)
Q Consensus 269 ---DT~G~-~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD 322 (398)
...|. ..|..+ +.++.++. ++.++.+=+ |.-..|+-.++++||+.|=
T Consensus 142 ~~~~~~g~~~~~~~l-~~i~~~~~--~~~pi~v~G----GI~~~~~~~~~~aGAd~vv 192 (218)
T 3jr2_A 142 RDAELAGIGWTTDDL-DKMRQLSA--LGIELSITG----GIVPEDIYLFEGIKTKTFI 192 (218)
T ss_dssp HHHHHHTCCSCHHHH-HHHHHHHH--TTCEEEEES----SCCGGGGGGGTTSCEEEEE
T ss_pred cccccCCCcCCHHHH-HHHHHHhC--CCCCEEEEC----CCCHHHHHHHHHcCCCEEE
Confidence 11132 233333 33444442 334555433 3334455678899988653
No 83
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=95.84 E-value=0.34 Score=44.85 Aligned_cols=157 Identities=14% Similarity=0.082 Sum_probs=98.0
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE------------EeCCHhhHHHHHH
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV------------LTPNLKGFEAAVA 183 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~------------l~~n~~~ie~a~~ 183 (398)
.+.....++++...+.|...|+++. . +.++.+++..+..+.+ +.+..++++.+.+
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~~~------------~-~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~ 99 (229)
T 3q58_A 33 DKPEIVAAMAQAAASAGAVAVRIEG------------I-ENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQ 99 (229)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEES------------H-HHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHCCCcEEEECC------------H-HHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHH
Confidence 4678889999999999999999964 1 3355666544443322 2245567889999
Q ss_pred cCCCEEEEeccC--chHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCC
Q 015894 184 AGAKEVAIFASA--SESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMG 261 (398)
Q Consensus 184 ~Gv~~v~i~~~~--Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~G 261 (398)
+|+|.|.+-... ++ +.+.++++.++++|+.+.+.+ .+.++ ++.+.+.|
T Consensus 100 aGad~I~l~~~~~~~p---------------~~l~~~i~~~~~~g~~v~~~v-----------~t~ee----a~~a~~~G 149 (229)
T 3q58_A 100 AGADIIAFDASFRSRP---------------VDIDSLLTRIRLHGLLAMADC-----------STVNE----GISCHQKG 149 (229)
T ss_dssp HTCSEEEEECCSSCCS---------------SCHHHHHHHHHHTTCEEEEEC-----------SSHHH----HHHHHHTT
T ss_pred cCCCEEEECccccCCh---------------HHHHHHHHHHHHCCCEEEEec-----------CCHHH----HHHHHhCC
Confidence 999988664332 11 234567788888898775321 23433 56677899
Q ss_pred CCEEEE--cc-CcC--cCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH-HHHHHHHHHhCCCEEee
Q 015894 262 CSEISL--GD-TIG--VGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA-LSNILASLQMGISTVDS 323 (398)
Q Consensus 262 ad~I~L--~D-T~G--~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA-~ANalaAl~aGa~~VD~ 323 (398)
+|.|.+ -+ |.+ ...| . .++++.+++. ++|+-.=+ |.. ..++..++++||+.|=+
T Consensus 150 ad~Ig~~~~g~t~~~~~~~~-~-~~li~~l~~~--~ipvIA~G----GI~t~~d~~~~~~~GadgV~V 209 (229)
T 3q58_A 150 IEFIGTTLSGYTGPITPVEP-D-LAMVTQLSHA--GCRVIAEG----RYNTPALAANAIEHGAWAVTV 209 (229)
T ss_dssp CSEEECTTTTSSSSCCCSSC-C-HHHHHHHHTT--TCCEEEES----SCCSHHHHHHHHHTTCSEEEE
T ss_pred CCEEEecCccCCCCCcCCCC-C-HHHHHHHHHc--CCCEEEEC----CCCCHHHHHHHHHcCCCEEEE
Confidence 999953 11 111 1122 2 2566666654 34444432 442 56777788889886644
No 84
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=95.79 E-value=0.46 Score=43.68 Aligned_cols=172 Identities=15% Similarity=0.074 Sum_probs=97.3
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--C---CH-----hhHHHHHHc
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--P---NL-----KGFEAAVAA 184 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~---n~-----~~ie~a~~~ 184 (398)
..+.++..++++...+.|+..+-+ .|.+++ ...+.++ ++++...+ | +. ...+.|++.
T Consensus 16 ~~t~~~i~~l~~~a~~~g~~~v~v----~~~~v~------~~~~~l~---~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~ 82 (225)
T 1mzh_A 16 HLSEKEIEEFVLKSEELGIYAVCV----NPYHVK------LASSIAK---KVKVCCVIGFPLGLNKTSVKVKEAVEAVRD 82 (225)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEE----CGGGHH------HHHHHCS---SSEEEEEESTTTCCSCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEE----CHHHHH------HHHHHhc---CCceeeEecCCCCccchhhhHHHHHHHHHc
Confidence 468888889999999999998774 333221 1122222 45554433 2 11 235688899
Q ss_pred CCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCE
Q 015894 185 GAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSE 264 (398)
Q Consensus 185 Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~ 264 (398)
|++.|.+.+..+-. + ....+..++.+..+.+.+. ++.+. +... . ...+++...++++.+.++|+|.
T Consensus 83 Gad~Id~viN~g~~--~---~~~~~~~~~~i~~v~~a~~--pv~vK--vi~e--~---~~l~~~~~~~~a~~a~eaGad~ 148 (225)
T 1mzh_A 83 GAQELDIVWNLSAF--K---SEKYDFVVEELKEIFRETP--SAVHK--VIVE--T---PYLNEEEIKKAVEICIEAGADF 148 (225)
T ss_dssp TCSEEEEECCHHHH--H---TTCHHHHHHHHHHHHHTCT--TSEEE--EECC--G---GGCCHHHHHHHHHHHHHHTCSE
T ss_pred CCCEEEEEecHHHH--h---cCChHHHHHHHHHHHHHhc--CceEE--EEEe--C---CCCCHHHHHHHHHHHHHhCCCE
Confidence 99999987665441 1 1133444444333333222 33332 3211 1 1246778999999999999999
Q ss_pred EEEccC---cCcCCHHHHHHHHHHHHhhCCCCeEEEEe-CCccchHHHHHHHHHHhCCCEE
Q 015894 265 ISLGDT---IGVGTPGTVIPMLEAVLDAVPVDKLAVHF-HDTYGQALSNILASLQMGISTV 321 (398)
Q Consensus 265 I~L~DT---~G~~~P~~v~~lv~~l~~~~p~~~l~~H~-Hnd~GlA~ANalaAl~aGa~~V 321 (398)
| -..| .|..++..++.+.+.+... +||-.=+ =.+ ...+++.+++||+.|
T Consensus 149 I-~tstg~~~gga~~~~i~~v~~~v~~~---ipVia~GGI~t----~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 149 I-KTSTGFAPRGTTLEEVRLIKSSAKGR---IKVKASGGIRD----LETAISMIEAGADRI 201 (225)
T ss_dssp E-ECCCSCSSSCCCHHHHHHHHHHHTTS---SEEEEESSCCS----HHHHHHHHHTTCSEE
T ss_pred E-EECCCCCCCCCCHHHHHHHHHHhCCC---CcEEEECCCCC----HHHHHHHHHhCchHH
Confidence 9 3344 2334555555544443222 3333322 122 366777888999965
No 85
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=95.76 E-value=0.41 Score=44.36 Aligned_cols=159 Identities=13% Similarity=0.103 Sum_probs=97.7
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE------------EeCCHhhHHHHHH
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV------------LTPNLKGFEAAVA 183 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~------------l~~n~~~ie~a~~ 183 (398)
.+.....++++...+.|...|+++. . +.++.+++..+..+.+ +.+..++++.+++
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~~~------------~-~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~ 99 (232)
T 3igs_A 33 DKPEIVAAMALAAEQAGAVAVRIEG------------I-DNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQ 99 (232)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEES------------H-HHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHCCCeEEEECC------------H-HHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHH
Confidence 4678889999999999999999963 1 3455666544444322 1245567889999
Q ss_pred cCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCC
Q 015894 184 AGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCS 263 (398)
Q Consensus 184 ~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad 263 (398)
.|+|.|.+-...- .++ +.+.++++.++++|+.+.+.+ .+.++ ++.+.+.|+|
T Consensus 100 ~Gad~V~l~~~~~---------~~p----~~l~~~i~~~~~~g~~v~~~v-----------~t~ee----a~~a~~~Gad 151 (232)
T 3igs_A 100 AGAAIIAVDGTAR---------QRP----VAVEALLARIHHHHLLTMADC-----------SSVDD----GLACQRLGAD 151 (232)
T ss_dssp HTCSEEEEECCSS---------CCS----SCHHHHHHHHHHTTCEEEEEC-----------CSHHH----HHHHHHTTCS
T ss_pred cCCCEEEECcccc---------CCH----HHHHHHHHHHHHCCCEEEEeC-----------CCHHH----HHHHHhCCCC
Confidence 9999887644320 001 234567788888898775321 23433 5667789999
Q ss_pred EEEE--ccC-cC--cCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH-HHHHHHHHHhCCCEEee
Q 015894 264 EISL--GDT-IG--VGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA-LSNILASLQMGISTVDS 323 (398)
Q Consensus 264 ~I~L--~DT-~G--~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA-~ANalaAl~aGa~~VD~ 323 (398)
.|.+ -+- .+ ...| -.++++.+++. ++|+-.= -|.. ..++..++++||+.|=+
T Consensus 152 ~Ig~~~~g~t~~~~~~~~--~~~~i~~l~~~--~ipvIA~----GGI~t~~d~~~~~~~GadgV~V 209 (232)
T 3igs_A 152 IIGTTMSGYTTPDTPEEP--DLPLVKALHDA--GCRVIAE----GRYNSPALAAEAIRYGAWAVTV 209 (232)
T ss_dssp EEECTTTTSSSSSCCSSC--CHHHHHHHHHT--TCCEEEE----SCCCSHHHHHHHHHTTCSEEEE
T ss_pred EEEEcCccCCCCCCCCCC--CHHHHHHHHhc--CCcEEEE----CCCCCHHHHHHHHHcCCCEEEE
Confidence 9963 111 11 1122 12456666654 3344432 3443 57777888899986644
No 86
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=95.74 E-value=0.65 Score=44.27 Aligned_cols=202 Identities=14% Similarity=0.127 Sum_probs=110.0
Q ss_pred cEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCC-CCCcccCCCCHHHHHHHHH---hc--cCCcEEEE
Q 015894 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFV-SPKWVPQLADAKDVMAAIQ---NV--EGARFPVL 171 (398)
Q Consensus 98 I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~-~~~~~p~~~D~~~v~~~i~---~~--~~~~l~~l 171 (398)
+-|+-+|+ |-..--|..++.+..++-++.|.+.|.+.|++|--. .|...| ....+|+.+.++ .+ +++.+++=
T Consensus 10 MGIlNvTP-DSFsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~-vs~eeE~~Rv~pvi~~l~~~~v~iSID 87 (270)
T 4hb7_A 10 MGILNVTP-DSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEM-VTLEEELNRVLPVVEAIVGFDVKISVD 87 (270)
T ss_dssp EEEEECC-----------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCC-CCHHHHHHHHHHHHHHHTTSSSEEEEE
T ss_pred EEEEeCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCC-CchHHHHHHHHHHHHHhhcCCCeEEEE
Confidence 44666665 333322334678888999999999999999999643 243222 112233333333 33 34555544
Q ss_pred eCCHhhHHHHHHcCCCEEEEec-cCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCC---H
Q 015894 172 TPNLKGFEAAVAAGAKEVAIFA-SASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVP---P 247 (398)
Q Consensus 172 ~~n~~~ie~a~~~Gv~~v~i~~-~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~---~ 247 (398)
+...+-.+.|+++|++.|.=.. ...| .++.+.+.+.+..+. +|..-+.|.....- .
T Consensus 88 T~~~~Va~~al~aGa~iINDVs~g~~d------------------~~m~~~va~~~~~~v--lMH~~~~p~~~~vv~ev~ 147 (270)
T 4hb7_A 88 TFRSEVAEACLKLGVDMINDQWAGLYD------------------HRMFQIVAKYDAEII--LMHNGNGNRDEPVVEEML 147 (270)
T ss_dssp CSCHHHHHHHHHHTCCEEEETTTTSSC------------------THHHHHHHHTTCEEE--EECCCSSCCSSCHHHHHH
T ss_pred CCCHHHHHHHHHhccceeccccccccc------------------hhHHHHHHHcCCCeE--EeccccCCccccchhHHH
Confidence 5667778899999999876321 1111 134456677887664 66554444211100 1
Q ss_pred HHHHHHHHHHHhCCCC--EEEEccCcCcC-CHHHHHHHHHHHHhh----CCCCeEEE-------E--eCC-----ccchH
Q 015894 248 SKVAYVSKQLYDMGCS--EISLGDTIGVG-TPGTVIPMLEAVLDA----VPVDKLAV-------H--FHD-----TYGQA 306 (398)
Q Consensus 248 ~~l~~~a~~l~~~Gad--~I~L~DT~G~~-~P~~v~~lv~~l~~~----~p~~~l~~-------H--~Hn-----d~GlA 306 (398)
+++.+-++.+.++|++ .|.|==-.|.+ ++++-.++++.+.+- +|. -+++ + ..+ ...-.
T Consensus 148 ~~l~~~i~~a~~aGI~~~~IilDPGiGFgKt~~~N~~ll~~l~~~~~lg~Pv-LvG~SRKsfig~~lg~~~~~~~R~~gt 226 (270)
T 4hb7_A 148 TSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPV-LLATSRKRFTKEMMGYDTTPVERDEVT 226 (270)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHTCHHHHHTTCSCB-EECCTTSHHHHHHHCSCCCSGGGHHHH
T ss_pred HHHHHHHHHHHHcCCCCceEEEeCCCCcccccccHHHHHhhHHHHhcCCCCE-EEEecHHHHHHHHhCCCCChHHhhHHH
Confidence 3445556677889984 56664455554 356666777666532 342 1221 0 111 12223
Q ss_pred HHHHHHHHHhCCCEEe
Q 015894 307 LSNILASLQMGISTVD 322 (398)
Q Consensus 307 ~ANalaAl~aGa~~VD 322 (398)
+|.+..|+..||++|=
T Consensus 227 ~a~~~~a~~~Ga~ivR 242 (270)
T 4hb7_A 227 AATTAYGIMKGVRAVR 242 (270)
T ss_dssp HHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHCCCCEEE
Confidence 5566677888998773
No 87
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=95.67 E-value=0.75 Score=44.70 Aligned_cols=206 Identities=15% Similarity=0.129 Sum_probs=109.4
Q ss_pred ccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCC-CCCcccCCCCHHHHHHHH---Hhc---cCCcEE
Q 015894 97 FVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFV-SPKWVPQLADAKDVMAAI---QNV---EGARFP 169 (398)
Q Consensus 97 ~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~-~~~~~p~~~D~~~v~~~i---~~~---~~~~l~ 169 (398)
=+-|+-+|+ |-..--|..++.+..++.+..+.+.|.+.|++|.-. .|...+ ....+|+.+.+ +.+ .++.++
T Consensus 12 iMGIlNvTP-DSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~-v~~~eE~~Rv~pvI~~l~~~~~vpiS 89 (314)
T 2vef_A 12 ICGIINVTP-DSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSY-VEIEEEIQRVVPVIKAIRKESDVLIS 89 (314)
T ss_dssp EEEEEECCC----------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CH-HHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred EEEEEeCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCC-CCHHHHHHHHHHHHHHHHhhCCceEE
Confidence 345666665 333332334678889999999999999999999743 232111 11113333222 222 255555
Q ss_pred EEeCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeee--cCCCCCC---
Q 015894 170 VLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVV--GCPVEGM--- 244 (398)
Q Consensus 170 ~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~f--g~~~~~r--- 244 (398)
.=+.+.+-+++|+++|++.|.=. |- ...+ .++.+.++++|..+. ++..= |.|....
T Consensus 90 IDT~~~~Va~aAl~aGa~iINDV---sg------~~~d--------~~m~~v~a~~~~~vv--lmh~~~~g~p~~~~~~~ 150 (314)
T 2vef_A 90 IDTWKSQVAEAALAAGADLVNDI---TG------LMGD--------EKMPHVVAEARAQVV--IMFNPVMARPQHPSSLI 150 (314)
T ss_dssp EECSCHHHHHHHHHTTCCEEEET---TT------TCSC--------TTHHHHHHHHTCEEE--EECCHHHHCTTSTTTTT
T ss_pred EeCCCHHHHHHHHHcCCCEEEEC---CC------CCCC--------hHHHHHHHHcCCCEE--EEecCCCCCCCCccccc
Confidence 55677888999999999877532 21 1111 133455677887664 44321 1121100
Q ss_pred ---------CC-----------H-----HHHHHHHHHHHhCCCC--EEEEccC-cCc-CCHHHHHHHHHHHHhhC-CCCe
Q 015894 245 ---------VP-----------P-----SKVAYVSKQLYDMGCS--EISLGDT-IGV-GTPGTVIPMLEAVLDAV-PVDK 294 (398)
Q Consensus 245 ---------~~-----------~-----~~l~~~a~~l~~~Gad--~I~L~DT-~G~-~~P~~v~~lv~~l~~~~-p~~~ 294 (398)
.+ . +++.+.++.+.++|++ .|.| |. +|. -+.++-.++++.+++.. ++.|
T Consensus 151 ~~~~~~g~~~~~~~~~~y~d~~v~e~v~~~l~~~i~~a~~~GI~~~~Iil-DPGiGF~kt~~~nl~ll~~l~~l~~~g~P 229 (314)
T 2vef_A 151 FPHFGFGQAFTEEELADFETLPIEELMEAFFERALARAAEAGIAPENILL-DPGIGFGLTKKENLLLLRDLDKLHQKGYP 229 (314)
T ss_dssp SCCCCC--CCCC--CHHHHHSCHHHHHHHHHHHHHHHHHHHTCCGGGEEE-ECCTTSSCCHHHHHHHHHTHHHHHTTSSC
T ss_pred ccccccccccccccccccccchHHHHHHHHHHHHHHHHHHcCCChhhEEE-eCCCCcccchHHHHHHHHHHHHhhcCCCC
Confidence 00 1 3344556677789984 4554 54 343 34566677777776542 3444
Q ss_pred EEEEeCC------------------------ccchH-HHHHHHHHHhCCCEEeec
Q 015894 295 LAVHFHD------------------------TYGQA-LSNILASLQMGISTVDSS 324 (398)
Q Consensus 295 l~~H~Hn------------------------d~GlA-~ANalaAl~aGa~~VD~S 324 (398)
+-+=.-| +...+ .+-+..|+..|+++|.+.
T Consensus 230 vL~G~SrKsfig~~~~~~g~~~~p~tel~~~~R~~~t~a~~~~a~~~Ga~IvRvH 284 (314)
T 2vef_A 230 IFLGVSRKRFVINILEENGFEVNPETELGFRNRDTASAHVTSIAARQGVEVVRVH 284 (314)
T ss_dssp BEEECSSCHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHHHHHTTCSEEEES
T ss_pred EEEEeCccHHHhhhhccccccCCcccccchhhhhHHHHHHHHHHHHcCCcEEEeC
Confidence 4442222 11122 344566788999888654
No 88
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=95.47 E-value=0.32 Score=46.66 Aligned_cols=200 Identities=16% Similarity=0.116 Sum_probs=116.7
Q ss_pred EEeCCCcccCCCCCCCCCHHHHHHHHHHHHhc--CCCEEEEecCCCCCcccCCCCHHHHHHHHH--hcc-CCcEEEEe--
Q 015894 100 IVEVGPRDGLQNEKNIVPAVVKVELIKLLVSS--GLAVVEATSFVSPKWVPQLADAKDVMAAIQ--NVE-GARFPVLT-- 172 (398)
Q Consensus 100 i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~a--Gv~~IEvG~~~~~~~~p~~~D~~~v~~~i~--~~~-~~~l~~l~-- 172 (398)
.+|-|+= +-.-+.++..++++...+. |+..+-+ +|.|+| ...+.++ ..+ ++++.+.+
T Consensus 35 ~IDhTlL------~p~~T~~dI~~lc~eA~~~~~~~aaVCV----~p~~V~------~a~~~L~~~gs~~~v~v~tVigF 98 (281)
T 2a4a_A 35 LTDHTFL------DENGTEDDIRELCNESVKTCPFAAAVCV----YPKFVK------FINEKIKQEINPFKPKIACVINF 98 (281)
T ss_dssp TEEEECC------CTTCCHHHHHHHHHHHHSSSSCCSEEEE----CGGGHH------HHHHHHHHHSSSCCSEEEEEEST
T ss_pred HcchhcC------CCCCCHHHHHHHHHHHHhccCCccEEEE----CHHHHH------HHHHHhhccCCCCCceEEEEeCC
Confidence 4566663 2245788889999999999 9999876 344443 3334444 223 56776655
Q ss_pred C----C----HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHH---HHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC
Q 015894 173 P----N----LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIE---DSLIRYRDVALAARELSIPVRGYLSCVVGCPV 241 (398)
Q Consensus 173 ~----n----~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~---~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~ 241 (398)
| + ...++.|++.|+++|.+.+....... -..+ +..+.+..+.+.|. +..+-+-|. .+
T Consensus 99 P~G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~lks-----g~~~~~~~v~~eI~~v~~a~~--~~~lKVIlE--t~--- 166 (281)
T 2a4a_A 99 PYGTDSMEKVLNDTEKALDDGADEIDLVINYKKIIE-----NTDEGLKEATKLTQSVKKLLT--NKILKVIIE--VG--- 166 (281)
T ss_dssp TTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHH-----SHHHHHHHHHHHHHHHHTTCT--TSEEEEECC--HH---
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEecchHhhhC-----CChhHHHHHHHHHHHHHHHhc--CCceEEEEe--cc---
Confidence 2 1 13678899999999999887553311 1223 44555554444443 333332232 21
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEc--cCcCcCCHHHHHHHHHHHHhh-------CCCCeEEEEeC---CccchHHHH
Q 015894 242 EGMVPPSKVAYVSKQLYDMGCSEISLG--DTIGVGTPGTVIPMLEAVLDA-------VPVDKLAVHFH---DTYGQALSN 309 (398)
Q Consensus 242 ~~r~~~~~l~~~a~~l~~~Gad~I~L~--DT~G~~~P~~v~~lv~~l~~~-------~p~~~l~~H~H---nd~GlA~AN 309 (398)
...+.+.+...++.+.++|+|.|--. =+.|..+|+++.-+.+.+++. -+ ++++-.= .|+--|++-
T Consensus 167 -~L~d~e~i~~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~--~vgVKaaGGIrt~e~al~~ 243 (281)
T 2a4a_A 167 -ELKTEDLIIKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKEYIKNNPEKNN--KIGLKVSGGISDLNTASHY 243 (281)
T ss_dssp -HHCSHHHHHHHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTT--CCEEEEESSCCSHHHHHHH
T ss_pred -cCCcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhhcccccCCC--CceEEEeCCCCCHHHHHHH
Confidence 22456667788999999999988755 234678999999888887642 12 2333211 155555544
Q ss_pred HHHHH-HhCCCEEeeccccCCC
Q 015894 310 ILASL-QMGISTVDSSVSGLGG 330 (398)
Q Consensus 310 alaAl-~aGa~~VD~Sv~GlGe 330 (398)
..++. ..|.+|++....=+|-
T Consensus 244 i~aga~~lG~~w~~~~~~RiGt 265 (281)
T 2a4a_A 244 ILLARRFLSSLACHPDNFRIGS 265 (281)
T ss_dssp HHHHHHHTC------CCEEEEE
T ss_pred HHHhhhhccccccccCceEEec
Confidence 44433 3677788777777776
No 89
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.43 E-value=0.43 Score=45.40 Aligned_cols=163 Identities=12% Similarity=0.076 Sum_probs=95.1
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE--EeCCHhhHHHHHHcCCCEEEEeccCch
Q 015894 120 VKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV--LTPNLKGFEAAVAAGAKEVAIFASASE 197 (398)
Q Consensus 120 ~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~--l~~n~~~ie~a~~~Gv~~v~i~~~~Sd 197 (398)
+-.++++...+.|...|.+-.. +++. .-..+.++.+++..+..+.. +..+..+++.|.++|+|.|.+-...-+
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd--~~~f---~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~ 147 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTE--QRRF---QGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALE 147 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECC--GGGH---HHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSC
T ss_pred CHHHHHHHHHHcCCCEEEEecC--hhhc---CCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEecccCC
Confidence 4478999999999999998421 1111 11123445555433332221 223566789999999999998544211
Q ss_pred HHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHH
Q 015894 198 SFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPG 277 (398)
Q Consensus 198 ~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~ 277 (398)
.+.+.++++.++++|+.+-+.+ .+++++. .+.++|++.|.+.-......+.
T Consensus 148 --------------~~~l~~l~~~a~~lGl~~lvev-----------~t~ee~~----~A~~~Gad~IGv~~r~l~~~~~ 198 (272)
T 3qja_A 148 --------------QSVLVSMLDRTESLGMTALVEV-----------HTEQEAD----RALKAGAKVIGVNARDLMTLDV 198 (272)
T ss_dssp --------------HHHHHHHHHHHHHTTCEEEEEE-----------SSHHHHH----HHHHHTCSEEEEESBCTTTCCB
T ss_pred --------------HHHHHHHHHHHHHCCCcEEEEc-----------CCHHHHH----HHHHCCCCEEEECCCccccccc
Confidence 1345677888999999864211 2455543 3446799998887433222222
Q ss_pred HHHHHHHHHHhhCC-CCeEEEEeCCccchH-HHHHHHHHHhCCCEE
Q 015894 278 TVIPMLEAVLDAVP-VDKLAVHFHDTYGQA-LSNILASLQMGISTV 321 (398)
Q Consensus 278 ~v~~lv~~l~~~~p-~~~l~~H~Hnd~GlA-~ANalaAl~aGa~~V 321 (398)
.+ +.+..+++.+| +.++-.= -|.. ..++....++|++.|
T Consensus 199 dl-~~~~~l~~~v~~~~pvVae----gGI~t~edv~~l~~~Gadgv 239 (272)
T 3qja_A 199 DR-DCFARIAPGLPSSVIRIAE----SGVRGTADLLAYAGAGADAV 239 (272)
T ss_dssp CT-THHHHHGGGSCTTSEEEEE----SCCCSHHHHHHHHHTTCSEE
T ss_pred CH-HHHHHHHHhCcccCEEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 22 23445555565 4444432 2333 467777788998855
No 90
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=95.36 E-value=0.63 Score=43.17 Aligned_cols=143 Identities=15% Similarity=0.114 Sum_probs=76.0
Q ss_pred HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 015894 178 FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQL 257 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l 257 (398)
++.|.+.|++.|.+..+..+. ...-..+...+.+.++.++|++.|+.+. +.. . ..+++.+.++++.+
T Consensus 108 i~~a~~lG~~~v~~~~G~~~~----~~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lE~------~-~~~~~~~~~l~~~~ 174 (290)
T 3tva_A 108 SDFASWVGCPAIGLHIGFVPE----SSSPDYSELVRVTQDLLTHAANHGQAVH--LET------G-QESADHLLEFIEDV 174 (290)
T ss_dssp HHHHHHHTCSEEEECCCCCCC----TTSHHHHHHHHHHHHHHHHHHTTTCEEE--EEC------C-SSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCCCcc----cchHHHHHHHHHHHHHHHHHHHcCCEEE--Eec------C-CCCHHHHHHHHHhc
Confidence 556777899998886442110 0111245567777888899999998754 221 1 13566666665543
Q ss_pred HhCCCCEE-EEccCcCcCC-H-HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCCC
Q 015894 258 YDMGCSEI-SLGDTIGVGT-P-GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYA 334 (398)
Q Consensus 258 ~~~Gad~I-~L~DT~G~~~-P-~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a 334 (398)
+.+.+ ..-|+.=... - .+..+.++.+.. --.++|+||..+-.. -.-|..+-.-. .+
T Consensus 175 ---~~~~~g~~~D~~h~~~~g~~d~~~~l~~~~~----~i~~vHl~D~~~~~~------~~~g~~~~~~~--~~------ 233 (290)
T 3tva_A 175 ---NRPNLGINFDPANMILYGTGNPIEALRKVAR----YVRSIHCKDALWAPV------NERGKSWGQEV--AL------ 233 (290)
T ss_dssp ---CCTTEEEEECHHHHHHTTCSCHHHHHHHHGG----GEEEEEECEEECCCG------GGBTTBCCEEE--ST------
T ss_pred ---CCCCEEEEeccHHHHHhCCCCHHHHHHHHHh----hheEEEeccccCCCc------ccccccccccc--CC------
Confidence 43322 3335422211 0 122333444332 247889998754210 00111110001 11
Q ss_pred CCCCCCccHHHHHHHHHhCCCC
Q 015894 335 KGASGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 335 ~graGNa~lE~vv~~L~~~Gi~ 356 (398)
+.|..+...++..|++.|++
T Consensus 234 --G~G~id~~~~~~~L~~~gy~ 253 (290)
T 3tva_A 234 --GTGDVGMEAYLTTLWEIGYR 253 (290)
T ss_dssp --TSSSSCHHHHHHHHHHTTCC
T ss_pred --CCceeCHHHHHHHHHHcCCC
Confidence 36789999999999987664
No 91
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=95.35 E-value=0.88 Score=40.74 Aligned_cols=156 Identities=12% Similarity=0.123 Sum_probs=94.9
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE---EeCCHhhHHHHHHcCCCEEEEe
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV---LTPNLKGFEAAVAAGAKEVAIF 192 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~---l~~n~~~ie~a~~~Gv~~v~i~ 192 (398)
.+.++-.++++.+.+.|++.|++.... +. ..+.+.+..+.. +..+.+ -+.+...++.++++|++.|++
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~-~~------~~~~i~~i~~~~-~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~- 86 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNS-PQ------WEQSIPAIVDAY-GDKALIGAGTVLKPEQVDALARMGCQLIVT- 86 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTS-TT------HHHHHHHHHHHH-TTTSEEEEECCCSHHHHHHHHHTTCCEEEC-
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC-hh------HHHHHHHHHHhC-CCCeEEEeccccCHHHHHHHHHcCCCEEEe-
Confidence 456777899999999999999997542 11 122222222222 232221 124567899999999999873
Q ss_pred ccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcC
Q 015894 193 ASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIG 272 (398)
Q Consensus 193 ~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G 272 (398)
+..+ .++++.++++|..+.+ | -.+++.+ ..+.+.|+|.|.+--|.
T Consensus 87 -~~~~------------------~~~~~~~~~~g~~~~~------g-----~~t~~e~----~~a~~~G~d~v~v~~t~- 131 (212)
T 2v82_A 87 -PNIH------------------SEVIRRAVGYGMTVCP------G-----CATATEA----FTALEAGAQALKIFPSS- 131 (212)
T ss_dssp -SSCC------------------HHHHHHHHHTTCEEEC------E-----ECSHHHH----HHHHHTTCSEEEETTHH-
T ss_pred -CCCC------------------HHHHHHHHHcCCCEEe------e-----cCCHHHH----HHHHHCCCCEEEEecCC-
Confidence 2111 1346777888987531 1 1245543 34567999998873221
Q ss_pred cCCHHHHHHHHHHHHhhCC-CCeEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 273 VGTPGTVIPMLEAVLDAVP-VDKLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 273 ~~~P~~v~~lv~~l~~~~p-~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
|. -.+.++.+++.+| ++++..=+ |....|....+++||+.|-+
T Consensus 132 ---~~-g~~~~~~l~~~~~~~ipvia~G----GI~~~~i~~~~~~Ga~gv~v 175 (212)
T 2v82_A 132 ---AF-GPQYIKALKAVLPSDIAVFAVG----GVTPENLAQWIDAGCAGAGL 175 (212)
T ss_dssp ---HH-CHHHHHHHHTTSCTTCEEEEES----SCCTTTHHHHHHHTCSEEEE
T ss_pred ---CC-CHHHHHHHHHhccCCCeEEEeC----CCCHHHHHHHHHcCCCEEEE
Confidence 11 2356667776666 45665533 34446777888899997754
No 92
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=95.35 E-value=0.52 Score=45.44 Aligned_cols=125 Identities=16% Similarity=0.123 Sum_probs=83.4
Q ss_pred hHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHH
Q 015894 177 GFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQ 256 (398)
Q Consensus 177 ~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~ 256 (398)
.++.|++.|++.|.+.+...+ -...+.++.+.++++.|+++|+.+.. +...|... ..+++.+...++.
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs--------~~~~~~l~~i~~v~~~a~~~GlpvIi--e~~~G~~~--~~d~e~i~~aari 197 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGS--------EYEHQSIKNIIQLVDAGMKVGMPTMA--VTGVGKDM--VRDQRYFSLATRI 197 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTS--------TTHHHHHHHHHHHHHHHHTTTCCEEE--EECC------CCSHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEEECCC--------CcHHHHHHHHHHHHHHHHHcCCEEEE--ECCCCCcc--CCCHHHHHHHHHH
Confidence 588999999998877543321 13456888899999999999998753 22222111 2567777888999
Q ss_pred HHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEe--CCccchHHHHHHHHHHhCCCEEee
Q 015894 257 LYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHF--HDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 257 l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~--Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
+.++|+|.|-..=| +..+ +.+.+..+ +|+-+=+ +-+.--.+.++-.|+++||+.+-+
T Consensus 198 A~elGAD~VKt~~t-----~e~~----~~vv~~~~-vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~v 256 (295)
T 3glc_A 198 AAEMGAQIIKTYYV-----EKGF----ERIVAGCP-VPIVIAGGKKLPEREALEMCWQAIDQGASGVDM 256 (295)
T ss_dssp HHHTTCSEEEEECC-----TTTH----HHHHHTCS-SCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHhCCCEEEeCCC-----HHHH----HHHHHhCC-CcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEe
Confidence 99999999888733 2333 44444443 3444433 223456688888999999985543
No 93
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=95.35 E-value=1.1 Score=43.16 Aligned_cols=205 Identities=13% Similarity=0.069 Sum_probs=124.5
Q ss_pred EEeCCCcccCCCCCCCCCHHHHHHHHHHHH-hcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc----cCCcEEEEe--
Q 015894 100 IVEVGPRDGLQNEKNIVPAVVKVELIKLLV-SSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV----EGARFPVLT-- 172 (398)
Q Consensus 100 i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~-~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~----~~~~l~~l~-- 172 (398)
++|-|+ .+..-+.++..++++.-. +.++..+-+ +|.|+| ...+.++.. .++++.+.+
T Consensus 29 ~IDhTl------L~p~~T~e~I~~lc~eA~~~~~~aaVCV----~P~~V~------~a~~~L~~~~~~~s~v~V~tVigF 92 (297)
T 4eiv_A 29 FFEVAA------LTDGETNESVAAVCKIAAKDPAIVGVSV----RPAFVR------FIRQELVKSAPEVAGIKVCAAVNF 92 (297)
T ss_dssp TEEEEE------CSTTCCHHHHHHHHHHHHSSSCCSEEEE----CGGGHH------HHHHTGGGTCGGGGGSEEEEEEST
T ss_pred hcCccC------CCCCCCHHHHHHHHHHHHhhcCcEEEEE----CHHHHH------HHHHHhcccCcCCCCCeEEEEecC
Confidence 566666 233567788888888777 778777766 444443 223334321 356766654
Q ss_pred C---C-----HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC
Q 015894 173 P---N-----LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGM 244 (398)
Q Consensus 173 ~---n-----~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r 244 (398)
| + ....+.|++.|+++|.+.+....... +..-..+...+.+..+.+.+. +..+-+-|. . ..-
T Consensus 93 P~G~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~--~~~g~~~~V~~eI~~v~~a~~--~~~lKVIlE--t----~~L 162 (297)
T 4eiv_A 93 PEGTGTPDTVSLEAVGALKDGADEIECLIDWRRMNE--NVADGESRIRLLVSEVKKVVG--PKTLKVVLS--G----GEL 162 (297)
T ss_dssp TTCCCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHH--CHHHHHHHHHHHHHHHHHHHT--TSEEEEECC--S----SCC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhc--ccCCcHHHHHHHHHHHHHHhc--CCceEEEEe--c----ccC
Confidence 3 1 13567889999999999988755322 111134456666666666663 333332222 1 122
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccC--cCcCCHHHHHHHHHHHHhhC---C--------------CCeEEEEeC----C
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDT--IGVGTPGTVIPMLEAVLDAV---P--------------VDKLAVHFH----D 301 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT--~G~~~P~~v~~lv~~l~~~~---p--------------~~~l~~H~H----n 301 (398)
.+.+.....++.+.++|+|-|--.-- .|.++|++++-+.+.+++.+ | ...+++-.- .
T Consensus 163 t~~e~i~~A~~ia~~AGADFVKTSTGf~~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIr 242 (297)
T 4eiv_A 163 QGGDIISRAAVAALEGGADFLQTSSGLGATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVH 242 (297)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHHHHHCC------------------CCEEEEECTTCC
T ss_pred CcHHHHHHHHHHHHHhCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCC
Confidence 34555678888899999997755443 24689999999999987432 1 123566555 5
Q ss_pred ccchHHHHHHHHHHhCCCEEeeccccCCC
Q 015894 302 TYGQALSNILASLQMGISTVDSSVSGLGG 330 (398)
Q Consensus 302 d~GlA~ANalaAl~aGa~~VD~Sv~GlGe 330 (398)
|+--|.+-.-++-+.|-++++....=+|.
T Consensus 243 t~e~A~~~i~~~~elG~~wl~~~~fRiGa 271 (297)
T 4eiv_A 243 MAETADFLMQMIFENGPRSIVRDKFRVGG 271 (297)
T ss_dssp HHHHHHHHHHHHHHHCGGGCSTTTEEEEE
T ss_pred CHHHHHHHHHHHHHhCccccCCCceEecc
Confidence 55566655555555777777766666665
No 94
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=95.33 E-value=0.35 Score=45.80 Aligned_cols=203 Identities=14% Similarity=0.048 Sum_probs=107.1
Q ss_pred HHHHHHHhcCCCEEEEecCCCCCcccC-C--CCHHHHHHHHHhccCCcEEEEeC--------C-----H-----------
Q 015894 123 ELIKLLVSSGLAVVEATSFVSPKWVPQ-L--ADAKDVMAAIQNVEGARFPVLTP--------N-----L----------- 175 (398)
Q Consensus 123 ~ia~~L~~aGv~~IEvG~~~~~~~~p~-~--~D~~~v~~~i~~~~~~~l~~l~~--------n-----~----------- 175 (398)
.+.+.+.++|++.||+.......+.|. . .+.+++.+.+++ .++++.++.. | .
T Consensus 39 ~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gl~i~~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~ 117 (316)
T 3qxb_A 39 LAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRK-AGLTIESTFGGLASYTYNHFLAPTLELQSLGYQHLK 117 (316)
T ss_dssp HHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHH-TTCEEEEEECCHHHHTSCBTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHH-cCCeEEEeeccccccccccCCCCCHHHHHHHHHHHH
Confidence 456777899999999986432111110 0 022333333332 3566554321 1 1
Q ss_pred hhHHHHHHcCCCEEEEeccC-c-hHHHh-hhcCCCHHHHHHHHHHHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHH
Q 015894 176 KGFEAAVAAGAKEVAIFASA-S-ESFSK-SNINCTIEDSLIRYRDVALAARELSIP-VRGYLSCVVGCPVEGMVPPSKVA 251 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~-S-d~~~~-~~~~~s~~~~l~~~~~~v~~ak~~G~~-v~~~l~~~fg~~~~~r~~~~~l~ 251 (398)
+.++.|.+.|++.|.+.... + ..+.. ....-..+...+.+.++.++|++.|+. +. +...-.. ...-.+++.+.
T Consensus 118 ~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~--lE~~~~~-~~~~~t~~~~~ 194 (316)
T 3qxb_A 118 RAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGLSMLY--VEPVPLA-TEFPSSAADAA 194 (316)
T ss_dssp HHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEE--ECCCSCT-TBSSCSHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCeEEE--EEecCCc-cccCCCHHHHH
Confidence 12556778899988764332 1 00000 000001344667778888999999987 64 3210000 11224678888
Q ss_pred HHHHHHHhCCCCEE-EEccCcCcCC------HHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeec
Q 015894 252 YVSKQLYDMGCSEI-SLGDTIGVGT------PGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 252 ~~a~~l~~~Gad~I-~L~DT~G~~~------P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
++++.+.+.+.+.+ ..-||.=... -....+.++.+..+ -.++|++|..+. . |.
T Consensus 195 ~l~~~v~~~~~~~vg~~lD~~H~~~~~~~~~~~d~~~~l~~~~~~----i~~vHlkD~~~~------------~---d~- 254 (316)
T 3qxb_A 195 RLMADLDGRTEIPVRLLVDWGHALFEPLFGPEADMDHWMDLCQPW----IAAYHIQQTDGQ------------L---DR- 254 (316)
T ss_dssp HHHHHHTTTSSSCEEEEEEHHHHTCHHHHGGGCSHHHHHHHHGGG----EEEEEECBCCSS------------S---CC-
T ss_pred HHHHHHhccCCCCEEEEEEccchheecccccccCHHHHHHHHHhh----heEEeeecCCCC------------c---Cc-
Confidence 88877654455444 3446532221 11233444444332 368999997651 0 10
Q ss_pred cccCCCCCCCCCCCCCccHHHHHHHHHhCCCC
Q 015894 325 VSGLGGCPYAKGASGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 325 v~GlGecp~a~graGNa~lE~vv~~L~~~Gi~ 356 (398)
-.++ + +.|..+.+.++..|++.|++
T Consensus 255 h~~~------~-G~G~id~~~i~~~L~~~gy~ 279 (316)
T 3qxb_A 255 HWSF------T-QPGVVTPQRLQDFWDKYALT 279 (316)
T ss_dssp CBCT------T-SCSSCCHHHHHHHHHHTTCS
T ss_pred cCCC------C-CCceECHHHHHHHHHHcCCC
Confidence 0011 1 25899999999999987664
No 95
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=95.30 E-value=0.63 Score=42.72 Aligned_cols=208 Identities=16% Similarity=0.115 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--CCHhhHHHHHHcCCCEEEEeccCc
Q 015894 119 VVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--PNLKGFEAAVAAGAKEVAIFASAS 196 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~n~~~ie~a~~~Gv~~v~i~~~~S 196 (398)
++-.++++.+.+.|++.|.+.-..... .+. ....+.++.+++..++.+.+.. ++.++++.++++|++.|.+-...
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~-~~~-~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~- 107 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATH-EER-AILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAA- 107 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSST-TCH-HHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHH-
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCccc-cCc-cccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHH-
Confidence 456889999999999988775221110 000 0112233444433355555443 46789999999999999884321
Q ss_pred hHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC-cEEEEEeeee--c---CCCCCCC--CHHHHHHHHHHHHhCCCCEEEEc
Q 015894 197 ESFSKSNINCTIEDSLIRYRDVALAARELSI-PVRGYLSCVV--G---CPVEGMV--PPSKVAYVSKQLYDMGCSEISLG 268 (398)
Q Consensus 197 d~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~-~v~~~l~~~f--g---~~~~~r~--~~~~l~~~a~~l~~~Gad~I~L~ 268 (398)
. .. .+.+.++.+ ..|. .+...+.+-. | ....+.. +.....+.++.+.+.|++.|.+.
T Consensus 108 --l-~~---------p~~~~~~~~---~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~ 172 (252)
T 1ka9_F 108 --V-RR---------PELIRELAD---HFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLT 172 (252)
T ss_dssp --H-HC---------THHHHHHHH---HHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEE
T ss_pred --H-hC---------cHHHHHHHH---HcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEe
Confidence 0 00 011222222 3331 1211122100 0 0001100 01123455677778999988876
Q ss_pred cC--cCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH-HHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHH
Q 015894 269 DT--IGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA-LSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATED 345 (398)
Q Consensus 269 DT--~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA-~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~ 345 (398)
++ .|...... .++++.+++..+ +|+-.- -|.. ..++....++||+.|=+.-.=+ .+.-+.++
T Consensus 173 ~~~~~g~~~g~~-~~~i~~l~~~~~-ipvia~----GGI~~~~d~~~~~~~Gadgv~vgsal~---------~~~~~~~~ 237 (252)
T 1ka9_F 173 SMDRDGTKEGYD-LRLTRMVAEAVG-VPVIAS----GGAGRMEHFLEAFQAGAEAALAASVFH---------FGEIPIPK 237 (252)
T ss_dssp ETTTTTTCSCCC-HHHHHHHHHHCS-SCEEEE----SCCCSHHHHHHHHHTTCSEEEESHHHH---------TTSSCHHH
T ss_pred cccCCCCcCCCC-HHHHHHHHHHcC-CCEEEe----CCCCCHHHHHHHHHCCCHHHHHHHHHH---------cCCCCHHH
Confidence 43 34332212 456677777553 344332 2333 3677777788988653321111 22347889
Q ss_pred HHHHHHhCCCCCcc
Q 015894 346 VVYMLNGLGVRTNV 359 (398)
Q Consensus 346 vv~~L~~~Gi~t~i 359 (398)
+...|++.|+....
T Consensus 238 ~~~~l~~~~~~~~~ 251 (252)
T 1ka9_F 238 LKRYLAEKGVHVRL 251 (252)
T ss_dssp HHHHHHHTTCCBCC
T ss_pred HHHHHHHCCCCcCC
Confidence 99999988885443
No 96
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=95.27 E-value=1.8 Score=40.14 Aligned_cols=197 Identities=11% Similarity=0.019 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHH---hcc-CCcEEEEeCCH-h---------h----HHH
Q 015894 119 VVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ---NVE-GARFPVLTPNL-K---------G----FEA 180 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~---~~~-~~~l~~l~~n~-~---------~----ie~ 180 (398)
++.++-++.+.+.|.|.||+-...-.. .+.+.+.+.++ +.. +..+..-.|.. + . ++.
T Consensus 17 ~e~~~~~~~~~~~~~D~vElRvD~l~~-----~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~ 91 (238)
T 1sfl_A 17 EETLIQKINHRIDAIDVLELRIDQFEN-----VTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISD 91 (238)
T ss_dssp -CHHHHHHHHTTTTCSEEEEECTTSTT-----CCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCCCEEEEEeccccc-----CCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHHHH
Confidence 444555666778899999997532111 13455554444 322 33443333421 1 1 355
Q ss_pred HHHc-CCCEEEEeccC--chHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 015894 181 AVAA-GAKEVAIFASA--SESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQL 257 (398)
Q Consensus 181 a~~~-Gv~~v~i~~~~--Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l 257 (398)
+++. +++.|.|-... .+ +.+.++++.+++.|..+-+..=. | ....+.+.+....+++
T Consensus 92 ~~~~~~~d~iDvEl~~~~~~---------------~~~~~l~~~~~~~~~kvI~S~Hd-f----~~tp~~~el~~~~~~~ 151 (238)
T 1sfl_A 92 LANINGIDMIDIEWQADIDI---------------EKHQRIITHLQQYNKEVIISHHN-F----ESTPPLDELQFIFFKM 151 (238)
T ss_dssp GGGCTTCCEEEEECCTTSCH---------------HHHHHHHHHHHHTTCEEEEEEEE-S----SCCCCHHHHHHHHHHH
T ss_pred HHHhCCCCEEEEEccCCCCh---------------HHHHHHHHHHHhcCCEEEEEecC-C----CCCcCHHHHHHHHHHH
Confidence 6666 58999987654 22 23446678888888877532221 1 1222357889999999
Q ss_pred HhCCCCEEEEccCcCcCCHHHHHHHHHHHHhh--CCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCC
Q 015894 258 YDMGCSEISLGDTIGVGTPGTVIPMLEAVLDA--VPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAK 335 (398)
Q Consensus 258 ~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~--~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~ 335 (398)
.++|||.+-|+=+. -++.++..+++...+. .+..|+-.- +.-.+|.-.-+.+-..|-...-+++.. ..
T Consensus 152 ~~~gaDivKia~~a--~~~~D~l~ll~~~~~~~~~~~~P~I~~--~MG~~G~~SRi~~~~~GS~~tf~~l~~-~s----- 221 (238)
T 1sfl_A 152 QKFNPEYVKLAVMP--HNKNDVLNLLQAMSTFSDTMDCKVVGI--SMSKLGLISRTAQGVFGGALTYGCIGE-PQ----- 221 (238)
T ss_dssp HTTCCSEEEEEECC--SSHHHHHHHHHHHHHHHHHCSSEEEEE--ECTGGGHHHHHTGGGGTBCEEEEBSSC-CS-----
T ss_pred HHcCCCEEEEEecC--CCHHHHHHHHHHHHHHhhcCCCCEEEE--ECCCCchHHHHHHHHhCCCeeecCCCC-CC-----
Confidence 99999999888764 3478888888766542 233344332 233344556666667788888887742 23
Q ss_pred CCCCCccHHHHHHHHH
Q 015894 336 GASGNVATEDVVYMLN 351 (398)
Q Consensus 336 graGNa~lE~vv~~L~ 351 (398)
..|+.+.+++...|+
T Consensus 222 -APGQl~~~el~~~l~ 236 (238)
T 1sfl_A 222 -APGQIDVTDLKAQVT 236 (238)
T ss_dssp -STTCCBHHHHHHHHT
T ss_pred -CCCCCCHHHHHHHHH
Confidence 456999999987764
No 97
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=95.23 E-value=0.62 Score=45.17 Aligned_cols=186 Identities=11% Similarity=0.053 Sum_probs=122.5
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHH---hccCCcEEEEe---CCHhhHHHHHHc----
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ---NVEGARFPVLT---PNLKGFEAAVAA---- 184 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~---~~~~~~l~~l~---~n~~~ie~a~~~---- 184 (398)
....+....++++-.+.+-+.|=-.+...-++.+ . .+...++ +-.++.+.... .+.+.+..++++
T Consensus 34 v~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g---~--~~~~~~~~~A~~~~VPVaLHlDHg~~~e~i~~ai~~~~~~ 108 (306)
T 3pm6_A 34 VYNLEGILAIIRAAEHKRSPAMILLFPWAIQYAD---S--LLVRTAASACRAASVPITLHLDHAQDPEIIKRAADLSRSE 108 (306)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHT---T--HHHHHHHHHHHHCSSCEEEEEEEECCHHHHHHHHHTC---
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhcc---H--HHHHHHHHHHHHCCCCEEEEcCCCCCHHHHHHHHHhhhhc
Confidence 4678888899999999999977654432111111 0 1122222 12344444433 467789999998
Q ss_pred ----CCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC---------CCCCHHHHH
Q 015894 185 ----GAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE---------GMVPPSKVA 251 (398)
Q Consensus 185 ----Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~---------~r~~~~~l~ 251 (398)
|...|.+=.| ..+.+|+++.-++++++|++.|+.|++.|-..-|.+|. -.++|+...
T Consensus 109 ~~~~GFtSVMiDgS----------~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~~~~~~~~~yT~Peea~ 178 (306)
T 3pm6_A 109 THEPGFDSIMVDMS----------HFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESE 178 (306)
T ss_dssp ---CCCSEEEECCT----------TSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHH
T ss_pred cCCCCCCEEEEeCC----------CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccCCCHHHHH
Confidence 9988877332 13578999999999999999999999877665444432 247898887
Q ss_pred HHHHHHHhCCCCEEEEccCcC----cCCH---HHHHHHHHHHHhhC-CCCeEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 252 YVSKQLYDMGCSEISLGDTIG----VGTP---GTVIPMLEAVLDAV-PVDKLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 252 ~~a~~l~~~Gad~I~L~DT~G----~~~P---~~v~~lv~~l~~~~-p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
+++ +.|+|.+ +=++| .-.| .==.++++.+++.+ +++||.+|+= -|..-.....|+..|+.-|+.
T Consensus 179 ~Fv----~TgvD~L--AvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGg--SG~p~e~i~~ai~~GV~KiNi 250 (306)
T 3pm6_A 179 EFV----ATGINWL--APAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGA--DPFTKEIFEKCIERGVAKVNV 250 (306)
T ss_dssp HHH----TTTCSEE--CCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSC--TTCCHHHHHHHHHTTEEEEEE
T ss_pred HHH----HcCCCEE--EEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCC--CCCCHHHHHHHHHcCCeEEEe
Confidence 766 4899953 33333 3222 22245567777766 3678888765 467778899999999876543
No 98
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=95.20 E-value=0.82 Score=43.58 Aligned_cols=143 Identities=13% Similarity=0.146 Sum_probs=91.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCc---ccCCCCHHHHHHHHHhccCCc-EEEEe--C---CHhhHHHHHHcC
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKW---VPQLADAKDVMAAIQNVEGAR-FPVLT--P---NLKGFEAAVAAG 185 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~---~p~~~D~~~v~~~i~~~~~~~-l~~l~--~---n~~~ie~a~~~G 185 (398)
..+.++.++-++.|.+.|+..|-+.......+ .|...+..++++.+++.++.. +.... + +.+-++...++|
T Consensus 32 ~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~~ir~~~~~p~~l~~e~l~~l~~~g 111 (304)
T 2qgq_A 32 SRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISAMLELD 111 (304)
T ss_dssp BCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTSSSSCEEEECCCCGGGCCHHHHHHHHHCT
T ss_pred eeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhcCCCcEEEEeeeecccCCHHHHHHHHhCC
Confidence 46888889999999999999876642110000 011245677888887766653 22221 2 234577788899
Q ss_pred --CCEEEEec-cCchHHHhhhcCC--CHHHHHHHHHHHHHHHHh--CCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHH
Q 015894 186 --AKEVAIFA-SASESFSKSNINC--TIEDSLIRYRDVALAARE--LSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLY 258 (398)
Q Consensus 186 --v~~v~i~~-~~Sd~~~~~~~~~--s~~~~l~~~~~~v~~ak~--~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~ 258 (398)
++.+.+-+ +.|+--.+. +++ +.+ .+.+.++.+++ .|+.+..+++ +|.|.+ +.+.+.+.++.+.
T Consensus 112 ~~~~~l~i~lqs~s~~vl~~-m~r~~t~e----~~~~~i~~l~~~~~gi~i~~~~I--vG~PgE---t~ed~~~t~~~l~ 181 (304)
T 2qgq_A 112 KVVKYFDVPVQHGSDKILKL-MGRTKSSE----ELKKMLSSIRERFPDAVLRTSII--VGFPGE---TEEDFEELKQFVE 181 (304)
T ss_dssp TBCCEEECCCBCSCHHHHHH-TTCCSCHH----HHHHHHHHHHHHCTTCEEEEEEE--ECCTTC---CHHHHHHHHHHHH
T ss_pred CCccEEEEecccCCHHHHHH-hCCCCCHH----HHHHHHHHHHhhCCCCEEEEEEE--EeCCCC---CHHHHHHHHHHHH
Confidence 88888855 446654443 443 444 44456677777 6888776666 565644 5788888888888
Q ss_pred hCCCCEEEE
Q 015894 259 DMGCSEISL 267 (398)
Q Consensus 259 ~~Gad~I~L 267 (398)
+.+.+.+.+
T Consensus 182 ~l~~~~v~~ 190 (304)
T 2qgq_A 182 EIQFDKLGA 190 (304)
T ss_dssp HHCCSEEEE
T ss_pred HcCCCEEEE
Confidence 999886543
No 99
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=95.18 E-value=0.066 Score=50.09 Aligned_cols=166 Identities=12% Similarity=-0.000 Sum_probs=100.7
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeCCH-hhHHHHHHcCCCEEEEeccCchHHH
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNL-KGFEAAVAAGAKEVAIFASASESFS 200 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~n~-~~ie~a~~~Gv~~v~i~~~~Sd~~~ 200 (398)
.+-++.+.+.|++.+.+...- ..++|.+.--..+.+.+++..+..+-.++.+. .-++.+.++|+|.|.+..-..+
T Consensus 29 ~~~i~~~~~~gad~lhvDvmD-G~fvpn~t~G~~~v~~lr~~~~~DvhLMv~~p~~~i~~~~~aGAd~itvH~ea~~--- 104 (237)
T 3cu2_A 29 NEEVTTLLENQINVLHFDIAD-GQFSSLFTVGAIGIKYFPTHCFKDVHLMVRNQLEVAKAVVANGANLVTLQLEQYH--- 104 (237)
T ss_dssp HHHHHHHHHTTCCEEEEEEEB-SSSSSCBCBCTHHHHTSCTTSEEEEEEECSCHHHHHHHHHHTTCSEEEEETTCTT---
T ss_pred HHHHHHHHHcCCCEEEEEEec-CccccchhhhHHHHHHHhhhCCCCeEEEEECHHHHHHHHHHcCCCEEEEecCCcc---
Confidence 445788889999987664321 12233332222445555543211334445554 4478999999999877655432
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHHhC---------CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE----
Q 015894 201 KSNINCTIEDSLIRYRDVALAAREL---------SIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL---- 267 (398)
Q Consensus 201 ~~~~~~s~~~~l~~~~~~v~~ak~~---------G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L---- 267 (398)
...+.++.+++. |..+.+.+. |. ++.+.+.++. .++|.|.+
T Consensus 105 -------------~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~-----p~---Tp~~~l~~~l-----~~~D~vlvMsv~ 158 (237)
T 3cu2_A 105 -------------DFALTIEWLAKQKTTYANQVYPVLIGACLC-----PE---TPISELEPYL-----DQIDVIQLLTLD 158 (237)
T ss_dssp -------------SHHHHHHHHTTCEEEETTEEEECEEEEEEC-----TT---SCGGGGTTTT-----TTCSEEEEESEE
T ss_pred -------------cHHHHHHHHHhcccccccccCCceEEEEEe-----CC---ChHHHHHHHh-----hcCceeeeeeec
Confidence 134667888899 888765442 21 2333333332 26887754
Q ss_pred ccCcCcCCHHHHHHHHHHHHhhCC----CCeEEEEeCCccchHHHHHHHHHH--hCCCEE
Q 015894 268 GDTIGVGTPGTVIPMLEAVLDAVP----VDKLAVHFHDTYGQALSNILASLQ--MGISTV 321 (398)
Q Consensus 268 ~DT~G~~~P~~v~~lv~~l~~~~p----~~~l~~H~Hnd~GlA~ANalaAl~--aGa~~V 321 (398)
+-..|...+....+.++.+++..+ ..+|++ |-|.-..|+-..++ +||+.+
T Consensus 159 pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~v----dGGI~~~~~~~~~~~~aGad~~ 214 (237)
T 3cu2_A 159 PRNGTKYPSELILDRVIQVEKRLGNRRVEKLINI----DGSMTLELAKYFKQGTHQIDWL 214 (237)
T ss_dssp TTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEE----ESSCCHHHHHHHHHSSSCCCCE
T ss_pred cCcCCeecChhHHHHHHHHHHHHHhcCCCceEEE----ECCcCHHHHHHHHHhCCCCcEE
Confidence 233344445666777777777653 345655 77888899999999 999855
No 100
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=95.11 E-value=0.26 Score=51.72 Aligned_cols=190 Identities=12% Similarity=0.042 Sum_probs=111.2
Q ss_pred EeCC----CcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHh---ccCCcEEEEeC
Q 015894 101 VEVG----PRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQN---VEGARFPVLTP 173 (398)
Q Consensus 101 ~D~T----LRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~---~~~~~l~~l~~ 173 (398)
+.+| ++||.+. .+.+..++.++.+.+.|.+.|++|.... .....+++.+.++. ..++.++.=+.
T Consensus 322 ~N~Tg~dsf~~~~~~----~~~~~a~~~A~~~v~~GAdiIDIgpg~~-----~v~~~ee~~rvv~~i~~~~~vpisIDT~ 392 (566)
T 1q7z_A 322 INPAGRKKLWAEMQK----GNEEIVIKEAKTQVEKGAEVLDVNFGIE-----SQIDVRYVEKIVQTLPYVSNVPLSLDIQ 392 (566)
T ss_dssp ECCTTCHHHHHHHHT----TCCHHHHHHHHHHHHTTCSEEEEECSSG-----GGSCHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred ecCCCChhHHHHhhc----CCHHHHHHHHHHHHHCCCCEEEECCCCC-----CCCHHHHHHHHHHHHHhhCCceEEEeCC
Confidence 4466 7777764 4568889999999999999999994221 12344555555543 23566666667
Q ss_pred CHhhHHHHHHc--CCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeec-CCCCCCCC--HH
Q 015894 174 NLKGFEAAVAA--GAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVG-CPVEGMVP--PS 248 (398)
Q Consensus 174 n~~~ie~a~~~--Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg-~~~~~r~~--~~ 248 (398)
+.+-+++++++ |.+.|.=.... + +++.++.+.++++|..+. ++..-+ .|.. ++ .+
T Consensus 393 ~~~v~eaal~~~~G~~iINdis~~--------------~--~~~~~~~~~~~~~g~~vV--~m~~~~~~p~t--~~~~~~ 452 (566)
T 1q7z_A 393 NVDLTERALRAYPGRSLFNSAKVD--------------E--EELEMKINLLKKYGGTLI--VLLMGKDVPKS--FEERKE 452 (566)
T ss_dssp CHHHHHHHHHHCSSCCEEEEEESC--------------H--HHHHHHHHHHHHHCCEEE--EESCSSSCCCS--HHHHHH
T ss_pred CHHHHHHHHHhcCCCCEEEECCcc--------------h--hhHHHHHHHHHHhCCeEE--EEeCCCCCcCC--HHHHHH
Confidence 78888999998 98876532211 1 334566778889998664 343211 1111 11 35
Q ss_pred HHHHHHHHHHhCCC-CEEEE---ccCcCcCCHHHHHHHHHHHHhh--CCCCeEEEEeCC-------ccchHHHHHHHHHH
Q 015894 249 KVAYVSKQLYDMGC-SEISL---GDTIGVGTPGTVIPMLEAVLDA--VPVDKLAVHFHD-------TYGQALSNILASLQ 315 (398)
Q Consensus 249 ~l~~~a~~l~~~Ga-d~I~L---~DT~G~~~P~~v~~lv~~l~~~--~p~~~l~~H~Hn-------d~GlA~ANalaAl~ 315 (398)
++.+.++.+.++|+ +.|.| ..++|... +-.++++.++.. . +.|+-+=..| +-.+.-.-+..|+.
T Consensus 453 ~l~~~~~~a~~~Gi~~~IilDPg~~~igfgk--~~~~~l~~~~~~~~~-g~p~l~G~Snksf~~~~~~~l~~t~a~~a~~ 529 (566)
T 1q7z_A 453 YFEKALKILERHDFSDRVIFDPGVLPLGAEG--KPVEVLKTIEFISSK-GFNTTVGLSNLSFGLPDRSYYNTAFLVLGIS 529 (566)
T ss_dssp HHHHHHHHHHHTTCGGGEEEECCCCCTTTTC--CHHHHHHHHHHHHHT-TCEECCBGGGGSTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCcEEEeCCCCcccCcH--HHHHHHHHHHHHHhC-CCCEEEEeCcccccCCHHHHHHHHHHHHHHH
Confidence 66667778888999 45543 33446666 444455554421 1 2222221211 22233333356788
Q ss_pred hCCCEEe
Q 015894 316 MGISTVD 322 (398)
Q Consensus 316 aGa~~VD 322 (398)
+|++++=
T Consensus 530 ~G~~i~r 536 (566)
T 1q7z_A 530 KGLSSAI 536 (566)
T ss_dssp TTCCEEE
T ss_pred cCCCEEE
Confidence 8988663
No 101
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=95.08 E-value=1.8 Score=41.92 Aligned_cols=147 Identities=13% Similarity=0.126 Sum_probs=96.3
Q ss_pred CCcEEEEe-CCHhhHHHHHHcCCCEEEEec-cCchHHHhhhc-CCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC
Q 015894 165 GARFPVLT-PNLKGFEAAVAAGAKEVAIFA-SASESFSKSNI-NCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV 241 (398)
Q Consensus 165 ~~~l~~l~-~n~~~ie~a~~~Gv~~v~i~~-~~Sd~~~~~~~-~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~ 241 (398)
+-.+.++. .+.-..+.+.++|++.|.+.. +++-.+-..-. ..|.++.+..++.+.+.+ ...|.+.+ |.
T Consensus 28 ~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~---~~pviaD~------d~ 98 (305)
T 3ih1_A 28 NEILQIPGAHDAMAALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRAT---DLPVLVDI------DT 98 (305)
T ss_dssp SSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHH---CCCEEEEC------TT
T ss_pred CCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhc---CCCEEEEC------CC
Confidence 34455554 344455566779999988864 44433221111 347899998887777654 35554322 22
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEccCcC-----------cCCHHHHHHHHHHHHhhCCCCeEEEEeCC----ccchH
Q 015894 242 EGMVPPSKVAYVSKQLYDMGCSEISLGDTIG-----------VGTPGTVIPMLEAVLDAVPVDKLAVHFHD----TYGQA 306 (398)
Q Consensus 242 ~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~p~~~l~~H~Hn----d~GlA 306 (398)
. --+++.+.+.++.+.++|+..|.|-|..+ +..+.++.+.|+++++.-++..|-.-+-. ..--+
T Consensus 99 G-yg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~a 177 (305)
T 3ih1_A 99 G-FGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEA 177 (305)
T ss_dssp C-SSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHH
T ss_pred C-CCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHH
Confidence 2 23578888899999999999999999874 34456788888888887444333333222 14468
Q ss_pred HHHHHHHHHhCCCEE
Q 015894 307 LSNILASLQMGISTV 321 (398)
Q Consensus 307 ~ANalaAl~aGa~~V 321 (398)
+.-+.+..+|||+.|
T Consensus 178 i~Ra~ay~eAGAD~i 192 (305)
T 3ih1_A 178 IERANAYVKAGADAI 192 (305)
T ss_dssp HHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEE
Confidence 889999999999965
No 102
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=95.06 E-value=0.38 Score=43.28 Aligned_cols=171 Identities=13% Similarity=0.121 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE--EeCCH-hhHHHHHHcCCCEEEEeccC
Q 015894 119 VVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV--LTPNL-KGFEAAVAAGAKEVAIFASA 195 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~--l~~n~-~~ie~a~~~Gv~~v~i~~~~ 195 (398)
....+.++.+.++|++.+++...-.+ +.+......+..+.+++..+..+.+ ++.+. +.++.+.++|++.|.+....
T Consensus 16 ~~~~~~~~~~~~~G~~~i~~~~~dg~-~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~ 94 (220)
T 2fli_A 16 ANFASELARIEETDAEYVHIDIMDGQ-FVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTES 94 (220)
T ss_dssp GGHHHHHHHHHHTTCCEEEEEEEBSS-SSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHHHHcCCCEEEEEeecCC-CCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCc
Confidence 45567889999999999887642211 0111122134555566443443333 33554 35899999999999886543
Q ss_pred chHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcC---
Q 015894 196 SESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIG--- 272 (398)
Q Consensus 196 Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G--- 272 (398)
.+ .....++.+++.|..+...+. + .++.+.+..+ ..++|.|.+ |+++
T Consensus 95 ~~----------------~~~~~~~~~~~~g~~i~~~~~-----~---~t~~e~~~~~-----~~~~d~vl~-~~~~~g~ 144 (220)
T 2fli_A 95 TR----------------HIHGALQKIKAAGMKAGVVIN-----P---GTPATALEPL-----LDLVDQVLI-MTVNPGF 144 (220)
T ss_dssp CS----------------CHHHHHHHHHHTTSEEEEEEC-----T---TSCGGGGGGG-----TTTCSEEEE-ESSCTTC
T ss_pred cc----------------cHHHHHHHHHHcCCcEEEEEc-----C---CCCHHHHHHH-----HhhCCEEEE-EEECCCC
Confidence 22 123455666777877543321 1 1223322222 245786643 4332
Q ss_pred --cCCHHHHHHHHHHHHhhCC----CCeEEEEeCCccchHHHHHHHHHHhCCCEEeec
Q 015894 273 --VGTPGTVIPMLEAVLDAVP----VDKLAVHFHDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 273 --~~~P~~v~~lv~~l~~~~p----~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
...+....+.++.+++..+ ..++.+ +-|....|.-.++++|++.|.+.
T Consensus 145 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v----~GGI~~~~~~~~~~~Gad~vvvG 198 (220)
T 2fli_A 145 GGQAFIPECLEKVATVAKWRDEKGLSFDIEV----DGGVDNKTIRACYEAGANVFVAG 198 (220)
T ss_dssp SSCCCCGGGHHHHHHHHHHHHHTTCCCEEEE----ESSCCTTTHHHHHHHTCCEEEES
T ss_pred cccccCHHHHHHHHHHHHHHHhcCCCceEEE----ECcCCHHHHHHHHHcCCCEEEEC
Confidence 2222223334555554331 344544 34555578888888999988876
No 103
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=95.06 E-value=0.4 Score=44.57 Aligned_cols=189 Identities=13% Similarity=0.094 Sum_probs=100.5
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcccCC--CCHHHHHHHHHhccCCcEEE-EeC----C-----H-----------hhH
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWVPQL--ADAKDVMAAIQNVEGARFPV-LTP----N-----L-----------KGF 178 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~p~~--~D~~~v~~~i~~~~~~~l~~-l~~----n-----~-----------~~i 178 (398)
.+.++.+.++|++.||+.... .+.+ .+.+++.+.+++ .++++.+ ..+ + . +.+
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~~~~~~l~~-~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i 94 (294)
T 3vni_A 20 KYYIEKVAKLGFDILEIAASP----LPFYSDIQINELKACAHG-NGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLL 94 (294)
T ss_dssp HHHHHHHHHHTCSEEEEESTT----GGGCCHHHHHHHHHHHHH-TTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCcc----cCCcCHHHHHHHHHHHHH-cCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHH
Confidence 567777889999999998532 1112 122333333332 3566655 222 1 1 124
Q ss_pred HHHHHcCCCEEEEecc-Cch-HHHhhhcCCCH----HHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHH
Q 015894 179 EAAVAAGAKEVAIFAS-ASE-SFSKSNINCTI----EDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAY 252 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~-~Sd-~~~~~~~~~s~----~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~ 252 (398)
+.|.+.|++.|.+.+. ... .+ .-+.+. +...+.+.++.++|++.|+.+. +...-..+...-.+++.+.+
T Consensus 95 ~~a~~lG~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lEn~~~~~~~~~~~~~~~~~ 169 (294)
T 3vni_A 95 KRLYKLDVHLIGGALYSYWPIDY---TKTIDKKGDWERSVESVREVAKVAEACGVDFC--LEVLNRFENYLINTAQEGVD 169 (294)
T ss_dssp HHHHHHTCCEEEESTTSCSSCCT---TSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEE--EECCCTTTCSSCCSHHHHHH
T ss_pred HHHHHhCCCeeeccccCCCCCcC---CCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEE--EEecCcccCcccCCHHHHHH
Confidence 5677789999985322 110 00 001233 4455666778888999998764 32110001111236677777
Q ss_pred HHHHHHhCCCCEEE-EccCcCcCCH-HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCC
Q 015894 253 VSKQLYDMGCSEIS-LGDTIGVGTP-GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGG 330 (398)
Q Consensus 253 ~a~~l~~~Gad~I~-L~DT~G~~~P-~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGe 330 (398)
+++.+ +.+.+. .-||.=...- ....+.++.+. + --.++|++|...
T Consensus 170 l~~~v---~~~~vg~~~D~~h~~~~g~d~~~~l~~~~---~-~i~~vHl~D~~r-------------------------- 216 (294)
T 3vni_A 170 FVKQV---DHNNVKVMLDTFHMNIEEDSIGGAIRTAG---S-YLGHLHTGECNR-------------------------- 216 (294)
T ss_dssp HHHHH---CCTTEEEEEEHHHHHHHCSCHHHHHHHHG---G-GEEEEEECCTTS--------------------------
T ss_pred HHHHc---CCCCEEEEEEhhhhHHcCCCHHHHHHHhh---h-hEeEEEeCCCCC--------------------------
Confidence 66544 433232 3354211111 12333333332 2 247899999521
Q ss_pred CCCCCCCCCCccHHHHHHHHHhCCCC
Q 015894 331 CPYAKGASGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 331 cp~a~graGNa~lE~vv~~L~~~Gi~ 356 (398)
+ .| +.|..+.+.++..|++.|++
T Consensus 217 ~--~p-G~G~id~~~~~~~L~~~gy~ 239 (294)
T 3vni_A 217 K--VP-GRGRIPWVEIGEALADIGYN 239 (294)
T ss_dssp C--CT-TSSSCCHHHHHHHHHHTTCC
T ss_pred C--CC-CCCCcCHHHHHHHHHHhCCC
Confidence 0 12 37899999999999987765
No 104
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=95.04 E-value=0.62 Score=46.55 Aligned_cols=178 Identities=13% Similarity=0.115 Sum_probs=112.9
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEecCCCCCcccC-CC-CHHHHHHHHHhc---cCCcEEEEeCCHhhHHHHHHcCCCEEEE
Q 015894 117 PAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQ-LA-DAKDVMAAIQNV---EGARFPVLTPNLKGFEAAVAAGAKEVAI 191 (398)
Q Consensus 117 ~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~-~~-D~~~v~~~i~~~---~~~~l~~l~~n~~~ie~a~~~Gv~~v~i 191 (398)
+.++-+++++.+.++|.+.|-.+.|- |+..|. +. -.++-+..+++. .++.+..=......++.+.+. ++.+.|
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fk-prts~~~f~gl~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~lkI 231 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFK-PRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDY-VDVIQI 231 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSC-CCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTT-CSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCeEEccccc-CCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhh-CCEEEE
Confidence 78889999999999999999988763 211111 10 012223333322 244444333577788888777 999888
Q ss_pred eccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHhCCCCEEEEccC
Q 015894 192 FASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGM-VPPSKVAYVSKQLYDMGCSEISLGDT 270 (398)
Q Consensus 192 ~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r-~~~~~l~~~a~~l~~~Gad~I~L~DT 270 (398)
-.... +. .+.++++.+.|.+|. ++ .+. .+++++...++.+.+.|.+.|.|+.-
T Consensus 232 gs~~~----------~n-------~~LL~~~a~~gkPVi--lk-------~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~r 285 (385)
T 3nvt_A 232 GARNM----------QN-------FELLKAAGRVDKPIL--LK-------RGLSATIEEFIGAAEYIMSQGNGKIILCER 285 (385)
T ss_dssp CGGGT----------TC-------HHHHHHHHTSSSCEE--EE-------CCTTCCHHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred Ccccc----------cC-------HHHHHHHHccCCcEE--Ee-------cCCCCCHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 54311 11 145567778899886 33 123 68999999999999999987877774
Q ss_pred --cCcCC-H-HHHH-HHHHHHHhhCCCCeE-EEEeCC--ccchHHHHHHHHHHhCCC--EEee
Q 015894 271 --IGVGT-P-GTVI-PMLEAVLDAVPVDKL-AVHFHD--TYGQALSNILASLQMGIS--TVDS 323 (398)
Q Consensus 271 --~G~~~-P-~~v~-~lv~~l~~~~p~~~l-~~H~Hn--d~GlA~ANalaAl~aGa~--~VD~ 323 (398)
..+-+ | ..+. ..+..+++.+. .|+ .=|.|. +..+...-+++|+.+||+ +|+.
T Consensus 286 G~s~yp~~~~~~ldl~~i~~lk~~~~-lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~ 347 (385)
T 3nvt_A 286 GIRTYEKATRNTLDISAVPILKKETH-LPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEV 347 (385)
T ss_dssp CBCCSCCSSSSBCCTTHHHHHHHHBS-SCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEB
T ss_pred CCCCCCCCCccccCHHHHHHHHHhcC-CCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEe
Confidence 32211 2 2221 12555666542 334 447775 355667789999999999 8876
No 105
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=95.01 E-value=0.2 Score=46.50 Aligned_cols=164 Identities=12% Similarity=0.085 Sum_probs=98.5
Q ss_pred HHHHHHHHHhcCCCEE--EE--ecCCCCCcccCCCCHHHHHHHHHhc-cCCcEEEE--eCCHhh-HHHHHHcCCCEEEEe
Q 015894 121 KVELIKLLVSSGLAVV--EA--TSFVSPKWVPQLADAKDVMAAIQNV-EGARFPVL--TPNLKG-FEAAVAAGAKEVAIF 192 (398)
Q Consensus 121 k~~ia~~L~~aGv~~I--Ev--G~~~~~~~~p~~~D~~~v~~~i~~~-~~~~l~~l--~~n~~~-ie~a~~~Gv~~v~i~ 192 (398)
-.+-++.+.++|++.+ ++ |.|+ |.+.--..+.+.+|+. |+..+-+. +.+... ++..++ ++.+.+.
T Consensus 20 l~~~i~~~~~~g~d~iHvDvmDg~fv-----pn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~--Ad~itvH 92 (227)
T 1tqx_A 20 LAEETQRMESLGAEWIHLDVMDMHFV-----PNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKT--SNQLTFH 92 (227)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEBSSSS-----SCBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTT--SSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEEEeCCcC-----cchhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHh--CCEEEEe
Confidence 3456677788899974 44 4444 3333223567777754 36655553 344332 333334 7877776
Q ss_pred ccCchHHHhhhcCCCHHHHHHHHHHHHH---HHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCC-CCEEEE-
Q 015894 193 ASASESFSKSNINCTIEDSLIRYRDVAL---AARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMG-CSEISL- 267 (398)
Q Consensus 193 ~~~Sd~~~~~~~~~s~~~~l~~~~~~v~---~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~G-ad~I~L- 267 (398)
.-..+. .+.+.++ .+|++|.++.+.+. |. ++.+. ++.+.++| +|.|.+
T Consensus 93 ~ea~~~---------------~~~~~i~~~~~i~~~G~k~gvaln-----p~---tp~~~----~~~~l~~g~~D~Vlvm 145 (227)
T 1tqx_A 93 FEALNE---------------DTERCIQLAKEIRDNNLWCGISIK-----PK---TDVQK----LVPILDTNLINTVLVM 145 (227)
T ss_dssp GGGGTT---------------CHHHHHHHHHHHHTTTCEEEEEEC-----TT---SCGGG----GHHHHTTTCCSEEEEE
T ss_pred ecCCcc---------------CHHHHHHHHHHHHHcCCeEEEEeC-----CC---CcHHH----HHHHhhcCCcCEEEEe
Confidence 544321 1234556 88999999875443 21 23333 33445565 888732
Q ss_pred ---ccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEe
Q 015894 268 ---GDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVD 322 (398)
Q Consensus 268 ---~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD 322 (398)
+-..|...+....+.++.+++..++.+|.+ |-|....|+-.++++||+.+=
T Consensus 146 sV~pGf~gq~f~~~~l~ki~~lr~~~~~~~I~V----dGGI~~~ti~~~~~aGAd~~V 199 (227)
T 1tqx_A 146 TVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQV----DGGLNIETTEISASHGANIIV 199 (227)
T ss_dssp SSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEEE----ESSCCHHHHHHHHHHTCCEEE
T ss_pred eeccCCCCcccchHHHHHHHHHHHhccCCeEEE----ECCCCHHHHHHHHHcCCCEEE
Confidence 233354445667777888888776555655 667777899999999999663
No 106
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=95.00 E-value=0.75 Score=42.22 Aligned_cols=206 Identities=13% Similarity=0.070 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEE--eCCHhhHHHHHHcCCCEEEEeccCc
Q 015894 119 VVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVL--TPNLKGFEAAVAAGAKEVAIFASAS 196 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l--~~n~~~ie~a~~~Gv~~v~i~~~~S 196 (398)
.+-.++++.+.++|++.|.+--..... .......+.++.+++..++.+.+. .++.++++.++++|++.|.+-..
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~--~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~-- 105 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASV--EKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTA-- 105 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSS--SHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHH--
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhh--cCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChH--
Confidence 356789999999999998875322110 000011233344443334555443 25778899999999999977422
Q ss_pred hHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC-cEEEEEeeee--c---CCCCCCC--CHHHHHHHHHHHHhCCCCEEEEc
Q 015894 197 ESFSKSNINCTIEDSLIRYRDVALAARELSI-PVRGYLSCVV--G---CPVEGMV--PPSKVAYVSKQLYDMGCSEISLG 268 (398)
Q Consensus 197 d~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~-~v~~~l~~~f--g---~~~~~r~--~~~~l~~~a~~l~~~Gad~I~L~ 268 (398)
.+.....+.+..+..|. .+...+..-. | ....+.. +.....+.++.+.+.|++.|.+-
T Consensus 106 --------------~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~ 171 (253)
T 1thf_D 106 --------------AVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLT 171 (253)
T ss_dssp --------------HHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEE
T ss_pred --------------HHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCCCCEEEEE
Confidence 11111112222333342 1211122100 0 0001110 00123456677788999988876
Q ss_pred cC--cCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH-HHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHH
Q 015894 269 DT--IGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA-LSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATED 345 (398)
Q Consensus 269 DT--~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA-~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~ 345 (398)
++ .|...... .++++.+++..+ +|+-.= -|.. ..++..+.++||+.|=+.-.=++ +....++
T Consensus 172 ~~~~~g~~~g~~-~~~~~~l~~~~~-ipvia~----GGI~~~~d~~~~~~~Gadgv~vGsal~~---------~~~~~~~ 236 (253)
T 1thf_D 172 SIDRDGTKSGYD-TEMIRFVRPLTT-LPIIAS----GGAGKMEHFLEAFLAGADAALAASVFHF---------REIDVRE 236 (253)
T ss_dssp ETTTTTSCSCCC-HHHHHHHGGGCC-SCEEEE----SCCCSHHHHHHHHHTTCSEEEESHHHHT---------TCSCHHH
T ss_pred eccCCCCCCCCC-HHHHHHHHHhcC-CCEEEE----CCCCCHHHHHHHHHcCChHHHHHHHHHc---------CCCCHHH
Confidence 43 23332221 445666666543 344442 3444 37777778899986643211111 1226889
Q ss_pred HHHHHHhCCCCC
Q 015894 346 VVYMLNGLGVRT 357 (398)
Q Consensus 346 vv~~L~~~Gi~t 357 (398)
.+..|++.|++.
T Consensus 237 ~~~~l~~~g~~~ 248 (253)
T 1thf_D 237 LKEYLKKHGVNV 248 (253)
T ss_dssp HHHHHHHTTCCC
T ss_pred HHHHHHHcCCcc
Confidence 999998888743
No 107
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=94.95 E-value=1 Score=43.29 Aligned_cols=181 Identities=13% Similarity=0.096 Sum_probs=108.8
Q ss_pred CHHHHHHHHHHHHhcC----CCEEEEecCCC-CCccc-CCC--CHHHHHHHHHhc---cCCcEEEEeCCHhhHHHHHHcC
Q 015894 117 PAVVKVELIKLLVSSG----LAVVEATSFVS-PKWVP-QLA--DAKDVMAAIQNV---EGARFPVLTPNLKGFEAAVAAG 185 (398)
Q Consensus 117 ~~~~k~~ia~~L~~aG----v~~IEvG~~~~-~~~~p-~~~--D~~~v~~~i~~~---~~~~l~~l~~n~~~ie~a~~~G 185 (398)
+.++.+++++.|.++| +..+=-++|-- |+--| .+. ..++=++.+++. .+..+..=......++.+.+.
T Consensus 32 ~~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~- 110 (285)
T 3sz8_A 32 SLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARFGVPVITDVHEAEQAAPVAEI- 110 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTT-
T ss_pred CHHHHHHHHHHHHHHHHhheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh-
Confidence 7888899999998764 66555554431 22222 111 222333444422 244444333567788888787
Q ss_pred CCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHhCCCCE
Q 015894 186 AKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGM-VPPSKVAYVSKQLYDMGCSE 264 (398)
Q Consensus 186 v~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r-~~~~~l~~~a~~l~~~Gad~ 264 (398)
++.+.|-.. + +... +..+++.+.|.+|- +. .+. .+++++...++.+.+.|.+.
T Consensus 111 vd~lqIgA~--~--------~~n~-------~LLr~va~~gkPVi--lK-------~G~~~t~~ei~~ave~i~~~Gn~~ 164 (285)
T 3sz8_A 111 ADVLQVPAF--L--------ARQT-------DLVVAIAKAGKPVN--VK-------KPQFMSPTQLKHVVSKCGEVGNDR 164 (285)
T ss_dssp CSEEEECGG--G--------TTCH-------HHHHHHHHTSSCEE--EE-------CCTTSCGGGTHHHHHHHHHTTCCC
T ss_pred CCEEEECcc--c--------cCCH-------HHHHHHHccCCcEE--Ee-------CCCCCCHHHHHHHHHHHHHcCCCc
Confidence 999888532 1 1111 23445556788875 33 122 47888888999999999988
Q ss_pred EEEccCcCcC-CHH---HHHHHHHHHHhhCCCCeEEE-EeCCc----------cc---hHHHHHHHHHHhCCC--EEeec
Q 015894 265 ISLGDTIGVG-TPG---TVIPMLEAVLDAVPVDKLAV-HFHDT----------YG---QALSNILASLQMGIS--TVDSS 324 (398)
Q Consensus 265 I~L~DT~G~~-~P~---~v~~lv~~l~~~~p~~~l~~-H~Hnd----------~G---lA~ANalaAl~aGa~--~VD~S 324 (398)
|.|+.-.-.. .+. ++ ..+..+++.+|+.|+.+ ..|-. .| +...-++||+.+||+ +|+.=
T Consensus 165 i~L~erg~~y~~~~~~vdl-~~i~~lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H 243 (285)
T 3sz8_A 165 VMLCERGSSFGYDNLVVDM-LGFRQMAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAH 243 (285)
T ss_dssp EEEEECCEECSSSCEECCT-THHHHHHHHTTSCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEE
T ss_pred EEEEeCCCCCCCCcCccCH-HHHHHHHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEec
Confidence 8887643322 111 12 23566788887678988 77752 23 347778999999999 77654
Q ss_pred c
Q 015894 325 V 325 (398)
Q Consensus 325 v 325 (398)
.
T Consensus 244 ~ 244 (285)
T 3sz8_A 244 P 244 (285)
T ss_dssp S
T ss_pred c
Confidence 3
No 108
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=94.84 E-value=0.76 Score=42.05 Aligned_cols=173 Identities=16% Similarity=0.110 Sum_probs=94.8
Q ss_pred HHHHHHHHHHhcCCCEEEEe----cCCCCCcccCCCCHHHHHHHHHhccCCcEEEE--eCCHhhHHHHHHcCCCEEEEec
Q 015894 120 VKVELIKLLVSSGLAVVEAT----SFVSPKWVPQLADAKDVMAAIQNVEGARFPVL--TPNLKGFEAAVAAGAKEVAIFA 193 (398)
Q Consensus 120 ~k~~ia~~L~~aGv~~IEvG----~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l--~~n~~~ie~a~~~Gv~~v~i~~ 193 (398)
+-.++++.+.+.|++.|.+- .+.. .. .. +.++.+++..+..+.+- +++.++++.++++|++.|.+-.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~-----~~-~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~ 105 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGT-----GD-NR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGT 105 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTS-----CC-CH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcC-----CC-hH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEECc
Confidence 56788999999999999883 3321 11 22 45555554445555442 3677889999999999988742
Q ss_pred cCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeec-CCCCC--CCCHHHHHHHHHHHHhCCCCEEEEccC
Q 015894 194 SASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVG-CPVEG--MVPPSKVAYVSKQLYDMGCSEISLGDT 270 (398)
Q Consensus 194 ~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg-~~~~~--r~~~~~l~~~a~~l~~~Gad~I~L~DT 270 (398)
. .+.+...+.+..+++|..+...+..-.| -...+ ..+. ...+.++.+.+.|++.|.+-+.
T Consensus 106 ~----------------~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~-~~~e~~~~~~~~G~~~i~~~~~ 168 (244)
T 1vzw_A 106 A----------------ALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGG-DLYETLDRLNKEGCARYVVTDI 168 (244)
T ss_dssp H----------------HHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCC-BHHHHHHHHHHTTCCCEEEEEC
T ss_pred h----------------HhhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCC-CHHHHHHHHHhCCCCEEEEecc
Confidence 2 1222222333444555444333332100 00011 1111 3455677788899998887653
Q ss_pred c--CcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHH-HHHHHHHHh---CCCEEe
Q 015894 271 I--GVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQAL-SNILASLQM---GISTVD 322 (398)
Q Consensus 271 ~--G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~-ANalaAl~a---Ga~~VD 322 (398)
. |..... -.++++.+++... +|+.. +-|... .++..++++ ||+.|-
T Consensus 169 ~~~~~~~g~-~~~~~~~i~~~~~-ipvia----~GGI~~~~d~~~~~~~~~~Gadgv~ 220 (244)
T 1vzw_A 169 AKDGTLQGP-NLELLKNVCAATD-RPVVA----SGGVSSLDDLRAIAGLVPAGVEGAI 220 (244)
T ss_dssp -------CC-CHHHHHHHHHTCS-SCEEE----ESCCCSHHHHHHHHTTGGGTEEEEE
T ss_pred CcccccCCC-CHHHHHHHHHhcC-CCEEE----ECCCCCHHHHHHHHhhccCCCceee
Confidence 2 211111 2355666666543 34444 345553 777777788 877543
No 109
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=94.67 E-value=0.74 Score=42.86 Aligned_cols=226 Identities=14% Similarity=0.006 Sum_probs=110.8
Q ss_pred CCCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcc-cCCCCHHHHHHHHHhccCCcEEEE
Q 015894 93 RVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWV-PQLADAKDVMAAIQNVEGARFPVL 171 (398)
Q Consensus 93 ~~p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~-p~~~D~~~v~~~i~~~~~~~l~~l 171 (398)
++|-++-+..-|+|+. ++.+ +.++.+.++|++.||+.......+. +.--+.++ .+.++
T Consensus 14 ~~~~~~gi~~~~~~~~-------~~~~---~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~-~~~~~---------- 72 (295)
T 3cqj_A 14 SKQIPLGIYEKALPAG-------ECWL---ERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQ-RLALV---------- 72 (295)
T ss_dssp --CCCEEEEGGGSCCC-------SCHH---HHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHH-HHHHH----------
T ss_pred cccccceeeeecCCCC-------CCHH---HHHHHHHhcCCCEEEEecCCcccccCcccCCHHH-HHHHH----------
Confidence 3455677777777742 3344 4566677899999999864321000 00001111 11111
Q ss_pred eCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCC----CHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCH
Q 015894 172 TPNLKGFEAAVAAGAKEVAIFASASESFSKSNINC----TIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPP 247 (398)
Q Consensus 172 ~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~----s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~ 247 (398)
+.+.+.|+....+..+. +...++.. .+++.++.+++.++.|+++|.+..+ +. .+ .+.......
T Consensus 73 -------~~l~~~gl~i~~~~~~~---~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~-~~-~~-~~~~~~~~~ 139 (295)
T 3cqj_A 73 -------NAIVETGVRVPSMCLSA---HRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQ-LA-GY-DVYYQEANN 139 (295)
T ss_dssp -------HHHHHHCCEEEEEEEGG---GGTSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEE-EC-CC-SCSSSCCCH
T ss_pred -------HHHHHcCCeEEEEecCc---ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEE-EC-CC-CCCcCcCHH
Confidence 12334566544443221 10011111 2456788899999999999997642 21 11 110111122
Q ss_pred -------HHHHHHHHHHHhCCCCEEEEccCcC--cCCHHHHHHHHHHHHhhCCCCeEEE---EeCCccchHHHHHHHHHH
Q 015894 248 -------SKVAYVSKQLYDMGCSEISLGDTIG--VGTPGTVIPMLEAVLDAVPVDKLAV---HFHDTYGQALSNILASLQ 315 (398)
Q Consensus 248 -------~~l~~~a~~l~~~Gad~I~L~DT~G--~~~P~~v~~lv~~l~~~~p~~~l~~---H~Hnd~GlA~ANalaAl~ 315 (398)
+.+.++++.+.+.|+. |.+--..+ ..+|.++.++++.+. .|.+.+.+ |.+.. |.-....+..+.
T Consensus 140 ~~~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~l~~~v~--~~~vg~~~D~~h~~~~-g~d~~~~l~~~~ 215 (295)
T 3cqj_A 140 ETRRRFRDGLKESVEMASRAQVT-LAMEIMDYPLMNSISKALGYAHYLN--NPWFQLYPDIGNLSAW-DNDVQMELQAGI 215 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCE-EEEECCSSGGGCSHHHHHHHHHHHC--CTTEEEECBHHHHHSS-SCCHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHHHhCCE-EEEeeCCCcccCCHHHHHHHHHhcC--CCCeEEEeccchHhhc-CCCHHHHHHHhc
Confidence 2344555566667875 44433333 457787777777663 24322322 33221 222233333321
Q ss_pred hCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCC
Q 015894 316 MGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 316 aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~ 356 (398)
-=+..|+..=.--|..-..+-+.|..+.+.++..|++.|++
T Consensus 216 ~~i~~vHl~D~~~g~~~~~p~G~G~id~~~~~~~L~~~gy~ 256 (295)
T 3cqj_A 216 GHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLKQSGYC 256 (295)
T ss_dssp GGBCCEEECEEETTEEEEECTTSSSCCHHHHHHHHHHTTCC
T ss_pred cceEEEEeecCCCCccCCcCCCCCccCHHHHHHHHHHCCCc
Confidence 12445554432112100112136899999999999987764
No 110
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=94.67 E-value=3.1 Score=39.51 Aligned_cols=188 Identities=10% Similarity=0.077 Sum_probs=105.5
Q ss_pred HHHHHHHHhcCCCEEEEecCCC-CCc---ccC---------------CCCHHHHHHHHHhc-----cCCcEEE-E-eCCH
Q 015894 122 VELIKLLVSSGLAVVEATSFVS-PKW---VPQ---------------LADAKDVMAAIQNV-----EGARFPV-L-TPNL 175 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~-~~~---~p~---------------~~D~~~v~~~i~~~-----~~~~l~~-l-~~n~ 175 (398)
.+..+.+.+.|+-.|++++... +.. -|. ....+.+++.++.. ++..+.+ + ..+.
T Consensus 26 ~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~~p~~~~i~g~~~ 105 (311)
T 1jub_A 26 IEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIAGMSA 105 (311)
T ss_dssp HHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHHTCSSSCCEEEECCSSH
T ss_pred HHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCCH
Confidence 3566778999999999875321 100 010 01134444444421 1333222 2 2444
Q ss_pred hh----HHHHHHcCCC-EEEEeccCchHH-HhhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEeeeecCCCCCCCCHH
Q 015894 176 KG----FEAAVAAGAK-EVAIFASASESF-SKSNINCTIEDSLIRYRDVALAAREL-SIPVRGYLSCVVGCPVEGMVPPS 248 (398)
Q Consensus 176 ~~----ie~a~~~Gv~-~v~i~~~~Sd~~-~~~~~~~s~~~~l~~~~~~v~~ak~~-G~~v~~~l~~~fg~~~~~r~~~~ 248 (398)
++ ++++.+.|+| .|.+-++ |+.. ....++.+.+ .+.++++.+|+. +++|.+-+. ++ .+.+
T Consensus 106 ~~~~~~a~~~~~~g~d~~iein~~-~P~~~g~~~~g~~~e----~~~~iv~~vr~~~~~Pv~vKi~-----~~---~~~~ 172 (311)
T 1jub_A 106 AENIAMLKKIQESDFSGITELNLS-CPNVPGEPQLAYDFE----ATEKLLKEVFTFFTKPLGVKLP-----PY---FDLV 172 (311)
T ss_dssp HHHHHHHHHHHHSCCCSEEEEESC-CCCSSSCCCGGGCHH----HHHHHHHHHTTTCCSCEEEEEC-----CC---CSHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEecc-CCCCCCcccccCCHH----HHHHHHHHHHHhcCCCEEEEEC-----CC---CCHH
Confidence 44 4555678999 7877543 1111 1112233443 345666777665 666654332 22 3677
Q ss_pred HHHHHHHHHHhCCCCEEEEccCcC----------------------cCCH---HHHHHHHHHHHhhCC-CCeEEEEeCCc
Q 015894 249 KVAYVSKQLYDMGCSEISLGDTIG----------------------VGTP---GTVIPMLEAVLDAVP-VDKLAVHFHDT 302 (398)
Q Consensus 249 ~l~~~a~~l~~~Gad~I~L~DT~G----------------------~~~P---~~v~~lv~~l~~~~p-~~~l~~H~Hnd 302 (398)
.+.++++.+.++|+|.|.+.++.+ +..| ....+++..+++.++ .+||-.=+--.
T Consensus 173 ~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~ 252 (311)
T 1jub_A 173 HFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIE 252 (311)
T ss_dssp HHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCC
T ss_pred HHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCC
Confidence 888899999999999999988752 1011 123467888888774 56665544332
Q ss_pred cchHHHHHHHHHHhCCCEEeecc
Q 015894 303 YGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 303 ~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
.+ ..+..++.+||+.|-..-
T Consensus 253 ~~---~da~~~l~~GAd~V~vg~ 272 (311)
T 1jub_A 253 TG---QDAFEHLLCGATMLQIGT 272 (311)
T ss_dssp SH---HHHHHHHHHTCSEEEECH
T ss_pred CH---HHHHHHHHcCCCEEEEch
Confidence 22 455666778999875543
No 111
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=94.64 E-value=2 Score=39.06 Aligned_cols=199 Identities=11% Similarity=0.030 Sum_probs=106.8
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcccCCCCH---HHHHHHHHhccCCcEEEEeC----CH----hhHHHHHHcCCCEEE
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWVPQLADA---KDVMAAIQNVEGARFPVLTP----NL----KGFEAAVAAGAKEVA 190 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~---~~v~~~i~~~~~~~l~~l~~----n~----~~ie~a~~~Gv~~v~ 190 (398)
.+.++.+.++|++.||+....- |.-.+. +++.+.+++ .+.++.++.. .. +.++.|.+.|++.|.
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~~----~~~~~~~~~~~~~~~l~~-~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~ 107 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFHL----PLNSTDEQIRAFHDKCAA-HKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIV 107 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTTS----CTTCCHHHHHHHHHHHHH-TTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHhCCCEEEEecccC----CCCCCHHHHHHHHHHHHH-cCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEE
Confidence 4677888899999999985421 111123 233333332 3566655442 22 346777889999998
Q ss_pred EeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCC-CCCCCCHHHHHHHHHHHHhCCCCEEEEcc
Q 015894 191 IFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCP-VEGMVPPSKVAYVSKQLYDMGCSEISLGD 269 (398)
Q Consensus 191 i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~-~~~r~~~~~l~~~a~~l~~~Gad~I~L~D 269 (398)
+... .+.+.++.++|++.|+.+. +... .+ ...-.+++.+.++++ +.+...=..-|
T Consensus 108 ~~p~-----------------~~~l~~l~~~a~~~gv~l~--lEn~--~~~~~~~~~~~~~~~ll~---~~~p~vg~~~D 163 (257)
T 3lmz_A 108 GVPN-----------------YELLPYVDKKVKEYDFHYA--IHLH--GPDIKTYPDATDVWVHTK---DLDPRIGMCLD 163 (257)
T ss_dssp EEEC-----------------GGGHHHHHHHHHHHTCEEE--EECC--CTTCSSSCSHHHHHHHHT---TSCTTEEEEEE
T ss_pred ecCC-----------------HHHHHHHHHHHHHcCCEEE--EecC--CCcccccCCHHHHHHHHH---hCCCCccEEEc
Confidence 7532 1234566788899998765 2211 11 111235666666654 22333323345
Q ss_pred CcCcCCH-HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHH
Q 015894 270 TIGVGTP-GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVY 348 (398)
Q Consensus 270 T~G~~~P-~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~ 348 (398)
+.=...- .+..+.++.+. + --.++|++|..+- + +-+. +.+-+.|..+...++.
T Consensus 164 ~~h~~~~g~d~~~~l~~~~---~-~i~~vHl~D~~~~-----------~---------~~~~--~~~~G~G~id~~~~~~ 217 (257)
T 3lmz_A 164 VGHDLRNGCDPVADLKKYH---T-RVFDMHIKDVTDS-----------S---------KAGV--GIEIGRGKIDFPALIR 217 (257)
T ss_dssp HHHHHHTTCCHHHHHHHHG---G-GEEEEEECEESCS-----------S---------TTCC--EECTTSSSCCHHHHHH
T ss_pred hhhHHHcCCCHHHHHHHhh---c-ceeEEeecccccc-----------c---------CCCC--ccccCCCccCHHHHHH
Confidence 4321110 11233333333 2 2478999998761 0 0011 1111368999999999
Q ss_pred HHHhCCCCCc----c------ChHHHHHHHHHHHHHh
Q 015894 349 MLNGLGVRTN----V------DIRKLMIAGDFICKHL 375 (398)
Q Consensus 349 ~L~~~Gi~t~----i------Dl~~L~~~~~~v~~~~ 375 (398)
.|++.|++-- + ..+.+.+..+++.+.+
T Consensus 218 ~L~~~gy~g~~~lE~~~~~~~~~~~~~~s~~~l~~~l 254 (257)
T 3lmz_A 218 MMREVNYTGMCSLEYEKDMKDPFLGIAESIGYFKAVS 254 (257)
T ss_dssp HHHHTTCCSEEEECCCSSTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCceEEEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 9998766411 1 2345555555555543
No 112
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=94.64 E-value=1 Score=43.30 Aligned_cols=136 Identities=15% Similarity=0.145 Sum_probs=84.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeCC---H-hhHHHHHHcCCCEEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPN---L-KGFEAAVAAGAKEVA 190 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~n---~-~~ie~a~~~Gv~~v~ 190 (398)
.++.++..++++.+.+.|+..|-++. ..|-. ..|..++++.+++.+...-..+..| . +-++...++|++.|.
T Consensus 49 ~ls~e~i~~~i~~~~~~g~~~i~~tG-GEPll---~~~l~~li~~~~~~~~~~~i~i~TNG~ll~~~~~~L~~~g~~~v~ 124 (340)
T 1tv8_A 49 LLTFDEMARIAKVYAELGVKKIRITG-GEPLM---RRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRIN 124 (340)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEES-SCGGG---STTHHHHHHHHTTCTTCCEEEEEECSTTHHHHHHHHHHHTCCEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeC-CCccc---hhhHHHHHHHHHhCCCCCeEEEEeCccchHHHHHHHHHCCCCEEE
Confidence 57899999999999999999888753 12211 1245566666665544322333332 2 345667789999999
Q ss_pred EeccC-ch-HHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCC
Q 015894 191 IFASA-SE-SFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCS 263 (398)
Q Consensus 191 i~~~~-Sd-~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad 263 (398)
|.+.. ++ .|.+.. +.. ..++.+.+.++.+++.|+.|.++.. + .+. .+.+.+.++++.+.+.|++
T Consensus 125 iSld~~~~~~~~~i~-~~~--~~~~~v~~~i~~l~~~g~~v~i~~v--v-~~g---~n~~ei~~~~~~~~~~g~~ 190 (340)
T 1tv8_A 125 VSLDAIDDTLFQSIN-NRN--IKATTILEQIDYATSIGLNVKVNVV--I-QKG---INDDQIIPMLEYFKDKHIE 190 (340)
T ss_dssp EECCCSSHHHHHHHH-SSC--CCHHHHHHHHHHHHHTTCEEEEEEE--E-CTT---TTGGGHHHHHHHHHHTTCC
T ss_pred EecCCCCHHHHHHhh-CCC--CCHHHHHHHHHHHHHCCCCEEEEEE--E-eCC---CCHHHHHHHHHHHHhcCCe
Confidence 97654 33 332221 211 0245555667888889996654433 3 121 2456788888889999987
No 113
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=94.50 E-value=1.1 Score=44.17 Aligned_cols=133 Identities=11% Similarity=0.116 Sum_probs=91.0
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC
Q 015894 165 GARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGM 244 (398)
Q Consensus 165 ~~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r 244 (398)
++.+..=......++...+.|++.+.|... +. + .+ ..++++-+.|.+|- |+ .+.
T Consensus 91 Gi~~~st~fD~~svd~l~~~~v~~~KI~S~--~~--------~---N~----pLL~~va~~gKPvi--Ls-------tGm 144 (350)
T 3g8r_A 91 GFKAICTPFDEESVDLIEAHGIEIIKIASC--SF--------T---DW----PLLERIARSDKPVV--AS-------TAG 144 (350)
T ss_dssp TCEEEEEECSHHHHHHHHHTTCCEEEECSS--ST--------T---CH----HHHHHHHTSCSCEE--EE-------CTT
T ss_pred CCcEEeccCCHHHHHHHHHcCCCEEEECcc--cc--------c---CH----HHHHHHHhhCCcEE--EE-------CCC
Confidence 444444445778888888999999998532 11 1 11 34556667899875 44 234
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEE--ccCcCcCCHHHHHH--HHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCE
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISL--GDTIGVGTPGTVIP--MLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGIST 320 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L--~DT~G~~~P~~v~~--lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~ 320 (398)
.+.+++...++.+.+.|.+ |.| |= .++=+|..-.+ .|..+++.+|..++++=-|-.-+ ..+-+++|+.+||++
T Consensus 145 stl~Ei~~Ave~i~~~g~~-viLlhC~-s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~SdHt~g~-~~~~~~AAvAlGA~v 221 (350)
T 3g8r_A 145 ARREDIDKVVSFMLHRGKD-LTIMHCV-AEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHEDPD-LMEPIMLAVAQGATV 221 (350)
T ss_dssp CCHHHHHHHHHHHHTTTCC-EEEEECC-CCSSCCGGGCCTTHHHHHHHHCTTSEEEEEECCCSS-CCHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHcCCC-EEEEecC-CCCCCCcccCCHHHHHHHHHHCCCCCEEcCCCCCCC-ccHHHHHHHHcCCCE
Confidence 6899999999999888876 566 64 45555544333 57788899988899997787632 134568999999998
Q ss_pred Eee--ccc
Q 015894 321 VDS--SVS 326 (398)
Q Consensus 321 VD~--Sv~ 326 (398)
|+. |+.
T Consensus 222 IEkH~tld 229 (350)
T 3g8r_A 222 FEKHVGLP 229 (350)
T ss_dssp EEEEBCCC
T ss_pred EEEecCcc
Confidence 854 554
No 114
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=94.48 E-value=2.7 Score=38.11 Aligned_cols=199 Identities=13% Similarity=0.085 Sum_probs=104.1
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe---C-C----------HhhHHHHHHcCCC
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT---P-N----------LKGFEAAVAAGAK 187 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~---~-n----------~~~ie~a~~~Gv~ 187 (398)
.+.++.+.++|++.||+.......+...-.+.+++.+.++. .+.++.++. + + .+-++.|.+.|++
T Consensus 22 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 100 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEK-YGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGAR 100 (272)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHH-TTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHH-cCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCC
Confidence 45566778899999999852211011012355666655553 355554432 1 1 1235667778999
Q ss_pred EEEEeccCchHHHhhhcCCCHHHH-HHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEE-
Q 015894 188 EVAIFASASESFSKSNINCTIEDS-LIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEI- 265 (398)
Q Consensus 188 ~v~i~~~~Sd~~~~~~~~~s~~~~-l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I- 265 (398)
.|.+...... ....+.. .+.+.++.++|++.|+.+. +... +.+...-.+++.+.++++.+ + +.+
T Consensus 101 ~v~~~~g~~~-------~~~~~~~~~~~l~~l~~~a~~~gv~l~--~E~~-~~~~~~~~~~~~~~~l~~~v---~-~~~g 166 (272)
T 2q02_A 101 ALVLCPLNDG-------TIVPPEVTVEAIKRLSDLFARYDIQGL--VEPL-GFRVSSLRSAVWAQQLIREA---G-SPFK 166 (272)
T ss_dssp EEEECCCCSS-------BCCCHHHHHHHHHHHHHHHHTTTCEEE--ECCC-CSTTCSCCCHHHHHHHHHHH---T-CCCE
T ss_pred EEEEccCCCc-------hhHHHHHHHHHHHHHHHHHHHcCCEEE--EEec-CCCcccccCHHHHHHHHHHh---C-cCeE
Confidence 8887533211 0234566 7888888999999998754 2211 00111224567776666544 3 322
Q ss_pred EEccCcCcCC--HHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCC-Ccc
Q 015894 266 SLGDTIGVGT--PGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASG-NVA 342 (398)
Q Consensus 266 ~L~DT~G~~~--P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~graG-Na~ 342 (398)
..-||.=... -.. .+.+..++ .+--.++|+||..+-... .+. -|.-.. .+| .| +.+
T Consensus 167 ~~~D~~h~~~~~~~~-~~~~~~l~---~~~i~~vH~~D~~~~~~~-------~~~--~~~~~~-------~~G-~G~~id 225 (272)
T 2q02_A 167 VLLDTFHHHLYEEAE-KEFASRID---ISAIGLVHLSGVEDTRPT-------EAL--ADEQRI-------MLS-EKDVMQ 225 (272)
T ss_dssp EEEEHHHHHHCTTHH-HHHHHHCC---GGGEEEEEECBCCCCSCG-------GGC--CGGGCB-------CCC-TTCSSC
T ss_pred EEEEchHhhccCCCc-hhhhhhCC---HhHEEEEEeCCCcCCCCc-------hhc--cccccc-------cCC-CCCccc
Confidence 1236532211 011 13344332 233478888886432100 000 010001 122 44 799
Q ss_pred HHHHHHHHHhCCCC
Q 015894 343 TEDVVYMLNGLGVR 356 (398)
Q Consensus 343 lE~vv~~L~~~Gi~ 356 (398)
...++..|++.|++
T Consensus 226 ~~~~~~~L~~~gy~ 239 (272)
T 2q02_A 226 NYQQVQRLENMGYR 239 (272)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCC
Confidence 99999999987775
No 115
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=94.48 E-value=1.3 Score=40.65 Aligned_cols=195 Identities=12% Similarity=0.088 Sum_probs=97.8
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--C---C-----H-----------hhHHH
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--P---N-----L-----------KGFEA 180 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~---n-----~-----------~~ie~ 180 (398)
.+.++.+.++|++.||+.......+.+ .+.+++.+.++. .++++.++. + + . +.++.
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~~~~~~~~--~~~~~~~~~l~~-~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~ 96 (290)
T 2qul_A 20 PATAKRIAGLGFDLMEISLGEFHNLSD--AKKRELKAVADD-LGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDD 96 (290)
T ss_dssp HHHHHHHHHTTCSEEEEESTTGGGSCH--HHHHHHHHHHHH-HTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEecCCccccch--hhHHHHHHHHHH-cCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 456677778999999998643111000 123333333332 245554432 1 1 1 12456
Q ss_pred HHHcCCCEEEEec----cCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHH
Q 015894 181 AVAAGAKEVAIFA----SASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQ 256 (398)
Q Consensus 181 a~~~Gv~~v~i~~----~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~ 256 (398)
|.+.|++.|.+.. ...............+...+.+.++.++|++.|+.+. +...-..+...-.+++.+.++++.
T Consensus 97 a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--lEn~~~~~~~~~~~~~~~~~l~~~ 174 (290)
T 2qul_A 97 CHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYA--LEVVNRFEQWLCNDAKEAIAFADA 174 (290)
T ss_dssp HHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEE--EECCCTTTCSSCCSHHHHHHHHHH
T ss_pred HHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEE--EEeCccccccccCCHHHHHHHHHH
Confidence 6778999887643 1100000000001134455666777888999998764 221100011112467777776654
Q ss_pred HHhCCCCEE-EEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCC
Q 015894 257 LYDMGCSEI-SLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAK 335 (398)
Q Consensus 257 l~~~Gad~I-~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~ 335 (398)
+ +.+.+ ..-|+.=...-. .+....+++ +.+--.++|+||..+ . .+
T Consensus 175 ~---~~~~~g~~~D~~h~~~~g--~d~~~~l~~-~~~~i~~vH~~D~~~---------------------~-------~~ 220 (290)
T 2qul_A 175 V---DSPACKVQLDTFHMNIEE--TSFRDAILA-CKGKMGHFHLGEANR---------------------L-------PP 220 (290)
T ss_dssp H---CCTTEEEEEEHHHHHHHC--SCHHHHHHH-TTTTEEEEEECCTTS---------------------C-------CT
T ss_pred c---CCCCEEEEEEchhhhhcC--CCHHHHHHH-HHhheeEEEEccCCC---------------------C-------CC
Confidence 3 43222 233652111100 012233333 333348899998742 0 12
Q ss_pred CCCCCccHHHHHHHHHhCCCC
Q 015894 336 GASGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 336 graGNa~lE~vv~~L~~~Gi~ 356 (398)
+.|..+.+.++..|++.|++
T Consensus 221 -G~G~id~~~~~~~L~~~gy~ 240 (290)
T 2qul_A 221 -GEGRLPWDEIFGALKEIGYD 240 (290)
T ss_dssp -TSSCSCHHHHHHHHHHTTCC
T ss_pred -CCCCcCHHHHHHHHHHhCCC
Confidence 25789999999999987763
No 116
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=94.43 E-value=0.82 Score=44.69 Aligned_cols=138 Identities=17% Similarity=0.078 Sum_probs=86.8
Q ss_pred HHHHHcCCCEEEEeccC--------chH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEeeeecCCCCCCCCH
Q 015894 179 EAAVAAGAKEVAIFASA--------SES--FSKSNINCTIEDSLIRYRDVALAAREL-SIPVRGYLSCVVGCPVEGMVPP 247 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~--------Sd~--~~~~~~~~s~~~~l~~~~~~v~~ak~~-G~~v~~~l~~~fg~~~~~r~~~ 247 (398)
++|.++|.|.|-|-..- |+. +....+|-+.+.-.+.+.++++.+|+. .+.|.+-++..... .+-.+.
T Consensus 151 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~--~~g~~~ 228 (340)
T 3gr7_A 151 RRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYH--PDGLTA 228 (340)
T ss_dssp HHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCS--TTSCCG
T ss_pred HHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEecccccc--CCCCCH
Confidence 45678999998886552 332 223445667777777777888887764 66666556632101 123467
Q ss_pred HHHHHHHHHHHhCCCCEEEEccC--cCc---CCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhC-CCEE
Q 015894 248 SKVAYVSKQLYDMGCSEISLGDT--IGV---GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMG-ISTV 321 (398)
Q Consensus 248 ~~l~~~a~~l~~~Gad~I~L~DT--~G~---~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aG-a~~V 321 (398)
+...++++.+.++|+|.|.+.+. ... ..|..-.++++.+++.+. +||..=+--+ ....+..+++.| ||.|
T Consensus 229 ~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~-iPVi~~GgI~---s~e~a~~~L~~G~aD~V 304 (340)
T 3gr7_A 229 KDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREAD-IPTGAVGLIT---SGWQAEEILQNGRADLV 304 (340)
T ss_dssp GGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTT-CCEEEESSCC---CHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcC-CcEEeeCCCC---CHHHHHHHHHCCCeeEE
Confidence 88899999999999999998652 110 123334567888888774 3444432211 245667788888 8866
Q ss_pred e
Q 015894 322 D 322 (398)
Q Consensus 322 D 322 (398)
-
T Consensus 305 ~ 305 (340)
T 3gr7_A 305 F 305 (340)
T ss_dssp E
T ss_pred E
Confidence 3
No 117
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=94.42 E-value=0.67 Score=44.95 Aligned_cols=208 Identities=13% Similarity=0.093 Sum_probs=120.9
Q ss_pred HHHHHHhcCCCEEEEe-cC------CCCCcccCCCCHHHHHHHHHhcc---CCcEEEEe--C----CH----hhHHHHHH
Q 015894 124 LIKLLVSSGLAVVEAT-SF------VSPKWVPQLADAKDVMAAIQNVE---GARFPVLT--P----NL----KGFEAAVA 183 (398)
Q Consensus 124 ia~~L~~aGv~~IEvG-~~------~~~~~~p~~~D~~~v~~~i~~~~---~~~l~~l~--~----n~----~~ie~a~~ 183 (398)
-++.++++|++.|=++ .. ..|+.. .-..++++..++.+. ++.+.+++ + +. +-++...+
T Consensus 37 sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~--~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~ 114 (307)
T 3lye_A 37 SARTAMELGFKSLYMTGAGTTASRLGQPDLA--IAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPIMVARTVEHYIR 114 (307)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHHCCCSSS--CSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeccHHHHHHhcCCCCCC--CCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCHHHHHHHHHHHHH
Confidence 4567788999999994 21 123322 234566666666442 21234443 2 22 23566678
Q ss_pred cCCCEEEEeccCchH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEE-EEeeeecCCCCCCCCHHHHHHHHHHHHh
Q 015894 184 AGAKEVAIFASASES---FSKSNINCTIEDSLIRYRDVALAARELSIPVRG-YLSCVVGCPVEGMVPPSKVAYVSKQLYD 259 (398)
Q Consensus 184 ~Gv~~v~i~~~~Sd~---~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~-~l~~~fg~~~~~r~~~~~l~~~a~~l~~ 259 (398)
+|+.-|+|-..+.+- |...+-=.+.++..++++.+++.+++.|..+.+ .=+.++. ....+..++-++...+
T Consensus 115 aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~-----~~gldeAi~Ra~ay~e 189 (307)
T 3lye_A 115 SGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQ-----SLGYEECIERLRAARD 189 (307)
T ss_dssp TTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHH-----HHCHHHHHHHHHHHHH
T ss_pred cCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhh-----ccCHHHHHHHHHHHHH
Confidence 999999998887542 111111237888999998777777666643321 0011110 1134566666777888
Q ss_pred CCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCC-ccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCC
Q 015894 260 MGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHD-TYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGAS 338 (398)
Q Consensus 260 ~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hn-d~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~gra 338 (398)
+|||.|.+. |.-+++++.++.+.+. ..|. .+-+-... +..+. .-.--+.|+++|-.....+ |+
T Consensus 190 AGAD~ifi~---~~~~~~~~~~i~~~~~-~~Pv-~~n~~~~g~~p~~t---~~eL~~lGv~~v~~~~~~~--------ra 253 (307)
T 3lye_A 190 EGADVGLLE---GFRSKEQAAAAVAALA-PWPL-LLNSVENGHSPLIT---VEEAKAMGFRIMIFSFATL--------AP 253 (307)
T ss_dssp TTCSEEEEC---CCSCHHHHHHHHHHHT-TSCB-EEEEETTSSSCCCC---HHHHHHHTCSEEEEETTTH--------HH
T ss_pred CCCCEEEec---CCCCHHHHHHHHHHcc-CCce-eEEeecCCCCCCCC---HHHHHHcCCeEEEEChHHH--------HH
Confidence 999999987 6678888888888874 2342 12221111 12222 2333457999985544433 55
Q ss_pred CCccHHHHHHHHHhCC
Q 015894 339 GNVATEDVVYMLNGLG 354 (398)
Q Consensus 339 GNa~lE~vv~~L~~~G 354 (398)
-..++++.+..|++.|
T Consensus 254 a~~a~~~~~~~l~~~g 269 (307)
T 3lye_A 254 AYAAIRETLVRLRDHG 269 (307)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhC
Confidence 5777888888887644
No 118
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=94.21 E-value=0.72 Score=42.71 Aligned_cols=206 Identities=12% Similarity=0.037 Sum_probs=94.8
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--CCHhhHHHHHHcCCCEEEEeccCch
Q 015894 120 VKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--PNLKGFEAAVAAGAKEVAIFASASE 197 (398)
Q Consensus 120 ~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~n~~~ie~a~~~Gv~~v~i~~~~Sd 197 (398)
+-.++++.+.+.|++.|++.-....... .-.+. +.++.+++..++.+.+.. ++..+++.++++|++.|.+....-+
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~-~g~~~-~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~~ 108 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTK-SGYDT-EMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASVFHF 108 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCS-SCCCH-HHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC--
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCC-CcccH-HHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHHh
Confidence 4578999999999999999643321100 11233 344455543455555433 5678899999999998887543210
Q ss_pred HHHhhhcCCCHHHHHHHHHHHHHHHHhCC--C-cEEEEEeee--ec---CCCCCCC--CHHHHHHHHHHHHhCCCCEEEE
Q 015894 198 SFSKSNINCTIEDSLIRYRDVALAARELS--I-PVRGYLSCV--VG---CPVEGMV--PPSKVAYVSKQLYDMGCSEISL 267 (398)
Q Consensus 198 ~~~~~~~~~s~~~~l~~~~~~v~~ak~~G--~-~v~~~l~~~--fg---~~~~~r~--~~~~l~~~a~~l~~~Gad~I~L 267 (398)
. ....+.+++ .+++.| . .+...+..- -| -...+.. +.....+.++.+.++|++.|++
T Consensus 109 --~--------~~~~~~~~~---~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~ 175 (266)
T 2w6r_A 109 --R--------EIDMRELKE---YLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEILL 175 (266)
T ss_dssp --------------CHHHHH---HCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEE
T ss_pred --C--------CCCHHHHHH---HHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEEEE
Confidence 0 001122222 223344 2 221112110 00 0001100 0012345567777899999998
Q ss_pred cc--CcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH-HHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHH
Q 015894 268 GD--TIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA-LSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATE 344 (398)
Q Consensus 268 ~D--T~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA-~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE 344 (398)
-+ ..|...+.. .++++.+++..+ +|+-.= -|.. ..++..++++||+.|=+.-.=+. +.-..+
T Consensus 176 t~~~~~g~~~g~~-~~~i~~l~~~~~-ipvia~----GGI~~~ed~~~~~~~Gadgv~vgsal~~---------~~~~~~ 240 (266)
T 2w6r_A 176 TSIDRDGTKSGYD-TEMIRFVRPLTT-LPIIAS----GGAGKMEHFLEAFLAGADAALAASVFHF---------REIDMR 240 (266)
T ss_dssp EETTTTTTCSCCC-HHHHHHHGGGCC-SCEEEE----SCCCSHHHHHHHHHHTCSEEEESTTTC----------------
T ss_pred EeecCCCCcCCCC-HHHHHHHHHHcC-CCEEEe----CCCCCHHHHHHHHHcCCHHHHccHHHHc---------CCCCHH
Confidence 55 334433322 456677776543 344332 3444 35667777789886543322122 233577
Q ss_pred HHHHHHHhCCC
Q 015894 345 DVVYMLNGLGV 355 (398)
Q Consensus 345 ~vv~~L~~~Gi 355 (398)
++...|++.|+
T Consensus 241 ~~~~~l~~~g~ 251 (266)
T 2w6r_A 241 ELKEYLKKHGV 251 (266)
T ss_dssp -----------
T ss_pred HHHHHHHHCCC
Confidence 77777877776
No 119
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=94.19 E-value=2.4 Score=39.94 Aligned_cols=180 Identities=15% Similarity=0.174 Sum_probs=111.5
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCccc-CCCC-HHHHHHHHHhc---cCCcEEEEeCCHhhHHHHHHcCCCEEE
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVP-QLAD-AKDVMAAIQNV---EGARFPVLTPNLKGFEAAVAAGAKEVA 190 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p-~~~D-~~~v~~~i~~~---~~~~l~~l~~n~~~ie~a~~~Gv~~v~ 190 (398)
=+.+.-+++++.+.++|.+.+-.+.|- |+--| ++.. .++-++.+++. .+..+..=......++.+.+. ++.+.
T Consensus 34 ~~~e~a~~~a~~l~~~Ga~~vk~~~fk-prts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~k 111 (262)
T 1zco_A 34 ESREQIMKVAEFLAEVGIKVLRGGAFK-PRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVMDTRHVELVAKY-SDILQ 111 (262)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSSC-CCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH-CSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecc-cCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh-CCEEE
Confidence 368999999999999999999888763 21111 1110 12333344322 244333333467778888888 99999
Q ss_pred EeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHhCCCCEEEEcc
Q 015894 191 IFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGM-VPPSKVAYVSKQLYDMGCSEISLGD 269 (398)
Q Consensus 191 i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r-~~~~~l~~~a~~l~~~Gad~I~L~D 269 (398)
|-...-. . . ..++++-+.|.+|. +. .+. .+++.+...++.+...|.+.+.|+-
T Consensus 112 Iga~~~~----------n---~----~ll~~~a~~~kPV~--lk-------~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~ 165 (262)
T 1zco_A 112 IGARNSQ----------N---F----ELLKEVGKVENPVL--LK-------RGMGNTIQELLYSAEYIMAQGNENVILCE 165 (262)
T ss_dssp ECGGGTT----------C---H----HHHHHHTTSSSCEE--EE-------CCTTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred ECccccc----------C---H----HHHHHHHhcCCcEE--Ee-------cCCCCCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 8543111 1 1 22344445788886 33 123 3799999999999999987777766
Q ss_pred ----Cc-CcCCHHHHH-HHHHHHHhhCCCCeE-EEEeCCc--cchHHHHHHHHHHhCCC--EEeecc
Q 015894 270 ----TI-GVGTPGTVI-PMLEAVLDAVPVDKL-AVHFHDT--YGQALSNILASLQMGIS--TVDSSV 325 (398)
Q Consensus 270 ----T~-G~~~P~~v~-~lv~~l~~~~p~~~l-~~H~Hnd--~GlA~ANalaAl~aGa~--~VD~Sv 325 (398)
+. ++ .+..+. ..+..+++.+. .|| +.=.|-+ .-+...-+.+|+..||+ +|+.=+
T Consensus 166 RG~~~~~~y-~~~~v~L~ai~~lk~~~~-~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 166 RGIRTFETA-TRFTLDISAVPVVKELSH-LPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHP 230 (262)
T ss_dssp CCBCCSCCS-SSSBCCTTHHHHHHHHBS-SCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CCCCCCCCc-ChhhcCHHHHHHHHhhhC-CCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 43 44 455444 56677777653 345 5545532 22333557779999999 887763
No 120
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=94.18 E-value=0.64 Score=44.98 Aligned_cols=206 Identities=13% Similarity=0.094 Sum_probs=120.2
Q ss_pred HHHHHHhcCCCEEEEe-cC------CCCCcccCCCCHHHHHHHHHhccCC--cEEEEe--C----CH----hhHHHHHHc
Q 015894 124 LIKLLVSSGLAVVEAT-SF------VSPKWVPQLADAKDVMAAIQNVEGA--RFPVLT--P----NL----KGFEAAVAA 184 (398)
Q Consensus 124 ia~~L~~aGv~~IEvG-~~------~~~~~~p~~~D~~~v~~~i~~~~~~--~l~~l~--~----n~----~~ie~a~~~ 184 (398)
-++.++++|++.|=++ .. ..|+.. .-+.++++..++.+... .+.+++ + +. +-++...++
T Consensus 30 sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~--~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~a 107 (302)
T 3fa4_A 30 SARVALSAGFDALYMTGAGTAASVHGQADLG--ICTLNDMRANAEMISNISPSTPVIADADTGYGGPIMVARTTEQYSRS 107 (302)
T ss_dssp HHHHHHTTTCSCEEECHHHHHHHHHSCCSSS--CCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEeCcHHHHHHHcCCCCCC--cCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCHHHHHHHHHHHHHc
Confidence 4667888999999984 21 123322 23456666666543221 333333 2 22 235566789
Q ss_pred CCCEEEEeccCchH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEE-EEeeeecCCCCCCCCHHHHHHHHHHHHhC
Q 015894 185 GAKEVAIFASASES---FSKSNINCTIEDSLIRYRDVALAARELSIPVRG-YLSCVVGCPVEGMVPPSKVAYVSKQLYDM 260 (398)
Q Consensus 185 Gv~~v~i~~~~Sd~---~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~-~l~~~fg~~~~~r~~~~~l~~~a~~l~~~ 260 (398)
|+.-|+|-..+.+- |...+-=.+.++..++++.+++.+++.|..+.. .=+.++. ....+...+-++...++
T Consensus 108 Gaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~-----~~gldeAi~Ra~ay~eA 182 (302)
T 3fa4_A 108 GVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQ-----THGYEESVARLRAARDA 182 (302)
T ss_dssp TCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHH-----HHCHHHHHHHHHHHHTT
T ss_pred CCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccc-----cCCHHHHHHHHHHHHHc
Confidence 99999998887542 211122237899999998777776655554321 0011110 12345666667777889
Q ss_pred CCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEE--eCC-ccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCC
Q 015894 261 GCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVH--FHD-TYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGA 337 (398)
Q Consensus 261 Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H--~Hn-d~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~gr 337 (398)
|+|.|.+. |.-+|+++.++.+.+. ..|+-+- ... +..+ ..-.--++|+++|-.....+ |
T Consensus 183 GAD~ifi~---g~~~~~ei~~~~~~~~----~~Pl~~n~~~~g~~p~~---~~~eL~~lGv~~v~~~~~~~--------r 244 (302)
T 3fa4_A 183 GADVGFLE---GITSREMARQVIQDLA----GWPLLLNMVEHGATPSI---SAAEAKEMGFRIIIFPFAAL--------G 244 (302)
T ss_dssp TCSEEEET---TCCCHHHHHHHHHHTT----TSCEEEECCTTSSSCCC---CHHHHHHHTCSEEEETTTTH--------H
T ss_pred CCCEEeec---CCCCHHHHHHHHHHhc----CCceeEEEecCCCCCCC---CHHHHHHcCCCEEEEchHHH--------H
Confidence 99999885 4567888887777653 2233322 111 1122 22233456999887666655 5
Q ss_pred CCCccHHHHHHHHHhCC
Q 015894 338 SGNVATEDVVYMLNGLG 354 (398)
Q Consensus 338 aGNa~lE~vv~~L~~~G 354 (398)
+-..++++.+..|++.|
T Consensus 245 aa~~A~~~~~~~i~~~g 261 (302)
T 3fa4_A 245 PAVAAMREAMEKLKRDG 261 (302)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 56778888888887644
No 121
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=94.00 E-value=1.2 Score=43.62 Aligned_cols=138 Identities=19% Similarity=0.146 Sum_probs=85.8
Q ss_pred HHHHHcCCCEEEEeccC--------chH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-C--CcEEEEEeeeecCCCCCCC
Q 015894 179 EAAVAAGAKEVAIFASA--------SES--FSKSNINCTIEDSLIRYRDVALAAREL-S--IPVRGYLSCVVGCPVEGMV 245 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~--------Sd~--~~~~~~~~s~~~~l~~~~~~v~~ak~~-G--~~v~~~l~~~fg~~~~~r~ 245 (398)
++|.++|.|.|.|-.+- |+. +....+|-+.++-.+.+.++++.+|+. | +.|.+-++.... ..+-.
T Consensus 159 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~--~~~g~ 236 (349)
T 3hgj_A 159 RRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDW--GEGGW 236 (349)
T ss_dssp HHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCC--STTSC
T ss_pred HHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccc--cCCCC
Confidence 46678999988886542 121 223345667777777788888888775 3 446555553211 11235
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcc--CcCc----CCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhC-C
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGD--TIGV----GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMG-I 318 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~D--T~G~----~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aG-a 318 (398)
+++...++++.+.++|+|.|.+.. +... ..|..-.++++.+++.++ +||..=+-- .....+..+++.| |
T Consensus 237 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~Ggi---~t~e~a~~~l~~G~a 312 (349)
T 3hgj_A 237 SLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVG-LRTGAVGLI---TTPEQAETLLQAGSA 312 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHC-CEEEECSSC---CCHHHHHHHHHTTSC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcC-ceEEEECCC---CCHHHHHHHHHCCCc
Confidence 788899999999999999998875 1111 123334567788887764 344432211 1246677888898 7
Q ss_pred CEEe
Q 015894 319 STVD 322 (398)
Q Consensus 319 ~~VD 322 (398)
|.|-
T Consensus 313 D~V~ 316 (349)
T 3hgj_A 313 DLVL 316 (349)
T ss_dssp SEEE
T ss_pred eEEE
Confidence 7653
No 122
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=93.99 E-value=1.4 Score=40.34 Aligned_cols=196 Identities=18% Similarity=0.198 Sum_probs=101.3
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCC-cccCCCCH---HHHHHHHHhccCC-cEEEEeC---CH---------------h
Q 015894 120 VKVELIKLLVSSGLAVVEATSFVSPK-WVPQLADA---KDVMAAIQNVEGA-RFPVLTP---NL---------------K 176 (398)
Q Consensus 120 ~k~~ia~~L~~aGv~~IEvG~~~~~~-~~p~~~D~---~~v~~~i~~~~~~-~l~~l~~---n~---------------~ 176 (398)
.-.+.++.+.++|++.||+ +...|. |.+..-+. +++.+.++. .+. .+++..+ |. +
T Consensus 15 ~~~~~~~~~~~~G~~~vEl-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~~ 92 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQI-FAKSPRSWRPRALSPAEVEAFRALREA-SGGLPAVIHASYLVNLGAEGELWEKSVASLAD 92 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEE-ESSCTTCCSCCCCCHHHHHHHHHHHHH-TTCCCEEEECCTTCCTTCSSTHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEE-eCCCCCcCcCCCCCHHHHHHHHHHHHH-cCCceEEEecCcccCCCCCHHHHHHHHHHHHH
Confidence 3456777888899999999 332321 21111122 223333332 244 4444432 11 1
Q ss_pred hHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHH-hCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 015894 177 GFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAAR-ELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSK 255 (398)
Q Consensus 177 ~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak-~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~ 255 (398)
.++.|.+.|++.|.+..+.. +.+...+.+.++.++|+ +.|+.+. +....+.+..--.+++.+.++++
T Consensus 93 ~i~~a~~lGa~~vv~h~g~~----------~~~~~~~~l~~l~~~a~~~~gv~l~--lEn~~~~~~~~~~~~~~~~~l~~ 160 (270)
T 3aam_A 93 DLEKAALLGVEYVVVHPGSG----------RPERVKEGALKALRLAGVRSRPVLL--VENTAGGGEKVGARFEELAWLVA 160 (270)
T ss_dssp HHHHHHHHTCCEEEECCCBS----------CHHHHHHHHHHHHHHHTCCSSSEEE--EECCCCCTTBSCCSHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEECCCCC----------CHHHHHHHHHHHHHhhcccCCCEEE--EecCCCCCCccCCCHHHHHHHHH
Confidence 24566778988887654321 12566777788888887 7787654 33221110001137788887776
Q ss_pred HHHhCCCCEEEEccCc-----CcCCHHHHHHHHHHHHhhCC-CCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCC
Q 015894 256 QLYDMGCSEISLGDTI-----GVGTPGTVIPMLEAVLDAVP-VDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLG 329 (398)
Q Consensus 256 ~l~~~Gad~I~L~DT~-----G~~~P~~v~~lv~~l~~~~p-~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlG 329 (398)
.+ ..| +++ ||. |.-....+.++++.+.+.++ +--.++|+||..+-- |.. .|- -..+
T Consensus 161 ~v-~vg---~~l-D~~H~~~~g~d~~~~~~~~l~~~~~~~g~~~i~~vHl~D~~~~~----------~~~-~d~-h~~~- 222 (270)
T 3aam_A 161 DT-PLQ---VCL-DTCHAYAAGYDVAEDPLGVLDALDRAVGLERVPVVHLNDSVGGL----------GSR-VDH-HAHL- 222 (270)
T ss_dssp TS-SCE---EEE-EHHHHHHHTCCTTTCHHHHHHHHHHHTCGGGCCEEECCEESSCT----------TCC-CCC-EECT-
T ss_pred hC-CEE---EEE-ehhhHHhccCCchhhHHHHHHHHHHhcCccceeEEEEecCCCcc----------ccC-ccc-ccCC-
Confidence 55 222 222 543 21111134556666655443 334788999875420 110 000 0012
Q ss_pred CCCCCCCCCCCccHHHHHHHHHhCCC
Q 015894 330 GCPYAKGASGNVATEDVVYMLNGLGV 355 (398)
Q Consensus 330 ecp~a~graGNa~lE~vv~~L~~~Gi 355 (398)
+.|..+ +.++..|++.|+
T Consensus 223 -------G~G~id-~~~~~~L~~~~y 240 (270)
T 3aam_A 223 -------LQGKIG-EGLKRVFLDPRL 240 (270)
T ss_dssp -------TSSSST-THHHHHHTCGGG
T ss_pred -------CCCCcC-HHHHHHHhccCc
Confidence 257889 999999987544
No 123
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=93.98 E-value=0.24 Score=48.07 Aligned_cols=118 Identities=16% Similarity=0.198 Sum_probs=83.8
Q ss_pred HHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCE-EEEcc-CcCcCCHHHHHHHHHHHHhhCCC
Q 015894 215 YRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSE-ISLGD-TIGVGTPGTVIPMLEAVLDAVPV 292 (398)
Q Consensus 215 ~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~-I~L~D-T~G~~~P~~v~~lv~~l~~~~p~ 292 (398)
++++.+.|++.|+-|-+ +. -.+.+.+..+++.+.+.+... |.+.- +..++...-+..++..+.+.++.
T Consensus 5 ~~~ll~~A~~~~yAV~A-fN---------v~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~ 74 (307)
T 3n9r_A 5 GNEILLKAHKEGYGVGA-FN---------FVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPH 74 (307)
T ss_dssp HHHHHHHHHHHTCCEEE-EE---------CSSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcCceEEE-Ee---------eCCHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcCC
Confidence 45778899999998742 22 136788889999999998874 44432 23334445677777777776555
Q ss_pred CeEEEEeCCccchHHHHHHHHHHhCCC--EEeeccccCCCCCCCCCCCCCc-cHHHHHHHHHhC
Q 015894 293 DKLAVHFHDTYGQALSNILASLQMGIS--TVDSSVSGLGGCPYAKGASGNV-ATEDVVYMLNGL 353 (398)
Q Consensus 293 ~~l~~H~Hnd~GlA~ANalaAl~aGa~--~VD~Sv~GlGecp~a~graGNa-~lE~vv~~L~~~ 353 (398)
+|+.+|. |.|.....+..|+++|.+ ++|+|-..+-+ |. -|.+++.+.+..
T Consensus 75 VPValHL--DHg~~~e~~~~ai~~GFtSVMiDgS~~p~ee---------Ni~~Tk~vv~~ah~~ 127 (307)
T 3n9r_A 75 IPVALHL--DHGTTFESCEKAVKAGFTSVMIDASHHAFEE---------NLELTSKVVKMAHNA 127 (307)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHHTCSEEEECCTTSCHHH---------HHHHHHHHHHHHHHT
T ss_pred CcEEEEC--CCCCCHHHHHHHHHhCCCcEEEECCCCCHHH---------HHHHHHHHHHHHHHc
Confidence 6777765 556667899999999998 77999998777 65 566777776643
No 124
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=93.97 E-value=1.3 Score=40.27 Aligned_cols=157 Identities=10% Similarity=0.044 Sum_probs=90.0
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe------------CCHhhHHHHHHcCCC
Q 015894 120 VKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT------------PNLKGFEAAVAAGAK 187 (398)
Q Consensus 120 ~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~------------~n~~~ie~a~~~Gv~ 187 (398)
+..++++.+.+.|++.|++.. + +.++.+++..+..+..+. +..+.++.++++|++
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~~------------~-~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad 103 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRANS------------V-RDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIA 103 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEES------------H-HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCS
T ss_pred hHHHHHHHHHHCCCcEeecCC------------H-HHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCC
Confidence 568899999999999999862 1 235566654455543221 235678899999999
Q ss_pred EEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhC--CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEE
Q 015894 188 EVAIFASASESFSKSNINCTIEDSLIRYRDVALAAREL--SIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEI 265 (398)
Q Consensus 188 ~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~--G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I 265 (398)
.|.+-...... .-+.. +.+.++.+++. +..+.+ . ..+++. ++.+.+.|+|.|
T Consensus 104 ~V~l~~~~~~~----~~~~~-------~~~~i~~i~~~~~~~~v~~--~---------~~t~~e----a~~a~~~Gad~i 157 (234)
T 1yxy_A 104 VIAMDCTKRDR----HDGLD-------IASFIRQVKEKYPNQLLMA--D---------ISTFDE----GLVAHQAGIDFV 157 (234)
T ss_dssp EEEEECCSSCC----TTCCC-------HHHHHHHHHHHCTTCEEEE--E---------CSSHHH----HHHHHHTTCSEE
T ss_pred EEEEcccccCC----CCCcc-------HHHHHHHHHHhCCCCeEEE--e---------CCCHHH----HHHHHHcCCCEE
Confidence 98775442210 00011 23556666665 554431 1 123433 566778999998
Q ss_pred E--EccCc-Cc--CCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH-HHHHHHHHHhCCCEEe
Q 015894 266 S--LGDTI-GV--GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA-LSNILASLQMGISTVD 322 (398)
Q Consensus 266 ~--L~DT~-G~--~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA-~ANalaAl~aGa~~VD 322 (398)
. +.... |. ..+.. .++++.+++. ++++.. +-|.. ..|+...+++||+.|=
T Consensus 158 ~~~v~g~~~~~~~~~~~~-~~~i~~~~~~--~ipvia----~GGI~s~~~~~~~~~~Gad~v~ 213 (234)
T 1yxy_A 158 GTTLSGYTPYSRQEAGPD-VALIEALCKA--GIAVIA----EGKIHSPEEAKKINDLGVAGIV 213 (234)
T ss_dssp ECTTTTSSTTSCCSSSCC-HHHHHHHHHT--TCCEEE----ESCCCSHHHHHHHHTTCCSEEE
T ss_pred eeeccccCCCCcCCCCCC-HHHHHHHHhC--CCCEEE----ECCCCCHHHHHHHHHCCCCEEE
Confidence 2 22111 11 11222 2445666553 344544 33555 6777888888988653
No 125
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=93.92 E-value=1.5 Score=42.66 Aligned_cols=139 Identities=14% Similarity=0.024 Sum_probs=86.8
Q ss_pred HHHHHHcCCCEEEEeccC--------chH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEeeeecCCCCCCCC
Q 015894 178 FEAAVAAGAKEVAIFASA--------SES--FSKSNINCTIEDSLIRYRDVALAAREL-SIPVRGYLSCVVGCPVEGMVP 246 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~--------Sd~--~~~~~~~~s~~~~l~~~~~~v~~ak~~-G~~v~~~l~~~fg~~~~~r~~ 246 (398)
.+++.++|.|.|.|-..- |+. .....+|-+.++-.+.+.++++.+|+. ++.|.+-++..- ...+..+
T Consensus 150 A~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~--~~~~g~~ 227 (338)
T 1z41_A 150 AARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASD--YTDKGLD 227 (338)
T ss_dssp HHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCC--CSTTSCC
T ss_pred HHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcc--cCCCCCC
Confidence 346678999998886532 121 122345566776677777788777764 666665565321 1122457
Q ss_pred HHHHHHHHHHHHhCCCCEEEEccCcC--c---CCHHHHHHHHHHHHhhCCCCeEEEEeCCccch-HHHHHHHHHHhC-CC
Q 015894 247 PSKVAYVSKQLYDMGCSEISLGDTIG--V---GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQ-ALSNILASLQMG-IS 319 (398)
Q Consensus 247 ~~~l~~~a~~l~~~Gad~I~L~DT~G--~---~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~Gl-A~ANalaAl~aG-a~ 319 (398)
.+...++++.+.++|++.|.+.+..- . ..|..-.++++.+++.+. +||..=+ |. ....+..+++.| |+
T Consensus 228 ~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~G----gi~s~~~a~~~l~~G~aD 302 (338)
T 1z41_A 228 IADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQAD-MATGAVG----MITDGSMAEEILQNGRAD 302 (338)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHC-CEEEECS----SCCSHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCC-CCEEEEC----CCCCHHHHHHHHHcCCce
Confidence 88899999999999999999876421 1 122223566777877763 3444322 22 246677788888 88
Q ss_pred EEee
Q 015894 320 TVDS 323 (398)
Q Consensus 320 ~VD~ 323 (398)
.|-.
T Consensus 303 ~V~i 306 (338)
T 1z41_A 303 LIFI 306 (338)
T ss_dssp EEEE
T ss_pred EEee
Confidence 6643
No 126
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=93.89 E-value=4.2 Score=38.08 Aligned_cols=220 Identities=15% Similarity=0.057 Sum_probs=132.2
Q ss_pred cEEEeCCCcccCCCCC---CCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHH---HHHHhcc-CCcEEE
Q 015894 98 VKIVEVGPRDGLQNEK---NIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVM---AAIQNVE-GARFPV 170 (398)
Q Consensus 98 I~i~D~TLRDG~Q~~~---~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~---~~i~~~~-~~~l~~ 170 (398)
|++-+.++..|.-..- ..-+.++.+..++.+.+.|.|.||+-...-.+ ..+.+.+. ..+++.. +..+..
T Consensus 8 ~~v~~~~~g~~~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~----~~~~~~v~~~l~~lr~~~~~~PiI~ 83 (257)
T 2yr1_A 8 IKVRNIWIGGTEPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRA----IDDQERVLATANGLRNIAGEIPILF 83 (257)
T ss_dssp EEETTEEESSSSCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTT----TTCHHHHHHHHHHHHHHSSSCCEEE
T ss_pred EEEeeeeeCCCCcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccc----cCcHHHHHHHHHHHHHhccCCCEEE
Confidence 5666666655543211 12245555677777788899999997532111 12344444 3444332 444433
Q ss_pred EeCCH-----------h----hHHHHHHcC-CCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEe
Q 015894 171 LTPNL-----------K----GFEAAVAAG-AKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLS 234 (398)
Q Consensus 171 l~~n~-----------~----~ie~a~~~G-v~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~ 234 (398)
-.|.. . =++.+++.| ++.|.|-....+ .+.++++.+++.|..+-+..=
T Consensus 84 T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~----------------~~~~l~~~~~~~~~kvI~S~H 147 (257)
T 2yr1_A 84 TIRSEREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAYGE----------------RIADVRRMTEECSVWLVVSRH 147 (257)
T ss_dssp ECCCTTTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGGGTT----------------HHHHHHHHHHHTTCEEEEEEE
T ss_pred EEeecccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCCCh----------------hHHHHHHHHHhCCCEEEEEec
Confidence 33421 1 145677888 999999655322 234567788888887753222
Q ss_pred eeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhh--CCCCeEEEEeCCccchHHHHHHH
Q 015894 235 CVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDA--VPVDKLAVHFHDTYGQALSNILA 312 (398)
Q Consensus 235 ~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~--~p~~~l~~H~Hnd~GlA~ANala 312 (398)
. | ....+.+.+....+++.++|||.+-|+=+. -++.++..+++...+. .+..|+-.-. .-.++.-.-+.
T Consensus 148 d-f----~~tP~~~el~~~~~~~~~~gaDivKia~~a--~s~~D~l~ll~~~~~~~~~~~~P~I~~~--MG~~G~~SRi~ 218 (257)
T 2yr1_A 148 Y-F----DGTPRKETLLADMRQAERYGADIAKVAVMP--KSPEDVLVLLQATEEARRELAIPLITMA--MGGLGAITRLA 218 (257)
T ss_dssp E-S----SCCCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHCSSCEEEEE--CTTTTHHHHHH
T ss_pred C-C----CCCcCHHHHHHHHHHHHhcCCCEEEEEecc--CCHHHHHHHHHHHHHHhccCCCCEEEEE--CCCCcchHHHH
Confidence 1 1 122235788899999999999999888764 3578888888766542 2333443322 22234566667
Q ss_pred HHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhC
Q 015894 313 SLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGL 353 (398)
Q Consensus 313 Al~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~ 353 (398)
+-..|-...-+++. + +- ..|+.+.+++...|+.+
T Consensus 219 ~~~~GS~~Tf~~l~---~-~s---APGQl~~~el~~~l~~l 252 (257)
T 2yr1_A 219 GWLFGSAVTFAVGN---Q-SS---APGQIPIDDVRTVLSIL 252 (257)
T ss_dssp GGGGTBCEEECBSS---S-CS---STTCCBHHHHHHHHHHH
T ss_pred HHHhCCceEecCCC---C-CC---CCCCCCHHHHHHHHHHH
Confidence 77778887777773 2 22 46699999998877643
No 127
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=93.88 E-value=0.78 Score=41.85 Aligned_cols=213 Identities=12% Similarity=0.044 Sum_probs=112.2
Q ss_pred ccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe----
Q 015894 97 FVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT---- 172 (398)
Q Consensus 97 ~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~---- 172 (398)
++-+.-.|+|.. ++.+ +.++.+.++|++.||+....- .-.+.+++.+.+++ .+.++.++.
T Consensus 6 ~lg~~~~~~~~~-------~~~~---~~l~~~~~~G~~~vEl~~~~~-----~~~~~~~~~~~l~~-~gl~~~~~~~~~~ 69 (275)
T 3qc0_A 6 GLSINLATIREQ-------CGFA---EAVDICLKHGITAIAPWRDQV-----AAIGLGEAGRIVRA-NGLKLTGLCRGGF 69 (275)
T ss_dssp TEEEEGGGGTTT-------CCHH---HHHHHHHHTTCCEEECBHHHH-----HHHCHHHHHHHHHH-HTCEESCEEEEEC
T ss_pred cceeeeeeccCC-------CCHH---HHHHHHHHcCCCEEEeccccc-----cccCHHHHHHHHHH-cCCceEEeecCCC
Confidence 466666666432 2444 466777899999999975310 01245555555553 234433322
Q ss_pred ---CCH-----------hhHHHHHHcCCCEEEEeccCchHHHhhhcCCC----HHHHHHHHHHHHHHHHhCCCcEEEEEe
Q 015894 173 ---PNL-----------KGFEAAVAAGAKEVAIFASASESFSKSNINCT----IEDSLIRYRDVALAARELSIPVRGYLS 234 (398)
Q Consensus 173 ---~n~-----------~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s----~~~~l~~~~~~v~~ak~~G~~v~~~l~ 234 (398)
++. +.++.|.+.|++.|.+.....+. -..+ .+...+.+.++.++|++.|+.+...-.
T Consensus 70 ~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~-----~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~ 144 (275)
T 3qc0_A 70 FPAPDASGREKAIDDNRRAVDEAAELGADCLVLVAGGLPG-----GSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPL 144 (275)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEEEECBCCCT-----TCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCC-----CCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeEC
Confidence 111 13566778999999887532110 0122 334556677788889999988652211
Q ss_pred eee-cCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCC-CCeEEEEeCCccchHHHHHHH
Q 015894 235 CVV-GCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVP-VDKLAVHFHDTYGQALSNILA 312 (398)
Q Consensus 235 ~~f-g~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p-~~~l~~H~Hnd~GlA~ANala 312 (398)
.-+ +.+...-.+++.+.++++.+- ...=..-|+.=...-.+. ...+++..| +--.++|++|...-
T Consensus 145 ~~~~~~~~~~~~~~~~~~~l~~~~~---~~vg~~~D~~h~~~~~d~---~~~l~~~~~~~~i~~vH~~D~~~~------- 211 (275)
T 3qc0_A 145 HPMYAADRACVNTLGQALDICETLG---PGVGVAIDVYHVWWDPDL---ANQIARAGKMKAILAHHICDWLVP------- 211 (275)
T ss_dssp CGGGTTTTBSCCCHHHHHHHHHHHC---TTEEEEEEHHHHTTCTTH---HHHHHHHHHTTCEEEEEECBCCSS-------
T ss_pred CCcccCCccccCCHHHHHHHHHHhC---cccEEEEEhhhheeCCCH---HHHHHHcCccceEEEEEecCCCCC-------
Confidence 000 001111246777777776553 222223354332221223 334443333 33478899985321
Q ss_pred HHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCC
Q 015894 313 SLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 313 Al~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~ 356 (398)
.+ +. +. +.+ .+ +.|..+...++..|++.|++
T Consensus 212 ---~~-~~----~~--~r~--~~-G~G~id~~~~~~~L~~~gy~ 242 (275)
T 3qc0_A 212 ---TK-DM----LT--DRG--MM-GDGVIDLKGIRRRIEAAGFH 242 (275)
T ss_dssp ---CC-CS----SS--BCB--CT-TSSCCCHHHHHHHHHHTTCC
T ss_pred ---cc-cc----cC--CCc--CC-CCCccCHHHHHHHHHHcCCC
Confidence 01 00 00 111 12 37899999999999987764
No 128
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=93.85 E-value=3.5 Score=36.92 Aligned_cols=162 Identities=12% Similarity=0.116 Sum_probs=97.1
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEE------------eCCHhhHHHHHHc
Q 015894 117 PAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVL------------TPNLKGFEAAVAA 184 (398)
Q Consensus 117 ~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l------------~~n~~~ie~a~~~ 184 (398)
..+...++++.+.++|.+.|++.. . +.++.+++..+..+... .+..+.++.+.++
T Consensus 21 ~~~~~~~~a~~~~~~Ga~~i~~~~------------~-~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~ 87 (223)
T 1y0e_A 21 SSFIMSKMALAAYEGGAVGIRANT------------K-EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIES 87 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEES------------H-HHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHCCCeeeccCC------------H-HHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhC
Confidence 557788999999999999998752 1 33455554444444321 1345678899999
Q ss_pred CCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhC--CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCC
Q 015894 185 GAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAAREL--SIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGC 262 (398)
Q Consensus 185 Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~--G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Ga 262 (398)
|++.|.+....-. +...+ +.++++.+++. |..+.+ . ..++++ +..+.+.|+
T Consensus 88 Gad~v~l~~~~~~-----~p~~~-------~~~~i~~~~~~~~~~~v~~--~---------~~t~~e----~~~~~~~G~ 140 (223)
T 1y0e_A 88 QCEVIALDATLQQ-----RPKET-------LDELVSYIRTHAPNVEIMA--D---------IATVEE----AKNAARLGF 140 (223)
T ss_dssp TCSEEEEECSCSC-----CSSSC-------HHHHHHHHHHHCTTSEEEE--E---------CSSHHH----HHHHHHTTC
T ss_pred CCCEEEEeeeccc-----CcccC-------HHHHHHHHHHhCCCceEEe--c---------CCCHHH----HHHHHHcCC
Confidence 9999887543210 00001 23556777776 766531 1 124444 345778999
Q ss_pred CEEEEccC------cCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccch-HHHHHHHHHHhCCCEEee
Q 015894 263 SEISLGDT------IGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQ-ALSNILASLQMGISTVDS 323 (398)
Q Consensus 263 d~I~L~DT------~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~Gl-A~ANalaAl~aGa~~VD~ 323 (398)
+.|.+.-. .+......-.++++.+++.+. +|+.. +-|. ...++..++++||+.|=.
T Consensus 141 d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~-ipvia----~GGI~~~~~~~~~~~~Gad~v~v 203 (223)
T 1y0e_A 141 DYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVD-AKVIA----EGNVITPDMYKRVMDLGVHCSVV 203 (223)
T ss_dssp SEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCC-SEEEE----ESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCC-CCEEE----ecCCCCHHHHHHHHHcCCCEEEE
Confidence 98865321 111102223456777777653 45554 3455 567888888999886643
No 129
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=93.74 E-value=1.1 Score=40.20 Aligned_cols=156 Identities=15% Similarity=0.077 Sum_probs=87.3
Q ss_pred HHHHHHHHHhcCCCEEEEecCCCCCcccCCCCH---HHHHHHHHhc-c--CCcEEEEeCCHhhHHHHHHcCCCEEEEecc
Q 015894 121 KVELIKLLVSSGLAVVEATSFVSPKWVPQLADA---KDVMAAIQNV-E--GARFPVLTPNLKGFEAAVAAGAKEVAIFAS 194 (398)
Q Consensus 121 k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~---~~v~~~i~~~-~--~~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~ 194 (398)
-.+.++.+.+.|++.|++..+..+. ... .++.+.++.+ . ++.+. +. ..++.+.++|++.|++-.
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~v~v~--v~--~~~~~a~~~gad~v~l~~- 102 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGDA-----LTGEARIKFAEKAQAACREAGVPFI--VN--DDVELALNLKADGIHIGQ- 102 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTTC-----CCHHHHHHHHHHHHHHHHHHTCCEE--EE--SCHHHHHHHTCSEEEECT-
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCH-----hHHHHHHHHHHHHHHHHHHcCCeEE--Ec--CHHHHHHHcCCCEEEECC-
Confidence 4678889999999999998653221 222 3444444422 1 33332 21 467889999999998732
Q ss_pred CchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE---ccCc
Q 015894 195 ASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL---GDTI 271 (398)
Q Consensus 195 ~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L---~DT~ 271 (398)
.+. . +. +..+..|. +...++. .+++. +..+.+.|+|.|.+ -||.
T Consensus 103 -~~~--------~----~~------~~~~~~g~-~~~~~s~---------~t~~e----~~~a~~~g~d~v~~~~v~~t~ 149 (227)
T 2tps_A 103 -EDA--------N----AK------EVRAAIGD-MILGVSA---------HTMSE----VKQAEEDGADYVGLGPIYPTE 149 (227)
T ss_dssp -TSS--------C----HH------HHHHHHTT-SEEEEEE---------CSHHH----HHHHHHHTCSEEEECCSSCCC
T ss_pred -Ccc--------C----HH------HHHHhcCC-cEEEEec---------CCHHH----HHHHHhCCCCEEEECCCcCCC
Confidence 110 0 11 11223454 2222221 24444 33455789999986 3543
Q ss_pred Cc---CCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeec
Q 015894 272 GV---GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 272 G~---~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
+- ..|.. .+.++.+++..+..|+.. .-|....|+..++++|++.|++.
T Consensus 150 ~~~~~~~~~~-~~~l~~~~~~~~~~pvia----~GGI~~~nv~~~~~~Ga~gv~vg 200 (227)
T 2tps_A 150 TKKDTRAVQG-VSLIEAVRRQGISIPIVG----IGGITIDNAAPVIQAGADGVSMI 200 (227)
T ss_dssp SSSSCCCCCT-THHHHHHHHTTCCCCEEE----ESSCCTTTSHHHHHTTCSEEEES
T ss_pred CCCCCCCccC-HHHHHHHHHhCCCCCEEE----EcCCCHHHHHHHHHcCCCEEEEh
Confidence 21 22322 345566666554345544 24555667777888999988775
No 130
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=93.73 E-value=2.7 Score=41.09 Aligned_cols=132 Identities=14% Similarity=0.167 Sum_probs=89.3
Q ss_pred HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHH-hCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHH
Q 015894 178 FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAAR-ELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQ 256 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak-~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~ 256 (398)
++.+.+-|+..+-++.. +. ....-|.+.++.++.+.+.++.++ +.|+.++.-+++. -..+++...+.++.
T Consensus 87 l~~~~~dgV~y~Eir~~--P~-~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~------R~~~~~~a~~~l~~ 157 (343)
T 3rys_A 87 LERAAAGGVRHAEIMMD--PQ-AHTSRGVALETCVNGVANALATSEEDFGVSTLLIAAFL------RDMSEDSALEVLDQ 157 (343)
T ss_dssp HHHHHHTTEEEEEEEEC--HH-HHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEEEEEEE------TTSCHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEEEec--HH-HhccCCCCHHHHHHHHHHHHHHHhhcCceeEEEEEEeC------CCCCHHHHHHHHHH
Confidence 34556778887776543 32 223457899999999888888775 5688877544431 12466777777776
Q ss_pred HHhC--CCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHH-hCCCEEe
Q 015894 257 LYDM--GCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ-MGISTVD 322 (398)
Q Consensus 257 l~~~--Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~-aGa~~VD 322 (398)
+.++ ++..|-|+-.-....|....+.++..++. +.++.+|+..+.+ ..+...|+. .|+++|+
T Consensus 158 a~~~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~--gl~~~~HagE~~~--~~~i~~al~~lg~~rIg 222 (343)
T 3rys_A 158 LLAMHAPIAGIGLDSAEVGNPPSKFERLYQRAAEA--GLRRIAHAGEEGP--ASYITEALDVLHVERID 222 (343)
T ss_dssp HHHTTCCCCEEEEESCCTTCCGGGGHHHHHHHHHT--TCEEEEEESSSSC--HHHHHHHHHTSCCSEEE
T ss_pred HHhCCCCEEEEecCCcccCCCHHHHHHHHHHHHHC--CCeEEEeeCCCCC--HHHHHHHHhcCCcceee
Confidence 6665 35556554333445778888888777653 4678999988765 467788997 9999875
No 131
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=93.67 E-value=0.56 Score=47.52 Aligned_cols=85 Identities=16% Similarity=0.189 Sum_probs=60.7
Q ss_pred HhhHHHHHHcCCCEEEEec-cCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHHH
Q 015894 175 LKGFEAAVAAGAKEVAIFA-SASESFSKSNINCTIEDSLIRYRDVALAARELSIP-VRGYLSCVVGCPVEGMVPPSKVAY 252 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~-~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~-v~~~l~~~fg~~~~~r~~~~~l~~ 252 (398)
.+-++...++|+..|.+-+ +.+|-.. ..+|+. ...+.+.++++.+++.|+. +.+.++ +|.|.. +.+.+.+
T Consensus 153 ~e~l~~L~~~G~~rislGvQS~~~~~l-~~i~R~--~~~~~~~~ai~~~r~~G~~~v~~dlI--~GlPge---t~e~~~~ 224 (457)
T 1olt_A 153 LDVLDHLRAEGFNRLSMGVQDFNKEVQ-RLVNRE--QDEEFIFALLNHAREIGFTSTNIDLI--YGLPKQ---TPESFAF 224 (457)
T ss_dssp THHHHHHHHTTCCEEEEEEECCCHHHH-HHHTCC--CCHHHHHHHHHHHHHTTCCSCEEEEE--ESCTTC---CHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeeccCCHHHH-HHhCCC--CCHHHHHHHHHHHHHcCCCcEEEEEE--cCCCCC---CHHHHHH
Confidence 4567888899999888854 3444333 334432 2245566778899999998 877776 566654 5788899
Q ss_pred HHHHHHhCCCCEEEE
Q 015894 253 VSKQLYDMGCSEISL 267 (398)
Q Consensus 253 ~a~~l~~~Gad~I~L 267 (398)
.++.+.++|++.|.+
T Consensus 225 tl~~~~~l~~~~i~~ 239 (457)
T 1olt_A 225 TLKRVAELNPDRLSV 239 (457)
T ss_dssp HHHHHHHHCCSEEEE
T ss_pred HHHHHHhcCcCEEEe
Confidence 999999999998765
No 132
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=93.62 E-value=4.6 Score=37.65 Aligned_cols=201 Identities=16% Similarity=0.138 Sum_probs=97.8
Q ss_pred HHHHHHHHHhcCCCEEEEecCCCCC-cc-cCC--CCHHHHHHHHHhccCC-cEEEEeC---C------H-----------
Q 015894 121 KVELIKLLVSSGLAVVEATSFVSPK-WV-PQL--ADAKDVMAAIQNVEGA-RFPVLTP---N------L----------- 175 (398)
Q Consensus 121 k~~ia~~L~~aGv~~IEvG~~~~~~-~~-p~~--~D~~~v~~~i~~~~~~-~l~~l~~---n------~----------- 175 (398)
-.+.++.+.++|++.||+... .|. |. +.+ .+.+++.+.++. .+. .+++..+ | .
T Consensus 20 ~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~~~~~~~~~~~l~~-~gl~~~~~h~~~~~nl~s~d~~~~r~~~~~~~~ 97 (303)
T 3aal_A 20 LLAASEEAASYGANTFMIYTG-APQNTKRKSIEELNIEAGRQHMQA-HGIEEIVVHAPYIINIGNTTNLDTFSLGVDFLR 97 (303)
T ss_dssp HHHHHHHHHHTTCSEEEEESS-CTTCCCCCCSGGGCHHHHHHHHHH-TTCCEEEEECCTTCCTTCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcCC-CCCccCCCCCCHHHHHHHHHHHHH-cCCceEEEeccccccCCCCCcHHHHHHHHHHHH
Confidence 355677788999999999422 221 11 111 345555555543 233 3444332 1 1
Q ss_pred hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHh--CCCcEEEEEeeeecCCCCCCCCHHHHHHH
Q 015894 176 KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARE--LSIPVRGYLSCVVGCPVEGMVPPSKVAYV 253 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~--~G~~v~~~l~~~fg~~~~~r~~~~~l~~~ 253 (398)
+.++.|.+.|++.|.+..... .+.+.++.++++.+.++.+-+ .|+.+ .+....+.+..--.+++.+.++
T Consensus 98 ~~i~~A~~lGa~~vv~h~g~~-------~~~~~~~~~~~~~~~l~~l~~~a~gv~l--~lEn~~~~~~~~~~t~~~~~~l 168 (303)
T 3aal_A 98 AEIERTEAIGAKQLVLHPGAH-------VGAGVEAGLRQIIRGLNEVLTREQNVQI--ALETMAGKGSECGRTFEELAYI 168 (303)
T ss_dssp HHHHHHHHHTCSEEEECCEEC-------TTSCHHHHHHHHHHHHHHHCCSSCSCEE--EEECCCCCTTEECSSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCcC-------CCCCHHHHHHHHHHHHHHHHHhCCCCEE--EEecCCCCCCccCCCHHHHHHH
Confidence 113456667888776643311 122556666666665554432 24333 2332111000001256666665
Q ss_pred HHHHHhCCC-CEEE-EccCcCc----CCHH-HHHHHHHHHHhhCC-CCeEEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 254 SKQLYDMGC-SEIS-LGDTIGV----GTPG-TVIPMLEAVLDAVP-VDKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 254 a~~l~~~Ga-d~I~-L~DT~G~----~~P~-~v~~lv~~l~~~~p-~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
++. .+- +.+. .-||.=. ..|. .+.++++.+.+.+. +--.++|+||..+-- |.. .|
T Consensus 169 i~~---v~~~~~vg~~lD~~H~~~~g~d~~~~~~~~l~~~~~~~g~~~i~~vHl~D~~~~~----------~~~-~d--- 231 (303)
T 3aal_A 169 IDG---VAYNDKLSVCFDTCHTHDAGYDIVNDFDGVLEEFDRIIGLGRLKVLHINDSKNPR----------GSR-KD--- 231 (303)
T ss_dssp HHH---CTTGGGEEEEEEHHHHHHHTCCHHHHHHHHHHHHHHHTCGGGEEEEEECEESSCT----------TCC-CC---
T ss_pred HHh---cCCCCCEEEEEEccCHhhhCCChhhhHHHHHHHHHHhcCcccEEEEEeeCCCCcC----------CCC-Cc---
Confidence 543 331 2222 2255311 1222 34555665544443 334778888875410 110 00
Q ss_pred ccCCCCCCCCCCCCCccHHHHHHHHHhCCC
Q 015894 326 SGLGGCPYAKGASGNVATEDVVYMLNGLGV 355 (398)
Q Consensus 326 ~GlGecp~a~graGNa~lE~vv~~L~~~Gi 355 (398)
+ ...+ +.|..+.+.++..|++.|+
T Consensus 232 ----~-h~~~-G~G~id~~~~~~~L~~~gy 255 (303)
T 3aal_A 232 ----R-HENI-GFGHIGFAALNYIVHHPQL 255 (303)
T ss_dssp ----C-EECT-TSSSSCHHHHHHHHTCTTC
T ss_pred ----C-CCCC-CCCCCCHHHHHHHHhCcCc
Confidence 0 0011 3578999999999997655
No 133
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=93.60 E-value=1.2 Score=42.28 Aligned_cols=169 Identities=12% Similarity=0.087 Sum_probs=89.3
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCc--ccCC-----------CCHH---HHHHHHHhccCCcEEEEeC-CH---
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKW--VPQL-----------ADAK---DVMAAIQNVEGARFPVLTP-NL--- 175 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~--~p~~-----------~D~~---~v~~~i~~~~~~~l~~l~~-n~--- 175 (398)
.+.+.-+++++.|.+. +|.||+|.|.+.+. .|.. -..+ +.++.+|+.+++.+..+.. |.
T Consensus 27 P~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y~n~v~~ 105 (271)
T 1ujp_A 27 PSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNPVLA 105 (271)
T ss_dssp SCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECCHHHHHH
T ss_pred CChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHH
Confidence 3556778899999999 99999998765321 0100 0112 2233334334666666653 41
Q ss_pred ----hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHH
Q 015894 176 ----KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVA 251 (398)
Q Consensus 176 ----~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~ 251 (398)
+-++.+.++|++.+-+..-.. +...+.++.++++|+.... ++ .| .++.+.+.
T Consensus 106 ~g~~~f~~~~~~aG~dGviv~Dl~~----------------ee~~~~~~~~~~~gl~~i~-li----ap---~s~~eri~ 161 (271)
T 1ujp_A 106 WGPERFFGLFKQAGATGVILPDLPP----------------DEDPGLVRLAQEIGLETVF-LL----AP---TSTDARIA 161 (271)
T ss_dssp HCHHHHHHHHHHHTCCEEECTTCCG----------------GGCHHHHHHHHHHTCEEEC-EE----CT---TCCHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEecCCCH----------------HHHHHHHHHHHHcCCceEE-Ee----CC---CCCHHHHH
Confidence 235678889999776643321 2344667888999986431 22 12 13455544
Q ss_pred HHHHHHHhCCCCEEEEc---cCcCcCC--HHHHHHHHHHHHhhCCCCeE--EEEeCCccchHHHHHHHHHHhCCCEE
Q 015894 252 YVSKQLYDMGCSEISLG---DTIGVGT--PGTVIPMLEAVLDAVPVDKL--AVHFHDTYGQALSNILASLQMGISTV 321 (398)
Q Consensus 252 ~~a~~l~~~Gad~I~L~---DT~G~~~--P~~v~~lv~~l~~~~p~~~l--~~H~Hnd~GlA~ANalaAl~aGa~~V 321 (398)
.+++ .+...+++. -++|.-+ +..+.++++.+++.. +.|+ ++-.|+ ....+.+ +||+.|
T Consensus 162 ~ia~----~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGI~t------~e~a~~~-~~ADgV 226 (271)
T 1ujp_A 162 TVVR----HATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART-ALPVAVGFGVSG------KATAAQA-AVADGV 226 (271)
T ss_dssp HHHT----TCCSCEEEECC------------CCHHHHHHHHTTC-CSCEEEESCCCS------HHHHHHH-TTSSEE
T ss_pred HHHH----hCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc-CCCEEEEcCCCC------HHHHHHh-cCCCEE
Confidence 4443 333334333 2334333 344568899998865 3444 443332 2233334 888744
No 134
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=93.57 E-value=1.1 Score=44.32 Aligned_cols=140 Identities=13% Similarity=0.044 Sum_probs=83.3
Q ss_pred HHHHHcCCCEEEEeccC--------chH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEeee-ecCCCCCCC
Q 015894 179 EAAVAAGAKEVAIFASA--------SES--FSKSNINCTIEDSLIRYRDVALAAREL-SI-PVRGYLSCV-VGCPVEGMV 245 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~--------Sd~--~~~~~~~~s~~~~l~~~~~~v~~ak~~-G~-~v~~~l~~~-fg~~~~~r~ 245 (398)
++|.++|.|.|.|-..- |+. .....+|-+.++-.+.+.++++.+|+. |. .|.+-++.. +.....+..
T Consensus 168 ~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~ 247 (365)
T 2gou_A 168 LNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDAD 247 (365)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSS
T ss_pred HHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCC
Confidence 35578999999985432 222 122344556666666677777777654 43 555444421 000011234
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhC-CCEEee
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMG-ISTVDS 323 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aG-a~~VD~ 323 (398)
+.+...++++.+.++|++.|.+....-...|..-.++++.+++.++. ||..=+-- -..++..+++.| |+.|-.
T Consensus 248 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~i-Pvi~~Ggi----~~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 248 PILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQG-VLIYAGRY----NAEKAEQAINDGLADMIGF 321 (365)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCS-EEEEESSC----CHHHHHHHHHTTSCSEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCC-cEEEeCCC----CHHHHHHHHHCCCcceehh
Confidence 67888999999999999999886531000111112567888888753 44332222 257788889998 887644
No 135
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.56 E-value=2.9 Score=40.09 Aligned_cols=177 Identities=15% Similarity=0.144 Sum_probs=102.7
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHh-CCCcEEEEEeeeecCCCCC
Q 015894 165 GARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARE-LSIPVRGYLSCVVGCPVEG 243 (398)
Q Consensus 165 ~~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~-~G~~v~~~l~~~fg~~~~~ 243 (398)
+..+-+.+.+.+++..|.+.|+++|.+...... =|.|+.. ..++.+++ ..++|.+-|- |..+
T Consensus 39 ~~~lEvc~~s~~~a~~A~~gGAdRIELc~~l~~------GGlTPS~------g~i~~a~~~~~ipV~vMIR-----PRgG 101 (287)
T 3iwp_A 39 GFLMEVCVDSVESAVNAERGGADRIELCSGLSE------GGTTPSM------GVLQVVKQSVQIPVFVMIR-----PRGG 101 (287)
T ss_dssp CSEEEEEESSHHHHHHHHHHTCSEEEECBCGGG------TCBCCCH------HHHHHHHTTCCSCEEEECC-----SSSS
T ss_pred CceEEEEeCCHHHHHHHHHhCCCEEEECCCCCC------CCCCCCH------HHHHHHHHhcCCCeEEEEe-----cCCC
Confidence 456667778999999999999999999855221 1223221 22344444 3566653222 3322
Q ss_pred --CCCHHHHH---HHHHHHHhCCCCEEEEc--cCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccc-hHHHHHHHHHH
Q 015894 244 --MVPPSKVA---YVSKQLYDMGCSEISLG--DTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYG-QALSNILASLQ 315 (398)
Q Consensus 244 --r~~~~~l~---~~a~~l~~~Gad~I~L~--DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~G-lA~ANalaAl~ 315 (398)
-|+.+++. +-++.+.++|+|.|.+. +.-|......+.++++... ..++.||---|.= -.....-..++
T Consensus 102 dF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~----~l~vTFHRAFD~~~d~~~Ale~Li~ 177 (287)
T 3iwp_A 102 DFLYSDREIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICR----PLPVTFHRAFDMVHDPMAALETLLT 177 (287)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT----TSCEEECGGGGGCSCHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC----CCcEEEECchhccCCHHHHHHHHHH
Confidence 35555444 45677888999999887 4567778888888888653 2457777663321 12333334445
Q ss_pred hCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCC----CCccChHHHHHHHH
Q 015894 316 MGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGV----RTNVDIRKLMIAGD 369 (398)
Q Consensus 316 aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi----~t~iDl~~L~~~~~ 369 (398)
.|+++|=+|=. . |-| -.|..-+.+++..... .+ .-||+.+.+.++.+
T Consensus 178 lGvdrILTSG~---~-~~a--~~Gl~~Lk~Lv~~a~~-rI~ImaGGGV~~~Ni~~l~~ 228 (287)
T 3iwp_A 178 LGFERVLTSGC---D-SSA--LEGLPLIKRLIEQAKG-RIVVMPGGGITDRNLQRILE 228 (287)
T ss_dssp HTCSEEEECTT---S-SST--TTTHHHHHHHHHHHTT-SSEEEECTTCCTTTHHHHHH
T ss_pred cCCCEEECCCC---C-CCh--HHhHHHHHHHHHHhCC-CCEEEECCCcCHHHHHHHHH
Confidence 69999977422 1 111 2333334444333221 12 24688887777654
No 136
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=93.53 E-value=1.8 Score=40.49 Aligned_cols=101 Identities=15% Similarity=0.074 Sum_probs=60.8
Q ss_pred HHHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCc-------------------CcCC
Q 015894 216 RDVALAARELSIP-VRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTI-------------------GVGT 275 (398)
Q Consensus 216 ~~~v~~ak~~G~~-v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~-------------------G~~~ 275 (398)
.+..+.+|+.|-. +.+|++ .+..+.+...++++.+.+.|+|.|-|.=-. ..++
T Consensus 5 ~~~f~~~~~~~~~~~i~~i~-------~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~ 77 (262)
T 2ekc_A 5 SDKFTELKEKREKALVSYLM-------VGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIR 77 (262)
T ss_dssp HHHHHHHHHHTBCEEEEEEE-------TTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCceEEEEec-------CCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCC
Confidence 3444445544443 345554 233467888999999999999987763211 1134
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEeCCc--cchHHHH-HHHHHHhCCCEEee
Q 015894 276 PGTVIPMLEAVLDAVPVDKLAVHFHDT--YGQALSN-ILASLQMGISTVDS 323 (398)
Q Consensus 276 P~~v~~lv~~l~~~~p~~~l~~H~Hnd--~GlA~AN-alaAl~aGa~~VD~ 323 (398)
...+.++++.+++.+|++|+.+=.-.+ +..++.+ +-.+.++|++.+-.
T Consensus 78 ~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii 128 (262)
T 2ekc_A 78 FEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIV 128 (262)
T ss_dssp HHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEE
Confidence 456778899999988777887721111 1111122 23466899996655
No 137
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=93.44 E-value=4.8 Score=38.70 Aligned_cols=146 Identities=16% Similarity=0.208 Sum_probs=90.6
Q ss_pred CcEEEEe-CCHhhHHHHHHcCCCEEEEec-cCc-hHHHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC
Q 015894 166 ARFPVLT-PNLKGFEAAVAAGAKEVAIFA-SAS-ESFSKSN-INCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV 241 (398)
Q Consensus 166 ~~l~~l~-~n~~~ie~a~~~Gv~~v~i~~-~~S-d~~~~~~-~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~ 241 (398)
-.+.++. .+.-....+.++|++.|.+.. +++ -.+-..- ...|.++.+..++.+.+. ..+.|.+.+ |.
T Consensus 22 ~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~---~~~PviaD~------d~ 92 (298)
T 3eoo_A 22 QPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNA---TNLPLLVDI------DT 92 (298)
T ss_dssp SSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHH---CCSCEEEEC------TT
T ss_pred CcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhh---cCCeEEEEC------CC
Confidence 3455554 344444556678999888854 333 1111111 134788888888766654 345554322 33
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEccCcC-----------cCCHHHHHHHHHHHHhhC--CCCeEEEEeCCc----cc
Q 015894 242 EGMVPPSKVAYVSKQLYDMGCSEISLGDTIG-----------VGTPGTVIPMLEAVLDAV--PVDKLAVHFHDT----YG 304 (398)
Q Consensus 242 ~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~--p~~~l~~H~Hnd----~G 304 (398)
.+ -+++.+.+.++.+.+.|+..|.|-|..+ +....+..+.|++.++.- ++.-|-.-+-.- +.
T Consensus 93 Gy-g~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gld 171 (298)
T 3eoo_A 93 GW-GGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGID 171 (298)
T ss_dssp CS-SSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHH
T ss_pred CC-CCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHH
Confidence 22 3788888999999999999999999986 334456666676666554 333333333221 22
Q ss_pred hHHHHHHHHHHhCCCEE
Q 015894 305 QALSNILASLQMGISTV 321 (398)
Q Consensus 305 lA~ANalaAl~aGa~~V 321 (398)
-|+.-+.+-.+||||.|
T Consensus 172 eai~Ra~ay~~AGAD~i 188 (298)
T 3eoo_A 172 AAIERAIAYVEAGADMI 188 (298)
T ss_dssp HHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHhhHhcCCCEE
Confidence 37788888899999965
No 138
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=93.43 E-value=4.1 Score=38.70 Aligned_cols=179 Identities=14% Similarity=0.053 Sum_probs=111.2
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEecCCC---CCcccCCCCHHHHHHHHHhc---cCCcEEEEeCCHhhHHHHHHcCCCEEE
Q 015894 117 PAVVKVELIKLLVSSGLAVVEATSFVS---PKWVPQLADAKDVMAAIQNV---EGARFPVLTPNLKGFEAAVAAGAKEVA 190 (398)
Q Consensus 117 ~~~~k~~ia~~L~~aGv~~IEvG~~~~---~~~~p~~~D~~~v~~~i~~~---~~~~l~~l~~n~~~ie~a~~~Gv~~v~ 190 (398)
+.++-+++++.+.++|.+.+-.+.+-. +.....+ . ++-++.+++. .+..+..=......++.+.+. ++.+.
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~-g-~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~k 126 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGL-G-LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY-ADMLQ 126 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCC-T-HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH-CSEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCC-C-HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh-CCeEE
Confidence 788999999999999999988876532 2111011 1 2333444422 244443333577788888888 89998
Q ss_pred EeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHhCCCCEEEEcc
Q 015894 191 IFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGM-VPPSKVAYVSKQLYDMGCSEISLGD 269 (398)
Q Consensus 191 i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r-~~~~~l~~~a~~l~~~Gad~I~L~D 269 (398)
|-...-. .. ..++++-+.|.+|. ++ .+. .+++.+...++.+...|.+.+.|+-
T Consensus 127 Igs~~~~----------n~-------~ll~~~a~~~kPV~--lk-------~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~ 180 (276)
T 1vs1_A 127 IGARNMQ----------NF-------PLLREVGRSGKPVL--LK-------RGFGNTVEELLAAAEYILLEGNWQVVLVE 180 (276)
T ss_dssp ECGGGTT----------CH-------HHHHHHHHHTCCEE--EE-------CCTTCCHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ECccccc----------CH-------HHHHHHHccCCeEE--Ec-------CCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 8543211 11 23344446688875 33 233 3899999999999999987777766
Q ss_pred ----CcCcCCHHHHHHH-HHHHHhhCCCCeEE-EEeC--CccchHHHHHHHHHHhCCC--EEeecc
Q 015894 270 ----TIGVGTPGTVIPM-LEAVLDAVPVDKLA-VHFH--DTYGQALSNILASLQMGIS--TVDSSV 325 (398)
Q Consensus 270 ----T~G~~~P~~v~~l-v~~l~~~~p~~~l~-~H~H--nd~GlA~ANalaAl~aGa~--~VD~Sv 325 (398)
|.-...+..+.-. +..+++.+. .||. .=.| ...-+...-+++|+.+||+ +|+.=+
T Consensus 181 Rg~~~yp~y~~~~vdl~~i~~lk~~~~-lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 181 RGIRTFEPSTRFTLDVAAVAVLKEATH-LPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp CCBCCSCCSSSSBCBHHHHHHHHHHBS-SCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CCcCCCCCcCcchhCHHHHHHHHHHhC-CCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 2212234444443 667777653 3564 3333 3333457778889999999 887654
No 139
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=93.40 E-value=0.7 Score=45.79 Aligned_cols=72 Identities=10% Similarity=0.082 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEE-EeCCccchHHHHHHHHHHhCCCEEeeccc
Q 015894 248 SKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAV-HFHDTYGQALSNILASLQMGISTVDSSVS 326 (398)
Q Consensus 248 ~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~-H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~ 326 (398)
+...+.++++.++|+|.|.+ |+.- ..+..+.+.|+.+++.+|+++|.. -. .....+..++++|||.|.+++.
T Consensus 99 ~~~~e~~~~a~~aGvdvI~i-d~a~-G~~~~~~e~I~~ir~~~~~~~Vi~G~V-----~T~e~A~~a~~aGaD~I~Vg~g 171 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCV-DVAH-AHAKYVGKTLKSLRQLLGSRCIMAGNV-----ATYAGADYLASCGADIIKAGIG 171 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEE-ECSC-CSSHHHHHHHHHHHHHHTTCEEEEEEE-----CSHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHHHHcCCCEEEE-eCCC-CCcHhHHHHHHHHHHhcCCCeEEEcCc-----CCHHHHHHHHHcCCCEEEEcCC
Confidence 56677899999999997766 4322 246778889999999888766665 22 2346688899999999998644
No 140
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=93.36 E-value=1.2 Score=45.28 Aligned_cols=154 Identities=11% Similarity=0.091 Sum_probs=85.7
Q ss_pred CCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCC-CCCcccCCCCHHHHHHH---HHhc-------
Q 015894 95 PGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFV-SPKWVPQLADAKDVMAA---IQNV------- 163 (398)
Q Consensus 95 p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~-~~~~~p~~~D~~~v~~~---i~~~------- 163 (398)
|.=+-|+-+|. |-..--| ++.+..++.++.+.+.|.+.|++|.-. .|...+ ....+|+.+. ++.+
T Consensus 191 ~~vMGIlNvTP-DSFsDgg--~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~-Vs~~EE~~Rv~pvI~~l~~~~~~~ 266 (442)
T 3mcm_A 191 TIRMGIVNLSN-QSFSDGN--FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKP-ISIEEEFNKLNEFLEYFKSQLANL 266 (442)
T ss_dssp SEEEEEEECSS-CC-CCCS--SCCCHHHHHHHHHHHHTCSEEEEECCCCCC-----CCHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ceEEEEEeCCC-CCCCCCC--CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC-CCHHHHHHHHHHHHHHHHhhcccc
Confidence 33355777776 4333323 677888999999999999999999643 232211 1122333332 2222
Q ss_pred c-CCcEEEEeCCHhhHHHHHH--cCCCE-EEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC
Q 015894 164 E-GARFPVLTPNLKGFEAAVA--AGAKE-VAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGC 239 (398)
Q Consensus 164 ~-~~~l~~l~~n~~~ie~a~~--~Gv~~-v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~ 239 (398)
+ ++.+++=+.+.+-+++|++ +|++. |.=.... ...++.+.+++.|..+. +|..-|.
T Consensus 267 ~~~vpISIDT~~~~VaeaAL~~~aGa~i~INDVsg~------------------~d~~m~~v~a~~g~~vV--lMh~~G~ 326 (442)
T 3mcm_A 267 IYKPLVSIDTRKLEVMQKILAKHHDIIWMINDVECN------------------NIEQKAQLIAKYNKKYV--IIHNLGI 326 (442)
T ss_dssp SSCCEEEEECCCHHHHHHHHHHHGGGCCEEEECCCT------------------THHHHHHHHHHHTCEEE--EECC---
T ss_pred CCCCeEEEeCCCHHHHHHHHhhCCCCCEEEEcCCCC------------------CChHHHHHHHHhCCeEE--EECCCCC
Confidence 1 4444444567788899999 99987 6532111 01245667778887765 4544343
Q ss_pred CCCCCC---------CHHHHHHHHHHHHhCCCC--EEEEccC-cCc
Q 015894 240 PVEGMV---------PPSKVAYVSKQLYDMGCS--EISLGDT-IGV 273 (398)
Q Consensus 240 ~~~~r~---------~~~~l~~~a~~l~~~Gad--~I~L~DT-~G~ 273 (398)
|..-.. =.+++.+.++.+.++|++ .|.| |- +|.
T Consensus 327 P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~Iil-DPGiGF 371 (442)
T 3mcm_A 327 TDRNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIYF-DIGFGF 371 (442)
T ss_dssp -------------CTHHHHHHHHHHHHHHHTCCGGGEEE-ECCCC-
T ss_pred CccccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEE-eCCCCC
Confidence 321100 035667778888899983 4554 43 443
No 141
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=93.31 E-value=0.67 Score=43.68 Aligned_cols=149 Identities=14% Similarity=0.045 Sum_probs=100.4
Q ss_pred HHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-CCCCCCCHHHHHHHHHHHHhC
Q 015894 182 VAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGC-PVEGMVPPSKVAYVSKQLYDM 260 (398)
Q Consensus 182 ~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~-~~~~r~~~~~l~~~a~~l~~~ 260 (398)
...-+|.+-+....|-.+. + +.+++.++.++++|+.|. +|. ..+.......+.++.+.+.++
T Consensus 35 ~g~yID~lKfg~Gt~~l~~--------~---~~l~eki~l~~~~gV~v~------~GGTl~E~~~~qg~~~~yl~~~k~l 97 (251)
T 1qwg_A 35 CGDYIDFVKFGWGTSAVID--------R---DVVKEKINYYKDWGIKVY------PGGTLFEYAYSKGKFDEFLNECEKL 97 (251)
T ss_dssp HGGGCSEEEECTTGGGGSC--------H---HHHHHHHHHHHTTTCEEE------ECHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhhcceEEecCceeeecC--------H---HHHHHHHHHHHHcCCeEE------CCcHHHHHHHHcCcHHHHHHHHHHc
Confidence 3345899999877766542 2 235677999999999875 221 011001112445567778899
Q ss_pred CCCEEEEccCcCcCCHHHHHHHHHHHHhh-CCCCeEEEEe-------CCccchHHHHHHHHHHhCCCEE--eeccc----
Q 015894 261 GCSEISLGDTIGVGTPGTVIPMLEAVLDA-VPVDKLAVHF-------HDTYGQALSNILASLQMGISTV--DSSVS---- 326 (398)
Q Consensus 261 Gad~I~L~DT~G~~~P~~v~~lv~~l~~~-~p~~~l~~H~-------Hnd~GlA~ANalaAl~aGa~~V--D~Sv~---- 326 (398)
|.+.|-|.|-+--+.+.+-.++|+.+++. +- +..++.. --+...-+..+...++|||+.| ++-=.
T Consensus 98 Gf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~-v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~~i 176 (251)
T 1qwg_A 98 GFEAVEISDGSSDISLEERNNAIKRAKDNGFM-VLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGKGK 176 (251)
T ss_dssp TCCEEEECCSSSCCCHHHHHHHHHHHHHTTCE-EEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECCTTTCCSS
T ss_pred CCCEEEECCCcccCCHHHHHHHHHHHHHCCCE-EeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEeeecccCCc
Confidence 99999999999999999999999999887 32 1233322 2345666788888999999965 44322
Q ss_pred cCCCCCCCCCCCCCccHHHHHHHHHhCC
Q 015894 327 GLGGCPYAKGASGNVATEDVVYMLNGLG 354 (398)
Q Consensus 327 GlGecp~a~graGNa~lE~vv~~L~~~G 354 (398)
|+=+ ..|+.-...+-..+...+
T Consensus 177 Gi~~------~~g~~r~d~v~~i~~~l~ 198 (251)
T 1qwg_A 177 GLFD------KEGKVKENELDVLAKNVD 198 (251)
T ss_dssp TTBC------TTSCBCHHHHHHHHTTSC
T ss_pred ccCC------CCCCCcHHHHHHHHHhCC
Confidence 5556 788888887765554443
No 142
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=93.17 E-value=4.1 Score=40.14 Aligned_cols=180 Identities=14% Similarity=0.113 Sum_probs=111.6
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEecCCC---CCcccCCCCHHHHHHHHHhc---cCCcEEEEeCCHhhHHHHHHcCCCEEE
Q 015894 117 PAVVKVELIKLLVSSGLAVVEATSFVS---PKWVPQLADAKDVMAAIQNV---EGARFPVLTPNLKGFEAAVAAGAKEVA 190 (398)
Q Consensus 117 ~~~~k~~ia~~L~~aGv~~IEvG~~~~---~~~~p~~~D~~~v~~~i~~~---~~~~l~~l~~n~~~ie~a~~~Gv~~v~ 190 (398)
+.++-+++++.+.++|.+.+-.+.|-. |...-.+ . ++-++.+++. .+..+..=......++.+.+. ++.+.
T Consensus 118 s~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~gl-g-~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~-vd~lk 194 (350)
T 1vr6_A 118 GREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGL-G-EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEY-ADIIQ 194 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCC-T-HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHH-CSEEE
T ss_pred CHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCC-C-HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHh-CCEEE
Confidence 788999999999999999988876532 2111111 1 2333444322 244433333477888888888 89998
Q ss_pred EeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHhCCCCEEEEcc
Q 015894 191 IFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGM-VPPSKVAYVSKQLYDMGCSEISLGD 269 (398)
Q Consensus 191 i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r-~~~~~l~~~a~~l~~~Gad~I~L~D 269 (398)
|-...-. . . .+++++-+.|.+|- ++ .+. .+++.+...++.+...|.+.+.||.
T Consensus 195 IgAr~~~----------n---~----~LL~~va~~~kPVi--lk-------~G~~~tl~ei~~Ave~i~~~GN~~viLce 248 (350)
T 1vr6_A 195 IGARNAQ----------N---F----RLLSKAGSYNKPVL--LK-------RGFMNTIEEFLLSAEYIANSGNTKIILCE 248 (350)
T ss_dssp ECGGGTT----------C---H----HHHHHHHTTCSCEE--EE-------CCTTCCHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ECccccc----------C---H----HHHHHHHccCCcEE--Ec-------CCCCCCHHHHHHHHHHHHHCCCCeEEEEe
Confidence 8543211 1 1 22344446788875 33 233 3889999999999999998888875
Q ss_pred CcC--c--CCHHHHHH-HHHHHHhhCCCCeEEE---EeCCccchHHHHHHHHHHhCCC--EEeeccc
Q 015894 270 TIG--V--GTPGTVIP-MLEAVLDAVPVDKLAV---HFHDTYGQALSNILASLQMGIS--TVDSSVS 326 (398)
Q Consensus 270 T~G--~--~~P~~v~~-lv~~l~~~~p~~~l~~---H~Hnd~GlA~ANalaAl~aGa~--~VD~Sv~ 326 (398)
--+ + -++..+.- .+..+++.+. .|+.+ |.=.+.-+...-+++|+.+||+ +|+.=+.
T Consensus 249 RG~~typ~~~~~~vdl~ai~~lk~~~~-lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~ 314 (350)
T 1vr6_A 249 RGIRTFEKATRNTLDISAVPIIRKESH-LPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPE 314 (350)
T ss_dssp CCBCCSCCSSSSBCCTTHHHHHHHHBS-SCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSC
T ss_pred CCCCCCCCcChhhhhHHHHHHHHHhhC-CCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCC
Confidence 222 1 12233222 3456776643 45655 5544444567788899999999 8876543
No 143
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=93.12 E-value=3 Score=39.05 Aligned_cols=209 Identities=9% Similarity=0.031 Sum_probs=105.4
Q ss_pred ccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeC---
Q 015894 97 FVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTP--- 173 (398)
Q Consensus 97 ~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~--- 173 (398)
++-+.-.++++... ..+.+ + ++.+.++|++.||+.......+.+ .+.+++.+.++. .++++.+.+.
T Consensus 22 klg~~~~~~~~~~~----~~~l~---~-l~~~~~~G~~~vEl~~~~~~~~~~--~~~~~l~~~l~~-~gl~i~~~~~~~~ 90 (309)
T 2hk0_A 22 KHGIYYSYWEHEWS----AKFGP---Y-IEKVAKLGFDIIEVAAHHINEYSD--AELATIRKSAKD-NGIILTAGIGPSK 90 (309)
T ss_dssp EEEEEGGGGCSCTT----SCSHH---H-HHHHHHTTCSEEEEEHHHHTTSCH--HHHHHHHHHHHH-TTCEEEEECCCCS
T ss_pred eeEEehhhcccccc----cccHH---H-HHHHHHhCCCEEEeccCCccccch--hhHHHHHHHHHH-cCCeEEEecCCCC
Confidence 45566556654211 12333 4 667788999999998642111100 123334444432 3455554321
Q ss_pred -------CH-----------hhHHHHHHcCCCEEEEeccCchHHHhhhcCC-CH----HHHHHHHHHHHHHHHhCCCcEE
Q 015894 174 -------NL-----------KGFEAAVAAGAKEVAIFASASESFSKSNINC-TI----EDSLIRYRDVALAARELSIPVR 230 (398)
Q Consensus 174 -------n~-----------~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~-s~----~~~l~~~~~~v~~ak~~G~~v~ 230 (398)
+. +.++.|.+.|++.|.+... +.. -...-.. +. +...+.+.++.++|++.|+.+.
T Consensus 91 ~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~-~~~-g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~ 168 (309)
T 2hk0_A 91 TKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIGGALH-SYW-PIDYSQPVDKAGDYARGVEGINGIADFANDLGINLC 168 (309)
T ss_dssp SSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCCEEEECTT-SCS-SCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeecc-ccc-cccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 11 1245677889998875431 000 0000011 33 3445666777888999998764
Q ss_pred EEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEE-EEccCcCcCC-HHHHHHHHHHHHhhCCCCeEEEEeCCccchHHH
Q 015894 231 GYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEI-SLGDTIGVGT-PGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALS 308 (398)
Q Consensus 231 ~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I-~L~DT~G~~~-P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~A 308 (398)
+...-..+...-.+++.+.++++.+ +.+.+ ..-|+.=... -.+..+.++.+. + --.++|+||...
T Consensus 169 --lEn~~~~~~~~~~~~~~~~~l~~~v---~~~~vg~~~D~~H~~~~g~d~~~~l~~~~---~-~i~~vHl~D~~r---- 235 (309)
T 2hk0_A 169 --IEVLNRFENHVLNTAAEGVAFVKDV---GKNNVKVMLDTFHMNIEEDSFGDAIRTAG---P-LLGHFHTGESNR---- 235 (309)
T ss_dssp --EECCCTTTCSSCCSHHHHHHHHHHH---TCTTEEEEEEHHHHHHHCSCHHHHHHHHG---G-GEEEEEECCTTS----
T ss_pred --EeecccccccccCCHHHHHHHHHHc---CCCCeEEEEehhhHhhcCcCHHHHHHHHH---h-hEEEEEeCCCCC----
Confidence 3211000111224677777766544 33222 2335521111 012233333332 2 247899998621
Q ss_pred HHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCC
Q 015894 309 NILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 309 NalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~ 356 (398)
+ .+ +.|..+...++..|++.|++
T Consensus 236 ----------------------~--~~-G~G~id~~~~~~~L~~~gy~ 258 (309)
T 2hk0_A 236 ----------------------R--VP-GKGRMPWHEIGLALRDINYT 258 (309)
T ss_dssp ----------------------C--CT-TSSCCCHHHHHHHHHHTTCC
T ss_pred ----------------------C--CC-cCCccCHHHHHHHHHHcCCC
Confidence 0 12 36789999999999987664
No 144
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=93.07 E-value=0.61 Score=45.54 Aligned_cols=119 Identities=18% Similarity=0.230 Sum_probs=84.3
Q ss_pred HHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCE-EEEccC-cCcCCHHHHHHHHHHHHhhCCC
Q 015894 215 YRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSE-ISLGDT-IGVGTPGTVIPMLEAVLDAVPV 292 (398)
Q Consensus 215 ~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~-I~L~DT-~G~~~P~~v~~lv~~l~~~~p~ 292 (398)
++++.+.|++.|+-|- .+.. .+.+.+..+.+.+.+.+... |.+.-. ..++....+..++....+.++.
T Consensus 6 ~~~ll~~A~~~~yAV~-AfNv---------~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~ 75 (323)
T 2isw_A 6 LRQMLGEARKHKYGVG-AFNV---------NNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKHPD 75 (323)
T ss_dssp HHHHHHHHHHTTCCEE-EEEC---------CSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHCCceEE-EEee---------CCHHHHHHHHHHHHHhCCCEEEECChhHHHhCCHHHHHHHHHHHHHhcCC
Confidence 3577889999999874 3331 46788999999999999874 444332 2233356677788888877666
Q ss_pred CeEEEEeCCccchHHHHHHHHHHhCCC--EEeeccccCCCCCCCCCCCCCc-cHHHHHHHHHhCC
Q 015894 293 DKLAVHFHDTYGQALSNILASLQMGIS--TVDSSVSGLGGCPYAKGASGNV-ATEDVVYMLNGLG 354 (398)
Q Consensus 293 ~~l~~H~Hnd~GlA~ANalaAl~aGa~--~VD~Sv~GlGecp~a~graGNa-~lE~vv~~L~~~G 354 (398)
+|+.+|. |.|.....+..|+++|.+ ++|+|-..+-+ |. -|.+++...+..|
T Consensus 76 VPValHl--DHg~~~e~i~~ai~~GFtSVMiDgS~~p~eE---------Ni~~Tk~vv~~ah~~g 129 (323)
T 2isw_A 76 IPICIHL--DHGDTLESVKMAIDLGFSSVMIDASHHPFDE---------NVRITKEVVAYAHARS 129 (323)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHTTCSEEEECCTTSCHHH---------HHHHHHHHHHHHHTTT
T ss_pred CcEEEEC--CCCCCHHHHHHHHHcCCCeEEecCCCCCHHH---------HHHHHHHHHHHHHHcC
Confidence 7777765 556667889999999998 67999877666 55 4566666665443
No 145
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=93.05 E-value=2.1 Score=41.00 Aligned_cols=109 Identities=18% Similarity=0.182 Sum_probs=70.9
Q ss_pred EeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCC---HH---HHHHHHHHHHhhCCCCe----EEEEeCCc
Q 015894 233 LSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGT---PG---TVIPMLEAVLDAVPVDK----LAVHFHDT 302 (398)
Q Consensus 233 l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~---P~---~v~~lv~~l~~~~p~~~----l~~H~Hnd 302 (398)
++.+.|.|.. ..+.+.-..-++.+.+.||+.|-+.=-.|.+. -. .+.+-+..+++..++.+ |+.-.=+|
T Consensus 92 v~tVigFP~G-~~~~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L~d 170 (281)
T 2a4a_A 92 IACVINFPYG-TDSMEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGELKT 170 (281)
T ss_dssp EEEEESTTTC-CSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHHCS
T ss_pred EEEEeCCCCC-CCCHHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccCCc
Confidence 3344556754 34555444557788889999998887777443 45 67788888887665432 22222244
Q ss_pred cchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q 015894 303 YGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLN 351 (398)
Q Consensus 303 ~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~ 351 (398)
...=...+..|+++|||+|=+|-+ . .+|++.+|++..+.+
T Consensus 171 ~e~i~~A~~ia~eaGADfVKTSTG-f--------~~~gAT~edv~lm~~ 210 (281)
T 2a4a_A 171 EDLIIKTTLAVLNGNADFIKTSTG-K--------VQINATPSSVEYIIK 210 (281)
T ss_dssp HHHHHHHHHHHHTTTCSEEECCCS-C--------SSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCC-C--------CCCCCCHHHHHHHHH
Confidence 443345677889999999999862 2 346788888776664
No 146
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=93.03 E-value=1.3 Score=40.39 Aligned_cols=173 Identities=16% Similarity=0.126 Sum_probs=93.0
Q ss_pred HHHHHHHHHHhcCCCEEEEe----cCCCCCcccCCCCHHHHHHHHHhccCCcEEE--EeCCHhhHHHHHHcCCCEEEEec
Q 015894 120 VKVELIKLLVSSGLAVVEAT----SFVSPKWVPQLADAKDVMAAIQNVEGARFPV--LTPNLKGFEAAVAAGAKEVAIFA 193 (398)
Q Consensus 120 ~k~~ia~~L~~aGv~~IEvG----~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~--l~~n~~~ie~a~~~Gv~~v~i~~ 193 (398)
+-.++++.+.+.|++.|.+- .+.. .. .. +.++.+++..+..+.+ .+++.++++.++++|++.|.+-.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~-----~~-~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~ 104 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGR-----GS-NH-ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGT 104 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTS-----CC-CH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccC-----CC-hH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEECc
Confidence 45788999999999999983 3321 11 22 4555555434554443 23677889999999999998743
Q ss_pred cCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeee---cCCCC--CC--CCHHHHHHHHHHHHhCCCCEEE
Q 015894 194 SASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVV---GCPVE--GM--VPPSKVAYVSKQLYDMGCSEIS 266 (398)
Q Consensus 194 ~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~f---g~~~~--~r--~~~~~l~~~a~~l~~~Gad~I~ 266 (398)
. .+.+...+.+..++.|..+...+..-. +.... +. .+. ...+.++.+.++|++.|.
T Consensus 105 ~----------------~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~-~~~e~~~~~~~~G~~~i~ 167 (244)
T 2y88_A 105 A----------------ALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGG-DLWDVLERLDSEGCSRFV 167 (244)
T ss_dssp H----------------HHHCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEE-EHHHHHHHHHHTTCCCEE
T ss_pred h----------------HhhChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCC-CHHHHHHHHHhCCCCEEE
Confidence 2 112111223333444433322222110 00000 00 011 345667778889999887
Q ss_pred EccCc--CcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHH-HHHHHHHHh---CCCEEe
Q 015894 267 LGDTI--GVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQAL-SNILASLQM---GISTVD 322 (398)
Q Consensus 267 L~DT~--G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~-ANalaAl~a---Ga~~VD 322 (398)
+-+.. |...+. -.++++.+++.. .+|+..= -|... .++..++++ ||+.|-
T Consensus 168 ~~~~~~~~~~~g~-~~~~~~~l~~~~-~ipvia~----GGI~~~~d~~~~~~~~~~Gad~v~ 223 (244)
T 2y88_A 168 VTDITKDGTLGGP-NLDLLAGVADRT-DAPVIAS----GGVSSLDDLRAIATLTHRGVEGAI 223 (244)
T ss_dssp EEETTTTTTTSCC-CHHHHHHHHTTC-SSCEEEE----SCCCSHHHHHHHHTTGGGTEEEEE
T ss_pred EEecCCccccCCC-CHHHHHHHHHhC-CCCEEEE----CCCCCHHHHHHHHhhccCCCCEEE
Confidence 75522 222222 234566666543 2344442 34443 677777777 876543
No 147
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=93.00 E-value=0.42 Score=46.30 Aligned_cols=175 Identities=11% Similarity=0.050 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccC-CcEEEEeC---------C----H-hhHHHHH
Q 015894 118 AVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEG-ARFPVLTP---------N----L-KGFEAAV 182 (398)
Q Consensus 118 ~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~-~~l~~l~~---------n----~-~~ie~a~ 182 (398)
.+...++...+.+-|++.+-..-.. .++ +.++-.+.+ +.+..+.+ + . -++|.++
T Consensus 70 ~~~l~~~~~~~~~~Gvdavl~~~gi----------~~d-~~Li~~L~~~tv~gs~~~ggl~g~~~~~d~~~~~~sVe~Av 138 (307)
T 3fok_A 70 YELLERMAIALSRPGVDGVLGTPDI----------IDD-LAALGLLDDKIVVGSMNRGGLRGASFEMDDRYTGYNVSSMV 138 (307)
T ss_dssp HHHHHHHHHHHHSTTCCEEEECHHH----------HHH-HHHTTCCTTCEEEEECCCCSCTTCTTTTSCCCCSCCHHHHH
T ss_pred HHHHHHHHHHHhccCCCEEEECcch----------hhc-ccceEEecCcccccccCccccccCCCCccccccccCHHHHH
Confidence 4455667788899999998875321 122 223333333 22333443 1 1 1689999
Q ss_pred HcCCCEEEEeccC---chHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEE-Eeeee-cCCCCCCCCHHHHHHHHHHH
Q 015894 183 AAGAKEVAIFASA---SESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGY-LSCVV-GCPVEGMVPPSKVAYVSKQL 257 (398)
Q Consensus 183 ~~Gv~~v~i~~~~---Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~-l~~~f-g~~~~~r~~~~~l~~~a~~l 257 (398)
+.|+|-+.+.+.+ |+ ...+.++.+.++++.|.++|+.+.+. +.+-. |.......+++.+...++.+
T Consensus 139 rlGADaV~~l~~i~~Gs~---------~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiA 209 (307)
T 3fok_A 139 DRGVDFAKTLVRINLSDA---------GTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIA 209 (307)
T ss_dssp HHTCCEEEEEEEECTTCT---------THHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHH
T ss_pred HCCCCEEEEEEEECCCCh---------hHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHH
Confidence 9999986633221 22 13478999999999999999998643 12111 22112347899999999999
Q ss_pred HhCCCC----EEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEe---CCccchHHHHHHHHHH-hCCCEEee
Q 015894 258 YDMGCS----EISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHF---HDTYGQALSNILASLQ-MGISTVDS 323 (398)
Q Consensus 258 ~~~Gad----~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~---Hnd~GlA~ANalaAl~-aGa~~VD~ 323 (398)
.++|+| +|-+.=| +. ++.+.+..| +|+-+=+ =+|.--.+...-.|++ +|+..+..
T Consensus 210 aELGADs~~tivK~~y~------e~----f~~Vv~a~~-vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~v 272 (307)
T 3fok_A 210 AGLGNDSSYTWMKLPVV------EE----MERVMESTT-MPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTV 272 (307)
T ss_dssp HTCSSCCSSEEEEEECC------TT----HHHHGGGCS-SCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEE
T ss_pred HHhCCCcCCCEEEeCCc------HH----HHHHHHhCC-CCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEee
Confidence 999999 8776433 23 344544444 3454433 2255677888888999 79886653
No 148
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=92.86 E-value=2.1 Score=41.91 Aligned_cols=147 Identities=14% Similarity=0.110 Sum_probs=83.3
Q ss_pred EEEeCCHhhH----HHHHHcCCCEEEEecc--CchHHHhhhcCCCHHHHHHHHHHHHHHHHh-CCCcEEEEEeeeecCCC
Q 015894 169 PVLTPNLKGF----EAAVAAGAKEVAIFAS--ASESFSKSNINCTIEDSLIRYRDVALAARE-LSIPVRGYLSCVVGCPV 241 (398)
Q Consensus 169 ~~l~~n~~~i----e~a~~~Gv~~v~i~~~--~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~-~G~~v~~~l~~~fg~~~ 241 (398)
+.+.++.+++ +.+.+.|+|.|.|-.+ .+. ..+..+|.+...-.+.+.++++..++ .++.|.+-+-. |..
T Consensus 63 QL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~-~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~--g~~- 138 (350)
T 3b0p_A 63 QLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEK-AQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRL--GLE- 138 (350)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHH-HHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEES--CBT-
T ss_pred EeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCc-CcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEec--CcC-
Confidence 3344554443 4556789998887543 222 22333444433334555566666655 47777643332 211
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEccCcC--cCCHH-------HHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHH
Q 015894 242 EGMVPPSKVAYVSKQLYDMGCSEISLGDTIG--VGTPG-------TVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILA 312 (398)
Q Consensus 242 ~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G--~~~P~-------~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANala 312 (398)
...+.+...++++.+.++|++.|.+-+-.. ..+|. .-.+++..+++.+|.+||..=+=-.. ...+..
T Consensus 139 -~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s---~eda~~ 214 (350)
T 3b0p_A 139 -GKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRS---LEEALF 214 (350)
T ss_dssp -TCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCS---HHHHHH
T ss_pred -ccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCC---HHHHHH
Confidence 123456788999999999999998865321 11221 13577888998887677766543211 233344
Q ss_pred HHHhCCCEEeec
Q 015894 313 SLQMGISTVDSS 324 (398)
Q Consensus 313 Al~aGa~~VD~S 324 (398)
+++ ||+.|-..
T Consensus 215 ~l~-GaD~V~iG 225 (350)
T 3b0p_A 215 HLK-RVDGVMLG 225 (350)
T ss_dssp HHT-TSSEEEEC
T ss_pred HHh-CCCEEEEC
Confidence 444 88866543
No 149
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=92.86 E-value=0.95 Score=44.67 Aligned_cols=197 Identities=14% Similarity=0.074 Sum_probs=114.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCccc--CCCC----HHHHHHHHHhc-c--CCcEEEEeC-C-H--------
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVP--QLAD----AKDVMAAIQNV-E--GARFPVLTP-N-L-------- 175 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p--~~~D----~~~v~~~i~~~-~--~~~l~~l~~-n-~-------- 175 (398)
....+....++++-.+.+-+.|=-.+...-++.. .+.+ ...+...++.+ . ++.+....- . .
T Consensus 28 v~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~~g~~~~~~v~g~~~~a~~v~~~A~~~~VPVaLHlDHg~~~~ld~~~~ 107 (349)
T 3elf_A 28 CTSSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKDMVTGAVALAEFTHVIAAKYPVNVALHTDHCPKDKLDSYVR 107 (349)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHTTSSSCEEEEECCCCGGGGGGTHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhcCcchhhhhhhhHHHHHHHHHHHHHHCCCCEEEECCCCCCcccchhhh
Confidence 4677888889999999999976554321101100 0111 12222233321 2 344433331 1 1
Q ss_pred -------hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC------
Q 015894 176 -------KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE------ 242 (398)
Q Consensus 176 -------~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~------ 242 (398)
+.++.++++|...|.+=. |. .+.+|+++..++++++|++.|+.|++.|-..-|.++.
T Consensus 108 ~~l~~~~~~i~~~i~~GFtSVMiDg--S~--------lp~eENi~~Tk~vv~~ah~~gvsVEaElG~iGG~Edgv~~~~~ 177 (349)
T 3elf_A 108 PLLAISAQRVSKGGNPLFQSHMWDG--SA--------VPIDENLAIAQELLKAAAAAKIILEIEIGVVGGEEDGVANEIN 177 (349)
T ss_dssp HHHHHHHHHHHTTCCCSCSEEEECC--TT--------SCHHHHHHHHHHHHHHHHHTTCEEEEEESCCBC----------
T ss_pred hhHHHHHHHHHHHhhcCCCEEEecC--CC--------CCHHHHHHHHHHHHHHHHHcCCeEEEEeeccccccCCcccccc
Confidence 112233344677776622 22 2578999999999999999999999888765554432
Q ss_pred --CCCCHHHHHHHHHHHH--hCCCCEEEEc--cCcCcC-------CHHHHHHHHHHHHhhC--C----CCeEEEEeCCcc
Q 015894 243 --GMVPPSKVAYVSKQLY--DMGCSEISLG--DTIGVG-------TPGTVIPMLEAVLDAV--P----VDKLAVHFHDTY 303 (398)
Q Consensus 243 --~r~~~~~l~~~a~~l~--~~Gad~I~L~--DT~G~~-------~P~~v~~lv~~l~~~~--p----~~~l~~H~Hnd~ 303 (398)
-.++|+...+++++.- .-|+|.+.++ -.=|.- .|..+.++=+.+.+.+ | ++||.+|+= -
T Consensus 178 ~~~yT~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~~~~~vpLVlHGg--S 255 (349)
T 3elf_A 178 EKLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGG--S 255 (349)
T ss_dssp ---CCCHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHHHTCCTTCCCCCEEECCC--T
T ss_pred cccCCCHHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhhcCCccccCCCcEEEeCC--C
Confidence 2478999888876553 2247765442 222332 3445555545554333 2 467887765 4
Q ss_pred chHHHHHHHHHHhCCCEEee
Q 015894 304 GQALSNILASLQMGISTVDS 323 (398)
Q Consensus 304 GlA~ANalaAl~aGa~~VD~ 323 (398)
|........|++.|+.-|+.
T Consensus 256 G~p~e~i~~ai~~GV~KiNi 275 (349)
T 3elf_A 256 GSLKSEIEEALRYGVVKMNV 275 (349)
T ss_dssp TCCHHHHHHHHHTTEEEEEE
T ss_pred CCCHHHHHHHHHcCCEEEEc
Confidence 88889999999999876644
No 150
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=92.80 E-value=3.7 Score=38.71 Aligned_cols=120 Identities=11% Similarity=0.055 Sum_probs=69.1
Q ss_pred ccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCC--CC---CcccC---CCCHHHHHHHHHhccCCcE
Q 015894 97 FVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFV--SP---KWVPQ---LADAKDVMAAIQNVEGARF 168 (398)
Q Consensus 97 ~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~--~~---~~~p~---~~D~~~v~~~i~~~~~~~l 168 (398)
++-+.=-|+||-... .-.+.++.+.++|++.||+.... .. .+.|. ..+.+++.+.+++ .++++
T Consensus 22 ~~g~~~~s~~~~~~~--------~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~-~GL~i 92 (305)
T 3obe_A 22 KMGLQTYSLGQELLQ--------DMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDD-AGLRI 92 (305)
T ss_dssp CCEEEGGGGTHHHHT--------THHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHH-TTCEE
T ss_pred ceEEEEEEchhhhhc--------CHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHH-CCCeE
Confidence 455666677764221 23568888999999999998531 00 11111 1256666666653 35555
Q ss_pred EEEe-C---C----------H----hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 015894 169 PVLT-P---N----------L----KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVR 230 (398)
Q Consensus 169 ~~l~-~---n----------~----~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~ 230 (398)
.++. . + . +.++.|.+.|++.|.+. +..+.. ..-..+...+.+.++.++|+++|+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~-~~~~~~----~~~~~~~~~~~l~~l~~~a~~~Gv~l~ 167 (305)
T 3obe_A 93 SSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQP-SLPRIE----NEDDAKVVSEIFNRAGEITKKAGILWG 167 (305)
T ss_dssp EEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEEC-CCCCCS----SHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred EEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeC-CCCCCC----CHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 4432 1 1 1 12456777899999874 221100 000234556777888999999998765
No 151
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=92.75 E-value=1.9 Score=40.81 Aligned_cols=108 Identities=23% Similarity=0.257 Sum_probs=73.4
Q ss_pred eeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcC---CHHHHHHHHHHHHhhCCCCe----EEEEeCCccchH
Q 015894 234 SCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVG---TPGTVIPMLEAVLDAVPVDK----LAVHFHDTYGQA 306 (398)
Q Consensus 234 ~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~---~P~~v~~lv~~l~~~~p~~~----l~~H~Hnd~GlA 306 (398)
+.+.|.|.. ..+.+.-..-++.+.+.||+.|-+.=-.|.+ .-..+.+-+..+++..++.+ |+.-..++-..
T Consensus 98 ~tVigFP~G-~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei- 175 (260)
T 3r12_A 98 VTVVGFPLG-ANETRTKAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEK- 175 (260)
T ss_dssp EEEESTTTC-CSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHH-
T ss_pred EEEecCCCC-CCcHHHHHHHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHH-
Confidence 344566754 4455544555777888999999888777774 55778888888887754322 33344455444
Q ss_pred HHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q 015894 307 LSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNG 352 (398)
Q Consensus 307 ~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~ 352 (398)
...+..|.++||++|=+| .|.+ +|++.+|++-.+.+.
T Consensus 176 ~~A~~ia~eaGADfVKTS-TGf~--------~~GAT~edV~lm~~~ 212 (260)
T 3r12_A 176 IAACVISKLAGAHFVKTS-TGFG--------TGGATAEDVHLMKWI 212 (260)
T ss_dssp HHHHHHHHHTTCSEEECC-CSSS--------SCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCEEEcC-CCCC--------CCCCCHHHHHHHHHH
Confidence 344677889999999999 5553 457888888777663
No 152
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=92.64 E-value=1.1 Score=44.50 Aligned_cols=140 Identities=16% Similarity=0.048 Sum_probs=83.6
Q ss_pred HHHHHcCCCEEEEeccC--------chH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEeee-ecCCCCCCC
Q 015894 179 EAAVAAGAKEVAIFASA--------SES--FSKSNINCTIEDSLIRYRDVALAAREL-SI-PVRGYLSCV-VGCPVEGMV 245 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~--------Sd~--~~~~~~~~s~~~~l~~~~~~v~~ak~~-G~-~v~~~l~~~-fg~~~~~r~ 245 (398)
++|.++|.|.|.|-..- |+. +....+|-+.++-.+.+.++++.+|+. |. .|.+-++.. +........
T Consensus 173 ~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~ 252 (377)
T 2r14_A 173 QRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDE 252 (377)
T ss_dssp HHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSC
T ss_pred HHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCC
Confidence 35578999999885431 222 223345667777777778888887764 43 555545421 000001234
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEccCc-CcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhC-CCEEee
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGDTI-GVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMG-ISTVDS 323 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~DT~-G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aG-a~~VD~ 323 (398)
+.+...++++.+.++|++.|.+..-. ....|..-.++++.+++.++. ||..=+- . -...+..+++.| ||.|-.
T Consensus 253 ~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~i-Pvi~~Gg--i--~~~~a~~~l~~g~aD~V~i 327 (377)
T 2r14_A 253 PEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKG-GLIYCGN--Y--DAGRAQARLDDNTADAVAF 327 (377)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCS-EEEEESS--C--CHHHHHHHHHTTSCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCC-CEEEECC--C--CHHHHHHHHHCCCceEEee
Confidence 67888999999999999998885411 000110013567778887753 4444322 2 267788888888 887643
No 153
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=92.44 E-value=0.94 Score=42.89 Aligned_cols=89 Identities=13% Similarity=0.158 Sum_probs=61.5
Q ss_pred CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHh-CCCCEEEE--c--------cCcCcCCHHHHHHHHHHHHhhCCCCe
Q 015894 226 SIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYD-MGCSEISL--G--------DTIGVGTPGTVIPMLEAVLDAVPVDK 294 (398)
Q Consensus 226 G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~-~Gad~I~L--~--------DT~G~~~P~~v~~lv~~l~~~~p~~~ 294 (398)
+..+.+++.. .+++.+.+.++.+.+ .|+|.|.| . |..|. .|..+.++++.+++... .+
T Consensus 98 ~~p~~v~l~~---------~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~-~~~~~~eii~~v~~~~~-~p 166 (311)
T 1ep3_A 98 ELPIIANVAG---------SEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGT-DPEVAAALVKACKAVSK-VP 166 (311)
T ss_dssp TSCEEEEECC---------SSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGG-CHHHHHHHHHHHHHHCS-SC
T ss_pred CCcEEEEEcC---------CCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcC-CHHHHHHHHHHHHHhcC-CC
Confidence 5666655541 257888999988888 89997755 1 33332 68889999999998863 56
Q ss_pred EEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 295 LAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 295 l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
|.+..--+..-...-+..+.++|++.|+++=
T Consensus 167 v~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~ 197 (311)
T 1ep3_A 167 LYVKLSPNVTDIVPIAKAVEAAGADGLTMIN 197 (311)
T ss_dssp EEEEECSCSSCSHHHHHHHHHTTCSEEEECC
T ss_pred EEEEECCChHHHHHHHHHHHHcCCCEEEEeC
Confidence 7776653332223335667789999999854
No 154
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=92.44 E-value=1.5 Score=43.16 Aligned_cols=138 Identities=15% Similarity=0.105 Sum_probs=85.8
Q ss_pred HHHHHcCCCEEEEecc--------CchH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-C--CcEEEEEeeeecCCCCCCC
Q 015894 179 EAAVAAGAKEVAIFAS--------ASES--FSKSNINCTIEDSLIRYRDVALAAREL-S--IPVRGYLSCVVGCPVEGMV 245 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~--------~Sd~--~~~~~~~~s~~~~l~~~~~~v~~ak~~-G--~~v~~~l~~~fg~~~~~r~ 245 (398)
++|.++|.|.|.|-.. .|+. +....+|-+.++-.+.+.++++.+|+. | +.|.+-++..-..+ .+..
T Consensus 165 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~-~G~~ 243 (363)
T 3l5l_A 165 RRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDG-RDEQ 243 (363)
T ss_dssp HHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSS-CHHH
T ss_pred HHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCC-CCCC
Confidence 4567899999888653 1222 223345667777777888899988876 4 44655555321011 1114
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEccC--cCc----CCHHHHHHHHHHHHhhCCCCeEEEEeCCccch-HHHHHHHHHHhC-
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGDT--IGV----GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQ-ALSNILASLQMG- 317 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~DT--~G~----~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~Gl-A~ANalaAl~aG- 317 (398)
+.+...++++.+.++|+|.|.+... ... ..|..-.++++.+++.+. +||..=+ |. ....+..+++.|
T Consensus 244 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~G----gI~s~e~a~~~l~~G~ 318 (363)
T 3l5l_A 244 TLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAK-LPVTSAW----GFGTPQLAEAALQANQ 318 (363)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT-CCEEECS----STTSHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcC-CcEEEeC----CCCCHHHHHHHHHCCC
Confidence 5788899999999999999888752 111 123334567778887764 3444322 22 246677889999
Q ss_pred CCEEe
Q 015894 318 ISTVD 322 (398)
Q Consensus 318 a~~VD 322 (398)
||.|-
T Consensus 319 aD~V~ 323 (363)
T 3l5l_A 319 LDLVS 323 (363)
T ss_dssp CSEEE
T ss_pred ccEEE
Confidence 78653
No 155
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=92.44 E-value=7.5 Score=36.83 Aligned_cols=186 Identities=11% Similarity=0.100 Sum_probs=103.2
Q ss_pred HHHHHHHhcCCCEEEEecCCC-C-------Cccc-----------CCCCHHHHHHHHHhc---cCCcEEE-E-eCCHhhH
Q 015894 123 ELIKLLVSSGLAVVEATSFVS-P-------KWVP-----------QLADAKDVMAAIQNV---EGARFPV-L-TPNLKGF 178 (398)
Q Consensus 123 ~ia~~L~~aGv~~IEvG~~~~-~-------~~~p-----------~~~D~~~v~~~i~~~---~~~~l~~-l-~~n~~~i 178 (398)
+..+.+.+.|+-.+++++... + ++.+ +....+.+++.++.. ++..+.+ + ..+.+++
T Consensus 29 ~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~p~~~~i~g~~~~~~ 108 (314)
T 2e6f_A 29 EDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHDYSKKPLFLSISGLSVEEN 108 (314)
T ss_dssp HHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCCTTTCCEEEEECCSSHHHH
T ss_pred HHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhhcCCCcEEEEeCCCCHHHH
Confidence 445678999999999875321 1 1000 011244444555532 2344332 2 2344443
Q ss_pred ----HHHHHcCCC---EEEEeccCchHH-HhhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEeeeecCCCCCCCCHHH
Q 015894 179 ----EAAVAAGAK---EVAIFASASESF-SKSNINCTIEDSLIRYRDVALAAREL-SIPVRGYLSCVVGCPVEGMVPPSK 249 (398)
Q Consensus 179 ----e~a~~~Gv~---~v~i~~~~Sd~~-~~~~~~~s~~~~l~~~~~~v~~ak~~-G~~v~~~l~~~fg~~~~~r~~~~~ 249 (398)
+++.+.|+| .|.+-++ ++.. ....++.+.+. +.++++.+|+. +++|.+-+. ++ .+.+.
T Consensus 109 ~~~a~~~~~~g~d~~~~iein~~-~P~~~g~~~~g~~~~~----~~~ii~~vr~~~~~Pv~vK~~-----~~---~~~~~ 175 (314)
T 2e6f_A 109 VAMVRRLAPVAQEKGVLLELNLS-CPNVPGKPQVAYDFEA----MRTYLQQVSLAYGLPFGVKMP-----PY---FDIAH 175 (314)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECC-CCCSTTCCCGGGSHHH----HHHHHHHHHHHHCSCEEEEEC-----CC---CCHHH
T ss_pred HHHHHHHHHhCCCcCceEEEEcC-CCCCCCchhhcCCHHH----HHHHHHHHHHhcCCCEEEEEC-----CC---CCHHH
Confidence 455567888 7777443 1211 11123334443 34445555443 666654332 22 36788
Q ss_pred HHHHHHHHHhCC-CCEEEEccCcCc----------------------CCH---HHHHHHHHHHHhhCCCCeEEEEeCCcc
Q 015894 250 VAYVSKQLYDMG-CSEISLGDTIGV----------------------GTP---GTVIPMLEAVLDAVPVDKLAVHFHDTY 303 (398)
Q Consensus 250 l~~~a~~l~~~G-ad~I~L~DT~G~----------------------~~P---~~v~~lv~~l~~~~p~~~l~~H~Hnd~ 303 (398)
+.++++.+.++| +|.|.+.++.|. ..| ....++++.+++.+|.+||-.=+--..
T Consensus 176 ~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~ 255 (314)
T 2e6f_A 176 FDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVYS 255 (314)
T ss_dssp HHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCS
T ss_pred HHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 889999999999 999998886631 111 123477888888776666655443222
Q ss_pred chHHHHHHHHHHhCCCEEeec
Q 015894 304 GQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 304 GlA~ANalaAl~aGa~~VD~S 324 (398)
...+.+++.+||+.|-..
T Consensus 256 ---~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 256 ---GEDAFLHILAGASMVQVG 273 (314)
T ss_dssp ---HHHHHHHHHHTCSSEEEC
T ss_pred ---HHHHHHHHHcCCCEEEEc
Confidence 245666678899877543
No 156
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=92.29 E-value=3.5 Score=39.48 Aligned_cols=175 Identities=13% Similarity=0.068 Sum_probs=97.9
Q ss_pred HHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeCC---------------HhhHHHHHHcCCCE
Q 015894 124 LIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPN---------------LKGFEAAVAAGAKE 188 (398)
Q Consensus 124 ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~n---------------~~~ie~a~~~Gv~~ 188 (398)
=+....+.|.+.||+=.-.. ++.+.....+++.+++..++.+-+|+|. ..+++.+.++|++.
T Consensus 51 ~a~~A~~gGAdRIELc~~l~---~GGlTPS~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdG 127 (287)
T 3iwp_A 51 SAVNAERGGADRIELCSGLS---EGGTTPSMGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADG 127 (287)
T ss_dssp HHHHHHHHTCSEEEECBCGG---GTCBCCCHHHHHHHHTTCCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHhCCCEEEECCCCC---CCCCCCCHHHHHHHHHhcCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Confidence 34556889999999953211 1112222356666665556777777752 13678899999999
Q ss_pred EEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 015894 189 VAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLG 268 (398)
Q Consensus 189 v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~ 268 (398)
|.+-+-..|-. .+ +++++++++.++. +.+. +-.+| |.. .++ .+..+.+.++|+++|--.
T Consensus 128 vVfG~L~~dg~------iD----~~~~~~Li~~a~~--l~vT--FHRAF---D~~-~d~---~~Ale~Li~lGvdrILTS 186 (287)
T 3iwp_A 128 LVFGALTEDGH------ID----KELCMSLMAICRP--LPVT--FHRAF---DMV-HDP---MAALETLLTLGFERVLTS 186 (287)
T ss_dssp EEECCBCTTSC------BC----HHHHHHHHHHHTT--SCEE--ECGGG---GGC-SCH---HHHHHHHHHHTCSEEEEC
T ss_pred EEEeeeCCCCC------cC----HHHHHHHHHHcCC--CcEE--EECch---hcc-CCH---HHHHHHHHHcCCCEEECC
Confidence 98864322311 11 3456667777654 4443 33444 221 233 345667778899998763
Q ss_pred cCcCcCCHHHHHHHHHHHHhhC-CCCeEEEEeCCccchHHHHHHHHHH-hCCCEEeeccccC
Q 015894 269 DTIGVGTPGTVIPMLEAVLDAV-PVDKLAVHFHDTYGQALSNILASLQ-MGISTVDSSVSGL 328 (398)
Q Consensus 269 DT~G~~~P~~v~~lv~~l~~~~-p~~~l~~H~Hnd~GlA~ANalaAl~-aGa~~VD~Sv~Gl 328 (398)
=. .-+..+=.+.++.+.+.. ..++|-. .-|.-..|+-.-++ +|++.++.|....
T Consensus 187 G~--~~~a~~Gl~~Lk~Lv~~a~~rI~Ima----GGGV~~~Ni~~l~~~tG~~~~H~S~~~~ 242 (287)
T 3iwp_A 187 GC--DSSALEGLPLIKRLIEQAKGRIVVMP----GGGITDRNLQRILEGSGATEFHCSARST 242 (287)
T ss_dssp TT--SSSTTTTHHHHHHHHHHHTTSSEEEE----CTTCCTTTHHHHHHHHCCSEEEECCEEE
T ss_pred CC--CCChHHhHHHHHHHHHHhCCCCEEEE----CCCcCHHHHHHHHHhhCCCEEeECcCcc
Confidence 22 111122223334443333 2233333 23455566666565 9999999997543
No 157
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=92.28 E-value=7 Score=36.11 Aligned_cols=95 Identities=18% Similarity=0.105 Sum_probs=61.5
Q ss_pred HHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccC-------------------cCcCCH
Q 015894 217 DVALAARELSIP-VRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDT-------------------IGVGTP 276 (398)
Q Consensus 217 ~~v~~ak~~G~~-v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT-------------------~G~~~P 276 (398)
+..+.+|+.|.. +.+|+.. +..+.+...+.++.+.+.|+|.|-|... .+.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~i~~-------g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~ 79 (262)
T 1rd5_A 7 DTMAALMAKGKTAFIPYITA-------GDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTM 79 (262)
T ss_dssp HHHHHHHHTTCCEEEEEEET-------TSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCH
T ss_pred HHHHHHHhcCCceEEEEeeC-------CCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCH
Confidence 344455555554 4455541 2235688899999999999999888542 233678
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEeCCc----cchHHHHHHHHHHhCCCEEeec
Q 015894 277 GTVIPMLEAVLDAVPVDKLAVHFHDT----YGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 277 ~~v~~lv~~l~~~~p~~~l~~H~Hnd----~GlA~ANalaAl~aGa~~VD~S 324 (398)
....++++.+++.. ++|+.+=...+ +++. .+.++|++.|...
T Consensus 80 ~~~~~~i~~ir~~~-~~Pv~~m~~~~~~~~~~~~-----~a~~aGadgv~v~ 125 (262)
T 1rd5_A 80 DAVLEMLREVTPEL-SCPVVLLSYYKPIMFRSLA-----KMKEAGVHGLIVP 125 (262)
T ss_dssp HHHHHHHHHHGGGC-SSCEEEECCSHHHHSCCTH-----HHHHTTCCEEECT
T ss_pred HHHHHHHHHHHhcC-CCCEEEEecCcHHHHHHHH-----HHHHcCCCEEEEc
Confidence 88899999999873 45654421111 1221 2889999987764
No 158
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=92.26 E-value=0.77 Score=44.13 Aligned_cols=102 Identities=14% Similarity=0.184 Sum_probs=72.4
Q ss_pred HHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCE-EEEc-cCcCc-CCHHHHHHHHHHHHh--hC
Q 015894 216 RDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSE-ISLG-DTIGV-GTPGTVIPMLEAVLD--AV 290 (398)
Q Consensus 216 ~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~-I~L~-DT~G~-~~P~~v~~lv~~l~~--~~ 290 (398)
+++.+.|++.|+-|-+ +. -.+.+.+..+++.+.+.+... |.+. .+..+ .....+..++..+.+ ..
T Consensus 10 ~~ll~~A~~~~yAV~A-fN---------v~n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~ 79 (288)
T 3q94_A 10 KEMLNKALEGKYAVGQ-FN---------MNNLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNI 79 (288)
T ss_dssp HHHHHHHHHHTCCEEE-EE---------CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCcEEEE-Ee---------eCCHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCC
Confidence 5678899999998742 22 146788999999999999875 4444 23333 234556777777766 43
Q ss_pred CCCeEEEEeCCccchHHHHHHHHHHhCCC--EEeeccccCCC
Q 015894 291 PVDKLAVHFHDTYGQALSNILASLQMGIS--TVDSSVSGLGG 330 (398)
Q Consensus 291 p~~~l~~H~Hnd~GlA~ANalaAl~aGa~--~VD~Sv~GlGe 330 (398)
.+|+.+|. |.|.....+..|+++|.+ ++|+|-..+-+
T Consensus 80 -~VPValHl--DHg~~~e~i~~ai~~GFtSVMiDgS~~p~ee 118 (288)
T 3q94_A 80 -TVPVAIHL--DHGSSFEKCKEAIDAGFTSVMIDASHHPFEE 118 (288)
T ss_dssp -CSCEEEEE--EEECSHHHHHHHHHHTCSEEEECCTTSCHHH
T ss_pred -CCcEEEEC--CCCCCHHHHHHHHHcCCCeEEEeCCCCCHHH
Confidence 45777765 566678889999999998 67999876655
No 159
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=92.21 E-value=0.98 Score=43.35 Aligned_cols=117 Identities=14% Similarity=0.109 Sum_probs=83.3
Q ss_pred HHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCC-EEEEccCc-CcCCHHHHHHHHHHHHhhCCCC
Q 015894 216 RDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCS-EISLGDTI-GVGTPGTVIPMLEAVLDAVPVD 293 (398)
Q Consensus 216 ~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad-~I~L~DT~-G~~~P~~v~~lv~~l~~~~p~~ 293 (398)
+++.+.|++.|+-|- .+.. .+.+.+..+++.+.+.+.. +|.+.-.. .++....+..++..+.+.++ +
T Consensus 7 ~~ll~~A~~~~yAv~-AfNv---------~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~-V 75 (286)
T 1gvf_A 7 KYLLQDAQANGYAVP-AFNI---------HNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYN-M 75 (286)
T ss_dssp HHHHHHHHHHTCCEE-EEEC---------CSHHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTT-S
T ss_pred HHHHHHHHHCCCEEE-EEee---------CCHHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCC-C
Confidence 567788999999874 3331 3678888999999998876 45554432 23335667788888877765 5
Q ss_pred eEEEEeCCccchHHHHHHHHHHhCCC--EEeeccccCCCCCCCCCCCCCc-cHHHHHHHHHhCC
Q 015894 294 KLAVHFHDTYGQALSNILASLQMGIS--TVDSSVSGLGGCPYAKGASGNV-ATEDVVYMLNGLG 354 (398)
Q Consensus 294 ~l~~H~Hnd~GlA~ANalaAl~aGa~--~VD~Sv~GlGecp~a~graGNa-~lE~vv~~L~~~G 354 (398)
|+.+|. |.|.....+..|+++|.+ ++|+|-..+-+ |. -|.+++...+..|
T Consensus 76 PValHl--DHg~~~e~i~~ai~~GFtSVMiDgS~lp~ee---------Ni~~Tk~vv~~ah~~g 128 (286)
T 1gvf_A 76 PLALHL--DHHESLDDIRRKVHAGVRSAMIDGSHFPFAE---------NVKLVKSVVDFCHSQD 128 (286)
T ss_dssp CBEEEE--EEECCHHHHHHHHHTTCCEEEECCTTSCHHH---------HHHHHHHHHHHHHHTT
T ss_pred cEEEEc--CCCCCHHHHHHHHHcCCCeEEECCCCCCHHH---------HHHHHHHHHHHHHHcC
Confidence 676665 555668899999999998 67999887766 55 5666777776433
No 160
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=92.10 E-value=0.88 Score=42.00 Aligned_cols=227 Identities=9% Similarity=0.055 Sum_probs=111.9
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcccCC--CCHHHHHHHHHhccCCcEEEEeCC--------H--------hhHHHHHH
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWVPQL--ADAKDVMAAIQNVEGARFPVLTPN--------L--------KGFEAAVA 183 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~p~~--~D~~~v~~~i~~~~~~~l~~l~~n--------~--------~~ie~a~~ 183 (398)
.+.++.+.++|++.||+..+..+ +++.. .+.+++.+.++. .+.++.++.+. . +.++.|.+
T Consensus 18 ~~~l~~~~~~G~~~vEl~~~~~~-~~~~~~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~ 95 (286)
T 3dx5_A 18 TDIVQFAYENGFEGIELWGTHAQ-NLYMQEYETTERELNCLKD-KTLEITMISDYLDISLSADFEKTIEKCEQLAILANW 95 (286)
T ss_dssp HHHHHHHHHTTCCEEEEEHHHHH-HHHHHCHHHHHHHHHHTGG-GTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEcccccc-cccccCHHHHHHHHHHHHH-cCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 35677788899999999643110 01000 112222333322 35666666421 1 13566778
Q ss_pred cCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCC
Q 015894 184 AGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCS 263 (398)
Q Consensus 184 ~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad 263 (398)
.|++.|.++....... ....-..+...+.+.++.++|++.|+.+. +.. .+...-.+++.+.++++.+ +.+
T Consensus 96 lG~~~v~~~~g~~~~~--~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lE~---~~~~~~~~~~~~~~l~~~~---~~~ 165 (286)
T 3dx5_A 96 FKTNKIRTFAGQKGSA--DFSQQERQEYVNRIRMICELFAQHNMYVL--LET---HPNTLTDTLPSTLELLGEV---DHP 165 (286)
T ss_dssp HTCCEEEECSCSSCGG--GSCHHHHHHHHHHHHHHHHHHHHTTCEEE--EEC---CTTSTTSSHHHHHHHHHHH---CCT
T ss_pred hCCCEEEEcCCCCCcc--cCcHHHHHHHHHHHHHHHHHHHHhCCEEE--Eec---CCCcCcCCHHHHHHHHHhc---CCC
Confidence 8999998865432110 00000234566777888899999998764 221 1222224566666666544 333
Q ss_pred EE-EEccCcCcCCH-HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHH---HHH-HhCCCEEeeccccCCCCCCCCCC
Q 015894 264 EI-SLGDTIGVGTP-GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNIL---ASL-QMGISTVDSSVSGLGGCPYAKGA 337 (398)
Q Consensus 264 ~I-~L~DT~G~~~P-~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANal---aAl-~aGa~~VD~Sv~GlGecp~a~gr 337 (398)
.+ ..-|+.=.... .+..+.++.+. + --.++|++|..+-.....+ ... ..|...- -..+ +
T Consensus 166 ~vg~~~D~~h~~~~g~d~~~~l~~~~---~-~i~~vHl~D~~~~~~~~~~~~~~~~~~~g~~~~---~~~~--------G 230 (286)
T 3dx5_A 166 NLKINLDFLHIWESGADPVDSFQQLR---P-WIQHYHFKNISSADYLHVFEPNNVYAAAGNRTG---MVPL--------F 230 (286)
T ss_dssp TEEEEEEHHHHHHTTCCHHHHHHHHG---G-GEEEEEECEESCGGGGGGGSHHHHHSTTCCCTT---EECG--------G
T ss_pred CeEEEeccccHhhcCCCHHHHHHHHH---h-HheEEEecCCcccccccccCccccccccCccee---eecc--------C
Confidence 22 23344221110 12233344433 2 2478999998774210000 000 0111100 0111 3
Q ss_pred CCCccHHHHHHHHHhC-C---CCC-ccC-hHHHHHHHHHHHHHh
Q 015894 338 SGNVATEDVVYMLNGL-G---VRT-NVD-IRKLMIAGDFICKHL 375 (398)
Q Consensus 338 aGNa~lE~vv~~L~~~-G---i~t-~iD-l~~L~~~~~~v~~~~ 375 (398)
.|..+...++..|++. | ++. +-| .+.+.+-.+++.+..
T Consensus 231 ~G~id~~~i~~~L~~~~g~~~lE~~~~d~~~~~~~s~~~Lr~~~ 274 (286)
T 3dx5_A 231 EGIVNYDEIIQEVRDTDHFASLEWFGHNAKDILKAEMKVLTNRN 274 (286)
T ss_dssp GSSSCHHHHHHHHTTSSCEEEECCCSSCHHHHHHHHHHHHHHCC
T ss_pred CCcCCHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHHHHHHHhcC
Confidence 6789999999999873 2 121 112 245555566665544
No 161
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=92.00 E-value=2.7 Score=39.57 Aligned_cols=119 Identities=7% Similarity=-0.049 Sum_probs=71.1
Q ss_pred ccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe-CC-
Q 015894 97 FVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT-PN- 174 (398)
Q Consensus 97 ~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~-~n- 174 (398)
++-+.=-|+||-.+. .+ -.+.++.+.++|++.||+.........+ .+.+++.+.+++ .+.++.++. +.
T Consensus 14 ~~g~~~~s~~~~~~~----~~---~~~~l~~~a~~G~~~VEl~~~~~~~~~~--~~~~~~~~~l~~-~GL~v~~~~~~~~ 83 (303)
T 3l23_A 14 EIGLQIYSLSQELYK----GD---VAANLRKVKDMGYSKLELAGYGKGAIGG--VPMMDFKKMAED-AGLKIISSHVNPV 83 (303)
T ss_dssp CCEEEGGGGGGGGGS----SC---HHHHHHHHHHTTCCEEEECCEETTEETT--EEHHHHHHHHHH-TTCEEEEEECCCB
T ss_pred ceEEEEEEchhhhcc----CC---HHHHHHHHHHcCCCEEEeccccCcccCC--CCHHHHHHHHHH-cCCeEEEEecccc
Confidence 466777788885443 12 2467778889999999997532111111 256666666654 345544332 11
Q ss_pred --------------------H-------hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC
Q 015894 175 --------------------L-------KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSI 227 (398)
Q Consensus 175 --------------------~-------~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~ 227 (398)
. +-++.|.+.|++.|.+... ... ...-..+...+.+.++.++|++.|+
T Consensus 84 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~-~~~----~~~~~~~~~~~~l~~l~~~a~~~Gv 158 (303)
T 3l23_A 84 DTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPMM-PTI----TTHDEAKLVCDIFNQASDVIKAEGI 158 (303)
T ss_dssp CTTCSSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSEEEECSC-CCC----CSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccCcccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEECCC-CCC----CCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 1 1245677789999987422 110 0001234566778888999999999
Q ss_pred c--EE
Q 015894 228 P--VR 230 (398)
Q Consensus 228 ~--v~ 230 (398)
. +.
T Consensus 159 ~~~l~ 163 (303)
T 3l23_A 159 ATGFG 163 (303)
T ss_dssp TTCEE
T ss_pred cceEE
Confidence 8 75
No 162
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=92.00 E-value=2.4 Score=40.34 Aligned_cols=145 Identities=14% Similarity=0.152 Sum_probs=93.0
Q ss_pred EEEEe-CCHhhHHHHHHcCCCEEEEe-ccCchHHHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC
Q 015894 168 FPVLT-PNLKGFEAAVAAGAKEVAIF-ASASESFSKSN-INCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGM 244 (398)
Q Consensus 168 l~~l~-~n~~~ie~a~~~Gv~~v~i~-~~~Sd~~~~~~-~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r 244 (398)
+.++. .+.-....+.++|++.|.+. .+++-.+-..- ...|.++.+..++.+.+.+ .+.|.+.+ |..+-
T Consensus 18 i~~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~---~~pviaD~------d~Gyg 88 (275)
T 2ze3_A 18 FLLPNAWDVASARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAV---AIPVNADI------EAGYG 88 (275)
T ss_dssp EEECEESSHHHHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHC---SSCEEEEC------TTCSS
T ss_pred eeEecccCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhc---CCCEEeec------CCCCC
Confidence 44443 34444455667899998886 34442211111 1357888888887766654 35554322 33322
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcC-----cCCHHHHHHHHHHHHhhCC--CCeEEEEeCCc-------------cc
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTIG-----VGTPGTVIPMLEAVLDAVP--VDKLAVHFHDT-------------YG 304 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~G-----~~~P~~v~~lv~~l~~~~p--~~~l~~H~Hnd-------------~G 304 (398)
.+++.+.+.++++.+.|+..|.|-|..+ +..++++.+.|+++++.-. ++++-+-.-.| .-
T Consensus 89 ~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~ 168 (275)
T 2ze3_A 89 HAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLA 168 (275)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHH
Confidence 3688999999999999999999999974 4556778888888887621 12343433333 23
Q ss_pred hHHHHHHHHHHhCCCEE
Q 015894 305 QALSNILASLQMGISTV 321 (398)
Q Consensus 305 lA~ANalaAl~aGa~~V 321 (398)
-++.-+.+-.+|||+.|
T Consensus 169 ~ai~Ra~ay~eAGAd~i 185 (275)
T 2ze3_A 169 ETVRRGQAYADAGADGI 185 (275)
T ss_dssp HHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHCCCCEE
Confidence 46777778889999965
No 163
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.97 E-value=2.2 Score=40.35 Aligned_cols=109 Identities=15% Similarity=0.188 Sum_probs=69.9
Q ss_pred HHHHHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc--------c------Cc-----Cc
Q 015894 214 RYRDVALAARELSIP-VRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLG--------D------TI-----GV 273 (398)
Q Consensus 214 ~~~~~v~~ak~~G~~-v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~--------D------T~-----G~ 273 (398)
++.+..+.+|+.|-. +.+|++ .+..+++...++++.+.+.|+|.|-|. | .. ..
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~-------aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G 76 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVT-------IGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAG 76 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEE-------TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCeEEEEEe-------CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcC
Confidence 344555666665554 455665 233467999999999999999976655 1 11 23
Q ss_pred CCHHHHHHHHHHHHhhCCCCeEEEEeCCcc--chHHHH-HHHHHHhCCCEEeeccccCC
Q 015894 274 GTPGTVIPMLEAVLDAVPVDKLAVHFHDTY--GQALSN-ILASLQMGISTVDSSVSGLG 329 (398)
Q Consensus 274 ~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~--GlA~AN-alaAl~aGa~~VD~Sv~GlG 329 (398)
.+...+-++++.+|+..+.+|+.+-+.-|. ..++.+ +-.+.++|++.+=..-..+.
T Consensus 77 ~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~e 135 (267)
T 3vnd_A 77 TTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVE 135 (267)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGG
T ss_pred CCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHh
Confidence 455577889999998766667777666332 223333 45566899998766544443
No 164
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=91.89 E-value=6 Score=37.95 Aligned_cols=147 Identities=16% Similarity=0.196 Sum_probs=92.4
Q ss_pred CcEEEEe-CCHhhHHHHHHcCCCEEEEecc-Cch-HHHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC
Q 015894 166 ARFPVLT-PNLKGFEAAVAAGAKEVAIFAS-ASE-SFSKSN-INCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV 241 (398)
Q Consensus 166 ~~l~~l~-~n~~~ie~a~~~Gv~~v~i~~~-~Sd-~~~~~~-~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~ 241 (398)
-.+.++. .+.-....+.++|++.|.+..+ ++- .+-..- ...|.++.+..++.+.+.+ ...|.+. .|.
T Consensus 17 ~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~---~~PviaD------~d~ 87 (295)
T 1xg4_A 17 NPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVC---SLPLLVD------ADI 87 (295)
T ss_dssp SSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHC---CSCEEEE------CTT
T ss_pred CcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhC---CCCEEec------CCc
Confidence 3455554 3555556667799999888544 221 111111 2347888888887766643 3455422 222
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEccCcC-----------cCCHHHHHHHHHHHHhhCCCCeEEEEeCCc------cc
Q 015894 242 EGMVPPSKVAYVSKQLYDMGCSEISLGDTIG-----------VGTPGTVIPMLEAVLDAVPVDKLAVHFHDT------YG 304 (398)
Q Consensus 242 ~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd------~G 304 (398)
.+-.+++.+.+.++++.+.|+..|.|-|..+ +....+..+.|+++++...+.++-+-.-.| +-
T Consensus 88 Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~ 167 (295)
T 1xg4_A 88 GFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLD 167 (295)
T ss_dssp CSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHH
T ss_pred ccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHH
Confidence 2223788999999999999999999999974 333455667777777664222233333333 23
Q ss_pred hHHHHHHHHHHhCCCEE
Q 015894 305 QALSNILASLQMGISTV 321 (398)
Q Consensus 305 lA~ANalaAl~aGa~~V 321 (398)
-++.-+.+..+|||+.|
T Consensus 168 ~ai~ra~ay~eAGAd~i 184 (295)
T 1xg4_A 168 AAIERAQAYVEAGAEML 184 (295)
T ss_dssp HHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHcCCCEE
Confidence 57888899999999965
No 165
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=91.81 E-value=5.9 Score=38.72 Aligned_cols=134 Identities=9% Similarity=0.019 Sum_probs=82.4
Q ss_pred hHHHHHHcCCCEEEEecc--CchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHH------
Q 015894 177 GFEAAVAAGAKEVAIFAS--ASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPS------ 248 (398)
Q Consensus 177 ~ie~a~~~Gv~~v~i~~~--~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~------ 248 (398)
.++.+++.|+|-|-+.+. ..+-. + .+++.++.+.++.+.|++.|+++-..+.. .+.......+++
T Consensus 115 sve~a~~~GADAVk~lv~~g~d~~~-e-----~~~~q~~~l~rv~~ec~~~GiPlllEil~-y~~~~~~~~~~~~a~~~p 187 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLLYYDVDGDP-Q-----VNVQKQAYIERIGSECQAEDIPFFLEILT-YDETISNNSSVEFAKVKV 187 (332)
T ss_dssp CHHHHHHTTCSEEEEEEEECTTSCH-H-----HHHHHHHHHHHHHHHHHHHTCCEEEEEEE-CBTTBSCTTSHHHHTTHH
T ss_pred CHHHHHHcCCCEEEEEEEcCCCchH-H-----HHHHHHHHHHHHHHHHHHcCCceEEEEec-cCCCCCCCcchhhhccCH
Confidence 488999999997665433 22110 0 01356888999999999999998654442 111111234444
Q ss_pred -HHHHHHHHH--HhCCCCEEEEccCc------CcC------CHHHHHHHHHHHHhhCCCCeEEE-EeCCccchHHHHHHH
Q 015894 249 -KVAYVSKQL--YDMGCSEISLGDTI------GVG------TPGTVIPMLEAVLDAVPVDKLAV-HFHDTYGQALSNILA 312 (398)
Q Consensus 249 -~l~~~a~~l--~~~Gad~I~L~DT~------G~~------~P~~v~~lv~~l~~~~p~~~l~~-H~Hnd~GlA~ANala 312 (398)
.+...++.+ .++|+|.+-+.=|. |.. +-.+..+.++.+.+..| +|+-+ =.=-+.-.-+-..-.
T Consensus 188 ~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~-~P~v~lsgG~~~~~fl~~v~~ 266 (332)
T 3iv3_A 188 HKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTD-LPYIYLSAGVSAELFQETLVF 266 (332)
T ss_dssp HHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCS-SCEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCC-CCEEEECCCCCHHHHHHHHHH
Confidence 488999999 67799998776332 211 33455555666655544 35432 322344455666678
Q ss_pred HHHhCC
Q 015894 313 SLQMGI 318 (398)
Q Consensus 313 Al~aGa 318 (398)
|+++|+
T Consensus 267 A~~aGa 272 (332)
T 3iv3_A 267 AHKAGA 272 (332)
T ss_dssp HHHHTC
T ss_pred HHHcCC
Confidence 999999
No 166
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=91.81 E-value=2.8 Score=41.26 Aligned_cols=121 Identities=15% Similarity=0.179 Sum_probs=77.5
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC---------------CCC-------------------CCCCH-----
Q 015894 207 TIEDSLIRYRDVALAARELSIPVRGYLSCVVGC---------------PVE-------------------GMVPP----- 247 (398)
Q Consensus 207 s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~---------------~~~-------------------~r~~~----- 247 (398)
..++.++..+.+++.+++.|-.+.+.|... |- |-. ...+|
T Consensus 75 ~~d~~i~~~~~l~~~vh~~g~~i~~QL~H~-Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~ 153 (364)
T 1vyr_A 75 HSPEQIAAWKKITAGVHAEDGRIAVQLWHT-GRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALEL 153 (364)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCG
T ss_pred CCHHHHHHHHHHHHHHHhcCCeEEEEeccC-CcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCH
Confidence 345667778888888899998887777641 10 000 00122
Q ss_pred -------HHHHHHHHHHHhCCCCEEEE-------------------ccCcCcCC---HHHHHHHHHHHHhhCCCCeEEE-
Q 015894 248 -------SKVAYVSKQLYDMGCSEISL-------------------GDTIGVGT---PGTVIPMLEAVLDAVPVDKLAV- 297 (398)
Q Consensus 248 -------~~l~~~a~~l~~~Gad~I~L-------------------~DT~G~~~---P~~v~~lv~~l~~~~p~~~l~~- 297 (398)
+.+.+.++.+.++|+|.|-| .|-.|... +..+.++++++|+.++..+|++
T Consensus 154 ~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vr 233 (364)
T 1vyr_A 154 DEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIR 233 (364)
T ss_dssp GGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEE
Confidence 56777788889999998887 24455432 3457788999999996327888
Q ss_pred ----EeCCc---cch----HHHHHHHHHHhCCCEEeeccccC
Q 015894 298 ----HFHDT---YGQ----ALSNILASLQMGISTVDSSVSGL 328 (398)
Q Consensus 298 ----H~Hnd---~Gl----A~ANalaAl~aGa~~VD~Sv~Gl 328 (398)
..+++ .+. ++.-+.+.-++|++.|+.+..+.
T Consensus 234 ls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~ 275 (364)
T 1vyr_A 234 VSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDL 275 (364)
T ss_dssp ECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBT
T ss_pred EccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcc
Confidence 22332 122 33334455579999999986543
No 167
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=91.77 E-value=4 Score=38.69 Aligned_cols=108 Identities=14% Similarity=0.225 Sum_probs=70.4
Q ss_pred HHHHHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCc-------------------Cc
Q 015894 214 RYRDVALAARELSIP-VRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTI-------------------GV 273 (398)
Q Consensus 214 ~~~~~v~~ak~~G~~-v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~-------------------G~ 273 (398)
++.+..+.+|+.|-. +.+|++ .+.-+++...++++.+.+.|+|.|-|.=-. ..
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~-------aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G 78 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVT-------IGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAK 78 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEE-------TTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCeEEEEEe-------CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcC
Confidence 345556666766654 445555 233468899999999999999977654221 22
Q ss_pred CCHHHHHHHHHHHHhhCCCCeEEEEeCCc--cchHHH-HHHHHHHhCCCEEeeccccC
Q 015894 274 GTPGTVIPMLEAVLDAVPVDKLAVHFHDT--YGQALS-NILASLQMGISTVDSSVSGL 328 (398)
Q Consensus 274 ~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd--~GlA~A-NalaAl~aGa~~VD~Sv~Gl 328 (398)
.+..++-++++.+|+..+.+|+.+-+.-| +..++. -+..+.++|++.+=..=..+
T Consensus 79 ~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ 136 (271)
T 3nav_A 79 TTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPT 136 (271)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCG
T ss_pred CCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCH
Confidence 44556778999999886777888766544 233333 35566789999765544444
No 168
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=91.77 E-value=1 Score=43.30 Aligned_cols=82 Identities=23% Similarity=0.302 Sum_probs=70.6
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhC-CCCeEEEEe-CCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAV-PVDKLAVHF-HDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~l~~H~-Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|- ++.++-.++++.+.+.. +.+++-+|. +|+..-++..+..|-++|
T Consensus 31 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 110 (304)
T 3l21_A 31 GSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEG 110 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999996 56788888888888765 356788876 789999999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.|=+.
T Consensus 111 adavlv~ 117 (304)
T 3l21_A 111 AHGLLVV 117 (304)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9977554
No 169
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=91.61 E-value=2.8 Score=40.65 Aligned_cols=131 Identities=13% Similarity=0.080 Sum_probs=86.0
Q ss_pred HHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHH-hCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 015894 179 EAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAAR-ELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQL 257 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak-~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l 257 (398)
+.+.+-|+..+-++.. +. ....-|.+.++.++.+.+.++.++ +.|+.++.-+++. -..+++...+.++.+
T Consensus 85 ~~~~~dgV~y~Eir~~--P~-~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~------R~~~~~~a~~~~~~a 155 (326)
T 3pao_A 85 QKCKAQNVVHVEPFFD--PQ-THTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFL------RHLSEEQAQKTLDQA 155 (326)
T ss_dssp HHHHHTTEEEECCEEC--HH-HHHTTTCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEE------TTSCHHHHHHHHHHH
T ss_pred HHHHHcCCeEEEEEEC--hH-HhccCCCCHHHHHHHHHHHHHHHHhhCceEEEEEEEeC------CCCCHHHHHHHHHHH
Confidence 4556678776655443 33 223457889999998888888775 5688776444421 124667666666666
Q ss_pred HhC--CCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHH-hCCCEEe
Q 015894 258 YDM--GCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ-MGISTVD 322 (398)
Q Consensus 258 ~~~--Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~-aGa~~VD 322 (398)
.++ ++..|-|+-.=....|....+.++..++. +.++.+|+..+.+ ..+...|+. .|+++|+
T Consensus 156 ~~~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~--gl~~~~HagE~~~--~~~i~~al~~lg~~rig 219 (326)
T 3pao_A 156 LPFRDAFIAVGLDSSEVGHPPSKFQRVFDRARSE--GFLTVAHAGEEGP--PEYIWEALDLLKVERID 219 (326)
T ss_dssp GGGGGGCSEEEEESCCTTCCGGGGHHHHHHHHHT--TCEECEEESSSSC--HHHHHHHHHTTCCSSEE
T ss_pred hhccccceeeCCCCCCCCCCHHHHHHHHHHHHHc--CCceeeecCCCCC--HHHHHHHHhcCCCceee
Confidence 554 45556654322345678888888877663 4678889987755 467778895 8998763
No 170
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=91.61 E-value=2.6 Score=41.65 Aligned_cols=133 Identities=19% Similarity=0.104 Sum_probs=81.8
Q ss_pred HHHHHcCCCEEEEeccC--------chH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEeeeecCCCC-CCC
Q 015894 179 EAAVAAGAKEVAIFASA--------SES--FSKSNINCTIEDSLIRYRDVALAAREL-SI-PVRGYLSCVVGCPVE-GMV 245 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~--------Sd~--~~~~~~~~s~~~~l~~~~~~v~~ak~~-G~-~v~~~l~~~fg~~~~-~r~ 245 (398)
++|.++|.|.|.|-..- |+. .....+|-|.+.-.+.+.++++.+|+. |- .|.+-++..-..... ...
T Consensus 160 ~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~ 239 (362)
T 4ab4_A 160 ENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDAD 239 (362)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTT
T ss_pred HHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCC
Confidence 45678999999986552 232 223345667777777778888887765 43 455445421000000 112
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhC-CCEEe
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMG-ISTVD 322 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aG-a~~VD 322 (398)
+.+...++++.+.++|++.|.+.... ..| ++++.+++.++..-+..-. .....+..+++.| ||.|-
T Consensus 240 ~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~----~~~~~ik~~~~iPvi~~Gg-----it~e~a~~~l~~g~aD~V~ 306 (362)
T 4ab4_A 240 RAETFTYVARELGKRGIAFICSRERE--ADD----SIGPLIKEAFGGPYIVNER-----FDKASANAALASGKADAVA 306 (362)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC--CTT----CCHHHHHHHHCSCEEEESS-----CCHHHHHHHHHTTSCSEEE
T ss_pred cHHHHHHHHHHHHHhCCCEEEECCCC--CCH----HHHHHHHHHCCCCEEEeCC-----CCHHHHHHHHHcCCccEEE
Confidence 35678899999999999999886532 112 4677778776542233322 2356777888888 77653
No 171
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=91.61 E-value=2.4 Score=41.75 Aligned_cols=139 Identities=16% Similarity=0.073 Sum_probs=84.1
Q ss_pred HHHHHcCCCEEEEeccC--------chH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEeee--ecCCCCCC
Q 015894 179 EAAVAAGAKEVAIFASA--------SES--FSKSNINCTIEDSLIRYRDVALAAREL-SI-PVRGYLSCV--VGCPVEGM 244 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~--------Sd~--~~~~~~~~s~~~~l~~~~~~v~~ak~~-G~-~v~~~l~~~--fg~~~~~r 244 (398)
++|.++|.|.|.|-..- |+. .....+|-+.++-.+.+.++++.+|+. |- .|.+-++.. +.....+.
T Consensus 168 ~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~ 247 (364)
T 1vyr_A 168 ANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGP 247 (364)
T ss_dssp HHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCT
T ss_pred HHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCC
Confidence 35578999999985431 121 112345566777777788888888764 42 455444431 10000123
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCc-CcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhC-CCEEe
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTI-GVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMG-ISTVD 322 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~-G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aG-a~~VD 322 (398)
.+.+...++++.+.++|++.|.+.... -...+. -.++++.+++.++. ||..=.-- ....+..+++.| |+.|-
T Consensus 248 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~-~~~~~~~v~~~~~i-Pvi~~Ggi----t~~~a~~~l~~g~aD~V~ 321 (364)
T 1vyr_A 248 NEEADALYLIEELAKRGIAYLHMSETDLAGGKPY-SEAFRQKVRERFHG-VIIGAGAY----TAEKAEDLIGKGLIDAVA 321 (364)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCC-CHHHHHHHHHHCCS-EEEEESSC----CHHHHHHHHHTTSCSEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcc-cHHHHHHHHHHCCC-CEEEECCc----CHHHHHHHHHCCCccEEE
Confidence 467788899999999999999886521 000111 13567788888753 44433222 267788888988 88764
Q ss_pred e
Q 015894 323 S 323 (398)
Q Consensus 323 ~ 323 (398)
.
T Consensus 322 ~ 322 (364)
T 1vyr_A 322 F 322 (364)
T ss_dssp E
T ss_pred E
Confidence 4
No 172
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=91.61 E-value=8.2 Score=37.80 Aligned_cols=132 Identities=11% Similarity=-0.013 Sum_probs=78.5
Q ss_pred hHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHH-hC--CCcEEEEEeeeecCCCCCCCCHHHHHHH
Q 015894 177 GFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAAR-EL--SIPVRGYLSCVVGCPVEGMVPPSKVAYV 253 (398)
Q Consensus 177 ~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak-~~--G~~v~~~l~~~fg~~~~~r~~~~~l~~~ 253 (398)
.++.+++.|+..+.+++. +.+.....+.+.++.++.+.+.++.++ +. |+.++..+++. .. .+++...+.
T Consensus 120 ~l~e~~~~GV~y~E~r~d--p~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~gi~~~li~~~~----r~--~~~~~~~~~ 191 (371)
T 2pgf_A 120 AVFNKYKEGVVLMEFRYS--PTFVAFKYNLDIELIHQAIVKGIKEVVELLDHKIHVALMCIGD----TG--HEAANIKAS 191 (371)
T ss_dssp HHHHHHHHTEEEEEEEEC--HHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEE----ES--STTCCHHHH
T ss_pred HHHHHHHCCCEEEEEEEC--cccccccCCCCHHHHHHHHHHHHHHHHHHccCCCEEEEEEEec----CC--CCHHHHHHH
Confidence 356667889988877653 322123457788888888877777665 56 87766444432 11 122223333
Q ss_pred HHHHHh--CCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCcc-chHH-HHHHHHHHh-CCCEE
Q 015894 254 SKQLYD--MGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTY-GQAL-SNILASLQM-GISTV 321 (398)
Q Consensus 254 a~~l~~--~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~-GlA~-ANalaAl~a-Ga~~V 321 (398)
++.+.+ -++-.+.++..-.. |..+.+.++..++. +.++.+|++.+. | .. .+...|+.. |+++|
T Consensus 192 ~~~a~~~~~~vvg~dl~g~e~~--~~~~~~~~~~A~~~--gl~~~~HagE~~~~-~~~~~i~~al~~lg~~ri 259 (371)
T 2pgf_A 192 ADFCLKHKADFVGFDHGGHEVD--LKEYKEIFDYVRES--GVPLSVHAGEDVTL-PNLNTLYSAIQVLKVERI 259 (371)
T ss_dssp HHHHHHTTTTEEEEEEEESCCC--GGGGHHHHHHHHHT--TCCBEEEESCCTTS-SSSHHHHHHHHTSCCSEE
T ss_pred HHHHHhCCCCEEEEecCCCccc--HHHHHHHHHHHHHc--CCcEEEeeCCCCCC-CchHHHHHHHhccCCCEE
Confidence 333333 22333333322122 88888888887764 467999999873 2 22 566778886 98876
No 173
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=91.59 E-value=2.1 Score=37.84 Aligned_cols=158 Identities=11% Similarity=0.086 Sum_probs=83.2
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc-cCCcEEEEeCCHhhHHHHHHcCCCEEEEeccCchH
Q 015894 120 VKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV-EGARFPVLTPNLKGFEAAVAAGAKEVAIFASASES 198 (398)
Q Consensus 120 ~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~-~~~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~ 198 (398)
+-.+.++.+.+.|++.|++..+..+. .+..+..+.+++. .......++. ..++.+.++|++.|++... +.
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~~~~~~-----~~~~~~~~~l~~~~~~~~v~v~v~--~~~~~a~~~gad~v~l~~~--~~ 97 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRIKNAPT-----REMYEIGKTLRQLTREYDALFFVD--DRVDVALAVDADGVQLGPE--DM 97 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECCCSCCH-----HHHHHHHHHHHHHHHHTTCEEEEE--SCHHHHHHHTCSEEEECTT--SC
T ss_pred hHHHHHHHHHHCCCCEEEECCCCCCH-----HHHHHHHHHHHHHHHHcCCeEEEc--ChHHHHHHcCCCEEEECCc--cC
Confidence 34678889999999999998642110 0112222233321 1122222222 5678899999999976422 10
Q ss_pred HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE---ccCcCc--
Q 015894 199 FSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL---GDTIGV-- 273 (398)
Q Consensus 199 ~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L---~DT~G~-- 273 (398)
+. +.+ +..+ .++.+. ++. .+++.+ ..+.+.|+|.|.+ -+|.+-
T Consensus 98 --------~~----~~~----~~~~-~~~~~~--v~~---------~t~~e~----~~~~~~g~d~i~~~~~~~~~~~~~ 145 (215)
T 1xi3_A 98 --------PI----EVA----KEIA-PNLIIG--ASV---------YSLEEA----LEAEKKGADYLGAGSVFPTKTKED 145 (215)
T ss_dssp --------CH----HHH----HHHC-TTSEEE--EEE---------SSHHHH----HHHHHHTCSEEEEECSSCC----C
T ss_pred --------CH----HHH----HHhC-CCCEEE--Eec---------CCHHHH----HHHHhcCCCEEEEcCCccCCCCCC
Confidence 11 111 1112 344332 221 244443 2355789999876 233211
Q ss_pred CCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeec
Q 015894 274 GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 274 ~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
..|.. .+.++.+++.. ..|+.. .-|....|+..++++|++.|++.
T Consensus 146 ~~~~~-~~~l~~l~~~~-~~pvia----~GGI~~~nv~~~~~~Ga~gv~vg 190 (215)
T 1xi3_A 146 ARVIG-LEGLRKIVESV-KIPVVA----IGGINKDNAREVLKTGVDGIAVI 190 (215)
T ss_dssp CCCCH-HHHHHHHHHHC-SSCEEE----ESSCCTTTHHHHHTTTCSEEEES
T ss_pred CCCcC-HHHHHHHHHhC-CCCEEE----ECCcCHHHHHHHHHcCCCEEEEh
Confidence 12222 34456666554 234444 34666678888888999988865
No 174
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=91.58 E-value=7.7 Score=35.72 Aligned_cols=191 Identities=14% Similarity=0.084 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeC--------------CH--------
Q 015894 118 AVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTP--------------NL-------- 175 (398)
Q Consensus 118 ~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~--------------n~-------- 175 (398)
...-.+.++.+.++|++.||+..... .-.+.+++.+.+++ .+.++.++.. +.
T Consensus 40 ~~~~~~~l~~~~~~G~~~vEl~~~~~-----~~~~~~~~~~~l~~-~gl~~~~~~~~~p~~~~~~~l~~~d~~~r~~~~~ 113 (290)
T 2zvr_A 40 KGDLRKGMELAKRVGYQAVEIAVRDP-----SIVDWNEVKILSEE-LNLPICAIGTGQAYLADGLSLTHPNDEIRKKAIE 113 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECSCG-----GGSCHHHHHHHHHH-HTCCEEEEECTHHHHTTCCCTTCSSHHHHHHHHH
T ss_pred ccCHHHHHHHHHHhCCCEEEEcCCCc-----chhhHHHHHHHHHH-cCCeEEEEeccCccccCCCCCCCCCHHHHHHHHH
Confidence 34456678888899999999986421 11355666666553 2344433211 11
Q ss_pred ---hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHH
Q 015894 176 ---KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAY 252 (398)
Q Consensus 176 ---~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~ 252 (398)
+.++.|.+.|++.|.....-. .-+.+.++.++.+.+.++.+.+..-.|...+...-..+...-.+++.+.+
T Consensus 114 ~~~~~i~~A~~lG~~~v~~~~~g~------~~~~~~~~~~~~~~~~l~~l~~~a~~v~l~lEn~~~~~~~~~~~~~~~~~ 187 (290)
T 2zvr_A 114 RVVKHTEVAGMFGALVIIGLVRGR------REGRSYEETEELFIESMKRLLELTEHAKFVIEPLNRYETDFINTIDDALR 187 (290)
T ss_dssp HHHHHHHHHHHHTCEEEESGGGCC------CTTSCHHHHHHHHHHHHHHHHHHCSSCCEEECCCCTTTCSSCCSHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecCCCC------CCCcCHHHHHHHHHHHHHHHHHHhccCEEEEEeCCCcCccccCCHHHHHH
Confidence 123456667888776211000 01224455555544444333322211332232110001112245666666
Q ss_pred HHHHHHhCCCCEEE-EccCcCcCC-HHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCC
Q 015894 253 VSKQLYDMGCSEIS-LGDTIGVGT-PGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGG 330 (398)
Q Consensus 253 ~a~~l~~~Gad~I~-L~DT~G~~~-P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGe 330 (398)
+++.+ +.+.+. .-|+.=... -.+..+.++.+. + --.++|+||.. .
T Consensus 188 l~~~~---~~~~vgl~~D~~h~~~~g~d~~~~l~~~~---~-~i~~vHl~D~~--------------------------r 234 (290)
T 2zvr_A 188 ILRKI---NSNRVGILADTFHMNIEEVNIPESLKRAG---E-KLYHFHVADSN--------------------------R 234 (290)
T ss_dssp HHHHH---CCTTEEEEEEHHHHHHHCSSHHHHHHHHG---G-GEEEEEECCTT--------------------------S
T ss_pred HHHHc---CCCCEEEEEehhHhhhcCCCHHHHHHHhh---c-cEEEEEEcCCC--------------------------C
Confidence 65543 323222 225421110 012223333332 2 23678888841 1
Q ss_pred CCCCCCCCCCccHHHHHHHHHhCCCC
Q 015894 331 CPYAKGASGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 331 cp~a~graGNa~lE~vv~~L~~~Gi~ 356 (398)
+ .+| .|..+.+.++..|++.|++
T Consensus 235 ~--~~G-~G~id~~~~~~~L~~~gy~ 257 (290)
T 2zvr_A 235 W--APG-CGHFDFRSVFNTLKEIGYN 257 (290)
T ss_dssp S--STT-SSCCCHHHHHHHHHHTTCC
T ss_pred C--CCC-CcccCHHHHHHHHHHcCCC
Confidence 1 123 6889999999999987764
No 175
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=91.53 E-value=4.8 Score=40.04 Aligned_cols=19 Identities=21% Similarity=0.372 Sum_probs=16.8
Q ss_pred CCCccHHHHHHHHHhCCCC
Q 015894 338 SGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 338 aGNa~lE~vv~~L~~~Gi~ 356 (398)
.|.++...++.+|++.|++
T Consensus 306 ~G~vD~~~i~~aL~~~gY~ 324 (386)
T 3bdk_A 306 AGDIDMNAVVKLLVDYDWQ 324 (386)
T ss_dssp GSSCCHHHHHHHHHHTTCC
T ss_pred CCCcCHHHHHHHHHHhCCc
Confidence 7899999999999987763
No 176
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=91.51 E-value=2.1 Score=41.19 Aligned_cols=208 Identities=12% Similarity=0.088 Sum_probs=117.4
Q ss_pred HHHHHhcCCCEEEEecC-CC--CCcccC--CCCHHHHHHHHHhcc-CCcEEEEe--C----CH----hhHHHHHHcCCCE
Q 015894 125 IKLLVSSGLAVVEATSF-VS--PKWVPQ--LADAKDVMAAIQNVE-GARFPVLT--P----NL----KGFEAAVAAGAKE 188 (398)
Q Consensus 125 a~~L~~aGv~~IEvG~~-~~--~~~~p~--~~D~~~v~~~i~~~~-~~~l~~l~--~----n~----~~ie~a~~~Gv~~ 188 (398)
++.++++|++.|=+|.. .+ ....|. .-+.++++..++.+. .+.+.+++ + +. +-++...++|+.-
T Consensus 35 A~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaag 114 (298)
T 3eoo_A 35 AKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWGGAFNIARTIRSFIKAGVGA 114 (298)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCCCHHHHHHHHHHHHHhCCeE
Confidence 45678899999999852 11 111221 134567766666432 12223333 2 22 2356667899999
Q ss_pred EEEeccCchH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEE
Q 015894 189 VAIFASASES---FSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEI 265 (398)
Q Consensus 189 v~i~~~~Sd~---~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I 265 (398)
|+|-..+.+- |...+-=.+.++..++++.+++.++.-++.+.+- +.++. ....+..++=++...++|||.|
T Consensus 115 v~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~AR-TDa~~-----~~gldeai~Ra~ay~~AGAD~i 188 (298)
T 3eoo_A 115 VHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMAR-TDAAA-----AEGIDAAIERAIAYVEAGADMI 188 (298)
T ss_dssp EEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEE-ECTHH-----HHHHHHHHHHHHHHHHTTCSEE
T ss_pred EEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEe-ehhhh-----hcCHHHHHHHHHhhHhcCCCEE
Confidence 9999887531 1110111367888888866665433223333210 11110 0123445555666778999999
Q ss_pred EEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHH
Q 015894 266 SLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATED 345 (398)
Q Consensus 266 ~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~ 345 (398)
.+. |.-+++++.++.+.+. .|- .+-+-..+...+ -+.-.--++|+++|-....++ |+-+.++++
T Consensus 189 f~~---~~~~~ee~~~~~~~~~--~Pl-~~n~~~~g~tp~--~~~~eL~~lGv~~v~~~~~~~--------raa~~a~~~ 252 (298)
T 3eoo_A 189 FPE---AMKTLDDYRRFKEAVK--VPI-LANLTEFGSTPL--FTLDELKGANVDIALYCCGAY--------RAMNKAALN 252 (298)
T ss_dssp EEC---CCCSHHHHHHHHHHHC--SCB-EEECCTTSSSCC--CCHHHHHHTTCCEEEECSHHH--------HHHHHHHHH
T ss_pred EeC---CCCCHHHHHHHHHHcC--CCe-EEEeccCCCCCC--CCHHHHHHcCCeEEEEchHHH--------HHHHHHHHH
Confidence 885 3457888888888774 342 111111111111 123344567999998877766 677888899
Q ss_pred HHHHHHhCC
Q 015894 346 VVYMLNGLG 354 (398)
Q Consensus 346 vv~~L~~~G 354 (398)
++..+++.|
T Consensus 253 ~~~~i~~~g 261 (298)
T 3eoo_A 253 FYETVRRDG 261 (298)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHcC
Confidence 988887644
No 177
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=91.50 E-value=2.3 Score=42.03 Aligned_cols=197 Identities=16% Similarity=0.136 Sum_probs=115.9
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcc--cCCCCHH-----HHHHHHH---hccCCcEEEEeC---C--HhhHH
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWV--PQLADAK-----DVMAAIQ---NVEGARFPVLTP---N--LKGFE 179 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~--p~~~D~~-----~v~~~i~---~~~~~~l~~l~~---n--~~~ie 179 (398)
....+....++++-.+.+-+.|=-.+...-++. ..+.... .....++ +.-++.+....- . .+.++
T Consensus 39 v~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~ga~~~a~~v~~~A~~~~VPVaLHlDHg~~~~~~~i~ 118 (357)
T 3qm3_A 39 VVGTDSINAVLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAYGVPVILHTDHAARKLLPWID 118 (357)
T ss_dssp CCSHHHHHHHHHHHHHHTSCEEEEECHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGHHHHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccCccchhhHHHHHHHHHHHHHHHHHHCCCcEEEECCCCCccchHHHH
Confidence 467788888999999999987655432110110 0011111 0011122 112344444332 2 23344
Q ss_pred HHHH-----------cCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC------
Q 015894 180 AAVA-----------AGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE------ 242 (398)
Q Consensus 180 ~a~~-----------~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~------ 242 (398)
.+++ .|...|.+= .|. .+.+|.++.-++++++|++.|+.|++.|-..-|.++.
T Consensus 119 ~~i~a~~~~~~~~~~~GFtSVMiD--gS~--------lp~eENI~~Tk~vv~~ah~~gvsVEaELG~igG~Edgv~~~~~ 188 (357)
T 3qm3_A 119 GLIEANAQYKKTHGQALFSSHMLD--LSE--------ESLEENLSTCEVYLQKLDALGVALEIELGCTGGEEDGVDNTGI 188 (357)
T ss_dssp HHHHHHHHHHHHHSSCSCSEEECC--CTT--------SCHHHHHHHHHHHHHHHHHHTCEEEEECCCCCC-----CCSST
T ss_pred HHHHHhHHHHhhhcCCCCCEEEEe--CCC--------CCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccc
Confidence 4443 467777652 222 2578999999999999999999999887765444432
Q ss_pred ----CCCCHHHHHHHHHHHHhC-CCCEEEE--ccCcCc-------CCHHHHHHHHHHHHhhC--C---CCeEEEEeCCcc
Q 015894 243 ----GMVPPSKVAYVSKQLYDM-GCSEISL--GDTIGV-------GTPGTVIPMLEAVLDAV--P---VDKLAVHFHDTY 303 (398)
Q Consensus 243 ----~r~~~~~l~~~a~~l~~~-Gad~I~L--~DT~G~-------~~P~~v~~lv~~l~~~~--p---~~~l~~H~Hnd~ 303 (398)
-.++|+...+++++.-.. |+|.+.+ .-.=|. +.|..+.++-+.+++.+ | .+||.+|+=.
T Consensus 189 ~~~~~yT~Peea~~Fv~~tg~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~~~~~~~~vpLVlHGgS-- 266 (357)
T 3qm3_A 189 DNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGGS-- 266 (357)
T ss_dssp TCTTTSCCHHHHHHHHHHHTTTCSCEEEECCSSCCCSSCCSSCCCCCTHHHHHHHHHHHHHTTCSCSCCSCEEECSCT--
T ss_pred ccccccCCHHHHHHHHHHhCCCCcccEEEEecCCccCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCcEEEeCCC--
Confidence 148899988888765221 3454333 222222 24566666666666654 2 3678887754
Q ss_pred chHHHHHHHHHHhCCCEEee
Q 015894 304 GQALSNILASLQMGISTVDS 323 (398)
Q Consensus 304 GlA~ANalaAl~aGa~~VD~ 323 (398)
|........|++.|+.-|+.
T Consensus 267 G~p~e~i~~ai~~GV~KiNi 286 (357)
T 3qm3_A 267 GSELKDIKNAVSYGVIKMNI 286 (357)
T ss_dssp TCCHHHHHHHHHTTEEEEEE
T ss_pred CCCHHHHHHHHHCCceEEEe
Confidence 88889999999999876644
No 178
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=91.44 E-value=0.82 Score=44.96 Aligned_cols=70 Identities=10% Similarity=0.080 Sum_probs=51.2
Q ss_pred HHHHHHHhC--CCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeecccc
Q 015894 252 YVSKQLYDM--GCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSG 327 (398)
Q Consensus 252 ~~a~~l~~~--Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~G 327 (398)
+.++.+.+. |++.|.+-=+.| .|..+.+.++.+++.+|+++|.+.. .+....+..|+++||+.|+++..|
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g--~~~~~~~~i~~lr~~~~~~~vi~g~----v~t~e~A~~a~~aGaD~I~v~~g~ 192 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANG--YSEHFVEFVKDVRKRFPQHTIMAGN----VVTGEMVEELILSGADIIKVGIGP 192 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCT--TBHHHHHHHHHHHHHCTTSEEEEEE----ECSHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHhccCCCCEEEEEecCC--CcHHHHHHHHHHHHhcCCCeEEEEe----CCCHHHHHHHHHhCCCEEEECCCC
Confidence 345556665 899877632334 5677889999999999877887653 344677889999999999997543
No 179
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=91.37 E-value=0.6 Score=44.47 Aligned_cols=73 Identities=14% Similarity=0.126 Sum_probs=34.0
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEc--cCcCcCCH--HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCE
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLG--DTIGVGTP--GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGIST 320 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~--DT~G~~~P--~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~ 320 (398)
.+.+...++++.+.++|++.|-+. .+ +-..| ....++++.+++. +++++..|.-| ......|+++|++.
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~-~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n-----~~~i~~a~~~G~~~ 95 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVS-PKWVPQLADSREVMAGIRRA-DGVRYSVLVPN-----MKGYEAAAAAHADE 95 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSC-TTTCGGGTTHHHHHHHSCCC-SSSEEEEECSS-----HHHHHHHHHTTCSE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcC-ccccccccCHHHHHHHHHhC-CCCEEEEEeCC-----HHHHHHHHHCCCCE
Confidence 345555566666666666554442 11 11112 1233444444332 44555555522 23444555666665
Q ss_pred Eeec
Q 015894 321 VDSS 324 (398)
Q Consensus 321 VD~S 324 (398)
|...
T Consensus 96 V~i~ 99 (295)
T 1ydn_A 96 IAVF 99 (295)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 180
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=91.37 E-value=2.2 Score=44.17 Aligned_cols=140 Identities=16% Similarity=0.020 Sum_probs=85.2
Q ss_pred HHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHh-CC--CcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 015894 179 EAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARE-LS--IPVRGYLSCVVGCPVEGMVPPSKVAYVSK 255 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~-~G--~~v~~~l~~~fg~~~~~r~~~~~l~~~a~ 255 (398)
+.+.+-|+..+-+....++.+...+-+.+.++.++.+.+.++.+++ .| +.++.-+++. -..+++...+.++
T Consensus 207 ~d~a~dgV~Y~ElR~~f~p~~~~~g~~l~~~~vv~~v~~~~~~~~~~~~~fI~~rlI~~~~------R~~~~e~a~e~l~ 280 (508)
T 3lgd_A 207 QEFYEDNVLYMEIRARLLPVYELSGEHHDEEWSVKTYQEVAQKFVETHPEFIGIKIIYSDH------RSKDVAVIAESIR 280 (508)
T ss_dssp HHHHHTTEEEEEEEECCCCCBCTTSCBCCHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEEE------TTSCHHHHHHHHH
T ss_pred HHHHHcCceEEEEeecCchHhhccCCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEEEec------CCCCHHHHHHHHH
Confidence 4455678876666533333333333457899999999999988875 45 5565433321 1245666656555
Q ss_pred HHHhC------CCCEEEEccCcCcC-CHHHHHHHHHHHHhhCCCCeEEEEeCCccchH---HHHHHHHHHhCCCEEeec
Q 015894 256 QLYDM------GCSEISLGDTIGVG-TPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA---LSNILASLQMGISTVDSS 324 (398)
Q Consensus 256 ~l~~~------Gad~I~L~DT~G~~-~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA---~ANalaAl~aGa~~VD~S 324 (398)
.+.++ ++-.|-|+..-... .|....+.+...+..-.++++.+|+-.+.+.+ ..|...|+..|+++|+=.
T Consensus 281 ~a~~~~~~~~~~VvG~DLaG~E~~g~p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g~~~~~~i~~Al~Lga~RIgHG 359 (508)
T 3lgd_A 281 MAMGLRIKFPTVVAGFDLVGHEDTGHSLHDYKEALMIPAKDGVKLPYFFHAGETDWQGTSIDRNILDALMLNTTRIGHG 359 (508)
T ss_dssp HHHHHHHHCTTTEEEEEEESCTTTSCCTGGGHHHHTHHHHTTCCCCBCCEECCSSCCSSTTTTHHHHHHHTTCSSEEEC
T ss_pred HHHHHHhhCCCceEEeccCCCCCCCCCHHHHHHHHHHHHHHHcCCceeeecccccCCCCCcHHHHHHHHhcCCceeeee
Confidence 55443 34455664332122 35667777766433345678999998876544 457888888999987533
No 181
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=91.36 E-value=0.83 Score=44.25 Aligned_cols=116 Identities=19% Similarity=0.215 Sum_probs=81.8
Q ss_pred HHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCE-EEEccC-cCcCCHHHHHHHHHHHHhhCCC
Q 015894 215 YRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSE-ISLGDT-IGVGTPGTVIPMLEAVLDAVPV 292 (398)
Q Consensus 215 ~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~-I~L~DT-~G~~~P~~v~~lv~~l~~~~p~ 292 (398)
++++.+.|++.|+-|- .+.. .+.+.+..+.+.+.+.+... |.+.-. ..++....+..++..+.+ ..
T Consensus 5 ~~~ll~~A~~~~yAV~-AfNv---------~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~--~~ 72 (305)
T 1rvg_A 5 GLEILKKAREEGYGVG-AFNV---------NNMEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKE--AR 72 (305)
T ss_dssp HHHHHHHHHHHTCCEE-EEEC---------CSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHH--CS
T ss_pred HHHHHHHHHHCCCEEE-EEee---------CCHHHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHh--CC
Confidence 4577888999999874 3331 36788999999999999875 444321 222334556677777766 55
Q ss_pred CeEEEEeCCccchHHHHHHHHHHhCCC--EEeeccccCCCCCCCCCCCCCc-cHHHHHHHHHhC
Q 015894 293 DKLAVHFHDTYGQALSNILASLQMGIS--TVDSSVSGLGGCPYAKGASGNV-ATEDVVYMLNGL 353 (398)
Q Consensus 293 ~~l~~H~Hnd~GlA~ANalaAl~aGa~--~VD~Sv~GlGecp~a~graGNa-~lE~vv~~L~~~ 353 (398)
+|+.+|. |.|.....+..|+++|.+ ++|+|-..+-+ |. -|.+++.+.+..
T Consensus 73 VPValHl--DHg~~~e~~~~ai~~GFtSVMiDgS~~p~eE---------Ni~~Tk~vv~~ah~~ 125 (305)
T 1rvg_A 73 VPVAVHL--DHGSSYESVLRALRAGFTSVMIDKSHEDFET---------NVRETRRVVEAAHAV 125 (305)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHTTCSEEEECCTTSCHHH---------HHHHHHHHHHHHHHT
T ss_pred CcEEEEC--CCCCCHHHHHHHHHcCCCeeeeCCCCCCHHH---------HHHHHHHHHHHHHHc
Confidence 6777765 566678999999999998 77999887766 65 566777777643
No 182
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=91.36 E-value=2.7 Score=41.45 Aligned_cols=133 Identities=19% Similarity=0.121 Sum_probs=81.2
Q ss_pred HHHHHcCCCEEEEeccC--------chH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEeeeecCCC-CCCC
Q 015894 179 EAAVAAGAKEVAIFASA--------SES--FSKSNINCTIEDSLIRYRDVALAAREL-SI-PVRGYLSCVVGCPV-EGMV 245 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~--------Sd~--~~~~~~~~s~~~~l~~~~~~v~~ak~~-G~-~v~~~l~~~fg~~~-~~r~ 245 (398)
++|.++|.|.|.|-..- |+. ++...+|-|.+.-.+.+.++++.+|+. |. .|.+-++..-.... ....
T Consensus 168 ~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~ 247 (361)
T 3gka_A 168 ENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSD 247 (361)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSC
T ss_pred HHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCC
Confidence 45678999999986652 232 223345667777677777778777764 43 45544542100000 0112
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhC-CCEEe
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMG-ISTVD 322 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aG-a~~VD 322 (398)
+.+...++++.+.++|++.|.+.... ..| ++++.+++.++..-+..-. .-...+..+++.| ||.|-
T Consensus 248 ~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~----~~~~~ik~~~~iPvi~~Gg-----it~e~a~~~l~~G~aD~V~ 314 (361)
T 3gka_A 248 PAATFGHVARELGRRRIAFLFARESF--GGD----AIGQQLKAAFGGPFIVNEN-----FTLDSAQAALDAGQADAVA 314 (361)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC--STT----CCHHHHHHHHCSCEEEESS-----CCHHHHHHHHHTTSCSEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEECCCC--CCH----HHHHHHHHHcCCCEEEeCC-----CCHHHHHHHHHcCCccEEE
Confidence 35678899999999999999886532 122 5677788776542233322 2356778888888 77653
No 183
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=91.31 E-value=0.83 Score=46.63 Aligned_cols=72 Identities=18% Similarity=0.160 Sum_probs=54.9
Q ss_pred HHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeecccc
Q 015894 250 VAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSG 327 (398)
Q Consensus 250 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~G 327 (398)
..+.++.+.++|++.|.+.=+.| .|....+.++.+++.+|+.++.+- .++...-+..+.++|++.|.++..|
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G--~~~~~~e~i~~i~~~~p~~pvi~g----~~~t~e~a~~l~~~G~d~I~v~~~~ 309 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHG--HSRRVIETLEMIKADYPDLPVVAG----NVATPEGTEALIKAGADAVKVGVGP 309 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC--SSHHHHHHHHHHHHHCTTSCEEEE----EECSHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHHHhCCCEEEEEecCC--chHHHHHHHHHHHHHCCCceEEeC----CcCCHHHHHHHHHcCCCEEEEcCCC
Confidence 34567888999999999843334 677888999999999987777663 2444556688889999999996543
No 184
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=91.25 E-value=2.8 Score=40.20 Aligned_cols=140 Identities=18% Similarity=0.137 Sum_probs=87.8
Q ss_pred HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 015894 178 FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQL 257 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l 257 (398)
++.|.+.|+.-|.+. +.+. . .+.+..+..++.| +.+.|.|. +..+.+--..-++.+
T Consensus 80 c~eA~~~g~aaVCV~----P~~V------------~---~a~~~L~~s~V~V----~tVigFP~-G~~~~~~Kv~Ea~~A 135 (288)
T 3oa3_A 80 CAEAKEYGFATVCVR----PDYV------------S---RAVQYLQGTQVGV----TCVIGFHE-GTYSTDQKVSEAKRA 135 (288)
T ss_dssp HHHHHHHTCSEEEEC----GGGH------------H---HHHHHTTTSSCEE----EEEESTTT-SCSCHHHHHHHHHHH
T ss_pred HHHHHhcCCcEEEEC----HHHH------------H---HHHHHcCCCCCeE----EEEeCCCC-CCCcHHHHHHHHHHH
Confidence 356677899988885 2221 1 1122223334444 33455675 344455445557788
Q ss_pred HhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCCC--C--eEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCC
Q 015894 258 YDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVPV--D--KLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGG 330 (398)
Q Consensus 258 ~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~--~--~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGe 330 (398)
.+.|||.|-+.=-.|. ..-..+.+-|..+++..+. + .|+.-..++-.... .+..|+++|||+|=+| .|++
T Consensus 136 i~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~-A~~ia~eaGADfVKTS-TGf~- 212 (288)
T 3oa3_A 136 MQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIA-GCVLSSLAGADYVKTS-TGFN- 212 (288)
T ss_dssp HHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHH-HHHHHHHTTCSEEECC-CSSS-
T ss_pred HHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHH-HHHHHHHcCCCEEEcC-CCCC-
Confidence 8899999987766776 4557788888888887542 1 23333445544443 4677889999999999 6664
Q ss_pred CCCCCCCCCCccHHHHHHHHH
Q 015894 331 CPYAKGASGNVATEDVVYMLN 351 (398)
Q Consensus 331 cp~a~graGNa~lE~vv~~L~ 351 (398)
+|++..|++..+.+
T Consensus 213 -------~~GAT~edv~lmr~ 226 (288)
T 3oa3_A 213 -------GPGASIENVSLMSA 226 (288)
T ss_dssp -------SCCCCHHHHHHHHH
T ss_pred -------CCCCCHHHHHHHHH
Confidence 35677777665543
No 185
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=91.24 E-value=4.8 Score=38.78 Aligned_cols=179 Identities=13% Similarity=0.105 Sum_probs=104.7
Q ss_pred CHHHHHHHHHHHHhc----CCCEEEEecCCC-CCcccC-CC--CHHHHHHHHHhc---cCCcEEEEeCCHhhHHHHHHcC
Q 015894 117 PAVVKVELIKLLVSS----GLAVVEATSFVS-PKWVPQ-LA--DAKDVMAAIQNV---EGARFPVLTPNLKGFEAAVAAG 185 (398)
Q Consensus 117 ~~~~k~~ia~~L~~a----Gv~~IEvG~~~~-~~~~p~-~~--D~~~v~~~i~~~---~~~~l~~l~~n~~~ie~a~~~G 185 (398)
+.++.+++++.|.++ |+..+=-++|-- |+--|. +. ..++=++.+++. .+..+..=..+...++.+.+.
T Consensus 53 s~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~- 131 (298)
T 3fs2_A 53 TRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV- 131 (298)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT-
T ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh-
Confidence 788889999999876 466555444431 222120 10 112233334322 244443333467778877777
Q ss_pred CCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHhCCCCE
Q 015894 186 AKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGM-VPPSKVAYVSKQLYDMGCSE 264 (398)
Q Consensus 186 v~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r-~~~~~l~~~a~~l~~~Gad~ 264 (398)
+|.+.|-.. + +..- +.++++.+.|.+|- +. .+. .+++++...++.+.+.|.+.
T Consensus 132 vd~lkIgA~--~--------~~n~-------~LLr~va~~gkPVi--lK-------~Gms~t~~ei~~ave~i~~~Gn~~ 185 (298)
T 3fs2_A 132 VDVLQIPAF--L--------CRQT-------DLLIAAARTGRVVN--VK-------KGQFLAPWDMKNVLAKITESGNPN 185 (298)
T ss_dssp CSEEEECGG--G--------TTCH-------HHHHHHHHTTSEEE--EE-------CCTTCCGGGHHHHHHHHHTTTCCC
T ss_pred CCEEEECcc--c--------cCCH-------HHHHHHHccCCcEE--Ee-------CCCCCCHHHHHHHHHHHHHcCCCe
Confidence 898888532 1 1111 13444556788875 33 122 47888889999999999988
Q ss_pred EEEccCcCcCC-HH---HHHHHHHHHHhhCCCCeEEE-EeCC-------------ccchHHHHHHHHHHhCCC--EEeec
Q 015894 265 ISLGDTIGVGT-PG---TVIPMLEAVLDAVPVDKLAV-HFHD-------------TYGQALSNILASLQMGIS--TVDSS 324 (398)
Q Consensus 265 I~L~DT~G~~~-P~---~v~~lv~~l~~~~p~~~l~~-H~Hn-------------d~GlA~ANalaAl~aGa~--~VD~S 324 (398)
|.|+.-.-... +. +++. +..+++ + ..||.+ ..|- +..+...-++||+.+||+ +|+.=
T Consensus 186 iiL~erg~~y~~~~~~vdl~~-i~~lk~-~-~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H 262 (298)
T 3fs2_A 186 VLATERGVSFGYNTLVSDMRA-LPIMAG-L-GAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETH 262 (298)
T ss_dssp EEEEECCEECSSSCEECCTTH-HHHHHT-T-TSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEE
T ss_pred EEEEECCCCCCCCCCccCHHH-HHHHHH-c-CCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEec
Confidence 88876432211 11 2333 455676 6 568888 6664 233447889999999999 77554
Q ss_pred c
Q 015894 325 V 325 (398)
Q Consensus 325 v 325 (398)
.
T Consensus 263 ~ 263 (298)
T 3fs2_A 263 E 263 (298)
T ss_dssp S
T ss_pred C
Confidence 3
No 186
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=91.22 E-value=3.2 Score=40.11 Aligned_cols=204 Identities=14% Similarity=0.126 Sum_probs=113.0
Q ss_pred HHHHHHhcCCCEEEEecC------CCCCcccCCCCHHHHHHHHHhcc-CCcEEEEe--C----CH----hhHHHHHHcCC
Q 015894 124 LIKLLVSSGLAVVEATSF------VSPKWVPQLADAKDVMAAIQNVE-GARFPVLT--P----NL----KGFEAAVAAGA 186 (398)
Q Consensus 124 ia~~L~~aGv~~IEvG~~------~~~~~~p~~~D~~~v~~~i~~~~-~~~l~~l~--~----n~----~~ie~a~~~Gv 186 (398)
-++.++++|++.|=+|.. ..|+..+ -+.++++..++.+. .+.+.+++ + +. +-++...++|+
T Consensus 41 sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~--vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~~l~~aGa 118 (305)
T 3ih1_A 41 AALVARNTGFLALYLSGAAYTASKGLPDLGI--VTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTAVEMVEAKV 118 (305)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHTCCSSSC--SCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEECcHHHHHhCCCCCCCc--CCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHHHHhCC
Confidence 456778899999999852 1233222 34566666665432 11222333 2 22 23566678999
Q ss_pred CEEEEeccCchH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCC
Q 015894 187 KEVAIFASASES---FSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCS 263 (398)
Q Consensus 187 ~~v~i~~~~Sd~---~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad 263 (398)
.-|.|-..+.+- |...+-=.+.++..++++.+++. .-++.+.+- +.++ .....+..++-++...++|||
T Consensus 119 agv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A--~~~~~I~AR-tda~-----~~~g~~~ai~Ra~ay~eAGAD 190 (305)
T 3ih1_A 119 AAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV--APSLYIVAR-TDAR-----GVEGLDEAIERANAYVKAGAD 190 (305)
T ss_dssp SEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH--CTTSEEEEE-ECCH-----HHHCHHHHHHHHHHHHHHTCS
T ss_pred cEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc--CCCeEEEEe-eccc-----cccCHHHHHHHHHHHHHcCCC
Confidence 999998876431 11111112566777776554444 223333210 0000 001256777778888899999
Q ss_pred EEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH-HHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCcc
Q 015894 264 EISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA-LSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVA 342 (398)
Q Consensus 264 ~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA-~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~ 342 (398)
.|.+.= .-+++.+.++.+. ++. |+-+-.- .+|.. .-+.-.--++|+++|-.....+ |+-+.+
T Consensus 191 ~i~~e~---~~~~~~~~~i~~~----~~~-P~~~n~~-~~g~tp~~~~~eL~~lGv~~v~~~~~~~--------raa~~a 253 (305)
T 3ih1_A 191 AIFPEA---LQSEEEFRLFNSK----VNA-PLLANMT-EFGKTPYYSAEEFANMGFQMVIYPVTSL--------RVAAKA 253 (305)
T ss_dssp EEEETT---CCSHHHHHHHHHH----SCS-CBEEECC-TTSSSCCCCHHHHHHTTCSEEEECSHHH--------HHHHHH
T ss_pred EEEEcC---CCCHHHHHHHHHH----cCC-CEEEeec-CCCCCCCCCHHHHHHcCCCEEEEchHHH--------HHHHHH
Confidence 998852 3345555555444 432 3422110 01110 1123444567999998777766 677888
Q ss_pred HHHHHHHHHhCC
Q 015894 343 TEDVVYMLNGLG 354 (398)
Q Consensus 343 lE~vv~~L~~~G 354 (398)
+++++..+++.|
T Consensus 254 ~~~~~~~i~~~g 265 (305)
T 3ih1_A 254 YENVFTLIKETG 265 (305)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHhcC
Confidence 899888887644
No 187
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=91.20 E-value=0.6 Score=43.68 Aligned_cols=118 Identities=18% Similarity=0.286 Sum_probs=73.3
Q ss_pred HHHHHHHHHhc--cCCcEEEEe-CCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcE
Q 015894 153 AKDVMAAIQNV--EGARFPVLT-PNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPV 229 (398)
Q Consensus 153 ~~~v~~~i~~~--~~~~l~~l~-~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v 229 (398)
.+.+...++++ .+++++.++ +..+.++.|.++|++.|-++.+ .+....-....+..|+++.+++++|+++|+.|
T Consensus 113 ~~~l~~~i~~L~~~GIrVSLFIDpd~~qi~aA~~~GA~~IELhTG---~Ya~a~~~~~~~~el~~i~~aa~~A~~lGL~V 189 (243)
T 1m5w_A 113 RDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTG---CYADAKTDAEQAQELARIAKAATFAASLGLKV 189 (243)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHTTCSEEEEECH---HHHHCCSHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCcCEEEEech---hhhcCCCchhHHHHHHHHHHHHHHHHHcCCEE
Confidence 34444455543 367777776 6788999999999999999865 23222111124567899999999999999998
Q ss_pred EEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE-----ccCcCcCCHHHHHHHHHHH
Q 015894 230 RGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL-----GDTIGVGTPGTVIPMLEAV 286 (398)
Q Consensus 230 ~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L-----~DT~G~~~P~~v~~lv~~l 286 (398)
.+ | ++ .+.+.+..+++ =-+...++| ++..=++.+..|+++.+.+
T Consensus 190 nA------G---Hg-L~y~Nv~~ia~---ip~i~ElnIGHaiia~Al~~Gl~~aV~~m~~~~ 238 (243)
T 1m5w_A 190 NA------G---HG-LTYHNVKAIAA---IPEMHELNIGHAIIGRAVMTGLKDAVAEMKRLM 238 (243)
T ss_dssp EE------E---SS-CCTTTHHHHHT---CTTEEEEEECHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ec------C---CC-CCHHHHHHHhh---CCCCeEEccCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 73 1 22 33344444421 124556655 3444455566666665555
No 188
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=91.19 E-value=9 Score=40.00 Aligned_cols=218 Identities=14% Similarity=0.130 Sum_probs=119.2
Q ss_pred CCHHHHHH----HHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc-cCCcEEE-Ee-C-C---Hh--hH----
Q 015894 116 VPAVVKVE----LIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV-EGARFPV-LT-P-N---LK--GF---- 178 (398)
Q Consensus 116 ~~~~~k~~----ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~-~~~~l~~-l~-~-n---~~--~i---- 178 (398)
.+.++-.+ .++.|.+.|+|.+=+-.+.+ ..+.+..+..+++. ++..+.+ ++ . + .. .+
T Consensus 119 ~~~~e~~~~~~~qi~~l~~~gvD~l~~ET~~~------~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~ 192 (566)
T 1q7z_A 119 TLFEEFYENFRETVEIMVEEGVDGIIFETFSD------ILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFA 192 (566)
T ss_dssp BCHHHHHHHHHHHHHHHHHTTCSEEEEEEECC------HHHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEeccCC------HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHH
Confidence 45555433 56778899999876643211 12333444455542 4443322 22 1 1 11 23
Q ss_pred HHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEeeeecCC---CC---CCCCHHHHH
Q 015894 179 EAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAAREL-SIPVRGYLSCVVGCP---VE---GMVPPSKVA 251 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~-G~~v~~~l~~~fg~~---~~---~r~~~~~l~ 251 (398)
......|++.|.+=++..+ +. +..+++..++. ...+.+|=. -|.| +. ...+|+++.
T Consensus 193 ~~l~~~~~~avG~NC~~gp-----------~~----~~~~l~~l~~~~~~p~~vyPN--aG~p~~~~~~~~~~~~p~~~a 255 (566)
T 1q7z_A 193 ITFDELDIDALGINCSLGP-----------EE----ILPIFQELSQYTDKFLVVEPN--AGKPIVENGKTVYPLKPHDFA 255 (566)
T ss_dssp HHHHTSSCSEEEEESSSCH-----------HH----HHHHHHHHHHTCCSEEEEECC--SSSCEEETTEEECCCCHHHHH
T ss_pred HHhhccCCCEEEEeCCCCH-----------HH----HHHHHHHHHhcCCCEEEEEcC--CCCCcccCCccccCCCHHHHH
Confidence 3334478887777555433 22 22334444333 555544332 2333 11 124689999
Q ss_pred HHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCC----Ce--E----------------EEEe----------
Q 015894 252 YVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPV----DK--L----------------AVHF---------- 299 (398)
Q Consensus 252 ~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~----~~--l----------------~~H~---------- 299 (398)
+.++.+.+.|+..|.=|= ..+|++++.+-+.++..-|. .+ . +--.
T Consensus 256 ~~~~~~~~~G~~iiGGCC---GTtP~hI~aia~~~~~~~p~~~~~~~~~~~~s~~~~~~~~~~~iiGer~N~Tg~dsf~~ 332 (566)
T 1q7z_A 256 VHIDSYYELGVNIFGGCC---GTTPEHVKLFRKVLGNRKPLQRKKKRIFAVSSPSKLVTFDHFVVIGERINPAGRKKLWA 332 (566)
T ss_dssp TTHHHHHHTTCSEECCCT---TCCHHHHHHHHHHHCSCCCCCCCCCCCCEEECSSCEEESSSCEEEEEEECCTTCHHHHH
T ss_pred HHHHHHHHcCCcEEcccc---CCCHHHHHHHHHHhcCCCCCCcccCccceecCCceeeccccceEEEEEecCCCChhHHH
Confidence 999999999988774221 24899999998888653321 11 1 1111
Q ss_pred ---CCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHh-CCCCCccChHHHHH
Q 015894 300 ---HDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNG-LGVRTNVDIRKLMI 366 (398)
Q Consensus 300 ---Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~-~Gi~t~iDl~~L~~ 366 (398)
|++..-++.-+..-++.||++||... |... ...--.++.++-.+.. .++..-||..+-.-
T Consensus 333 ~~~~~~~~~a~~~A~~~v~~GAdiIDIgp-g~~~------v~~~ee~~rvv~~i~~~~~vpisIDT~~~~v 396 (566)
T 1q7z_A 333 EMQKGNEEIVIKEAKTQVEKGAEVLDVNF-GIES------QIDVRYVEKIVQTLPYVSNVPLSLDIQNVDL 396 (566)
T ss_dssp HHHTTCCHHHHHHHHHHHHTTCSEEEEEC-SSGG------GSCHHHHHHHHHHHHHHTCSCEEEECCCHHH
T ss_pred HhhcCCHHHHHHHHHHHHHCCCCEEEECC-CCCC------CCHHHHHHHHHHHHHhhCCceEEEeCCCHHH
Confidence 23556788888899999999999983 2222 2333344445555543 35544566544333
No 189
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=91.17 E-value=2 Score=43.42 Aligned_cols=198 Identities=14% Similarity=0.067 Sum_probs=116.8
Q ss_pred hHHHHHHcCCCEEEEeccCc-hH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC-------C--
Q 015894 177 GFEAAVAAGAKEVAIFASAS-ES---FSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE-------G-- 243 (398)
Q Consensus 177 ~ie~a~~~Gv~~v~i~~~~S-d~---~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~-------~-- 243 (398)
-++..+++|+-.|+|-+.+. +- |..-+-=.+.++.+++++.+...+...|..+.+ +.- ....-. .
T Consensus 168 tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vI-iAR-TDa~~a~li~s~~d~~ 245 (429)
T 1f8m_A 168 LQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVV-IAR-TDAEAATLITSDVDER 245 (429)
T ss_dssp HHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEE-EEE-ECTTTCCEESCCCSTT
T ss_pred HHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEE-EEE-echhhhcccccccccc
Confidence 46777899999999998873 21 111111146899999998777777667765321 111 100000 0
Q ss_pred -----------------CCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccc--
Q 015894 244 -----------------MVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYG-- 304 (398)
Q Consensus 244 -----------------r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~G-- 304 (398)
....+..++=++...+ |||.|.+. .|.-+++++.++.+.++..+|...+.+=+--.+.
T Consensus 246 d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e--~~~~~~eei~~f~~~v~~~~P~~~La~n~sPsf~w~ 322 (429)
T 1f8m_A 246 DQPFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWME--TGTPDLEAARQFSEAVKAEYPDQMLAYNCSPSFNWK 322 (429)
T ss_dssp TGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEEC--CSSCCHHHHHHHHHHHHTTCTTCEEEEECCTTSCHH
T ss_pred ccccccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeC--CCCCCHHHHHHHHHHhcccCCCceeecCCCCCCCcc
Confidence 1234555555555556 89999874 2346899999999999987886545432211111
Q ss_pred --hH---HHH-HHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCccChHHHHHHHHHHHHHhCCC
Q 015894 305 --QA---LSN-ILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRT 378 (398)
Q Consensus 305 --lA---~AN-alaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~t~iDl~~L~~~~~~v~~~~g~~ 378 (398)
+. +.+ .-..-++|+.++=.++.++ ++-+.++++++..+.+.|... ...| +--+.-.+..|..
T Consensus 323 ~~~~~~~~~~f~~eL~~lG~~~v~~~l~~~--------raa~~a~~~~a~~~~~~G~~a---y~e~-Q~~e~~~~~~g~~ 390 (429)
T 1f8m_A 323 KHLDDATIAKFQKELAAMGFKFQFITLAGF--------HALNYSMFDLAYGYAQNQMSA---YVEL-QEREFAAEERGYT 390 (429)
T ss_dssp HHCCHHHHHHHHHHHHHHTEEEEEETTHHH--------HHHHHHHHHHHHHHHHHTHHH---HHHH-HHHHHHHGGGTCC
T ss_pred cccchhhHhHHHHHHHHcCCeEEEECcHHH--------HHHHHHHHHHHHHHHHcCChH---HHHH-hHHHHhhhccCcc
Confidence 00 111 2233458999999999887 677888999988887755311 1111 1122223345666
Q ss_pred CCCCccccccccc
Q 015894 379 SGSKTAIALSKTS 391 (398)
Q Consensus 379 ~~~~~pivG~~~f 391 (398)
.-.+.-.+|.+.|
T Consensus 391 ~~~hq~~~G~~~~ 403 (429)
T 1f8m_A 391 ATKHQREVGAGYF 403 (429)
T ss_dssp TTSHHHHTTHHHH
T ss_pred hhhhhhhhccchH
Confidence 6666666665544
No 190
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=91.13 E-value=2.1 Score=41.70 Aligned_cols=142 Identities=15% Similarity=0.165 Sum_probs=91.3
Q ss_pred HHHHHHHHHH-hcCCCEEEEecC-CCCCcccCCCCHHHHHHHHHhc---cCCcEEEE-----eCCHhhHHHHHHcCCCEE
Q 015894 120 VKVELIKLLV-SSGLAVVEATSF-VSPKWVPQLADAKDVMAAIQNV---EGARFPVL-----TPNLKGFEAAVAAGAKEV 189 (398)
Q Consensus 120 ~k~~ia~~L~-~aGv~~IEvG~~-~~~~~~p~~~D~~~v~~~i~~~---~~~~l~~l-----~~n~~~ie~a~~~Gv~~v 189 (398)
...++++.+. +.|.+.|++|.- ..|...+ .+.++..+.++.+ .++.++.- +.+.+-+++++++|.+..
T Consensus 81 ~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~--vs~ee~~~~V~~v~~~~~vPlsIDg~~~~T~~~eV~eaAleagag~~ 158 (323)
T 4djd_D 81 EPGRWAQKCVAEYGADLIYLKLDGADPEGAN--HSVDQCVATVKEVLQAVGVPLVVVGCGDVEKDHEVLEAVAEAAAGEN 158 (323)
T ss_dssp CHHHHHHHHHHTTCCSEEEEECGGGCTTTTC--CCHHHHHHHHHHHHHHCCSCEEEECCSCHHHHHHHHHHHHHHTTTSC
T ss_pred hHHHHHHHHHHHcCCCEEEEcCccCCCCCCC--CCHHHHHHHHHHHHhhCCceEEEECCCCCCCCHHHHHHHHHhcCCCC
Confidence 3577888887 999999999854 3343222 2345555555533 46666666 444566789999887632
Q ss_pred EEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCC--CEEEE
Q 015894 190 AIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGC--SEISL 267 (398)
Q Consensus 190 ~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Ga--d~I~L 267 (398)
.+..+++. +++.++...|+++|..|. ++. + .+.+.+.++.+.+.++|+ +.|.|
T Consensus 159 ~lINsv~~---------------~~~~~m~~laa~~g~~vV--lmh----~----~d~~~~~~l~~~a~~~GI~~e~IIl 213 (323)
T 4djd_D 159 LLLGNAEQ---------------ENYKSLTAACMVHKHNII--ARS----P----LDINICKQLNILINEMNLPLDHIVI 213 (323)
T ss_dssp CEEEEEBT---------------TBCHHHHHHHHHHTCEEE--EEC----S----SCHHHHHHHHHHHHTTTCCGGGEEE
T ss_pred CeEEECCc---------------ccHHHHHHHHHHhCCeEE--EEc----c----chHHHHHHHHHHHHHcCCCHHHEEE
Confidence 22223332 112355677788898775 231 2 246888888889999999 56776
Q ss_pred ccCcC-c-CCHHHHHHHHHHHHh
Q 015894 268 GDTIG-V-GTPGTVIPMLEAVLD 288 (398)
Q Consensus 268 ~DT~G-~-~~P~~v~~lv~~l~~ 288 (398)
==.+| . -+.++..++++.++.
T Consensus 214 DPg~g~fgk~~e~~l~~l~~ir~ 236 (323)
T 4djd_D 214 DPSIGGLGYGIEYSFSIMERIRL 236 (323)
T ss_dssp ECCCCCTTTTHHHHHHHHHHHHH
T ss_pred eCCCccccCCHHHHHHHHHHHHH
Confidence 44444 2 267888888988885
No 191
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=91.09 E-value=6.9 Score=37.80 Aligned_cols=150 Identities=14% Similarity=0.084 Sum_probs=90.1
Q ss_pred cCCcEEEEe-CCHhhHHHHHHcCCCEEEEe-ccCchH-HHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC
Q 015894 164 EGARFPVLT-PNLKGFEAAVAAGAKEVAIF-ASASES-FSKSN-INCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGC 239 (398)
Q Consensus 164 ~~~~l~~l~-~n~~~ie~a~~~Gv~~v~i~-~~~Sd~-~~~~~-~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~ 239 (398)
++..+.++. .+.-....+.++|++.+.+. .+++-. +-..- .-.|.++.+..++.+.+.+ ...+.|.+.+
T Consensus 23 ~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~-~~~~PviaD~------ 95 (307)
T 3lye_A 23 TDELIVCPGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLD-PFGPPLIADM------ 95 (307)
T ss_dssp CCCCEEEEEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSS-TTSCCEEEEC------
T ss_pred CCCeEEEecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccC-CCCCcEEEEC------
Confidence 344455544 45555566677999998883 333322 11111 2347788877765544321 1135554322
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcC-----------cCCHHHHHHHHHHHHhhC----CCCeEEEEeCC---
Q 015894 240 PVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIG-----------VGTPGTVIPMLEAVLDAV----PVDKLAVHFHD--- 301 (398)
Q Consensus 240 ~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~----p~~~l~~H~Hn--- 301 (398)
|.. -.+++.+.+.++.+.++|+..|.|-|..+ +....+..+.|++.++.. |+.-|-.-+-.
T Consensus 96 d~G-yg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~ 174 (307)
T 3lye_A 96 DTG-YGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQS 174 (307)
T ss_dssp TTC-SSSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHH
T ss_pred CCC-CCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhc
Confidence 222 23678888899999999999999999986 334455666666666432 34333333322
Q ss_pred -ccchHHHHHHHHHHhCCCEE
Q 015894 302 -TYGQALSNILASLQMGISTV 321 (398)
Q Consensus 302 -d~GlA~ANalaAl~aGa~~V 321 (398)
.+--|+.-+.+-.++|||.|
T Consensus 175 ~gldeAi~Ra~ay~eAGAD~i 195 (307)
T 3lye_A 175 LGYEECIERLRAARDEGADVG 195 (307)
T ss_dssp HCHHHHHHHHHHHHHTTCSEE
T ss_pred cCHHHHHHHHHHHHHCCCCEE
Confidence 23357888888899999966
No 192
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=91.09 E-value=1.5 Score=41.35 Aligned_cols=145 Identities=18% Similarity=0.141 Sum_probs=91.1
Q ss_pred CcEEEEe-CCHhhHHHHHHcCCCEEEEec-cCchHHHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC
Q 015894 166 ARFPVLT-PNLKGFEAAVAAGAKEVAIFA-SASESFSKSN-INCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE 242 (398)
Q Consensus 166 ~~l~~l~-~n~~~ie~a~~~Gv~~v~i~~-~~Sd~~~~~~-~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~ 242 (398)
-++.++. .+.-..+.+.++|++.|.+.. +++-.+-... ...|.++.+...+.+.+.+ ...|.+.+ |..
T Consensus 20 ~~i~~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~---~~pviaD~------~~G 90 (255)
T 2qiw_A 20 KLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAV---SIPVSVDV------ESG 90 (255)
T ss_dssp CCEECCEESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHC---SSCEEEEC------TTC
T ss_pred CcEEEecCcCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcC---CCCEEecc------CCC
Confidence 3444443 344445566679999998863 3442221111 2457888888887766654 35555333 332
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCc-----CcCCHHHHHHHHHHHHhhCC--CCeEEEEeCCc------------c
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTI-----GVGTPGTVIPMLEAVLDAVP--VDKLAVHFHDT------------Y 303 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~-----G~~~P~~v~~lv~~l~~~~p--~~~l~~H~Hnd------------~ 303 (398)
+-.++ .+.++++.+.|+..|.|-|.. .+..+.++.+.|+++++... ++++-+-.|.| .
T Consensus 91 yg~~~---~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~ 167 (255)
T 2qiw_A 91 YGLSP---ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPM 167 (255)
T ss_dssp TTCCH---HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHH
T ss_pred cCcHH---HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHH
Confidence 22234 677788888999999999986 23455778888998887621 23444444444 3
Q ss_pred chHHHHHHHHHHhCCCEEe
Q 015894 304 GQALSNILASLQMGISTVD 322 (398)
Q Consensus 304 GlA~ANalaAl~aGa~~VD 322 (398)
--++.-+.+-.+|||+.|=
T Consensus 168 ~~ai~ra~a~~eAGAd~i~ 186 (255)
T 2qiw_A 168 VEAIKRIKLMEQAGARSVY 186 (255)
T ss_dssp HHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHcCCcEEE
Confidence 4577788888899999663
No 193
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=91.01 E-value=12 Score=36.90 Aligned_cols=195 Identities=15% Similarity=0.137 Sum_probs=115.3
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcc--cCCCC---HH-H------HHHHHH---hccCCcEEEEeC---C--
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWV--PQLAD---AK-D------VMAAIQ---NVEGARFPVLTP---N-- 174 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~--p~~~D---~~-~------v~~~i~---~~~~~~l~~l~~---n-- 174 (398)
....+....++++-.+.+-+.|=-.+...-++. ..+.. .+ . +...++ +.-++.+....- .
T Consensus 36 v~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~~~~i~ga~~~~~~v~~~A~~~~VPVaLHlDHg~~~~ 115 (358)
T 1dos_A 36 CVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKL 115 (358)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHHHhcCCCccccchhhhHHHhHHHHHHHHHHHHHHCCCCEEEECCCCCCcc
Confidence 567888888999999999997655432110010 00111 00 0 111222 112344444332 2
Q ss_pred HhhHHHHHHcC-----------CCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC-
Q 015894 175 LKGFEAAVAAG-----------AKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE- 242 (398)
Q Consensus 175 ~~~ie~a~~~G-----------v~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~- 242 (398)
++.++.++++| ...|.+= .|. .+.+|+++..++++++|++.|+.|++.|-..-|.+|.
T Consensus 116 ~~~i~~~i~a~~~~~~~~~~~gFtSVMiD--gS~--------~p~eENI~~Tkevv~~ah~~gvsVEaELG~vGG~EDgv 185 (358)
T 1dos_A 116 LPWIDGLLDAGEKHFAATGKPLFSSHMID--LSE--------ESLQENIEICSKYLERMSKIGMTLEIELGCTGGEEDGV 185 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSCSEEEEC--CTT--------SCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHhcccCCCceEeec--CCC--------CCHHHHHHHHHHHHHHHHHcCCEEEEEeccccCcCCCc
Confidence 24466665543 6776652 222 3678999999999999999999999888876554542
Q ss_pred ---------CCCCHHHHHHHHHHHHhCCCC-EEEEccCcCc-----------CCHHHHHHHHHHHHhhC--C--CCeEEE
Q 015894 243 ---------GMVPPSKVAYVSKQLYDMGCS-EISLGDTIGV-----------GTPGTVIPMLEAVLDAV--P--VDKLAV 297 (398)
Q Consensus 243 ---------~r~~~~~l~~~a~~l~~~Gad-~I~L~DT~G~-----------~~P~~v~~lv~~l~~~~--p--~~~l~~ 297 (398)
-.++|+...++++++- |+| ...|+=++|. +.|..+.++=+.+++.+ | .+||.+
T Consensus 186 ~~~~~~~~~~yT~Peea~~fv~~tt--gvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~g~~~~~vpLVl 263 (358)
T 1dos_A 186 DNSHMDASALYTQPEDVDYAYTELS--KISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVF 263 (358)
T ss_dssp SCCCCCCCCCSCCHHHHHHHHHHHH--TTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHHHHHHHHTCCTTCSCEEE
T ss_pred cccccccccccCCHHHHHHHHHHhc--CCChhceEEEecccccCccCCCCCCcCHHHHHHHHHHHHHHhCCCCCCCcEEE
Confidence 1388999888887542 444 2233333332 23444444444444332 3 257887
Q ss_pred EeCCccchHHHHHHHHHHhCCCEEee
Q 015894 298 HFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 298 H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
|+= -|........|+..|+.-|+.
T Consensus 264 HGg--SG~~~e~i~~ai~~GV~KiNi 287 (358)
T 1dos_A 264 HGG--SGSTAQEIKDSVSYGVVKMNI 287 (358)
T ss_dssp CSC--TTCCHHHHHHHHHTTEEEEEE
T ss_pred eCC--CCCCHHHHHHHHHCCCeEEEE
Confidence 774 488888899999999876543
No 194
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=90.97 E-value=5.9 Score=38.48 Aligned_cols=147 Identities=14% Similarity=0.046 Sum_probs=93.8
Q ss_pred CcEEEEe-CCHhhHHHHHHcCCCEEEEec-cCc-hHHHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC
Q 015894 166 ARFPVLT-PNLKGFEAAVAAGAKEVAIFA-SAS-ESFSKSN-INCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV 241 (398)
Q Consensus 166 ~~l~~l~-~n~~~ie~a~~~Gv~~v~i~~-~~S-d~~~~~~-~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~ 241 (398)
-.+.++. .+.-..+.+.++|++.|.+.. +++ -.+-..- .-.|.++.+..++.+.+.++ .+.|.+.+ |.
T Consensus 39 ~~i~~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~--~~PviaD~------d~ 110 (318)
T 1zlp_A 39 GSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAP--NLCVVVDG------DT 110 (318)
T ss_dssp SSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSS--SSEEEEEC------TT
T ss_pred CcEEEecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhcc--CCCEEEeC------CC
Confidence 3455554 355455666779999998865 233 1111111 23578888888877766543 45554322 33
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEccCcC-----------cCCHHHHHHHHHHHHhhC--CCCeEEEEeCCcc----c
Q 015894 242 EGMVPPSKVAYVSKQLYDMGCSEISLGDTIG-----------VGTPGTVIPMLEAVLDAV--PVDKLAVHFHDTY----G 304 (398)
Q Consensus 242 ~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~--p~~~l~~H~Hnd~----G 304 (398)
..- +++.+.+.++++.++|+..|.|-|..+ +....+..+.|+++++.. ++..|---+-... -
T Consensus 111 Gyg-~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~ 189 (318)
T 1zlp_A 111 GGG-GPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLE 189 (318)
T ss_dssp CSS-SHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHH
T ss_pred CCC-CHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHH
Confidence 322 788899999999999999999999974 333455667788887664 4433333332211 2
Q ss_pred hHHHHHHHHHHhCCCEE
Q 015894 305 QALSNILASLQMGISTV 321 (398)
Q Consensus 305 lA~ANalaAl~aGa~~V 321 (398)
-++.-+.+-.+|||+.|
T Consensus 190 ~ai~Ra~Ay~eAGAd~i 206 (318)
T 1zlp_A 190 EGIRRANLYKEAGADAT 206 (318)
T ss_dssp HHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHcCCCEE
Confidence 47888889999999955
No 195
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=90.89 E-value=0.84 Score=45.45 Aligned_cols=68 Identities=12% Similarity=0.207 Sum_probs=52.1
Q ss_pred HHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEE-EeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 251 AYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAV-HFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 251 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~-H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
.+.++.+.+.|++.|.| ++ +...|..+.++++.+++.+|+.+|.+ ..++ ..-+..+.++|++.|.++.
T Consensus 155 ~~~a~~~~~~G~d~i~i-~~-~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~-----~~~a~~a~~~Gad~I~vg~ 223 (404)
T 1eep_A 155 IERVEELVKAHVDILVI-DS-AHGHSTRIIELIKKIKTKYPNLDLIAGNIVT-----KEAALDLISVGADCLKVGI 223 (404)
T ss_dssp HHHHHHHHHTTCSEEEE-CC-SCCSSHHHHHHHHHHHHHCTTCEEEEEEECS-----HHHHHHHHTTTCSEEEECS
T ss_pred HHHHHHHHHCCCCEEEE-eC-CCCChHHHHHHHHHHHHHCCCCeEEEcCCCc-----HHHHHHHHhcCCCEEEECC
Confidence 44566788899999988 32 34578889999999999997778876 3332 4566788899999999953
No 196
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=90.84 E-value=12 Score=35.86 Aligned_cols=182 Identities=12% Similarity=0.091 Sum_probs=105.0
Q ss_pred CCHHHHHHHHHHHHhcC----CCEEEEecCCC-CCccc-CCC--CHHHHHHHHHhc---cCCcEEEEeCCHhhHHHHHHc
Q 015894 116 VPAVVKVELIKLLVSSG----LAVVEATSFVS-PKWVP-QLA--DAKDVMAAIQNV---EGARFPVLTPNLKGFEAAVAA 184 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aG----v~~IEvG~~~~-~~~~p-~~~--D~~~v~~~i~~~---~~~~l~~l~~n~~~ie~a~~~ 184 (398)
=+.+.-+++++.|.++| ...+=-.+|-- |+--| .+. ..++-++.+++. .++.+..=......++.+.+
T Consensus 29 ~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~sf~g~~l~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~- 107 (292)
T 1o60_A 29 ESRDMAMQVCEAYVKVTEKLGVPYVFKASFDKANRSSIHSYRGPGMEEGLKIFQELKDTFGVKIITDVHEIYQCQPVAD- 107 (292)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHT-
T ss_pred cCHHHHHHHHHHHHHHhhhhCEeEEEhhhcccCCCCChHHhhhhhHHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHh-
Confidence 37888899999998876 33332223321 21111 111 223334444432 24443333346777877777
Q ss_pred CCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHhCCCC
Q 015894 185 GAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGM-VPPSKVAYVSKQLYDMGCS 263 (398)
Q Consensus 185 Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r-~~~~~l~~~a~~l~~~Gad 263 (398)
.++.+.|-.. + +..- ++++++.+.|.+|. +. .+. .+++.+...++.+...|.+
T Consensus 108 ~vd~~kIgA~--~--------~~n~-------~Ll~~~a~~~kPV~--lk-------~G~~~t~~ei~~Av~~i~~~Gn~ 161 (292)
T 1o60_A 108 VVDIIQLPAF--L--------ARQT-------DLVEAMAKTGAVIN--VK-------KPQFLSPSQMGNIVEKIEECGND 161 (292)
T ss_dssp TCSEEEECGG--G--------TTCH-------HHHHHHHHTTCEEE--EE-------CCTTSCGGGHHHHHHHHHHTTCC
T ss_pred cCCEEEECcc--c--------ccCH-------HHHHHHHcCCCcEE--Ee-------CCCCCCHHHHHHHHHHHHHcCCC
Confidence 7898888532 1 1111 13444456788875 33 122 3678888888888899987
Q ss_pred EEEEccCcCcCC-H---HHHHHHHHHHHhhCCCCeEEE---Ee-----------CCccchHHHHHHHHHHhCCC--EEee
Q 015894 264 EISLGDTIGVGT-P---GTVIPMLEAVLDAVPVDKLAV---HF-----------HDTYGQALSNILASLQMGIS--TVDS 323 (398)
Q Consensus 264 ~I~L~DT~G~~~-P---~~v~~lv~~l~~~~p~~~l~~---H~-----------Hnd~GlA~ANalaAl~aGa~--~VD~ 323 (398)
.+.|+--.+... + ..+.. +..+++.++..||++ |. -....+...-+.+|+.+||+ +|+.
T Consensus 162 ~i~L~~rg~~~~y~~~~~dl~~-i~~lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~ 240 (292)
T 1o60_A 162 KIILCDRGTNFGYDNLIVDMLG-FSVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEA 240 (292)
T ss_dssp CEEEEECCEECSTTCEECCTTH-HHHHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEE
T ss_pred eEEEEECCCCCCCCccccCHHH-HHHHHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEe
Confidence 666665433221 1 13444 346788876678999 65 33334456777889999999 8876
Q ss_pred cc
Q 015894 324 SV 325 (398)
Q Consensus 324 Sv 325 (398)
=+
T Consensus 241 H~ 242 (292)
T 1o60_A 241 HP 242 (292)
T ss_dssp ES
T ss_pred cC
Confidence 65
No 197
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=90.82 E-value=4.4 Score=39.62 Aligned_cols=135 Identities=19% Similarity=0.079 Sum_probs=84.3
Q ss_pred HHHHHcCCCEEEEecc--------CchH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-C--CcEEEEEeeeecCCCCCCC
Q 015894 179 EAAVAAGAKEVAIFAS--------ASES--FSKSNINCTIEDSLIRYRDVALAAREL-S--IPVRGYLSCVVGCPVEGMV 245 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~--------~Sd~--~~~~~~~~s~~~~l~~~~~~v~~ak~~-G--~~v~~~l~~~fg~~~~~r~ 245 (398)
++|.++|.|.|-|-.. .|+. +....+|-+.+.-.+.+.++++.+|+. | +.|.+-++..- . ..+..
T Consensus 150 ~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~-~-~~~g~ 227 (343)
T 3kru_A 150 KRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADD-Y-MEGGI 227 (343)
T ss_dssp HHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCC-S-STTSC
T ss_pred hhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechh-h-hccCc
Confidence 4567899999888531 2222 233455667787788888999998876 3 45665566321 1 11235
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcc--CcCc---CCHHHHHHHHHHHHhhCCCCeEEEEeC-CccchHHHHHHHHHHhC-C
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGD--TIGV---GTPGTVIPMLEAVLDAVPVDKLAVHFH-DTYGQALSNILASLQMG-I 318 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~D--T~G~---~~P~~v~~lv~~l~~~~p~~~l~~H~H-nd~GlA~ANalaAl~aG-a 318 (398)
+.+...++++.+.++ +|.|.+.. +... ..|..-.++++.+++.++ +||..=+- ++ ...+..+++.| |
T Consensus 228 ~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~Ggi~t----~e~Ae~~l~~G~a 301 (343)
T 3kru_A 228 NIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCN-IKTSAVGLITT----QELAEEILSNERA 301 (343)
T ss_dssp CHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT-CEEEEESSCCC----HHHHHHHHHTTSC
T ss_pred cHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcC-cccceeeeeeH----HHHHHHHHhchhh
Confidence 788999999999999 99988841 1110 123334567778887765 34443221 22 35566778888 7
Q ss_pred CEE
Q 015894 319 STV 321 (398)
Q Consensus 319 ~~V 321 (398)
|.|
T Consensus 302 D~V 304 (343)
T 3kru_A 302 DLV 304 (343)
T ss_dssp SEE
T ss_pred HHH
Confidence 755
No 198
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=90.77 E-value=1.4 Score=44.61 Aligned_cols=199 Identities=14% Similarity=0.035 Sum_probs=113.6
Q ss_pred hHHHHHHcCCCEEEEeccCchH----HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEE-EEeeeecC------------
Q 015894 177 GFEAAVAAGAKEVAIFASASES----FSKSNINCTIEDSLIRYRDVALAARELSIPVRG-YLSCVVGC------------ 239 (398)
Q Consensus 177 ~ie~a~~~Gv~~v~i~~~~Sd~----~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~-~l~~~fg~------------ 239 (398)
-++...++|+-.|+|-+.+... |...+-=.+.++..++++.+...+...|..+.+ .=+.+.+.
T Consensus 165 tVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s~~d~rd~ 244 (433)
T 3eol_A 165 IMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTSDIDERDQ 244 (433)
T ss_dssp HHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCSTTTG
T ss_pred HHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCccccccccCcccccc
Confidence 4677789999999999887521 111111237899999998777776666654321 01111000
Q ss_pred ----CCCC---------CCCHHHHHHHHHHHHhCCCCEEEE-ccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccch
Q 015894 240 ----PVEG---------MVPPSKVAYVSKQLYDMGCSEISL-GDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQ 305 (398)
Q Consensus 240 ----~~~~---------r~~~~~l~~~a~~l~~~Gad~I~L-~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~Gl 305 (398)
.+.. +...+..++=++...+ |||.|.+ + |.-+++++..+.+.++..+|...+.+-+--.+..
T Consensus 245 ~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~e~---~~~~~eei~~f~~~v~~~~P~~~L~~~~sPsfnw 320 (433)
T 3eol_A 245 PFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWMET---SKPDLAQARRFAEAVHKAHPGKLLAYNCSPSFNW 320 (433)
T ss_dssp GGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEECC---SSCCHHHHHHHHHHHHHHSTTCCEEEECCSSSCH
T ss_pred cceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEEeC---CCCCHHHHHHHHHHhcccCCCcccccCCCCCCcc
Confidence 0000 1235566665666666 9999987 3 3458999999999999888865565532222221
Q ss_pred ----H---HHH-HHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCCccChHHHHHHHHHHHHHhCC
Q 015894 306 ----A---LSN-ILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGR 377 (398)
Q Consensus 306 ----A---~AN-alaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~t~iDl~~L~~~~~~v~~~~g~ 377 (398)
. +.+ .-.--++|+.+|-.++.++ ++-+.++.++...+.+.|-...++ | +--++..+..|+
T Consensus 321 ~~~~~~~~~~~f~~eLa~lGv~~v~~~~a~~--------raa~~A~~~~a~~i~~~G~~ayve---~-Q~~e~~~~~~g~ 388 (433)
T 3eol_A 321 KKNLDDATIAKFQRELGAMGYKFQFITLAGF--------HQLNYGMFELARGYKDRQMAAYSE---L-QQAEFAAEADGY 388 (433)
T ss_dssp HHHSCHHHHHHHHHHHHHHTEEEEEETTHHH--------HHHHHHHHHHHHHHHHHTHHHHHH---H-HHHHHHHGGGTC
T ss_pred cccCChhHHhHHHHHHHHcCCeEEEeCcHHH--------HHHHHHHHHHHHHHHHcCCHHHHH---H-HHHhhhhhccCc
Confidence 1 111 1223358999999988887 777888999988887655322222 1 112222345677
Q ss_pred CCCCCccccccccc
Q 015894 378 TSGSKTAIALSKTS 391 (398)
Q Consensus 378 ~~~~~~pivG~~~f 391 (398)
..-.+.--+|.+-|
T Consensus 389 ~~~~hq~~~g~~y~ 402 (433)
T 3eol_A 389 TATKHQREVGTGYF 402 (433)
T ss_dssp CCC--------CHH
T ss_pred eeeecccccccchH
Confidence 66666656665543
No 199
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=90.77 E-value=3.6 Score=40.06 Aligned_cols=118 Identities=16% Similarity=0.157 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeeeecC----------CCC------C----CCCH-------HHHHHHHHHHHhCCC
Q 015894 210 DSLIRYRDVALAARELSIPVRGYLSCVVGC----------PVE------G----MVPP-------SKVAYVSKQLYDMGC 262 (398)
Q Consensus 210 ~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~----------~~~------~----r~~~-------~~l~~~a~~l~~~Ga 262 (398)
+.++..+++++.+++.|-.+...|... |- |-. . ..+. +.+.+.++.+.++|.
T Consensus 80 ~~i~~~~~~~~~vh~~G~~i~~QL~H~-Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGf 158 (340)
T 3gr7_A 80 DHIAGLRELVGLVKEHGAAIGIQLAHA-GRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGF 158 (340)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEeccC-CCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 556778888999999999888777653 10 000 0 1222 345556777778899
Q ss_pred CEEEEc-------------------cCcCcCC---HHHHHHHHHHHHhhCCCCeEEEEeCC--------ccchHHHHHHH
Q 015894 263 SEISLG-------------------DTIGVGT---PGTVIPMLEAVLDAVPVDKLAVHFHD--------TYGQALSNILA 312 (398)
Q Consensus 263 d~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p~~~l~~H~Hn--------d~GlA~ANala 312 (398)
|.|-|- |-.|... +.-+.++++++|+.+ +.+|.+-..- +....+.-+..
T Consensus 159 DgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls~~~~~~~g~~~~~~~~la~~ 237 (340)
T 3gr7_A 159 DVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRISASDYHPDGLTAKDYVPYAKR 237 (340)
T ss_dssp SEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEESCCCSTTSCCGGGHHHHHHH
T ss_pred CEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEeccccccCCCCCHHHHHHHHHH
Confidence 987663 4455432 344788999999988 5577776653 23445555555
Q ss_pred HHHhCCCEEeeccccCC
Q 015894 313 SLQMGISTVDSSVSGLG 329 (398)
Q Consensus 313 Al~aGa~~VD~Sv~GlG 329 (398)
.-++|++.|+++..+..
T Consensus 238 L~~~Gvd~i~vs~g~~~ 254 (340)
T 3gr7_A 238 MKEQGVDLVDVSSGAIV 254 (340)
T ss_dssp HHHTTCCEEEEECCCSS
T ss_pred HHHcCCCEEEEecCCcc
Confidence 56799999999875443
No 200
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=90.69 E-value=2.9 Score=41.33 Aligned_cols=120 Identities=10% Similarity=0.116 Sum_probs=78.1
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC---------------CCC---------------CCCCH--------
Q 015894 206 CTIEDSLIRYRDVALAARELSIPVRGYLSCVVGC---------------PVE---------------GMVPP-------- 247 (398)
Q Consensus 206 ~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~---------------~~~---------------~r~~~-------- 247 (398)
...++.++..+.+++.+++.|-.+.+.|... |- |-. ....|
T Consensus 84 i~~d~~i~~~k~l~~avh~~G~~i~~QL~H~-Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI 162 (376)
T 1icp_A 84 IWTKEQVEAWKPIVDAVHAKGGIFFCQIWHV-GRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEI 162 (376)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTCEEEEEEECC-TTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTH
T ss_pred cCCHHHHHHHHHHHHHHHhcCCeEEEEeecC-CCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHH
Confidence 3345667788888888999998887777652 10 000 00122
Q ss_pred ----HHHHHHHHHHHhCCCCEEEEc-------------------cCcCcCC---HHHHHHHHHHHHhhCCCCeEEEEeCC
Q 015894 248 ----SKVAYVSKQLYDMGCSEISLG-------------------DTIGVGT---PGTVIPMLEAVLDAVPVDKLAVHFHD 301 (398)
Q Consensus 248 ----~~l~~~a~~l~~~Gad~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p~~~l~~H~Hn 301 (398)
+.+.+.++.+.++|.|.|-|- |-.|... +..+.++|+++|+.++..+|.+-++-
T Consensus 163 ~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~ 242 (376)
T 1icp_A 163 PQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISP 242 (376)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEecc
Confidence 567778888899999987762 4455432 34578889999998863278877763
Q ss_pred c-------cch----HHHHHHHHHHhCCCEEeeccc
Q 015894 302 T-------YGQ----ALSNILASLQMGISTVDSSVS 326 (398)
Q Consensus 302 d-------~Gl----A~ANalaAl~aGa~~VD~Sv~ 326 (398)
+ .+. ++.-+.+.-++|++.|+.+..
T Consensus 243 ~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 243 FAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp TCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECC
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 2 122 333344444789999999764
No 201
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=90.67 E-value=6.2 Score=38.01 Aligned_cols=154 Identities=16% Similarity=0.151 Sum_probs=87.9
Q ss_pred HHHHHHHHhcCC-CEEEEecCCCCCcccCCCCHHHH---HHHHHhccCCcEEE--Ee--CC-HhhHHHHHHcCCCEEEEe
Q 015894 122 VELIKLLVSSGL-AVVEATSFVSPKWVPQLADAKDV---MAAIQNVEGARFPV--LT--PN-LKGFEAAVAAGAKEVAIF 192 (398)
Q Consensus 122 ~~ia~~L~~aGv-~~IEvG~~~~~~~~p~~~D~~~v---~~~i~~~~~~~l~~--l~--~n-~~~ie~a~~~Gv~~v~i~ 192 (398)
.+++....++|. ..|..++. +++++ ++.+++..+..+.+ +. +. .+.++.+.+.|++.|.+.
T Consensus 26 ~~la~av~~aG~lG~i~~~~~----------~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~ 95 (332)
T 2z6i_A 26 GDLAGAVSKAGGLGIIGGGNA----------PKEVVKANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTG 95 (332)
T ss_dssp HHHHHHHHHHTSBEEEECTTC----------CHHHHHHHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhCCCcEEeCCCCC----------CHHHHHHHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEEC
Confidence 457777888885 56654431 23333 33444333333332 33 22 245788899999999885
Q ss_pred ccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcc--C
Q 015894 193 ASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGD--T 270 (398)
Q Consensus 193 ~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~D--T 270 (398)
... + .++++.+|+.|+.+.+.+ .+++ .++.+.+.|+|.|.+-. +
T Consensus 96 ~g~-p------------------~~~i~~l~~~g~~v~~~v-----------~~~~----~a~~~~~~GaD~i~v~g~~~ 141 (332)
T 2z6i_A 96 AGN-P------------------SKYMERFHEAGIIVIPVV-----------PSVA----LAKRMEKIGADAVIAEGMEA 141 (332)
T ss_dssp SSC-G------------------GGTHHHHHHTTCEEEEEE-----------SSHH----HHHHHHHTTCSCEEEECTTS
T ss_pred CCC-h------------------HHHHHHHHHcCCeEEEEe-----------CCHH----HHHHHHHcCCCEEEEECCCC
Confidence 542 1 123555667787765322 1333 35667789999988832 2
Q ss_pred cCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH-HHHHHHHHHhCCCEEeec
Q 015894 271 IGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA-LSNILASLQMGISTVDSS 324 (398)
Q Consensus 271 ~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA-~ANalaAl~aGa~~VD~S 324 (398)
-|...+.....++..+++.+. +|+-.=+ |.. ..++.+++.+||+.|...
T Consensus 142 GG~~g~~~~~~ll~~i~~~~~-iPViaaG----GI~~~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 142 GGHIGKLTTMTLVRQVATAIS-IPVIAAG----GIADGEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp SEECCSSCHHHHHHHHHHHCS-SCEEEES----SCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCccHHHHHHHHHHhcC-CCEEEEC----CCCCHHHHHHHHHcCCCEEEec
Confidence 222111123367777777653 3454432 343 467778888999988765
No 202
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=90.65 E-value=4.5 Score=36.94 Aligned_cols=199 Identities=12% Similarity=0.051 Sum_probs=99.9
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcc-cCCC--CHHHHHHHHHhccCCc---EEEEeC--------CH-----------h
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWV-PQLA--DAKDVMAAIQNVEGAR---FPVLTP--------NL-----------K 176 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~-p~~~--D~~~v~~~i~~~~~~~---l~~l~~--------n~-----------~ 176 (398)
.+.++.+.++|++.||+.......|. +.+. +.+++.+.+++ .+.+ +++..+ +. +
T Consensus 15 ~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~~~~ 93 (287)
T 2x7v_A 15 DRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKK-HGIDWENAFCHSGYLINLASPKDDIWQKSVELLKK 93 (287)
T ss_dssp GGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHH-HTCCGGGEEEECCTTCCTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHH-cCCCcceeEEecccccccCCCCHHHHHHHHHHHHH
Confidence 34667778899999999532111121 1111 22333333332 2444 444321 11 1
Q ss_pred hHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHh--CCCcEEEEEeeeecCCCCCCCCHHHHHHHH
Q 015894 177 GFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARE--LSIPVRGYLSCVVGCPVEGMVPPSKVAYVS 254 (398)
Q Consensus 177 ~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~--~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a 254 (398)
.++.|.+.|++.|.+..... .+.+.++.++++.+.++.+-+ .|+.+. +....+.+..--.+++.+.+++
T Consensus 94 ~i~~A~~lG~~~v~~~~g~~-------~~~~~~~~~~~~~~~l~~l~~~~~gv~l~--lEn~~~~~~~~~~~~~~~~~l~ 164 (287)
T 2x7v_A 94 EVEICRKLGIRYLNIHPGSH-------LGTGEEEGIDRIVRGLNEVLNNTEGVVIL--LENVSQKGGNIGYKLEQLKKIR 164 (287)
T ss_dssp HHHHHHHHTCCEEEECCEEC-------TTSCHHHHHHHHHHHHHHHHTTCCSCEEE--EECCCCCTTEECSSHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEecCCC-------CCCCHHHHHHHHHHHHHHHHcccCCCEEE--EeCCCCCCCccCCCHHHHHHHH
Confidence 24566778999887753311 122566677776666655433 455433 3321110000013566666665
Q ss_pred HHHHhCCC-CEEE-EccCc-----Cc--CCHHHHHHHHHHHHhhCC-CCeEEEEeCCccchHHHHHHHHHHhCCCEEeec
Q 015894 255 KQLYDMGC-SEIS-LGDTI-----GV--GTPGTVIPMLEAVLDAVP-VDKLAVHFHDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 255 ~~l~~~Ga-d~I~-L~DT~-----G~--~~P~~v~~lv~~l~~~~p-~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
+. .+- +.+. .-||. |. ..|..+.++++.+.+.++ +-..++|+||..+-- |-. -
T Consensus 165 ~~---~~~~~~vg~~~D~~h~~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~vH~~D~~~~~----------~~~-~--- 227 (287)
T 2x7v_A 165 DL---VDQRDRVAITYDTCHGFDSGYDITKKEGVEALLNEIESLFGLERLKMIHLNDSKYPL----------GAA-K--- 227 (287)
T ss_dssp HH---CSCGGGEEEEEEHHHHHHTTCCTTSHHHHHHHHHHHHHHTCGGGEEEEEECEESSCT----------TCC-C---
T ss_pred Hh---cCCCCCeEEEEEhhhHHHcCCCCCchHHHHHHHHHHHHhcCccceeEEEEecCCCcc----------CCc-c---
Confidence 43 342 3222 22542 21 224467777777766553 445788999876520 110 0
Q ss_pred cccCCCCCCCCCCCCCccHHHHHHHHHhC
Q 015894 325 VSGLGGCPYAKGASGNVATEDVVYMLNGL 353 (398)
Q Consensus 325 v~GlGecp~a~graGNa~lE~vv~~L~~~ 353 (398)
.. -..+ +.|..+.+.++..|++.
T Consensus 228 ----~~-~~~~-G~G~id~~~~~~~L~~~ 250 (287)
T 2x7v_A 228 ----DR-HERI-GSGFIGEEGFAVFFSFK 250 (287)
T ss_dssp ----CC-EECT-TSSSSHHHHHHHHHTCH
T ss_pred ----cc-cCCC-CCCCcCHHHHHHHHhcc
Confidence 00 0012 35789999999999853
No 203
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=90.65 E-value=1.6 Score=42.02 Aligned_cols=98 Identities=10% Similarity=0.149 Sum_probs=79.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCCCCeEEEEe-CCccchHHHHHHHHHHhCC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVPVDKLAVHF-HDTYGQALSNILASLQMGI 318 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~l~~H~-Hnd~GlA~ANalaAl~aGa 318 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|= ++.++-.++++.+.+....++|-++. +|+..-++..+..|-++||
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga 103 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGA 103 (313)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999995 77888888898888776556777776 7899999999999999999
Q ss_pred CEEeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q 015894 319 STVDSSVSGLGGCPYAKGASGNVATEDVVYMLN 351 (398)
Q Consensus 319 ~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~ 351 (398)
+.+=+ + .||. . ++-|+++..++
T Consensus 104 davlv-~-----~P~~--~---~s~~~l~~~f~ 125 (313)
T 3dz1_A 104 AGVMI-A-----PPPS--L---RTDEQITTYFR 125 (313)
T ss_dssp SEEEE-C-----CCTT--C---CSHHHHHHHHH
T ss_pred CEEEE-C-----CCCC--C---CCHHHHHHHHH
Confidence 98754 2 3441 1 34566666654
No 204
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=90.62 E-value=1.3 Score=42.17 Aligned_cols=82 Identities=11% Similarity=0.050 Sum_probs=69.6
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhC-CCCeEEEEe-CCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAV-PVDKLAVHF-HDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~l~~H~-Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|- ++.++-.++++.+.+.. +.+++-+|. +|+..-++..+..|-++|
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~G 96 (291)
T 3tak_A 17 GGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLG 96 (291)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999995 67888888888888765 345677765 689999999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 97 adavlv~ 103 (291)
T 3tak_A 97 ADAALLV 103 (291)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9977554
No 205
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=90.60 E-value=0.9 Score=44.26 Aligned_cols=74 Identities=18% Similarity=0.270 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcc-Cc--C--cCCHHHHH---HHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhC
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGD-TI--G--VGTPGTVI---PMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMG 317 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~D-T~--G--~~~P~~v~---~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aG 317 (398)
+.+..++.++++.+.|||.|-+.= +. | +-..+++. .+|+.+++.+|+++|.+- ++-- .-+.+|+++|
T Consensus 63 ~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISID---T~~~--~VaeaAl~aG 137 (318)
T 2vp8_A 63 SDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVD---TWRA--QVAKAACAAG 137 (318)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEE---CSCH--HHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEe---CCCH--HHHHHHHHhC
Confidence 678888899999999999998872 21 2 22234444 447888888878889884 4433 4456889999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
+++|+-.
T Consensus 138 a~iINDV 144 (318)
T 2vp8_A 138 ADLINDT 144 (318)
T ss_dssp CCEEEET
T ss_pred CCEEEEC
Confidence 9999643
No 206
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=90.60 E-value=4.9 Score=37.91 Aligned_cols=135 Identities=12% Similarity=0.056 Sum_probs=82.2
Q ss_pred EeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCC--CCe----EEEEeCCcc
Q 015894 233 LSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVP--VDK----LAVHFHDTY 303 (398)
Q Consensus 233 l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p--~~~----l~~H~Hnd~ 303 (398)
++.+.|.|.. ..+.+.-..-++.+.+.||+.|-+.=-.| ...-..+.+-+..+++..+ +.+ |+.-.=+|.
T Consensus 71 v~tVigFP~G-~~~~~~Kv~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~ 149 (260)
T 1p1x_A 71 IATVTNFPHG-NDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDE 149 (260)
T ss_dssp EEEEESTTTC-CSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSH
T ss_pred EEEEeCCCCC-CCcHHHHHHHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcH
Confidence 3344556754 44555444557788889999998877777 4445777777888777542 122 333333444
Q ss_pred chHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHh-----CCCCCc------cC-hHHHHHHHHHH
Q 015894 304 GQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNG-----LGVRTN------VD-IRKLMIAGDFI 371 (398)
Q Consensus 304 GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~-----~Gi~t~------iD-l~~L~~~~~~v 371 (398)
..=...+..|+++||++|=+|- |. .+|++..|++..+.+. .|-..+ |. .+...+..+..
T Consensus 150 e~i~~a~~ia~eaGADfVKTST-Gf--------~~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~ag 220 (260)
T 1p1x_A 150 ALIRKASEISIKAGADFIKTST-GK--------VAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIA 220 (260)
T ss_dssp HHHHHHHHHHHHTTCSEEECCC-SC--------SSCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEeCC-CC--------CCCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhh
Confidence 4334567788999999999986 22 3468888977766543 222222 22 44555555555
Q ss_pred HHHhCC
Q 015894 372 CKHLGR 377 (398)
Q Consensus 372 ~~~~g~ 377 (398)
.+++|-
T Consensus 221 a~~lG~ 226 (260)
T 1p1x_A 221 DELFGA 226 (260)
T ss_dssp HHHHCT
T ss_pred hhhccc
Confidence 555554
No 207
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=90.56 E-value=5.9 Score=38.44 Aligned_cols=205 Identities=12% Similarity=0.112 Sum_probs=117.5
Q ss_pred HHHHHHhcCCCEEEEecC-C------CCCcccCCCCHHHHHHHHHhcc-CC-cEEEEe--C----CH----hhHHHHHHc
Q 015894 124 LIKLLVSSGLAVVEATSF-V------SPKWVPQLADAKDVMAAIQNVE-GA-RFPVLT--P----NL----KGFEAAVAA 184 (398)
Q Consensus 124 ia~~L~~aGv~~IEvG~~-~------~~~~~p~~~D~~~v~~~i~~~~-~~-~l~~l~--~----n~----~~ie~a~~~ 184 (398)
-++.++++|++.|=+|.. . .|+.. .-+.++++..++.+. .+ .+.+++ + +. +-+++..++
T Consensus 51 sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~--~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~a 128 (318)
T 1zlp_A 51 SAAVVEKTGFHAAFVSGYSVSAAMLGLPDFG--LLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELISA 128 (318)
T ss_dssp HHHHHHHTTCSEEEECHHHHHHHHHCCCSSS--CSCHHHHHHHHHHHHHHSSSSEEEEECTTCSSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEECcHHHhhHhcCCCCCC--CCCHHHHHHHHHHHHhhccCCCEEEeCCCCCCCHHHHHHHHHHHHHc
Confidence 356778899999999853 1 13322 235667766665432 12 233333 2 22 235566789
Q ss_pred CCCEEEEeccCchH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCC-CCCHHHHHHHHHHHHhC
Q 015894 185 GAKEVAIFASASES---FSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEG-MVPPSKVAYVSKQLYDM 260 (398)
Q Consensus 185 Gv~~v~i~~~~Sd~---~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~-r~~~~~l~~~a~~l~~~ 260 (398)
|+.-|+|-..+.+- |..-+-=.+.++..++++.+++....-++.+.+-- ++. ....+..++-++.+.++
T Consensus 129 Gaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARt-------da~a~~gl~~ai~Ra~Ay~eA 201 (318)
T 1zlp_A 129 GAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVART-------DARAPHGLEEGIRRANLYKEA 201 (318)
T ss_dssp TCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEE-------CTHHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEee-------HHhhhcCHHHHHHHHHHHHHc
Confidence 99999998876421 11000013567777887666665544455554211 110 01124666677788899
Q ss_pred CCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccch-HHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCC
Q 015894 261 GCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQ-ALSNILASLQMGISTVDSSVSGLGGCPYAKGASG 339 (398)
Q Consensus 261 Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~Gl-A~ANalaAl~aGa~~VD~Sv~GlGecp~a~graG 339 (398)
|||.|.+. |.-+++.+.++.+.+ + +|+-+-.-. +|. ..-+.-.--++|+++|-....++ |+-
T Consensus 202 GAd~i~~e---~~~~~e~~~~i~~~l----~-~P~lan~~~-~g~~~~~~~~eL~~lGv~~v~~~~~~~--------raa 264 (318)
T 1zlp_A 202 GADATFVE---APANVDELKEVSAKT----K-GLRIANMIE-GGKTPLHTPEEFKEMGFHLIAHSLTAV--------YAT 264 (318)
T ss_dssp TCSEEEEC---CCCSHHHHHHHHHHS----C-SEEEEEECT-TSSSCCCCHHHHHHHTCCEEEECSHHH--------HHH
T ss_pred CCCEEEEc---CCCCHHHHHHHHHhc----C-CCEEEEecc-CCCCCCCCHHHHHHcCCeEEEEchHHH--------HHH
Confidence 99999986 334456666555544 3 344332211 111 01113344468999998877766 666
Q ss_pred CccHHHHHHHHHhCC
Q 015894 340 NVATEDVVYMLNGLG 354 (398)
Q Consensus 340 Na~lE~vv~~L~~~G 354 (398)
+.++++++..+++.|
T Consensus 265 ~~a~~~~~~~l~~~g 279 (318)
T 1zlp_A 265 ARALVNIMKILKEKG 279 (318)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcC
Confidence 888888888887644
No 208
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=90.53 E-value=1.6 Score=41.78 Aligned_cols=82 Identities=16% Similarity=0.061 Sum_probs=69.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhC-CCCeEEEEe-CCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAV-PVDKLAVHF-HDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~l~~H~-Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|- +++++-.++++.+.+.. ..+++-+|. +|+..-++..+..|-++|
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 102 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAG 102 (297)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999995 57788888888888765 345677765 689999999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 103 adavlv~ 109 (297)
T 3flu_A 103 ADYTLSV 109 (297)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9977554
No 209
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=90.50 E-value=3.9 Score=39.65 Aligned_cols=118 Identities=12% Similarity=0.135 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC----------CC----------CCCCCH-------HHHHHHHHHHHhC
Q 015894 208 IEDSLIRYRDVALAARELSIPVRGYLSCVVGC----------PV----------EGMVPP-------SKVAYVSKQLYDM 260 (398)
Q Consensus 208 ~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~----------~~----------~~r~~~-------~~l~~~a~~l~~~ 260 (398)
.++.++..+.+++.+++.|-.+.+.|... |- |- ....+. +.+.+.++.+.++
T Consensus 78 ~d~~~~~~~~~~~~vh~~g~~i~~QL~h~-Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~a 156 (338)
T 1z41_A 78 SDEHIEGFAKLTEQVKEQGSKIGIQLAHA-GRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEA 156 (338)
T ss_dssp STHHHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCC-CcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 34556777888888899998887777642 10 00 000111 4566778888899
Q ss_pred CCCEEEEc-------------------cCcCcCC---HHHHHHHHHHHHhhCCCCeEEEEeCC--------ccchHHHHH
Q 015894 261 GCSEISLG-------------------DTIGVGT---PGTVIPMLEAVLDAVPVDKLAVHFHD--------TYGQALSNI 310 (398)
Q Consensus 261 Gad~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p~~~l~~H~Hn--------d~GlA~ANa 310 (398)
|.|.|-|- |-.|... +..+.++++++++.+ +.+|.+..-- +...++.-+
T Consensus 157 GfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~~~~~g~~~~~~~~~a 235 (338)
T 1z41_A 157 GFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTDKGLDIADHIGFA 235 (338)
T ss_dssp TCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCSTTSCCHHHHHHHH
T ss_pred CCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCCCCCCHHHHHHHH
Confidence 99987653 3333322 455788999999988 5577776421 222334444
Q ss_pred HHHHHhCCCEEeecccc
Q 015894 311 LASLQMGISTVDSSVSG 327 (398)
Q Consensus 311 laAl~aGa~~VD~Sv~G 327 (398)
....++|++.|+++-..
T Consensus 236 ~~l~~~Gvd~i~v~~~~ 252 (338)
T 1z41_A 236 KWMKEQGVDLIDCSSGA 252 (338)
T ss_dssp HHHHHTTCCEEEEECCC
T ss_pred HHHHHcCCCEEEEecCc
Confidence 45557999999997643
No 210
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=90.48 E-value=2 Score=41.93 Aligned_cols=120 Identities=15% Similarity=0.188 Sum_probs=58.3
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc--cCcCcCC------HHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHH
Q 015894 244 MVPPSKVAYVSKQLYDMGCSEISLG--DTIGVGT------PGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315 (398)
Q Consensus 244 r~~~~~l~~~a~~l~~~Gad~I~L~--DT~G~~~------P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~ 315 (398)
+.+.+...++++.+.++|++.|-+. |-.+..+ .....++++.+++..|+.+|.+.+.-.+|. ....-.|.+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~-~~~i~~a~~ 104 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGS-VHDLKNAYQ 104 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBC-HHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCccc-HHHHHHHHh
Confidence 3456666666777766777766663 2111111 122344566666655665665553111221 234555666
Q ss_pred hCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCC--------CccChHHHHHHHHHHHHH
Q 015894 316 MGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVR--------TNVDIRKLMIAGDFICKH 374 (398)
Q Consensus 316 aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~--------t~iDl~~L~~~~~~v~~~ 374 (398)
+|++.|...+ .+.+ .-..++++.+.++.|++ +..+.+.+.++++.+.+.
T Consensus 105 aGvd~v~I~~-~~s~---------~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~ 161 (345)
T 1nvm_A 105 AGARVVRVAT-HCTE---------ADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESY 161 (345)
T ss_dssp HTCCEEEEEE-ETTC---------GGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHH
T ss_pred CCcCEEEEEE-eccH---------HHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHC
Confidence 6777665532 2211 11234555555544432 234455566665555544
No 211
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=90.43 E-value=2.4 Score=41.14 Aligned_cols=93 Identities=14% Similarity=0.100 Sum_probs=63.3
Q ss_pred HHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCC--CCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCe
Q 015894 217 DVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMG--CSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDK 294 (398)
Q Consensus 217 ~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~G--ad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~ 294 (398)
+.++.+++.|+.+.+. +| .+++. .+.++.+.+.| ++.|.+ |+ +...|....+.++.+++.+|..+
T Consensus 85 ~~i~~~~~~g~~v~v~----~g------~~~~~-~~~a~~~~~~g~~~~~i~i-~~-~~G~~~~~~~~i~~lr~~~~~~~ 151 (336)
T 1ypf_A 85 SFIRDMQSRGLIASIS----VG------VKEDE-YEFVQQLAAEHLTPEYITI-DI-AHGHSNAVINMIQHIKKHLPESF 151 (336)
T ss_dssp HHHHHHHHTTCCCEEE----EC------CSHHH-HHHHHHHHHTTCCCSEEEE-EC-SSCCSHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHhcCCeEEEe----CC------CCHHH-HHHHHHHHhcCCCCCEEEE-EC-CCCCcHHHHHHHHHHHHhCCCCE
Confidence 3456667778765433 22 12343 35577888999 888776 33 22378889999999999987644
Q ss_pred EEEEeCCccchHHHHHHHHHHhCCCEEeeccc
Q 015894 295 LAVHFHDTYGQALSNILASLQMGISTVDSSVS 326 (398)
Q Consensus 295 l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~ 326 (398)
+. .. ..+....+..|+++||+.|.++-.
T Consensus 152 vi-~G---~v~s~e~A~~a~~aGad~Ivvs~h 179 (336)
T 1ypf_A 152 VI-AG---NVGTPEAVRELENAGADATKVGIG 179 (336)
T ss_dssp EE-EE---EECSHHHHHHHHHHTCSEEEECSS
T ss_pred EE-EC---CcCCHHHHHHHHHcCCCEEEEecC
Confidence 44 32 124467889999999999999654
No 212
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=90.43 E-value=4.8 Score=38.59 Aligned_cols=179 Identities=11% Similarity=0.091 Sum_probs=103.4
Q ss_pred CHHHHHHHHHHHHhc----CCCEEEEecCCC-CCccc-CCC--CHHHHHHHHHhc---cCCcEEEEeCCHhhHHHHHHcC
Q 015894 117 PAVVKVELIKLLVSS----GLAVVEATSFVS-PKWVP-QLA--DAKDVMAAIQNV---EGARFPVLTPNLKGFEAAVAAG 185 (398)
Q Consensus 117 ~~~~k~~ia~~L~~a----Gv~~IEvG~~~~-~~~~p-~~~--D~~~v~~~i~~~---~~~~l~~l~~n~~~ie~a~~~G 185 (398)
+.++.+++|+.|.++ |+..+=-++|-- |+--| .+. ..++=++.+++. .+..+..=......++.+.+.
T Consensus 29 ~~~~~~e~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~- 107 (288)
T 3tml_A 29 SEQMTIDTAGRLKEICEKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASV- 107 (288)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECBC--------------CHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-
T ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh-
Confidence 688889999999876 877664444321 22111 011 112223334322 244433333467788888777
Q ss_pred CCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHhCCC--
Q 015894 186 AKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGM-VPPSKVAYVSKQLYDMGC-- 262 (398)
Q Consensus 186 v~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r-~~~~~l~~~a~~l~~~Ga-- 262 (398)
++.+.|-.. + +...+ .++++.+.|.+|- +. .+. .+++++...++.+.+.|.
T Consensus 108 vd~lkIgA~--~--------~~n~~-------LLr~~a~~gkPVi--lK-------~G~~~t~~e~~~ave~i~~~Gn~~ 161 (288)
T 3tml_A 108 VDVLQTPAF--L--------CRQTD-------FIHACARSGKPVN--IK-------KGQFLAPHDMKNVIDKARDAAREA 161 (288)
T ss_dssp CSEEEECGG--G--------TTCHH-------HHHHHHTSSSCEE--EE-------CCTTCCTTHHHHHHHHHHHHHHTT
T ss_pred CCEEEECcc--c--------ccCHH-------HHHHHHccCCcEE--Ee-------CCCCCCHHHHHHHHHHHHHcCCCc
Confidence 898888532 1 11111 2445557888875 33 123 478888888888888887
Q ss_pred ----CEEEEccCcCcCCHH----HHHHHHHHHHhhCCCCeEEE-EeCC-------------ccchHHHHHHHHHHhCCC-
Q 015894 263 ----SEISLGDTIGVGTPG----TVIPMLEAVLDAVPVDKLAV-HFHD-------------TYGQALSNILASLQMGIS- 319 (398)
Q Consensus 263 ----d~I~L~DT~G~~~P~----~v~~lv~~l~~~~p~~~l~~-H~Hn-------------d~GlA~ANalaAl~aGa~- 319 (398)
+.|.|+.-.-...+. .++. +..+++ + ..|+.+ +.|- +..+-..-++||+.+||+
T Consensus 162 ~~~~~~i~L~erg~~y~~~~~~vdl~~-i~~lk~-~-~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadG 238 (288)
T 3tml_A 162 GLSEDRFMACERGVSFGYNNLVSDMRS-LAIMRE-T-NAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAG 238 (288)
T ss_dssp TCCSCCEEEEECCEECSSSCEECCHHH-HHHGGG-G-SSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSE
T ss_pred cCCCCcEEEEeCCCCCCCCcCcCCHHH-HHHHHh-c-CCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCE
Confidence 777777632222222 2333 444565 4 567888 7774 233447789999999999
Q ss_pred -EEeecc
Q 015894 320 -TVDSSV 325 (398)
Q Consensus 320 -~VD~Sv 325 (398)
+|+.=.
T Consensus 239 l~iE~H~ 245 (288)
T 3tml_A 239 LFMETHP 245 (288)
T ss_dssp EEEEEES
T ss_pred EEEeecc
Confidence 775543
No 213
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=90.39 E-value=1.7 Score=40.14 Aligned_cols=68 Identities=18% Similarity=0.233 Sum_probs=52.1
Q ss_pred HHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCC
Q 015894 254 SKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLG 329 (398)
Q Consensus 254 a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlG 329 (398)
++++.++|+|.|.+ |+.....|..+.++++.+++. +..+..-+|+ ...+..|.++|+++|=+++.|+.
T Consensus 94 i~~~~~~Gad~V~l-~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~t 161 (232)
T 3igs_A 94 VDALAQAGAAIIAV-DGTARQRPVAVEALLARIHHH--HLLTMADCSS-----VDDGLACQRLGADIIGTTMSGYT 161 (232)
T ss_dssp HHHHHHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--TCEEEEECCS-----HHHHHHHHHTTCSEEECTTTTSS
T ss_pred HHHHHHcCCCEEEE-CccccCCHHHHHHHHHHHHHC--CCEEEEeCCC-----HHHHHHHHhCCCCEEEEcCccCC
Confidence 56678899998854 777777899999999999874 3456665664 46678899999999976676653
No 214
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=90.37 E-value=12 Score=35.35 Aligned_cols=158 Identities=13% Similarity=0.072 Sum_probs=91.1
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe----CCHhhHHHHHHcCCCEEEEeccC
Q 015894 120 VKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT----PNLKGFEAAVAAGAKEVAIFASA 195 (398)
Q Consensus 120 ~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~----~n~~~ie~a~~~Gv~~v~i~~~~ 195 (398)
+-.++++...+.|...|-+-- .+.+.. ... +.+..+++..+. .++. ....++..+.++|+|.|.+-...
T Consensus 80 dp~~~A~~y~~~GA~~IsVlt--d~~~f~--Gs~-~~L~~ir~~v~l--PVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~ 152 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLT--DTPSFQ--GAP-EFLTAARQACSL--PALRKDFLFDPYQVYEARSWGADCILIIMAS 152 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEEC--CSTTTC--CCH-HHHHHHHHTSSS--CEEEESCCCSTHHHHHHHHTTCSEEEEETTT
T ss_pred CHHHHHHHHHHCCCCEEEEec--cccccC--CCH-HHHHHHHHhcCC--CEEECCccCCHHHHHHHHHcCCCEEEEcccc
Confidence 347799999999999997732 111110 123 344555543333 3333 34557889999999999987653
Q ss_pred chHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcC-
Q 015894 196 SESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVG- 274 (398)
Q Consensus 196 Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~- 274 (398)
=+ -+.+.+++++++++|+.+-+.+ .+.+++ +++.++|++.|.+--.....
T Consensus 153 L~--------------~~~l~~l~~~a~~lGl~~lvev-----------h~~eEl----~~A~~~ga~iIGinnr~l~t~ 203 (272)
T 3tsm_A 153 VD--------------DDLAKELEDTAFALGMDALIEV-----------HDEAEM----ERALKLSSRLLGVNNRNLRSF 203 (272)
T ss_dssp SC--------------HHHHHHHHHHHHHTTCEEEEEE-----------CSHHHH----HHHTTSCCSEEEEECBCTTTC
T ss_pred cC--------------HHHHHHHHHHHHHcCCeEEEEe-----------CCHHHH----HHHHhcCCCEEEECCCCCccC
Confidence 11 1446678899999999875322 244443 44557999988776322111
Q ss_pred --CHHHHHHHHHHHHhhCC-CCeEEEEeCCccch-HHHHHHHHHHhCCCEE
Q 015894 275 --TPGTVIPMLEAVLDAVP-VDKLAVHFHDTYGQ-ALSNILASLQMGISTV 321 (398)
Q Consensus 275 --~P~~v~~lv~~l~~~~p-~~~l~~H~Hnd~Gl-A~ANalaAl~aGa~~V 321 (398)
.+....++ .+.+| +.++-.=. |. ....+..+.++|++.|
T Consensus 204 ~~dl~~~~~L----~~~ip~~~~vIaes----GI~t~edv~~l~~~Ga~gv 246 (272)
T 3tsm_A 204 EVNLAVSERL----AKMAPSDRLLVGES----GIFTHEDCLRLEKSGIGTF 246 (272)
T ss_dssp CBCTHHHHHH----HHHSCTTSEEEEES----SCCSHHHHHHHHTTTCCEE
T ss_pred CCChHHHHHH----HHhCCCCCcEEEEC----CCCCHHHHHHHHHcCCCEE
Confidence 22333333 34454 33333211 22 2345566677888754
No 215
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=90.36 E-value=0.71 Score=43.88 Aligned_cols=120 Identities=18% Similarity=0.245 Sum_probs=77.7
Q ss_pred HHHHHHHHHhc--cCCcEEEEe-CCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcE
Q 015894 153 AKDVMAAIQNV--EGARFPVLT-PNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPV 229 (398)
Q Consensus 153 ~~~v~~~i~~~--~~~~l~~l~-~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v 229 (398)
.+.+...++++ .+++++.++ +..+.++.|.+.|++.|-++.. .+.........++.|+++.+++++|+++|+.|
T Consensus 141 ~~~L~~~i~~L~~~GIrVSLFIDpd~~qI~aA~~~GAd~IELhTG---~YA~a~~~~~~~~el~rl~~aA~~A~~lGL~V 217 (278)
T 3gk0_A 141 FDAVRAACKQLADAGVRVSLFIDPDEAQIRAAHETGAPVIELHTG---RYADAHDAAEQQREFERIATGVDAGIALGLKV 217 (278)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHTCSEEEECCH---HHHTCSSHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCcCEEEEecc---hhhccCCchhHHHHHHHHHHHHHHHHHcCCEE
Confidence 44455555544 367777777 6788999999999999999754 12211101125568999999999999999998
Q ss_pred EEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE-----ccCcCcCCHHHHHHHHHHHHh
Q 015894 230 RGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL-----GDTIGVGTPGTVIPMLEAVLD 288 (398)
Q Consensus 230 ~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L-----~DT~G~~~P~~v~~lv~~l~~ 288 (398)
.+ | + -.+.+.+..+++ --+...++| ++.+=++.+..|+++.+.+++
T Consensus 218 nA------G---H-GL~y~Nv~~ia~---ip~i~ElnIGHaiIa~Al~~Gl~~AVr~mk~lm~~ 268 (278)
T 3gk0_A 218 NA------G---H-GLHYTNVQAIAA---LPGIAELNIGHAIVAHAVFVGWDNAVREMKAIMVA 268 (278)
T ss_dssp EE------C---T-TCCTTTHHHHHT---CTTEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ec------C---C-CCCHHHHHHHHh---CCCCeEEecCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 72 1 2 233344444421 124566666 555666677777777777654
No 216
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=90.30 E-value=7.4 Score=36.25 Aligned_cols=107 Identities=23% Similarity=0.313 Sum_probs=66.8
Q ss_pred eeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCCCCeEEE----EeCCccchH
Q 015894 234 SCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVPVDKLAV----HFHDTYGQA 306 (398)
Q Consensus 234 ~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~l~~----H~Hnd~GlA 306 (398)
+.+.|.|. +..+.+.-..-++.+.+.|||.|-+.=-+|. ..-..+.+-++.+++..++..+=+ -.=++- .=
T Consensus 82 ~tVigFP~-G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~e-ei 159 (239)
T 3ngj_A 82 CTVIGFPL-GATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNE-EK 159 (239)
T ss_dssp EEEESTTT-CCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHH-HH
T ss_pred EEEeccCC-CCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHH-HH
Confidence 33455674 4445555455577788899999988877776 445667778888887654322221 111222 22
Q ss_pred HHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q 015894 307 LSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLN 351 (398)
Q Consensus 307 ~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~ 351 (398)
...+..|.++||++|.+|-+ . .+|++..|++-.+.+
T Consensus 160 ~~a~~ia~~aGADfVKTSTG-f--------~~ggAt~~dv~lmr~ 195 (239)
T 3ngj_A 160 VEVCKRCVAAGAEYVKTSTG-F--------GTHGATPEDVKLMKD 195 (239)
T ss_dssp HHHHHHHHHHTCSEEECCCS-S--------SSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHCcCEEECCCC-C--------CCCCCCHHHHHHHHH
Confidence 33445568999999999853 2 245677888776664
No 217
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=90.25 E-value=6.6 Score=39.17 Aligned_cols=140 Identities=12% Similarity=0.038 Sum_probs=84.7
Q ss_pred HHHHHcCCCEEEEecc--------CchH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-C-CcEEEEEeeeecCC-CCCCC
Q 015894 179 EAAVAAGAKEVAIFAS--------ASES--FSKSNINCTIEDSLIRYRDVALAAREL-S-IPVRGYLSCVVGCP-VEGMV 245 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~--------~Sd~--~~~~~~~~s~~~~l~~~~~~v~~ak~~-G-~~v~~~l~~~fg~~-~~~r~ 245 (398)
++|.++|.|.|.|-.. +|+. .....+|-+.++-.+.+.++++.+|+. | ..|.+-++..-... .....
T Consensus 178 ~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~ 257 (402)
T 2hsa_B 178 LNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSN 257 (402)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSC
T ss_pred HHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Confidence 4567899999988653 1232 233445667777777788888888764 4 25555455310000 01223
Q ss_pred CHHHHHHHHHHHHhCC------CCEEEEccCc--C-cCCH-------HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHH
Q 015894 246 PPSKVAYVSKQLYDMG------CSEISLGDTI--G-VGTP-------GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSN 309 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~G------ad~I~L~DT~--G-~~~P-------~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~AN 309 (398)
+.+...++++.+.++| ++.|.+..-. + ...| ..-.++++.+++.++. ||..=+- . -...
T Consensus 258 ~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~i-Pvi~~G~--i--~~~~ 332 (402)
T 2hsa_B 258 PLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQG-TFICSGG--Y--TREL 332 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSS-CEEEESS--C--CHHH
T ss_pred CHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCC-CEEEeCC--C--CHHH
Confidence 5678899999999999 9988884311 0 0112 1235678888888754 4433221 1 2466
Q ss_pred HHHHHHhC-CCEEee
Q 015894 310 ILASLQMG-ISTVDS 323 (398)
Q Consensus 310 alaAl~aG-a~~VD~ 323 (398)
+..+++.| ||.|-.
T Consensus 333 a~~~l~~g~aD~V~i 347 (402)
T 2hsa_B 333 GIEAVAQGDADLVSY 347 (402)
T ss_dssp HHHHHHTTSCSEEEE
T ss_pred HHHHHHCCCCceeee
Confidence 77888888 887643
No 218
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=90.18 E-value=5.7 Score=40.27 Aligned_cols=167 Identities=11% Similarity=0.011 Sum_probs=104.5
Q ss_pred hHHHHHHcCCCEEEEeccCchH----HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEE-EEeeeecC----CCC-----
Q 015894 177 GFEAAVAAGAKEVAIFASASES----FSKSNINCTIEDSLIRYRDVALAARELSIPVRG-YLSCVVGC----PVE----- 242 (398)
Q Consensus 177 ~ie~a~~~Gv~~v~i~~~~Sd~----~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~-~l~~~fg~----~~~----- 242 (398)
-++..+++|+-.|+|-+.+... |...+-=.+.++..++++.+...++..|..+.+ .=+.+.+. .+.
T Consensus 172 ~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~~d~~d~ 251 (439)
T 3i4e_A 172 LMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSDIDDNDK 251 (439)
T ss_dssp HHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCTTTG
T ss_pred HHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCcccccccccccccccc
Confidence 3567789999999999887531 111112247899999998777777667765321 01111000 000
Q ss_pred --------------CCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccc----
Q 015894 243 --------------GMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYG---- 304 (398)
Q Consensus 243 --------------~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~G---- 304 (398)
.+...+..++=++...+ |||.|.+- .|.-+++++..+.+.++..+|...+.+-+--.+.
T Consensus 252 ~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E--~~~~~~eei~~f~~~v~~~~P~~~l~~~~sPsfnw~~~ 328 (439)
T 3i4e_A 252 PYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCE--TGKPDLEYAKKFAEAIHKQFPGKLLSYNCSPSFNWKKN 328 (439)
T ss_dssp GGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEEC--CSSCCHHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHH
T ss_pred hhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEec--CCCCCHHHHHHHHHHhcccCCceEEeeCCCCCCcCccc
Confidence 01235555555665566 99999871 2456899999999999988886555543222222
Q ss_pred hH---HHH-HHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCC
Q 015894 305 QA---LSN-ILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLG 354 (398)
Q Consensus 305 lA---~AN-alaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~G 354 (398)
+. +++ .-.--++|+.++=.++.|+ ++-+.+++++...+.+.|
T Consensus 329 ~~~~~~~~f~~eL~~lGv~~v~~~la~~--------raa~~A~~~~a~~i~~~G 374 (439)
T 3i4e_A 329 LDDATIAKFQKELGAMGYKFQFITLAGF--------HALNYSMFNLAHGYARTQ 374 (439)
T ss_dssp SCHHHHHTHHHHHHHHTCCEEEETTHHH--------HHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCeEEEeChHHH--------HHHHHHHHHHHHHHHHhC
Confidence 11 111 1223358999999999888 777888888888776644
No 219
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=90.11 E-value=13 Score=35.29 Aligned_cols=123 Identities=15% Similarity=0.131 Sum_probs=76.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCc-CcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHH-HHHhCCCEEe
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTI-GVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILA-SLQMGISTVD 322 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~-G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANala-Al~aGa~~VD 322 (398)
.+++.+.+.++.+.+.|+..|.|.+-- -.+.+..+.++++.+++. + +.+++++ |+-....+. -.++|++.+.
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~--~--~~i~~s~--g~l~~e~l~~L~~ag~~~v~ 157 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKM--G--VAVTLSL--GEWPREYYEKWKEAGADRYL 157 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTT--S--CEEEEEC--CCCCHHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhc--C--ceEEEec--CCCCHHHHHHHHHhCCCEEe
Confidence 478999999999999999999995432 223347888999998876 3 4444433 333333444 4468999999
Q ss_pred eccccCCCCCCCCCCCCCccHHHHHHHHH---hCCCCC---------ccChHHHHHHHHHHHHH
Q 015894 323 SSVSGLGGCPYAKGASGNVATEDVVYMLN---GLGVRT---------NVDIRKLMIAGDFICKH 374 (398)
Q Consensus 323 ~Sv~GlGecp~a~graGNa~lE~vv~~L~---~~Gi~t---------~iDl~~L~~~~~~v~~~ 374 (398)
.++-+.-.=-+.. -.+..+.++++..++ +.|+.. +-+.+.+.++.+++.+.
T Consensus 158 i~let~~~~~~~~-i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~~~~~l~~l 220 (348)
T 3iix_A 158 LRHETANPVLHRK-LRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEH 220 (348)
T ss_dssp CCCBCSCHHHHHH-HSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHHHHHHHH
T ss_pred eeeeeCCHHHHHH-hCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHHHHHHHHhc
Confidence 8887763100000 011126677666654 456542 23556777777777665
No 220
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=90.08 E-value=4.5 Score=38.30 Aligned_cols=135 Identities=9% Similarity=-0.027 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeee-ecCCCCCCCC-------------H-------HHHHHHHHHHHhCCCCEEE
Q 015894 208 IEDSLIRYRDVALAARELSIPVRGYLSCV-VGCPVEGMVP-------------P-------SKVAYVSKQLYDMGCSEIS 266 (398)
Q Consensus 208 ~~~~l~~~~~~v~~ak~~G~~v~~~l~~~-fg~~~~~r~~-------------~-------~~l~~~a~~l~~~Gad~I~ 266 (398)
+++.++.+++.++.|+++|.++....... +|. ..+..+ . +.+.++++.+.+.|+. +.
T Consensus 104 r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~ 181 (335)
T 2qw5_A 104 RQEALEYLKSRVDITAALGGEIMMGPIVIPYGV-FPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEIKKVK-LA 181 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECCSSCTTC-CCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE-EE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEeccccCcccc-ccCCcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHcCCE-EE
Confidence 45678889999999999998865211100 111 001111 1 2334455556667874 44
Q ss_pred Ecc-----CcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH------HH---HHHHHHH--hCCCEEeeccccCCC
Q 015894 267 LGD-----TIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA------LS---NILASLQ--MGISTVDSSVSGLGG 330 (398)
Q Consensus 267 L~D-----T~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA------~A---NalaAl~--aGa~~VD~Sv~GlGe 330 (398)
+-- +.-+-++.++.++++.+.. |. +++.+ |.|.. .. ..+..+. -=+..|+..=. ..
T Consensus 182 lE~~~~~~~~~~~t~~~~~~ll~~v~~--~~--vgl~~--D~~H~~~~g~d~~~~~~~l~~~~~~~ri~~vHlkD~--~~ 253 (335)
T 2qw5_A 182 IEPITHWETPGPNKLSQLIEFLKGVKS--KQ--VGVVI--DSAHEILDGEGPEIFKTQVEYLAQQGRLHYVQVSPP--DR 253 (335)
T ss_dssp ECCCCTTTCSSCCSHHHHHHHHTTCCC--TT--EEEEE--EHHHHHHHCCCHHHHHHHHHHHHHHTCEEEEEECCT--TS
T ss_pred EeeCCcccccccCCHHHHHHHHHhcCC--CC--eeEEE--ecccchhccCChHHHHHHHHHhCCcCCEEEEEECCC--CC
Confidence 422 2234466666665544321 32 44322 22222 22 2222222 22345555432 23
Q ss_pred CCCCCCCCCCccHHHHHHHHHhCCCC
Q 015894 331 CPYAKGASGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 331 cp~a~graGNa~lE~vv~~L~~~Gi~ 356 (398)
+| + +.|..+.+.++..|++ |++
T Consensus 254 ~~--~-G~G~id~~~i~~~L~~-gy~ 275 (335)
T 2qw5_A 254 GA--L-HTSWLPWKSFLTPIVK-VYD 275 (335)
T ss_dssp SC--S-SSSCCCHHHHHHHHHH-HCC
T ss_pred CC--C-CCCCcCHHHHHHHHHc-cCC
Confidence 22 2 3689999999999998 774
No 221
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=90.02 E-value=6.5 Score=37.58 Aligned_cols=157 Identities=13% Similarity=0.088 Sum_probs=97.8
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcc---------cCCCCHHHHHHHHHhc--cCCcEEEEeCCHhhHHHHHHcCCCEEE
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWV---------PQLADAKDVMAAIQNV--EGARFPVLTPNLKGFEAAVAAGAKEVA 190 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~---------p~~~D~~~v~~~i~~~--~~~~l~~l~~n~~~ie~a~~~Gv~~v~ 190 (398)
-.+++.|.++|+.-+ +=++...-+- ..| ..++..+.+++. .+....+.+.|.++.+.+.++|+|.|.
T Consensus 111 g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm-~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~agpDiI~ 188 (286)
T 2p10_A 111 STFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGM-SYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKAGADILV 188 (286)
T ss_dssp HHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTC-CHHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCC-CHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHcCCCEEE
Confidence 345599999999999 7665211000 001 123344444432 355555667899999999999999999
Q ss_pred EeccCchH-HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcc
Q 015894 191 IFASASES-FSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGD 269 (398)
Q Consensus 191 i~~~~Sd~-~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~D 269 (398)
+..+..-- .+-.+...|.+++.+.+.++++.+++..-.+. .++. |.|. .+++++.++.+. --|++-+..+-
T Consensus 189 ~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvi-vLc~--gGpI---stpeDv~~~l~~--t~G~~G~~gAS 260 (286)
T 2p10_A 189 CHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDII-ILSH--GGPI---ANPEDARFILDS--CQGCHGFYGAS 260 (286)
T ss_dssp EECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCE-EEEE--STTC---CSHHHHHHHHHH--CTTCCEEEESH
T ss_pred ECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcE-EEec--CCCC---CCHHHHHHHHhc--CCCccEEEeeh
Confidence 87774211 11223456788888999999999999877664 2332 2233 467777665531 12889988888
Q ss_pred CcCcCCHHH-HHHHHHHHHh
Q 015894 270 TIGVGTPGT-VIPMLEAVLD 288 (398)
Q Consensus 270 T~G~~~P~~-v~~lv~~l~~ 288 (398)
++--+.|++ +.++++.++.
T Consensus 261 sier~p~e~ai~~~~~~fk~ 280 (286)
T 2p10_A 261 SMERLPAEEAIRSQTLAFKA 280 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred hhhcCCHHHHHHHHHHHHHh
Confidence 776666543 5666666664
No 222
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=90.01 E-value=2.4 Score=39.12 Aligned_cols=197 Identities=13% Similarity=0.093 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeCC---------------HhhHHHHHHcCC
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPN---------------LKGFEAAVAAGA 186 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~n---------------~~~ie~a~~~Gv 186 (398)
.+.++.+.++|++.||+. ...| +.+++.+.+++ .++++.++... .+-++.|.+.|+
T Consensus 34 ~~~l~~~~~~G~~~vEl~-----~~~~---~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~ 104 (301)
T 3cny_A 34 QQLLSDIVVAGFQGTEVG-----GFFP---GPEKLNYELKL-RNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINA 104 (301)
T ss_dssp HHHHHHHHHHTCCEECCC-----TTCC---CHHHHHHHHHH-TTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCEEEec-----CCCC---CHHHHHHHHHH-CCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCC
Q ss_pred CEEEEec------cC------------chHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHH
Q 015894 187 KEVAIFA------SA------------SESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPS 248 (398)
Q Consensus 187 ~~v~i~~------~~------------Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~ 248 (398)
+.|.+.. .. .+. ..+...+.+.++.++|++.|+.+. -+.....-..
T Consensus 105 ~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~--------~~~~~~~~l~~l~~~a~~~gv~l~--------lE~~~~~~~~ 168 (301)
T 3cny_A 105 PVAVVSEQTYTIQRSDTANIFKDKPYFTDK--------EWDEVCKGLNHYGEIAAKYGLKVA--------YHHHMGTGIQ 168 (301)
T ss_dssp CEEEEEECTTCCTTCSSCCTTTCCCCCCHH--------HHHHHHHHHHHHHHHHHHTTCEEE--------EECCTTSSSC
T ss_pred CEEEecCCCccccCcccCCcccccccCcHH--------HHHHHHHHHHHHHHHHHHcCCEEE--------EecCCCcccC
Q ss_pred HHHHHHHHHHhCCCCEEEEccCcCcCCHH--HHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccc
Q 015894 249 KVAYVSKQLYDMGCSEISLGDTIGVGTPG--TVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVS 326 (398)
Q Consensus 249 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~--~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~ 326 (398)
...++.+.+.+.+.+.+.++==+|.+.-. +..+.++.+..++ .++|+||..+-... ....-+....+..-.
T Consensus 169 ~~~~~~~l~~~~~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i----~~vHl~D~~~~~~~---~~~~~~~~~~~~~~~ 241 (301)
T 3cny_A 169 TKEETDRLMANTDPKLVGLLYDTGHIAVSDGDYMALLNAHIDRV----VHVHFKDVRRSKEE---ECRAKGLTFQGSFLN 241 (301)
T ss_dssp SHHHHHHHHHTSCTTTCEEEEEHHHHHHHHSCSHHHHHHHGGGE----EEEEECEECHHHHH---HHHHHTCCHHHHHHT
T ss_pred CHHHHHHHHHhCCccceeEEechHHHHHcCCCHHHHHHHHHhhe----eEEEeecCCcchhh---hhhhcccchhhHhhc
Q ss_pred c--CCCCCCCCCCCCCccHHHHHHHHHhCCCC
Q 015894 327 G--LGGCPYAKGASGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 327 G--lGecp~a~graGNa~lE~vv~~L~~~Gi~ 356 (398)
+ .-= +.|..+...++..|++.|++
T Consensus 242 ~~~~~~------G~G~id~~~i~~~L~~~gy~ 267 (301)
T 3cny_A 242 GMFTVP------GDGDLDFKPVYDKLIANNYK 267 (301)
T ss_dssp TCEECT------TTSSCCCHHHHHHHHHTTCC
T ss_pred CccccC------CCCCccHHHHHHHHHhcCCC
No 223
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.87 E-value=3.8 Score=39.37 Aligned_cols=98 Identities=9% Similarity=0.072 Sum_probs=51.3
Q ss_pred HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 015894 178 FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQL 257 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l 257 (398)
++.+++.. .++-|.+.+... +.+++ .+.++.|++.|.... +. -.|. ...+.+.+.+..+.+
T Consensus 67 ~~~~v~~~-grvpViaGvg~~--------~t~~a----i~la~~A~~~Gadav--lv---~~P~-~~~s~~~l~~~f~~v 127 (313)
T 3dz1_A 67 ATRFIKRA-KSMQVIVGVSAP--------GFAAM----RRLARLSMDAGAAGV--MI---APPP-SLRTDEQITTYFRQA 127 (313)
T ss_dssp HHHHHHHC-TTSEEEEECCCS--------SHHHH----HHHHHHHHHHTCSEE--EE---CCCT-TCCSHHHHHHHHHHH
T ss_pred HHHHHHHc-CCCcEEEecCCC--------CHHHH----HHHHHHHHHcCCCEE--EE---CCCC-CCCCHHHHHHHHHHH
Confidence 45555554 555555554321 23333 345577777787643 11 1454 445667666666666
Q ss_pred HhC-C--CCE--EEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEE
Q 015894 258 YDM-G--CSE--ISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVH 298 (398)
Q Consensus 258 ~~~-G--ad~--I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H 298 (398)
.+. + ... ..++...|.-.+. +++..|.+.+|++ +++-
T Consensus 128 a~a~~~~lPiilYn~P~~tg~~l~~---~~~~~La~~~pnI-vgiK 169 (313)
T 3dz1_A 128 TEAIGDDVPWVLQDYPLTLSVVMTP---KVIRQIVMDSASC-VMLK 169 (313)
T ss_dssp HHHHCTTSCEEEEECHHHHCCCCCH---HHHHHHHHHCSSE-EEEE
T ss_pred HHhCCCCCcEEEEeCccccCcCCCH---HHHHHHHHhCCCE-EEEE
Confidence 543 4 443 3455555654432 2444555557764 6776
No 224
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=89.81 E-value=3.1 Score=42.60 Aligned_cols=131 Identities=15% Similarity=0.132 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHH-hccCCcEEEE-eCCHhhHHHHHHcCCCEEEEeccCc
Q 015894 119 VVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ-NVEGARFPVL-TPNLKGFEAAVAAGAKEVAIFASAS 196 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~-~~~~~~l~~l-~~n~~~ie~a~~~Gv~~v~i~~~~S 196 (398)
.+-.+.++.|.++|++.|++..-.. . .....+.++.++ ..|+..+.+- +.+.++.+.+.++|+|.|.+-..--
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g-~----~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~G 302 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHG-H----SKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPG 302 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCC-S----BHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCS
T ss_pred cchHHHHHHHhhcccceEEecccCC-c----chhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCC
Confidence 3446778899999999999975321 0 011234455555 3456554442 4678889999999999998732111
Q ss_pred h---HHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccC
Q 015894 197 E---SFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDT 270 (398)
Q Consensus 197 d---~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT 270 (398)
. .......+.. .+..+.++.+.+++.+++|.+ +.+-.+++.+.+. .++||+.+.+.=.
T Consensus 303 s~~~t~~~~g~g~p---~~~~l~~v~~~~~~~~iPVIa---------~GGI~~~~di~ka----l~~GAd~V~vGs~ 363 (490)
T 4avf_A 303 SICTTRIVAGVGVP---QISAIANVAAALEGTGVPLIA---------DGGIRFSGDLAKA----MVAGAYCVMMGSM 363 (490)
T ss_dssp TTCHHHHHTCBCCC---HHHHHHHHHHHHTTTTCCEEE---------ESCCCSHHHHHHH----HHHTCSEEEECTT
T ss_pred cCCCccccCCCCcc---HHHHHHHHHHHhccCCCcEEE---------eCCCCCHHHHHHH----HHcCCCeeeecHH
Confidence 1 1111222222 345556667777777887742 2344456665543 3579998887643
No 225
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=89.80 E-value=1.4 Score=42.41 Aligned_cols=82 Identities=15% Similarity=0.097 Sum_probs=70.6
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhC-CCCeEEEE-eCCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAV-PVDKLAVH-FHDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~l~~H-~Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|= +++++-.++++.+.+.. +.++|-+| ++|+..-++..+..|-++|
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~G 103 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLG 103 (309)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999994 67888888888888765 35678888 5789999999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 104 adavlv~ 110 (309)
T 3fkr_A 104 AAMVMAM 110 (309)
T ss_dssp CSEEEEC
T ss_pred CCEEEEc
Confidence 9977654
No 226
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=89.80 E-value=12 Score=35.80 Aligned_cols=146 Identities=18% Similarity=0.059 Sum_probs=93.1
Q ss_pred CcEEEEe-CCHhhHHHHHHcCCCEEEEec-cCchHHHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC
Q 015894 166 ARFPVLT-PNLKGFEAAVAAGAKEVAIFA-SASESFSKSN-INCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE 242 (398)
Q Consensus 166 ~~l~~l~-~n~~~ie~a~~~Gv~~v~i~~-~~Sd~~~~~~-~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~ 242 (398)
-.+.++. .+.-....+.++|++.|.+.. +++-.+-..- ...|.++.+..++.+.+.+ ...|.+. .|..
T Consensus 15 ~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~---~~PviaD------~d~G 85 (290)
T 2hjp_A 15 RLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTV---SIPLIAD------IDTG 85 (290)
T ss_dssp CCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTC---SSCEEEE------CTTT
T ss_pred CcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC---CCCEEEE------CCCC
Confidence 3455554 354455566778999998863 3432221111 2357888888776655533 4554322 2333
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcC------------cCCH-HHHHHHHHHHHhhC--CCCeEEEEeCCc-----
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIG------------VGTP-GTVIPMLEAVLDAV--PVDKLAVHFHDT----- 302 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G------------~~~P-~~v~~lv~~l~~~~--p~~~l~~H~Hnd----- 302 (398)
+- +++.+.+.++++.++|+..|.|-|..+ .+.| .++.+.|+++++.. ++..|---+-..
T Consensus 86 yg-~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g 164 (290)
T 2hjp_A 86 FG-NAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLG 164 (290)
T ss_dssp TS-SHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCC
T ss_pred CC-CHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhcccc
Confidence 22 788899999999999999999999973 1444 46677788887763 444444444322
Q ss_pred cchHHHHHHHHHHhCCCEE
Q 015894 303 YGQALSNILASLQMGISTV 321 (398)
Q Consensus 303 ~GlA~ANalaAl~aGa~~V 321 (398)
.--++.-+.+-.+|||+.|
T Consensus 165 ~~~ai~Ra~ay~eAGAd~i 183 (290)
T 2hjp_A 165 QQEAVRRGQAYEEAGADAI 183 (290)
T ss_dssp HHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHcCCcEE
Confidence 3467888889999999955
No 227
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=89.79 E-value=4.8 Score=38.49 Aligned_cols=146 Identities=14% Similarity=0.096 Sum_probs=93.9
Q ss_pred CcEEEEe-CCHhhHHHHHHcCCCEEEEecc-CchH-HHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC
Q 015894 166 ARFPVLT-PNLKGFEAAVAAGAKEVAIFAS-ASES-FSKSN-INCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV 241 (398)
Q Consensus 166 ~~l~~l~-~n~~~ie~a~~~Gv~~v~i~~~-~Sd~-~~~~~-~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~ 241 (398)
-.+.++. .+.-....+.++|++.+.+..+ ++-. +-..- ...|.++.+..++.+.+.+ .+.|.+. .|.
T Consensus 21 ~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~---~~PviaD------~d~ 91 (287)
T 3b8i_A 21 RCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVA---RLPVIAD------ADH 91 (287)
T ss_dssp CCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTC---SSCEEEE------CTT
T ss_pred CcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcC---CCCEEEE------CCC
Confidence 3444444 3444555667799999888654 3321 11111 2357888888776655533 4455322 233
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEccCcC----------cCCHHHHHHHHHHHHhhC--CCCeEEEEeCC---ccchH
Q 015894 242 EGMVPPSKVAYVSKQLYDMGCSEISLGDTIG----------VGTPGTVIPMLEAVLDAV--PVDKLAVHFHD---TYGQA 306 (398)
Q Consensus 242 ~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G----------~~~P~~v~~lv~~l~~~~--p~~~l~~H~Hn---d~GlA 306 (398)
.+- +++.+.+.++++.++|+..|.|-|..+ +..++++.+.|+++++.- ++..|---+-. .+--+
T Consensus 92 Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~a 170 (287)
T 3b8i_A 92 GYG-NALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAV 170 (287)
T ss_dssp CSS-SHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHH
T ss_pred CCC-CHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHH
Confidence 322 788899999999999999999999874 345567888898888763 44334333322 12248
Q ss_pred HHHHHHHHHhCCCEE
Q 015894 307 LSNILASLQMGISTV 321 (398)
Q Consensus 307 ~ANalaAl~aGa~~V 321 (398)
+.-+.+-.+|||+.|
T Consensus 171 i~Ra~ay~eAGAd~i 185 (287)
T 3b8i_A 171 IQRTLAYQEAGADGI 185 (287)
T ss_dssp HHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCEE
Confidence 888889999999955
No 228
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=89.78 E-value=3.9 Score=40.40 Aligned_cols=93 Identities=18% Similarity=0.281 Sum_probs=68.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 244 MVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 244 r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
..|.+...+.++++.++||+.|.++ +-. .+-.+.+..+++..+ +||..-.|-|+-+|++ |+++|++-+-.
T Consensus 42 T~D~~atv~Qi~~l~~aG~diVRva----vp~-~~~a~al~~I~~~~~-vPlvaDiHf~~~lal~----a~e~G~dklRI 111 (366)
T 3noy_A 42 THDVEATLNQIKRLYEAGCEIVRVA----VPH-KEDVEALEEIVKKSP-MPVIADIHFAPSYAFL----SMEKGVHGIRI 111 (366)
T ss_dssp TTCHHHHHHHHHHHHHTTCCEEEEE----CCS-HHHHHHHHHHHHHCS-SCEEEECCSCHHHHHH----HHHTTCSEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeC----CCC-hHHHHHHHHHHhcCC-CCEEEeCCCCHHHHHH----HHHhCCCeEEE
Confidence 4678888888999999999998883 223 344677889998886 6899999999988865 89999997433
Q ss_pred ccccCCCCCCCCCCCCCccHHHHHHHHHhCCC
Q 015894 324 SVSGLGGCPYAKGASGNVATEDVVYMLNGLGV 355 (398)
Q Consensus 324 Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi 355 (398)
-=+=+|. --..++|+...++.|+
T Consensus 112 NPGNig~---------~~~~~~vv~~ak~~~~ 134 (366)
T 3noy_A 112 NPGNIGK---------EEIVREIVEEAKRRGV 134 (366)
T ss_dssp CHHHHSC---------HHHHHHHHHHHHHHTC
T ss_pred CCcccCc---------hhHHHHHHHHHHHcCC
Confidence 2222222 2246788888887665
No 229
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=89.76 E-value=1.8 Score=44.38 Aligned_cols=69 Identities=14% Similarity=0.082 Sum_probs=51.3
Q ss_pred HHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 251 AYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 251 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
.+.++.+.++|+|.|.|-=+. ..+..+.++++.+++.+|+.++..-. .....-+..+.++||+.|.+..
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~--g~~~~~~~~v~~i~~~~p~~~Vi~g~----v~t~e~a~~l~~aGaD~I~vg~ 299 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAH--GHSKGVIERVRWVKQTFPDVQVIGGN----IATAEAAKALAEAGADAVKVGI 299 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSC--CSBHHHHHHHHHHHHHCTTSEEEEEE----ECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHhhcccceEEecccC--CcchhHHHHHHHHHHHCCCceEEEee----eCcHHHHHHHHHcCCCEEEECC
Confidence 456778888999998884333 35678889999999999887776621 1233557888999999999743
No 230
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=89.74 E-value=2.3 Score=43.65 Aligned_cols=70 Identities=16% Similarity=0.173 Sum_probs=51.4
Q ss_pred HHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccc
Q 015894 251 AYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVS 326 (398)
Q Consensus 251 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~ 326 (398)
.+.++.+.++|+|.|.|-=+.| .+..+.++++.+++.+|+.+|.+-. .....-+..++++||+.|.+...
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g--~~~~~~~~i~~ir~~~p~~~Vi~g~----v~t~e~a~~l~~aGaD~I~Vg~g 302 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHG--HSEGVLQRIRETRAAYPHLEIIGGN----VATAEGARALIEAGVSAVKVGIG 302 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTTCCEEEEE----ECSHHHHHHHHHHTCSEEEECSS
T ss_pred HHHHHHHHhccCceEEeccccc--cchHHHHHHHHHHHHCCCceEEEcc----cCcHHHHHHHHHhCCCEEEECCC
Confidence 3557778889999887754433 4577889999999999887776621 12335567888999999987654
No 231
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=89.71 E-value=4.5 Score=40.03 Aligned_cols=118 Identities=12% Similarity=0.117 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC---------------CCC--------------------CCCCH-----
Q 015894 208 IEDSLIRYRDVALAARELSIPVRGYLSCVVGC---------------PVE--------------------GMVPP----- 247 (398)
Q Consensus 208 ~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~---------------~~~--------------------~r~~~----- 247 (398)
.++.++..+.+++.+++.|-.+.+.|... |- |-. ....|
T Consensus 80 ~d~~i~~~k~l~~avh~~G~~i~~QL~H~-Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~ 158 (377)
T 2r14_A 80 TDAQEAGWKGVVEAVHAKGGRIALQLWHV-GRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALET 158 (377)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCG
T ss_pred CHHHHHHHHHHHHHHhhcCCeEEEEccCC-ccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCH
Confidence 45667778888888899998887777652 10 000 00123
Q ss_pred -------HHHHHHHHHHHhCCCCEEEE-------------------ccCcCcCC---HHHHHHHHHHHHhhCCCCeEEEE
Q 015894 248 -------SKVAYVSKQLYDMGCSEISL-------------------GDTIGVGT---PGTVIPMLEAVLDAVPVDKLAVH 298 (398)
Q Consensus 248 -------~~l~~~a~~l~~~Gad~I~L-------------------~DT~G~~~---P~~v~~lv~~l~~~~p~~~l~~H 298 (398)
+.+.+.|+.+.++|+|.|-| .|-.|... +.-+.++++++|+.++..+|++-
T Consensus 159 ~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vr 238 (377)
T 2r14_A 159 DEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIR 238 (377)
T ss_dssp GGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEE
Confidence 56777788888999998877 25555433 34477889999998863278876
Q ss_pred eCCc-------cch----HHHHHHHHHHhCCCEEeeccc
Q 015894 299 FHDT-------YGQ----ALSNILASLQMGISTVDSSVS 326 (398)
Q Consensus 299 ~Hnd-------~Gl----A~ANalaAl~aGa~~VD~Sv~ 326 (398)
..-+ .|. ++.-+.+.-++|++.|+++..
T Consensus 239 ls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~ 277 (377)
T 2r14_A 239 LTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEP 277 (377)
T ss_dssp ECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred eccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 5321 122 333344555799999999764
No 232
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=89.63 E-value=3.8 Score=38.99 Aligned_cols=78 Identities=12% Similarity=-0.039 Sum_probs=40.3
Q ss_pred HHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHhC----CCCEE--EEccCcCc-CCHHHHHHHHHHHH
Q 015894 216 RDVALAARELSIPVRGYLSCVVGCPVEGM-VPPSKVAYVSKQLYDM----GCSEI--SLGDTIGV-GTPGTVIPMLEAVL 287 (398)
Q Consensus 216 ~~~v~~ak~~G~~v~~~l~~~fg~~~~~r-~~~~~l~~~a~~l~~~----Gad~I--~L~DT~G~-~~P~~v~~lv~~l~ 287 (398)
.+.++.|++.|..... ...|.-.+ .+.+.+.+..+.+.+. +...+ .++...|. ++|+.+.++.+
T Consensus 88 i~la~~A~~~Gadavl-----v~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~--- 159 (294)
T 3b4u_A 88 ADQSAEALNAGARNIL-----LAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKA--- 159 (294)
T ss_dssp HHHHHHHHHTTCSEEE-----ECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHH---
T ss_pred HHHHHHHHhcCCCEEE-----EcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHH---
Confidence 3445677777776431 11344445 5666666666655543 44432 34555664 55565555532
Q ss_pred hhCCC-CeEEE-EeCCcc
Q 015894 288 DAVPV-DKLAV-HFHDTY 303 (398)
Q Consensus 288 ~~~p~-~~l~~-H~Hnd~ 303 (398)
..|+ + +++ ....|.
T Consensus 160 -~~pn~i-vgiKds~gd~ 175 (294)
T 3b4u_A 160 -AFPGIV-TGVKDSSGNW 175 (294)
T ss_dssp -HCTTTE-EEEEECCCCH
T ss_pred -hCCCcE-EEEEECCCCH
Confidence 2465 3 555 444443
No 233
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=89.61 E-value=0.79 Score=42.99 Aligned_cols=76 Identities=17% Similarity=0.116 Sum_probs=53.7
Q ss_pred CCHHHHHHHHHHHHhCCCCE--EEEccCcCcCCHHH--HHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCE
Q 015894 245 VPPSKVAYVSKQLYDMGCSE--ISLGDTIGVGTPGT--VIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGIST 320 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~--I~L~DT~G~~~P~~--v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~ 320 (398)
.|...+.+-++.+.+.|+++ +-+.| |...|.- =.++++.+|+..|+.++.+|.+-+.--.. .-.+.++||++
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmD--g~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~--i~~~~~aGAd~ 112 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMD--NHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDAL--IESFAKAGATS 112 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEB--SSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHH--HHHHHHHTCSE
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecC--CCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHH--HHHHHHcCCCE
Confidence 45667788888899999995 55566 6655422 12678888988888899999994433222 34467899998
Q ss_pred Eeec
Q 015894 321 VDSS 324 (398)
Q Consensus 321 VD~S 324 (398)
|..-
T Consensus 113 itvH 116 (246)
T 3inp_A 113 IVFH 116 (246)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8765
No 234
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=89.60 E-value=8.1 Score=37.23 Aligned_cols=149 Identities=15% Similarity=0.140 Sum_probs=90.7
Q ss_pred cCCcEEEEe-CCHhhHHHHHHcCCCEEEEe-ccCchH-HHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC
Q 015894 164 EGARFPVLT-PNLKGFEAAVAAGAKEVAIF-ASASES-FSKSN-INCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGC 239 (398)
Q Consensus 164 ~~~~l~~l~-~n~~~ie~a~~~Gv~~v~i~-~~~Sd~-~~~~~-~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~ 239 (398)
++..+.++. .+.-....+.++|++.+.+. .+++-. +-..- ...|.++.+.+++.+.+.+. .+.|.+.+
T Consensus 16 ~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~--~~PviaD~------ 87 (302)
T 3fa4_A 16 PDSFIVAPGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISP--STPVIADA------ 87 (302)
T ss_dssp TTCCEEEEEECSHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTST--TSCEEEEC------
T ss_pred CCCeEEEecCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhcc--CCCEEEEC------
Confidence 334444443 45545556677899988873 333322 11111 23577888877755544322 45554322
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcC-----------cCCHHHHHHHHHHHHhh----CCCCeEEEEeC----
Q 015894 240 PVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIG-----------VGTPGTVIPMLEAVLDA----VPVDKLAVHFH---- 300 (398)
Q Consensus 240 ~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~----~p~~~l~~H~H---- 300 (398)
|.. -.+++.+.+.++.+.++|+..|.|-|.++ +..+++..+.|++.++. -|+.-|-.-+-
T Consensus 88 d~G-yg~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~ 166 (302)
T 3fa4_A 88 DTG-YGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQT 166 (302)
T ss_dssp TTT-TSSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHH
T ss_pred CCC-CCCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEeccccc
Confidence 222 23677888899999999999999999985 23456666667766643 24433333332
Q ss_pred CccchHHHHHHHHHHhCCCEE
Q 015894 301 DTYGQALSNILASLQMGISTV 321 (398)
Q Consensus 301 nd~GlA~ANalaAl~aGa~~V 321 (398)
..+.-|+.-+.+..+||||.|
T Consensus 167 ~gldeAi~Ra~ay~eAGAD~i 187 (302)
T 3fa4_A 167 HGYEESVARLRAARDAGADVG 187 (302)
T ss_dssp HCHHHHHHHHHHHHTTTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEE
Confidence 223447888888899999966
No 235
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=89.54 E-value=1.9 Score=41.48 Aligned_cols=82 Identities=13% Similarity=0.072 Sum_probs=70.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCC-CCeEEEEe-CCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVP-VDKLAVHF-HDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~l~~H~-Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|= ++.++-.++++.+.+... .+++-+|. +|+..-++..+..|-++|
T Consensus 30 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 109 (307)
T 3s5o_A 30 AEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVG 109 (307)
T ss_dssp SCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999995 778888899999988764 56777765 688999999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 110 adavlv~ 116 (307)
T 3s5o_A 110 ADAAMVV 116 (307)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9977653
No 236
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=89.51 E-value=2.9 Score=41.01 Aligned_cols=121 Identities=11% Similarity=-0.008 Sum_probs=59.1
Q ss_pred HHHHHHcCCCEEEEeccCc--hHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCC--CCCCCCHHHHHHH
Q 015894 178 FEAAVAAGAKEVAIFASAS--ESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCP--VEGMVPPSKVAYV 253 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~S--d~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~--~~~r~~~~~l~~~ 253 (398)
++.|.+.|++.|.+..+.. +..........++...+.+.++.++|++.|..++..+...-..| ...-.+++.+.++
T Consensus 122 i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~lE~~~~~~~~~~~~~t~~~~~~l 201 (387)
T 1bxb_A 122 MDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFALEPKPNEPRGDIYFATVGSMLAF 201 (387)
T ss_dssp HHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHH
T ss_pred HHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCCCCCccCCCHHHHHHH
Confidence 4566778999987754311 00001111223456777788888999988433332333211001 0112355555554
Q ss_pred HHHHHhCCCCE-EE-EccCcCcCCH--HHHHHHHHHHHhhCCCCeEEEEeCCccc
Q 015894 254 SKQLYDMGCSE-IS-LGDTIGVGTP--GTVIPMLEAVLDAVPVDKLAVHFHDTYG 304 (398)
Q Consensus 254 a~~l~~~Gad~-I~-L~DT~G~~~P--~~v~~lv~~l~~~~p~~~l~~H~Hnd~G 304 (398)
+ .+.|.+. +. .-|+. .+.. ..+.+.++.+.. .+ .-.++|++|..+
T Consensus 202 l---~~v~~~~~vgl~lD~g-H~~~~g~d~~~~l~~~~~-~~-~i~~vHl~D~~~ 250 (387)
T 1bxb_A 202 I---HTLDRPERFGLNPEFA-HETMAGLNFVHAVAQALD-AG-KLFHIDLNDQRM 250 (387)
T ss_dssp H---TTSSSGGGEEECCBHH-HHHHTTCCHHHHHHHHHH-TT-CBCCEECCBCCS
T ss_pred H---HHcCCccceEEEEecC-cccccCCCHHHHHHHhcc-CC-cEEEEEeCCCCC
Confidence 4 4456543 33 34652 2211 233444554441 12 237889998754
No 237
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=89.50 E-value=6.2 Score=37.62 Aligned_cols=15 Identities=7% Similarity=0.080 Sum_probs=9.7
Q ss_pred CCCccHHHHHHHHHh
Q 015894 338 SGNVATEDVVYMLNG 352 (398)
Q Consensus 338 aGNa~lE~vv~~L~~ 352 (398)
++|..-+.++...+.
T Consensus 213 ~~n~~P~~~~~l~~a 227 (301)
T 3m5v_A 213 TSNLLPDMISALTHF 227 (301)
T ss_dssp GGGTCHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHH
Confidence 567777777666653
No 238
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=89.48 E-value=1.5 Score=41.93 Aligned_cols=82 Identities=16% Similarity=0.077 Sum_probs=70.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCC--CCeEEEEe-CCccchHHHHHHHHHHh
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVP--VDKLAVHF-HDTYGQALSNILASLQM 316 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p--~~~l~~H~-Hnd~GlA~ANalaAl~a 316 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|- +++++-.++++.+.+... .+++-+|. +|+..-++..+..|-++
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~ 102 (301)
T 3m5v_A 23 GKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEH 102 (301)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHc
Confidence 5689999999999999999999999999995 577888888888887764 36777765 68899999999999999
Q ss_pred CCCEEeec
Q 015894 317 GISTVDSS 324 (398)
Q Consensus 317 Ga~~VD~S 324 (398)
||+.+=+.
T Consensus 103 Gadavlv~ 110 (301)
T 3m5v_A 103 GADGILSV 110 (301)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEc
Confidence 99977654
No 239
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=89.48 E-value=4.4 Score=39.85 Aligned_cols=121 Identities=14% Similarity=0.130 Sum_probs=77.5
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC--------------CC-----C---------------CCCCH-----
Q 015894 207 TIEDSLIRYRDVALAARELSIPVRGYLSCVVGC--------------PV-----E---------------GMVPP----- 247 (398)
Q Consensus 207 s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~--------------~~-----~---------------~r~~~----- 247 (398)
..++.++..+.+++.+++.|-.+.+.|... |- |- . ....|
T Consensus 75 ~~d~~i~~~~~l~~~vh~~g~~i~~QL~H~-Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~ 153 (365)
T 2gou_A 75 YTPEQIAGWRIVTEAVHAKGCAIFAQLWHV-GRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTK 153 (365)
T ss_dssp SSHHHHHHHHHHHHHHHHHSCEEEEEEECC-TTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCH
T ss_pred CCHHHHHHHHHHHHHHHhcCCeEEEEeecC-CCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCH
Confidence 345667778888888889998887777641 10 00 0 00123
Q ss_pred -------HHHHHHHHHHHhCCCCEEEE-------------------ccCcCcCC---HHHHHHHHHHHHhhCCCCeEEEE
Q 015894 248 -------SKVAYVSKQLYDMGCSEISL-------------------GDTIGVGT---PGTVIPMLEAVLDAVPVDKLAVH 298 (398)
Q Consensus 248 -------~~l~~~a~~l~~~Gad~I~L-------------------~DT~G~~~---P~~v~~lv~~l~~~~p~~~l~~H 298 (398)
+.+.+.++.+.++|+|.|-| .|-.|... +.-+.++++++|+.++..+|++-
T Consensus 154 ~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vr 233 (365)
T 2gou_A 154 ADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVR 233 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEE
Confidence 56777788888999999888 34444432 34577889999998852278884
Q ss_pred eCCc-------cc----hHHHHHHHHHHhCCCEEeeccccC
Q 015894 299 FHDT-------YG----QALSNILASLQMGISTVDSSVSGL 328 (398)
Q Consensus 299 ~Hnd-------~G----lA~ANalaAl~aGa~~VD~Sv~Gl 328 (398)
..-+ .| .++.-+.++.++|++.|+++-..+
T Consensus 234 is~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~ 274 (365)
T 2gou_A 234 LAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDW 274 (365)
T ss_dssp ECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBT
T ss_pred EccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc
Confidence 4321 12 233335555679999999986443
No 240
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=89.45 E-value=3.1 Score=42.71 Aligned_cols=129 Identities=19% Similarity=0.164 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHH-hccCCcEEE-EeCCHhhHHHHHHcCCCEEEEecc-Cc
Q 015894 120 VKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ-NVEGARFPV-LTPNLKGFEAAVAAGAKEVAIFAS-AS 196 (398)
Q Consensus 120 ~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~-~~~~~~l~~-l~~n~~~ie~a~~~Gv~~v~i~~~-~S 196 (398)
+-.+.++.|.++|++.|++..-. +. .....+.++.++ ..|+..+.+ -+.+.++.+.+.++|+|.|.+... .+
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~-g~----~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs 305 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSH-GH----SEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGS 305 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSC-TT----SHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCT
T ss_pred chHHHHHHHHhccCceEEecccc-cc----chHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCc
Confidence 34677889999999999998642 11 011224444555 345655544 346778899999999999987421 11
Q ss_pred hH--HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcc
Q 015894 197 ES--FSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGD 269 (398)
Q Consensus 197 d~--~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~D 269 (398)
.. ......+.. .+..+.++++.+++.+++|.+ +.+-.+++.+.+. .++||+.+.+.-
T Consensus 306 ~~~tr~~~g~g~p---~~~~i~~v~~~~~~~~iPVIa---------~GGI~~~~di~ka----la~GAd~V~iGs 364 (496)
T 4fxs_A 306 ICTTRIVTGVGVP---QITAIADAAGVANEYGIPVIA---------DGGIRFSGDISKA----IAAGASCVMVGS 364 (496)
T ss_dssp TBCHHHHHCCCCC---HHHHHHHHHHHHGGGTCCEEE---------ESCCCSHHHHHHH----HHTTCSEEEEST
T ss_pred CcccccccCCCcc---HHHHHHHHHHHhccCCCeEEE---------eCCCCCHHHHHHH----HHcCCCeEEecH
Confidence 10 111112222 345556777777788887742 2344556665443 357999888764
No 241
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=89.40 E-value=5 Score=38.08 Aligned_cols=201 Identities=14% Similarity=0.095 Sum_probs=121.9
Q ss_pred HHHHHHhcCCCEEEEecC-C-----CCCcccCCCCHHHHHHHHHhcc-CCcEEEEe--C-----CH----hhHHHHHHcC
Q 015894 124 LIKLLVSSGLAVVEATSF-V-----SPKWVPQLADAKDVMAAIQNVE-GARFPVLT--P-----NL----KGFEAAVAAG 185 (398)
Q Consensus 124 ia~~L~~aGv~~IEvG~~-~-----~~~~~p~~~D~~~v~~~i~~~~-~~~l~~l~--~-----n~----~~ie~a~~~G 185 (398)
-++.++++|++.|=+|.. + .|+.. .-+.++++..++.+. .+.+.+++ + +. +-+++..++|
T Consensus 28 sA~~~~~aG~~ai~vsg~s~a~~~G~pD~~--~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~~v~~l~~aG 105 (275)
T 2ze3_A 28 SARLLEAAGFTAIGTTSAGIAHARGRTDGQ--TLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRRTVEHFAALG 105 (275)
T ss_dssp HHHHHHHHTCSCEEECHHHHHHHSCCCSSS--SSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEECcHHHHHhCCCCCCC--CCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHHHHHHHHHcC
Confidence 356778899999999842 1 23321 235677776666432 12223333 2 22 2345667899
Q ss_pred CCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCC--------CHHHHHHHHHHH
Q 015894 186 AKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMV--------PPSKVAYVSKQL 257 (398)
Q Consensus 186 v~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~--------~~~~l~~~a~~l 257 (398)
+.-|+|-..+.. ..+-=.+.++..++++.+++.+++.|.++.+ .. --++... ..+...+-++.+
T Consensus 106 aagv~iED~~~~---~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i--~a---Rtda~~~~~g~~~~~~~~~ai~Ra~ay 177 (275)
T 2ze3_A 106 VAGVNLEDATGL---TPTELYDLDSQLRRIEAARAAIDASGVPVFL--NA---RTDTFLKGHGATDEERLAETVRRGQAY 177 (275)
T ss_dssp CSEEEEECBCSS---SSSCBCCHHHHHHHHHHHHHHHHHHTSCCEE--EE---ECCTTTTTCSSSHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCcCC---CCCccCCHHHHHHHHHHHHHhHhhcCCCeEE--EE---echhhhccccccchhhHHHHHHHHHHH
Confidence 999999888642 1122247888889988888877776876431 10 0011000 246666677788
Q ss_pred HhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCC
Q 015894 258 YDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGA 337 (398)
Q Consensus 258 ~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~gr 337 (398)
.++|||.|.+.= .-+++.+.++.+.+ + .|+-+-+.. ++ ...-.--++|+++|-....++ |
T Consensus 178 ~eAGAd~i~~e~---~~~~~~~~~i~~~~----~-~P~n~~~~~--~~--~~~~eL~~lGv~~v~~~~~~~--------r 237 (275)
T 2ze3_A 178 ADAGADGIFVPL---ALQSQDIRALADAL----R-VPLNVMAFP--GS--PVPRALLDAGAARVSFGQSLM--------L 237 (275)
T ss_dssp HHTTCSEEECTT---CCCHHHHHHHHHHC----S-SCEEEECCT--TS--CCHHHHHHTTCSEEECTTHHH--------H
T ss_pred HHCCCCEEEECC---CCCHHHHHHHHHhc----C-CCEEEecCC--CC--CCHHHHHHcCCcEEEEChHHH--------H
Confidence 889999998853 33456666655554 3 234333321 22 223444578999998766655 5
Q ss_pred CCCccHHHHHHHHHhCC
Q 015894 338 SGNVATEDVVYMLNGLG 354 (398)
Q Consensus 338 aGNa~lE~vv~~L~~~G 354 (398)
+-+.++++++..+.+.|
T Consensus 238 aa~~a~~~~~~~i~~~g 254 (275)
T 2ze3_A 238 ATLGLVQRMAAELHAAE 254 (275)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 66788888888888767
No 242
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=89.38 E-value=12 Score=36.87 Aligned_cols=132 Identities=11% Similarity=0.097 Sum_probs=80.2
Q ss_pred HHHHHcCCCEEEEeccCchHHHh-h----------hcCCCHHHHHHHHHHHHHHHH-hCCCcEEEEEeeeecCCCCCCCC
Q 015894 179 EAAVAAGAKEVAIFASASESFSK-S----------NINCTIEDSLIRYRDVALAAR-ELSIPVRGYLSCVVGCPVEGMVP 246 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~Sd~~~~-~----------~~~~s~~~~l~~~~~~v~~ak-~~G~~v~~~l~~~fg~~~~~r~~ 246 (398)
+.+.+-|+..+-+..+ +.... . .-+.+.++.++.+.+.++.++ +.|+.++.-+++. |..
T Consensus 85 ed~a~dgV~Y~Eir~~--P~~~~~~~~~~~~~~~~~~gl~~~~vv~~v~~~~~~a~~~~gi~~~lI~~~~-------R~~ 155 (367)
T 3iar_A 85 EMKAKEGVVYVEVRYS--PHLLANSKVEPIPWNQAEGDLTPDEVVALVGQGLQEGERDFGVKARSILCCM-------RHQ 155 (367)
T ss_dssp HHHHTTTEEEEEEEEC--GGGGCSSSCSSCGGGCCCCSCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEE-------TTC
T ss_pred HHHHHcCCEEEEEEec--HHHhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEeC-------CCC
Confidence 3445668776666543 22211 1 127899999999888888775 4699887545432 112
Q ss_pred HHHHHHHHHHHHhC---CCCEEEEccCcCcCCH---HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHH-hCCC
Q 015894 247 PSKVAYVSKQLYDM---GCSEISLGDTIGVGTP---GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ-MGIS 319 (398)
Q Consensus 247 ~~~l~~~a~~l~~~---Gad~I~L~DT~G~~~P---~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~-aGa~ 319 (398)
++...+.++.+.++ |+-.|-|+-.-....| ....+.++..++. ++++.+|+..+.+. .+...|+. .|++
T Consensus 156 ~~~a~e~~~la~~~~~~~vvG~dL~g~E~~~~~~~~~~f~~~f~~A~~~--gl~~~~HagE~~~~--~~i~~al~~lg~~ 231 (367)
T 3iar_A 156 PNWSPKVVELCKKYQQQTVVAIDLAGDETIPGSSLLPGHVQAYQEAVKS--GIHRTVHAGEVGSA--EVVKEAVDILKTE 231 (367)
T ss_dssp GGGHHHHHHHHHHTTTTTEEEEEEESCTTSTTGGGCHHHHHHHHHHHHH--TCEEEEEESSSSCH--HHHHHHHHTSCCS
T ss_pred CHHHHHHHHHHHhhCCCCEEEEcCCCcccCCCcchHHHHHHHHHHHHHc--CCeeEEecCCcCCh--HHHHHHHHccCCc
Confidence 22234445544444 4444555432233444 5677777776653 46799999887764 56778885 8998
Q ss_pred EEee
Q 015894 320 TVDS 323 (398)
Q Consensus 320 ~VD~ 323 (398)
+|+=
T Consensus 232 RIgH 235 (367)
T 3iar_A 232 RLGH 235 (367)
T ss_dssp EEEE
T ss_pred eeee
Confidence 8743
No 243
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=89.35 E-value=5.6 Score=37.99 Aligned_cols=14 Identities=7% Similarity=-0.080 Sum_probs=8.6
Q ss_pred CCCccHHHHHHHHH
Q 015894 338 SGNVATEDVVYMLN 351 (398)
Q Consensus 338 aGNa~lE~vv~~L~ 351 (398)
.+|..-+.++...+
T Consensus 216 ~an~~P~~~~~l~~ 229 (303)
T 2wkj_A 216 TYNIMGWRYQGIVK 229 (303)
T ss_dssp THHHHHHHHHHHHH
T ss_pred HHHhCHHHHHHHHH
Confidence 55666666666554
No 244
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=89.24 E-value=6.1 Score=36.76 Aligned_cols=169 Identities=12% Similarity=0.027 Sum_probs=85.1
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeCCHhhHHHHHHcCCCEEEEeccCchHHHh
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSK 201 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~ 201 (398)
.++++.|.++|.|.||+|.-.. + ...+..++++.+|+ .++.+..+......+ +.|+|.+-+..-.++-..
T Consensus 23 ~~~~~~l~~~GaD~ielG~S~G---v-t~~~~~~~v~~ir~-~~~Pivlm~y~~n~i----~~G~dg~iiPdLp~ee~~- 92 (240)
T 1viz_A 23 DEQLEILCESGTDAVIIGGSDG---V-TEDNVLRMMSKVRR-FLVPCVLEVSAIEAI----VPGFDLYFIPSVLNSKNA- 92 (240)
T ss_dssp HHHHHHHHTSCCSEEEECC--------CHHHHHHHHHHHTT-SSSCEEEECSCGGGC----CSCCSEEEEEEETTBSSG-
T ss_pred HHHHHHHHHcCCCEEEECCCCC---C-CHHHHHHHHHHhhC-cCCCEEEecCccccc----cCCCCEEEEcccCcccCh-
Confidence 5568999999999999997211 1 01112334444444 455555454432322 679997766433222100
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHhCC-----CcEE--EEEeeeecCCCCC--C-------CCHHHHHHHHHHHHhCCCCEE
Q 015894 202 SNINCTIEDSLIRYRDVALAARELS-----IPVR--GYLSCVVGCPVEG--M-------VPPSKVAYVSKQLYDMGCSEI 265 (398)
Q Consensus 202 ~~~~~s~~~~l~~~~~~v~~ak~~G-----~~v~--~~l~~~fg~~~~~--r-------~~~~~l~~~a~~l~~~Gad~I 265 (398)
+.+ +..-+..++++| +.+. +|+.. .|... | .+++.+..+++.....+-..|
T Consensus 93 --------~~~--~g~~~~a~~~~g~~~~~l~~i~~gy~l~---~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~V 159 (240)
T 1viz_A 93 --------DWI--VGMHQKAMKEYGELMSMEEIVAEGYCIA---NPDCKAAALTEADADLNMDDIVAYARVSELLQLPIF 159 (240)
T ss_dssp --------GGT--THHHHHHHHHCHHHHHHSCEEEEEEEEC---CTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred --------hhh--cchhHHHHHHcCCCCcceeeeecccEEE---CCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEE
Confidence 000 011134567878 6543 45442 23321 0 345555555544433445677
Q ss_pred EEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEE
Q 015894 266 SLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTV 321 (398)
Q Consensus 266 ~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~V 321 (398)
++.- .|. ....++++.+++..+.+|+.+=+ |.........+..||+.|
T Consensus 160 Yl~s-~G~---~~~~~~i~~i~~~~~~~Pv~vGg----GI~t~e~a~~~~~gAd~V 207 (240)
T 1viz_A 160 YLEY-SGV---LGDIEAVKKTKAVLETSTLFYGG----GIKDAETAKQYAEHADVI 207 (240)
T ss_dssp EEEC-TTS---CCCHHHHHHHHHTCSSSEEEEES----SCCSHHHHHHHHTTCSEE
T ss_pred EEeC-CCc---cChHHHHHHHHHhcCCCCEEEEe----ccCCHHHHHHHHhCCCEE
Confidence 6655 665 23577888888876334444322 222223333333498865
No 245
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=89.08 E-value=6.5 Score=38.92 Aligned_cols=136 Identities=13% Similarity=0.031 Sum_probs=82.7
Q ss_pred HHHH-HcCCCEEEEeccC--------chHH--H-hhhcCC-CHHHHHHHHHHHHHHHHhC-CC-cEEEEEeee-ecCCCC
Q 015894 179 EAAV-AAGAKEVAIFASA--------SESF--S-KSNINC-TIEDSLIRYRDVALAAREL-SI-PVRGYLSCV-VGCPVE 242 (398)
Q Consensus 179 e~a~-~~Gv~~v~i~~~~--------Sd~~--~-~~~~~~-s~~~~l~~~~~~v~~ak~~-G~-~v~~~l~~~-fg~~~~ 242 (398)
++|. ++|.|.|.|-..- |+.. . ...+|- +.++-.+.+.++++.+|+. |- .|.+-|+.. +.....
T Consensus 181 ~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~~~~ 260 (379)
T 3aty_A 181 KNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMI 260 (379)
T ss_dssp HHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCC
T ss_pred HHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECcccccccCC
Confidence 4667 8999999886542 2221 1 234555 7777777788888888764 42 344334421 000011
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCc--CcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhC-CC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTI--GVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMG-IS 319 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~--G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aG-a~ 319 (398)
...+.+...++++.+.++|++.|.+.... +...|. + ++.+++.++. ||..=.-- -...+..+++.| ||
T Consensus 261 ~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~---~-~~~ir~~~~i-Pvi~~G~i----t~~~a~~~l~~g~aD 331 (379)
T 3aty_A 261 DSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD---V-VAWVRGSYSG-VKISNLRY----DFEEADQQIREGKVD 331 (379)
T ss_dssp CSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCC---H-HHHHHTTCCS-CEEEESSC----CHHHHHHHHHTTSCS
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccH---H-HHHHHHHCCC-cEEEECCC----CHHHHHHHHHcCCCe
Confidence 34567889999999999999999886521 111232 5 7778887753 44432222 256677888888 77
Q ss_pred EEee
Q 015894 320 TVDS 323 (398)
Q Consensus 320 ~VD~ 323 (398)
.|-.
T Consensus 332 ~V~i 335 (379)
T 3aty_A 332 AVAF 335 (379)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6643
No 246
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=89.06 E-value=0.45 Score=43.96 Aligned_cols=97 Identities=10% Similarity=0.138 Sum_probs=62.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEE--EEccCcCcCCHHH--HHHHHHHHHhhC-CCCeEEEEeCCccchHHHHHHHHHHhCCC
Q 015894 245 VPPSKVAYVSKQLYDMGCSEI--SLGDTIGVGTPGT--VIPMLEAVLDAV-PVDKLAVHFHDTYGQALSNILASLQMGIS 319 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I--~L~DT~G~~~P~~--v~~lv~~l~~~~-p~~~l~~H~Hnd~GlA~ANalaAl~aGa~ 319 (398)
.|...+.+-++.+.+.|++.+ -+.| |...|.- =.++++.+|+.+ |+.++.+|.|-+.-... .-.+.++||+
T Consensus 14 ~D~~~l~~~i~~l~~~g~d~~h~DVmD--g~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~--i~~~~~aGad 89 (228)
T 3ovp_A 14 SDLANLGAECLRMLDSGADYLHLDVMD--GHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQW--VKPMAVAGAN 89 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSCEEEEEEB--SSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGG--HHHHHHHTCS
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEecC--CCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHH--HHHHHHcCCC
Confidence 456677888888999999964 4555 6654422 124678888886 77789999886533222 3456789999
Q ss_pred EEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCC
Q 015894 320 TVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRT 357 (398)
Q Consensus 320 ~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~t 357 (398)
+|..-. | ++. .+..++..++++|...
T Consensus 90 ~itvH~----E-------a~~-~~~~~i~~i~~~G~k~ 115 (228)
T 3ovp_A 90 QYTFHL----E-------ATE-NPGALIKDIRENGMKV 115 (228)
T ss_dssp EEEEEG----G-------GCS-CHHHHHHHHHHTTCEE
T ss_pred EEEEcc----C-------Cch-hHHHHHHHHHHcCCCE
Confidence 887732 3 222 3456666666655543
No 247
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=88.98 E-value=1.3 Score=40.79 Aligned_cols=68 Identities=16% Similarity=0.154 Sum_probs=52.7
Q ss_pred HHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCC
Q 015894 254 SKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLG 329 (398)
Q Consensus 254 a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlG 329 (398)
++++.++|+|.|.+ |+.....|..+.++++.+++. +..+..-+|+ ...+..|.++|+++|=+++.|+.
T Consensus 94 i~~~~~aGad~I~l-~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~t 161 (229)
T 3q58_A 94 VDALAQAGADIIAF-DASFRSRPVDIDSLLTRIRLH--GLLAMADCST-----VNEGISCHQKGIEFIGTTLSGYT 161 (229)
T ss_dssp HHHHHHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--TCEEEEECSS-----HHHHHHHHHTTCSEEECTTTTSS
T ss_pred HHHHHHcCCCEEEE-CccccCChHHHHHHHHHHHHC--CCEEEEecCC-----HHHHHHHHhCCCCEEEecCccCC
Confidence 55678899998854 887778899999999999874 4456665664 46678899999999977777764
No 248
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=88.98 E-value=1.7 Score=42.05 Aligned_cols=81 Identities=15% Similarity=0.031 Sum_probs=69.3
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhC-CCCeEEEEe-CCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAV-PVDKLAVHF-HDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~l~~H~-Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|= ++.++-.++++.+.+.. +.++|-+|. +|+..-++..+..|-++|
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 106 (318)
T 3qfe_A 27 DTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAG 106 (318)
T ss_dssp TEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 5689999999999999999999999999995 77888888888888765 345666665 689999999999999999
Q ss_pred CCEEee
Q 015894 318 ISTVDS 323 (398)
Q Consensus 318 a~~VD~ 323 (398)
|+.+=+
T Consensus 107 adavlv 112 (318)
T 3qfe_A 107 ANYVLV 112 (318)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 997755
No 249
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=88.88 E-value=19 Score=35.76 Aligned_cols=157 Identities=11% Similarity=0.060 Sum_probs=95.1
Q ss_pred CCCHHHHHHHHHHHHh-cCCCEEEEecCCCCCcccCC-CC--HHHHHHHHHhccCCcEEEEeCCH----------hhHHH
Q 015894 115 IVPAVVKVELIKLLVS-SGLAVVEATSFVSPKWVPQL-AD--AKDVMAAIQNVEGARFPVLTPNL----------KGFEA 180 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~-aGv~~IEvG~~~~~~~~p~~-~D--~~~v~~~i~~~~~~~l~~l~~n~----------~~ie~ 180 (398)
.++.++..++++.+.+ .|+..|-++.. .| -+ .| ..++++.+++.++.+...+..|. +-++.
T Consensus 144 ~ls~eei~~~i~~i~~~~gi~~V~ltGG-EP----ll~~d~~L~~il~~l~~~~~v~~i~i~Tng~~~~p~~it~e~l~~ 218 (416)
T 2a5h_A 144 SMPMERIDKAIDYIRNTPQVRDVLLSGG-DA----LLVSDETLEYIIAKLREIPHVEIVRIGSRTPVVLPQRITPELVNM 218 (416)
T ss_dssp BCCHHHHHHHHHHHHTCTTCCEEEEEES-CT----TSSCHHHHHHHHHHHHTSTTCCEEEEECSHHHHCGGGCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCcEEEEECC-CC----CCCCHHHHHHHHHHHHhcCCccEEEEEecccccccccCCHHHHHH
Confidence 5788998999999988 79988777542 22 12 23 45666666766665433333322 23444
Q ss_pred HHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhC
Q 015894 181 AVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM 260 (398)
Q Consensus 181 a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~ 260 (398)
..+. +.+.|.+..+.. ..+ + +.+.+.++.+++.|+.+.......-|- -.+.+.+.++++.+.+.
T Consensus 219 L~~~--~~v~Isl~~~~~---~ei--~-----~~v~~ai~~L~~aGi~v~i~~vll~Gv----Nd~~e~l~~l~~~l~~l 282 (416)
T 2a5h_A 219 LKKY--HPVWLNTHFNHP---NEI--T-----EESTRACQLLADAGVPLGNQSVLLRGV----NDCVHVMKELVNKLVKI 282 (416)
T ss_dssp HGGG--CSEEEEECCCSG---GGC--C-----HHHHHHHHHHHHTTCCEEEEEECCTTT----TCSHHHHHHHHHHHHHT
T ss_pred HHhc--CcEEEEEecCCH---HHH--h-----HHHHHHHHHHHHcCCEEEEEEEEECCC----CCCHHHHHHHHHHHHHc
Confidence 4455 667776654432 111 2 556677788889999876443321111 13567788999999999
Q ss_pred CCCE--EEEccCc-Cc----CCHHHHHHHHHHHHhhCCC
Q 015894 261 GCSE--ISLGDTI-GV----GTPGTVIPMLEAVLDAVPV 292 (398)
Q Consensus 261 Gad~--I~L~DT~-G~----~~P~~v~~lv~~l~~~~p~ 292 (398)
|++. +.+.+.. |. ..+....++++.++..+++
T Consensus 283 gv~~~~i~~~~~~~g~~~~~~~~~~~~eil~~l~~~~~G 321 (416)
T 2a5h_A 283 RVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGHTSG 321 (416)
T ss_dssp TEEEEEEECCCCBTTCGGGCCCHHHHHHHHHTTBTTBCG
T ss_pred CCceEEEeecCCCCCcccccCCcccHHHHHHHHHHHCCC
Confidence 9875 4556642 32 2345567777777776543
No 250
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=88.79 E-value=4.1 Score=40.83 Aligned_cols=126 Identities=15% Similarity=0.218 Sum_probs=72.2
Q ss_pred HHHHHHHHhcCCCEEEEecC-CCCCcccCCCCHHHHHHHHHhccCCcEEE-EeCCHhhHHHHHHcCCCEEEEeccCchHH
Q 015894 122 VELIKLLVSSGLAVVEATSF-VSPKWVPQLADAKDVMAAIQNVEGARFPV-LTPNLKGFEAAVAAGAKEVAIFASASESF 199 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~-~~~~~~p~~~D~~~v~~~i~~~~~~~l~~-l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~ 199 (398)
.+.++.|.++|++.|.+... ..+. ...+.++.+++.-+..+.+ -+.+.+..+.+.++|+|.|.+....-..+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~------~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG~g~Gs~~ 219 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSL------NIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSIC 219 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBH------HHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEEEECC------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcc------cHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEEEEeCCCCcCc
Confidence 67899999999999998532 2221 1123444444322555543 45678889999999999998832110011
Q ss_pred Hhh---hcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcc
Q 015894 200 SKS---NINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGD 269 (398)
Q Consensus 200 ~~~---~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~D 269 (398)
... ..+.. .+..+.++.+.+++.+++|.+ +.+-.+++.+.+ +.++||+.+.+.=
T Consensus 220 ~tr~~~g~g~p---~~~al~~v~~~~~~~~IPVIA---------~GGI~~~~di~k----alalGAd~V~vGt 276 (400)
T 3ffs_A 220 TTRIVAGVGVP---QITAIEKCSSVASKFGIPIIA---------DGGIRYSGDIGK----ALAVGASSVMIGS 276 (400)
T ss_dssp ---CCSCBCCC---HHHHHHHHHHHHTTTTCCEEE---------ESCCCSHHHHHH----HHTTTCSEEEECG
T ss_pred ccccccccchh---HHHHHHHHHHHHHhcCCCEEe---------cCCCCCHHHHHH----HHHcCCCEEEECh
Confidence 110 11111 245555666666667777642 234445655444 3468999887753
No 251
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=88.76 E-value=0.64 Score=44.31 Aligned_cols=140 Identities=17% Similarity=0.146 Sum_probs=85.6
Q ss_pred HHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-CCCCCCCHHHHHHHHHHHHhC
Q 015894 182 VAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGC-PVEGMVPPSKVAYVSKQLYDM 260 (398)
Q Consensus 182 ~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~-~~~~r~~~~~l~~~a~~l~~~ 260 (398)
...-+|.+-+....|-.+. .+++.|+.++++|+.|. +|. ..+....-..+.++.+.+.++
T Consensus 62 ag~yID~lKfg~GTs~l~~-------------~l~ekI~l~~~~gV~v~------~GGTlfE~~l~qg~~~~yl~~~k~l 122 (276)
T 1u83_A 62 ASDYIDFVKFGWGTSLLTK-------------DLEEKISTLKEHDITFF------FGGTLFEKYVSQKKVNEFHRYCTYF 122 (276)
T ss_dssp HGGGCCEEEECTTGGGGCT-------------THHHHHHHHHHTTCEEE------ECHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred hhhhcceEEecCcchhhhH-------------HHHHHHHHHHHcCCeEe------CCcHHHHHHHHcCcHHHHHHHHHHc
Confidence 3345899999877665531 16788999999999875 222 111101112445677778899
Q ss_pred CCCEEEEccCcCcCCHHHHHHHHHHHHhhCCC-CeE-----EEEeCCccchHHHHHHHHHHhCCCEE--eecc---ccCC
Q 015894 261 GCSEISLGDTIGVGTPGTVIPMLEAVLDAVPV-DKL-----AVHFHDTYGQALSNILASLQMGISTV--DSSV---SGLG 329 (398)
Q Consensus 261 Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~-~~l-----~~H~Hnd~GlA~ANalaAl~aGa~~V--D~Sv---~GlG 329 (398)
|.+.|-|.|-+--+.+.+-.++|+.+++.+-. ..+ +...=-+...-+..+...++|||+.| ++-= .|+=
T Consensus 123 GF~~IEISdGti~l~~~~~~~lI~~a~~~f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEaRESG~~Gi~ 202 (276)
T 1u83_A 123 GCEYIEISNGTLPMTNKEKAAYIADFSDEFLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEARESGTGGIC 202 (276)
T ss_dssp TCSEEEECCSSSCCCHHHHHHHHHHHTTTSEEEEECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC----------
T ss_pred CCCEEEECCCcccCCHHHHHHHHHHHHhhcEEeeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEeeeccCCCCcc
Confidence 99999999999999999999999988876521 011 11334567888899999999999854 5522 2555
Q ss_pred CCCCCCCCCCCccHHHH
Q 015894 330 GCPYAKGASGNVATEDV 346 (398)
Q Consensus 330 ecp~a~graGNa~lE~v 346 (398)
+ ..|+.-.+.+
T Consensus 203 ~------~~g~~r~d~v 213 (276)
T 1u83_A 203 S------SSGDVRFQIV 213 (276)
T ss_dssp --------------CCH
T ss_pred C------CCCCCcHHHH
Confidence 5 5667665555
No 252
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=88.75 E-value=2.5 Score=41.85 Aligned_cols=68 Identities=16% Similarity=0.134 Sum_probs=50.4
Q ss_pred HHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeec
Q 015894 251 AYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 251 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
.+.++.+.++|++.|.| ||... .|..+.+.++.+++.+|++++....= .....+..++++||+.|.+.
T Consensus 110 ~~~~~~lieaGvd~I~i-dta~G-~~~~~~~~I~~ik~~~p~v~Vi~G~v----~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLI-DSSHG-HSEGVLQRIRETRAAYPHLEIIGGNV----ATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHHHHTTCSEEEE-ECSCT-TSHHHHHHHHHHHHHCTTCEEEEEEE----CSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhCCCCEEEE-eCCCC-CCHHHHHHHHHHHHhcCCCceEeeee----CCHHHHHHHHHcCCCEEEEe
Confidence 45677888999998776 44432 46678889999999998877765321 23456778889999999983
No 253
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=88.71 E-value=4.5 Score=40.81 Aligned_cols=201 Identities=18% Similarity=0.127 Sum_probs=112.2
Q ss_pred cEEEeCCCcccCCCCCC-CCCHHHHHHHHHHH-HhcCCCE--EEEecCCC-C-CcccCCCCHHHHHHHHHhccCCcEEEE
Q 015894 98 VKIVEVGPRDGLQNEKN-IVPAVVKVELIKLL-VSSGLAV--VEATSFVS-P-KWVPQLADAKDVMAAIQNVEGARFPVL 171 (398)
Q Consensus 98 I~i~D~TLRDG~Q~~~~-~~~~~~k~~ia~~L-~~aGv~~--IEvG~~~~-~-~~~p~~~D~~~v~~~i~~~~~~~l~~l 171 (398)
..|+..|-....|.-|. .++.+....++..+ .++|++. |=++.... + .| |-..+++-+...+
T Consensus 40 PVIi~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~~~w--~~~~~~~am~~a~---------- 107 (420)
T 2fiq_A 40 KVLIEATSNQVNQFGGYTGMTPADFREFVFAIADKVGFARERIILGGDHLGPNCW--QQENVDAAMEKSV---------- 107 (420)
T ss_dssp CEEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEEEESSGGG--TTSBHHHHHHHHH----------
T ss_pred CEEEEcChhhhhhccCCCCCCHHHHHHHHHHHHHHcCcCcceEEEECCCCCCccc--cccchhhhhhhHH----------
Confidence 44556665444443222 23356665655555 5678883 55543221 1 12 1122343333322
Q ss_pred eCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc--EEEEEeeeecCCC--------
Q 015894 172 TPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIP--VRGYLSCVVGCPV-------- 241 (398)
Q Consensus 172 ~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~--v~~~l~~~fg~~~-------- 241 (398)
+.+..++++|...|.+=.|.+.. ..++-.+..-..++.++++++|.+. .. +.+.|..+.|.++
T Consensus 108 ----e~i~~aI~aGFtSVMiD~S~~~~--~~~~pl~eNi~~~rt~elv~~Ah~~-~~~~~eaElG~vgG~Ev~v~~~~~~ 180 (420)
T 2fiq_A 108 ----ELVKAYVRAGFSKIHLDASMSCA--GDPIPLAPETVAERAAVLCFAAESV-ATDCQREQLSYVIGTEVPVPGGEAS 180 (420)
T ss_dssp ----HHHHHHHHTTCCEEEECCCSCCB--TCCSSCCHHHHHHHHHHHHHHHHHH-CCHHHHHHCEEEEECSSCC------
T ss_pred ----HHHHHHHHhCCCEEEECCCCCCC--CCCCCccHHHHHHHHHHHHHHHHHH-cccCCcccceEEeeeecCCCCCccc
Confidence 36788999999999985443110 0111122222334468888888876 32 1111222223221
Q ss_pred -C-C--CCCHHHHHHHHH----HHHhCCCCE-----EEEccCcCc---------CCHHHHHHHHHHHHhhCCCCe-EEEE
Q 015894 242 -E-G--MVPPSKVAYVSK----QLYDMGCSE-----ISLGDTIGV---------GTPGTVIPMLEAVLDAVPVDK-LAVH 298 (398)
Q Consensus 242 -~-~--r~~~~~l~~~a~----~l~~~Gad~-----I~L~DT~G~---------~~P~~v~~lv~~l~~~~p~~~-l~~H 298 (398)
. + .++|+...++++ .+.+.|+|. |.|+=..|. +.+..+.+ |++.++. | |.+-
T Consensus 181 ~~~~~~~T~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y~~~~ld~e~l~~----I~~~v~~-P~LVle 255 (420)
T 2fiq_A 181 AIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEAQA----LAQWIEN-TRMVYE 255 (420)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSSCEECCCGGGGHH----HHHHHTT-SSCEEE
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCCCCCCcCHHHHHH----HHHhcCC-CCEEEe
Confidence 1 1 589999988887 666789766 335533332 33444444 4443332 4 7777
Q ss_pred eCCccchHHHHHHHHHHhCCCEEe
Q 015894 299 FHDTYGQALSNILASLQMGISTVD 322 (398)
Q Consensus 299 ~Hnd~GlA~ANalaAl~aGa~~VD 322 (398)
.|.+.|..-.+...+++.|+..|+
T Consensus 256 ~HGgSg~~~e~l~~~v~~Gi~kiN 279 (420)
T 2fiq_A 256 AHSTDYQTRTAYWELVRDHFAILK 279 (420)
T ss_dssp ESCCTTCCHHHHHHHHHTTEEEEE
T ss_pred cCCCCCCCHHHHHHHHHcCCCEEE
Confidence 799999999999999999999988
No 254
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=88.71 E-value=2.6 Score=41.70 Aligned_cols=100 Identities=12% Similarity=0.162 Sum_probs=77.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCC-CCeEEEEe-CCccchHHHHHHHHHHh
Q 015894 242 EGMVPPSKVAYVSKQLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVP-VDKLAVHF-HDTYGQALSNILASLQM 316 (398)
Q Consensus 242 ~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~l~~H~-Hnd~GlA~ANalaAl~a 316 (398)
.+..|.+.+.++++.+.+.|++.|.++-|.| .++.++-.++++.+.+... .+++-++. +|+..-++..+..|-++
T Consensus 74 dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~ 153 (360)
T 4dpp_A 74 DGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAV 153 (360)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999 5677888888888887653 45777755 68899999999999999
Q ss_pred CCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q 015894 317 GISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLN 351 (398)
Q Consensus 317 Ga~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~ 351 (398)
||+.+=+. .||-. .++-++++..++
T Consensus 154 Gadavlvv------~PyY~----k~sq~gl~~hf~ 178 (360)
T 4dpp_A 154 GMHAALHI------NPYYG----KTSIEGLIAHFQ 178 (360)
T ss_dssp TCSEEEEE------CCCSS----CCCHHHHHHHHH
T ss_pred CCCEEEEc------CCCCC----CCCHHHHHHHHH
Confidence 99977553 23221 235577777766
No 255
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=88.60 E-value=4 Score=38.32 Aligned_cols=151 Identities=17% Similarity=0.143 Sum_probs=89.4
Q ss_pred HHHHHHHhcCCCEEEEecC-C-----CCCcccCCCCHHHHHHHHHhcc-CCcEEEEe--C----C--HhhHHHHHHcCCC
Q 015894 123 ELIKLLVSSGLAVVEATSF-V-----SPKWVPQLADAKDVMAAIQNVE-GARFPVLT--P----N--LKGFEAAVAAGAK 187 (398)
Q Consensus 123 ~ia~~L~~aGv~~IEvG~~-~-----~~~~~p~~~D~~~v~~~i~~~~-~~~l~~l~--~----n--~~~ie~a~~~Gv~ 187 (398)
--++.++++|++.|=+|.. . .|+..+ -+.++++..++.+. .+.+.+++ + + .+-+.+..++|+.
T Consensus 31 ~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~--vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~~~~~~~~l~~aGa~ 108 (255)
T 2qiw_A 31 WSAGLVEEAGFSGLTIGSHPVADATGSSDGEN--MNFADYMAVVKKITSAVSIPVSVDVESGYGLSPADLIAQILEAGAV 108 (255)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHHTTCCTTTC--SCHHHHHHHHHHHHHHCSSCEEEECTTCTTCCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCEEEEChHHHHHhCCCCCCCC--cCHHHHHHHHHHHHhcCCCCEEeccCCCcCcHHHHHHHHHHHcCCc
Confidence 4567788999999999842 1 233221 34567766665432 12223333 2 1 3345566789999
Q ss_pred EEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc--EEEEEeeeecCCCCCCC----CHHHHHHHHHHHHhCC
Q 015894 188 EVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIP--VRGYLSCVVGCPVEGMV----PPSKVAYVSKQLYDMG 261 (398)
Q Consensus 188 ~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~--v~~~l~~~fg~~~~~r~----~~~~l~~~a~~l~~~G 261 (398)
-|.|-... |...+-=.+.++..++++.+++.+++.|++ |.+..-... .++. ..+...+-++.+.++|
T Consensus 109 gv~iEd~~---~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~----~g~~~~~~~~~~ai~ra~a~~eAG 181 (255)
T 2qiw_A 109 GINVEDVV---HSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVK----LGADVFEDPMVEAIKRIKLMEQAG 181 (255)
T ss_dssp EEEECSEE---GGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHH----HCTTTSSSHHHHHHHHHHHHHHHT
T ss_pred EEEECCCC---CCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhh----ccCCcchHHHHHHHHHHHHHHHcC
Confidence 99998774 222222236778888888888877777887 332221100 0111 2467777788888999
Q ss_pred CCEEEEccCcCcCCHHHHHHHHHH
Q 015894 262 CSEISLGDTIGVGTPGTVIPMLEA 285 (398)
Q Consensus 262 ad~I~L~DT~G~~~P~~v~~lv~~ 285 (398)
|+.|.+. |.-++..+.++.+.
T Consensus 182 Ad~i~~e---~~~~~~~~~~i~~~ 202 (255)
T 2qiw_A 182 ARSVYPV---GLSTAEQVERLVDA 202 (255)
T ss_dssp CSEEEEC---CCCSHHHHHHHHTT
T ss_pred CcEEEEc---CCCCHHHHHHHHHh
Confidence 9999984 33334555444443
No 256
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=88.58 E-value=23 Score=36.05 Aligned_cols=225 Identities=13% Similarity=0.072 Sum_probs=131.7
Q ss_pred CCCHHHHHHHHH-HHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc-cCCcEEEEeCCHhhH---HHHHHcCCCEE
Q 015894 115 IVPAVVKVELIK-LLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV-EGARFPVLTPNLKGF---EAAVAAGAKEV 189 (398)
Q Consensus 115 ~~~~~~k~~ia~-~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~-~~~~l~~l~~n~~~i---e~a~~~Gv~~v 189 (398)
.++..++..|.. .-.+.|+|.|-+.|--++ +|..++.+.+++. .++.+.+-.-+.+++ +.-++. .|.|
T Consensus 178 ~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a------~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~~-sDgI 250 (461)
T 3qtg_A 178 TPAEEDVEALKAISPIRDNIDYVAISLAKSC------KDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQC-SDYV 250 (461)
T ss_dssp SSCHHHHHHHHHHGGGGGGCCEEEECSCCSH------HHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHHT-CSEE
T ss_pred CCCHHHHHHHHHHHHhhcCCCEEEecCCCCH------HHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHh-cccE
Confidence 356666666542 567889999988764332 3445555555533 245555656665554 344444 5766
Q ss_pred EEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-CCCCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 015894 190 AIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGC-PVEGMVPPSKVAYVSKQLYDMGCSEISLG 268 (398)
Q Consensus 190 ~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~-~~~~r~~~~~l~~~a~~l~~~Gad~I~L~ 268 (398)
.+. -.|. ...+..++.....+.+++.|+++|..|-+. +.+.-+ -...+.+..++-+++..+. -|+|.+-|.
T Consensus 251 mVa--RGDL----gvei~~e~v~~~Qk~ii~~~~~~gkpvi~A-TQMLeSMi~~p~PTRAEvsDVanAV~-dGaDavMLS 322 (461)
T 3qtg_A 251 VVA--RGDL----GLHYGLDALPIVQRRIVHTSLKYGKPIAVA-TQLLDSMQSSPIPTRAEINDVFTTAS-MGVDSLWLT 322 (461)
T ss_dssp EEE--HHHH----TTTSCTTTHHHHHHHHHHHHHHTTCCEEEE-SSSSGGGGTCSSCCHHHHHHHHHHHH-TTCSEEEEC
T ss_pred EEc--cccc----cccCCHHHHHHHHHHHHHHHHHhCCCEEEe-ccchHhhccCCCccHHHHHHHHHHHH-hCCcEEEEc
Confidence 653 1232 223345566677788999999999987521 000101 1123456778888776544 799999987
Q ss_pred -cCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCcc--chHHHHHHHHHHhCCCEEeeccccC-----CC-CCCCCCCCC
Q 015894 269 -DTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTY--GQALSNILASLQMGISTVDSSVSGL-----GG-CPYAKGASG 339 (398)
Q Consensus 269 -DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~--GlA~ANalaAl~aGa~~VD~Sv~Gl-----Ge-cp~a~graG 339 (398)
.|+-.-.|.+..+.+..+....-...-.++...+. ..|.|...+|-..++.+|-.|-.|- .. .|-+|- -.
T Consensus 323 gETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~aia~aa~~~a~~~~a~Iv~~T~SG~tA~~vsr~RP~~pI-ia 401 (461)
T 3qtg_A 323 NETASGKYPLAAVSWLSRILMNVEYQIPQSPLLQNSRDRFAKGLVELAQDLGANILVFSMSGTLARRIAKFRPRGVV-YV 401 (461)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHTCCCCCCCCCCCCSHHHHHHHHHHHHHHHHTCEEEEECSSSHHHHHHHTTCCSSCE-EE
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHhhhhhccCCCCHHHHHHHHHHHHHHhcCCCEEEECCCcHHHHHHHhhCCCCCE-EE
Confidence 68888899998888888887652110011222222 2344455566678888777888873 33 232221 12
Q ss_pred CccHHHHHHHHHh-CCC
Q 015894 340 NVATEDVVYMLNG-LGV 355 (398)
Q Consensus 340 Na~lE~vv~~L~~-~Gi 355 (398)
-.+-+.+...|.- .|+
T Consensus 402 ~T~~~~~~r~l~l~~GV 418 (461)
T 3qtg_A 402 GTPNVRVARSLSIVWAL 418 (461)
T ss_dssp EESCHHHHHHHTTSTTE
T ss_pred eCCCHHHHhhceeccce
Confidence 3345777777764 355
No 257
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=88.54 E-value=20 Score=35.36 Aligned_cols=137 Identities=12% Similarity=0.043 Sum_probs=89.7
Q ss_pred HHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHH-hCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 015894 179 EAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAAR-ELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQL 257 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak-~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l 257 (398)
+.+.+-|+..+-+.. ++.+....-|.+.++.++.+.+.++.++ +.|+.++.-+++. -..+++...+.++.+
T Consensus 103 ed~a~dgV~Y~Eirf--~P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~------R~~~~e~a~~~~~~a 174 (380)
T 4gxw_A 103 EDAAAHNVRHAEFFW--NPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIGARLIPSID------REQDPDEAVAIVDWM 174 (380)
T ss_dssp HHHHTTTEEEEEEEE--CHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEE------TTSCHHHHHHHHHHH
T ss_pred HHHHHCCCeEEEEEc--CHHHhccccCCCHHHHHHHHHHHHHHHHHhcCCcEEEEEeec------CCCCHHHHHHHHHHH
Confidence 444556777666654 3443333357889999999888887765 5798887544431 124678887887777
Q ss_pred HhC---CCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHH-hCCCEEeeccc
Q 015894 258 YDM---GCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ-MGISTVDSSVS 326 (398)
Q Consensus 258 ~~~---Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~-aGa~~VD~Sv~ 326 (398)
.++ |+-.|.|+-.=....|....+.+...++. ++++.+|+=..-| ...|...|++ .|+++|+=.+.
T Consensus 175 ~~~~~~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~--Gl~~t~HAGE~~~-p~~~i~~al~~lga~RIgHG~~ 244 (380)
T 4gxw_A 175 KANRADEVAGIGIDYRENDRPPELFWKAYRDARAA--GFRTTAHAGEFGM-PWRNVETAVDLLHVDRVDHGYT 244 (380)
T ss_dssp HHTCCTTBCEEEEESCCTTCCGGGGHHHHHHHHHT--TCEEEEEESCTTC-CHHHHHHHHHTSCCSEEEECGG
T ss_pred HHhCCCCEEEEeecCCCCCCCHHHHHHHHHHHHHc--CCCeeeeccccCC-chHHHHHHHHHcCCccccccee
Confidence 665 34455554332344577788888887764 4689999876433 2357788886 79999975444
No 258
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=88.54 E-value=6.5 Score=37.32 Aligned_cols=197 Identities=12% Similarity=0.065 Sum_probs=96.5
Q ss_pred HHHHHHHHhc-CCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeC---------------CH----------
Q 015894 122 VELIKLLVSS-GLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTP---------------NL---------- 175 (398)
Q Consensus 122 ~~ia~~L~~a-Gv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~---------------n~---------- 175 (398)
.+.++.+.++ |++.||+.++... -.+.+++.+.+++ .++++.++.+ +.
T Consensus 36 ~e~l~~aa~~~G~~~VEl~~~~~~-----~~~~~~l~~~l~~-~Gl~i~~~~~~~~~~~~~~g~l~~~d~~~r~~~i~~~ 109 (333)
T 3ktc_A 36 IDQINAAKEVGELSYVDLPYPFTP-----GVTLSEVKDALKD-AGLKAIGITPEIYLQKWSRGAFTNPDPAARAAAFELM 109 (333)
T ss_dssp HHHHHHHHHHSSEEEEEEEESCST-----TCCHHHHHHHHHH-HTCEEEEEEECTTSGGGTTCSTTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEecCCCcc-----hhHHHHHHHHHHH-cCCeEEEEecCcCcccccCCCCCCcCHHHHHHHHHHH
Confidence 3456666778 9999999754321 1456666666653 2455444322 10
Q ss_pred -hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC--CCCCCHHHHHH
Q 015894 176 -KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV--EGMVPPSKVAY 252 (398)
Q Consensus 176 -~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~--~~r~~~~~l~~ 252 (398)
+.++.|.+.|++.|.+..+. +-. ......+.++.++++.+.++.+-+..-.+.+.|...-..+. ..-.+.+.+..
T Consensus 110 ~~~i~~A~~LGa~~vv~~~g~-~g~-~~~~~~~~~~~~~~~~~~l~~l~~~a~~~~i~lE~~p~~~~~~~~~~~~~~~~~ 187 (333)
T 3ktc_A 110 HESAGIVRELGANYVKVWPGQ-DGW-DYPFQVSHKNLWKLAVDGMRDLAGANPDVKFAIEYKPREPRVKMTWDSAARTLL 187 (333)
T ss_dssp HHHHHHHHHHTCSEEEECCTT-CEE-SSTTSSCHHHHHHHHHHHHHHHHHTCTTSEEEEECCSCSSSSEESSCSHHHHHH
T ss_pred HHHHHHHHHhCCCEEEECCCC-CCc-CCCCcCCHHHHHHHHHHHHHHHHHHhhcCCEEEEEecCCCCccccCCCHHHHHH
Confidence 12456677899999775441 100 00112345566666555554443332223333332110111 11235666666
Q ss_pred HHHHHHhCCCC-EEEEccCcCcCCH--HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCC
Q 015894 253 VSKQLYDMGCS-EISLGDTIGVGTP--GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLG 329 (398)
Q Consensus 253 ~a~~l~~~Gad-~I~L~DT~G~~~P--~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlG 329 (398)
+++. .|.+ .-..-||. .+.+ ....+.++.++ ..+.-.++|++|..| +.+ . ++
T Consensus 188 ll~~---v~~~~vgl~lD~~-H~~~~g~~~~~~~~~~~--~~~~i~~vH~~D~~~------------~~d---~---~~- 242 (333)
T 3ktc_A 188 GIED---IGLDNVGVLLDFG-HALYGGESPADSAQLII--DRGRLFGMDVNDNLR------------GWD---D---DL- 242 (333)
T ss_dssp HHHH---HTCTTEEEEEEHH-HHHHTTCCHHHHHHHHH--HTTCEEEEEBCBCCS------------SSC---C---CB-
T ss_pred HHHH---cCCcceEEEEecC-cHhhhcCCHHHHHHHHH--hCCCEEEEEeCCCCC------------CCC---C---Cc-
Confidence 5554 3433 22334542 1111 11222333322 122235889998654 111 0 00
Q ss_pred CCCCCCCCCCC-ccHHHHHHHHHhCCCC
Q 015894 330 GCPYAKGASGN-VATEDVVYMLNGLGVR 356 (398)
Q Consensus 330 ecp~a~graGN-a~lE~vv~~L~~~Gi~ 356 (398)
.+ +.|+ .++..++..|++.|++
T Consensus 243 ----~~-G~G~~~d~~~i~~~L~~~gy~ 265 (333)
T 3ktc_A 243 ----VV-GTVHMTEIFEFFYVLKINNWQ 265 (333)
T ss_dssp ----CT-TSSCHHHHHHHHHHHHHTTCC
T ss_pred ----CC-CCCCHHHHHHHHHHHHHcCCC
Confidence 11 3677 6999999999987764
No 259
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=88.52 E-value=2.2 Score=41.16 Aligned_cols=82 Identities=13% Similarity=0.069 Sum_probs=68.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhC-CCCeEEEEe-CCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAV-PVDKLAVHF-HDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~l~~H~-Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|= ++.++-.++++.+.+.. ..++|-++. +|+..-++..+..|-++|
T Consensus 38 g~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~G 117 (315)
T 3si9_A 38 GAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAG 117 (315)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999995 56777788888887765 345666664 689999999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.|=+.
T Consensus 118 adavlv~ 124 (315)
T 3si9_A 118 ADAVLVV 124 (315)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9977543
No 260
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=88.51 E-value=3.6 Score=38.21 Aligned_cols=172 Identities=12% Similarity=0.038 Sum_probs=87.0
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc--cCCcEEEEeCCHhhHHHHHHcCCCEEEEeccCchHH
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV--EGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESF 199 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~--~~~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~ 199 (398)
.++++.|.++|.|.||+|. + .. ...+.+++.++++ .++.+..+..+...+ ++|+|.+-+.+=.++-.
T Consensus 23 ~~~~~~l~~~GaD~IelG~--S-~g----~t~~~~~~~v~~ir~~~~Pivl~~y~~n~i----~~gvDg~iipdLp~ee~ 91 (234)
T 2f6u_A 23 DEIIKAVADSGTDAVMISG--T-QN----VTYEKARTLIEKVSQYGLPIVVEPSDPSNV----VYDVDYLFVPTVLNSAD 91 (234)
T ss_dssp HHHHHHHHTTTCSEEEECC--C-TT----CCHHHHHHHHHHHTTSCCCEEECCSSCCCC----CCCSSEEEEEEETTBSB
T ss_pred HHHHHHHHHcCCCEEEECC--C-CC----CCHHHHHHHHHHhcCCCCCEEEecCCcchh----hcCCCEEEEcccCCCCC
Confidence 4568999999999999997 2 11 1234455555433 345544444332222 77999877653322211
Q ss_pred HhhhcCCCHHHHHHHHHHHHHHHHhCC-----CcE--EEEEeeeecCCCC---------CCCCHHHHHHHHHHHHh-CCC
Q 015894 200 SKSNINCTIEDSLIRYRDVALAARELS-----IPV--RGYLSCVVGCPVE---------GMVPPSKVAYVSKQLYD-MGC 262 (398)
Q Consensus 200 ~~~~~~~s~~~~l~~~~~~v~~ak~~G-----~~v--~~~l~~~fg~~~~---------~r~~~~~l~~~a~~l~~-~Ga 262 (398)
-.+-.....+.+..+.+.++++| +.+ .+|+.. .|.. ...+++.+..+++...+ +|-
T Consensus 92 ----~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~---~P~~~~~rl~~g~~~~~~e~~~~~a~~g~~~l~~ 164 (234)
T 2f6u_A 92 ----GDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVL---NPDSAVARVTKALCNIDKELAASYALVGEKLFNL 164 (234)
T ss_dssp ----GGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEEC---CTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCC
T ss_pred ----HHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEE---CCCCceEEeecCCCCCCHHHHHHHHHhhhhhcCC
Confidence 01110111111111112236667 654 345543 3432 11256666666655542 355
Q ss_pred CEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeE--EEEeCCccchHHHHHHHHHHhCCCEE
Q 015894 263 SEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKL--AVHFHDTYGQALSNILASLQMGISTV 321 (398)
Q Consensus 263 d~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l--~~H~Hnd~GlA~ANalaAl~aGa~~V 321 (398)
..|++.- .|. ....++++.+++..+++|+ ++-.++- ..+-..++ ||+.|
T Consensus 165 ~~Vyl~~-~G~---~~~~~~i~~i~~~~~~~Pv~vGgGI~s~-----e~a~~~~~-gAd~V 215 (234)
T 2f6u_A 165 PIIYIEY-SGT---YGNPELVAEVKKVLDKARLFYGGGIDSR-----EKAREMLR-YADTI 215 (234)
T ss_dssp SEEEEEC-TTS---CCCHHHHHHHHHHCSSSEEEEESCCCSH-----HHHHHHHH-HSSEE
T ss_pred CEEEEeC-CCC---cchHHHHHHHHHhCCCCCEEEEecCCCH-----HHHHHHHh-CCCEE
Confidence 7777654 675 2356788888887633444 4444432 22223344 88865
No 261
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=88.47 E-value=7.5 Score=38.21 Aligned_cols=68 Identities=15% Similarity=0.133 Sum_probs=49.0
Q ss_pred HHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 251 AYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 251 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
.+.++.+.++|++.|.|- + +...|..+.+.++.+++.+ ++++.+..=. ....+..++++||+.|.+++
T Consensus 107 ~e~a~~l~eaGad~I~ld-~-a~G~~~~~~~~i~~i~~~~-~~~Vivg~v~----t~e~A~~l~~aGaD~I~VG~ 174 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLD-S-AHGHSLNIIRTLKEIKSKM-NIDVIVGNVV----TEEATKELIENGADGIKVGI 174 (361)
T ss_dssp HHHHHHHHHTTCSEEEEC-C-SCCSBHHHHHHHHHHHHHC-CCEEEEEEEC----SHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHcCcCeEEEe-C-CCCCcHHHHHHHHHHHHhc-CCcEEEccCC----CHHHHHHHHHcCcCEEEEec
Confidence 466778889999988763 2 2346788889999999988 4566552212 23556788899999999843
No 262
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=88.41 E-value=26 Score=36.44 Aligned_cols=167 Identities=13% Similarity=0.142 Sum_probs=95.1
Q ss_pred cEEEeCCC---cccCCCCCCCC-CHHHHHHHHHHHHhcC-----CCEEEEecCCC-CCcccCCCCHHHHHHHH---Hhcc
Q 015894 98 VKIVEVGP---RDGLQNEKNIV-PAVVKVELIKLLVSSG-----LAVVEATSFVS-PKWVPQLADAKDVMAAI---QNVE 164 (398)
Q Consensus 98 I~i~D~TL---RDG~Q~~~~~~-~~~~k~~ia~~L~~aG-----v~~IEvG~~~~-~~~~p~~~D~~~v~~~i---~~~~ 164 (398)
+-|+.+|. =||++. + +.+..++.++.+.+.| .+.|++|.-.. |... .....+|+.+.+ +.+.
T Consensus 228 MGIlNvTPDSFsDGG~~----~~~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~-~vs~eEEl~RvvpvI~~i~ 302 (545)
T 2bmb_A 228 MAIFNATPDSFSDGGEH----FADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSI-QASEEEEIRRSIPLIKAIR 302 (545)
T ss_dssp EEEEECSCSSTTTTTTT----TTCHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCC-CCCHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCcCCCcC----cCCHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCC-CCCHHHHHHHHHHHHHHHH
Confidence 44667766 456543 4 7899999999999999 99999996432 3321 122233333333 2221
Q ss_pred --------CCcEEEEeCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEee
Q 015894 165 --------GARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAAREL-SIPVRGYLSC 235 (398)
Q Consensus 165 --------~~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~-G~~v~~~l~~ 235 (398)
++.+++=+...+-+++|+++|++.|.=..... .+ .++.+.++++ |..+. +|.
T Consensus 303 ~~~~~~~~~vpISIDT~~a~VaeaAl~aGadIINDVsg~~---------~d--------~~m~~vva~~~~~~vV--lmH 363 (545)
T 2bmb_A 303 ESTELPQDKVILSIDTYRSNVAKEAIKVGVDIINDISGGL---------FD--------SNMFAVIAENPEICYI--LSH 363 (545)
T ss_dssp HCSSSCGGGEEEEEECCCHHHHHHHHHTTCCEEEETTTTS---------SC--------TTHHHHHHTCTTSEEE--EEC
T ss_pred hhccccCCCCeEEEeCCcHHHHHHHHHcCCCEEEeCCCCc---------CC--------hHHHHHHHHhCCCeEE--EEC
Confidence 22233323566778999999999886321110 00 1345667788 87664 554
Q ss_pred eecCCCC--C--CCC-----------------------------H-----HHHHHHHHHHHhCCCC--EEEEccCcCcC-
Q 015894 236 VVGCPVE--G--MVP-----------------------------P-----SKVAYVSKQLYDMGCS--EISLGDTIGVG- 274 (398)
Q Consensus 236 ~fg~~~~--~--r~~-----------------------------~-----~~l~~~a~~l~~~Gad--~I~L~DT~G~~- 274 (398)
.-|.|.. . .++ . +++.+.++.+.++|++ .|.|==-+|..
T Consensus 364 ~rG~p~tm~~~~~y~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vv~~v~~~l~~~i~~a~~~GI~~~~IilDPGiGF~K 443 (545)
T 2bmb_A 364 TRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQLDDLKDKTVLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFAK 443 (545)
T ss_dssp CCSCTTTGGGCCCCSSCTTTTTEEEEEETTEEGGGSTTHHHHCHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSC
T ss_pred CCCCCCCccccccccccccccccchhccccccccccccccccchHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCccc
Confidence 4444421 0 111 1 3455567778889986 45543333433
Q ss_pred CHHHHHHHHHHHHh
Q 015894 275 TPGTVIPMLEAVLD 288 (398)
Q Consensus 275 ~P~~v~~lv~~l~~ 288 (398)
++.+-.++++.+..
T Consensus 444 t~~~nl~lL~~l~~ 457 (545)
T 2bmb_A 444 TWKQNLQIIRHIPI 457 (545)
T ss_dssp CHHHHHHHHHTHHH
T ss_pred ChHHHHHHHHHHHH
Confidence 24555666666553
No 263
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=88.38 E-value=2.2 Score=40.68 Aligned_cols=81 Identities=12% Similarity=0.076 Sum_probs=68.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhC-CCCeEEEEe-CCccchHHHHHHHHHHhCC
Q 015894 244 MVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAV-PVDKLAVHF-HDTYGQALSNILASLQMGI 318 (398)
Q Consensus 244 r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~l~~H~-Hnd~GlA~ANalaAl~aGa 318 (398)
..|.+.+.++++.+.+.|++.|.++-|.|- ++.++-.++++.+.+.. ..+++-+|. +|+..-++..+..|-++||
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Ga 98 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGA 98 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCC
Confidence 678899999999999999999999999996 45777778888888765 346777776 7899999999999999999
Q ss_pred CEEeec
Q 015894 319 STVDSS 324 (398)
Q Consensus 319 ~~VD~S 324 (398)
+.+=+.
T Consensus 99 davlv~ 104 (292)
T 3daq_A 99 DAIMLI 104 (292)
T ss_dssp SEEEEE
T ss_pred CEEEEC
Confidence 977654
No 264
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=88.29 E-value=5.9 Score=38.58 Aligned_cols=121 Identities=21% Similarity=0.199 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEeeeec--C-----------------CCC-----C-----CCCH-------HHHHH
Q 015894 209 EDSLIRYRDVALAARELSIPVRGYLSCVVG--C-----------------PVE-----G-----MVPP-------SKVAY 252 (398)
Q Consensus 209 ~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg--~-----------------~~~-----~-----r~~~-------~~l~~ 252 (398)
++.++..+++++.++++|-.+...|...-- . |-. + ..+. +.+.+
T Consensus 77 d~~i~~~~~~~~~vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~ 156 (349)
T 3hgj_A 77 EDHLPGLKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVE 156 (349)
T ss_dssp GGGHHHHHHHHHHHHHTTCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccCCccccccccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHHHH
Confidence 355677888899999999888777765310 0 000 0 1222 34455
Q ss_pred HHHHHHhCCCCEEEEc-------------------cCcCcCC---HHHHHHHHHHHHhhCC-CCeEEEEeCCc-------
Q 015894 253 VSKQLYDMGCSEISLG-------------------DTIGVGT---PGTVIPMLEAVLDAVP-VDKLAVHFHDT------- 302 (398)
Q Consensus 253 ~a~~l~~~Gad~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p-~~~l~~H~Hnd------- 302 (398)
.++.+.++|.|.|-|- |-.|... +.-+.++++++|+.++ +.+|++-..-+
T Consensus 157 aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~ 236 (349)
T 3hgj_A 157 GARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGW 236 (349)
T ss_dssp HHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSC
T ss_pred HHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC
Confidence 6777788999987663 3344322 2346889999999985 56788866632
Q ss_pred -cchHHHHHHHHHHhCCCEEeeccccCC
Q 015894 303 -YGQALSNILASLQMGISTVDSSVSGLG 329 (398)
Q Consensus 303 -~GlA~ANalaAl~aGa~~VD~Sv~GlG 329 (398)
..-++.-+...-++|++.|+++..+.-
T Consensus 237 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~ 264 (349)
T 3hgj_A 237 SLEDTLAFARRLKELGVDLLDCSSGGVV 264 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCcC
Confidence 222333344445789999999976553
No 265
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=88.24 E-value=9.6 Score=34.67 Aligned_cols=88 Identities=13% Similarity=0.117 Sum_probs=53.1
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCCCCeEEE--EeC-CccchHHHHH
Q 015894 237 VGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVPVDKLAV--HFH-DTYGQALSNI 310 (398)
Q Consensus 237 fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~l~~--H~H-nd~GlA~ANa 310 (398)
.+.|.... ..+.-..-++.+.+.|++.|-+.=-.|. ..+..+.+.++++++..+.+.+-+ ..- -|......-+
T Consensus 60 ~~~P~g~~-~~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv~vKvi~e~~~l~~~~~~~~a 138 (225)
T 1mzh_A 60 IGFPLGLN-KTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKAV 138 (225)
T ss_dssp ESTTTCCS-CHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTSEEEEECCGGGCCHHHHHHHH
T ss_pred ecCCCCcc-chhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCceEEEEEeCCCCCHHHHHHHH
Confidence 34465432 2333334467788899999885333343 356788888999998774222322 111 1112245557
Q ss_pred HHHHHhCCCEEeecc
Q 015894 311 LASLQMGISTVDSSV 325 (398)
Q Consensus 311 laAl~aGa~~VD~Sv 325 (398)
..+.++||+.|.++-
T Consensus 139 ~~a~eaGad~I~tst 153 (225)
T 1mzh_A 139 EICIEAGADFIKTST 153 (225)
T ss_dssp HHHHHHTCSEEECCC
T ss_pred HHHHHhCCCEEEECC
Confidence 778899999997666
No 266
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=88.09 E-value=2.5 Score=38.27 Aligned_cols=127 Identities=17% Similarity=0.129 Sum_probs=69.7
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeC----CH----------------
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTP----NL---------------- 175 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~----n~---------------- 175 (398)
++...-.+.++.+.++|++ ||+.... + .+.+..++.+..+...+ .+++..+ |.
T Consensus 7 ~p~~~l~~~l~~~~~~G~~-vEl~~~~-~----~~~~~~~~~~~~~~~~~-~~~~h~~~~~~~l~~~~~~~r~~~~~~~~ 79 (254)
T 3ayv_A 7 FPLSRAEEALPRLQALGLG-AEVYLDP-A----LLEEDALFQSLRRRFSG-KLSVHLPFWNLDLLSPDPEVRGLTLRRLL 79 (254)
T ss_dssp EEGGGHHHHHHHHHHHTCE-EEEECCG-G----GTTCHHHHHHHHHHCCS-CEEEECCCTTCCTTCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCC-EEEeccc-c----ccCcHHHHHHHHHHhCC-CeEEecCccCCCCCCCCHHHHHHHHHHHH
Confidence 3444556788888999999 9995321 1 11222233333343334 5555442 11
Q ss_pred hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 015894 176 KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSK 255 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~ 255 (398)
+.++.|.+.|++.|.+..............-..+...+.+.++.++|++.|+.+. +.. ....+++.+.++++
T Consensus 80 ~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--lEn------~~~~~~~~~~~l~~ 151 (254)
T 3ayv_A 80 FGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVRLL--LEN------SHEPHPEALRPVLE 151 (254)
T ss_dssp HHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCEEE--EEC------SSCSSGGGTHHHHH
T ss_pred HHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCEEE--EcC------CCCCCHHHHHHHHH
Confidence 1245677899999988654321100000001244566777888899999998764 331 11236666667666
Q ss_pred HH
Q 015894 256 QL 257 (398)
Q Consensus 256 ~l 257 (398)
.+
T Consensus 152 ~v 153 (254)
T 3ayv_A 152 AH 153 (254)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 267
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=88.08 E-value=3.5 Score=41.95 Aligned_cols=154 Identities=12% Similarity=0.131 Sum_probs=94.1
Q ss_pred CCEEEEecCCCCCcccCCCCHHHHHHHHHh---ccCCcEEEEeCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHH
Q 015894 133 LAVVEATSFVSPKWVPQLADAKDVMAAIQN---VEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIE 209 (398)
Q Consensus 133 v~~IEvG~~~~~~~~p~~~D~~~v~~~i~~---~~~~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~ 209 (398)
+|.|.+++.. .|++.+...++. ..+..++.. .+.+-++.+++.|.+.=-+..+++.
T Consensus 128 aD~I~l~~~~--------~dpe~~~~~Vk~V~e~~dvPlsID-~dp~vleaale~~~d~~pLIns~t~------------ 186 (445)
T 2h9a_A 128 VNLVALKGSS--------QDAATFAKAVATAREVTDLPFILI-GTPEQLAAALETEGANNPLLYAATA------------ 186 (445)
T ss_dssp CCEEEEECTT--------CCHHHHHHHHHHHHHHCCSCEEEE-SCHHHHHHHHHHHGGGCCEEEEECT------------
T ss_pred CcEEEEeCCC--------CCHHHHHHHHHHHHHhcCCCEEEE-CCHHHHHHHHHhcCCCCCEEEECCH------------
Confidence 8889998732 355555555553 346677766 8888899999988762222223332
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhh
Q 015894 210 DSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDA 289 (398)
Q Consensus 210 ~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~ 289 (398)
+++.++...|++.|..|.+ .+ + +.+.+.++.+.+.++|.+.|.| |... ..-....+-+..+|+.
T Consensus 187 ---en~~~~~~la~~y~~~vV~-----~~-~-----~l~~l~~lv~~a~~~Gi~~IiL-DP~~-~~~~~sl~~~~~IR~~ 250 (445)
T 2h9a_A 187 ---DNYEQMVELAKKYNVPLTV-----SA-K-----GLDALAELVQKITALGYKNLIL-DPQP-ENISEGLFYQTQIRRL 250 (445)
T ss_dssp ---TTHHHHHHHHHHHTCCEEE-----EC-S-----SHHHHHHHHHHHHHTTCCCEEE-ECCC-SSHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHhCCeEEE-----Ec-C-----CHHHHHHHHHHHHHCCCCcEEE-cCCc-hhHHHHHHHHHHHHHh
Confidence 2345667888899988753 21 1 5788999999999999987664 5442 2233444455555554
Q ss_pred C---CCC-----eEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 290 V---PVD-----KLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 290 ~---p~~-----~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
. ++. -+..-..-+--+-...+..++..|++++=+
T Consensus 251 al~~~d~~lg~P~i~~vs~~d~~~ea~lA~~~~~~GasIl~~ 292 (445)
T 2h9a_A 251 AIKKLFRPFGYPTIAFALDENPYQAVMEASVYIAKYAGIIVL 292 (445)
T ss_dssp HHHSCCGGGCSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred hhcCCCcccCCCeeecCCchhHHHHHHHHHHHHHcCCeEEEe
Confidence 1 221 133333323225555555568999997744
No 268
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=87.99 E-value=4.1 Score=38.26 Aligned_cols=171 Identities=16% Similarity=0.096 Sum_probs=100.9
Q ss_pred HHHHHHHhcC--CCEEEEecCCCCCcccCCCCHHHHHHHHHhc--cCCcEEE--------EeCC-Hhh-HHHHHHcCCCE
Q 015894 123 ELIKLLVSSG--LAVVEATSFVSPKWVPQLADAKDVMAAIQNV--EGARFPV--------LTPN-LKG-FEAAVAAGAKE 188 (398)
Q Consensus 123 ~ia~~L~~aG--v~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~--~~~~l~~--------l~~n-~~~-ie~a~~~Gv~~ 188 (398)
.+-..|.-+| ||.+-+|+..+. +.+.+.+.+.+... -++.+.. +.++ .++ ++.+.+.|.+.
T Consensus 27 ~~~d~Le~~g~yID~lKfg~Gt~~-----l~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~ 101 (251)
T 1qwg_A 27 FVEDYLKVCGDYIDFVKFGWGTSA-----VIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEA 101 (251)
T ss_dssp HHHHHHHHHGGGCSEEEECTTGGG-----GSCHHHHHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHhhhhcceEEecCceee-----ecCHHHHHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCE
Confidence 3445556666 888999875431 12233344444322 2333221 1233 223 57788899999
Q ss_pred EEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC---CCCCCHHHHHHHHHHHHhCCCCEE
Q 015894 189 VAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV---EGMVPPSKVAYVSKQLYDMGCSEI 265 (398)
Q Consensus 189 v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~---~~r~~~~~l~~~a~~l~~~Gad~I 265 (398)
|-|....-+. +. +.-.+.|+.+++.|++|-.. +|.-+ ....+++.+.+.++.-.++||+.|
T Consensus 102 iEiS~G~i~l--------~~----~~~~~~I~~~~~~G~~v~~E----vG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~V 165 (251)
T 1qwg_A 102 VEISDGSSDI--------SL----EERNNAIKRAKDNGFMVLTE----VGKKMPDKDKQLTIDDRIKLINFDLDAGADYV 165 (251)
T ss_dssp EEECCSSSCC--------CH----HHHHHHHHHHHHTTCEEEEE----ECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEE
T ss_pred EEECCCcccC--------CH----HHHHHHHHHHHHCCCEEeee----ccccCCcccCCCCHHHHHHHHHHHHHCCCcEE
Confidence 9997664332 22 33346789999999998533 34322 245789999999999999999876
Q ss_pred E-----------EccCcCcCCHHHHHHHHHH------------------HHhhC-CCCeEEEEeCCccchHHHHHHHHHH
Q 015894 266 S-----------LGDTIGVGTPGTVIPMLEA------------------VLDAV-PVDKLAVHFHDTYGQALSNILASLQ 315 (398)
Q Consensus 266 ~-----------L~DT~G~~~P~~v~~lv~~------------------l~~~~-p~~~l~~H~Hnd~GlA~ANalaAl~ 315 (398)
. |.|..|......+..+++. +.+++ |++.|+.=.|++ .-+|++++
T Consensus 166 iiEarEsG~~iGi~~~~g~~r~d~v~~i~~~l~~eklifEAp~k~qq~~fI~~fG~~VNLgNI~~~e-----Vi~LE~LR 240 (251)
T 1qwg_A 166 IIEGRESGKGKGLFDKEGKVKENELDVLAKNVDINKVIFEAPQKSQQVAFILKFGSSVNLANIAFDE-----VISLETLR 240 (251)
T ss_dssp EECCTTTCCSSTTBCTTSCBCHHHHHHHHTTSCGGGEEEECCSHHHHHHHHHHHCTTCCEEEEEGGG-----HHHHHHHH
T ss_pred EEeeecccCCcccCCCCCCCcHHHHHHHHHhCChhhEEEECCChHHHHHHHHHhCCCccccCCCHHH-----HHHHHHHH
Confidence 4 4455566666666555431 22223 566665434433 44566777
Q ss_pred hCCC
Q 015894 316 MGIS 319 (398)
Q Consensus 316 aGa~ 319 (398)
.|-+
T Consensus 241 ~GLr 244 (251)
T 1qwg_A 241 RGLR 244 (251)
T ss_dssp HTCS
T ss_pred cccc
Confidence 6654
No 269
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=87.99 E-value=8.5 Score=36.42 Aligned_cols=76 Identities=12% Similarity=0.135 Sum_probs=35.3
Q ss_pred HHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhC-CCCE--EEEccCcCcC-CHHHHHHHHHHHHhhCCC
Q 015894 217 DVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM-GCSE--ISLGDTIGVG-TPGTVIPMLEAVLDAVPV 292 (398)
Q Consensus 217 ~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~-Gad~--I~L~DT~G~~-~P~~v~~lv~~l~~~~p~ 292 (398)
+.++.|++.|.....-+ .|.-.+.+.+.+.+..+.+.+. +... -.++...|.- +|+.+.+ +. ..|+
T Consensus 87 ~la~~a~~~Gadavlv~-----~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~----La-~~pn 156 (291)
T 3tak_A 87 ELTKAAKDLGADAALLV-----TPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVR----LA-EIPN 156 (291)
T ss_dssp HHHHHHHHHTCSEEEEE-----CCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHH----HT-TSTT
T ss_pred HHHHHHHhcCCCEEEEc-----CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHH----HH-cCCC
Confidence 44566666676543111 3443445566666655555442 4333 2344444543 3333333 22 3565
Q ss_pred CeEEE-EeCCcc
Q 015894 293 DKLAV-HFHDTY 303 (398)
Q Consensus 293 ~~l~~-H~Hnd~ 303 (398)
+ +++ ..+.|.
T Consensus 157 i-vgiK~ssgd~ 167 (291)
T 3tak_A 157 I-VGIKDATGDV 167 (291)
T ss_dssp E-EEEEECSCCH
T ss_pred E-EEEEeCCCCH
Confidence 3 555 344444
No 270
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=87.95 E-value=13 Score=35.30 Aligned_cols=14 Identities=21% Similarity=0.138 Sum_probs=8.4
Q ss_pred CCCccHHHHHHHHH
Q 015894 338 SGNVATEDVVYMLN 351 (398)
Q Consensus 338 aGNa~lE~vv~~L~ 351 (398)
++|..-+.++...+
T Consensus 212 ~an~~P~~~~~l~~ 225 (297)
T 3flu_A 212 AANAAPKLFADMCR 225 (297)
T ss_dssp GGGTCHHHHHHHHH
T ss_pred hHhhhHHHHHHHHH
Confidence 55666666665554
No 271
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=87.94 E-value=4.1 Score=36.41 Aligned_cols=71 Identities=13% Similarity=0.267 Sum_probs=51.4
Q ss_pred HHHHHhCCCCEEEEccCcCcCCH-HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCC
Q 015894 254 SKQLYDMGCSEISLGDTIGVGTP-GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGG 330 (398)
Q Consensus 254 a~~l~~~Gad~I~L~DT~G~~~P-~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGe 330 (398)
++.+.++|++.|.+- +.-...| ..+.++++.+++.+|+.++.+-.|+ ...+..+.++|++.|-++..|...
T Consensus 81 i~~~~~~Gad~v~l~-~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t-----~~e~~~~~~~G~d~i~~~~~g~t~ 152 (223)
T 1y0e_A 81 VDELIESQCEVIALD-ATLQQRPKETLDELVSYIRTHAPNVEIMADIAT-----VEEAKNAARLGFDYIGTTLHGYTS 152 (223)
T ss_dssp HHHHHHHTCSEEEEE-CSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSS-----HHHHHHHHHTTCSEEECTTTTSST
T ss_pred HHHHHhCCCCEEEEe-eecccCcccCHHHHHHHHHHhCCCceEEecCCC-----HHHHHHHHHcCCCEEEeCCCcCcC
Confidence 455678999998774 3323345 5778999999999888777776664 345667889999999776665543
No 272
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=87.93 E-value=1.7 Score=39.92 Aligned_cols=71 Identities=14% Similarity=0.109 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEE--eCCHhhHHHHHHcCCCEEEEe
Q 015894 120 VKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVL--TPNLKGFEAAVAAGAKEVAIF 192 (398)
Q Consensus 120 ~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l--~~n~~~ie~a~~~Gv~~v~i~ 192 (398)
+-+++++.+.+.|++.|-+.-...... ....+. ++++.+++..++.+.+- .++.++++.+++.|++.|.+-
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~-~~~~~~-~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig 108 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDT-EMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSIN 108 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTC-SSCCCH-HHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCS
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccC-CCcccH-HHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehh
Confidence 457899999999999998864321110 011233 34445554335554443 357889999999999998874
No 273
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=87.92 E-value=15 Score=36.13 Aligned_cols=126 Identities=19% Similarity=0.192 Sum_probs=73.1
Q ss_pred HHHHHHHHhcCCCEEEEecCC-CCCcccCCCCHHHHHHHHH-hccCCcEEE-EeCCHhhHHHHHHcCCCEEEEeccC-c-
Q 015894 122 VELIKLLVSSGLAVVEATSFV-SPKWVPQLADAKDVMAAIQ-NVEGARFPV-LTPNLKGFEAAVAAGAKEVAIFASA-S- 196 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~-~~~~~p~~~D~~~v~~~i~-~~~~~~l~~-l~~n~~~ie~a~~~Gv~~v~i~~~~-S- 196 (398)
.+.++.|.++|++.|++.... .++ ...+.++.++ ..|+..+.+ -+.+.++.+.+.++|+|.|.+.... +
T Consensus 110 ~~~~~~lieaGvd~I~idta~G~~~------~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~ 183 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHGHSE------GVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSI 183 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSH------HHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTT
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCH------HHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCC
Confidence 566888999999999985422 211 1122333444 345665543 3567888999999999999983111 1
Q ss_pred -hHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcc
Q 015894 197 -ESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGD 269 (398)
Q Consensus 197 -d~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~D 269 (398)
-.+.....+.. .+..+.++.+.+++.+++|.+ +.+-.++..+.+ +.++||+.+.+.-
T Consensus 184 ~~tr~~~g~g~p---~~~~l~~v~~~~~~~~iPVIA---------~GGI~~~~di~k----ala~GAd~V~vGs 241 (366)
T 4fo4_A 184 CTTRIVTGVGVP---QITAIADAAGVANEYGIPVIA---------DGGIRFSGDISK----AIAAGASCVMVGS 241 (366)
T ss_dssp BCHHHHHCCCCC---HHHHHHHHHHHHGGGTCCEEE---------ESCCCSHHHHHH----HHHTTCSEEEEST
T ss_pred CCcccccCcccc---hHHHHHHHHHHHhhcCCeEEE---------eCCCCCHHHHHH----HHHcCCCEEEECh
Confidence 01111112222 244455666666677887742 234345655443 4458999887753
No 274
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=87.77 E-value=1.6 Score=39.76 Aligned_cols=200 Identities=16% Similarity=0.061 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCCEEEEecCCC----CCcccCCCCHHHHHHHHHhccCCcEEEEeCC-----------------HhhHHHH
Q 015894 123 ELIKLLVSSGLAVVEATSFVS----PKWVPQLADAKDVMAAIQNVEGARFPVLTPN-----------------LKGFEAA 181 (398)
Q Consensus 123 ~ia~~L~~aGv~~IEvG~~~~----~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~n-----------------~~~ie~a 181 (398)
+.++.+.++|++.||+..... .. .+.+++.+.+++ .+.++.++... .+.++.|
T Consensus 20 ~~l~~~~~~G~~~vEl~~~~~~~~~~~-----~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A 93 (281)
T 3u0h_A 20 LYLDLARETGYRYVDVPFHWLEAEAER-----HGDAAVEAMFQR-RGLVLANLGLPLNLYDSEPVFLRELSLLPDRARLC 93 (281)
T ss_dssp HHHHHHHHTTCSEECCCHHHHHHHHHH-----HCHHHHHHHHHT-TTCEECCEECCSCTTSCHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecHHHHHHHhcc-----cCHHHHHHHHHH-cCCceEEecccccccCCCHHHHHHHHHHHHHHHHH
Q ss_pred HHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEee----eecCCCCCCCCHHHHHHHHHHH
Q 015894 182 VAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSC----VVGCPVEGMVPPSKVAYVSKQL 257 (398)
Q Consensus 182 ~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~----~fg~~~~~r~~~~~l~~~a~~l 257 (398)
.+.|++.|.+.+.......... ..+...+.+.++.++|++.|+.+...-.. .+. +...-.+++.+.++++.+
T Consensus 94 ~~lG~~~v~~~~~p~~~~~~~~---~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~-~~~~~~~~~~~~~l~~~v 169 (281)
T 3u0h_A 94 ARLGARSVTAFLWPSMDEEPVR---YISQLARRIRQVAVELLPLGMRVGLEYVGPHHLRHR-RYPFVQSLADLKTFWEAI 169 (281)
T ss_dssp HHTTCCEEEEECCSEESSCHHH---HHHHHHHHHHHHHHHHGGGTCEEEEECCCCGGGCCS-SEECCCSHHHHHHHHHHH
T ss_pred HHcCCCEEEEeecCCCCCcchh---hHHHHHHHHHHHHHHHHHcCCEEEEEeccccccccc-cccccCCHHHHHHHHHHc
Q ss_pred HhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCC
Q 015894 258 YDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGA 337 (398)
Q Consensus 258 ~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~gr 337 (398)
+.+.+.++==+|.+.-.. .-+..+.+.+.+--.++|++|..+.. -+..+..-.-+|+
T Consensus 170 ---~~~~vg~~~D~~h~~~~g--~~~~~~~~~~~~~i~~vHl~D~~~~~-----------~~~~~~~~~~~G~------- 226 (281)
T 3u0h_A 170 ---GAPNVGALVDSYHWYTAG--EHEDDLAQLPPEKVVYVHINDTRDAP-----------EDAHDGKRLLPGD------- 226 (281)
T ss_dssp ---CCTTEEEEEEHHHHHHTT--CCHHHHHTSCGGGEEEEEECBCSSCT-----------TTCCTTSCBCTTS-------
T ss_pred ---CCCCeeEEeehhHHHHcC--CCHHHHHhcCcccEEEEEecCCCCCc-----------ccchhccCcCCCC-------
Q ss_pred CCCccHHHHHHHHHhCCCC
Q 015894 338 SGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 338 aGNa~lE~vv~~L~~~Gi~ 356 (398)
|..+...++..|++.|++
T Consensus 227 -G~id~~~~~~~L~~~gy~ 244 (281)
T 3u0h_A 227 -GRIPLVPFLRGLYLAGYR 244 (281)
T ss_dssp -SSSCHHHHHHHHHHHTCC
T ss_pred -cCcCHHHHHHHHHHcCCC
No 275
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=87.71 E-value=2.4 Score=41.08 Aligned_cols=117 Identities=15% Similarity=0.061 Sum_probs=77.7
Q ss_pred HHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCE-EEEccCcCcCCHHHHHHHHHHHHhhCCCC
Q 015894 215 YRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSE-ISLGDTIGVGTPGTVIPMLEAVLDAVPVD 293 (398)
Q Consensus 215 ~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~-I~L~DT~G~~~P~~v~~lv~~l~~~~p~~ 293 (398)
.+++.+.|++.|+-|-+ +. -.+.+.+..+++.+.+.+... |.+.-...-..+..+...+..+.+++ .+
T Consensus 15 ~~~ll~~A~~~~yAV~A-fN---------v~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~-~V 83 (306)
T 3pm6_A 15 ALPLLTFARTHSFAIPA-IC---------VYNLEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAA-SV 83 (306)
T ss_dssp SHHHHHHHHHTTCCEEE-EE---------CSSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHC-SS
T ss_pred HHHHHHHHHHCCcEEEE-Ee---------eCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHC-CC
Confidence 45678899999998742 22 136788999999999999885 44432111111223344455555554 35
Q ss_pred eEEEEeCCccchHHHHHHHHHHh--------CCC--EEeeccccCCCCCCCCCCCCCc-cHHHHHHHHHhC
Q 015894 294 KLAVHFHDTYGQALSNILASLQM--------GIS--TVDSSVSGLGGCPYAKGASGNV-ATEDVVYMLNGL 353 (398)
Q Consensus 294 ~l~~H~Hnd~GlA~ANalaAl~a--------Ga~--~VD~Sv~GlGecp~a~graGNa-~lE~vv~~L~~~ 353 (398)
|+.+|. |.|.....+..|+++ |.+ ++|+|-..+-+ |. -|.+++...+..
T Consensus 84 PVaLHl--DHg~~~e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p~eE---------Ni~~Tk~vv~~ah~~ 143 (306)
T 3pm6_A 84 PITLHL--DHAQDPEIIKRAADLSRSETHEPGFDSIMVDMSHFSKEE---------NLRLTRELVAYCNAR 143 (306)
T ss_dssp CEEEEE--EEECCHHHHHHHHHTC------CCCSEEEECCTTSCHHH---------HHHHHHHHHHHHHTT
T ss_pred CEEEEc--CCCCCHHHHHHHHHhhhhccCCCCCCEEEEeCCCCCHHH---------HHHHHHHHHHHHHHc
Confidence 677665 555556678999999 998 77999998877 65 566777777643
No 276
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=87.70 E-value=2.4 Score=40.86 Aligned_cols=82 Identities=16% Similarity=0.050 Sum_probs=68.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhC-CCCeEEEEe-CCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAV-PVDKLAVHF-HDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~l~~H~-Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|= +++++-.++++.+.+.. ..++|-++. +|+..-++..+..|-++|
T Consensus 39 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~G 118 (314)
T 3qze_A 39 GRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGG 118 (314)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999996 56788888888887765 345677764 688999999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 119 adavlv~ 125 (314)
T 3qze_A 119 ADACLLV 125 (314)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9977554
No 277
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=87.62 E-value=8.4 Score=35.27 Aligned_cols=107 Identities=21% Similarity=0.236 Sum_probs=69.7
Q ss_pred eeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcC---CHHHHHHHHHHHHhhCCC--Ce--EEEEeCCccchH
Q 015894 234 SCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVG---TPGTVIPMLEAVLDAVPV--DK--LAVHFHDTYGQA 306 (398)
Q Consensus 234 ~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~---~P~~v~~lv~~l~~~~p~--~~--l~~H~Hnd~GlA 306 (398)
+.+.|.|.. ..+.+....-++.+.+.|||.|-+.=-.|.+ .-..+.+-+..+++..+. ++ |+.-..++--.
T Consensus 58 ~~vigFP~G-~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i- 135 (220)
T 1ub3_A 58 VTVVGFPLG-YQEKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEI- 135 (220)
T ss_dssp EEEESTTTC-CSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHH-
T ss_pred EEEecCCCC-CCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHH-
Confidence 333455654 3455655556788889999999887777754 567788888888876532 22 33333343333
Q ss_pred HHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q 015894 307 LSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLN 351 (398)
Q Consensus 307 ~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~ 351 (398)
.-.+..|.++|||+|=+|- |. .+|++..|++-.+.+
T Consensus 136 ~~a~~ia~eaGADfVKTsT-Gf--------~~~gat~~dv~~m~~ 171 (220)
T 1ub3_A 136 ARLAEAAIRGGADFLKTST-GF--------GPRGASLEDVALLVR 171 (220)
T ss_dssp HHHHHHHHHHTCSEEECCC-SS--------SSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEeCC-CC--------CCCCCCHHHHHHHHH
Confidence 3456677899999999986 22 235677777776665
No 278
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=87.62 E-value=11 Score=36.17 Aligned_cols=15 Identities=20% Similarity=0.248 Sum_probs=9.3
Q ss_pred CCCccHHHHHHHHHh
Q 015894 338 SGNVATEDVVYMLNG 352 (398)
Q Consensus 338 aGNa~lE~vv~~L~~ 352 (398)
++|..-+.++...+.
T Consensus 228 ~an~~P~~~~~l~~a 242 (314)
T 3qze_A 228 TANVAPRAMSDLCAA 242 (314)
T ss_dssp GGGTCHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHH
Confidence 556666766665553
No 279
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=87.60 E-value=1.4 Score=39.91 Aligned_cols=72 Identities=19% Similarity=0.202 Sum_probs=52.1
Q ss_pred HHHHHHHhCCCCEEEEccCcCcCCH--HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCC
Q 015894 252 YVSKQLYDMGCSEISLGDTIGVGTP--GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLG 329 (398)
Q Consensus 252 ~~a~~l~~~Gad~I~L~DT~G~~~P--~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlG 329 (398)
+.++.+.++|++.|.+-=. -...| ..+.++++.+++.+|+.++.+-.|+- ..+..+.++|+++|..++.|+.
T Consensus 92 ~~i~~~~~~Gad~V~l~~~-~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~-----~ea~~a~~~Gad~i~~~v~g~~ 165 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCT-KRDRHDGLDIASFIRQVKEKYPNQLLMADISTF-----DEGLVAHQAGIDFVGTTLSGYT 165 (234)
T ss_dssp HHHHHHHTTTCSEEEEECC-SSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSH-----HHHHHHHHTTCSEEECTTTTSS
T ss_pred HHHHHHHHcCCCEEEEccc-ccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCH-----HHHHHHHHcCCCEEeeeccccC
Confidence 3466778899998865322 12234 35688999999988877787777752 3478899999999976777763
No 280
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=87.59 E-value=3.6 Score=39.39 Aligned_cols=82 Identities=15% Similarity=0.167 Sum_probs=68.6
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCC-CCeEEEEe-CCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVP-VDKLAVHF-HDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~l~~H~-Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.| .+++++-.++++.+.+... .++|-++. +|+..-++..+..|-++|
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 106 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYG 106 (303)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999998 5678888888888887653 46777765 567788899999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 107 adavlv~ 113 (303)
T 2wkj_A 107 FDAVSAV 113 (303)
T ss_dssp CSEEEEE
T ss_pred CCEEEec
Confidence 9977554
No 281
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=87.58 E-value=8.6 Score=37.12 Aligned_cols=144 Identities=15% Similarity=0.053 Sum_probs=80.1
Q ss_pred hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeee--ecCCCC------CC-CC
Q 015894 176 KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCV--VGCPVE------GM-VP 246 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~--fg~~~~------~r-~~ 246 (398)
++++.+.++|+..||+-+-+++. -+. ..++.+.++++.||++|++|...+-+. +..|-. -. .+
T Consensus 31 ~~~~ilk~~G~n~vRlri~v~P~-----~g~---~d~~~~~~~~~~ak~~Gl~v~ld~hysd~wadP~~q~~p~~W~~~~ 102 (334)
T 1fob_A 31 ALETILADAGINSIRQRVWVNPS-----DGS---YDLDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTD 102 (334)
T ss_dssp CHHHHHHHHTCCEEEEEECSCCT-----TCT---TCHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTSCSSC
T ss_pred hHHHHHHHcCCCEEEEEEEECCC-----CCc---cCHHHHHHHHHHHHHCCCEEEEEeccCCCCCCcccccCccccccCC
Confidence 46778889999998885443332 011 126677888999999999987655321 222210 00 12
Q ss_pred H--------HHHHHHHHHHHhCC--CCEEEEcc--CcCcCC-------HHHHHHH----HHHHHhhC--CCCeEEEEeCC
Q 015894 247 P--------SKVAYVSKQLYDMG--CSEISLGD--TIGVGT-------PGTVIPM----LEAVLDAV--PVDKLAVHFHD 301 (398)
Q Consensus 247 ~--------~~l~~~a~~l~~~G--ad~I~L~D--T~G~~~-------P~~v~~l----v~~l~~~~--p~~~l~~H~Hn 301 (398)
. ++..++++.+.+.| ++.+.+.. +.|.+- ...+..+ ++++|+.. |..++.+|+.+
T Consensus 103 ~~~~~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~v~~h~~~ 182 (334)
T 1fob_A 103 LGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDD 182 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESC
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCeEEEEcCC
Confidence 2 12334556666666 56775554 234442 2344443 34577777 87789999987
Q ss_pred ccchHHHH--HHHHHHhC------CCEEeecccc
Q 015894 302 TYGQALSN--ILASLQMG------ISTVDSSVSG 327 (398)
Q Consensus 302 d~GlA~AN--alaAl~aG------a~~VD~Sv~G 327 (398)
-...+.-+ ...+...| .|+|-.+...
T Consensus 183 ~~~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp 216 (334)
T 1fob_A 183 GWSWDQQNYFYETVLATGELLSTDFDYFGVSYYP 216 (334)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCS
T ss_pred cCchHHHHHHHHHHHHcCCCCCCCcCEEEEeCCC
Confidence 32211111 12234556 3666666554
No 282
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=87.56 E-value=14 Score=33.33 Aligned_cols=219 Identities=14% Similarity=0.131 Sum_probs=114.1
Q ss_pred ccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCC--Cc---c-cCCCCH---HHHHHHHHhccCCc
Q 015894 97 FVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSP--KW---V-PQLADA---KDVMAAIQNVEGAR 167 (398)
Q Consensus 97 ~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~--~~---~-p~~~D~---~~v~~~i~~~~~~~ 167 (398)
++-+.--|+|+ ++ -.+.++.+.++|++.||+...... .+ . +...+. +++.+.++ -.+++
T Consensus 11 klg~~~~~~~~--------~~---~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gl~ 78 (262)
T 3p6l_A 11 RLGMQSYSFHL--------FP---LTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAA-SKGIK 78 (262)
T ss_dssp EEEEEGGGGTT--------SC---HHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHH-HTTCE
T ss_pred EEEEEecccCC--------CC---HHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHH-HcCCe
Confidence 46666667765 23 345777888999999999753210 00 0 111222 33333333 23666
Q ss_pred EEEEeC----CH----hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC
Q 015894 168 FPVLTP----NL----KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGC 239 (398)
Q Consensus 168 l~~l~~----n~----~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~ 239 (398)
+.++.. .. +.++.|.+.|++.|.+... . +. +..+.++|++.|+.+. +...
T Consensus 79 i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~-~-------------~~---~~~l~~~a~~~gv~l~--~En~--- 136 (262)
T 3p6l_A 79 IVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPA-L-------------SD---WDLVEKLSKQYNIKIS--VHNH--- 136 (262)
T ss_dssp EEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCC-G-------------GG---HHHHHHHHHHHTCEEE--EECC---
T ss_pred EEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCC-H-------------HH---HHHHHHHHHHhCCEEE--EEeC---
Confidence 666542 22 3467788899999998632 1 12 3466788899998764 3321
Q ss_pred CCCCC-CCHHHHHHHHHHHHhCCCCEE-EEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhC
Q 015894 240 PVEGM-VPPSKVAYVSKQLYDMGCSEI-SLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMG 317 (398)
Q Consensus 240 ~~~~r-~~~~~l~~~a~~l~~~Gad~I-~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aG 317 (398)
+.... .+++.+.++++ + +.+.+ ..-||.=...-. .+....+++ +.+--.++|++|..--. .|
T Consensus 137 ~~~~~~~~~~~~~~ll~---~-~~~~~g~~~D~~h~~~~g--~d~~~~l~~-~~~~i~~vH~~D~~~~~---------~~ 200 (262)
T 3p6l_A 137 PQPSDYWKPENLLKAIS---G-RSQSLGSCSDVGHWRREG--LNQIDCLKQ-LKGRIISLHFKDIAPKK---------AG 200 (262)
T ss_dssp SSSSSSSSHHHHHHHHT---T-SCTTEEEEEEHHHHHHTT--CCHHHHHHH-TTTCEEEEEECEECCCC---------TT
T ss_pred CCccccCCHHHHHHHHH---h-CCCceEEEechHHHHhcC--CCHHHHHHH-HhhhheEEeeccCCccc---------cC
Confidence 11111 25666666654 2 33323 233543211100 012333333 33334788999975110 01
Q ss_pred CCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCCC----cc------ChHHHHHHHHHHHHHh
Q 015894 318 ISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRT----NV------DIRKLMIAGDFICKHL 375 (398)
Q Consensus 318 a~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~t----~i------Dl~~L~~~~~~v~~~~ 375 (398)
.... ..+| + +.|..+...++..|++.|++- .+ ..+.+....+++.+.+
T Consensus 201 ~~~~-------~~~~--~-G~G~id~~~~~~~l~~~gy~g~~~~E~~~~~~~~~~~~~~s~~~l~~~l 258 (262)
T 3p6l_A 201 ENEQ-------HDVI--W-GTGILDVKGMLKELKSQNFKGVFSIEYEYNWENSVPDIKECIQYFNKTA 258 (262)
T ss_dssp CSCC-------CEEC--T-TSSSSCHHHHHHHHHHTTCCEEEEECCCSSTTSCHHHHHHHHHHHHHHH
T ss_pred cCcc-------ccCC--C-CCCccCHHHHHHHHHHCCCCeEEEEEeccCcCChHHHHHHHHHHHHHHH
Confidence 1100 0011 1 368999999999999877641 12 2345555555555544
No 283
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=87.55 E-value=24 Score=35.10 Aligned_cols=126 Identities=13% Similarity=0.088 Sum_probs=70.0
Q ss_pred hhHHHHHHcCCCEEEEeccCchHHHh-hhc--CCCHHHHHHHHHHHHHHHHhCCCcEEEEEeee--ecCCCC------CC
Q 015894 176 KGFEAAVAAGAKEVAIFASASESFSK-SNI--NCTIEDSLIRYRDVALAARELSIPVRGYLSCV--VGCPVE------GM 244 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~Sd~~~~-~~~--~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~--fg~~~~------~r 244 (398)
..++...++|+..||+-+-+.+.-.. ..+ +. ..++.+..+++.||++|++|...+-+. +..|-. -.
T Consensus 52 d~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~---~d~~~~~~~a~~Ak~~GLkVlldfHysD~WadPg~Q~~P~aW~ 128 (399)
T 1ur4_A 52 DIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGN---NDLEKAIQIGKRATANGMKLLADFHYSDFWADPAKQKAPKAWA 128 (399)
T ss_dssp CHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTC---CCHHHHHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCCCGGGT
T ss_pred hHHHHHHHCCCCEEEEeeecCCcccccCccCCCC---CCHHHHHHHHHHHHHCCCEEEEEeccCCccCCcccccCccccc
Confidence 35677788999999875444332000 000 11 125667788999999999987554321 101110 00
Q ss_pred -CCHH--------HHHHHHHHHHhCCC--CEEEEcc-Cc-Cc---CCHHHHHHH----HHHHHhhCCCCeEEEEeCCccc
Q 015894 245 -VPPS--------KVAYVSKQLYDMGC--SEISLGD-TI-GV---GTPGTVIPM----LEAVLDAVPVDKLAVHFHDTYG 304 (398)
Q Consensus 245 -~~~~--------~l~~~a~~l~~~Ga--d~I~L~D-T~-G~---~~P~~v~~l----v~~l~~~~p~~~l~~H~Hnd~G 304 (398)
.+.+ +..++++.+.+.|+ +.|.+.. +. |. .....+..+ ++++|+..|..+|-+|..+-..
T Consensus 129 ~~~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~ 208 (399)
T 1ur4_A 129 NLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPET 208 (399)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCcc
Confidence 1222 33345666777775 4565543 21 22 224554444 5778888898888888866543
No 284
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=87.55 E-value=18 Score=33.49 Aligned_cols=108 Identities=24% Similarity=0.245 Sum_probs=71.1
Q ss_pred eeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCCCCeEEE----Ee----CCcc
Q 015894 235 CVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVPVDKLAV----HF----HDTY 303 (398)
Q Consensus 235 ~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~l~~----H~----Hnd~ 303 (398)
.+.|.|. +..+.+.-..-++.+.+.|||.|-+.=-.|. ..-..+.+-+..+++..++.++=+ .. |++-
T Consensus 68 tVigFP~-G~~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~e 146 (231)
T 3ndo_A 68 AVAGFPS-GKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEP 146 (231)
T ss_dssp EEESTTT-CCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHH
T ss_pred EEecCCC-CCCcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHH
Confidence 3345674 4445554455577888899999988877887 566778888888888765433221 11 1222
Q ss_pred chHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q 015894 304 GQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNG 352 (398)
Q Consensus 304 GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~ 352 (398)
.=...+..|.++||++|=+|- |.+. +|++..|++-.+.+.
T Consensus 147 -ei~~a~~ia~~aGADfVKTST-Gf~~-------~~gAt~edv~lm~~~ 186 (231)
T 3ndo_A 147 -LLADVCRVARDAGADFVKTST-GFHP-------SGGASVQAVEIMART 186 (231)
T ss_dssp -HHHHHHHHHHHTTCSEEECCC-SCCT-------TCSCCHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHCcCEEEcCC-CCCC-------CCCCCHHHHHHHHHH
Confidence 223455677899999998885 3331 457788888777663
No 285
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=87.51 E-value=4.4 Score=36.94 Aligned_cols=156 Identities=12% Similarity=-0.042 Sum_probs=85.7
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe------C--C-----HhhHHHHHHcCCCE
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT------P--N-----LKGFEAAVAAGAKE 188 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~------~--n-----~~~ie~a~~~Gv~~ 188 (398)
.+.++.+.++|++.||+...... +. .+.+++.+.+++ .+.++.... . . .+.++.|.+.|++.
T Consensus 26 ~~~l~~a~~~G~~~vEl~~~~~~---~~-~~~~~~~~~l~~-~gl~i~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~ 100 (264)
T 1yx1_A 26 ASFLPLLAMAGAQRVELREELFA---GP-PDTEALTAAIQL-QGLECVFSSPLELWREDGQLNPELEPTLRRAEACGAGW 100 (264)
T ss_dssp GGGHHHHHHHTCSEEEEEGGGCS---SC-CCHHHHHHHHHH-TTCEEEEEEEEEEECTTSSBCTTHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEEEHHhcC---CC-HHHHHHHHHHHH-cCCEEEEecchhhcCCchhHHHHHHHHHHHHHHcCCCE
Confidence 35778889999999999753111 11 145666666653 234333221 1 1 13467778899999
Q ss_pred EEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 015894 189 VAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLG 268 (398)
Q Consensus 189 v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~ 268 (398)
|.+....... .+ .+..+.++|++.|+.+. +... +...-.+++.+.++++.+.+.+.+.=..-
T Consensus 101 v~~~~g~~~~----------~~---~l~~l~~~a~~~Gv~l~--lEn~---~~~~~~~~~~~~~ll~~v~~~~~~vg~~~ 162 (264)
T 1yx1_A 101 LKVSLGLLPE----------QP---DLAALGRRLARHGLQLL--VEND---QTPQGGRIEVLERFFRLAERQQLDLAMTF 162 (264)
T ss_dssp EEEEEECCCS----------SC---CHHHHHHHHTTSSCEEE--EECC---SSHHHHCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEecCCCCc----------HH---HHHHHHHHHHhcCCEEE--EecC---CCCCCCCHHHHHHHHHHHHhcCCCeEEEE
Confidence 9886542110 01 45567788888897654 3211 00001246677777776655565532345
Q ss_pred cCcCcC-CHHHHHHHHHHHHhhCCCCeEEEEeCCccc
Q 015894 269 DTIGVG-TPGTVIPMLEAVLDAVPVDKLAVHFHDTYG 304 (398)
Q Consensus 269 DT~G~~-~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~G 304 (398)
||.-.. ......+.++.+..+ -.++|++|..+
T Consensus 163 D~g~~~~~~~d~~~~~~~~~~~----i~~vHlkD~~~ 195 (264)
T 1yx1_A 163 DIGNWRWQEQAADEAALRLGRY----VGYVHCKAVIR 195 (264)
T ss_dssp ETTGGGGGTCCHHHHHHHHGGG----EEEEEECEEEE
T ss_pred ehhhhhhcCCCHHHHHHHhhhh----EEEEEeecccC
Confidence 883222 123334444444332 37889888754
No 286
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=87.45 E-value=3.7 Score=39.08 Aligned_cols=82 Identities=16% Similarity=0.199 Sum_probs=69.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCC-CCeEEE-EeCCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVP-VDKLAV-HFHDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~l~~-H~Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|= +++++-.++++.+.+... .+++-+ -++|+..-++..+..|-++|
T Consensus 19 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 98 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAG 98 (294)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999986 778888889998887764 355555 45678888999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 99 adavlv~ 105 (294)
T 3b4u_A 99 ARNILLA 105 (294)
T ss_dssp CSEEEEC
T ss_pred CCEEEEc
Confidence 9977554
No 287
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=87.44 E-value=4.3 Score=38.96 Aligned_cols=207 Identities=14% Similarity=0.139 Sum_probs=118.0
Q ss_pred HHHHHHhcCCCEEEEecC-C--CCCcccC--CCCHHHHHHHHHhcc-CCcEEEEe--C-----CH----hhHHHHHHcCC
Q 015894 124 LIKLLVSSGLAVVEATSF-V--SPKWVPQ--LADAKDVMAAIQNVE-GARFPVLT--P-----NL----KGFEAAVAAGA 186 (398)
Q Consensus 124 ia~~L~~aGv~~IEvG~~-~--~~~~~p~--~~D~~~v~~~i~~~~-~~~l~~l~--~-----n~----~~ie~a~~~Gv 186 (398)
-++.++++|++.|=+|.. . +....|. .-+.++++..++.+. .+.+.+++ + +. +-+++..++|+
T Consensus 29 sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa 108 (295)
T 1xg4_A 29 HALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGA 108 (295)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHHHHHHHHcCC
Confidence 366778899999999854 1 1122232 235667776666432 12222332 1 22 23456678999
Q ss_pred CEEEEeccCchH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCC
Q 015894 187 KEVAIFASASES---FSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCS 263 (398)
Q Consensus 187 ~~v~i~~~~Sd~---~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad 263 (398)
..|.|-....+- |..-+-=.+.++..++++.+++.+..-++.+.+--- ++ .....+...+-++.+.++|||
T Consensus 109 ~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtd-a~-----~~~gl~~ai~ra~ay~eAGAd 182 (295)
T 1xg4_A 109 AGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTD-AL-----AVEGLDAAIERAQAYVEAGAE 182 (295)
T ss_dssp SEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEEC-CH-----HHHCHHHHHHHHHHHHHTTCS
T ss_pred eEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecH-Hh-----hhcCHHHHHHHHHHHHHcCCC
Confidence 999998876321 100000124667777776666554433454442110 00 011236777788889999999
Q ss_pred EEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEe--CCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCc
Q 015894 264 EISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHF--HDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNV 341 (398)
Q Consensus 264 ~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~--Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa 341 (398)
.|.+. |.-+++.+.++.+.+. .| +-+-. .+.... -+.-.--+.|+++|-....++ |+-+.
T Consensus 183 ~i~~e---~~~~~~~~~~i~~~~~--iP---~~~N~~~~g~~p~--~~~~eL~~~G~~~v~~~~~~~--------~aa~~ 244 (295)
T 1xg4_A 183 MLFPE---AITELAMYRQFADAVQ--VP---ILANITEFGATPL--FTTDELRSAHVAMALYPLSAF--------RAMNR 244 (295)
T ss_dssp EEEET---TCCSHHHHHHHHHHHC--SC---BEEECCSSSSSCC--CCHHHHHHTTCSEEEESSHHH--------HHHHH
T ss_pred EEEEe---CCCCHHHHHHHHHHcC--CC---EEEEecccCCCCC--CCHHHHHHcCCCEEEEChHHH--------HHHHH
Confidence 99986 3334667777666653 34 32211 111111 122344478999998877766 56688
Q ss_pred cHHHHHHHHHhCC
Q 015894 342 ATEDVVYMLNGLG 354 (398)
Q Consensus 342 ~lE~vv~~L~~~G 354 (398)
++++++..+++.|
T Consensus 245 a~~~~~~~i~~~g 257 (295)
T 1xg4_A 245 AAEHVYNVLRQEG 257 (295)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhC
Confidence 8888888887654
No 288
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=87.43 E-value=12 Score=34.45 Aligned_cols=144 Identities=18% Similarity=0.158 Sum_probs=85.8
Q ss_pred HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhC--CCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 015894 178 FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAAREL--SIPVRGYLSCVVGCPVEGMVPPSKVAYVSK 255 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~--G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~ 255 (398)
++.|.+.|+.-|.+. +.+ +..+++. |+. ++.+.|.|... .+.+.-..-++
T Consensus 23 ~~~A~~~~~~aVcv~----p~~-------------------v~~a~~~l~gv~----v~tvigFP~G~-~~~~~k~~E~~ 74 (226)
T 1vcv_A 23 ARKAEELGVAAYCVN----PIY-------------------APVVRPLLRKVK----LCVVADFPFGA-LPTASRIALVS 74 (226)
T ss_dssp HHHHHHHTCSEEEEC----GGG-------------------HHHHGGGCSSSE----EEEEESTTTCC-SCHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEC----HHH-------------------HHHHHHHhCCCe----EEEEeCCCCCC-CchHHHHHHHH
Confidence 356777899888874 222 3344432 322 44455667544 45554444466
Q ss_pred HHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCCC--Ce--EEEEeCCccchHHHHHHHHHHhCCCEEeeccccC
Q 015894 256 QLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVPV--DK--LAVHFHDTYGQALSNILASLQMGISTVDSSVSGL 328 (398)
Q Consensus 256 ~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p~--~~--l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~Gl 328 (398)
. .+.||+.|-+.=-.| ...-..+.+-+..+++..+. ++ |+.-.=++- .=.-.+..|+++||++|=+|- |.
T Consensus 75 ~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~e-ei~~a~~ia~eaGADfVKTST-Gf 151 (226)
T 1vcv_A 75 R-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDE-ERYTLYDIIAEAGAHFIKSST-GF 151 (226)
T ss_dssp H-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHH-HHHHHHHHHHHHTCSEEECCC-SC
T ss_pred H-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCHH-HHHHHHHHHHHcCCCEEEeCC-CC
Confidence 6 889999998888788 45567788888888887643 22 222111222 233456678899999999985 33
Q ss_pred CCCCCC--CCCCCCccHHHHHHHHHh
Q 015894 329 GGCPYA--KGASGNVATEDVVYMLNG 352 (398)
Q Consensus 329 Gecp~a--~graGNa~lE~vv~~L~~ 352 (398)
+.=-|+ .|-+|++..|++-.+.+.
T Consensus 152 ~~~~~~~~~~~~~gAt~~dv~lm~~~ 177 (226)
T 1vcv_A 152 AEEAYAARQGNPVHSTPERAAAIARY 177 (226)
T ss_dssp CCHHHHHHTTCCSSCCHHHHHHHHHH
T ss_pred CccccccccCCCCCCCHHHHHHHHHH
Confidence 200000 001568888888766654
No 289
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=87.41 E-value=2 Score=41.50 Aligned_cols=99 Identities=12% Similarity=0.013 Sum_probs=76.6
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCC-CCeEEEEeCCccchHHHHHHHHHHhCC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVP-VDKLAVHFHDTYGQALSNILASLQMGI 318 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~l~~H~Hnd~GlA~ANalaAl~aGa 318 (398)
+..|.+.+.++++.+.+.|++.|.++-|+|- ++.++-.++++.+.+... .++|-++.-++..-++..+..|-++||
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Ga 107 (316)
T 3e96_A 28 GSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGA 107 (316)
T ss_dssp CCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999985 567788888888887653 467777765688888999999999999
Q ss_pred CEEeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q 015894 319 STVDSSVSGLGGCPYAKGASGNVATEDVVYMLN 351 (398)
Q Consensus 319 ~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~ 351 (398)
+.+=+. .||-. .++-++++..++
T Consensus 108 davlv~------~P~y~----~~s~~~l~~~f~ 130 (316)
T 3e96_A 108 DAVMIH------MPIHP----YVTAGGVYAYFR 130 (316)
T ss_dssp SEEEEC------CCCCS----CCCHHHHHHHHH
T ss_pred CEEEEc------CCCCC----CCCHHHHHHHHH
Confidence 977543 34321 234566666664
No 290
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=87.35 E-value=8.4 Score=40.54 Aligned_cols=140 Identities=16% Similarity=0.073 Sum_probs=85.9
Q ss_pred HHHHHHcCCCEEEEeccC--------chH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-C--CcEEEEEeeeecCCCCCC
Q 015894 178 FEAAVAAGAKEVAIFASA--------SES--FSKSNINCTIEDSLIRYRDVALAAREL-S--IPVRGYLSCVVGCPVEGM 244 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~--------Sd~--~~~~~~~~s~~~~l~~~~~~v~~ak~~-G--~~v~~~l~~~fg~~~~~r 244 (398)
.+++.++|.|.|.|..+- |+. +....+|-+.++-.+.+.++++.+|+. | +.+.+-++..- . ..+.
T Consensus 147 A~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~-~-~~~g 224 (671)
T 1ps9_A 147 AQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLD-L-VEDG 224 (671)
T ss_dssp HHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEEC-C-STTC
T ss_pred HHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccc-c-CCCC
Confidence 346678999999885431 121 122345667777777788888888764 3 44444444321 1 1223
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEc----cC----cCc-CCHHHHHHHHHHHHhhCCCCeEEEEeCCccch-HHHHHHHHH
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLG----DT----IGV-GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQ-ALSNILASL 314 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~----DT----~G~-~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~Gl-A~ANalaAl 314 (398)
.+.+...++++.+.++|++.|.+. +. ... ..|....++++.+++.+. +||..=. |. -..++..++
T Consensus 225 ~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-iPvi~~G----gi~~~~~a~~~l 299 (671)
T 1ps9_A 225 GTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVS-LPLVTTN----RINDPQVADDIL 299 (671)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCS-SCEEECS----SCCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcC-ceEEEeC----CCCCHHHHHHHH
Confidence 578889999999999999999874 11 000 111233467888888764 3454422 22 356778888
Q ss_pred HhC-CCEEeec
Q 015894 315 QMG-ISTVDSS 324 (398)
Q Consensus 315 ~aG-a~~VD~S 324 (398)
+.| ||.|-..
T Consensus 300 ~~g~aD~V~~g 310 (671)
T 1ps9_A 300 SRGDADMVSMA 310 (671)
T ss_dssp HTTSCSEEEES
T ss_pred HcCCCCEEEeC
Confidence 998 8877543
No 291
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=87.28 E-value=8.1 Score=37.03 Aligned_cols=210 Identities=11% Similarity=0.115 Sum_probs=119.4
Q ss_pred HHHHHHhcCCCEEEEecC-CC-CCcccCC--CCHHHHHHHHHhcc-CCcEEEEe--C----CH----hhHHHHHHcCCCE
Q 015894 124 LIKLLVSSGLAVVEATSF-VS-PKWVPQL--ADAKDVMAAIQNVE-GARFPVLT--P----NL----KGFEAAVAAGAKE 188 (398)
Q Consensus 124 ia~~L~~aGv~~IEvG~~-~~-~~~~p~~--~D~~~v~~~i~~~~-~~~l~~l~--~----n~----~~ie~a~~~Gv~~ 188 (398)
-++.++++|++.|=+|.. .+ ....|.. -+.++++..++.+. .+.+.+++ + +. +-+++..++|+.-
T Consensus 31 sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaag 110 (295)
T 1s2w_A 31 SARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYGNFNNARRLVRKLEDRGVAG 110 (295)
T ss_dssp HHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCSSCEEEECCSSCSSHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCCCHHHHHHHHHHHHHcCCcE
Confidence 356678899999999842 11 1112211 13355665555432 22333333 2 21 2355667899999
Q ss_pred EEEeccCchH---HHh--hhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCC
Q 015894 189 VAIFASASES---FSK--SNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCS 263 (398)
Q Consensus 189 v~i~~~~Sd~---~~~--~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad 263 (398)
|+|-..+.+- |.. .+-=.+.++..++++.+++....-++.+.+--- ++ . .....+..++-++.+.++|||
T Consensus 111 v~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtd-a~---~-a~~g~~~ai~Ra~ay~eAGAd 185 (295)
T 1s2w_A 111 ACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVE-AF---I-AGWGLDEALKRAEAYRNAGAD 185 (295)
T ss_dssp EEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEEC-TT---T-TTCCHHHHHHHHHHHHHTTCS
T ss_pred EEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeeh-HH---h-ccccHHHHHHHHHHHHHcCCC
Confidence 9998876421 110 001135667777776665544333455542111 00 0 112357788888899999999
Q ss_pred EEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccH
Q 015894 264 EISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVAT 343 (398)
Q Consensus 264 ~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~l 343 (398)
.|.+-= |.-+++.+.++.+.+...+| +-+- -..+|.-. .-.--+.|+++|-....++ |+-+.++
T Consensus 186 ~i~~e~--~~~~~~~~~~i~~~~~~~~P---~i~~-~~~~~~~~--~~eL~~lGv~~v~~~~~~~--------raa~~a~ 249 (295)
T 1s2w_A 186 AILMHS--KKADPSDIEAFMKAWNNQGP---VVIV-PTKYYKTP--TDHFRDMGVSMVIWANHNL--------RASVSAI 249 (295)
T ss_dssp EEEECC--CSSSSHHHHHHHHHHTTCSC---EEEC-CSTTTTSC--HHHHHHHTCCEEEECSHHH--------HHHHHHH
T ss_pred EEEEcC--CCCCHHHHHHHHHHcCCCCC---EEEe-CCCCCCCC--HHHHHHcCCcEEEEChHHH--------HHHHHHH
Confidence 999851 34457888888888764445 3221 11123221 3344468999998877776 5667888
Q ss_pred HHHHHHHHhCC
Q 015894 344 EDVVYMLNGLG 354 (398)
Q Consensus 344 E~vv~~L~~~G 354 (398)
+++...+.+.|
T Consensus 250 ~~~~~~i~~~g 260 (295)
T 1s2w_A 250 QQTTKQIYDDQ 260 (295)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHcC
Confidence 88888887644
No 292
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=87.19 E-value=1.7 Score=40.35 Aligned_cols=90 Identities=19% Similarity=0.209 Sum_probs=67.6
Q ss_pred HHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHH
Q 015894 179 EAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLY 258 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~ 258 (398)
....+.|...|.+|----. +.++.++.+++.|.+.|+.++ -.+-.|.+.+.++.+.+.
T Consensus 152 aml~dmG~~SvKffPm~Gl------------~~l~E~~avAka~a~~g~~lE----------PTGGIdl~N~~~I~~i~l 209 (249)
T 3m0z_A 152 ALLKDMGGSSIKYFPMGGL------------KHRAEFEAVAKACAAHDFWLE----------PTGGIDLENYSEILKIAL 209 (249)
T ss_dssp HHHHHTTCCEEEECCCTTT------------TTHHHHHHHHHHHHHTTCEEE----------EBSSCCTTTHHHHHHHHH
T ss_pred HHHHHcCCCeeeEeecCCc------------ccHHHHHHHHHHHHHcCceEC----------CCCCccHhhHHHHHHHHH
Confidence 4456789999998732111 346777888999999999443 234578888999999999
Q ss_pred hCCCCEE-------EEccCcCcCCHHHHHHHHHHHHhhC
Q 015894 259 DMGCSEI-------SLGDTIGVGTPGTVIPMLEAVLDAV 290 (398)
Q Consensus 259 ~~Gad~I-------~L~DT~G~~~P~~v~~lv~~l~~~~ 290 (398)
++|+..| .|--..|.-.|++|++++..+++.+
T Consensus 210 ~aGv~~viPHIYssIIDk~TG~TrpedV~~ll~~~K~l~ 248 (249)
T 3m0z_A 210 DAGVSKIIPHIYSSIIDKASGNTRPADVRQLLEMTKQLV 248 (249)
T ss_dssp HHTCSCBCCBCCGGGBCTTTCCBCHHHHHHHHHHHHHHC
T ss_pred HcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHhh
Confidence 9998764 2335679999999999999998753
No 293
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=87.18 E-value=3.3 Score=39.59 Aligned_cols=82 Identities=17% Similarity=0.192 Sum_probs=68.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCC-CCeEEEE-eCCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVP-VDKLAVH-FHDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~l~~H-~Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .++|-++ ++|+..-++..+..|-++|
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 107 (301)
T 1xky_A 28 GNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVG 107 (301)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999988 5678888888888887653 4556554 5678888999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 108 adavlv~ 114 (301)
T 1xky_A 108 VDAVMLV 114 (301)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9977554
No 294
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=87.15 E-value=9.1 Score=38.89 Aligned_cols=109 Identities=16% Similarity=0.138 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHhC-CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEE-EEc-cC----cCc--CCHHHHHHH
Q 015894 212 LIRYRDVALAAREL-SIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEI-SLG-DT----IGV--GTPGTVIPM 282 (398)
Q Consensus 212 l~~~~~~v~~ak~~-G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I-~L~-DT----~G~--~~P~~v~~l 282 (398)
+..++++++.+|+. +.-+- .++ -.+++.+..+++.+.+.+...| ... .. .|+ ++|..+..+
T Consensus 5 l~~mkelL~~ak~g~~~gi~-av~---------~~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~ 74 (450)
T 3txv_A 5 ENHLIDIARWSERPGPRGIP-SIC---------SAHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRF 74 (450)
T ss_dssp ----------------CCEE-EEC---------CCCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHH
T ss_pred ccCHHHHHHHHHhCCCcEEE-EeC---------cCCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHH
Confidence 34467778888872 23331 222 1478888899999999987754 333 22 233 568999999
Q ss_pred HHHHHhhC--CCCeEEEEe---CCc----------cchHHHHHHHHHHhCCC--EEeeccccCCC
Q 015894 283 LEAVLDAV--PVDKLAVHF---HDT----------YGQALSNILASLQMGIS--TVDSSVSGLGG 330 (398)
Q Consensus 283 v~~l~~~~--p~~~l~~H~---Hnd----------~GlA~ANalaAl~aGa~--~VD~Sv~GlGe 330 (398)
+..+.++. |..+|.+|+ -.+ +..+...+..|+++|.+ +||+|...+++
T Consensus 75 V~~~A~~~~vPv~pV~LhlDHg~~~~w~~~~~~~am~~a~e~i~~aI~AGFtSVMiD~S~~p~ee 139 (450)
T 3txv_A 75 VGAIADRIEFPREKILLGGDHLGPNPWKHLPADEAMAKAEAMITAYAKAGFTKLHLDTSMGCAGE 139 (450)
T ss_dssp HHHHHHHTTCCGGGEEEEEEEESSGGGTTSCHHHHHHHHHHHHHHHHTTTCCEEEECCCBCCSSS
T ss_pred HHHHHHHcCcCcccEEEECCCCCCcccccccHHHHHHHHHHHHHHHHHcCCCEEEECCCCCchhh
Confidence 99887764 532455554 221 12367888899999998 77999999999
No 295
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=87.14 E-value=14 Score=35.38 Aligned_cols=146 Identities=14% Similarity=0.036 Sum_probs=86.2
Q ss_pred CcEEEEe-CCHhhHHHHHHcCCCEEEEe-ccCchHHHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC
Q 015894 166 ARFPVLT-PNLKGFEAAVAAGAKEVAIF-ASASESFSKSN-INCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE 242 (398)
Q Consensus 166 ~~l~~l~-~n~~~ie~a~~~Gv~~v~i~-~~~Sd~~~~~~-~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~ 242 (398)
-.+.++. .+.-....+.++|++.+.+. .+++-.+-..- ...|.++.+..++.+.+. ..+.|.+.+ |..
T Consensus 19 ~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~---~~~PviaD~------d~G 89 (295)
T 1s2w_A 19 DLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDA---SDVPILLDA------DTG 89 (295)
T ss_dssp SCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHT---CSSCEEEEC------CSS
T ss_pred CcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhc---CCCCEEecC------CCC
Confidence 3455554 35445556667899988876 33332111111 123566666666554443 345554322 222
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCc--------C----cCCH-HHHHHHHHHHHhhC--CCCeEEEEeCCc-----
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTI--------G----VGTP-GTVIPMLEAVLDAV--PVDKLAVHFHDT----- 302 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~--------G----~~~P-~~v~~lv~~l~~~~--p~~~l~~H~Hnd----- 302 (398)
--+++.+.+.++++.+.|+..|.|-|.. | .+.| .+..+.|+++++.. ++..|-.-+-..
T Consensus 90 -yg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g 168 (295)
T 1s2w_A 90 -YGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWG 168 (295)
T ss_dssp -CSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCC
T ss_pred -CCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhcccc
Confidence 1256788888999999999999999997 3 2444 45667777777664 443344443222
Q ss_pred cchHHHHHHHHHHhCCCEE
Q 015894 303 YGQALSNILASLQMGISTV 321 (398)
Q Consensus 303 ~GlA~ANalaAl~aGa~~V 321 (398)
.--++.-+.+-.+|||+.|
T Consensus 169 ~~~ai~Ra~ay~eAGAd~i 187 (295)
T 1s2w_A 169 LDEALKRAEAYRNAGADAI 187 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHcCCCEE
Confidence 2457888889999999965
No 296
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=87.07 E-value=4.9 Score=39.70 Aligned_cols=140 Identities=12% Similarity=-0.004 Sum_probs=80.6
Q ss_pred HHHHHcCCCEEEEeccC--------chH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEeeeecCC-CCCCC
Q 015894 179 EAAVAAGAKEVAIFASA--------SES--FSKSNINCTIEDSLIRYRDVALAAREL-SI-PVRGYLSCVVGCP-VEGMV 245 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~--------Sd~--~~~~~~~~s~~~~l~~~~~~v~~ak~~-G~-~v~~~l~~~fg~~-~~~r~ 245 (398)
++|.++|.|.|.|-..- |+. +....+|-+.++-.+.+.++++.+|+. |. .|.+-++...... .....
T Consensus 174 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~ 253 (376)
T 1icp_A 174 RNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTN 253 (376)
T ss_dssp HHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSC
T ss_pred HHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCC
Confidence 46678999998886541 121 122345566777777778888887764 43 5555454210000 01234
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEccCc-CcCCHH-HHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhC-CCEEe
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGDTI-GVGTPG-TVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMG-ISTVD 322 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~DT~-G~~~P~-~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aG-a~~VD 322 (398)
+.+...++++.+.++|++.|.+..-. ....|. ...++++.+++.++. ||..=.--+ ...+..+++.| ||.|-
T Consensus 254 ~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~i-Pvi~~G~i~----~~~a~~~l~~g~aD~V~ 328 (376)
T 1icp_A 254 PTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKG-TFIVAGGYD----REDGNRALIEDRADLVA 328 (376)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCS-CEEEESSCC----HHHHHHHHHTTSCSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCC-CEEEeCCCC----HHHHHHHHHCCCCcEEe
Confidence 56778899999999999998885311 001121 112456777777753 444322222 35667788887 77664
Q ss_pred e
Q 015894 323 S 323 (398)
Q Consensus 323 ~ 323 (398)
.
T Consensus 329 ~ 329 (376)
T 1icp_A 329 Y 329 (376)
T ss_dssp E
T ss_pred e
Confidence 3
No 297
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=87.04 E-value=2.8 Score=40.35 Aligned_cols=82 Identities=13% Similarity=0.088 Sum_probs=69.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCC-CCeEEEEe-CCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVP-VDKLAVHF-HDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~l~~H~-Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.| .++.++-.++++.+.+... .+++-+|. +|+..-++..+..|-++|
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 102 (311)
T 3h5d_A 23 GSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFG 102 (311)
T ss_dssp SSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcC
Confidence 568889999999999999999999999999 5778888899999988763 46777765 678889999999999999
Q ss_pred C-CEEeec
Q 015894 318 I-STVDSS 324 (398)
Q Consensus 318 a-~~VD~S 324 (398)
+ +.+=..
T Consensus 103 a~davlv~ 110 (311)
T 3h5d_A 103 GFAAGLAI 110 (311)
T ss_dssp CCSEEEEE
T ss_pred CCcEEEEc
Confidence 7 876543
No 298
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=86.99 E-value=3.2 Score=43.82 Aligned_cols=116 Identities=13% Similarity=0.154 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEeeeecC---------CCC-----CCCCH------------HHHHHHHHHHHhCCC
Q 015894 209 EDSLIRYRDVALAARELSIPVRGYLSCVVGC---------PVE-----GMVPP------------SKVAYVSKQLYDMGC 262 (398)
Q Consensus 209 ~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~---------~~~-----~r~~~------------~~l~~~a~~l~~~Ga 262 (398)
++.++..+.+++.+++.|-.+.+.|... |- |-. ...+| +.+.+.++.+.++|.
T Consensus 77 ~~~~~~~~~~~~~vh~~g~~i~~Ql~h~-Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGf 155 (671)
T 1ps9_A 77 ASQIPHHRTITEAVHQEGGKIALQILHT-GRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGY 155 (671)
T ss_dssp GGGHHHHHHHHHHHHHTTCCEEEEECCC-GGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeccC-CcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3456777788888899998887777652 10 000 01122 466677888889999
Q ss_pred CEEEEc-------------------cCcCcC---CHHHHHHHHHHHHhhCC-CCeEEEEe------C--CccchHHHHHH
Q 015894 263 SEISLG-------------------DTIGVG---TPGTVIPMLEAVLDAVP-VDKLAVHF------H--DTYGQALSNIL 311 (398)
Q Consensus 263 d~I~L~-------------------DT~G~~---~P~~v~~lv~~l~~~~p-~~~l~~H~------H--nd~GlA~ANal 311 (398)
|.|.|- |-.|.. .+..+.++++++|+.++ +.+|.+.. | .+...++.-+.
T Consensus 156 d~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~ 235 (671)
T 1ps9_A 156 DGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQ 235 (671)
T ss_dssp SEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHH
T ss_pred CEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHH
Confidence 998873 333432 24558889999999884 55665522 2 22333444444
Q ss_pred HHHHhCCCEEeecc
Q 015894 312 ASLQMGISTVDSSV 325 (398)
Q Consensus 312 aAl~aGa~~VD~Sv 325 (398)
+.-++|+++|+++.
T Consensus 236 ~l~~~g~d~i~v~~ 249 (671)
T 1ps9_A 236 AIEAAGATIINTGI 249 (671)
T ss_dssp HHHHHTCSEEEEEE
T ss_pred HHHhcCCCEEEcCC
Confidence 55579999999864
No 299
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=86.96 E-value=5.4 Score=37.89 Aligned_cols=126 Identities=13% Similarity=0.030 Sum_probs=70.3
Q ss_pred CHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC------CCCCH
Q 015894 174 NLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE------GMVPP 247 (398)
Q Consensus 174 n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~------~r~~~ 247 (398)
+.++++...+.|+..||+.+.-.........+.-.+..++.+.++|+.|+++|+.|...+-..-|.... .-.++
T Consensus 30 ~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~~~g~~~~~~~~~~~~~~~ 109 (343)
T 1ceo_A 30 TEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAPGYRFQDFKTSTLFEDP 109 (343)
T ss_dssp CHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECCC--------CCTTTCH
T ss_pred CHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEecCCCccccCCCCcccCcCCH
Confidence 467888899999999999876332211111112235678999999999999999987666543221110 11222
Q ss_pred ---HHHHHHHHHHHh-CCC--C--EEEEccCcCcCCHHH----HHHHHHHHHhhCCCCeEEEEe
Q 015894 248 ---SKVAYVSKQLYD-MGC--S--EISLGDTIGVGTPGT----VIPMLEAVLDAVPVDKLAVHF 299 (398)
Q Consensus 248 ---~~l~~~a~~l~~-~Ga--d--~I~L~DT~G~~~P~~----v~~lv~~l~~~~p~~~l~~H~ 299 (398)
+.+.++.+.+.+ ++- . .+.|..=-....+.. +.++++++|+.-|..+|-++.
T Consensus 110 ~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~IR~~~p~~~i~v~~ 173 (343)
T 1ceo_A 110 NQQKRFVDIWRFLAKRYINEREHIAFELLNQVVEPDSTRWNKLMLECIKAIREIDSTMWLYIGG 173 (343)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCSSEEEECCSCCCCSSSHHHHHHHHHHHHHHHHHCSSCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCcchHHHHHHHHHHHHHHHhhCCCCEEEEeC
Confidence 334444444432 221 1 223322111112333 346778888877876677774
No 300
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=86.95 E-value=6.2 Score=38.80 Aligned_cols=127 Identities=15% Similarity=0.205 Sum_probs=71.8
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE-EeCCHhhHHHHHHcCCCEEEEeccCchH--
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV-LTPNLKGFEAAVAAGAKEVAIFASASES-- 198 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~-l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~-- 198 (398)
.+.++.+.++|++.|++...... | ....+.++.+++.-+..+.+ -+.+.+.++.+.++|+|.|.+....-.+
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~---~--~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~ 181 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGH---S--LNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICT 181 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS---B--HHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCC---c--HHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCC
Confidence 67788899999999998643210 0 01112333334322555443 4567888999999999999983211111
Q ss_pred -HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcc
Q 015894 199 -FSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGD 269 (398)
Q Consensus 199 -~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~D 269 (398)
......+.. .+..+.++.+.+++.+++|.+ +.+-.+++.+.+ +.++||+.+.+.-
T Consensus 182 tr~~~g~g~p---~~~~i~~v~~~~~~~~iPVIA---------~GGI~~~~di~k----ala~GAd~V~vGs 237 (361)
T 3khj_A 182 TRIVAGVGVP---QITAIEKCSSVASKFGIPIIA---------DGGIRYSGDIGK----ALAVGASSVMIGS 237 (361)
T ss_dssp HHHHTCBCCC---HHHHHHHHHHHHHHHTCCEEE---------ESCCCSHHHHHH----HHHHTCSEEEEST
T ss_pred cccccCCCCC---cHHHHHHHHHHHhhcCCeEEE---------ECCCCCHHHHHH----HHHcCCCEEEECh
Confidence 111112222 234455555666667877642 223345655444 3357999887763
No 301
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=86.95 E-value=10 Score=36.36 Aligned_cols=15 Identities=7% Similarity=-0.062 Sum_probs=9.2
Q ss_pred CCCccHHHHHHHHHh
Q 015894 338 SGNVATEDVVYMLNG 352 (398)
Q Consensus 338 aGNa~lE~vv~~L~~ 352 (398)
.+|..-+.++...+.
T Consensus 230 ~an~~P~~~~~l~~a 244 (315)
T 3na8_A 230 APNLIPTLNGQLYQA 244 (315)
T ss_dssp GGGTCHHHHHHHHHH
T ss_pred hhhhCHHHHHHHHHH
Confidence 556666666665553
No 302
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=86.91 E-value=6.1 Score=40.64 Aligned_cols=129 Identities=16% Similarity=0.170 Sum_probs=76.2
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHH-hccCCcEEE-EeCCHhhHHHHHHcCCCEEEEeccCch
Q 015894 120 VKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ-NVEGARFPV-LTPNLKGFEAAVAAGAKEVAIFASASE 197 (398)
Q Consensus 120 ~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~-~~~~~~l~~-l~~n~~~ie~a~~~Gv~~v~i~~~~Sd 197 (398)
+..+.++.|.++|++.|++.... +. .....+.++.++ ..++..+.+ -+.+.++.+.+.++|+|.|.+-...-.
T Consensus 256 d~~era~aLveaGvd~I~Id~a~-g~----~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gs 330 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAH-GH----SQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGS 330 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSC-TT----SHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCST
T ss_pred chHHHHHHHHhhccceEEecccc-cc----hhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCcc
Confidence 44677889999999999998532 11 112234444454 345554443 245778889999999999987322111
Q ss_pred HH---HhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcc
Q 015894 198 SF---SKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGD 269 (398)
Q Consensus 198 ~~---~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~D 269 (398)
++ ....++.. .+..+.++.+.+++.+++|.+ +.+-.++..+.+. .++||+.+.+.-
T Consensus 331 i~~~~~~~g~g~p---~~~~l~~v~~~~~~~~iPVIa---------~GGI~~~~di~ka----la~GA~~V~vGs 389 (511)
T 3usb_A 331 ICTTRVVAGVGVP---QLTAVYDCATEARKHGIPVIA---------DGGIKYSGDMVKA----LAAGAHVVMLGS 389 (511)
T ss_dssp TCCHHHHHCCCCC---HHHHHHHHHHHHHTTTCCEEE---------ESCCCSHHHHHHH----HHTTCSEEEEST
T ss_pred ccccccccCCCCC---cHHHHHHHHHHHHhCCCcEEE---------eCCCCCHHHHHHH----HHhCchhheecH
Confidence 11 01112222 244556667777888887742 2344456654443 358999887764
No 303
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=86.89 E-value=22 Score=34.01 Aligned_cols=155 Identities=14% Similarity=0.131 Sum_probs=86.5
Q ss_pred HHHHHHHHhcCC-CEEEEecCCCCCcccCCCCHHHHHHHHH---hccCCcEE--EEe--CC-HhhHHHHHHcCCCEEEEe
Q 015894 122 VELIKLLVSSGL-AVVEATSFVSPKWVPQLADAKDVMAAIQ---NVEGARFP--VLT--PN-LKGFEAAVAAGAKEVAIF 192 (398)
Q Consensus 122 ~~ia~~L~~aGv-~~IEvG~~~~~~~~p~~~D~~~v~~~i~---~~~~~~l~--~l~--~n-~~~ie~a~~~Gv~~v~i~ 192 (398)
.+++....++|. -.|..++ .+++++.+.++ +..+..+. .++ +. .+.++.+.+.|++.|.+.
T Consensus 40 ~~la~av~~aGglG~i~~~~----------~~~~~l~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~ 109 (326)
T 3bo9_A 40 PTLAAAVSEAGGLGIIGSGA----------MKPDDLRKAISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFG 109 (326)
T ss_dssp HHHHHHHHHTTSBEEEECTT----------CCHHHHHHHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHhCCCcEEeCCCC----------CCHHHHHHHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEEC
Confidence 457777788874 3332211 23444444444 33233333 233 22 346788889999999875
Q ss_pred ccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccC-c
Q 015894 193 ASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDT-I 271 (398)
Q Consensus 193 ~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT-~ 271 (398)
... . . +.++.+++.|+.+...+ .+++ .++.+.+.|+|.|.+-.. .
T Consensus 110 ~g~-----------p-~-------~~~~~l~~~g~~v~~~v-----------~s~~----~a~~a~~~GaD~i~v~g~~~ 155 (326)
T 3bo9_A 110 AGN-----------P-T-------KYIRELKENGTKVIPVV-----------ASDS----LARMVERAGADAVIAEGMES 155 (326)
T ss_dssp SSC-----------C-H-------HHHHHHHHTTCEEEEEE-----------SSHH----HHHHHHHTTCSCEEEECTTS
T ss_pred CCC-----------c-H-------HHHHHHHHcCCcEEEEc-----------CCHH----HHHHHHHcCCCEEEEECCCC
Confidence 432 1 1 23456677888775322 2333 355677899999888431 1
Q ss_pred CcC-CHHHHHHHHHHHHhhCCCCeEEEEeCCccchH-HHHHHHHHHhCCCEEeecc
Q 015894 272 GVG-TPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA-LSNILASLQMGISTVDSSV 325 (398)
Q Consensus 272 G~~-~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA-~ANalaAl~aGa~~VD~Sv 325 (398)
|.. -+....+++..+++.+. +||-.= -|.. ..|+.+++.+||+.|+..-
T Consensus 156 GG~~G~~~~~~ll~~i~~~~~-iPviaa----GGI~~~~dv~~al~~GA~gV~vGs 206 (326)
T 3bo9_A 156 GGHIGEVTTFVLVNKVSRSVN-IPVIAA----GGIADGRGMAAAFALGAEAVQMGT 206 (326)
T ss_dssp SEECCSSCHHHHHHHHHHHCS-SCEEEE----SSCCSHHHHHHHHHHTCSEEEESH
T ss_pred CccCCCccHHHHHHHHHHHcC-CCEEEE----CCCCCHHHHHHHHHhCCCEEEech
Confidence 211 11123356667766552 345443 3555 5677788889999887653
No 304
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=86.84 E-value=2.9 Score=40.38 Aligned_cols=82 Identities=15% Similarity=0.059 Sum_probs=69.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhC-CCCeEEEEe-CCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAV-PVDKLAVHF-HDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~l~~H~-Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|- ++.++-.++++.+.+.. ..++|-++. +|+..-++..+..|-++|
T Consensus 40 g~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 119 (315)
T 3na8_A 40 GGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLG 119 (315)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999996 56788888888888765 345677765 688999999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 120 adavlv~ 126 (315)
T 3na8_A 120 AEAVMVL 126 (315)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 9977553
No 305
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=86.68 E-value=14 Score=34.30 Aligned_cols=166 Identities=10% Similarity=0.092 Sum_probs=87.8
Q ss_pred HHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeCCHhhHHHHHHcCCCEEEEeccCchHHHhh
Q 015894 123 ELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKS 202 (398)
Q Consensus 123 ~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~ 202 (398)
+.++.+.++|.|.||+|.-.. + ...+..++++.+|+ .++.+..+..|...+ ..|+|.+-+..=.|.-
T Consensus 27 ~~l~~~~~~GtDaI~vGgs~g---v-t~~~~~~~v~~ik~-~~~Piil~p~~~~~~----~~gaD~il~pslln~~---- 93 (235)
T 3w01_A 27 DDLDAICMSQTDAIMIGGTDD---V-TEDNVIHLMSKIRR-YPLPLVLEISNIESV----MPGFDFYFVPTVLNST---- 93 (235)
T ss_dssp HHHHHHHTSSCSEEEECCSSC---C-CHHHHHHHHHHHTT-SCSCEEEECCCSTTC----CTTCSEEEEEEETTBS----
T ss_pred HHHHHHHHcCCCEEEECCcCC---c-CHHHHHHHHHHhcC-cCCCEEEecCCHHHh----hcCCCEEEEccccCCC----
Confidence 345567899999999997321 1 01123344444444 444444444465443 4589977664322221
Q ss_pred hcCCCHHHHHHHHHHHHHHHHhCCC-----cE--EEEEeeeecCCCCCC---------CCHHHHHHHHHHHHh-CCCCEE
Q 015894 203 NINCTIEDSLIRYRDVALAARELSI-----PV--RGYLSCVVGCPVEGM---------VPPSKVAYVSKQLYD-MGCSEI 265 (398)
Q Consensus 203 ~~~~s~~~~l~~~~~~v~~ak~~G~-----~v--~~~l~~~fg~~~~~r---------~~~~~l~~~a~~l~~-~Gad~I 265 (398)
+-.+ ... .-++.+|+.|+ ++ ++|+.. .|.... .+++.+...+..+.+ +|-..|
T Consensus 94 ~~~~----i~g---~~~~a~~~~gl~~~~~e~i~~gYivv---~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~~~v 163 (235)
T 3w01_A 94 DVAF----HNG---TLLEALKTYGHSIDFEEVIFEGYVVC---NADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVM 163 (235)
T ss_dssp SGGG----TTH---HHHHHHHHHGGGCCGGGEEEEEEEEC---CSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEE
T ss_pred Ccch----hhh---HHHHHHHHcCCCCcccceeeeeEEEE---CCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCCCEE
Confidence 1111 111 11233677887 54 456653 233221 135666666653333 488889
Q ss_pred EEccCcCcCCHHHHHHHHHHHHhhCCCCeEEE--EeCCccchHHHHHHHHHHhCCCEE
Q 015894 266 SLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAV--HFHDTYGQALSNILASLQMGISTV 321 (398)
Q Consensus 266 ~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~--H~Hnd~GlA~ANalaAl~aGa~~V 321 (398)
|+.- .|.-- -.++++.+++..++.|+.+ -.++ .-....+..||+.|
T Consensus 164 Y~e~-sG~~g---~~~~v~~ir~~~~~~pv~vGfGI~~------~e~a~~~~~gAD~V 211 (235)
T 3w01_A 164 YIEY-SGIYG---DVSKVQAVSEHLTETQLFYGGGISS------EQQATEMAAIADTI 211 (235)
T ss_dssp EEEC-TTSCC---CHHHHHHHHTTCSSSEEEEESCCCS------HHHHHHHHTTSSEE
T ss_pred EEec-CCCcC---CHHHHHHHHHhcCCCCEEEECCcCC------HHHHHHHHcCCCEE
Confidence 8866 67633 4778888888774445444 3333 22223344488855
No 306
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=86.68 E-value=8.3 Score=38.01 Aligned_cols=105 Identities=12% Similarity=0.074 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHh-----CCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCc-------------
Q 015894 210 DSLIRYRDVALAARE-----LSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTI------------- 271 (398)
Q Consensus 210 ~~l~~~~~~v~~ak~-----~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~------------- 271 (398)
+.+..+...++.+++ ..++|.+-+. |+ .+.+.+.++++.+.++|+|.|.+-.|.
T Consensus 199 ~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~-----p~---~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~ 270 (367)
T 3zwt_A 199 AELRRLLTKVLQERDGLRRVHRPAVLVKIA-----PD---LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRS 270 (367)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGCCEEEEEEC-----SC---CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTT
T ss_pred HHHHHHHHHHHHHHhhccccCCceEEEEeC-----CC---CCHHHHHHHHHHHHHcCCCEEEEeCCCccccccccccccc
Confidence 445555455544432 3566654443 32 356789999999999999999988775
Q ss_pred --CcCCH----HHHHHHHHHHHhhCC-CCeEEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 272 --GVGTP----GTVIPMLEAVLDAVP-VDKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 272 --G~~~P----~~v~~lv~~l~~~~p-~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
|.+++ ....++|..+++.++ .++|-.=+-=.. ..-+..++++||+.|...-
T Consensus 271 ~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s---~~da~~~l~~GAd~V~vgr 328 (367)
T 3zwt_A 271 ETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSS---GQDALEKIRAGASLVQLYT 328 (367)
T ss_dssp SSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCS---HHHHHHHHHHTCSEEEESH
T ss_pred ccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCC---HHHHHHHHHcCCCEEEECH
Confidence 22221 223478888888885 455554333222 2556777788999876543
No 307
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=86.62 E-value=3.2 Score=46.30 Aligned_cols=135 Identities=16% Similarity=0.199 Sum_probs=76.9
Q ss_pred HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEeeeecCCCCCCCCHHHHHHHHHH
Q 015894 178 FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAAREL-SIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQ 256 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~-G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~ 256 (398)
++++.+.|+|.|.+-++.-....+..+|.+.....+.+.++++.+|+. ++.|.+-+. ++ .+.+.++++.
T Consensus 654 a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~-----~~-----~~~~~~~a~~ 723 (1025)
T 1gte_A 654 SRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLT-----PN-----VTDIVSIARA 723 (1025)
T ss_dssp HHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEEC-----SC-----SSCHHHHHHH
T ss_pred HHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeC-----CC-----hHHHHHHHHH
Confidence 345557899988885542111111222322222234455666666654 777764443 22 2246778889
Q ss_pred HHhCCCCEEEEccCc-------------------------CcCCHHH---HHHHHHHHHhhCCCCeEEEEeCCccchHHH
Q 015894 257 LYDMGCSEISLGDTI-------------------------GVGTPGT---VIPMLEAVLDAVPVDKLAVHFHDTYGQALS 308 (398)
Q Consensus 257 l~~~Gad~I~L~DT~-------------------------G~~~P~~---v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~A 308 (398)
+.++|+|.|.+..|. |...|.. ..+++..+++.+|.++|-.=+--..+..
T Consensus 724 ~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~d-- 801 (1025)
T 1gte_A 724 AKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAES-- 801 (1025)
T ss_dssp HHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHH--
T ss_pred HHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcCCHHH--
Confidence 999999999984331 1112211 1367888888886667766555554444
Q ss_pred HHHHHHHhCCCEEeecc
Q 015894 309 NILASLQMGISTVDSSV 325 (398)
Q Consensus 309 NalaAl~aGa~~VD~Sv 325 (398)
+..++.+||+.|-..-
T Consensus 802 -a~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 802 -GLQFLHSGASVLQVCS 817 (1025)
T ss_dssp -HHHHHHTTCSEEEESH
T ss_pred -HHHHHHcCCCEEEEee
Confidence 4455568999876654
No 308
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=86.59 E-value=4.7 Score=41.51 Aligned_cols=67 Identities=16% Similarity=0.123 Sum_probs=51.8
Q ss_pred HHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 251 AYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 251 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
.+.++.+.++|++.|.+-.+-| .+..+.++++.+++.+|+.++..-.=. ....+..++++||+.|.+
T Consensus 258 ~era~aLveaGvd~I~Id~a~g--~~~~v~~~i~~i~~~~~~~~vi~g~v~----t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHG--HSQGVIDKVKEVRAKYPSLNIIAGNVA----TAEATKALIEAGANVVKV 324 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTTSEEEEEEEC----SHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhhccceEEeccccc--chhhhhhHHHHHHHhCCCceEEeeeec----cHHHHHHHHHhCCCEEEE
Confidence 4557788899999998876644 567888999999999997777653322 235578889999999997
No 309
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=86.56 E-value=3.6 Score=40.02 Aligned_cols=82 Identities=12% Similarity=0.007 Sum_probs=68.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCC-CCeEEEE-eCCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVP-VDKLAVH-FHDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~l~~H-~Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.| .+++++-.++++.+++... .++|-++ ++|+..-++..+..|-++|
T Consensus 50 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~G 129 (332)
T 2r8w_A 50 GRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAG 129 (332)
T ss_dssp CCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999998 5678888888888887654 4566554 5678888999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.|=+.
T Consensus 130 adavlv~ 136 (332)
T 2r8w_A 130 ADALLLA 136 (332)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 9977544
No 310
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=86.48 E-value=8.8 Score=36.41 Aligned_cols=123 Identities=16% Similarity=0.185 Sum_probs=75.7
Q ss_pred HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 015894 178 FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQL 257 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l 257 (398)
.+..++.|++.|.|-.-.+-.. .-..+.+|-++++..+++..++.++.+. . |..+ + ++++++
T Consensus 36 a~~m~~~GAdiIDIGgeSTRPg---a~~vs~eeE~~Rv~pvi~~l~~~~v~iS------I---DT~~--~----~Va~~a 97 (270)
T 4hb7_A 36 VKAMIDEGADIIDVGGVSTRPG---HEMVTLEEELNRVLPVVEAIVGFDVKIS------V---DTFR--S----EVAEAC 97 (270)
T ss_dssp HHHHHHTTCSEEEEESCCCSTT---CCCCCHHHHHHHHHHHHHHHTTSSSEEE------E---ECSC--H----HHHHHH
T ss_pred HHHHHHCCCCEEEECCccCCCC---CCCCchHHHHHHHHHHHHHhhcCCCeEE------E---ECCC--H----HHHHHH
Confidence 3455779999999953222111 1235788999999999999988776554 1 3322 2 577788
Q ss_pred HhCCCCEEEEccCc-CcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccch----------HHHHHHHHHHhCCC----EEe
Q 015894 258 YDMGCSEISLGDTI-GVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQ----------ALSNILASLQMGIS----TVD 322 (398)
Q Consensus 258 ~~~Gad~I~L~DT~-G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~Gl----------A~ANalaAl~aGa~----~VD 322 (398)
.++|++.|+ |-. |...|. +.++++. +...-+-.|...+... -....-.|..+|++ ++|
T Consensus 98 l~aGa~iIN--DVs~g~~d~~-m~~~va~----~~~~~vlMH~~~~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilD 170 (270)
T 4hb7_A 98 LKLGVDMIN--DQWAGLYDHR-MFQIVAK----YDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLD 170 (270)
T ss_dssp HHHTCCEEE--ETTTTSSCTH-HHHHHHH----TTCEEEEECCCSSCCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHhccceec--cccccccchh-HHHHHHH----cCCCeEEeccccCCccccchhHHHHHHHHHHHHHHHcCCCCceEEEe
Confidence 899999765 765 455564 3343332 3222355676554322 12334567889995 778
Q ss_pred ecc
Q 015894 323 SSV 325 (398)
Q Consensus 323 ~Sv 325 (398)
-.+
T Consensus 171 PGi 173 (270)
T 4hb7_A 171 PGI 173 (270)
T ss_dssp CCT
T ss_pred CCC
Confidence 843
No 311
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=86.35 E-value=4 Score=38.85 Aligned_cols=74 Identities=16% Similarity=0.209 Sum_probs=49.6
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcc-Cc--C---cCCHHH---HHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHH
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGD-TI--G---VGTPGT---VIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~D-T~--G---~~~P~~---v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~ 315 (398)
.+++...+.++++.+.|||.|-+.= +. | +...++ +...++.+++. +++|.+++.+- .-+.+|++
T Consensus 26 ~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT~~~-----~va~aAl~ 98 (280)
T 1eye_A 26 LDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDTMRA-----DVARAALQ 98 (280)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCEEEECSCH-----HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeCCCH-----HHHHHHHH
Confidence 4789999999999999999988772 11 1 111234 44455555543 67899988763 55678899
Q ss_pred hCCCEEeecc
Q 015894 316 MGISTVDSSV 325 (398)
Q Consensus 316 aGa~~VD~Sv 325 (398)
+|+++|+-.-
T Consensus 99 aGa~iINdvs 108 (280)
T 1eye_A 99 NGAQMVNDVS 108 (280)
T ss_dssp TTCCEEEETT
T ss_pred cCCCEEEECC
Confidence 9999996443
No 312
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=86.30 E-value=1.6 Score=40.94 Aligned_cols=165 Identities=12% Similarity=0.056 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCCEEEEecCCCCCc-ccCCCCHHHHHHHHH--hccCCcEEEEeCCHhh----HHHHHHc-CCCEEEEecc
Q 015894 123 ELIKLLVSSGLAVVEATSFVSPKW-VPQLADAKDVMAAIQ--NVEGARFPVLTPNLKG----FEAAVAA-GAKEVAIFAS 194 (398)
Q Consensus 123 ~ia~~L~~aGv~~IEvG~~~~~~~-~p~~~D~~~v~~~i~--~~~~~~l~~l~~n~~~----ie~a~~~-Gv~~v~i~~~ 194 (398)
...+.|.+.|.+.||+|.+.+ +. .+.+.+.-+.++.++ .+|++. .+.+.++ ++.+.++ |.+.|.+.+.
T Consensus 27 ~~~~~l~~~Gad~ielg~pr~-~~~g~~~~~~~~~l~~~~~~~~pn~~---~~~~~~~~~~f~~~a~~agg~~~i~l~i~ 102 (264)
T 1xm3_A 27 IQKEAVAVSESDILTFAVRRM-NIFEASQPNFLEQLDLSKYTLLPNTA---GASTAEEAVRIARLAKASGLCDMIKVEVI 102 (264)
T ss_dssp HHHHHHHHHTCSEEEEETTSS-TTC-------CTTCCGGGSEEEEECT---TCSSHHHHHHHHHHHHHTTCCSSEEECCB
T ss_pred HHHHHHHHcCCeEEEEccccc-ccCCCCHHHHHHHHHhcCCeEcCCcc---ccCCHHHHHHHHHHHHHcCCCCeEEEeec
Q ss_pred CchHHHhhhcCCCHHHHHHHHHHHHHHHHhC---CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE-ccC
Q 015894 195 ASESFSKSNINCTIEDSLIRYRDVALAAREL---SIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL-GDT 270 (398)
Q Consensus 195 ~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~---G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L-~DT 270 (398)
.... ..++...+.++.++++ |+.+-+... .+++ .++++.+.|++.|.. .-.
T Consensus 103 ~d~~-----------~~~~e~~~~~~~a~~~~~~g~~vi~~~~----------~~~~----~a~~~~~~gad~v~~~~~~ 157 (264)
T 1xm3_A 103 GCSR-----------SLLPDPVETLKASEQLLEEGFIVLPYTS----------DDVV----LARKLEELGVHAIMPGASP 157 (264)
T ss_dssp CCTT-----------TCCBCHHHHHHHHHHHHHTTCCEEEEEC----------SCHH----HHHHHHHHTCSCBEECSSS
T ss_pred CCCc-----------ccccchHHHHHHHHHHHCCCeEEEEEcC----------CCHH----HHHHHHHhCCCEEEECCcc
Q ss_pred cCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH-HHHHHHHHHhCCCEE
Q 015894 271 IGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA-LSNILASLQMGISTV 321 (398)
Q Consensus 271 ~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA-~ANalaAl~aGa~~V 321 (398)
.|......-.+.++.+++ ..++|+.+-+ |.. ..++..++++||+.|
T Consensus 158 ~Gt~~~~~~~~~l~~i~~-~~~iPviv~g----GI~t~eda~~~~~~GAdgV 204 (264)
T 1xm3_A 158 IGSGQGILNPLNLSFIIE-QAKVPVIVDA----GIGSPKDAAYAMELGADGV 204 (264)
T ss_dssp TTCCCCCSCHHHHHHHHH-HCSSCBEEES----CCCSHHHHHHHHHTTCSEE
T ss_pred cCCCCCCCCHHHHHHHHh-cCCCCEEEEe----CCCCHHHHHHHHHcCCCEE
No 313
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=86.26 E-value=21 Score=33.13 Aligned_cols=102 Identities=15% Similarity=0.224 Sum_probs=57.9
Q ss_pred HHHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCc------Cc-------------CC
Q 015894 216 RDVALAARELSIP-VRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTI------GV-------------GT 275 (398)
Q Consensus 216 ~~~v~~ak~~G~~-v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~------G~-------------~~ 275 (398)
.+..+.+|+.|-. +.++++ .+..+.+...++++.+.+.|+|.|-+.=.. |- ++
T Consensus 5 ~~~f~~~~~~~~~~~i~~i~-------~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~ 77 (268)
T 1qop_A 5 ENLFAQLNDRREGAFVPFVT-------LGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVT 77 (268)
T ss_dssp HHHHHHHHHTTCCEEEEEEE-------TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCceEEEEee-------CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCC
Confidence 3444555555544 445554 223456889999999999999977662111 11 12
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEe-CCc-cchHHH-HHHHHHHhCCCEEeec
Q 015894 276 PGTVIPMLEAVLDAVPVDKLAVHF-HDT-YGQALS-NILASLQMGISTVDSS 324 (398)
Q Consensus 276 P~~v~~lv~~l~~~~p~~~l~~H~-Hnd-~GlA~A-NalaAl~aGa~~VD~S 324 (398)
...+.++++.+|+.++.+|+++=. -|. +-.++. -+-.+.++|++.|-.-
T Consensus 78 ~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~ 129 (268)
T 1qop_A 78 PAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVA 129 (268)
T ss_dssp HHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEc
Confidence 344558899999885555655421 111 111122 2334678999966543
No 314
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=86.18 E-value=9.4 Score=35.56 Aligned_cols=115 Identities=13% Similarity=0.084 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE--EeCCHhhHHHHHHcCCCEEEEeccCc
Q 015894 119 VVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV--LTPNLKGFEAAVAAGAKEVAIFASAS 196 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~--l~~n~~~ie~a~~~Gv~~v~i~~~~S 196 (398)
.+-.++++...+.|...|-+-. .+.+.. ... +.++.+++..+..+.. +..+..+++.+.++|+|.|.+....
T Consensus 65 ~~p~~~A~~~~~~GA~~isvlt--~~~~f~--G~~-~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~- 138 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVLT--EPHRFG--GSL-LDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVAL- 138 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEC--CCSSSC--CCH-HHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHH-
T ss_pred CCHHHHHHHHHHcCCCEEEEec--chhhhc--cCH-HHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEECccc-
Confidence 4568899999999999998821 122110 123 3344555433333221 2346667889999999999996541
Q ss_pred hHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 015894 197 ESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLG 268 (398)
Q Consensus 197 d~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~ 268 (398)
. + +.++++++.++++|+.+.+.+. +.+++ +.+.+.|++.|.+.
T Consensus 139 -l-----------~--~~l~~l~~~a~~lGl~~lvev~-----------~~~E~----~~a~~~gad~IGvn 181 (254)
T 1vc4_A 139 -L-----------G--ELTGAYLEEARRLGLEALVEVH-----------TEREL----EIALEAGAEVLGIN 181 (254)
T ss_dssp -H-----------G--GGHHHHHHHHHHHTCEEEEEEC-----------SHHHH----HHHHHHTCSEEEEE
T ss_pred -h-----------H--HHHHHHHHHHHHCCCeEEEEEC-----------CHHHH----HHHHHcCCCEEEEc
Confidence 0 1 4467778889999988753221 34443 25667888887663
No 315
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=86.16 E-value=8 Score=36.25 Aligned_cols=177 Identities=15% Similarity=-0.010 Sum_probs=84.8
Q ss_pred HHHHHHcCCCEEEEeccCchHHH--------hhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHH
Q 015894 178 FEAAVAAGAKEVAIFASASESFS--------KSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSK 249 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~Sd~~~--------~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~ 249 (398)
++.|.+.|++.|.+......... .....-..+...+.+.++.++|++.|+.+. +... +.....+++.
T Consensus 117 i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lEn~---~~~~~~~~~~ 191 (340)
T 2zds_A 117 ARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFA--HEVH---PSEIAYDYWT 191 (340)
T ss_dssp HHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEEE--EECC---TTSSCCSHHH
T ss_pred HHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEEE--EEcC---CCcccCCHHH
Confidence 45667789999988644211000 000000123455666777888999998754 3321 1122246666
Q ss_pred HHHHHHHHHhCC-CCEE-EEccCcCcCCH-HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccc
Q 015894 250 VAYVSKQLYDMG-CSEI-SLGDTIGVGTP-GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVS 326 (398)
Q Consensus 250 l~~~a~~l~~~G-ad~I-~L~DT~G~~~P-~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~ 326 (398)
+.++++ +.+ .+.+ ..-|+.=...- .+..+.++.+ .+-..++|++|..+--. ...|.. | .-.
T Consensus 192 ~~~ll~---~v~~~~~vg~~~D~~H~~~~g~d~~~~l~~~----~~~i~~vHl~D~~~~~~------~~~g~~--~-~~~ 255 (340)
T 2zds_A 192 THRALE---AVGHRPAFGLNFDPSHFVWQDLDPVGFLWDF----RDRIYHVDCKEARKRLD------GRNGRL--G-SHL 255 (340)
T ss_dssp HHHHHH---HTTTCTTEEEEECCHHHHHTTCCHHHHHHHT----GGGEEEEEECEEEECCC------SSSCTT--C-TTC
T ss_pred HHHHHH---hcCCCCCeeEEEchhhHHHhCCCHHHHHHHH----HhhEEEEEeccCccccc------cccccc--c-ccC
Confidence 655554 444 3322 23465322111 1222333333 22347889998752100 001111 0 000
Q ss_pred cCCCC-----CCCCCCCCCccHHHHHHHHHhCCCCCcc--C--------hHHHHHHHHHHHHHhC
Q 015894 327 GLGGC-----PYAKGASGNVATEDVVYMLNGLGVRTNV--D--------IRKLMIAGDFICKHLG 376 (398)
Q Consensus 327 GlGec-----p~a~graGNa~lE~vv~~L~~~Gi~t~i--D--------l~~L~~~~~~v~~~~g 376 (398)
+.|.+ ...+ +.|..+...++..|++.|++--+ . .+.+.+..+++.+.+.
T Consensus 256 ~~~~~~r~~~~~~~-G~G~id~~~i~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~s~~~l~~~~~ 319 (340)
T 2zds_A 256 PWGDPRRGWDFVSA-GHGDVPWEDVFRMLRSIDYQGPVSVEWEDAGMDRLQGAPEALTRLKAFDF 319 (340)
T ss_dssp CTTCTTSSEEEECT-TSSCCCHHHHHHHHHHTTCCSCEEECCCCTTSCHHHHHHHHHHHHHTTCC
T ss_pred CcccccccceecCC-CCCccCHHHHHHHHHhcCCCccEEEEeeCCCcCHHHHHHHHHHHHHHHHh
Confidence 01110 0012 25789999999999987764211 1 2355555666666554
No 316
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=86.03 E-value=2.9 Score=40.29 Aligned_cols=82 Identities=12% Similarity=0.003 Sum_probs=67.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCC-CCeEEEEeCCccchHHHHHHHHHHhCC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVP-VDKLAVHFHDTYGQALSNILASLQMGI 318 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~l~~H~Hnd~GlA~ANalaAl~aGa 318 (398)
+..|.+.+.++++.+.+.|++.|.++-|.| .+++++-.++++.+.+... .++|-++.=.+..-++..+..|-++||
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Ga 107 (314)
T 3d0c_A 28 REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGA 107 (314)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999988 5678888888888887653 466766654466678888999999999
Q ss_pred CEEeec
Q 015894 319 STVDSS 324 (398)
Q Consensus 319 ~~VD~S 324 (398)
+.|=+.
T Consensus 108 davlv~ 113 (314)
T 3d0c_A 108 DCVMIH 113 (314)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 977554
No 317
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=86.02 E-value=2.1 Score=40.89 Aligned_cols=72 Identities=18% Similarity=0.260 Sum_probs=52.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcc-CcCcC--------CHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHh
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGD-TIGVG--------TPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQM 316 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~D-T~G~~--------~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~a 316 (398)
+++...+.++++.+.|||.|-+.= +..-. ...++..+++.+++.+ +++|.+++.+- .-+.+|+++
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-~~piSIDT~~~-----~va~aAl~a 109 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWISVDTSKP-----EVIRESAKV 109 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-CCEEEEECCCH-----HHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-CCeEEEeCCCH-----HHHHHHHHc
Confidence 578888999999999999988775 32111 1234666777777765 57899988763 556788999
Q ss_pred CCCEEee
Q 015894 317 GISTVDS 323 (398)
Q Consensus 317 Ga~~VD~ 323 (398)
|+++|+-
T Consensus 110 Ga~iINd 116 (282)
T 1aj0_A 110 GAHIIND 116 (282)
T ss_dssp TCCEEEE
T ss_pred CCCEEEE
Confidence 9999954
No 318
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=86.00 E-value=17 Score=34.50 Aligned_cols=140 Identities=16% Similarity=0.083 Sum_probs=85.8
Q ss_pred CCcEEEEe-CCHhhHHHHHHcCCCEEEEeccCchHH--HhhhcCCCHHHHHHHHHHHHHHHHhCCCc-EEEEEeeeecCC
Q 015894 165 GARFPVLT-PNLKGFEAAVAAGAKEVAIFASASESF--SKSNINCTIEDSLIRYRDVALAARELSIP-VRGYLSCVVGCP 240 (398)
Q Consensus 165 ~~~l~~l~-~n~~~ie~a~~~Gv~~v~i~~~~Sd~~--~~~~~~~s~~~~l~~~~~~v~~ak~~G~~-v~~~l~~~fg~~ 240 (398)
+-++.+++ .+..-.+.+-++|++.+-+-.+++-.. .......|.++.+...+.+.+.+ ... |.+ ..|
T Consensus 16 g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~---~~~~vva------D~p 86 (275)
T 1o66_A 16 GEKIAMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGA---KNAMIVS------DLP 86 (275)
T ss_dssp TCCEEEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC---SSSEEEE------ECC
T ss_pred CCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhC---CCCeEEE------ECC
Confidence 44666665 355556677789999886544433210 00112457888887776655543 222 222 234
Q ss_pred CCC-CCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeC------C------------
Q 015894 241 VEG-MVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFH------D------------ 301 (398)
Q Consensus 241 ~~~-r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~H------n------------ 301 (398)
+.+ ..+++...+-+.++.+.|++.|.|-|. .++.+.|+++.+.- +|+--|.= |
T Consensus 87 fgsy~~s~~~a~~na~rl~kaGa~aVklEdg------~e~~~~I~al~~ag--IpV~gHiGLtPQs~~~~ggf~v~grt~ 158 (275)
T 1o66_A 87 FGAYQQSKEQAFAAAAELMAAGAHMVKLEGG------VWMAETTEFLQMRG--IPVCAHIGLTPQSVFAFGGYKVQGRGG 158 (275)
T ss_dssp TTSSSSCHHHHHHHHHHHHHTTCSEEEEECS------GGGHHHHHHHHHTT--CCEEEEEESCGGGTTC-----------
T ss_pred CCCccCCHHHHHHHHHHHHHcCCcEEEECCc------HHHHHHHHHHHHcC--CCeEeeeccCceeecccCCeEEEeChH
Confidence 433 347888888888888899999999997 36777788887642 23333321 1
Q ss_pred ccchHHHHHHHHHHhCCCEE
Q 015894 302 TYGQALSNILASLQMGISTV 321 (398)
Q Consensus 302 d~GlA~ANalaAl~aGa~~V 321 (398)
..--++.-+.+-.+|||+.|
T Consensus 159 ~a~~~i~rA~a~~eAGA~~i 178 (275)
T 1o66_A 159 KAQALLNDAKAHDDAGAAVV 178 (275)
T ss_dssp CHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHHcCCcEE
Confidence 11345667777789999855
No 319
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=85.99 E-value=1.7 Score=40.76 Aligned_cols=90 Identities=16% Similarity=0.192 Sum_probs=67.4
Q ss_pred HHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHH
Q 015894 179 EAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLY 258 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~ 258 (398)
....+.|+..|.+|--- |. +.++.++.+++.|.+.|+.++ -.+-.|.+.+.++.+.+.
T Consensus 175 aml~dmG~~SvKffPM~---------Gl---~~leEl~avAkAca~~g~~lE----------PTGGIdl~Nf~~I~~i~l 232 (275)
T 3m6y_A 175 ALVRDMGGNSLKYFPMK---------GL---AHEEEYRAVAKACAEEGFALE----------PTGGIDKENFETIVRIAL 232 (275)
T ss_dssp HHHHHHTCCEEEECCCT---------TT---TTHHHHHHHHHHHHHHTCEEE----------EBSSCCTTTHHHHHHHHH
T ss_pred HHHHHcCCCeeeEeecC---------Cc---ccHHHHHHHHHHHHHcCceEC----------CCCCccHhHHHHHHHHHH
Confidence 44467899999986321 11 346777888999999998443 234578889999999999
Q ss_pred hCCCCEE-------EEccCcCcCCHHHHHHHHHHHHhhC
Q 015894 259 DMGCSEI-------SLGDTIGVGTPGTVIPMLEAVLDAV 290 (398)
Q Consensus 259 ~~Gad~I-------~L~DT~G~~~P~~v~~lv~~l~~~~ 290 (398)
++|+..| .|--..|.-.|++|++++..+++.+
T Consensus 233 ~aGv~~viPHIYsSIIDk~TG~TrpedV~~ll~~~K~l~ 271 (275)
T 3m6y_A 233 EANVEQVIPHVYSSIIDKETGNTKVEAVRELLAVVKKLV 271 (275)
T ss_dssp HTTCSCBCCEECGGGBCTTTCCBCHHHHHHHHHHHHHHH
T ss_pred HcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHHH
Confidence 9998754 2335679999999999999998754
No 320
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=85.99 E-value=18 Score=34.31 Aligned_cols=14 Identities=14% Similarity=0.287 Sum_probs=8.2
Q ss_pred CCCccHHHHHHHHH
Q 015894 338 SGNVATEDVVYMLN 351 (398)
Q Consensus 338 aGNa~lE~vv~~L~ 351 (398)
.+|..-+.++...+
T Consensus 217 ~an~~P~~~~~l~~ 230 (301)
T 1xky_A 217 ASHVIGNEMQEMIA 230 (301)
T ss_dssp THHHHHHHHHHHHH
T ss_pred HHHhCHHHHHHHHH
Confidence 45666666665544
No 321
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=85.97 E-value=3.8 Score=40.08 Aligned_cols=82 Identities=11% Similarity=0.021 Sum_probs=68.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCC-CCeEEEE-eCCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVP-VDKLAVH-FHDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~l~~H-~Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|+|= +++++-.++++.+.+... .++|-++ ++|+..-++..+..|-++|
T Consensus 47 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~G 126 (343)
T 2v9d_A 47 GQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAG 126 (343)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999996 778888888888887653 4566665 4578888999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.|=+.
T Consensus 127 adavlv~ 133 (343)
T 2v9d_A 127 ADGIVVI 133 (343)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9977554
No 322
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=85.89 E-value=4.5 Score=38.72 Aligned_cols=82 Identities=21% Similarity=0.173 Sum_probs=68.2
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCC-CCeEEEE-eCCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVP-VDKLAVH-FHDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~l~~H-~Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.| .+++++-.++++.+.+... .+|+-++ ++|+..-++..+..|-++|
T Consensus 32 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~G 111 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAG 111 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999988 5677888888888887653 3566554 5678889999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 112 adavlv~ 118 (304)
T 3cpr_A 112 ADGLLVV 118 (304)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9977554
No 323
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=85.88 E-value=12 Score=35.69 Aligned_cols=14 Identities=14% Similarity=0.230 Sum_probs=9.0
Q ss_pred CCCccHHHHHHHHH
Q 015894 338 SGNVATEDVVYMLN 351 (398)
Q Consensus 338 aGNa~lE~vv~~L~ 351 (398)
.+|..-+.++...+
T Consensus 218 ~~n~~P~~~~~l~~ 231 (304)
T 3l21_A 218 IAHLAAGQLRELLS 231 (304)
T ss_dssp THHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHH
Confidence 55776677666554
No 324
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=85.87 E-value=16 Score=35.10 Aligned_cols=15 Identities=27% Similarity=0.202 Sum_probs=9.5
Q ss_pred CCCccHHHHHHHHHh
Q 015894 338 SGNVATEDVVYMLNG 352 (398)
Q Consensus 338 aGNa~lE~vv~~L~~ 352 (398)
++|..-+.++...+.
T Consensus 228 ~an~~P~~~~~l~~a 242 (315)
T 3si9_A 228 SSNVAPKLCAQLHAA 242 (315)
T ss_dssp GGGTCHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHH
Confidence 567766766666553
No 325
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=85.78 E-value=3.9 Score=37.21 Aligned_cols=172 Identities=13% Similarity=0.110 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe--CCHhhHHHHHHcCCCEEEEeccCc
Q 015894 119 VVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT--PNLKGFEAAVAAGAKEVAIFASAS 196 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~--~n~~~ie~a~~~Gv~~v~i~~~~S 196 (398)
.+-+++++.+.+.|++.|++.-..... .....+. +.++.++ ..++.+.+.. ++..+++.++++|++.|.+-..
T Consensus 30 ~~~~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~-~~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~-- 104 (241)
T 1qo2_A 30 KDPVELVEKLIEEGFTLIHVVDLSNAI-ENSGENL-PVLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSK-- 104 (241)
T ss_dssp SCHHHHHHHHHHTTCCCEEEEEHHHHH-HCCCTTH-HHHHHGG-GGGGGEEEESSCCSHHHHHHHHHTTCCEEEECHH--
T ss_pred cCHHHHHHHHHHcCCCEEEEecccccc-cCCchhH-HHHHHHH-hcCCcEEEECCCCCHHHHHHHHHCCCCEEEECch--
Confidence 345789999999999999985221100 0001222 3344444 2344554443 5778899999999999877322
Q ss_pred hHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeec-CCCCCC--CCHHHHHHHHHHHHhCCCCEEEEccCc--
Q 015894 197 ESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVG-CPVEGM--VPPSKVAYVSKQLYDMGCSEISLGDTI-- 271 (398)
Q Consensus 197 d~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg-~~~~~r--~~~~~l~~~a~~l~~~Gad~I~L~DT~-- 271 (398)
.+++- +.++.+++.|-.+...+..-.| ....+. .+.....++++.+.++|++.|.+-++.
T Consensus 105 --------------~l~~p-~~~~~~~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~ 169 (241)
T 1qo2_A 105 --------------VLEDP-SFLKSLREIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKD 169 (241)
T ss_dssp --------------HHHCT-THHHHHHTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHH
T ss_pred --------------HhhCh-HHHHHHHHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCEEEEEeeccc
Confidence 11111 1122225556333322322000 000110 000123455677788999999987742
Q ss_pred CcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH-HHHHHHHHHh
Q 015894 272 GVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA-LSNILASLQM 316 (398)
Q Consensus 272 G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA-~ANalaAl~a 316 (398)
|...... .++++.+++..+ +|+-.= -|.. ..++....++
T Consensus 170 g~~~g~~-~~~i~~l~~~~~-iPvia~----GGI~~~~d~~~~~~~ 209 (241)
T 1qo2_A 170 GTLQEHD-FSLTKKIAIEAE-VKVLAA----GGISSENSLKTAQKV 209 (241)
T ss_dssp HHTCCCC-HHHHHHHHHHHT-CEEEEE----SSCCSHHHHHHHHHH
T ss_pred ccCCcCC-HHHHHHHHHhcC-CcEEEE----CCCCCHHHHHHHHhc
Confidence 3221111 455566665543 344332 3444 3566666666
No 326
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=85.76 E-value=4.2 Score=41.66 Aligned_cols=70 Identities=14% Similarity=0.131 Sum_probs=51.8
Q ss_pred HHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 250 VAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 250 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
..+.++.+.++|++.|.|-=+. ..|....++++.+++.+|+.++....= .....+..+.++||+.|+++.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~--G~~~~~~~~i~~i~~~~~~~pvi~~~v----~t~~~a~~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQ--GNSVYQIAMVHYIKQKYPHLQVIGGNV----VTAAQAKNLIDAGVDGLRVGM 325 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC--CCSHHHHHHHHHHHHHCTTCEEEEEEE----CSHHHHHHHHHHTCSEEEECS
T ss_pred hHHHHHHHHHcCCCEEEeeccC--CcchhHHHHHHHHHHhCCCCceEeccc----chHHHHHHHHHcCCCEEEECC
Confidence 4566778889999999883333 356677899999999998777766311 224457788899999999954
No 327
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=85.66 E-value=15 Score=34.67 Aligned_cols=76 Identities=12% Similarity=0.047 Sum_probs=37.0
Q ss_pred HHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhC-CCCEE--EEccCcCc-CCHHHHHHHHHHHHhhCCC
Q 015894 217 DVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM-GCSEI--SLGDTIGV-GTPGTVIPMLEAVLDAVPV 292 (398)
Q Consensus 217 ~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~-Gad~I--~L~DT~G~-~~P~~v~~lv~~l~~~~p~ 292 (398)
+.++.|++.|.....-+ .|.-.+.+.+.+.+..+.+.+. +...+ .++...|. ++|+.+.++.+ ..|+
T Consensus 86 ~la~~a~~~Gadavlv~-----~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~----~~pn 156 (289)
T 2yxg_A 86 ELSVFAEDVGADAVLSI-----TPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLAE----EYSN 156 (289)
T ss_dssp HHHHHHHHHTCSEEEEE-----CCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH----HCTT
T ss_pred HHHHHHHhcCCCEEEEC-----CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHH----hCCC
Confidence 44566666776643111 3444445666666665555442 44332 34445554 45555555431 2465
Q ss_pred CeEEE-EeCCc
Q 015894 293 DKLAV-HFHDT 302 (398)
Q Consensus 293 ~~l~~-H~Hnd 302 (398)
+ +++ ....|
T Consensus 157 i-vgiK~s~gd 166 (289)
T 2yxg_A 157 I-SAVKEANPN 166 (289)
T ss_dssp E-EEEEECCSC
T ss_pred E-EEEEeCCCC
Confidence 3 555 33344
No 328
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=85.64 E-value=3.3 Score=39.38 Aligned_cols=82 Identities=15% Similarity=0.033 Sum_probs=67.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCC-CCeEEEE-eCCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVP-VDKLAVH-FHDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~l~~H-~Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.| .+++++-.++++.+.+... .+++-+| ++|+..-++..+..|-++|
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~G 95 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVG 95 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 567899999999999999999999999988 4677888888888887653 3566664 5678888999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 96 adavlv~ 102 (294)
T 2ehh_A 96 ADGALVV 102 (294)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9977554
No 329
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=85.64 E-value=3.5 Score=39.11 Aligned_cols=81 Identities=20% Similarity=0.137 Sum_probs=68.1
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGIS 319 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~ 319 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|= +++++-.++++.+.+...+ -|.=-++|+..-++..+..|-++||+
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg~~~t~~ai~la~~A~~~Gad 93 (288)
T 2nuw_A 15 GKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQVGSLNLNDVMELVKFSNEMDIL 93 (288)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECCCSCHHHHHHHHHHHHTSCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEeeCCCCHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999996 6788888888888877765 23335677888899999999999999
Q ss_pred EEeec
Q 015894 320 TVDSS 324 (398)
Q Consensus 320 ~VD~S 324 (398)
.+=+.
T Consensus 94 avlv~ 98 (288)
T 2nuw_A 94 GVSSH 98 (288)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 77554
No 330
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=85.60 E-value=3.5 Score=39.09 Aligned_cols=82 Identities=18% Similarity=0.064 Sum_probs=67.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCC-CCeEEEE-eCCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVP-VDKLAVH-FHDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~l~~H-~Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|- +++++-.++++.+.+... .+++-+| ++|+..-++..+..|-++|
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~G 95 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVG 95 (289)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 5678999999999999999999999999884 677888888888887653 3566554 5678888999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 96 adavlv~ 102 (289)
T 2yxg_A 96 ADAVLSI 102 (289)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9977554
No 331
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=85.56 E-value=9.2 Score=35.25 Aligned_cols=197 Identities=14% Similarity=0.053 Sum_probs=103.9
Q ss_pred HHHHHHHHHHhcCCCEEEEe---cCCCCCcccCCCCHHHHHHHHHhccCCcEEE--EeCCHhhHHHHHHcCCCEEEEecc
Q 015894 120 VKVELIKLLVSSGLAVVEAT---SFVSPKWVPQLADAKDVMAAIQNVEGARFPV--LTPNLKGFEAAVAAGAKEVAIFAS 194 (398)
Q Consensus 120 ~k~~ia~~L~~aGv~~IEvG---~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~--l~~n~~~ie~a~~~Gv~~v~i~~~ 194 (398)
+-+++++.+.+.|++.+=+- .....+ + ... ++++.+.+.....+++ =.|+.++++..+++|++.|-+-..
T Consensus 32 dP~~~a~~~~~~gad~lhvvDld~a~~~~--~--~~~-~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~ 106 (243)
T 4gj1_A 32 NPLKKFKEYEKAGAKELHLVDLTGAKDPS--K--RQF-ALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSM 106 (243)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEHHHHHCGG--G--CCH-HHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTT
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccccc--h--hHH-HHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccc
Confidence 34678899999998866552 110100 1 123 3444443333444443 348999999999999999887432
Q ss_pred CchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc-EEEEEeeeecC-----CCCC-CCCHHHHHHHHHHHHhCCCCEEEE
Q 015894 195 ASESFSKSNINCTIEDSLIRYRDVALAARELSIP-VRGYLSCVVGC-----PVEG-MVPPSKVAYVSKQLYDMGCSEISL 267 (398)
Q Consensus 195 ~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~-v~~~l~~~fg~-----~~~~-r~~~~~l~~~a~~l~~~Gad~I~L 267 (398)
+-. + . +.+ -+.+++.|-. +.+.+-..... -..+ ..+.-.+.+.++.+.+.|+.+|-+
T Consensus 107 a~~---------~-p---~li---~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~ 170 (243)
T 4gj1_A 107 AIK---------D-A---TLC---LEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILC 170 (243)
T ss_dssp TTT---------C-H---HHH---HHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEEEE
T ss_pred ccc---------C-C---chH---HHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEEEe
Confidence 210 0 1 112 2334455532 22222211000 0000 111123456778888999998777
Q ss_pred --ccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHH
Q 015894 268 --GDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATED 345 (398)
Q Consensus 268 --~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~ 345 (398)
.|.-|.+.-..+ ++++.+.+.+|.+|+-..+ |.+...=+..++.++ ++.+.|-.= -.|..++++
T Consensus 171 t~Id~DGt~~G~d~-~l~~~l~~~~~~ipviasG----Gv~~~~Dl~~l~~~~---~gvivg~Al------~~g~i~l~e 236 (243)
T 4gj1_A 171 TDISKDGTMQGVNV-RLYKLIHEIFPNICIQASG----GVASLKDLENLKGIC---SGVIVGKAL------LDGVFSVEE 236 (243)
T ss_dssp EETTC-----CCCH-HHHHHHHHHCTTSEEEEES----CCCSHHHHHHTTTTC---SEEEECHHH------HTTSSCHHH
T ss_pred eeecccccccCCCH-HHHHHHHHhcCCCCEEEEc----CCCCHHHHHHHHccC---chhehHHHH------HCCCCCHHH
Confidence 467888887776 4678888888877877654 333233344455553 334433222 357788888
Q ss_pred HHHHHH
Q 015894 346 VVYMLN 351 (398)
Q Consensus 346 vv~~L~ 351 (398)
++..|.
T Consensus 237 a~~~l~ 242 (243)
T 4gj1_A 237 GIRCLA 242 (243)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 776653
No 332
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=85.54 E-value=4.2 Score=38.52 Aligned_cols=81 Identities=16% Similarity=0.115 Sum_probs=68.6
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGIS 319 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~ 319 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|= +++++-.++++.+.+...+ -+.=-++|+..-++..+..|-++||+
T Consensus 14 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg~~~t~~ai~la~~A~~~Gad 92 (286)
T 2r91_A 14 GRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQVASLNADEAIALAKYAESRGAE 92 (286)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEeeCCCCHHHHHHHHHHHHhcCCC
Confidence 5678899999999999999999999999986 7788888999999988766 23335677888999999999999999
Q ss_pred EEeec
Q 015894 320 TVDSS 324 (398)
Q Consensus 320 ~VD~S 324 (398)
.+=+.
T Consensus 93 avlv~ 97 (286)
T 2r91_A 93 AVASL 97 (286)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 77554
No 333
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=85.42 E-value=4 Score=38.73 Aligned_cols=81 Identities=14% Similarity=0.044 Sum_probs=66.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCC-CCeEEEE-eCCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVP-VDKLAVH-FHDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~l~~H-~Hnd~GlA~ANalaAl~aG 317 (398)
+ .|.+.+.++++.+.+.|++.|.++-|.| .+++++-.++++.+.+... .+++-+| ++|+..-++..+..|-++|
T Consensus 18 g-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~G 96 (291)
T 3a5f_A 18 G-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIG 96 (291)
T ss_dssp S-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred C-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcC
Confidence 5 8999999999999999999999999988 5677888888888887653 3555554 5678888999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=..
T Consensus 97 adavlv~ 103 (291)
T 3a5f_A 97 VDGLLVI 103 (291)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9977554
No 334
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=85.32 E-value=8.6 Score=37.46 Aligned_cols=121 Identities=12% Similarity=-0.033 Sum_probs=69.5
Q ss_pred hHHHHHHcCCCEEEEeccCch--HHHhh---hcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeec-CCCCCC---C--
Q 015894 177 GFEAAVAAGAKEVAIFASASE--SFSKS---NINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVG-CPVEGM---V-- 245 (398)
Q Consensus 177 ~ie~a~~~Gv~~v~i~~~~Sd--~~~~~---~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg-~~~~~r---~-- 245 (398)
.++.+.+.|+..|+|.+.... .+... +.+.| ...+.++.+++.|+++|+.|....-.... .++.++ .
T Consensus 58 ~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t--~~~~~v~~~~~~Ak~~GL~V~l~p~i~~~~g~w~g~i~~~~~ 135 (343)
T 3civ_A 58 SMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVT--VSDDEIASMAELAHALGLKVCLKPTVNCRDGTWRGEIRFEKE 135 (343)
T ss_dssp HHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTB--CCHHHHHHHHHHHHHTTCEEEEEEEEEETTCCCGGGCCCSBS
T ss_pred HHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCC--CCHHHHHHHHHHHHHCCCEEEEEEEeeccCCcccccccccCc
Confidence 455666788888777533211 11100 11111 13466778899999999998643322210 011111 0
Q ss_pred ----CH----------HHHHHHHHHHHhCCCCEEEEccCcC--cCCHHHHHHHHHHHHhhCCCCeEEEEeC
Q 015894 246 ----PP----------SKVAYVSKQLYDMGCSEISLGDTIG--VGTPGTVIPMLEAVLDAVPVDKLAVHFH 300 (398)
Q Consensus 246 ----~~----------~~l~~~a~~l~~~Gad~I~L~DT~G--~~~P~~v~~lv~~l~~~~p~~~l~~H~H 300 (398)
++ .+++.+++.....+++.++|.-=.- .-.+....++++.+|+.+|. +|.++..
T Consensus 136 ~~~~~~~w~~~f~~y~~~i~~~a~~a~~~~V~~~~IGNE~~~~~~~~~~~~~Li~~vR~~~~g-~VTya~~ 205 (343)
T 3civ_A 136 HGPDLESWEAWFGSYSDMMAHYAHVAKRTGCEMFCVGCEMTTAEPHEAMWRETIARVRTEYDG-LVTYNCN 205 (343)
T ss_dssp CCTTSSBHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCTTTTTCHHHHHHHHHHHHHHCCS-EEEEEEE
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHccCCCceEEEECCCCCCCCchHHHHHHHHHHHHhhCCC-CEEEEec
Confidence 11 2344445445567899988864111 12678899999999999987 8888753
No 335
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=85.28 E-value=4.4 Score=38.47 Aligned_cols=82 Identities=11% Similarity=0.105 Sum_probs=68.7
Q ss_pred CCCCHHHHHHHHHHHHh-CCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCC-CCeEEEE-eCCccchHHHHHHHHHHh
Q 015894 243 GMVPPSKVAYVSKQLYD-MGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVP-VDKLAVH-FHDTYGQALSNILASLQM 316 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~-~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~l~~H-~Hnd~GlA~ANalaAl~a 316 (398)
+..|.+.+.++++.+.+ .|++.|.++-|.|- +++++-.++++.+.+... .+++-+| ++|+..-++..+..|-++
T Consensus 19 g~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~ 98 (293)
T 1f6k_A 19 GTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATEL 98 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhc
Confidence 57899999999999999 99999999999986 778888888888887653 4566554 567888899999999999
Q ss_pred CCCEEeec
Q 015894 317 GISTVDSS 324 (398)
Q Consensus 317 Ga~~VD~S 324 (398)
||+.+=+.
T Consensus 99 Gadavlv~ 106 (293)
T 1f6k_A 99 GYDCLSAV 106 (293)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEC
Confidence 99977554
No 336
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=85.15 E-value=4.9 Score=38.63 Aligned_cols=72 Identities=15% Similarity=0.208 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcc--C----cCcCCHHHHHHHH---HHHHhhCCCCeEEEEeCCccchHHHHHHHHHHh
Q 015894 246 PPSKVAYVSKQLYDMGCSEISLGD--T----IGVGTPGTVIPML---EAVLDAVPVDKLAVHFHDTYGQALSNILASLQM 316 (398)
Q Consensus 246 ~~~~l~~~a~~l~~~Gad~I~L~D--T----~G~~~P~~v~~lv---~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~a 316 (398)
+++...+.++++.+.|||.|-|.= | ..+...+++.+++ +.+++.+ +++|.+.+.+ ..-+.+|+++
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vpiSIDT~~-----~~V~~aAl~a 134 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLPISIDTYK-----AEVAKQAIEA 134 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSCEEEECSC-----HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CceEEEeCCC-----HHHHHHHHHc
Confidence 567888889999999999988873 2 1222245555444 7777665 5679998764 3556788889
Q ss_pred CCCEEee
Q 015894 317 GISTVDS 323 (398)
Q Consensus 317 Ga~~VD~ 323 (398)
|+++|+-
T Consensus 135 Ga~iINd 141 (297)
T 1tx2_A 135 GAHIIND 141 (297)
T ss_dssp TCCEEEE
T ss_pred CCCEEEE
Confidence 9999954
No 337
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=85.12 E-value=8.5 Score=37.66 Aligned_cols=124 Identities=15% Similarity=0.066 Sum_probs=76.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeec--C-----------------------CCC-----C------CCCHH
Q 015894 205 NCTIEDSLIRYRDVALAARELSIPVRGYLSCVVG--C-----------------------PVE-----G------MVPPS 248 (398)
Q Consensus 205 ~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg--~-----------------------~~~-----~------r~~~~ 248 (398)
+...++.++..+++++.++++|-.+.+.|...-- . |-. + ..+.+
T Consensus 72 ~i~~d~~i~~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt~~ 151 (363)
T 3l5l_A 72 GIWSDAHAQAFVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMTLD 151 (363)
T ss_dssp BCSSHHHHHHHHHHHHHHHHTTCEEEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCCEECCHH
T ss_pred eecCHHHHHHHHHHHHHHHhcCCEEEEEeccCCccccccccccccccccccccCCCcccCCCCCccCCCCCCCCccCCHH
Confidence 3344567888889999999999888777765310 0 000 0 02223
Q ss_pred -------HHHHHHHHHHhCCCCEEEEc-------------------cCcCcCC---HHHHHHHHHHHHhhCC-CCeEEEE
Q 015894 249 -------KVAYVSKQLYDMGCSEISLG-------------------DTIGVGT---PGTVIPMLEAVLDAVP-VDKLAVH 298 (398)
Q Consensus 249 -------~l~~~a~~l~~~Gad~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p-~~~l~~H 298 (398)
.+.+.++.+.++|.|.|-|- |-.|... +.-+.++|+++|+.++ +.+|++-
T Consensus 152 eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vR 231 (363)
T 3l5l_A 152 DIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTAR 231 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEE
Confidence 44455667778899987764 4444322 2346789999999885 5567775
Q ss_pred eCCc----cc-h----HHHHHHHHHHhCCCEEeeccccC
Q 015894 299 FHDT----YG-Q----ALSNILASLQMGISTVDSSVSGL 328 (398)
Q Consensus 299 ~Hnd----~G-l----A~ANalaAl~aGa~~VD~Sv~Gl 328 (398)
..-+ -| . ++.-+...-++|++.|+++..+.
T Consensus 232 is~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~ 270 (363)
T 3l5l_A 232 FGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFT 270 (363)
T ss_dssp EEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred ecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcc
Confidence 5421 13 2 23333344578999999987554
No 338
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=85.10 E-value=18 Score=32.56 Aligned_cols=102 Identities=10% Similarity=-0.041 Sum_probs=66.7
Q ss_pred hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 015894 176 KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSK 255 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~ 255 (398)
+-++.+.++|.+.|-++.. +. ....+. +.+.++.+.+++.|+.+.. +.... . ...+.+.+.++
T Consensus 34 ~~l~~~~~~G~~~vEl~~~----~~--~~~~~~----~~~~~~~~~l~~~gl~i~~-~~~~~--~----~~~~~~~~~i~ 96 (257)
T 3lmz_A 34 TTLKTLERLDIHYLCIKDF----HL--PLNSTD----EQIRAFHDKCAAHKVTGYA-VGPIY--M----KSEEEIDRAFD 96 (257)
T ss_dssp HHHHHHHHTTCCEEEECTT----TS--CTTCCH----HHHHHHHHHHHHTTCEEEE-EEEEE--E----CSHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecc----cC--CCCCCH----HHHHHHHHHHHHcCCeEEE-Eeccc--c----CCHHHHHHHHH
Confidence 3467888999999998754 10 112232 2345566777899998763 22211 1 36788999999
Q ss_pred HHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCC
Q 015894 256 QLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHD 301 (398)
Q Consensus 256 ~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hn 301 (398)
.+.++|++.|.+. .| ...+.++.....+ . ++.|.+|.|+
T Consensus 97 ~A~~lGa~~v~~~--p~---~~~l~~l~~~a~~-~-gv~l~lEn~~ 135 (257)
T 3lmz_A 97 YAKRVGVKLIVGV--PN---YELLPYVDKKVKE-Y-DFHYAIHLHG 135 (257)
T ss_dssp HHHHHTCSEEEEE--EC---GGGHHHHHHHHHH-H-TCEEEEECCC
T ss_pred HHHHhCCCEEEec--CC---HHHHHHHHHHHHH-c-CCEEEEecCC
Confidence 9999999998873 12 3555555555543 3 3679999996
No 339
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=84.96 E-value=14 Score=35.72 Aligned_cols=75 Identities=7% Similarity=-0.137 Sum_probs=37.2
Q ss_pred HHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhC-CCCEE--EEccCcCc-CCHHHHHHHHHHHHhhCCC
Q 015894 217 DVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM-GCSEI--SLGDTIGV-GTPGTVIPMLEAVLDAVPV 292 (398)
Q Consensus 217 ~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~-Gad~I--~L~DT~G~-~~P~~v~~lv~~l~~~~p~ 292 (398)
+.++.|++.|..... ...|.-.+.+.+.+.+..+.+.+. +...+ .++...|. +.|+.+.++. + .|+
T Consensus 120 ~la~~A~~~Gadavl-----v~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La----~-~pn 189 (332)
T 2r8w_A 120 ALAKDAEAAGADALL-----LAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLA----Y-IPN 189 (332)
T ss_dssp HHHHHHHHHTCSEEE-----ECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHH----T-STT
T ss_pred HHHHHHHhcCCCEEE-----ECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH----c-CCC
Confidence 445666667766431 113444455666666666555443 44432 23444554 4555555543 2 465
Q ss_pred CeEEE-EeCCc
Q 015894 293 DKLAV-HFHDT 302 (398)
Q Consensus 293 ~~l~~-H~Hnd 302 (398)
+ +++ ....|
T Consensus 190 I-vgiKdssgd 199 (332)
T 2r8w_A 190 I-RAIKMPLPA 199 (332)
T ss_dssp E-EEEEECCCT
T ss_pred E-EEEEeCCCC
Confidence 3 555 44444
No 340
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=84.92 E-value=3.7 Score=39.02 Aligned_cols=81 Identities=17% Similarity=0.141 Sum_probs=68.3
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGIS 319 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~ 319 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|= +++++-.++++.+++...+ -|.=-++|+..-++..+..|-++||+
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~A~~~Gad 93 (293)
T 1w3i_A 15 NRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSKDFDIV 93 (293)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHHGGGSCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999986 7788888899998887765 23335677888899999999999999
Q ss_pred EEeec
Q 015894 320 TVDSS 324 (398)
Q Consensus 320 ~VD~S 324 (398)
.+=+.
T Consensus 94 avlv~ 98 (293)
T 1w3i_A 94 GIASY 98 (293)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 77554
No 341
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=84.81 E-value=2.7 Score=40.06 Aligned_cols=32 Identities=6% Similarity=0.077 Sum_probs=14.8
Q ss_pred cCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcE
Q 015894 194 SASESFSKSNINCTIEDSLIRYRDVALAARELSIPV 229 (398)
Q Consensus 194 ~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v 229 (398)
..-|-+...+...+.++.+ ++++...+.|+..
T Consensus 12 tlRDG~Q~~~~~~~~e~k~----~i~~~L~~~Gv~~ 43 (298)
T 2cw6_A 12 GPRDGLQNEKNIVSTPVKI----KLIDMLSEAGLSV 43 (298)
T ss_dssp TTTHHHHTCSSCCCHHHHH----HHHHHHHHTTCSE
T ss_pred CCCcccCCCCCCCCHHHHH----HHHHHHHHcCcCE
Confidence 3444443334445555444 3334444556643
No 342
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=84.74 E-value=17 Score=34.09 Aligned_cols=136 Identities=18% Similarity=0.150 Sum_probs=82.3
Q ss_pred EEEEeCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHH-hCCCcEEEEEeeeecCCCC--CC
Q 015894 168 FPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAAR-ELSIPVRGYLSCVVGCPVE--GM 244 (398)
Q Consensus 168 l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak-~~G~~v~~~l~~~fg~~~~--~r 244 (398)
+-+.+-+..+...|.+.|+++|-+....+. =|.|+.-.+ ++.++ ...++|.+-|= |-. .-
T Consensus 4 lEvc~~s~~~a~~A~~~GAdRIELc~~L~~------GGlTPS~g~------i~~~~~~~~ipv~vMIR-----PR~GdF~ 66 (256)
T 1twd_A 4 LEICCYSMECALTAQQNGADRVELCAAPKE------GGLTPSLGV------LKSVRQRVTIPVHPIIR-----PRGGDFC 66 (256)
T ss_dssp EEEEESSHHHHHHHHHTTCSEEEECBCGGG------TCBCCCHHH------HHHHHHHCCSCEEEBCC-----SSSSCSC
T ss_pred EEEEeCCHHHHHHHHHcCCCEEEEcCCccc------CCCCCCHHH------HHHHHHHcCCceEEEEC-----CCCCCCc
Confidence 345667889999999999999999865432 133433221 22223 34677763221 322 24
Q ss_pred CCHHHHHH---HHHHHHhCCCCEEEEc--cCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchH-HHHHHHHHHhCC
Q 015894 245 VPPSKVAY---VSKQLYDMGCSEISLG--DTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQA-LSNILASLQMGI 318 (398)
Q Consensus 245 ~~~~~l~~---~a~~l~~~Gad~I~L~--DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA-~ANalaAl~aGa 318 (398)
|+.+++.. -++.+.++|++.|.+. +.-|...-..+.++++... +.++.||-=-|.=-- ....-..++.|+
T Consensus 67 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~----~~~vTFHRAfD~~~d~~~ale~L~~lG~ 142 (256)
T 1twd_A 67 YSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAG----PLAVTFHRAFDMCANPLYTLNNLAELGI 142 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT----TSEEEECGGGGGCSCHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC----CCcEEEECchhccCCHHHHHHHHHHcCC
Confidence 66655554 4567788999987653 5566666677888876543 356777755443211 122233346799
Q ss_pred CEEeec
Q 015894 319 STVDSS 324 (398)
Q Consensus 319 ~~VD~S 324 (398)
++|=||
T Consensus 143 ~rILTS 148 (256)
T 1twd_A 143 ARVLTS 148 (256)
T ss_dssp CEEEEC
T ss_pred CEEECC
Confidence 999866
No 343
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=84.72 E-value=16 Score=33.61 Aligned_cols=166 Identities=14% Similarity=0.137 Sum_probs=0.0
Q ss_pred hcCCCEEEEecCCCCCcccCCCCHHHHHHHHH---hccCCcEEEEeCC---------------HhhHHHHHHcCCCEEEE
Q 015894 130 SSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ---NVEGARFPVLTPN---------------LKGFEAAVAAGAKEVAI 191 (398)
Q Consensus 130 ~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~---~~~~~~l~~l~~n---------------~~~ie~a~~~Gv~~v~i 191 (398)
+.|.+.||+=.-...... .-.-.+++.++ +..++.+.+|.|. ..|++.+.+.|++.|-+
T Consensus 19 ~~GAdRIELc~~L~~GGl---TPS~g~i~~~~~~~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~ 95 (224)
T 2bdq_A 19 KAIISRVELCDNLAVGGT---TPSYGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVL 95 (224)
T ss_dssp TTTCCEEEEEBCGGGTCB---CCCHHHHHHHHHHHHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HcCCCEEEEcCCcccCCc---CCCHHHHHHHHHhhhhcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEE
Q ss_pred eccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCc
Q 015894 192 FASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTI 271 (398)
Q Consensus 192 ~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~ 271 (398)
-+=..|-.+.. +.++++++.|+ |+.++ +-.+| .........+..+.+.++|+++|- |.
T Consensus 96 G~Lt~dg~iD~----------~~~~~Li~~a~--~~~vT--FHRAF-----D~~~~~d~~~ale~L~~lGv~rIL---TS 153 (224)
T 2bdq_A 96 GILTSNNHIDT----------EAIEQLLPATQ--GLPLV--FHMAF-----DVIPKSDQKKSIDQLVALGFTRIL---LH 153 (224)
T ss_dssp CCBCTTSSBCH----------HHHHHHHHHHT--TCCEE--ECGGG-----GGSCTTTHHHHHHHHHHTTCCEEE---EC
T ss_pred eeECCCCCcCH----------HHHHHHHHHhC--CCeEE--EECch-----hccCCcCHHHHHHHHHHcCCCEEE---CC
Q ss_pred CcCCH---HHHHHHHHHHHhhC-CCCeEEEEeCCccchHHHHHHHHH-HhCCCEEeec
Q 015894 272 GVGTP---GTVIPMLEAVLDAV-PVDKLAVHFHDTYGQALSNILASL-QMGISTVDSS 324 (398)
Q Consensus 272 G~~~P---~~v~~lv~~l~~~~-p~~~l~~H~Hnd~GlA~ANalaAl-~aGa~~VD~S 324 (398)
|.... .+=.+.++.+.+.. +.+.|-.=+ |.-..|.-.-+ ..|++.++.|
T Consensus 154 G~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~Gg----GV~~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 154 GSSNGEPIIENIKHIKALVEYANNRIEIMVGG----GVTAENYQYICQETGVKQAHGT 207 (224)
T ss_dssp SCSSCCCGGGGHHHHHHHHHHHTTSSEEEECS----SCCTTTHHHHHHHHTCCEEEET
T ss_pred CCCCCCcHHHHHHHHHHHHHhhCCCeEEEeCC----CCCHHHHHHHHHhhCCCEEccc
No 344
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=84.70 E-value=16 Score=34.55 Aligned_cols=15 Identities=13% Similarity=0.246 Sum_probs=9.6
Q ss_pred CCCccHHHHHHHHHh
Q 015894 338 SGNVATEDVVYMLNG 352 (398)
Q Consensus 338 aGNa~lE~vv~~L~~ 352 (398)
.+|..-+.++...+.
T Consensus 208 ~~n~~P~~~~~l~~a 222 (292)
T 3daq_A 208 IANVIPKEFQALYDA 222 (292)
T ss_dssp GGGTCHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHH
Confidence 556666777666654
No 345
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=84.59 E-value=4.2 Score=41.14 Aligned_cols=163 Identities=13% Similarity=0.066 Sum_probs=103.8
Q ss_pred hHHHHHHcCCCEEEEeccCchH----HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC-----------
Q 015894 177 GFEAAVAAGAKEVAIFASASES----FSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV----------- 241 (398)
Q Consensus 177 ~ie~a~~~Gv~~v~i~~~~Sd~----~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~----------- 241 (398)
-++...++|+-.|+|-+.+... |...+-=.+.+++.++++.+.+.++..|..+.+ +.- ....-
T Consensus 172 tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~I-iAR-TDa~aa~l~~s~~d~r 249 (435)
T 3lg3_A 172 LMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLL-IAR-TDADAADLLTSDCDPY 249 (435)
T ss_dssp HHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEE-EEE-ECTTTCCEESCCCCGG
T ss_pred HHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEE-EEE-cCCccccccccccccc
Confidence 4677789999999999886421 111111136889999998777776666654321 111 10000
Q ss_pred -----CC----------CCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccc--
Q 015894 242 -----EG----------MVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYG-- 304 (398)
Q Consensus 242 -----~~----------r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~G-- 304 (398)
.+ +...+..++=++...+ |||.|.+- .|.-+++++..+.+.++..+|...+.+-+--.+.
T Consensus 250 D~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E--~~~~~~~ei~~f~~~v~~~~P~~~La~~~sPsfnw~ 326 (435)
T 3lg3_A 250 DREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCE--TSTPDLALAKRFADAVHAQFPGKLLAYNCSPSFNWK 326 (435)
T ss_dssp GGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEEC--CSSCCHHHHHHHHHHHHHHSTTCEEEEECCSSSCHH
T ss_pred cchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEec--CCCCCHHHHHHHHHHhccccCCeEEEeCCCCCcccc
Confidence 00 1345666666666666 99999872 2456899999999999988897666653322222
Q ss_pred --hH---HHH-HHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q 015894 305 --QA---LSN-ILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNG 352 (398)
Q Consensus 305 --lA---~AN-alaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~ 352 (398)
+. +++ .-.--++|+.++=.++.|+ ++-+.+++++...+.+
T Consensus 327 ~~~~d~~~~~f~~eLa~lG~~~v~~~la~~--------raa~~a~~~~a~~~~~ 372 (435)
T 3lg3_A 327 KNLTDQQIASFQDELSAMGYKYQFITLAGI--------HSMWFNMFDLAHAYAQ 372 (435)
T ss_dssp HHSCHHHHHHHHHHHHHTTEEEEEETTHHH--------HHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCcEEEeCcHHH--------HHHHHHHHHHHHHHHh
Confidence 11 111 1222358999999998888 7778889999888876
No 346
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=84.58 E-value=29 Score=33.23 Aligned_cols=172 Identities=10% Similarity=0.094 Sum_probs=106.3
Q ss_pred HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHH-HhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHH
Q 015894 178 FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAA-RELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQ 256 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~a-k~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~ 256 (398)
+++..+.+.+.|.|..... +.+++..++ ++..+ ++.|+++..+++|. + .+.+.+.+....
T Consensus 45 ~~~l~~l~p~fvsVT~gag--------g~~r~~t~~----~a~~i~~~~g~~~v~Hltc~----~---~~~~~l~~~L~~ 105 (304)
T 3fst_A 45 IDRLSSLKPKFVSVTYGAN--------SGERDRTHS----IIKGIKDRTGLEAAPHLTCI----D---ATPDELRTIARD 105 (304)
T ss_dssp HHHHHTTCCSEEEECCCTT--------SSCHHHHHH----HHHHHHHHHCCCEEEEEEST----T---SCHHHHHHHHHH
T ss_pred HHHHhcCCCCEEEEeeCCC--------CcchhHHHH----HHHHHHHHhCCCeeEEeecC----C---CCHHHHHHHHHH
Confidence 4555667888888876533 234444443 34333 45899999889852 2 477888888888
Q ss_pred HHhCCCCE-EEE-ccCcCc--CCHHHHHHHHHHHHhhCCCCeEEEEe----CCc---cchHHHHHHHHHHhCCCEEeecc
Q 015894 257 LYDMGCSE-ISL-GDTIGV--GTPGTVIPMLEAVLDAVPVDKLAVHF----HDT---YGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 257 l~~~Gad~-I~L-~DT~G~--~~P~~v~~lv~~l~~~~p~~~l~~H~----Hnd---~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
+.++|++. +.| .|.... .......++|+.+++. ++..|++=+ |-. ...-+.+...=++|||+.+=|-.
T Consensus 106 ~~~~GI~nILaLrGDpp~~~~~~~~~A~dLv~~ir~~-~~f~IgvA~yPE~Hp~a~~~~~d~~~Lk~KvdAGAdf~iTQ~ 184 (304)
T 3fst_A 106 YWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEV-ADFDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQF 184 (304)
T ss_dssp HHHTTCCEEEEECCCCC------CCCHHHHHHHHHHH-CCCEEEEEECTTCCTTCSCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred HHHCCCCEEEEecCCCCCCCCCCCCCHHHHHHHHHHc-CCCeEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEeCc
Confidence 99999985 556 564322 1234577888888765 333455543 332 23346666777899999887765
Q ss_pred ccCCCCCCCCCCCCCccHHHHHHHHHhCCCCC----ccC-hHHHHHHHHHHHHHhCCCCCC
Q 015894 326 SGLGGCPYAKGASGNVATEDVVYMLNGLGVRT----NVD-IRKLMIAGDFICKHLGRTSGS 381 (398)
Q Consensus 326 ~GlGecp~a~graGNa~lE~vv~~L~~~Gi~t----~iD-l~~L~~~~~~v~~~~g~~~~~ 381 (398)
. --+-..+.++..++..|++. ||= +.....+..+ .+..|..+|.
T Consensus 185 f-----------fD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~-~~~~Gv~iP~ 233 (304)
T 3fst_A 185 F-----------FDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKL-ADMTNVRIPA 233 (304)
T ss_dssp C-----------SCHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHH-HHHHTCCCCH
T ss_pred c-----------CCHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHH-HHcCCCcCCH
Confidence 4 22556677777777777653 221 2333333333 5777888874
No 347
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=84.56 E-value=2.7 Score=37.18 Aligned_cols=74 Identities=15% Similarity=0.137 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEE--EeCCccchHHHHHHHHHHhCCCEEe
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAV--HFHDTYGQALSNILASLQMGISTVD 322 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~--H~Hnd~GlA~ANalaAl~aGa~~VD 322 (398)
.+.+...++++.+.+ |++.|-+.|.. ..+. -.++++.+++.+|+.++.+ -.|| .+.- -+-.|.++||+.|.
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev~~~~--~~~~-g~~~i~~l~~~~~~~~i~~~l~~~d-i~~~--~~~~a~~~Gad~v~ 82 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIELGTPL--IKAE-GLSVITAVKKAHPDKIVFADMKTMD-AGEL--EADIAFKAGADLVT 82 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEECHHH--HHHH-CTHHHHHHHHHSTTSEEEEEEEECS-CHHH--HHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHhhc-cCCEEEECcHH--HHhh-CHHHHHHHHHhCCCCeEEEEEEecC-ccHH--HHHHHHhCCCCEEE
Confidence 468888899988887 89998886632 1222 1346888888876656554 4564 1111 23568899999886
Q ss_pred ecc
Q 015894 323 SSV 325 (398)
Q Consensus 323 ~Sv 325 (398)
+..
T Consensus 83 vh~ 85 (207)
T 3ajx_A 83 VLG 85 (207)
T ss_dssp EET
T ss_pred Eec
Confidence 543
No 348
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=84.52 E-value=3.8 Score=39.11 Aligned_cols=37 Identities=30% Similarity=0.604 Sum_probs=19.2
Q ss_pred HhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHH---hCCCC
Q 015894 315 QMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLN---GLGVR 356 (398)
Q Consensus 315 ~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~---~~Gi~ 356 (398)
+.|.. |.+.+.=..+||+. |-.+.|.++..++ +.|.+
T Consensus 135 ~~G~~-V~~~l~~~~~~e~~----~~~~~~~~~~~~~~~~~~G~d 174 (302)
T 2ftp_A 135 QHQVR-VRGYISCVLGCPYD----GDVDPRQVAWVARELQQMGCY 174 (302)
T ss_dssp HTTCE-EEEEEECTTCBTTT----BCCCHHHHHHHHHHHHHTTCS
T ss_pred HCCCe-EEEEEEEEeeCCcC----CCCCHHHHHHHHHHHHHcCCC
Confidence 45554 55555555556654 2445555555554 45553
No 349
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=84.42 E-value=2.3 Score=40.66 Aligned_cols=82 Identities=11% Similarity=0.111 Sum_probs=68.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHHHHHHhhCC-CCeEEEE-eCCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPMLEAVLDAVP-VDKLAVH-FHDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~l~~H-~Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.|= ++.++-.++++.+.+... .++|-++ ++|+..-++..+..|-++|
T Consensus 20 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 99 (300)
T 3eb2_A 20 GRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLG 99 (300)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999995 778888888888887653 3456555 4788999999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 100 adavlv~ 106 (300)
T 3eb2_A 100 ADGILAI 106 (300)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9977553
No 350
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=84.42 E-value=12 Score=35.21 Aligned_cols=14 Identities=21% Similarity=0.105 Sum_probs=9.4
Q ss_pred CCCccHHHHHHHHH
Q 015894 338 SGNVATEDVVYMLN 351 (398)
Q Consensus 338 aGNa~lE~vv~~L~ 351 (398)
.+|..-+.++...+
T Consensus 197 ~an~~P~~~~~l~~ 210 (286)
T 2r91_A 197 SANYLPELLAGIRD 210 (286)
T ss_dssp GGTTCHHHHHHHHH
T ss_pred HHHhCHHHHHHHHH
Confidence 56777777766654
No 351
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=84.38 E-value=21 Score=33.82 Aligned_cols=180 Identities=12% Similarity=0.078 Sum_probs=102.1
Q ss_pred CHHHHHHHHHHHHhcC----CCEEEEecCCC-CCccc-CCC--CHHHHHHHHHhc---cCCcEEEEeCCHhhHHHHHHcC
Q 015894 117 PAVVKVELIKLLVSSG----LAVVEATSFVS-PKWVP-QLA--DAKDVMAAIQNV---EGARFPVLTPNLKGFEAAVAAG 185 (398)
Q Consensus 117 ~~~~k~~ia~~L~~aG----v~~IEvG~~~~-~~~~p-~~~--D~~~v~~~i~~~---~~~~l~~l~~n~~~ie~a~~~G 185 (398)
+.+.-+++++.|.++| +..+=-.+|-. |+--| .+. +.++-++.+++. .+..+..=......++.+.+.
T Consensus 27 ~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~~~~g~~l~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~- 105 (280)
T 2qkf_A 27 SLDSTLQTCAHYVEVTRKLGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEV- 105 (280)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEEEESCCSSCSSSSSCCCSCHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-
T ss_pred CHHHHHHHHHHHHHhhhhcceeEEEeeeeecCCCCChHHhhccchHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhh-
Confidence 7888899999998876 44222222221 21111 111 223334444432 244443333467778877777
Q ss_pred CCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHhCCCCE
Q 015894 186 AKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGM-VPPSKVAYVSKQLYDMGCSE 264 (398)
Q Consensus 186 v~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r-~~~~~l~~~a~~l~~~Gad~ 264 (398)
++.+.|-.. ++..- ++.+++.+.|.+|. +. .+. .+++.+...++.+...|.+.
T Consensus 106 ~d~~kIga~----------~~~n~-------~ll~~~a~~~kPV~--lk-------~G~~~t~~e~~~A~~~i~~~Gn~~ 159 (280)
T 2qkf_A 106 CDVIQLPAF----------LARQT-------DLVVAMAKTGNVVN--IK-------KPQFLSPSQMKNIVEKFHEAGNGK 159 (280)
T ss_dssp CSEEEECGG----------GTTBH-------HHHHHHHHTCCEEE--EE-------CCTTSCGGGHHHHHHHHHHTTCCC
T ss_pred CCEEEECcc----------cccCH-------HHHHHHHcCCCcEE--EE-------CCCCCCHHHHHHHHHHHHHcCCCe
Confidence 898888532 11111 13444456788875 33 122 36788888888888999876
Q ss_pred EEEccCcCcCCHH-----HHHHHHHHHHhhCCCCeEEE-EeCCc----------cc---hHHHHHHHHHHhCCC--EEee
Q 015894 265 ISLGDTIGVGTPG-----TVIPMLEAVLDAVPVDKLAV-HFHDT----------YG---QALSNILASLQMGIS--TVDS 323 (398)
Q Consensus 265 I~L~DT~G~~~P~-----~v~~lv~~l~~~~p~~~l~~-H~Hnd----------~G---lA~ANalaAl~aGa~--~VD~ 323 (398)
+.|+--.+.. |. .+. -+..+++.+|..+|++ =.|-+ .| +...-+.+|+..||+ +|+.
T Consensus 160 i~L~~rg~~~-~~~~~~~dl~-~i~~lk~~~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~ 237 (280)
T 2qkf_A 160 LILCERGSSF-GYDNLVVDML-GFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLES 237 (280)
T ss_dssp EEEEECCEEC-STTCEECCTT-HHHHHHHHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred EEEEECCCCC-CCCccccCHH-HHHHHHHhCCCCCEEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEee
Confidence 6666544332 32 233 4567888876678999 33332 34 346667888999996 6655
Q ss_pred cc
Q 015894 324 SV 325 (398)
Q Consensus 324 Sv 325 (398)
=+
T Consensus 238 H~ 239 (280)
T 2qkf_A 238 HP 239 (280)
T ss_dssp --
T ss_pred cC
Confidence 43
No 352
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=84.32 E-value=5.7 Score=38.18 Aligned_cols=109 Identities=15% Similarity=0.052 Sum_probs=71.6
Q ss_pred EeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCH------HHHHHHHHHHHhhCCCC----eEEEEeCCc
Q 015894 233 LSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTP------GTVIPMLEAVLDAVPVD----KLAVHFHDT 302 (398)
Q Consensus 233 l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P------~~v~~lv~~l~~~~p~~----~l~~H~Hnd 302 (398)
++.+.|.|.. ..+.+.-+.-++.+.+.||+.|-+.=-.|.+.- ..+++-|+.+++..++. .|+.-.=++
T Consensus 86 V~tVigFP~G-~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~Lt~ 164 (297)
T 4eiv_A 86 VCAAVNFPEG-TGTPDTVSLEAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGELQG 164 (297)
T ss_dssp EEEEESTTTC-CCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCCCC
T ss_pred EEEEecCCCC-CCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccCCc
Confidence 3444567854 455554444577788899999988877777544 45677777777765432 123233344
Q ss_pred cchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHH
Q 015894 303 YGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLN 351 (398)
Q Consensus 303 ~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~ 351 (398)
..+-...+..|+++||+.|-+|-+ . .+|++.+|++..+++
T Consensus 165 ~e~i~~A~~ia~~AGADFVKTSTG-f--------~~~gAT~edV~lM~~ 204 (297)
T 4eiv_A 165 GDIISRAAVAALEGGADFLQTSSG-L--------GATHATMFTVHLISI 204 (297)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCCS-S--------SSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCC-C--------CCCCCCHHHHHHHHH
Confidence 444345678889999999999864 3 345788888877664
No 353
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=84.31 E-value=2.4 Score=39.96 Aligned_cols=67 Identities=15% Similarity=0.193 Sum_probs=46.3
Q ss_pred cCCcEEEEe-CCHhhHHHHHHcCCCEEEEeccCc-hHHH------------hhhcCCC-------HHHHHHHHHHHHHHH
Q 015894 164 EGARFPVLT-PNLKGFEAAVAAGAKEVAIFASAS-ESFS------------KSNINCT-------IEDSLIRYRDVALAA 222 (398)
Q Consensus 164 ~~~~l~~l~-~n~~~ie~a~~~Gv~~v~i~~~~S-d~~~------------~~~~~~s-------~~~~l~~~~~~v~~a 222 (398)
.+++++.++ +..++++.|.+.|++.|-++...= +.+. -..+..+ .++.++++.+++++|
T Consensus 123 ~GIrVSLFIDpd~~qi~aA~~~GAd~IELhTG~YA~a~~~~~sn~~~~~~~~~~l~~~~~~~~~~~~~el~~l~~aA~~A 202 (260)
T 3o6c_A 123 ANIEVSLFINPSLEDIEKSKILKAQFIELHTGHYANLHNALFSNISHTAFALKELDQDKKTLQAQFEKELQNLELCAKKG 202 (260)
T ss_dssp TTCEEEEEECSCHHHHHHHHHTTCSEEEECCHHHHHHHHHHHSSGGGSTTCCGGGCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHhCCCEEEEechHhhhhhhccccccccccccccccccccchhhHHHHHHHHHHHHHHHHH
Confidence 366767666 677899999999999999965410 1110 0111122 345688899999999
Q ss_pred HhCCCcEE
Q 015894 223 RELSIPVR 230 (398)
Q Consensus 223 k~~G~~v~ 230 (398)
+++|+.|.
T Consensus 203 ~~lGL~Vn 210 (260)
T 3o6c_A 203 LELGLKVA 210 (260)
T ss_dssp HHTTCEEE
T ss_pred HHcCCEEe
Confidence 99999987
No 354
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=84.25 E-value=15 Score=35.66 Aligned_cols=78 Identities=13% Similarity=0.066 Sum_probs=42.8
Q ss_pred HHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhC-CCCEE--EEccCcCc-CCHHHHHHHHHHHHhhCC
Q 015894 216 RDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM-GCSEI--SLGDTIGV-GTPGTVIPMLEAVLDAVP 291 (398)
Q Consensus 216 ~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~-Gad~I--~L~DT~G~-~~P~~v~~lv~~l~~~~p 291 (398)
.+.++.|++.|.....-+ .|.-.+.+.+.+.+..+.+.+. +...+ .++...|. ++|+.+.++.+ ..|
T Consensus 116 i~la~~A~~~Gadavlv~-----~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~----~~p 186 (343)
T 2v9d_A 116 IELSQHAQQAGADGIVVI-----NPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLAD----SRS 186 (343)
T ss_dssp HHHHHHHHHHTCSEEEEE-----CCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHH----HCT
T ss_pred HHHHHHHHhcCCCEEEEC-----CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHH----hCC
Confidence 345567777787643111 3554455777777777666554 44432 45555665 56666655532 356
Q ss_pred CCeEEE-EeCCcc
Q 015894 292 VDKLAV-HFHDTY 303 (398)
Q Consensus 292 ~~~l~~-H~Hnd~ 303 (398)
++ +++ ....|.
T Consensus 187 nI-vgiKdssgd~ 198 (343)
T 2v9d_A 187 NI-IGIKDTIDSV 198 (343)
T ss_dssp TE-EEEEECCSCH
T ss_pred CE-EEEEeCCCCH
Confidence 63 666 344443
No 355
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=84.22 E-value=19 Score=33.66 Aligned_cols=113 Identities=9% Similarity=0.021 Sum_probs=64.9
Q ss_pred hHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeee-----cCCCC------C--
Q 015894 177 GFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVV-----GCPVE------G-- 243 (398)
Q Consensus 177 ~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~f-----g~~~~------~-- 243 (398)
-++.+.++|.+.|-++... +. .-.+.+ ..++.+.+++.|+.+.. +...+ ..|+. .
T Consensus 34 ~l~~~a~~G~~~VEl~~~~-~~---~~~~~~-------~~~~~~~l~~~GL~v~~-~~~~~~~~~~~~p~~~~~~~~~~~ 101 (303)
T 3l23_A 34 NLRKVKDMGYSKLELAGYG-KG---AIGGVP-------MMDFKKMAEDAGLKIIS-SHVNPVDTSISDPFKAMIFKYSKE 101 (303)
T ss_dssp HHHHHHHTTCCEEEECCEE-TT---EETTEE-------HHHHHHHHHHTTCEEEE-EECCCBCTTCSSTTTTBCCSCCTT
T ss_pred HHHHHHHcCCCEEEecccc-Cc---ccCCCC-------HHHHHHHHHHcCCeEEE-EecccccccccCcccccccccchh
Confidence 4678889999999987421 10 001112 23455677889999853 22111 11111 0
Q ss_pred --CCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhC-----CCCe--EEEEeCC
Q 015894 244 --MVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAV-----PVDK--LAVHFHD 301 (398)
Q Consensus 244 --r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~-----p~~~--l~~H~Hn 301 (398)
....+.+.+.++.+.++|++.|.+.-.....++.....+++.+++.. -++. |.+|-|+
T Consensus 102 ~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~~ 168 (303)
T 3l23_A 102 VTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHN 168 (303)
T ss_dssp THHHHHHHHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEccCc
Confidence 01135666778888899999998852211234555655555555432 2578 9999997
No 356
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=84.17 E-value=16 Score=33.43 Aligned_cols=125 Identities=14% Similarity=0.075 Sum_probs=65.7
Q ss_pred hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeee-cC--------------C
Q 015894 176 KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVV-GC--------------P 240 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~f-g~--------------~ 240 (398)
+-++.+.++|.+.|-+...-.. ..+. +.+.++.+.+++.|+.+... ...+ |. +
T Consensus 25 ~~l~~~~~~G~~~vEl~~~~~~-------~~~~----~~~~~~~~~l~~~gl~~~~~-~~~~~g~~~~~~~~~~~~~~~~ 92 (290)
T 3tva_A 25 VHLEVAQDLKVPTVQVHAPHPH-------TRTR----EHAQAFRAKCDAAGIQVTVI-FGGFDGESYADIPTTARTVGLV 92 (290)
T ss_dssp BCHHHHHHTTCSEEEEECCCGG-------GCSH----HHHHHHHHHHHHTTCEEEEE-ECCCTTCCCSSHHHHHHHSSSC
T ss_pred HHHHHHHHcCCCEEEecCCCCC-------cCCH----HHHHHHHHHHHHcCCEEEEE-eeccCCcccccccccccccCCC
Confidence 4578888899998888753211 1121 23445567777889887642 2111 11 1
Q ss_pred CCC--CCCHHHHHHHHHHHHhCCCCEEEEccCcCcC---CHHHHHHHHHHHHhh---C--CCCeEEEEeCCccchHHHHH
Q 015894 241 VEG--MVPPSKVAYVSKQLYDMGCSEISLGDTIGVG---TPGTVIPMLEAVLDA---V--PVDKLAVHFHDTYGQALSNI 310 (398)
Q Consensus 241 ~~~--r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~---~P~~v~~lv~~l~~~---~--p~~~l~~H~Hnd~GlA~ANa 310 (398)
+.. ....+.+.+.++.+.++|++.|.+. .|.. .......+++.+++. . -++.|.+|.|.+..-.+...
T Consensus 93 ~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~--~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~l 170 (290)
T 3tva_A 93 PLETRASRVAEMKEISDFASWVGCPAIGLH--IGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQESADHLLEF 170 (290)
T ss_dssp STTTHHHHHHHHHHHHHHHHHHTCSEEEEC--CCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCSSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEEc--CCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHH
Confidence 110 0123566677777788899888763 1211 333444444443332 1 24678888886433333333
Q ss_pred HHHH
Q 015894 311 LASL 314 (398)
Q Consensus 311 laAl 314 (398)
+..+
T Consensus 171 ~~~~ 174 (290)
T 3tva_A 171 IEDV 174 (290)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 3333
No 357
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=84.12 E-value=3 Score=39.68 Aligned_cols=82 Identities=16% Similarity=0.014 Sum_probs=67.3
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCC-CCeEEEE-eCCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVP-VDKLAVH-FHDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~l~~H-~Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|.| .+++++-.++++.+.+... .+++-+| ++|+..-++..+..|-++|
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~G 96 (292)
T 2ojp_A 17 GNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSG 96 (292)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999998 5677888888888887653 3555554 5678888899999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 97 adavlv~ 103 (292)
T 2ojp_A 97 IVGCLTV 103 (292)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9977544
No 358
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=84.10 E-value=3.6 Score=37.86 Aligned_cols=68 Identities=15% Similarity=0.115 Sum_probs=54.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEE
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTV 321 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~V 321 (398)
.+++...++++.+.+.|++.|.+.=+ +| ...+.|+.+++++|+..|+.-+=-| ...+..|+++||+.|
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~----t~-~a~~~I~~l~~~~p~~~IGAGTVlt----~~~a~~ai~AGA~fi 89 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLR----TE-AGLAAISAIKKAVPEAIVGAGTVCT----ADDFQKAIDAGAQFI 89 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETT----ST-THHHHHHHHHHHCTTSEEEEECCCS----HHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC----Cc-cHHHHHHHHHHHCCCCeEeeccccC----HHHHHHHHHcCCCEE
Confidence 46789999999999999999988432 34 3456788999999988788865444 567788999999977
No 359
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=84.05 E-value=40 Score=34.39 Aligned_cols=249 Identities=11% Similarity=0.082 Sum_probs=130.3
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc-c-CCcEEEEeCCHhhHH---HHHHcCCCEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV-E-GARFPVLTPNLKGFE---AAVAAGAKEV 189 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~-~-~~~l~~l~~n~~~ie---~a~~~Gv~~v 189 (398)
.++..++..| +...+.|++.|=+.|--++ +|..++.+.+++. . .+.+.+..-+.++++ .-++. .|
T Consensus 169 ~ltekD~~Di-~~~l~~gvD~I~lsfV~sa------eDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~-sD-- 238 (470)
T 1e0t_A 169 ALAEKDKQDL-IFGCEQGVDFVAASFIRKR------SDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEA-SD-- 238 (470)
T ss_dssp SSCHHHHHHH-HHHHHHTCSEEEESSCCSH------HHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHH-SS--
T ss_pred CCCcCCHHHH-HHHHHcCCCEEEECCCCCH------HHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHH-CC--
Confidence 3566676665 5566789999977653222 3444444555443 2 355555555555443 33333 56
Q ss_pred EEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEE-EEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE-
Q 015894 190 AIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRG-YLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL- 267 (398)
Q Consensus 190 ~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~-~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L- 267 (398)
.+++.-.|.-.+ +..++.....+.+++.|+++|+.|-. +=|... .-...+.+..++-+++.... -|+|.+-|
T Consensus 239 gImVargDLgve----ig~e~v~~~qk~ii~~araaGkpvI~ATQMLeS-Mi~~p~PTRAEvsDVanAV~-dG~DavMLS 312 (470)
T 1e0t_A 239 GIMVARGDLGVE----IPVEEVIFAQKMMIEKCIRARKVVITATMMLDS-MIKNPRPTDAEAGDVANAIL-DGTDAVMLS 312 (470)
T ss_dssp EEEEEHHHHHHH----SCHHHHHHHHHHHHHHHHHHTCEEEEECC----------CCCHHHHHHHHHHHH-HTCSEEEEC
T ss_pred EEEECchHhhhh----cCHHHHHHHHHHHHHHHHHcCCCEEEechhhHh-hccCCCccHHHHhhhhHhhh-cCccEEEec
Confidence 444444555333 23466667778899999999998742 111110 11122456677778776554 58999998
Q ss_pred ccCcCcCCHHHHHHHHHHHHhhC----CCC-eEEEE--eCC-ccchHHHHHHHHHHhCCC-EEeeccccCC-----C-CC
Q 015894 268 GDTIGVGTPGTVIPMLEAVLDAV----PVD-KLAVH--FHD-TYGQALSNILASLQMGIS-TVDSSVSGLG-----G-CP 332 (398)
Q Consensus 268 ~DT~G~~~P~~v~~lv~~l~~~~----p~~-~l~~H--~Hn-d~GlA~ANalaAl~aGa~-~VD~Sv~GlG-----e-cp 332 (398)
..|+-.-.|.+..+.+..+..+. ... .+..+ .++ +-..|.+...+|...++. +|-.|-.|-- . .|
T Consensus 313 gETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP 392 (470)
T 1e0t_A 313 GESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFP 392 (470)
T ss_dssp CC------CHHHHHHHHHHHHHHHTTCCCCCC---------CHHHHHHHHHHHHHHTTCSBEEEECSSSHHHHHHHTTCC
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHhhhhhhHHHhhhccccchHHHHHHHHHHHHHhcCCCEEEEECCChhHHHHHHhhCC
Confidence 46777778988777777766443 110 01101 111 223566666677778887 5556666643 1 22
Q ss_pred CCCCCCCCccHHHHHHHHHh-CCCCC-----ccChHHHHHHHHHHHHHhCCCCC
Q 015894 333 YAKGASGNVATEDVVYMLNG-LGVRT-----NVDIRKLMIAGDFICKHLGRTSG 380 (398)
Q Consensus 333 ~a~graGNa~lE~vv~~L~~-~Gi~t-----~iDl~~L~~~~~~v~~~~g~~~~ 380 (398)
-+|- -.-.+-+.+...|.- .|+.+ .-+.+.+.+.+....+..|+--+
T Consensus 393 ~~pI-~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~~ 445 (470)
T 1e0t_A 393 DATI-LALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHK 445 (470)
T ss_dssp SSBE-EEEESCHHHHHHGGGSTTEEEEECSCCCSHHHHHHHHHHHHHHTSSSCT
T ss_pred CCCE-EEECCCHHHHHHhhhhccceEEEecCCCCHHHHHHHHHHHHHHCCCCCC
Confidence 2221 112344677666654 35431 23456666655555555565433
No 360
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=83.91 E-value=5.6 Score=38.17 Aligned_cols=74 Identities=15% Similarity=0.082 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcc--CcCcCCH--HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCE
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGD--TIGVGTP--GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGIST 320 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~D--T~G~~~P--~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~ 320 (398)
.+.+.-+++++.+.++|++.|-+.= +.- ..| .+..++++.+++. |+.++..+.-|. ...-.|+++|++.
T Consensus 25 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~-~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~-----~~i~~a~~~g~~~ 97 (307)
T 1ydo_A 25 IATEDKITWINQLSRTGLSYIEITSFVHPK-WIPALRDAIDVAKGIDRE-KGVTYAALVPNQ-----RGLENALEGGINE 97 (307)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEEECSCTT-TCGGGTTHHHHHHHSCCC-TTCEEEEECCSH-----HHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCcCcc-cccccCCHHHHHHHhhhc-CCCeEEEEeCCH-----HhHHHHHhCCcCE
Confidence 4566777777777777777665531 000 011 1222334443332 555666666442 2355566677776
Q ss_pred Eeecc
Q 015894 321 VDSSV 325 (398)
Q Consensus 321 VD~Sv 325 (398)
|...+
T Consensus 98 v~i~~ 102 (307)
T 1ydo_A 98 ACVFM 102 (307)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66543
No 361
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=83.80 E-value=3.9 Score=41.43 Aligned_cols=69 Identities=16% Similarity=0.235 Sum_probs=49.1
Q ss_pred HHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 251 AYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 251 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
.+.++.+.++|+|.|.+. +++ ..+..+.+.+..+++.+|++++..-.=- ...-+..++++|++.|+++.
T Consensus 235 ~~~a~~l~~~G~d~ivi~-~a~-g~~~~~~~~i~~l~~~~p~~pvi~G~v~----t~~~a~~~~~~Gad~I~vg~ 303 (491)
T 1zfj_A 235 FERAEALFEAGADAIVID-TAH-GHSAGVLRKIAEIRAHFPNRTLIAGNIA----TAEGARALYDAGVDVVKVGI 303 (491)
T ss_dssp HHHHHHHHHHTCSEEEEC-CSC-TTCHHHHHHHHHHHHHCSSSCEEEEEEC----SHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHcCCCeEEEe-eec-CcchhHHHHHHHHHHHCCCCcEeCCCcc----CHHHHHHHHHcCCCEEEECc
Confidence 455777888999998855 444 3556778889999999977666532111 23556678899999999853
No 362
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=83.80 E-value=20 Score=34.16 Aligned_cols=78 Identities=10% Similarity=0.011 Sum_probs=40.4
Q ss_pred HHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhC-CCCE--EEEccCcCc-CCHHHHHHHHHHHHhhCC
Q 015894 216 RDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM-GCSE--ISLGDTIGV-GTPGTVIPMLEAVLDAVP 291 (398)
Q Consensus 216 ~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~-Gad~--I~L~DT~G~-~~P~~v~~lv~~l~~~~p 291 (398)
.+.++.|++.|.....-+ .|.-.+.+.+.+.+..+.+.+. +... -.++...|. ++|+.+.++.+ ..|
T Consensus 97 i~la~~A~~~Gadavlv~-----~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~----~~p 167 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVV-----TPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAA----DLK 167 (306)
T ss_dssp HHHHHHHHHHTCSEEEEE-----CCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHH----HCT
T ss_pred HHHHHHHHhcCCCEEEEC-----CCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHH----hCC
Confidence 344566667777643111 3444455667777666666553 3333 234555664 55555555532 246
Q ss_pred CCeEEE-EeCCcc
Q 015894 292 VDKLAV-HFHDTY 303 (398)
Q Consensus 292 ~~~l~~-H~Hnd~ 303 (398)
++ +++ ....|.
T Consensus 168 nI-vgiKdssgd~ 179 (306)
T 1o5k_A 168 NV-VGIXEANPDI 179 (306)
T ss_dssp TE-EEEEECCCCH
T ss_pred CE-EEEeCCCCCH
Confidence 53 555 444443
No 363
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=83.72 E-value=20 Score=34.17 Aligned_cols=72 Identities=13% Similarity=0.039 Sum_probs=39.3
Q ss_pred HHHHHHHHhCCCcEEEEEeeeecCCCC---CCCCHHHHHHHHHHHHh-CCCCE--EEEccCcCc-CCHHHHHHHHHHHHh
Q 015894 216 RDVALAARELSIPVRGYLSCVVGCPVE---GMVPPSKVAYVSKQLYD-MGCSE--ISLGDTIGV-GTPGTVIPMLEAVLD 288 (398)
Q Consensus 216 ~~~v~~ak~~G~~v~~~l~~~fg~~~~---~r~~~~~l~~~a~~l~~-~Gad~--I~L~DT~G~-~~P~~v~~lv~~l~~ 288 (398)
.+.++.|++.|..... . ..|.- .+.+.+.+.+..+.+.+ .+... ..++- .|. ++|+. +..|.+
T Consensus 93 i~la~~A~~~Gadavl--v---~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~-tg~~l~~~~----~~~La~ 162 (309)
T 3fkr_A 93 AARSLRAQQLGAAMVM--A---MPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPA-SGTALSAPF----LARMAR 162 (309)
T ss_dssp HHHHHHHHHTTCSEEE--E---CCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGG-GCCCCCHHH----HHHHHH
T ss_pred HHHHHHHHHcCCCEEE--E---cCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC-CCCCCCHHH----HHHHHh
Confidence 4556777888876431 1 13543 34567777776666655 34443 34554 354 44433 444444
Q ss_pred hCCCCeEEEE
Q 015894 289 AVPVDKLAVH 298 (398)
Q Consensus 289 ~~p~~~l~~H 298 (398)
++|++ +++-
T Consensus 163 ~~pnI-vgiK 171 (309)
T 3fkr_A 163 EIEQV-AYFX 171 (309)
T ss_dssp HSTTE-EEEE
T ss_pred hCCCE-EEEE
Confidence 56764 6766
No 364
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=83.72 E-value=3.1 Score=40.01 Aligned_cols=66 Identities=8% Similarity=0.038 Sum_probs=43.2
Q ss_pred HHHHHHHhCCCCEEEEccCcC-cCCHHHHHH--------HHHHHHhhCCCCeEEEEeCCccchHHHHHHHHH-HhCCCEE
Q 015894 252 YVSKQLYDMGCSEISLGDTIG-VGTPGTVIP--------MLEAVLDAVPVDKLAVHFHDTYGQALSNILASL-QMGISTV 321 (398)
Q Consensus 252 ~~a~~l~~~Gad~I~L~DT~G-~~~P~~v~~--------lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl-~aGa~~V 321 (398)
++++...++|++.|.+.|+.| .++|....+ +++.+++. |+.++-.|+..+ + +.+..+ +.|++.+
T Consensus 183 ~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g~~~i~~~~g~-~----~~l~~l~~~g~d~~ 256 (338)
T 2eja_A 183 AYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SDTPVIYFFRGS-S----SFIDLAVDYRADAL 256 (338)
T ss_dssp HHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CCCCEEEEESSH-H----HHHHHHTTSCCSEE
T ss_pred HHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CCCCEEEEcCCc-H----HHHHHHHHcCCCEE
Confidence 345555678999999999765 468876544 45666655 567788888655 2 233333 5788877
Q ss_pred ee
Q 015894 322 DS 323 (398)
Q Consensus 322 D~ 323 (398)
+.
T Consensus 257 ~~ 258 (338)
T 2eja_A 257 SV 258 (338)
T ss_dssp EC
T ss_pred Ee
Confidence 43
No 365
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=83.61 E-value=14 Score=41.11 Aligned_cols=79 Identities=16% Similarity=0.150 Sum_probs=59.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEc----cC-----cCc---CCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHH
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLG----DT-----IGV---GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILA 312 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~----DT-----~G~---~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANala 312 (398)
.+++.+.+.++.+.+.|+|.|.|- -+ .|. -.|..+.++++.+++... +||.+-.--+..-...-+.+
T Consensus 645 ~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~-~Pv~vK~~~~~~~~~~~a~~ 723 (1025)
T 1gte_A 645 YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQ-IPFFAKLTPNVTDIVSIARA 723 (1025)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCS-SCEEEEECSCSSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhC-CceEEEeCCChHHHHHHHHH
Confidence 368899999999999999988772 11 222 368889999999998864 46777665555445666788
Q ss_pred HHHhCCCEEeec
Q 015894 313 SLQMGISTVDSS 324 (398)
Q Consensus 313 Al~aGa~~VD~S 324 (398)
+.++|++.|.++
T Consensus 724 ~~~~G~d~i~v~ 735 (1025)
T 1gte_A 724 AKEGGADGVTAT 735 (1025)
T ss_dssp HHHHTCSEEEEC
T ss_pred HHHcCCCEEEEe
Confidence 889999999883
No 366
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=83.58 E-value=5.5 Score=36.54 Aligned_cols=164 Identities=14% Similarity=0.094 Sum_probs=80.0
Q ss_pred HHHHHHHhcC--CCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE---Ee--CC-H-hhHHHHHHcCCCEEEEec
Q 015894 123 ELIKLLVSSG--LAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV---LT--PN-L-KGFEAAVAAGAKEVAIFA 193 (398)
Q Consensus 123 ~ia~~L~~aG--v~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~---l~--~n-~-~~ie~a~~~Gv~~v~i~~ 193 (398)
+..+.++++| ++.+++|...--.+.| ++++.+++.++..+.. +. +| . .-++.+.+.|+|.|.+..
T Consensus 26 ~a~~~v~~~~~~v~~~Kvg~~lf~~~G~------~~v~~l~~~~g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~ 99 (228)
T 3m47_A 26 DALRVTGEVREYIDTVKIGYPLVLSEGM------DIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHG 99 (228)
T ss_dssp HHHHHHHTTTTTCSEEEEEHHHHHHHCT------HHHHHHHHHHCCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEES
T ss_pred HHHHHHHHcCCcccEEEEcHHHHHhcCH------HHHHHHHhcCCCeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEec
Confidence 3444445555 8899998421000111 2344555423332221 11 22 1 246777889999988865
Q ss_pred cCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCc
Q 015894 194 SASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGV 273 (398)
Q Consensus 194 ~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~ 273 (398)
.... +.+..+++.+++.|..|. +....+++.....-.+.+..+++...+.|.+.+.. |.
T Consensus 100 ~~G~---------------~~l~~~~~~~~~~g~~v~--vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~----~a 158 (228)
T 3m47_A 100 FPGA---------------DSVRACLNVAEEMGREVF--LLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVG----PS 158 (228)
T ss_dssp TTCH---------------HHHHHHHHHHHHHTCEEE--EECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEEC----CS
T ss_pred cCCH---------------HHHHHHHHHHHhcCCCeE--EEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEE----CC
Confidence 4322 234455667777776543 22222223211111245566788888899887542 22
Q ss_pred CCHHHHHHHHHHHHhhCCC-CeEEEEeCCccchHH--HHHHHHHHhCCCEEee
Q 015894 274 GTPGTVIPMLEAVLDAVPV-DKLAVHFHDTYGQAL--SNILASLQMGISTVDS 323 (398)
Q Consensus 274 ~~P~~v~~lv~~l~~~~p~-~~l~~H~Hnd~GlA~--ANalaAl~aGa~~VD~ 323 (398)
-.|.++.. +|+..|. ..+- +.|-+. ++. .++++|++++=+
T Consensus 159 t~~~e~~~----ir~~~~~~~~iv-----~PGI~~~g~~p-~~~~aGad~iVv 201 (228)
T 3m47_A 159 TRPERLSR----LREIIGQDSFLI-----SPGVGAQGGDP-GETLRFADAIIV 201 (228)
T ss_dssp SCHHHHHH----HHHHHCSSSEEE-----ECC----------CGGGTCSEEEE
T ss_pred CChHHHHH----HHHhcCCCCEEE-----ecCcCcCCCCH-hHHHcCCCEEEE
Confidence 35666554 4444432 1110 111111 245 888999986543
No 367
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=83.55 E-value=19 Score=32.26 Aligned_cols=196 Identities=13% Similarity=0.090 Sum_probs=101.7
Q ss_pred HHHHHHHHhcCCCEEEEe-cCCCCCcccCCCCHHHHHHHHHhccCCcEEEEe-------CCH-----------hhHHHHH
Q 015894 122 VELIKLLVSSGLAVVEAT-SFVSPKWVPQLADAKDVMAAIQNVEGARFPVLT-------PNL-----------KGFEAAV 182 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG-~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~-------~n~-----------~~ie~a~ 182 (398)
.+.++.+.++|++.||+. ......+ +.-.+.+++.+.+++ .+.++.++. .+. +.++.|.
T Consensus 17 ~~~l~~~~~~G~~~vEl~~~~~~~~~-~~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~ 94 (278)
T 1i60_A 17 KLDLELCEKHGYDYIEIRTMDKLPEY-LKDHSLDDLAEYFQT-HHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCK 94 (278)
T ss_dssp HHHHHHHHHTTCSEEEEETTTHHHHH-TTSSCHHHHHHHHHT-SSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEccHHHHHHH-hccCCHHHHHHHHHH-cCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 345666778999999998 4321101 011345566555553 245544332 111 1245667
Q ss_pred HcCCCEEEEeccCchHHHhhhcCCCH----HHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHH
Q 015894 183 AAGAKEVAIFASASESFSKSNINCTI----EDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLY 258 (398)
Q Consensus 183 ~~Gv~~v~i~~~~Sd~~~~~~~~~s~----~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~ 258 (398)
+.|++.|.+.....+ -+.+. +...+.+.++.++|++.|+.+. +...-+.. ..-.+++.+.++++.+
T Consensus 95 ~lG~~~v~~~~g~~~------~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--lEn~~~~~-~~~~~~~~~~~l~~~~- 164 (278)
T 1i60_A 95 TLGVKYVVAVPLVTE------QKIVKEEIKKSSVDVLTELSDIAEPYGVKIA--LEFVGHPQ-CTVNTFEQAYEIVNTV- 164 (278)
T ss_dssp HHTCCEEEEECCBCS------SCCCHHHHHHHHHHHHHHHHHHHGGGTCEEE--EECCCCTT-BSSCSHHHHHHHHHHH-
T ss_pred HcCCCEEEEecCCCC------CCCCHHHHHHHHHHHHHHHHHHHHhcCCEEE--EEecCCcc-chhcCHHHHHHHHHHh-
Confidence 789999988543211 02233 3455666777788888898764 32211000 0224667777766544
Q ss_pred hCCCCEE-EEccCcCc----CCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCC
Q 015894 259 DMGCSEI-SLGDTIGV----GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPY 333 (398)
Q Consensus 259 ~~Gad~I-~L~DT~G~----~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~ 333 (398)
+.+.+ ..-|+.=. ..|. + +.+.+.+--.++|+||..+.. .|-. .+ --.+
T Consensus 165 --~~~~~g~~~D~~h~~~~g~d~~---~----~~~~~~~~i~~vHl~D~~~~~---------~g~~-~~-----~~~~-- 218 (278)
T 1i60_A 165 --NRDNVGLVLDSFHFHAMGSNIE---S----LKQADGKKIFIYHIDDTEDFP---------IGFL-TD-----EDRV-- 218 (278)
T ss_dssp --CCTTEEEEEEHHHHHHTTCCHH---H----HHTSCGGGEEEEEECEECCCC---------TTTC-CG-----GGEE--
T ss_pred --CCCCeeEEEEeEEEeecCCCHH---H----HHhcCcceEEEEEecCCCCCC---------ccch-hh-----ccCC--
Confidence 33322 22354211 1222 2 223333334789999976531 0100 00 0001
Q ss_pred CCCCCCCccHHHHHHHHHhCCCC
Q 015894 334 AKGASGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 334 a~graGNa~lE~vv~~L~~~Gi~ 356 (398)
.+ +.|..+.+.++..|++.|++
T Consensus 219 ~~-G~G~id~~~~~~~L~~~gy~ 240 (278)
T 1i60_A 219 WP-GQGAIDLDAHLSALKEIGFS 240 (278)
T ss_dssp ST-TSSSSCHHHHHHHHHHTTCC
T ss_pred CC-CCCCCcHHHHHHHHHHcCCC
Confidence 12 25789999999999987764
No 368
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=83.46 E-value=13 Score=35.78 Aligned_cols=118 Identities=14% Similarity=0.080 Sum_probs=68.6
Q ss_pred hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeee--ecCCCC------CCCC-
Q 015894 176 KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCV--VGCPVE------GMVP- 246 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~--fg~~~~------~r~~- 246 (398)
+.++...++|+..||+-+-+.+. -+. ..++.+.++++.||++|++|-..+=+. +..|-. -..+
T Consensus 31 d~~~ilk~~G~N~VRi~~w~~P~-----~g~---~~~~~~~~~~~~A~~~GlkV~ld~Hysd~WadPg~Q~~p~~W~~~~ 102 (332)
T 1hjs_A 31 PLENILAANGVNTVRQRVWVNPA-----DGN---YNLDYNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQTMPAGWPSDI 102 (332)
T ss_dssp CHHHHHHHTTCCEEEEEECSSCT-----TCT---TSHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTCCCSH
T ss_pred cHHHHHHHCCCCEEEEeeeeCCC-----CCc---CCHHHHHHHHHHHHHCCCEEEEEeccCCCcCCccccCCccccccch
Confidence 45677788999999986544432 011 124667788999999999987544211 111210 0111
Q ss_pred -------HHHHHHHHHHHHhCC--CCEEEEcc--CcCcC-------CHHHHHHH----HHHHHhhC--CCCeEEEEeCC
Q 015894 247 -------PSKVAYVSKQLYDMG--CSEISLGD--TIGVG-------TPGTVIPM----LEAVLDAV--PVDKLAVHFHD 301 (398)
Q Consensus 247 -------~~~l~~~a~~l~~~G--ad~I~L~D--T~G~~-------~P~~v~~l----v~~l~~~~--p~~~l~~H~Hn 301 (398)
.++..++++++.+.| ++.+.+.- +.|.+ ....+.++ ++++|+.. |...+.+|..+
T Consensus 103 ~~~~~~~~~yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~l~~~~~~avR~~~~~p~~~v~ih~~~ 181 (332)
T 1hjs_A 103 DNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDN 181 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHHHHHHHHHHHHHHhccCCCCeEEEEeCC
Confidence 234445667777766 45665543 11222 23444444 45577777 87788888876
No 369
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=83.40 E-value=4.1 Score=39.06 Aligned_cols=83 Identities=12% Similarity=0.095 Sum_probs=67.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCC-CCeEEEE-eCCccchHHHHHHHHHHh
Q 015894 242 EGMVPPSKVAYVSKQLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVP-VDKLAVH-FHDTYGQALSNILASLQM 316 (398)
Q Consensus 242 ~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~l~~H-~Hnd~GlA~ANalaAl~a 316 (398)
.+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .++|-++ ++|+..-++..+..|-++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~ 106 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKL 106 (306)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhc
Confidence 3568899999999999999999999999988 5677888888888887653 3555554 567888899999999999
Q ss_pred CCCEEeec
Q 015894 317 GISTVDSS 324 (398)
Q Consensus 317 Ga~~VD~S 324 (398)
||+.+=+.
T Consensus 107 Gadavlv~ 114 (306)
T 1o5k_A 107 GANGVLVV 114 (306)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEC
Confidence 99977554
No 370
>3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A*
Probab=83.38 E-value=2.5 Score=43.49 Aligned_cols=84 Identities=12% Similarity=0.056 Sum_probs=62.5
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC--------CCCCC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV--------EGMVP 246 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~--------~~r~~ 246 (398)
.+||+...+.|++..|+.++=|-++.+-..+.-.++.|+.+.++|+.+++.|++..++|.. |..|. ..|-.
T Consensus 69 ~EDi~Lm~elG~~~yRfSIsWsRI~P~G~~g~~N~~Gl~fY~~lId~Ll~~GIeP~VTL~H-~DlP~~L~~~GGW~nr~~ 147 (487)
T 3vii_A 69 KEDVKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYH-WDLPQALQDLGGWPNLVL 147 (487)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHSTTSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHTTTSTTSTHH
T ss_pred HHHHHHHHHcCCCEEEeeCCHHHcCcCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEEec-CCCcHHHHHcCCCCCHHH
Confidence 4799999999999999998877666542134446789999999999999999999988886 44442 22334
Q ss_pred HHHHHHHHHHHHh
Q 015894 247 PSKVAYVSKQLYD 259 (398)
Q Consensus 247 ~~~l~~~a~~l~~ 259 (398)
++.+.++|+.+.+
T Consensus 148 v~~F~~YA~~~f~ 160 (487)
T 3vii_A 148 AKYSENYARVLFK 160 (487)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4566666665543
No 371
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=83.36 E-value=16 Score=34.70 Aligned_cols=119 Identities=13% Similarity=0.105 Sum_probs=72.5
Q ss_pred CCcEEEEe-CCHhhHHHHHHcCCCEEEEeccCchHH--HhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC
Q 015894 165 GARFPVLT-PNLKGFEAAVAAGAKEVAIFASASESF--SKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV 241 (398)
Q Consensus 165 ~~~l~~l~-~n~~~ie~a~~~Gv~~v~i~~~~Sd~~--~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~ 241 (398)
+-++.+++ .+..-.+.+-++|+|.+-+-.++.-.. .......|.++.+...+.+.+.++ ...|.+ ..|.
T Consensus 28 g~~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~--~~~vva------D~pf 99 (275)
T 3vav_A 28 GEKIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQP--RALIVA------DLPF 99 (275)
T ss_dssp TCCEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCC--SSEEEE------ECCT
T ss_pred CCcEEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCC--CCCEEE------ecCC
Confidence 45666665 355556667789999996554443211 011124577888877765555321 123332 2344
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEe
Q 015894 242 EGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHF 299 (398)
Q Consensus 242 ~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~ 299 (398)
.+-.+++...+-+.++.+.|++.|.|-|.. ...+.|+++.+. ++|+--|.
T Consensus 100 gsY~s~~~a~~~a~rl~kaGa~aVklEdg~------~~~~~i~~l~~~--GIpv~gHl 149 (275)
T 3vav_A 100 GTYGTPADAFASAVKLMRAGAQMVKFEGGE------WLAETVRFLVER--AVPVCAHV 149 (275)
T ss_dssp TSCSSHHHHHHHHHHHHHTTCSEEEEECCG------GGHHHHHHHHHT--TCCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECCch------hHHHHHHHHHHC--CCCEEEec
Confidence 322688888888888888899999999973 456677777764 23444454
No 372
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=83.34 E-value=4.8 Score=39.56 Aligned_cols=209 Identities=12% Similarity=0.079 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCEEEEe----cCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeCCH----------------------
Q 015894 122 VELIKLLVSSGLAVVEAT----SFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNL---------------------- 175 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG----~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~n~---------------------- 175 (398)
.+.++.+.++|++.||+. ++........-.+.+++.+.+++ .++++.++..+.
T Consensus 36 ~e~l~~aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~-~GL~i~~~~~~~f~~p~~~~g~l~spd~~~r~~~ 114 (393)
T 1xim_A 36 VEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDE-TGLIVPMVTTNLFTHPVFKDGGFTSNDRSVRRYA 114 (393)
T ss_dssp HHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHH-HTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHH-hCCEEEEEecCCcCCcccccCCCCCCCHHHHHHH
Q ss_pred -----hhHHHHHHcCCCEEEEeccC--chHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCC--CCCCCC
Q 015894 176 -----KGFEAAVAAGAKEVAIFASA--SESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCP--VEGMVP 246 (398)
Q Consensus 176 -----~~ie~a~~~Gv~~v~i~~~~--Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~--~~~r~~ 246 (398)
+.++.|.+.|++.|.+.... .+..........++...+.+.++.++|++.|+.|+..+...-..| ...-.+
T Consensus 115 i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv~l~lE~~~~~~~~~~~~~t 194 (393)
T 1xim_A 115 IRKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAALDRYREALNLLAQYSEDRGYGLRFAIEPKPNEPRGDILLPT 194 (393)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECTTSEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCSSSSSSEESSCS
T ss_pred HHHHHHHHHHHHHhCCCEEEECCCCCCCcCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEecCCCCCCCCCcCCC
Q ss_pred HHHHHHHHHHHHhCCCCE--EEEccCcCc-CCHHHHHHHHHHHH--hhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEE
Q 015894 247 PSKVAYVSKQLYDMGCSE--ISLGDTIGV-GTPGTVIPMLEAVL--DAVPVDKLAVHFHDTYGQALSNILASLQMGISTV 321 (398)
Q Consensus 247 ~~~l~~~a~~l~~~Gad~--I~L~DT~G~-~~P~~v~~lv~~l~--~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~V 321 (398)
.+...++++ +.|.+. -..-|+.=. ..-..+.+.++.+. ..+ .++|++|..|
T Consensus 195 ~~~~~~ll~---~v~~~~~vgl~lD~gH~~~~g~d~~~~l~~~~~~~~i----~~vHl~D~~~----------------- 250 (393)
T 1xim_A 195 AGHAIAFVQ---ELERPELFGINPETGHEQMSNLNFTQGIAQALWHKKL----FHIDLNGQHG----------------- 250 (393)
T ss_dssp HHHHHHHHT---TSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHHTCB----CCCEECBCCS-----------------
T ss_pred HHHHHHHHH---HhCCccceEEEEccCCccccCCCHHHHHHHhhhcCCE----EEEEeCCCCC-----------------
Q ss_pred eec-cccCCCCCCCCCCCCCcc-HHHHHHHHHhC-----CCCCccChH
Q 015894 322 DSS-VSGLGGCPYAKGASGNVA-TEDVVYMLNGL-----GVRTNVDIR 362 (398)
Q Consensus 322 D~S-v~GlGecp~a~graGNa~-lE~vv~~L~~~-----Gi~t~iDl~ 362 (398)
.. -.+++. +.++.. +..++..|++. |++-.+-++
T Consensus 251 -~~~d~~l~~------G~~d~~~i~~~~~~L~~~~~~~~Gy~G~i~lE 291 (393)
T 1xim_A 251 -PKFDQDLVF------GHGDLLNAFSLVDLLENGPDGAPAYDGPRHFD 291 (393)
T ss_dssp -SSSCCCBCT------TSSSHHHHHHHHHHHHSCGGGSCSCCSCEEEC
T ss_pred -ccccCCCCC------CCcCHHHHHHHHHHHHhccccccCCCCCeEEE
No 373
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=83.31 E-value=13 Score=35.70 Aligned_cols=62 Identities=6% Similarity=0.024 Sum_probs=37.4
Q ss_pred HHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHh-CCCCEEEEccCcCcCCHHHHHHHH
Q 015894 216 RDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYD-MGCSEISLGDTIGVGTPGTVIPML 283 (398)
Q Consensus 216 ~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~-~Gad~I~L~DT~G~~~P~~v~~lv 283 (398)
.+.++.|++.|..... ...|.-.+.+.+.+.+..+.+.+ .+...+..- ..|.++|+.+.++.
T Consensus 96 i~la~~A~~~Gadavl-----v~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn-~tg~l~~~~~~~La 158 (314)
T 3d0c_A 96 IELGKSAIDSGADCVM-----IHQPVHPYITDAGAVEYYRNIIEALDAPSIIYF-KDAHLSDDVIKELA 158 (314)
T ss_dssp HHHHHHHHHTTCSEEE-----ECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEE-CCTTSCTHHHHHHT
T ss_pred HHHHHHHHHcCCCEEE-----ECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe-CCCCcCHHHHHHHH
Confidence 3556778888887531 11455455677777777666655 355544333 77776666666653
No 374
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=83.31 E-value=16 Score=34.42 Aligned_cols=79 Identities=14% Similarity=0.095 Sum_probs=54.6
Q ss_pred CCHHHHHHHHHHHHhCCCC-EEEEc----cCcC---c-CCHHHHHHHHHHHHhhCCCCeEEEEeCCccc--hHHHHHHHH
Q 015894 245 VPPSKVAYVSKQLYDMGCS-EISLG----DTIG---V-GTPGTVIPMLEAVLDAVPVDKLAVHFHDTYG--QALSNILAS 313 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad-~I~L~----DT~G---~-~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~G--lA~ANalaA 313 (398)
.+++.+.+.++.+.++|+| .|.|- -+-| + ..|+.+.++++++++... .||.+-.--+.. -...-+..+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~-~Pv~vKi~~~~~~~~~~~~a~~~ 181 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFT-KPLGVKLPPYFDLVHFDIMAEIL 181 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCC-SCEEEEECCCCSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcC-CCEEEEECCCCCHHHHHHHHHHH
Confidence 3688999999999999999 77661 1111 2 378899999999998763 467665543332 122225566
Q ss_pred HHhCCCEEeec
Q 015894 314 LQMGISTVDSS 324 (398)
Q Consensus 314 l~aGa~~VD~S 324 (398)
.++|++.|.++
T Consensus 182 ~~~G~d~i~v~ 192 (311)
T 1jub_A 182 NQFPLTYVNSV 192 (311)
T ss_dssp TTSCCCEEEEC
T ss_pred HHcCCcEEEec
Confidence 78899988765
No 375
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=83.29 E-value=8 Score=37.11 Aligned_cols=121 Identities=14% Similarity=0.135 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcCcCCH------HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHH-HhC
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTIGVGTP------GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASL-QMG 317 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P------~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl-~aG 317 (398)
.+++.+.+.++.+.+.|+..|.| +.|. .| ..+.++++.+++.++ +.+ |+ +.|+-..-.+..+ ++|
T Consensus 91 ls~eei~~~~~~~~~~G~~~i~l--~gGe-~p~~~~~~~~~~~l~~~ik~~~~-i~i--~~--s~g~~~~e~l~~L~~aG 162 (350)
T 3t7v_A 91 LTMEEIKETCKTLKGAGFHMVDL--TMGE-DPYYYEDPNRFVELVQIVKEELG-LPI--MI--SPGLMDNATLLKAREKG 162 (350)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEEE--EECC-CHHHHHSTHHHHHHHHHHHHHHC-SCE--EE--ECSSCCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEE--eeCC-CCccccCHHHHHHHHHHHHhhcC-ceE--EE--eCCCCCHHHHHHHHHcC
Confidence 58899999999999999999999 3343 34 556889999987764 333 43 3455445555555 589
Q ss_pred CCEEeeccccCCCCCCCCCCCCCccHHHHHHHHH---hCCCCC------c--cChHHHHHHHHHHHHH
Q 015894 318 ISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLN---GLGVRT------N--VDIRKLMIAGDFICKH 374 (398)
Q Consensus 318 a~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~---~~Gi~t------~--iDl~~L~~~~~~v~~~ 374 (398)
++.+..++-..-.=-|..-+. .-+.++.+..++ +.|+.+ | -+.+.+.+..+.+.+.
T Consensus 163 ~~~i~i~lEt~~~~~~~~i~~-~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e~~~~~l~~l~~l 229 (350)
T 3t7v_A 163 ANFLALYQETYDTELYRKLRV-GQSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTILSLRGMSTN 229 (350)
T ss_dssp EEEEECCCBCSCHHHHHHHST-TCCHHHHHHHHHHHHHHTCEEEEEEEESSSCCHHHHHHHHHHHHHT
T ss_pred CCEEEEeeecCCHHHHHHhCC-CCCHHHHHHHHHHHHHcCCeEccceEeecCCCHHHHHHHHHHHHhC
Confidence 998886665542100000001 134566555554 456542 2 2335566666665553
No 376
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=83.28 E-value=14 Score=35.94 Aligned_cols=122 Identities=14% Similarity=0.143 Sum_probs=77.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-----------CCC------C----CCCH-------HHHHHHHHH
Q 015894 205 NCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGC-----------PVE------G----MVPP-------SKVAYVSKQ 256 (398)
Q Consensus 205 ~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~-----------~~~------~----r~~~-------~~l~~~a~~ 256 (398)
+...++.++..+++++.+++.|-.+...|... |- |-. . ..+. +.+.+.++.
T Consensus 73 gi~~d~~i~~~~~~~~~vh~~G~~i~~QL~H~-Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~ 151 (343)
T 3kru_A 73 GIWNDEQVKELKKIVDICKANGAVMGIQLAHA-GRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKR 151 (343)
T ss_dssp BCSSHHHHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHhcCCceEeeehhhc-cCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhh
Confidence 34445678888999999999999887777653 10 000 0 1222 344556677
Q ss_pred HHhCCCCEEEEc-------------------cCcCcCC---HHHHHHHHHHHHhhCC-CCeEEEEeCCc----cchHHHH
Q 015894 257 LYDMGCSEISLG-------------------DTIGVGT---PGTVIPMLEAVLDAVP-VDKLAVHFHDT----YGQALSN 309 (398)
Q Consensus 257 l~~~Gad~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p-~~~l~~H~Hnd----~GlA~AN 309 (398)
+.++|.|.|-|- |-.|... +.-+.++|+++|+.++ +.+|++-..-+ -|..+..
T Consensus 152 a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~ 231 (343)
T 3kru_A 152 ANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDM 231 (343)
T ss_dssp HHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHH
T ss_pred ccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHH
Confidence 778999988775 5566432 3556889999999985 55788765532 1222222
Q ss_pred ----HHHHHHhCCCEEeeccccC
Q 015894 310 ----ILASLQMGISTVDSSVSGL 328 (398)
Q Consensus 310 ----alaAl~aGa~~VD~Sv~Gl 328 (398)
+...-++ ++.|+++..+.
T Consensus 232 ~~~~a~~l~~~-vd~i~vs~g~~ 253 (343)
T 3kru_A 232 MVEYINMIKDK-VDLIDVSSGGL 253 (343)
T ss_dssp HHHHHHHHTTT-CSEEEEECCCS
T ss_pred HHHHHHHhhcc-ccEEeccCCce
Confidence 2222346 99999986544
No 377
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=83.25 E-value=25 Score=31.52 Aligned_cols=110 Identities=15% Similarity=0.094 Sum_probs=67.4
Q ss_pred hhHHHHHHcCCCEEEEeccCch--HHHhh--hcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHH
Q 015894 176 KGFEAAVAAGAKEVAIFASASE--SFSKS--NINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVA 251 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~Sd--~~~~~--~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~ 251 (398)
+-++.+.++|.+.|-++..-.. .|... ....+. +.+.++.+.+++.|+.+.. +...+ . ...+.+.
T Consensus 26 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gl~i~~-~~~~~---~---~~~~~~~ 94 (262)
T 3p6l_A 26 EALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDA----QTQKEIKELAASKGIKIVG-TGVYV---A---EKSSDWE 94 (262)
T ss_dssp HHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCH----HHHHHHHHHHHHTTCEEEE-EEEEC---C---SSTTHHH
T ss_pred HHHHHHHHcCCCEEeecCCcccccccccccccccCCH----HHHHHHHHHHHHcCCeEEE-EeccC---C---ccHHHHH
Confidence 3477889999999998753110 00000 011222 2344566778899998753 22111 1 2456788
Q ss_pred HHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCcc
Q 015894 252 YVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTY 303 (398)
Q Consensus 252 ~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~ 303 (398)
+.++.+.++|++.|.+.- | +.....+.....+ . ++.|.+|.|...
T Consensus 95 ~~i~~A~~lGa~~v~~~~--~---~~~~~~l~~~a~~-~-gv~l~~En~~~~ 139 (262)
T 3p6l_A 95 KMFKFAKAMDLEFITCEP--A---LSDWDLVEKLSKQ-Y-NIKISVHNHPQP 139 (262)
T ss_dssp HHHHHHHHTTCSEEEECC--C---GGGHHHHHHHHHH-H-TCEEEEECCSSS
T ss_pred HHHHHHHHcCCCEEEecC--C---HHHHHHHHHHHHH-h-CCEEEEEeCCCc
Confidence 889999999999998862 2 3555555555443 3 367999999763
No 378
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=83.19 E-value=15 Score=37.20 Aligned_cols=143 Identities=13% Similarity=0.145 Sum_probs=88.3
Q ss_pred CCHHHHHHHHHhc---cCCcEEEEeCCHhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC
Q 015894 151 ADAKDVMAAIQNV---EGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSI 227 (398)
Q Consensus 151 ~D~~~v~~~i~~~---~~~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~ 227 (398)
.|++.+...++.+ .++.++..+.+.+-++++++.+.+...+..++++ +++.++...|+++|.
T Consensus 138 ~dpe~~~~vVk~V~e~~dvPL~IDS~dpevleaALea~a~~~plI~sat~---------------dn~e~m~~lAa~y~~ 202 (446)
T 4djd_C 138 DDPAAFKAAVASVAAATQLNLVLMADDPDVLKEALAGVADRKPLLYAATG---------------ANYEAMTALAKENNC 202 (446)
T ss_dssp SSTHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHGGGGGGCCEEEEECT---------------TTHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEecCCHHHHHHHHHhhcCcCCeeEecch---------------hhHHHHHHHHHHcCC
Confidence 3556666666643 3566666677888899999988776555555442 345667788899999
Q ss_pred cEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCc-CcCCHHHHHHHHHHH--Hhh-----CCCCeEEEEe
Q 015894 228 PVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTI-GVGTPGTVIPMLEAV--LDA-----VPVDKLAVHF 299 (398)
Q Consensus 228 ~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~-G~~~P~~v~~lv~~l--~~~-----~p~~~l~~H~ 299 (398)
.+.+ + .+ +.+.+.++.+.+.++|++.|.|==.. |...-.+....++.+ ++. +|. |.+-.
T Consensus 203 pVi~--~----~~-----dl~~lkelv~~a~~~GI~~IvLDPG~~g~~~t~~~~~~iRr~AL~~~d~~LgyPv--i~~~s 269 (446)
T 4djd_C 203 PLAV--Y----GN-----GLEELAELVDKIVALGHKQLVLDPGARETSRAIADFTQIRRLAIKKRFRSFGYPI--IALTT 269 (446)
T ss_dssp CEEE--E----CS-----SHHHHHHHHHHHHHTTCCCEEEECCCCSHHHHHHHHHHHHHHHHHSCCGGGCSCB--EEECC
T ss_pred cEEE--E----ec-----cHHHHHHHHHHHHHCCCCcEEECCCchhHHHHHHHHHHHHHHhhhccCcccCCCE--EeccC
Confidence 8752 2 11 67899999999999999877553333 432222222222322 111 342 55556
Q ss_pred CCccchHHHHHHHHHHhCCCEE
Q 015894 300 HDTYGQALSNILASLQMGISTV 321 (398)
Q Consensus 300 Hnd~GlA~ANalaAl~aGa~~V 321 (398)
..|.-+-...+...+..|+++|
T Consensus 270 r~d~~~E~t~A~~~i~kga~Iv 291 (446)
T 4djd_C 270 AANPLDEVLQAVNYVTKYASLV 291 (446)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEE
T ss_pred CccHHHHHHHHHHHHHcCCeEE
Confidence 6564444444456677888765
No 379
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=83.05 E-value=2.2 Score=37.82 Aligned_cols=68 Identities=7% Similarity=0.035 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCC-CCeEEEEeCCccchHHHHHHHHHHhCCCEE
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVP-VDKLAVHFHDTYGQALSNILASLQMGISTV 321 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p-~~~l~~H~Hnd~GlA~ANalaAl~aGa~~V 321 (398)
.+++...++++.+.+.|++.|.+.=. +| ...+.++.+|+.+| +..|++....|. ..+..|+++||++|
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~----~~-~~~~~i~~ir~~~~~~~~ig~~~v~~~----~~~~~a~~~Gad~i 87 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFT----VP-DADTVIKELSFLKEKGAIIGAGTVTSV----EQCRKAVESGAEFI 87 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETT----ST-THHHHHHHTHHHHHTTCEEEEESCCSH----HHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC----Ch-hHHHHHHHHHHHCCCCcEEEecccCCH----HHHHHHHHcCCCEE
Confidence 46889999999999999999976422 34 33556888888876 667888653333 34688889999999
No 380
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=82.92 E-value=15 Score=36.51 Aligned_cols=120 Identities=13% Similarity=0.153 Sum_probs=77.6
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC---------------CCC-----------------CCCCH-------
Q 015894 207 TIEDSLIRYRDVALAARELSIPVRGYLSCVVGC---------------PVE-----------------GMVPP------- 247 (398)
Q Consensus 207 s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~---------------~~~-----------------~r~~~------- 247 (398)
..++.++..+.+++.+++.|-.+.+.|... |- |-. ....|
T Consensus 87 ~~d~~i~~~k~l~~avh~~G~~i~~QL~H~-Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~e 165 (402)
T 2hsa_B 87 FTKEQVREWKKIVDVVHAKGAVIFCQLWHV-GRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYE 165 (402)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCEEEEEEECC-TTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGG
T ss_pred CCHHHHHHHHHHHHHHHhcCCeEEEEeccC-CcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHH
Confidence 345667778888889999998887777641 10 000 00123
Q ss_pred -----HHHHHHHHHHHhCCCCEEEE-------------------ccCcCcCC---HHHHHHHHHHHHhhCCCCeEEEEeC
Q 015894 248 -----SKVAYVSKQLYDMGCSEISL-------------------GDTIGVGT---PGTVIPMLEAVLDAVPVDKLAVHFH 300 (398)
Q Consensus 248 -----~~l~~~a~~l~~~Gad~I~L-------------------~DT~G~~~---P~~v~~lv~~l~~~~p~~~l~~H~H 300 (398)
+.+.+.|+.+.++|.|.|-| .|-.|... +.-+.++|+++|+.++..+|.+-..
T Consensus 166 I~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls 245 (402)
T 2hsa_B 166 ISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVS 245 (402)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence 56777888889999998776 23344332 4558899999999886337888755
Q ss_pred Cc-------cch----HHHHHHHHHHhC------CCEEeecccc
Q 015894 301 DT-------YGQ----ALSNILASLQMG------ISTVDSSVSG 327 (398)
Q Consensus 301 nd-------~Gl----A~ANalaAl~aG------a~~VD~Sv~G 327 (398)
-+ .|. ++.-+.+.-++| ++.|+++-..
T Consensus 246 ~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~ 289 (402)
T 2hsa_B 246 PAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPR 289 (402)
T ss_dssp SSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCC
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCc
Confidence 32 122 333334445688 9999997543
No 381
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=82.91 E-value=3.7 Score=39.13 Aligned_cols=82 Identities=15% Similarity=0.026 Sum_probs=67.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCC-CCeEEEE-eCCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVP-VDKLAVH-FHDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~l~~H-~Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+++-++ ++|+..-++..+..|-++|
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~G 95 (297)
T 2rfg_A 16 GQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAG 95 (297)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcC
Confidence 568899999999999999999999999988 5677888888888887653 3455553 5678888999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 96 adavlv~ 102 (297)
T 2rfg_A 96 ADAVLCV 102 (297)
T ss_dssp CSEEEEC
T ss_pred CCEEEEc
Confidence 9977654
No 382
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=82.69 E-value=15 Score=34.98 Aligned_cols=186 Identities=13% Similarity=0.152 Sum_probs=105.8
Q ss_pred HHHHHHHhcCCCEEEEecC-C------CCCcccCCCCHHHHHHHHHhcc-CCcEEEEe--C----CH----hhHHHHHHc
Q 015894 123 ELIKLLVSSGLAVVEATSF-V------SPKWVPQLADAKDVMAAIQNVE-GARFPVLT--P----NL----KGFEAAVAA 184 (398)
Q Consensus 123 ~ia~~L~~aGv~~IEvG~~-~------~~~~~p~~~D~~~v~~~i~~~~-~~~l~~l~--~----n~----~~ie~a~~~ 184 (398)
--++.++++|++.|=+|.. . .|+.. .-+.++++..++.+. .+.+.+++ + +. +-+++..++
T Consensus 32 ~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~--~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~~~~~v~~l~~a 109 (287)
T 3b8i_A 32 MSARIAADLGFECGILGGSVASLQVLAAPDFA--LITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERA 109 (287)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHHHHSCCSSS--CSCHHHHHHHHHHHHTTCSSCEEEECTTCSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHh
Confidence 3466778899999999854 2 13322 235677777776543 23333343 2 22 234566789
Q ss_pred CCCEEEEeccCchH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCC
Q 015894 185 GAKEVAIFASASES---FSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMG 261 (398)
Q Consensus 185 Gv~~v~i~~~~Sd~---~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~G 261 (398)
|+.-|.|-..+.+- |...+ =.+.++..++++.+++....-++.+.+-- ++.....+...+-++.+.++|
T Consensus 110 Ga~gv~iED~~~pKrcgh~~gk-l~~~~e~~~~I~aa~~a~~~~~~~i~aRt-------daa~~gl~~ai~Ra~ay~eAG 181 (287)
T 3b8i_A 110 GIAALTIEDTLLPAQFGRKSTD-LICVEEGVGKIRAALEARVDPALTIIART-------NAELIDVDAVIQRTLAYQEAG 181 (287)
T ss_dssp TCSEEEEECBCCSCCTTTCTTC-BCCHHHHHHHHHHHHHHCCSTTSEEEEEE-------ETTTSCHHHHHHHHHHHHHTT
T ss_pred CCeEEEEcCCCCccccCCCCCC-ccCHHHHHHHHHHHHHcCCCCCcEEEEec-------hhhhcCHHHHHHHHHHHHHcC
Confidence 99999998876421 11222 24667777776555554433344444211 111234577888888999999
Q ss_pred CCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccC
Q 015894 262 CSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGL 328 (398)
Q Consensus 262 ad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~Gl 328 (398)
||.|.+. |.-+++.+.++.+.+. .| +-+--....++ -+.-.--++|+++|-.....+
T Consensus 182 Ad~i~~e---~~~~~~~~~~i~~~~~--~P---~ii~~~g~~~~--~~~~eL~~lGv~~v~~~~~~~ 238 (287)
T 3b8i_A 182 ADGICLV---GVRDFAHLEAIAEHLH--IP---LMLVTYGNPQL--RDDARLARLGVRVVVNGHAAY 238 (287)
T ss_dssp CSEEEEE---CCCSHHHHHHHHTTCC--SC---EEEECTTCGGG--CCHHHHHHTTEEEEECCCHHH
T ss_pred CCEEEec---CCCCHHHHHHHHHhCC--CC---EEEeCCCCCCC--CCHHHHHHcCCcEEEEChHHH
Confidence 9999987 3444555555544432 34 33322222222 223344468988886665544
No 383
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=82.69 E-value=6.6 Score=37.46 Aligned_cols=127 Identities=13% Similarity=0.147 Sum_probs=85.7
Q ss_pred CCCHHHHHHHHHHHHhCCCCEE----EEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCC
Q 015894 244 MVPPSKVAYVSKQLYDMGCSEI----SLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGIS 319 (398)
Q Consensus 244 r~~~~~l~~~a~~l~~~Gad~I----~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~ 319 (398)
..+|+++++-+.+..++||..+ +=.|-.....|..+++++..+|+.-|++.|.+-+--..+....--++.++..-+
T Consensus 30 PvTpeEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~~~~Pe 109 (282)
T 2y7e_A 30 PITPEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPLALKPE 109 (282)
T ss_dssp CCSHHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGGGGCCS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHhhcCCC
Confidence 3688999999999999998764 325556778899999999999988888777776644433334444444444445
Q ss_pred EEeeccccCCCCCCCCC--CCCCccHHHHHHHHHhCCCCCc---cChHHHHHHHHHHHH
Q 015894 320 TVDSSVSGLGGCPYAKG--ASGNVATEDVVYMLNGLGVRTN---VDIRKLMIAGDFICK 373 (398)
Q Consensus 320 ~VD~Sv~GlGecp~a~g--raGNa~lE~vv~~L~~~Gi~t~---iDl~~L~~~~~~v~~ 373 (398)
+...++ |..=|... ......+++++..+++.|+.+. +|...|..+..++++
T Consensus 110 ~asl~~---gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~fd~g~l~~~~~l~~~ 165 (282)
T 2y7e_A 110 MATLNA---GTLNFGDDIFINHPADIIRLAEAFKQYNVVPEVEVYESGMVDAVARLIKK 165 (282)
T ss_dssp EEEEEC---CCEEETTEEECCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHT
T ss_pred EEEecc---cccccccccccCCHHHHHHHHHHHHHcCCeEEEEEECHHHHHHHHHHHHc
Confidence 543333 22111100 1223568899999999998754 788888888877765
No 384
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=82.64 E-value=3.6 Score=39.12 Aligned_cols=82 Identities=9% Similarity=0.016 Sum_probs=66.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEccCcC---cCCHHHHHHHHHHHHhhCC-CCeEEE-EeCCccchHHHHHHHHHHhC
Q 015894 243 GMVPPSKVAYVSKQLYDMGCSEISLGDTIG---VGTPGTVIPMLEAVLDAVP-VDKLAV-HFHDTYGQALSNILASLQMG 317 (398)
Q Consensus 243 ~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~l~~-H~Hnd~GlA~ANalaAl~aG 317 (398)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .+++-+ -++|+..-++..+..|-++|
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 95 (292)
T 2vc6_A 16 DRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAG 95 (292)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcC
Confidence 568899999999999999999999999988 5677888888888887653 345545 45678888999999999999
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
|+.+=+.
T Consensus 96 adavlv~ 102 (292)
T 2vc6_A 96 ADGVLIV 102 (292)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9977544
No 385
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=82.63 E-value=12 Score=35.57 Aligned_cols=78 Identities=5% Similarity=-0.137 Sum_probs=43.3
Q ss_pred HHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHh-CCCCE--EEEccCcCcCCHHHHHHHHHHHHhhCCC
Q 015894 216 RDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYD-MGCSE--ISLGDTIGVGTPGTVIPMLEAVLDAVPV 292 (398)
Q Consensus 216 ~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~-~Gad~--I~L~DT~G~~~P~~v~~lv~~l~~~~p~ 292 (398)
.+.++.|++.|.....-+ .|.-.+.+.+.+.+..+.+.+ .+... ..++...|.-.+.+ ++..|. ..|+
T Consensus 89 i~la~~a~~~Gadavlv~-----~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~---~~~~La-~~pn 159 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAI-----LEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLD---VIARLA-EHPR 159 (300)
T ss_dssp HHHHHHHHHHTCSEEEEE-----ECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHH---HHHHHH-TSTT
T ss_pred HHHHHHHHHcCCCEEEEc-----CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHH---HHHHHH-cCCC
Confidence 455677778888653212 354445677777777776655 35443 45566777644432 333332 4676
Q ss_pred CeEEE-EeCCcc
Q 015894 293 DKLAV-HFHDTY 303 (398)
Q Consensus 293 ~~l~~-H~Hnd~ 303 (398)
+ +++ ....|.
T Consensus 160 I-vgiKdssgd~ 170 (300)
T 3eb2_A 160 I-RYIKDASTNT 170 (300)
T ss_dssp E-EEEEECSSBH
T ss_pred E-EEEEcCCCCH
Confidence 4 666 444444
No 386
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=82.50 E-value=6.1 Score=36.60 Aligned_cols=70 Identities=14% Similarity=0.092 Sum_probs=54.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
.+++...++++.+.+.|++.|.+.-+ +|. ..+.++.+++.+|+..++.-+ . +-...+-.|+++||+.|-+
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~----t~~-a~e~I~~l~~~~~~~~iGaGT---V-lt~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFR----SDA-AVEAIRLLRQAQPEMLIGAGT---I-LNGEQALAAKEAGATFVVS 112 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT----STT-HHHHHHHHHHHCTTCEEEEEC---C-CSHHHHHHHHHHTCSEEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC----CCC-HHHHHHHHHHhCCCCEEeECC---c-CCHHHHHHHHHcCCCEEEe
Confidence 36788999999999999999988544 343 357788899999987676543 2 3477888999999999853
No 387
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=82.40 E-value=8.1 Score=36.82 Aligned_cols=121 Identities=14% Similarity=0.114 Sum_probs=63.9
Q ss_pred HHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCC-CCEEEEccCcCcCCHHHHHHHHHHHHhh-CCC
Q 015894 215 YRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMG-CSEISLGDTIGVGTPGTVIPMLEAVLDA-VPV 292 (398)
Q Consensus 215 ~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~G-ad~I~L~DT~G~~~P~~v~~lv~~l~~~-~p~ 292 (398)
+.++++.+++.|..- +.++ |.+..-+ + .+.++++.+.+.+ ...+.+ -|.|.+.+. .+..+++. +..
T Consensus 55 i~~~i~~~~~~g~~~-i~~t---GGEPll~--~-~l~~li~~~~~~~~~~~i~i-~TNG~ll~~----~~~~L~~~g~~~ 122 (340)
T 1tv8_A 55 MARIAKVYAELGVKK-IRIT---GGEPLMR--R-DLDVLIAKLNQIDGIEDIGL-TTNGLLLKK----HGQKLYDAGLRR 122 (340)
T ss_dssp HHHHHHHHHHTTCCE-EEEE---SSCGGGS--T-THHHHHHHHTTCTTCCEEEE-EECSTTHHH----HHHHHHHHTCCE
T ss_pred HHHHHHHHHHCCCCE-EEEe---CCCccch--h-hHHHHHHHHHhCCCCCeEEE-EeCccchHH----HHHHHHHCCCCE
Confidence 344555666677642 2232 3222112 2 3456777776664 346666 578887654 34444443 333
Q ss_pred CeEEEEeCC------------ccchHHHHHHHHHHhCCC-EEeeccccCCCCCCCCCCCCCccHHHHHHHHHhCCCC
Q 015894 293 DKLAVHFHD------------TYGQALSNILASLQMGIS-TVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVR 356 (398)
Q Consensus 293 ~~l~~H~Hn------------d~GlA~ANalaAl~aGa~-~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~~Gi~ 356 (398)
+.|.+++.+ ++...+.+...+.++|.. .+++.+ .-|. ---.+++++..++++|++
T Consensus 123 v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~~v~i~~vv-~~g~--------n~~ei~~~~~~~~~~g~~ 190 (340)
T 1tv8_A 123 INVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVI-QKGI--------NDDQIIPMLEYFKDKHIE 190 (340)
T ss_dssp EEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEEEEEEEE-CTTT--------TGGGHHHHHHHHHHTTCC
T ss_pred EEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCCCEEEEEEE-eCCC--------CHHHHHHHHHHHHhcCCe
Confidence 445555532 344556666667778873 233333 1121 123677888888877764
No 388
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=82.24 E-value=18 Score=33.17 Aligned_cols=181 Identities=13% Similarity=0.064 Sum_probs=104.2
Q ss_pred CCCEEEEecCCCCCcccCCCCHHHHHHHHHh-ccCCcEEEEeCCH-h-------------hHHHHHHcC-CCEEEEeccC
Q 015894 132 GLAVVEATSFVSPKWVPQLADAKDVMAAIQN-VEGARFPVLTPNL-K-------------GFEAAVAAG-AKEVAIFASA 195 (398)
Q Consensus 132 Gv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~-~~~~~l~~l~~n~-~-------------~ie~a~~~G-v~~v~i~~~~ 195 (398)
|.|.||+-...-.. .+.+++.+.++. +++..+..-.|.. + =++.+++.| ++.|.|-...
T Consensus 28 ~~D~vElRvD~l~~-----~~~~~v~~~l~~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~ 102 (231)
T 2ocz_A 28 DVNLIEWRADFLPK-----DEIVAVAPAIFEKFAGKEIIFTLRTVQEGGNITLSSQEYVDIIKEINAIYNPDYIDFEYFT 102 (231)
T ss_dssp TCSEEEEEGGGSCG-----GGHHHHHHHHHHHTTTSEEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHHCCSEEEEETTT
T ss_pred CCCEEEEEeccccc-----cCHHHHHHHHHHHcCCCcEEEEEeecccCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 88999997532211 124555555554 4444333333421 1 145677888 9999987653
Q ss_pred chHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCC
Q 015894 196 SESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGT 275 (398)
Q Consensus 196 Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~ 275 (398)
.+ +.++.++.. .++- +++- +...++ +.+....+++.++|||.+-|+=+. -+
T Consensus 103 ~~-------------------~~i~~~~~~-~kvI--~S~H----df~~tp-~el~~~~~~~~~~gaDivKia~~a--~~ 153 (231)
T 2ocz_A 103 HK-------------------SVFQEMLDF-PNLI--LSYH----NFEETP-ENLMEAFSEMTKLAPRVVKIAVMP--QS 153 (231)
T ss_dssp TG-------------------GGGGGGTTC-SSEE--EEEE----ESSCCC-TTHHHHHHHHHHTCCSEEEEEECC--SS
T ss_pred CH-------------------HHHHHhhcC-CeEE--EEec----CCCCCH-HHHHHHHHHHHHcCCCEEEEEeec--CC
Confidence 21 123344444 4443 2321 222333 888889999999999999888663 46
Q ss_pred HHHHHHHHHHHHhh---CCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHh
Q 015894 276 PGTVIPMLEAVLDA---VPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNG 352 (398)
Q Consensus 276 P~~v~~lv~~l~~~---~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~ 352 (398)
+.++.++++...+. .+..|+-.- +.-.++.-.-+.+-..|-...-+++.. .. ..|+.+.+++...|+.
T Consensus 154 ~~D~l~ll~~~~~~~~~~~~~P~I~~--~MG~~G~~SRi~~~~~GS~~Tf~~l~~-~s------APGQl~~~el~~~l~~ 224 (231)
T 2ocz_A 154 EQDVLDLMNYTRGFKTLNPEQEFATI--SMGKLGRLSRFAGDVIGSSWTYVSLDH-VS------GPGQVTLNDMKRIIEV 224 (231)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEE--ECHHHHGGGGGCHHHHTCCEEECBC-------------CCCBHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEE--EcCCCchhHHHHHHHhCCceEeccCCC-CC------CCCCCCHHHHHHHHHH
Confidence 77888887766532 344444331 222233344455566788887777732 23 4669999999988876
Q ss_pred CCC
Q 015894 353 LGV 355 (398)
Q Consensus 353 ~Gi 355 (398)
+..
T Consensus 225 l~~ 227 (231)
T 2ocz_A 225 LEM 227 (231)
T ss_dssp HC-
T ss_pred hhh
Confidence 543
No 389
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=82.20 E-value=10 Score=37.82 Aligned_cols=67 Identities=15% Similarity=0.128 Sum_probs=49.1
Q ss_pred HHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeec
Q 015894 251 AYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 251 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
.+.++.+.++|++.|.|-=+. ..|..+.++++.+++.++ +++.++.= .....+..++++||+.|-+.
T Consensus 146 ~e~~~~lveaGvdvIvldta~--G~~~~~~e~I~~ik~~~~-i~Vi~g~V----~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAH--GHSLNIIRTLKEIKSKMN-IDVIVGNV----VTEEATKELIENGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSC--CSBHHHHHHHHHHHTTCC-CEEEEEEE----CSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCC--CCcccHHHHHHHHHhcCC-CeEEEeec----CCHHHHHHHHHcCCCEEEEe
Confidence 466888889999988663233 368888999999999874 56665311 12456688899999999883
No 390
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=82.14 E-value=17 Score=36.85 Aligned_cols=128 Identities=15% Similarity=0.187 Sum_probs=73.2
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHh-ccCCcEE-EEeCCHhhHHHHHHcCCCEEEEeccCc-
Q 015894 120 VKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQN-VEGARFP-VLTPNLKGFEAAVAAGAKEVAIFASAS- 196 (398)
Q Consensus 120 ~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~-~~~~~l~-~l~~n~~~ie~a~~~Gv~~v~i~~~~S- 196 (398)
...+.++.|.++|++.|++.+.... .....+.++.+++ .|+..+. ..+.+.++.+.+.++|+|.|.+....-
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G~-----~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~ 311 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHGH-----SRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGS 311 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCS-----SHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCST
T ss_pred hHHHHHHHHHHhCCCEEEEEecCCc-----hHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCc
Confidence 3456788999999999999653210 0123455666663 4555443 334577888999999999998843211
Q ss_pred --hHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 015894 197 --ESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLG 268 (398)
Q Consensus 197 --d~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~ 268 (398)
-.......+.... ..+..+.+.+++.+++|.+ +.+-.+++.+.+ +.++||+.+.++
T Consensus 312 ~~~~~~~~~~g~p~~---~~l~~v~~~~~~~~ipvia---------~GGI~~~~di~k----ala~GAd~V~iG 369 (494)
T 1vrd_A 312 ICTTRVVAGVGVPQL---TAVMECSEVARKYDVPIIA---------DGGIRYSGDIVK----ALAAGAESVMVG 369 (494)
T ss_dssp TCHHHHHHCCCCCHH---HHHHHHHHHHHTTTCCEEE---------ESCCCSHHHHHH----HHHTTCSEEEES
T ss_pred cccccccCCCCccHH---HHHHHHHHHHhhcCCCEEE---------ECCcCCHHHHHH----HHHcCCCEEEEC
Confidence 0011112222332 3344445555556777641 233345655444 335899887765
No 391
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=82.09 E-value=3.6 Score=39.95 Aligned_cols=85 Identities=18% Similarity=0.171 Sum_probs=47.4
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCEEEE--------ccCcCcCC--H-HHHHHHHHHHHhhCCCC---------eEEEEe
Q 015894 240 PVEGMVPPSKVAYVSKQLYDMGCSEISL--------GDTIGVGT--P-GTVIPMLEAVLDAVPVD---------KLAVHF 299 (398)
Q Consensus 240 ~~~~r~~~~~l~~~a~~l~~~Gad~I~L--------~DT~G~~~--P-~~v~~lv~~l~~~~p~~---------~l~~H~ 299 (398)
|.-.|++.+.+.+.++++.+.|+..|.| +|..|... | .=+.+-|+.+|+.+|++ +..-|+
T Consensus 51 PGv~r~sid~l~~~~~~~~~~Gi~~v~LFgvp~~~~Kd~~gs~A~~~~g~v~~air~iK~~~pdl~vitDvcLc~YT~HG 130 (330)
T 1pv8_A 51 PGVARYGVKRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLLVACDVCLCPYTSHG 130 (330)
T ss_dssp TTCEEECHHHHHHHHHHHHHHTCCEEEEEECC--------------CCSHHHHHHHHHHHHSTTSEEEEEECCC------
T ss_pred CCceeecHHHHHHHHHHHHHCCCCEEEEecCCcccCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccccCCC
Confidence 4445678888888888888888877655 56656543 3 23778899999999974 455799
Q ss_pred CCcc----ch---------HHHHHHHHHHhCCCEEeec
Q 015894 300 HDTY----GQ---------ALSNILASLQMGISTVDSS 324 (398)
Q Consensus 300 Hnd~----Gl---------A~ANalaAl~aGa~~VD~S 324 (398)
|+-. |- -.-.++.-.+|||++|--|
T Consensus 131 HcGil~~~g~v~ND~Tl~~La~~Als~A~AGAdiVAPS 168 (330)
T 1pv8_A 131 HCGLLSENGAFRAEESRQRLAEVALAYAKAGCQVVAPS 168 (330)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHTCSEEEEC
T ss_pred ceeEECCCCcCccHHHHHHHHHHHHHHHHcCCCeeecc
Confidence 9742 31 0122556678999998544
No 392
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=81.97 E-value=17 Score=34.76 Aligned_cols=16 Identities=25% Similarity=0.258 Sum_probs=10.7
Q ss_pred CCCCccHHHHHHHHHh
Q 015894 337 ASGNVATEDVVYMLNG 352 (398)
Q Consensus 337 raGNa~lE~vv~~L~~ 352 (398)
..+|..-+.++...+.
T Consensus 214 ~~an~~P~~~~~l~~a 229 (316)
T 3e96_A 214 GLVNLLPQKAVEMLEA 229 (316)
T ss_dssp SGGGTCHHHHHHHHHH
T ss_pred chhhhhHHHHHHHHHH
Confidence 3667777777776654
No 393
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=81.97 E-value=35 Score=32.18 Aligned_cols=77 Identities=9% Similarity=-0.031 Sum_probs=39.1
Q ss_pred HHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHh-CCCCE--EEEccCcCc-CCHHHHHHHHHHHHhhCC
Q 015894 216 RDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYD-MGCSE--ISLGDTIGV-GTPGTVIPMLEAVLDAVP 291 (398)
Q Consensus 216 ~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~-~Gad~--I~L~DT~G~-~~P~~v~~lv~~l~~~~p 291 (398)
.+.++.|++.|.....-+ .|.-.+.+.+.+.+..+.+.+ .+... -.++...|. ++|+.+.++.+ ..|
T Consensus 85 i~la~~A~~~Gadavlv~-----~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~----~~p 155 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVV-----VPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLAS----ECE 155 (294)
T ss_dssp HHHHHHHHHTTCSEEEEE-----CCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHH----HCT
T ss_pred HHHHHHHHhcCCCEEEEC-----CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHh----hCC
Confidence 344566777777643111 344445566666666655544 24443 234555564 55665555532 246
Q ss_pred CCeEEE-EeCCc
Q 015894 292 VDKLAV-HFHDT 302 (398)
Q Consensus 292 ~~~l~~-H~Hnd 302 (398)
++ +++ ....|
T Consensus 156 ni-vgiKds~gd 166 (294)
T 2ehh_A 156 NI-VASKESTPN 166 (294)
T ss_dssp TE-EEEEECCSC
T ss_pred CE-EEEEeCCCC
Confidence 53 555 34444
No 394
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=81.93 E-value=33 Score=32.53 Aligned_cols=15 Identities=13% Similarity=0.195 Sum_probs=9.9
Q ss_pred CCCCccHHHHHHHHH
Q 015894 337 ASGNVATEDVVYMLN 351 (398)
Q Consensus 337 raGNa~lE~vv~~L~ 351 (398)
..+|..-+.++...+
T Consensus 218 ~~an~~P~~~~~l~~ 232 (304)
T 3cpr_A 218 VIGHAAPTALRELYT 232 (304)
T ss_dssp SGGGTCHHHHHHHHH
T ss_pred cHHHhhHHHHHHHHH
Confidence 366777777776654
No 395
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=81.81 E-value=21 Score=33.79 Aligned_cols=61 Identities=11% Similarity=-0.070 Sum_probs=28.4
Q ss_pred HHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhC-CCCE--EEEccCcCc-CCHHHHHHH
Q 015894 217 DVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM-GCSE--ISLGDTIGV-GTPGTVIPM 282 (398)
Q Consensus 217 ~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~-Gad~--I~L~DT~G~-~~P~~v~~l 282 (398)
+.++.|++.|..... ...|.-.+.+.+.+.+..+.+.+. +... -.++...|. ++|+.+.++
T Consensus 86 ~la~~A~~~Gadavl-----v~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 150 (297)
T 2rfg_A 86 RYAQHAQQAGADAVL-----CVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARL 150 (297)
T ss_dssp HHHHHHHHHTCSEEE-----ECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHHHHHHhcCCCEEE-----EcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 344556666665321 113444445556665555554442 3332 234444554 444544444
No 396
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=81.80 E-value=8.7 Score=37.41 Aligned_cols=91 Identities=20% Similarity=0.203 Sum_probs=62.2
Q ss_pred hCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc----------cCcCcC---CHHHHHHHHHHHHhhC
Q 015894 224 ELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLG----------DTIGVG---TPGTVIPMLEAVLDAV 290 (398)
Q Consensus 224 ~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~----------DT~G~~---~P~~v~~lv~~l~~~~ 290 (398)
..+..+.++|. | .+++.+.+.++.+.++|+|.|.|- |-.|.. .|..+.++++++++..
T Consensus 55 ~~~~p~~vQL~---g------~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v 125 (350)
T 3b0p_A 55 PEEHPIALQLA---G------SDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV 125 (350)
T ss_dssp GGGCSEEEEEE---C------SCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEeC---C------CCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh
Confidence 44556665554 2 257888889999999999987664 445543 4889999999999877
Q ss_pred CCCeEEEEe---CCccc---hHHHHHHHHHHhCCCEEeec
Q 015894 291 PVDKLAVHF---HDTYG---QALSNILASLQMGISTVDSS 324 (398)
Q Consensus 291 p~~~l~~H~---Hnd~G---lA~ANalaAl~aGa~~VD~S 324 (398)
+.||.+-. -++.. -...-+..+.++|++.|.++
T Consensus 126 -~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 126 -RVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVH 164 (350)
T ss_dssp -SSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred -CCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEe
Confidence 35677732 22221 23445566678999999875
No 397
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=81.73 E-value=6.2 Score=37.73 Aligned_cols=71 Identities=23% Similarity=0.276 Sum_probs=53.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcC-----------cCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHH
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTIG-----------VGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILAS 313 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaA 313 (398)
.+++.+.+.++.+.+.|++.|.+.-+-| ..+|+.+..+++..++. +.++.+|+|.+.+ ...+
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~~~~~-----i~~~ 236 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMA--GIKVAAHAHGASG-----IREA 236 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHT--TCEEEEEECSHHH-----HHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEeCCHHH-----HHHH
Confidence 4567888888888889999887765433 46788898888888764 3579999988753 4567
Q ss_pred HHhCCCEEe
Q 015894 314 LQMGISTVD 322 (398)
Q Consensus 314 l~aGa~~VD 322 (398)
+++|++.|.
T Consensus 237 ~~~g~~~i~ 245 (403)
T 3gnh_A 237 VRAGVDTIE 245 (403)
T ss_dssp HHTTCSEEE
T ss_pred HHhCCCEEe
Confidence 788987553
No 398
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=81.72 E-value=13 Score=35.18 Aligned_cols=61 Identities=15% Similarity=0.126 Sum_probs=29.0
Q ss_pred HHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhC-CCCE--EEEccCcCc-CCHHHHHHH
Q 015894 217 DVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM-GCSE--ISLGDTIGV-GTPGTVIPM 282 (398)
Q Consensus 217 ~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~-Gad~--I~L~DT~G~-~~P~~v~~l 282 (398)
+.++.|++.|.....-+ .|.-.+.+.+.+.+..+.+.+. +... -.++...|. ++|+.+.++
T Consensus 87 ~la~~a~~~Gadavlv~-----~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 151 (291)
T 3a5f_A 87 AMSKWAESIGVDGLLVI-----TPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKEL 151 (291)
T ss_dssp HHHHHHHHTTCSEEEEE-----CCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEc-----CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 44566666776543111 3444445666666655554443 3332 234444554 445554444
No 399
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=81.67 E-value=19 Score=33.33 Aligned_cols=146 Identities=10% Similarity=0.026 Sum_probs=0.0
Q ss_pred hhhhhhccCCCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhcc
Q 015894 85 DLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVE 164 (398)
Q Consensus 85 ~~~~~~~~~~p~~I~i~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~ 164 (398)
.|.+.--.+++.++-|.-.++++..-. .+.++.+.++|++.||+.......+.+.-.+.+++.+.+++ .
T Consensus 12 ~~~~~~~~~~~~klgi~~~~~~~~~~~----------~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~-~ 80 (296)
T 2g0w_A 12 HMTNANGNLKKCPITISSYTLGTEVSF----------PKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDE-H 80 (296)
T ss_dssp ----------CCCEEECGGGGTTTSCH----------HHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHH-T
T ss_pred hcccCCCCcCCCCceeechhcCCCCCH----------HHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHH-c
Q ss_pred CCcEEEEeC--CH---------------hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC
Q 015894 165 GARFPVLTP--NL---------------KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSI 227 (398)
Q Consensus 165 ~~~l~~l~~--n~---------------~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~ 227 (398)
++++.++.. +. +.++.|.+.|++.|.+... -..+.+...+.+.++.++| .|+
T Consensus 81 gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~g~~---------~~~~~~~~~~~l~~l~~~a--~Gv 149 (296)
T 2g0w_A 81 NMKVTEVEYITQWGTAEDRTAEQQKKEQTTFHMARLFGVKHINCGLL---------EKIPEEQIIVALGELCDRA--EEL 149 (296)
T ss_dssp TCEEEEEECBCCCSSTTTCCHHHHHHHHHHHHHHHHHTCCEEEECCC---------SCCCHHHHHHHHHHHHHHH--TTS
T ss_pred CCceEeehhhhccccCChHHHHHHHHHHHHHHHHHHcCCCEEEEcCC---------CCCCHHHHHHHHHHHHHHh--cCC
Q ss_pred cEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 015894 228 PVRGYLSCVVGCPVEGMVPPSKVAYVSKQL 257 (398)
Q Consensus 228 ~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l 257 (398)
.+...-. +...-.+++.+.++++.+
T Consensus 150 ~l~lE~~-----~~~~~~~~~~~~~l~~~v 174 (296)
T 2g0w_A 150 IIGLEFM-----PYSGVADLQAAWRVAEAC 174 (296)
T ss_dssp EEEEECC-----TTSSSCSHHHHHHHHHHH
T ss_pred EEEEEec-----CCCCCCCHHHHHHHHHHh
No 400
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=81.65 E-value=20 Score=35.34 Aligned_cols=69 Identities=7% Similarity=0.036 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHh-ccCCcEEE-EeCCHhhHHHHHHcCCCEEEEe
Q 015894 119 VVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQN-VEGARFPV-LTPNLKGFEAAVAAGAKEVAIF 192 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~-~~~~~l~~-l~~n~~~ie~a~~~Gv~~v~i~ 192 (398)
+...+.++.+.++|++.|++-..... + ...++.++.+++ .++..+.+ -+.+.++.+.+.++|+|.|.+.
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~---~--~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAH---A--KYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCS---S--HHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCC---c--HhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEc
Confidence 45577899999999999999543210 0 112455666664 35665554 3567888999999999999984
No 401
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=81.63 E-value=22 Score=33.34 Aligned_cols=168 Identities=14% Similarity=0.127 Sum_probs=94.2
Q ss_pred HHHHHhcCCCEEEEecCCCCCc-ccCCCCHHHHHHHHHhccCCcEEEEeC--------C-------HhhHHHHHHcCCCE
Q 015894 125 IKLLVSSGLAVVEATSFVSPKW-VPQLADAKDVMAAIQNVEGARFPVLTP--------N-------LKGFEAAVAAGAKE 188 (398)
Q Consensus 125 a~~L~~aGv~~IEvG~~~~~~~-~p~~~D~~~v~~~i~~~~~~~l~~l~~--------n-------~~~ie~a~~~Gv~~ 188 (398)
+..-.+.|.+.||+=.-..... -| +. .+++.+++..++.+.++.| + ..|++.+.+.|++.
T Consensus 14 a~~A~~~GAdRIELc~~L~~GGlTP---S~-g~i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadG 89 (256)
T 1twd_A 14 ALTAQQNGADRVELCAAPKEGGLTP---SL-GVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPG 89 (256)
T ss_dssp HHHHHHTTCSEEEECBCGGGTCBCC---CH-HHHHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHcCCCEEEEcCCcccCCCCC---CH-HHHHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCE
Confidence 4556789999999954211000 01 12 3344455445677777775 2 13577889999998
Q ss_pred EEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 015894 189 VAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLG 268 (398)
Q Consensus 189 v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~ 268 (398)
|-+-+=..|-.+ + .+.++++++.|+ |+.++ +-.+| |.. .++. +..+.+.++|+++|-
T Consensus 90 vV~G~Lt~dg~i------D----~~~~~~Li~~a~--~~~vT--FHRAf---D~~-~d~~---~ale~L~~lG~~rIL-- 146 (256)
T 1twd_A 90 LVTGVLDVDGNV------D----MPRMEKIMAAAG--PLAVT--FHRAF---DMC-ANPL---YTLNNLAELGIARVL-- 146 (256)
T ss_dssp EEECCBCTTSSB------C----HHHHHHHHHHHT--TSEEE--ECGGG---GGC-SCHH---HHHHHHHHHTCCEEE--
T ss_pred EEEeeECCCCCc------C----HHHHHHHHHHhC--CCcEE--EECch---hcc-CCHH---HHHHHHHHcCCCEEE--
Confidence 887544333221 1 345566677665 56554 44445 222 2443 346778889999987
Q ss_pred cCcCcCCH-HHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeec
Q 015894 269 DTIGVGTP-GTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 269 DT~G~~~P-~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
|.|.... .+-.++++.+.+....+.|-.= -|.-..|.-.-+..|++.++.|
T Consensus 147 -TSG~~~~a~~g~~~L~~Lv~~a~~i~Im~G----gGv~~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 147 -TSGQKSDALQGLSKIMELIAHRDAPIIMAG----AGVRAENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp -ECTTSSSTTTTHHHHHHHHTSSSCCEEEEE----SSCCTTTHHHHHHHTCSEEEEC
T ss_pred -CCCCCCCHHHHHHHHHHHHHhhCCcEEEec----CCcCHHHHHHHHHcCCCeEeEC
Confidence 6665433 4444556666554332222111 1232334333337899999977
No 402
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=81.61 E-value=21 Score=36.84 Aligned_cols=255 Identities=12% Similarity=0.099 Sum_probs=145.4
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc-cCCcEEEEeCCHhhH---HHHHHcCCCEEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV-EGARFPVLTPNLKGF---EAAVAAGAKEVA 190 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~-~~~~l~~l~~n~~~i---e~a~~~Gv~~v~ 190 (398)
.++..++..|.+.-.+.|+|.|=+.|--++ .|..++.+.+.+. .++.+.+-.-+.+++ +.-++. .|.|.
T Consensus 204 ~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a------~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~-sDgim 276 (511)
T 3gg8_A 204 VIGEKDKHDILNFGIPMGCNFIAASFVQSA------DDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAE-ADGIM 276 (511)
T ss_dssp SSCHHHHHHHHHTTTTTTCCEEEETTCCSH------HHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHH-CSCEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCH------HHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHh-CCeEE
Confidence 367778777767778899999988764332 3445555555432 346666666665544 333333 36565
Q ss_pred EeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEE-EeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE-c
Q 015894 191 IFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGY-LSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL-G 268 (398)
Q Consensus 191 i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~-l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L-~ 268 (398)
|. -.|. ...+..++.....+.+++.|+++|..|-+. =+.. +.-...+.+..++-+++.... .|+|.|-| .
T Consensus 277 Va--RGDL----gvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLe-SMi~~p~PTRAEvsDVAnAV~-dGaDavMLSg 348 (511)
T 3gg8_A 277 IA--RGDL----GMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLE-SMIKNPRPTRAEAADVANAVL-DGTDCVMLSG 348 (511)
T ss_dssp EE--HHHH----HHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSG-GGGTCSSCCHHHHHHHHHHHH-HTCSEEEESH
T ss_pred Ee--cchh----cCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHH-HhhcCCCccHHHHHHHHHHHH-hCCCEEEecc
Confidence 53 2233 222356777777789999999999987521 1110 011123456778888776554 69999999 4
Q ss_pred cCcCcCCHHHHHHHHHHHHhhCC-CCeE--EE-----Ee--CCc--cchHHHHHHHHHHhCCC-EEeeccccC-----CC
Q 015894 269 DTIGVGTPGTVIPMLEAVLDAVP-VDKL--AV-----HF--HDT--YGQALSNILASLQMGIS-TVDSSVSGL-----GG 330 (398)
Q Consensus 269 DT~G~~~P~~v~~lv~~l~~~~p-~~~l--~~-----H~--Hnd--~GlA~ANalaAl~aGa~-~VD~Sv~Gl-----Ge 330 (398)
.|+-.-.|.+..+.+..+....- .... .+ +. ..+ -..|.|...+|...+|. +|-.|-.|- ..
T Consensus 349 ETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~iSr 428 (511)
T 3gg8_A 349 ETANGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQEAVARAAVETAECVNAAIILALTETGQTARLIAK 428 (511)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhhcccCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHh
Confidence 67778899888887777665431 1000 00 01 111 23555566667788988 667777773 22
Q ss_pred -CCCCCCCCCCccHHHHHHHHHh-CCCC-----CccChHHHHHHHHHHHHHhCCCCCCCccc
Q 015894 331 -CPYAKGASGNVATEDVVYMLNG-LGVR-----TNVDIRKLMIAGDFICKHLGRTSGSKTAI 385 (398)
Q Consensus 331 -cp~a~graGNa~lE~vv~~L~~-~Gi~-----t~iDl~~L~~~~~~v~~~~g~~~~~~~pi 385 (398)
-|-+|- -.-.+-+.+...|.- .|+. ..-|.+.+.+.+.......|+--+...-+
T Consensus 429 ~RP~~PI-ia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vV 489 (511)
T 3gg8_A 429 YRPMQPI-LALSASESTIKHLQVIRGVTTMQVPSFQGTDHVIRNAIVVAKERELVTEGESIV 489 (511)
T ss_dssp TCCSSCE-EEEESCHHHHHHGGGSTTEEEEECCC--CHHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred hCCCCCE-EEEcCCHHHHHHhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEE
Confidence 122221 113344777776664 3553 12345555555555555566554444443
No 403
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=81.49 E-value=38 Score=32.35 Aligned_cols=128 Identities=16% Similarity=0.095 Sum_probs=82.1
Q ss_pred HHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHH
Q 015894 179 EAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLY 258 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~ 258 (398)
+...+.+++.|.|..+.. +.++...++ ++..+++.|+++..++++. + .+.+.+.+....+.
T Consensus 36 ~~L~~~~pd~vsVT~~~~--------g~~r~~t~~----~a~~i~~~g~~~i~Hltc~----~---~~~~~l~~~L~~~~ 96 (310)
T 3apt_A 36 EELKAFRPAFVSITYGAM--------GSTRERSVA----WAQRIQSLGLNPLAHLTVA----G---QSRKEVAEVLHRFV 96 (310)
T ss_dssp HHHGGGCCSEEEECCCST--------TCSHHHHHH----HHHHHHHTTCCBCEEEECT----T---SCHHHHHHHHHHHH
T ss_pred HHHhcCCCCEEEEecCCC--------CCcchhHHH----HHHHHHHhCCCeEEEeecC----C---CCHHHHHHHHHHHH
Confidence 334445788888876532 334444443 4455567899998888852 3 47788999998999
Q ss_pred hCCCCEE-EE-ccCcCc-C--------CHHHHHHHHHHHHhhCCC-CeEEEEeC----C---ccchHHHHHHHHHHhCCC
Q 015894 259 DMGCSEI-SL-GDTIGV-G--------TPGTVIPMLEAVLDAVPV-DKLAVHFH----D---TYGQALSNILASLQMGIS 319 (398)
Q Consensus 259 ~~Gad~I-~L-~DT~G~-~--------~P~~v~~lv~~l~~~~p~-~~l~~H~H----n---d~GlA~ANalaAl~aGa~ 319 (398)
++|++.| .| .|.... . .. ...+||+.+++..++ ..|++=++ - +...-+.+...=+++||+
T Consensus 97 ~~GI~niLaLrGD~p~~~g~~~~~~~~f~-~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~d~~~Lk~Kv~aGAd 175 (310)
T 3apt_A 97 ESGVENLLALRGDPPRGERVFRPHPEGFR-YAAELVALIRERYGDRVSVGGAAYPEGHPESESLEADLRHFKAKVEAGLD 175 (310)
T ss_dssp HTTCCEEEEECCCCSTTCCSCCCCTTSCS-SHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHHHHHHHHHHHHHHCS
T ss_pred HCCCCEEEEEcCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCC
Confidence 9999864 33 343221 1 22 577888888876443 45666553 2 233346666677899999
Q ss_pred EEeeccc
Q 015894 320 TVDSSVS 326 (398)
Q Consensus 320 ~VD~Sv~ 326 (398)
.+=|-..
T Consensus 176 f~iTQ~f 182 (310)
T 3apt_A 176 FAITQLF 182 (310)
T ss_dssp EEEECCC
T ss_pred EEEeccc
Confidence 8877643
No 404
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=81.45 E-value=37 Score=32.20 Aligned_cols=153 Identities=12% Similarity=0.027 Sum_probs=85.5
Q ss_pred CCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeC--CHhhHHHHHHcC--CCEEEEeccC-chHHHhhhcCCC
Q 015894 133 LAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTP--NLKGFEAAVAAG--AKEVAIFASA-SESFSKSNINCT 207 (398)
Q Consensus 133 v~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~--n~~~ie~a~~~G--v~~v~i~~~~-Sd~~~~~~~~~s 207 (398)
+..|-+.....|-.. .+..++++.+++. +.++...+. ..+-++...++| ++.+.+.+.. ++-..+.-.+..
T Consensus 142 ~~~v~~sggGEPll~---~~l~~ll~~~~~~-g~~i~l~TNG~~~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i~~~~ 217 (342)
T 2yx0_A 142 PTHAAISLSGEPMLY---PYMGDLVEEFHKR-GFTTFIVTNGTIPERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPM 217 (342)
T ss_dssp CCEEEECSSSCGGGS---TTHHHHHHHHHHT-TCEEEEEECSCCHHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBS
T ss_pred CCEEEEcCCCcccch---hhHHHHHHHHHHC-CCcEEEEcCCCcHHHHHHHHhcCCCCCEEEEEccCCCHHHHHHHhCCC
Confidence 455666422223211 1455666666543 454444432 233467778877 8888887655 332222211211
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc------cC------cCcCC
Q 015894 208 IEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLG------DT------IGVGT 275 (398)
Q Consensus 208 ~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~------DT------~G~~~ 275 (398)
....++.+.+.++.+++.|+.+.+.+.. .+.....+ +.++++.+.+.|++.|.+. .+ ....+
T Consensus 218 ~~~~~~~~~~~i~~l~~~g~~v~i~~~l---~~g~n~~~---~~~l~~~l~~~~~~~i~l~~~~~~~~~~~~l~~~~~~~ 291 (342)
T 2yx0_A 218 IPDGWERILRFLELMRDLPTRTVVRLTL---VKGENMHS---PEKYAKLILKARPMFVEAKAYMFVGYSRNRLTINNMPS 291 (342)
T ss_dssp SSCHHHHHHHHHHHHTTCSSEEEEEEEE---CTTTTCCC---HHHHHHHHHHHCCSEEEEEECC------CCCCGGGSCC
T ss_pred cccHHHHHHHHHHHHHhCCCCEEEEEEE---ECCccHHH---HHHHHHHHHHcCCCEEEEEeeeecCCCcccccccCCCC
Confidence 1234566667778888889877654443 23222222 5666666777888876641 11 22445
Q ss_pred HHHHHHHHHHHHhhCCCCeE
Q 015894 276 PGTVIPMLEAVLDAVPVDKL 295 (398)
Q Consensus 276 P~~v~~lv~~l~~~~p~~~l 295 (398)
++++.++.+.+++.+|...|
T Consensus 292 ~e~~~~~~~~l~~~l~~~~I 311 (342)
T 2yx0_A 292 HQDIREFAEALVKHLPGYHI 311 (342)
T ss_dssp HHHHHHHHHHHHTTCTTEEE
T ss_pred HHHHHHHHHHHHHhccCCce
Confidence 78899999999988875444
No 405
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=81.41 E-value=13 Score=36.51 Aligned_cols=94 Identities=15% Similarity=0.052 Sum_probs=63.9
Q ss_pred CCCHHHHHHHHHHHHhcCC--CEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeCCHhhHHHHHHcC-CCEEEE
Q 015894 115 IVPAVVKVELIKLLVSSGL--AVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAG-AKEVAI 191 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv--~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~n~~~ie~a~~~G-v~~v~i 191 (398)
.++.++-+++++.|.+.|+ ..||--. .+ .|.+ -++.+++..++.+---+.+..+++.+++.| +|.|.+
T Consensus 197 ~~~~~~A~~~~~~l~~~~i~~~~iEqP~--~~------~d~~-~~~~l~~~~~iPIdE~~~~~~~~~~~~~~~~~d~v~~ 267 (391)
T 3gd6_A 197 LLNWKDAHRAIKRLTKYDLGLEMIESPA--PR------NDFD-GLYQLRLKTDYPISEHVWSFKQQQEMIKKDAIDIFNI 267 (391)
T ss_dssp CSCHHHHHHHHHHHTTCCSSCCEEECCS--CT------TCHH-HHHHHHHHCSSCEEEECCCHHHHHHHHHHTCCSEEEE
T ss_pred CcCHHHHHHHHHHHHhcCCCcceecCCC--Ch------hhHH-HHHHHHHHcCCCcCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 4789999999999999999 9999532 11 2443 344555433455522335788898888866 688877
Q ss_pred eccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 015894 192 FASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVR 230 (398)
Q Consensus 192 ~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~ 230 (398)
=.. +--.+....++++.|+++|+.+.
T Consensus 268 k~~-------------~~GGit~~~~ia~~A~~~gi~~~ 293 (391)
T 3gd6_A 268 SPV-------------FIGGLTSAKKAAYAAEVASKDVV 293 (391)
T ss_dssp CHH-------------HHTSHHHHHHHHHHHHHTTCEEE
T ss_pred Cch-------------hcCCHHHHHHHHHHHHHcCCEEE
Confidence 221 11135667788999999999876
No 406
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=81.41 E-value=31 Score=33.83 Aligned_cols=124 Identities=12% Similarity=0.079 Sum_probs=78.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC--------------CCC---------------C----CCCHH---
Q 015894 205 NCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGC--------------PVE---------------G----MVPPS--- 248 (398)
Q Consensus 205 ~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~--------------~~~---------------~----r~~~~--- 248 (398)
+...++.++..+++++.+++.|-.+...|... |- |-. . ..+.+
T Consensus 71 gi~~d~~i~~~k~l~~avH~~G~~i~~QL~H~-Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~mt~~eI~ 149 (362)
T 4ab4_A 71 GIWNDEQVRGWNNVTKAVHAAGGRIFLQLWHV-GRISHPSYLNGELPVAPSAIQPKGHVSLVRPLSDYPTPRALETEEIN 149 (362)
T ss_dssp BCSSHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSCCGGGTTTCCCEESSCCCCSSBCSSCSSCCBCCCCEECCHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHhcCCEEEEEeccC-cccccccccCCCcccCCCCCCCCccccccccccCCCCCCcCCHHHHH
Confidence 33445678888999999999999887777652 10 000 0 01222
Q ss_pred ----HHHHHHHHHHhCCCCEEEEc-------------------cCcCcC---CHHHHHHHHHHHHhhCCCCeEEEEeCCc
Q 015894 249 ----KVAYVSKQLYDMGCSEISLG-------------------DTIGVG---TPGTVIPMLEAVLDAVPVDKLAVHFHDT 302 (398)
Q Consensus 249 ----~l~~~a~~l~~~Gad~I~L~-------------------DT~G~~---~P~~v~~lv~~l~~~~p~~~l~~H~Hnd 302 (398)
.+.+.++.+.++|.|.|-|- |-.|.. .+.-+.++|+++|+.++..+|++-.+-+
T Consensus 150 ~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~ 229 (362)
T 4ab4_A 150 DIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPR 229 (362)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeecc
Confidence 44455667788999988773 333432 2345778999999988633788876643
Q ss_pred c---c--------hHHHHHHHHHHhCCCEEeeccccCC
Q 015894 303 Y---G--------QALSNILASLQMGISTVDSSVSGLG 329 (398)
Q Consensus 303 ~---G--------lA~ANalaAl~aGa~~VD~Sv~GlG 329 (398)
- | .++.-+.+.-++|++.|+++-...|
T Consensus 230 ~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~ 267 (362)
T 4ab4_A 230 ADAHDMGDADRAETFTYVARELGKRGIAFICSREREAD 267 (362)
T ss_dssp CCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCT
T ss_pred ccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCC
Confidence 1 1 2333344445689999999875533
No 407
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=81.39 E-value=16 Score=35.59 Aligned_cols=95 Identities=11% Similarity=0.013 Sum_probs=63.0
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEE--eCCHhhHHHHHHcC-CCEEEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVL--TPNLKGFEAAVAAG-AKEVAI 191 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l--~~n~~~ie~a~~~G-v~~v~i 191 (398)
.++.++-+++++.|.+.|++.||-.++ + .|. +.++.+++..++.+.+= +.+..+++.+++.| +|.|.+
T Consensus 200 ~~~~~~a~~~~~~l~~~~i~~iEqP~~--~------~~~-~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~i 270 (384)
T 2pgw_A 200 GWSVHDAINMCRKLEKYDIEFIEQPTV--S------WSI-PAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICI 270 (384)
T ss_dssp CCCHHHHHHHHHHHGGGCCSEEECCSC--T------TCH-HHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEeCCCC--h------hhH-HHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 468899999999999999999995431 1 233 34445553333433321 23678899888876 788877
Q ss_pred eccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEE
Q 015894 192 FASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRG 231 (398)
Q Consensus 192 ~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~ 231 (398)
=.. +--.+....++++.|+++|+.+.+
T Consensus 271 k~~-------------~~GGit~~~~i~~~A~~~g~~~~~ 297 (384)
T 2pgw_A 271 GPR-------------EIGGIQPMMKAAAVAEAAGLKICI 297 (384)
T ss_dssp CHH-------------HHTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cch-------------hhCCHHHHHHHHHHHHHCCCeEee
Confidence 211 011356667888999999998763
No 408
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=81.36 E-value=25 Score=32.41 Aligned_cols=163 Identities=12% Similarity=0.068 Sum_probs=88.4
Q ss_pred HHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhcc--CCcEEEEeCCHhhHHHHHHcCCCEEEEeccCchHHHh
Q 015894 124 LIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVE--GARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSK 201 (398)
Q Consensus 124 ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~--~~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~ 201 (398)
.++.+.++|.|.|++|.-.. -..+.+.+.++++. +..+.-+..+...+ ..|+|.+-+..=.|.-
T Consensus 23 ~~~~~~~~GtD~i~vGGs~g-------vt~~~~~~~v~~ik~~~~Pvvlfp~~~~~v----~~gaD~~l~pslln~~--- 88 (228)
T 3vzx_A 23 QLEILCESGTDAVIIGGSDG-------VTEDNVLRMMSKVRRFLVPCVLEVSAIEAI----VPGFDLYFIPSVLNSK--- 88 (228)
T ss_dssp HHHHHHTSSCSEEEECCCSC-------CCHHHHHHHHHHHTTSSSCEEEECSCGGGC----CSCCSEEEEEEETTBS---
T ss_pred HHHHHHHcCCCEEEECCcCC-------CCHHHHHHHHHHhhccCCCEEEeCCCHHHc----cccCCEEEEeeecCCC---
Confidence 45557899999999996221 12344555555443 33333333455443 3689977664322221
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHhCCC-----cE--EEEEeeeecCCCCCC---------CCHHHHHHHHHHHHhCCCCEE
Q 015894 202 SNINCTIEDSLIRYRDVALAARELSI-----PV--RGYLSCVVGCPVEGM---------VPPSKVAYVSKQLYDMGCSEI 265 (398)
Q Consensus 202 ~~~~~s~~~~l~~~~~~v~~ak~~G~-----~v--~~~l~~~fg~~~~~r---------~~~~~l~~~a~~l~~~Gad~I 265 (398)
+-.+ .+. .-++.+|+.|+ ++ ++|+... |.... .+++.+..++....-+|.+.|
T Consensus 89 -~~~~----i~g---~~~~a~~~~g~~~~~~e~i~~gYivv~---p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~~~V 157 (228)
T 3vzx_A 89 -NADW----IVG---MHQKAMKEYGELMSMEEIVAEGYCIAN---PDCKAAALTEADADLNMDDIVAYARVSELLQLPIF 157 (228)
T ss_dssp -SGGG----TTH---HHHHHHHHHHHHHHHSCEEEEEEEECC---SSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred -Ccch----hhh---HHHHHHHHcCCCCcccceeeeEEEEEC---CCCcceeeecccCCCCHHHHHHHHHHHHHcCCCEE
Confidence 0001 111 11233566674 43 5666642 32211 256888888887877899999
Q ss_pred EEccCcCcCCHHHHHHHHHHHHhhCCCCeE--EEEeCCccchHHHHHHHHHHhCCCEE
Q 015894 266 SLGDTIGVGTPGTVIPMLEAVLDAVPVDKL--AVHFHDTYGQALSNILASLQMGISTV 321 (398)
Q Consensus 266 ~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l--~~H~Hnd~GlA~ANalaAl~aGa~~V 321 (398)
++-= .|.-. -.++++.+++..+++|+ ++-.++- -....+.+||+.|
T Consensus 158 Yld~-sG~~~---~~~~i~~i~~~~~~~Pv~vGGGI~t~------e~a~~~~~gAD~V 205 (228)
T 3vzx_A 158 YLEY-SGVLG---DIEAVKKTKAVLETSTLFYGGGIKDA------ETAKQYAEHADVI 205 (228)
T ss_dssp EEEC-TTSCC---CHHHHHHHHHHCSSSEEEEESSCCSH------HHHHHHHTTCSEE
T ss_pred EecC-CCCcC---CHHHHHHHHHhcCCCCEEEeCCCCCH------HHHHHHHhCCCEE
Confidence 8765 56432 36778888887633344 4444432 1222223699865
No 409
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=81.23 E-value=11 Score=35.50 Aligned_cols=15 Identities=20% Similarity=0.102 Sum_probs=9.7
Q ss_pred CCCCccHHHHHHHHH
Q 015894 337 ASGNVATEDVVYMLN 351 (398)
Q Consensus 337 raGNa~lE~vv~~L~ 351 (398)
..+|..-+.++...+
T Consensus 195 ~~an~~P~~~~~l~~ 209 (288)
T 2nuw_A 195 SFTNFIPEVIVKQRD 209 (288)
T ss_dssp GGGGTCHHHHHHHHH
T ss_pred cHHHhCHHHHHHHHH
Confidence 366777777766554
No 410
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=81.19 E-value=4.1 Score=39.42 Aligned_cols=69 Identities=13% Similarity=0.237 Sum_probs=44.4
Q ss_pred HHHHHHHHHhCCCCEEEEccCcCc---CCHHHHHHHH----HHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEe
Q 015894 250 VAYVSKQLYDMGCSEISLGDTIGV---GTPGTVIPML----EAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVD 322 (398)
Q Consensus 250 l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv----~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD 322 (398)
+.++++...++|++.|.+.|+.|. ++|...++++ +.+.+.+...+ -+|+.-+.+.-+ -.-.+.|++.++
T Consensus 192 ~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~~-iih~~g~~~~~l---~~~~~~g~d~i~ 267 (348)
T 4ay7_A 192 SIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVNSVT-VLHICGNVNPIL---SDMADCGFEGLS 267 (348)
T ss_dssp HHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSSSEE-EEECCSCCHHHH---HHHHTSCCSEEE
T ss_pred HHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhccCCc-EEEecCCcHHHH---HHHHHhcccccc
Confidence 334555666789999999999875 8898877654 45555566543 467765433222 222368988764
No 411
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=81.09 E-value=11 Score=34.28 Aligned_cols=122 Identities=8% Similarity=0.013 Sum_probs=59.5
Q ss_pred hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc---EEEEEee--eecCCCCC--CCCHH
Q 015894 176 KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIP---VRGYLSC--VVGCPVEG--MVPPS 248 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~---v~~~l~~--~fg~~~~~--r~~~~ 248 (398)
+-++.+.+.|.+.|.++... +.. -.....+. +.+.++.+.+++.|++ +.+...+ .++.++.. ....+
T Consensus 16 ~~l~~~~~~G~~~iEl~~~~-~~~-~~~~~~~~----~~~~~~~~~l~~~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~ 89 (287)
T 2x7v_A 16 RVPQDTVNIGGNSFQIFPHN-ARS-WSAKLPSD----EAATKFKREMKKHGIDWENAFCHSGYLINLASPKDDIWQKSVE 89 (287)
T ss_dssp GHHHHHHHTTCSEEEECSCC-CSS-SCCCCCCH----HHHHHHHHHHHHHTCCGGGEEEECCTTCCTTCSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCC-ccc-ccccCCCH----HHHHHHHHHHHHcCCCcceeEEecccccccCCCCHHHHHHHHH
Confidence 34678888999988886421 100 00001121 2234555667788887 3321111 01111100 01124
Q ss_pred HHHHHHHHHHhCCCCEEEEcc--CcCcCCHHHHHHHHHHHHh---hCCCCeEEEEeCCcc
Q 015894 249 KVAYVSKQLYDMGCSEISLGD--TIGVGTPGTVIPMLEAVLD---AVPVDKLAVHFHDTY 303 (398)
Q Consensus 249 ~l~~~a~~l~~~Gad~I~L~D--T~G~~~P~~v~~lv~~l~~---~~p~~~l~~H~Hnd~ 303 (398)
.+.+.++.+.++|++.|.+.= ..+.........+++.+++ ...++.|.+|.|+..
T Consensus 90 ~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~ 149 (287)
T 2x7v_A 90 LLKKEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQK 149 (287)
T ss_dssp HHHHHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCCC
Confidence 566677777788998887621 1111112233344444433 324577888888653
No 412
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=81.04 E-value=7.6 Score=36.53 Aligned_cols=120 Identities=11% Similarity=0.055 Sum_probs=66.1
Q ss_pred hHHHHHHcCCCEEEEecc-CchHHHhhhcCCCHHHH-HHHHHHHHHHHHhCCCcEEEEEeeeecCCCCC--C----CCHH
Q 015894 177 GFEAAVAAGAKEVAIFAS-ASESFSKSNINCTIEDS-LIRYRDVALAARELSIPVRGYLSCVVGCPVEG--M----VPPS 248 (398)
Q Consensus 177 ~ie~a~~~Gv~~v~i~~~-~Sd~~~~~~~~~s~~~~-l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~--r----~~~~ 248 (398)
-++.+.++|.+.|-++.. .+.. ...+.+++.. .+.+.++.+.+++.|+.+.. +. ++.+... . ...+
T Consensus 41 ~l~~aa~~G~~~VEl~~~~~~~~---~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~-~~--~~~~~~~~~~~~~~~~~~ 114 (305)
T 3obe_A 41 GLNRLAKAGYTDLEIFGYREDTG---KFGDYNPKNTTFIASKDYKKMVDDAGLRISS-SH--LTPSLREYTKENMPKFDE 114 (305)
T ss_dssp HHHHHHHHTCCEEEECCBCTTTC---CBCCC----CCCBCHHHHHHHHHHTTCEEEE-EB--CCCSCCCCCGGGHHHHHH
T ss_pred HHHHHHHcCCCEEEecccccccc---cccCcCcccccccCHHHHHHHHHHCCCeEEE-ee--ccccccccchhhHHHHHH
Confidence 467888899999998743 0000 0012211100 01234556677889998752 22 1111110 0 1134
Q ss_pred HHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhC-----CCCeEEEEeCCc
Q 015894 249 KVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAV-----PVDKLAVHFHDT 302 (398)
Q Consensus 249 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~-----p~~~l~~H~Hnd 302 (398)
.+.+.++.+.++|++.|.++-.-...++.....+++.+++.. -++.|.+|.|+.
T Consensus 115 ~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 173 (305)
T 3obe_A 115 FWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSN 173 (305)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEECCSG
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 666778888889999998863222235556655555555432 257899999985
No 413
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=81.02 E-value=7.4 Score=38.35 Aligned_cols=93 Identities=12% Similarity=0.075 Sum_probs=54.1
Q ss_pred HHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccC---cCcCCHHHHHHHHHHHHhhCCC
Q 015894 216 RDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDT---IGVGTPGTVIPMLEAVLDAVPV 292 (398)
Q Consensus 216 ~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT---~G~~~P~~v~~lv~~l~~~~p~ 292 (398)
.+.++.+++.|+.+.+.+. + ....+.++.+.+.|++.+.+--. .+...|.....-+..+++.++
T Consensus 145 ~~~i~~~~~~g~~v~~~v~-----~-------~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~- 211 (393)
T 2qr6_A 145 SERIAQVRDSGEIVAVRVS-----P-------QNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLD- 211 (393)
T ss_dssp HHHHHHHHHTTSCCEEEEC-----T-------TTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCS-
T ss_pred HHHHHHHhhcCCeEEEEeC-----C-------ccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcC-
Confidence 4567788888887754332 1 11234566677889998876321 123334212223566777664
Q ss_pred CeEEEEeCCccchHHHHHHHHHHhCCCEEeecc
Q 015894 293 DKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 293 ~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv 325 (398)
+|+.+- ..+...-+..++++||+.|.++.
T Consensus 212 ~pvi~g----gi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 212 VPVIAG----GVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp SCEEEE----CCCSHHHHHHHHTTTCSEEEESC
T ss_pred CCEEEC----CcCCHHHHHHHHHcCCCEEEECC
Confidence 456662 12345567888899999999954
No 414
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=80.75 E-value=20 Score=37.11 Aligned_cols=255 Identities=13% Similarity=0.104 Sum_probs=144.3
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc-cCCcEEEEeCCHhhH---HHHHHcCCCEEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV-EGARFPVLTPNLKGF---EAAVAAGAKEVA 190 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~-~~~~l~~l~~n~~~i---e~a~~~Gv~~v~ 190 (398)
.++..++..|.+.-.+.|+|.|=+.|--++ .|..++.+.+.+. .++.+.+-.-+.+++ +.-++. .|.|.
T Consensus 213 ~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a------~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~~-sDGIM 285 (520)
T 3khd_A 213 IISEKDKNDILNFAIPMGCNFIAASFIQSA------DDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAE-SDGIM 285 (520)
T ss_dssp SSCHHHHHHHHHTHHHHTCCEEEETTCCSH------HHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHH-SSCEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCH------HHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHHh-CCcEE
Confidence 367788887878888999999988764332 3444445555432 245666666565544 333333 35555
Q ss_pred EeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEE-EeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc-
Q 015894 191 IFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGY-LSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLG- 268 (398)
Q Consensus 191 i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~-l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~- 268 (398)
|. -.|. ..-+..++.....+.+++.|+++|..|-+. =+... .-...+.+..++-+++..+. -|+|.|-|.
T Consensus 286 VA--RGDL----gvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeS-Mi~~p~PTRAEvsDVanAVl-dGaDavMLSg 357 (520)
T 3khd_A 286 IA--RGDL----GMEISPEKVFLAQKLMISKCNLQGKPIITATQMLES-MTKNPRPTRAEVTDVANAVL-DGTDCVMLSG 357 (520)
T ss_dssp EC--HHHH----TTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGG-GGTCSSCCHHHHHHHHHHHH-HTCSEEEESH
T ss_pred Ec--cccc----cccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHH-HhcCCCccHHHHHHHHHHHH-hCCCEEEecc
Confidence 43 2232 222344566666688999999999987521 11110 11123456778888776554 699999994
Q ss_pred cCcCcCCHHHHHHHHHHHHhhCC-CCeE--EE-----E--eCCcc--chHHHHHHHHHHhCCC-EEeeccccC-----CC
Q 015894 269 DTIGVGTPGTVIPMLEAVLDAVP-VDKL--AV-----H--FHDTY--GQALSNILASLQMGIS-TVDSSVSGL-----GG 330 (398)
Q Consensus 269 DT~G~~~P~~v~~lv~~l~~~~p-~~~l--~~-----H--~Hnd~--GlA~ANalaAl~aGa~-~VD~Sv~Gl-----Ge 330 (398)
.|+-.-.|.+..+++..+....- .... .+ + ...+. ..|.|...+|-..+|. +|-.|-.|- ..
T Consensus 358 ETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~vSr 437 (520)
T 3khd_A 358 ETAGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPISVQEAVARSAVETAESIQASLIIALTETGYTARLIAK 437 (520)
T ss_dssp HHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHH
T ss_pred cccCCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHh
Confidence 67778899888887777765431 1000 00 0 01122 3455555667788888 566676663 22
Q ss_pred -CCCCCCCCCCccHHHHHHHHHh-CCCC-----CccChHHHHHHHHHHHHHhCCCCCCCccc
Q 015894 331 -CPYAKGASGNVATEDVVYMLNG-LGVR-----TNVDIRKLMIAGDFICKHLGRTSGSKTAI 385 (398)
Q Consensus 331 -cp~a~graGNa~lE~vv~~L~~-~Gi~-----t~iDl~~L~~~~~~v~~~~g~~~~~~~pi 385 (398)
.|-+|- -.-.+-+.+...|.- .|+. ..-|.+.+.+.+....+..|+--+...-+
T Consensus 438 ~RP~~PI-ia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vV 498 (520)
T 3khd_A 438 YKPSCTI-LALSASDSTVKCLNVHRGVTCIKVGSFQGTDIVIRNAIEIAKQRNMAKVGDSVI 498 (520)
T ss_dssp TCCSSEE-EEEESCHHHHHHGGGSTTEEEEECCSCCCHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred cCCCCCE-EEEcCCHHHHHHHhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEE
Confidence 222221 113444777776664 3553 22355666666666666666654444433
No 415
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=80.63 E-value=21 Score=32.59 Aligned_cols=114 Identities=14% Similarity=0.015 Sum_probs=61.2
Q ss_pred hHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCH-------HH
Q 015894 177 GFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPP-------SK 249 (398)
Q Consensus 177 ~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~-------~~ 249 (398)
-++.+.+.|.+.|-+...- . ...+. +.+.++.+.+++.|+.+............. ..++ +.
T Consensus 22 ~l~~~~~~G~~~vEl~~~~--~-----~~~~~----~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~-~~d~~~r~~~~~~ 89 (294)
T 3vni_A 22 YIEKVAKLGFDILEIAASP--L-----PFYSD----IQINELKACAHGNGITLTVGHGPSAEQNLS-SPDPDIRKNAKAF 89 (294)
T ss_dssp HHHHHHHHTCSEEEEESTT--G-----GGCCH----HHHHHHHHHHHHTTCEEEEEECCCGGGCTT-CSCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEecCcc--c-----CCcCH----HHHHHHHHHHHHcCCeEEEeecCCCCcCCC-CCCHHHHHHHHHH
Confidence 4677888999999887531 0 01121 234456677788999886422111000011 1122 45
Q ss_pred HHHHHHHHHhCCCCEEEE--ccCcC-----cCC-HHHHHHHHHHHHhh---C--CCCeEEEEeCCc
Q 015894 250 VAYVSKQLYDMGCSEISL--GDTIG-----VGT-PGTVIPMLEAVLDA---V--PVDKLAVHFHDT 302 (398)
Q Consensus 250 l~~~a~~l~~~Gad~I~L--~DT~G-----~~~-P~~v~~lv~~l~~~---~--p~~~l~~H~Hnd 302 (398)
+.+.++.+.++|++.|.+ ....| ... ......+++.+++. . -++.|.+|.|+.
T Consensus 90 ~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 155 (294)
T 3vni_A 90 YTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNR 155 (294)
T ss_dssp HHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCT
T ss_pred HHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 666777888889998874 22222 112 23333444333322 1 246799999864
No 416
>3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A*
Probab=80.61 E-value=3.5 Score=42.28 Aligned_cols=83 Identities=8% Similarity=-0.026 Sum_probs=61.3
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC---------CCCC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV---------EGMV 245 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~---------~~r~ 245 (398)
.+|++...++|++.+|+.++=|-++.+- .+.-.++.++.+.++|+.++++|+++.++|.. |..|. ..|-
T Consensus 76 keDi~lm~elG~~~yRfsIsWsRI~P~g-~g~~n~~Gl~~Y~~lid~l~~~GI~P~vTL~H-~dlP~~L~~~yGGW~nr~ 153 (481)
T 3f5l_A 76 KEDVNLMKSLNFDAYRFSISWSRIFPDG-EGRVNQEGVAYYNNLINYLLQKGITPYVNLYH-YDLPLALEKKYGGWLNAK 153 (481)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHCTTS-SSCCCHHHHHHHHHHHHHHHHTTCEEEEESCS-SCCBHHHHHHHCGGGSTT
T ss_pred HHHHHHHHHcCCCEEEecCcHHHhCcCC-CCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CCCCHHHHHHhCCCCCHH
Confidence 4699999999999999998766655432 33445778999999999999999999887765 44441 2344
Q ss_pred CHHHHHHHHHHHHh
Q 015894 246 PPSKVAYVSKQLYD 259 (398)
Q Consensus 246 ~~~~l~~~a~~l~~ 259 (398)
.++.+.++++.+.+
T Consensus 154 ~v~~F~~Ya~~~~~ 167 (481)
T 3f5l_A 154 MADLFTEYADFCFK 167 (481)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 46677777776654
No 417
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=80.53 E-value=41 Score=32.12 Aligned_cols=144 Identities=16% Similarity=0.146 Sum_probs=78.0
Q ss_pred HHHHHHHHHhC-CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCC
Q 015894 215 YRDVALAAREL-SIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVD 293 (398)
Q Consensus 215 ~~~~v~~ak~~-G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~ 293 (398)
+.+.++.+++. +..+.+++... ++ .+.+.++.+.+.|++.|.+. ...|. ++++.+++. ++
T Consensus 65 l~~~i~~i~~~~~~p~gVnl~~~---------~~-~~~~~~~~~~~~g~d~V~l~----~g~p~---~~~~~l~~~--g~ 125 (326)
T 3bo9_A 65 LRKAISELRQKTDKPFGVNIILV---------SP-WADDLVKVCIEEKVPVVTFG----AGNPT---KYIRELKEN--GT 125 (326)
T ss_dssp HHHHHHHHHTTCSSCEEEEEETT---------ST-THHHHHHHHHHTTCSEEEEE----SSCCH---HHHHHHHHT--TC
T ss_pred HHHHHHHHHHhcCCCEEEEEecc---------CC-CHHHHHHHHHHCCCCEEEEC----CCCcH---HHHHHHHHc--CC
Confidence 44556666665 34565555421 11 13456677788999998872 23564 445566553 34
Q ss_pred eEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHHHHHHHh-CCCC----CccC-hHHHHHH
Q 015894 294 KLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNG-LGVR----TNVD-IRKLMIA 367 (398)
Q Consensus 294 ~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~vv~~L~~-~Gi~----t~iD-l~~L~~~ 367 (398)
++..-.++ ...+..+.++|++.|-..=...|+ ..|..+.-+++..+.+ .++. -||. .+.+.++
T Consensus 126 ~v~~~v~s-----~~~a~~a~~~GaD~i~v~g~~~GG------~~G~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~a 194 (326)
T 3bo9_A 126 KVIPVVAS-----DSLARMVERAGADAVIAEGMESGG------HIGEVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAA 194 (326)
T ss_dssp EEEEEESS-----HHHHHHHHHTTCSCEEEECTTSSE------ECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHH
T ss_pred cEEEEcCC-----HHHHHHHHHcCCCEEEEECCCCCc------cCCCccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHH
Confidence 55554443 344567889999977654222344 4554444455544432 2221 1343 3333332
Q ss_pred HHHHHHHhCCCCCCCcccccccccccccCC
Q 015894 368 GDFICKHLGRTSGSKTAIALSKTSTANASK 397 (398)
Q Consensus 368 ~~~v~~~~g~~~~~~~pivG~~~f~~~~s~ 397 (398)
+. .+..-..+|+..+.|.|++
T Consensus 195 ---l~------~GA~gV~vGs~~~~~~e~~ 215 (326)
T 3bo9_A 195 ---FA------LGAEAVQMGTRFVASVESD 215 (326)
T ss_dssp ---HH------HTCSEEEESHHHHTBSSCC
T ss_pred ---HH------hCCCEEEechHHHcCcccc
Confidence 22 2456677777776666654
No 418
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=80.42 E-value=39 Score=31.79 Aligned_cols=76 Identities=14% Similarity=0.067 Sum_probs=35.8
Q ss_pred HHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhC-CCCE--EEEccCcCc-CCHHHHHHHHHHHHhhCCC
Q 015894 217 DVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM-GCSE--ISLGDTIGV-GTPGTVIPMLEAVLDAVPV 292 (398)
Q Consensus 217 ~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~-Gad~--I~L~DT~G~-~~P~~v~~lv~~l~~~~p~ 292 (398)
+.++.|++.|.....-+ .|.-.+.+.+.+.+..+.+.+. +... -.++...|. ++|+.+.++. ..|+
T Consensus 90 ~la~~a~~~Gadavlv~-----~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La-----~~pn 159 (293)
T 1f6k_A 90 ELGKYATELGYDCLSAV-----TPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELY-----KNPK 159 (293)
T ss_dssp HHHHHHHHHTCSEEEEE-----CCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHH-----TSTT
T ss_pred HHHHHHHhcCCCEEEEC-----CCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHh-----cCCC
Confidence 44456666676542111 3443444556555555554442 3332 234555564 4555555542 2455
Q ss_pred CeEEE-EeCCcc
Q 015894 293 DKLAV-HFHDTY 303 (398)
Q Consensus 293 ~~l~~-H~Hnd~ 303 (398)
+ +++ ....|.
T Consensus 160 I-vgiK~s~gd~ 170 (293)
T 1f6k_A 160 V-LGVKFTAGDF 170 (293)
T ss_dssp E-EEEEECSCCH
T ss_pred E-EEEEECCCCH
Confidence 3 555 444443
No 419
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A
Probab=80.40 E-value=4.8 Score=41.25 Aligned_cols=83 Identities=12% Similarity=-0.011 Sum_probs=60.6
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC--------CCCCC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV--------EGMVP 246 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~--------~~r~~ 246 (398)
.+|++...++|++.+|+.++=+.++.+. .+.-.++.++.+.++|+.++++|+++.+++.. |+.|. ..|-.
T Consensus 74 ~eDi~lm~~lG~~~yRfsIsWsRI~P~g-~g~~n~~gl~~Y~~lid~l~~~GI~p~vtL~H-~d~P~~L~~~GGw~~r~~ 151 (479)
T 1gnx_A 74 REDVALMAELGLGAYRFSLAWPRIQPTG-RGPALQKGLDFYRRLADELLAKGIQPVATLYH-WDLPQELENAGGWPERAT 151 (479)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHSGGG-SSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHHTTCTTSTHH
T ss_pred HHHHHHHHHcCCCEEEecccHHHhccCC-CCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CcccHHHHhcCCCCCHHH
Confidence 4689999999999999998766665442 23345788999999999999999999888875 44443 12334
Q ss_pred HHHHHHHHHHHHh
Q 015894 247 PSKVAYVSKQLYD 259 (398)
Q Consensus 247 ~~~l~~~a~~l~~ 259 (398)
.+.+.++++.+.+
T Consensus 152 v~~F~~ya~~~~~ 164 (479)
T 1gnx_A 152 AERFAEYAAIAAD 164 (479)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5566666665554
No 420
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=80.40 E-value=3.7 Score=40.13 Aligned_cols=72 Identities=15% Similarity=0.053 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCCCCEEEEcc-CcCcCCHHH--------HHHHHHHHH-hhCC----CCeEEEEeCCccchHHHHHHHH
Q 015894 248 SKVAYVSKQLYDMGCSEISLGD-TIGVGTPGT--------VIPMLEAVL-DAVP----VDKLAVHFHDTYGQALSNILAS 313 (398)
Q Consensus 248 ~~l~~~a~~l~~~Gad~I~L~D-T~G~~~P~~--------v~~lv~~l~-~~~p----~~~l~~H~Hnd~GlA~ANalaA 313 (398)
+.+.++++...++|++.|.+.| ..|.++|.. +.++++.++ +..| +.++-+|+..+ +.-+. .-
T Consensus 197 ~~~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~-~~~l~---~l 272 (367)
T 1r3s_A 197 DALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG-HFALE---EL 272 (367)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC-GGGHH---HH
T ss_pred HHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc-HHHHH---HH
Q ss_pred HHhCCCEEee
Q 015894 314 LQMGISTVDS 323 (398)
Q Consensus 314 l~aGa~~VD~ 323 (398)
.+.|++.++.
T Consensus 273 ~~~g~d~i~~ 282 (367)
T 1r3s_A 273 AQAGYEVVGL 282 (367)
T ss_dssp TTSSCSEEEC
T ss_pred HhcCCCEEEe
No 421
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=80.39 E-value=19 Score=34.60 Aligned_cols=93 Identities=11% Similarity=-0.014 Sum_probs=63.3
Q ss_pred CCCHHHHHHHHHHHHhcCCC--EEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEE--eCCHhhHHHHHHcC-CCEE
Q 015894 115 IVPAVVKVELIKLLVSSGLA--VVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVL--TPNLKGFEAAVAAG-AKEV 189 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~--~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l--~~n~~~ie~a~~~G-v~~v 189 (398)
.++.++-+++++.|.+.|++ .||--.+ + .|.+ -++.+++..++.+.+= ..+..+++.+++.| +|.|
T Consensus 192 ~~~~~~a~~~~~~l~~~~i~~~~iE~P~~--~------~~~~-~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v 262 (345)
T 2zad_A 192 GYTQKEAVEFARAVYQKGIDIAVYEQPVR--R------EDIE-GLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYV 262 (345)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCSEEECCSC--T------TCHH-HHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCCeeeeeCCCC--c------ccHH-HHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEE
Confidence 47889999999999999999 9994331 1 2333 3444443233433321 23678888888876 6777
Q ss_pred EEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 015894 190 AIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVR 230 (398)
Q Consensus 190 ~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~ 230 (398)
.+=. .+ -.+....++++.|+++|+.+.
T Consensus 263 ~ik~-------------~~-GGit~~~~i~~~A~~~g~~~~ 289 (345)
T 2zad_A 263 NIKL-------------MK-SGISDALAIVEIAESSGLKLM 289 (345)
T ss_dssp EECH-------------HH-HHHHHHHHHHHHHHTTTCEEE
T ss_pred EEec-------------cc-ccHHHHHHHHHHHHHcCCeEE
Confidence 7611 13 457777889999999999875
No 422
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=80.37 E-value=25 Score=34.49 Aligned_cols=120 Identities=14% Similarity=0.061 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC--------------CCC----C---------------CCC-------H
Q 015894 208 IEDSLIRYRDVALAARELSIPVRGYLSCVVGC--------------PVE----G---------------MVP-------P 247 (398)
Q Consensus 208 ~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~--------------~~~----~---------------r~~-------~ 247 (398)
.++.++..+++++.+++.|-.+...|... |- |-. + ..+ .
T Consensus 82 ~d~~i~~~k~l~~avH~~G~~i~~QL~H~-Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~g~~~~~~pr~mt~~eI~~ii 160 (361)
T 3gka_A 82 SPEQVDGWRLVTDAVHAAGGRIFLQLWHV-GRVSDPVFLDGALPVAPSAIAPGGHVSLVRPQRPYVTPRALELDEIPGVV 160 (361)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSCCGGGTTTCCCEESSSCCCSSBCSSCSSCCBCCCCEECCGGGHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCeEEEeeccC-CccccccccCCCCcccCCCCCCCCcccccccccCCCCCccCCHHHHHHHH
Confidence 34677888899999999999887777652 10 000 0 011 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEc-------------------cCcCcC---CHHHHHHHHHHHHhhCCCCeEEEEeCCcc--
Q 015894 248 SKVAYVSKQLYDMGCSEISLG-------------------DTIGVG---TPGTVIPMLEAVLDAVPVDKLAVHFHDTY-- 303 (398)
Q Consensus 248 ~~l~~~a~~l~~~Gad~I~L~-------------------DT~G~~---~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~-- 303 (398)
+.+.+.++.+.++|.|.|-|- |-.|.. .+.-+.++++++|+.++..+|++-.+-+-
T Consensus 161 ~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~ 240 (361)
T 3gka_A 161 AAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDA 240 (361)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCS
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEeccccccc
Confidence 345556777888999988773 333432 23457889999999886337888766431
Q ss_pred -c--------hHHHHHHHHHHhCCCEEeeccccC
Q 015894 304 -G--------QALSNILASLQMGISTVDSSVSGL 328 (398)
Q Consensus 304 -G--------lA~ANalaAl~aGa~~VD~Sv~Gl 328 (398)
| .++.-+...-++|++.|+++-...
T Consensus 241 ~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~ 274 (361)
T 3gka_A 241 HTMGDSDPAATFGHVARELGRRRIAFLFARESFG 274 (361)
T ss_dssp SSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred CCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 1 133334444568999999987553
No 423
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=80.18 E-value=27 Score=33.41 Aligned_cols=76 Identities=8% Similarity=-0.078 Sum_probs=32.3
Q ss_pred HHHHHHHhCCCcEEEEEeeeecCCCCC-C-CCHHHHHHHHHHHHh-CCCCE--EEEccC-cCc-CCHHHHHHHHHHHHhh
Q 015894 217 DVALAARELSIPVRGYLSCVVGCPVEG-M-VPPSKVAYVSKQLYD-MGCSE--ISLGDT-IGV-GTPGTVIPMLEAVLDA 289 (398)
Q Consensus 217 ~~v~~ak~~G~~v~~~l~~~fg~~~~~-r-~~~~~l~~~a~~l~~-~Gad~--I~L~DT-~G~-~~P~~v~~lv~~l~~~ 289 (398)
+.++.|++.|..... . -.|.-. + .+.+.+.+..+.+.+ .+... ..++.. .|. ++|+.+.++ .+.
T Consensus 97 ~la~~a~~~Gadavl--v---~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~L----a~~ 167 (318)
T 3qfe_A 97 EHINDASVAGANYVL--V---LPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTI----ARK 167 (318)
T ss_dssp HHHHHHHHHTCSEEE--E---CCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHH----HHH
T ss_pred HHHHHHHHcCCCEEE--E---eCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHH----Hhh
Confidence 445666666765421 1 133222 1 345555555555544 23332 344443 365 445444333 333
Q ss_pred CCCCeEEE-EeCCc
Q 015894 290 VPVDKLAV-HFHDT 302 (398)
Q Consensus 290 ~p~~~l~~-H~Hnd 302 (398)
.|++ +++ ....|
T Consensus 168 ~pnI-vgiKdssgd 180 (318)
T 3qfe_A 168 NPNV-VGVKLTCAS 180 (318)
T ss_dssp CTTE-EEEEESSCC
T ss_pred CCCE-EEEEeCCCC
Confidence 5653 555 33444
No 424
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=80.00 E-value=4.9 Score=39.79 Aligned_cols=20 Identities=10% Similarity=-0.060 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHH-hCCCcE
Q 015894 210 DSLIRYRDVALAAR-ELSIPV 229 (398)
Q Consensus 210 ~~l~~~~~~v~~ak-~~G~~v 229 (398)
+.++.+.++++.|+ +.|+..
T Consensus 171 ~~i~~f~~AA~~a~~~aGfDg 191 (379)
T 3aty_A 171 GIIPLFVEGAKNAIFKAGFDG 191 (379)
T ss_dssp THHHHHHHHHHHHHHTSCCSE
T ss_pred HHHHHHHHHHHHHHHhcCCCE
Confidence 34556667777788 888863
No 425
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=79.95 E-value=40 Score=31.67 Aligned_cols=77 Identities=9% Similarity=-0.028 Sum_probs=36.5
Q ss_pred HHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhC-CCCEE--EEccCcCc-CCHHHHHHHHHHHHhhCC
Q 015894 216 RDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM-GCSEI--SLGDTIGV-GTPGTVIPMLEAVLDAVP 291 (398)
Q Consensus 216 ~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~-Gad~I--~L~DT~G~-~~P~~v~~lv~~l~~~~p 291 (398)
.+.++.|++.|.....-+ .|.-.+.+.+.+.+..+.+.+. +...+ .++...|. ++|+.+.++. ++.|
T Consensus 85 i~la~~A~~~Gadavlv~-----~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La----~~~p 155 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIV-----SPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIF----EDCP 155 (292)
T ss_dssp HHHHHHHHHTTCSEEEEE-----CCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH----HHCT
T ss_pred HHHHHHHHHcCCCEEEEc-----CCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH----hhCC
Confidence 344566666776542111 3443445566666555555442 33322 34444554 4555555543 2245
Q ss_pred CCeEEE-EeCCc
Q 015894 292 VDKLAV-HFHDT 302 (398)
Q Consensus 292 ~~~l~~-H~Hnd 302 (398)
++ +++ ....|
T Consensus 156 nI-vgiK~s~gd 166 (292)
T 2vc6_A 156 NV-KGVXDATGN 166 (292)
T ss_dssp TE-EEEEECSCC
T ss_pred CE-EEEecCCCC
Confidence 53 455 44444
No 426
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=79.95 E-value=20 Score=32.71 Aligned_cols=110 Identities=9% Similarity=-0.016 Sum_probs=63.9
Q ss_pred hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCH-------H
Q 015894 176 KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPP-------S 248 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~-------~ 248 (398)
+-++.+.+.|.+.|-+...-. . ..+.++.+.+++.|+.+.. +...+.. .-...++ +
T Consensus 42 ~~l~~~~~~G~~~vEl~~~~~------------~---~~~~~~~~~l~~~gl~v~~-~~~~~~~-~l~~~d~~~r~~~~~ 104 (287)
T 3kws_A 42 EKLDFMEKLGVVGFEPGGGGL------------A---GRVNEIKQALNGRNIKVSA-ICAGFKG-FILSTDPAIRKECMD 104 (287)
T ss_dssp HHHHHHHHTTCCEEECBSTTC------------G---GGHHHHHHHHTTSSCEECE-EECCCCS-CTTBSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCch------------H---HHHHHHHHHHHHcCCeEEE-EecCCCC-cCCCCCHHHHHHHHH
Confidence 347788899999999876511 0 2244556777889998752 2211100 0011233 4
Q ss_pred HHHHHHHHHHhCCCCEEEEccCcCc------CCHHHHHHHHHHHHhh---C--CCCeEEEEeCCc
Q 015894 249 KVAYVSKQLYDMGCSEISLGDTIGV------GTPGTVIPMLEAVLDA---V--PVDKLAVHFHDT 302 (398)
Q Consensus 249 ~l~~~a~~l~~~Gad~I~L~DT~G~------~~P~~v~~lv~~l~~~---~--p~~~l~~H~Hnd 302 (398)
.+.+.++.+.++|++.|.+.-..|. ..+.....+++.+++. . -++.|.+|.||.
T Consensus 105 ~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~ 169 (287)
T 3kws_A 105 TMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNR 169 (287)
T ss_dssp HHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCT
T ss_pred HHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 6667788888899999887532222 2333444444443322 1 256899999974
No 427
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=79.86 E-value=6.3 Score=36.12 Aligned_cols=88 Identities=9% Similarity=0.028 Sum_probs=62.1
Q ss_pred HHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeE
Q 015894 216 RDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKL 295 (398)
Q Consensus 216 ~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l 295 (398)
.++.+..++.++... + -..+++...++++++.+.|++.|.+-.. +| ...+.++.+++.+|+..+
T Consensus 17 ~~~~~~l~~~~ii~V------~-----r~~~~~~~~~~~~al~~gGv~~iel~~k----~~-~~~~~i~~l~~~~~~~~i 80 (225)
T 1mxs_A 17 ARIDAICEKARILPV------I-----TIAREEDILPLADALAAGGIRTLEVTLR----SQ-HGLKAIQVLREQRPELCV 80 (225)
T ss_dssp HHHHHHHHHHSEEEE------E-----CCSCGGGHHHHHHHHHHTTCCEEEEESS----ST-HHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHCCEEEE------E-----eCCCHHHHHHHHHHHHHCCCCEEEEecC----Cc-cHHHHHHHHHHhCcccEE
Confidence 344555566675432 1 1136678889999999999999888764 34 345678888999997766
Q ss_pred EEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 296 AVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 296 ~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
+... . +-.-.+-.|+++||+.|++
T Consensus 81 gagt---v-l~~d~~~~A~~aGAd~v~~ 104 (225)
T 1mxs_A 81 GAGT---V-LDRSMFAAVEAAGAQFVVT 104 (225)
T ss_dssp EEEC---C-CSHHHHHHHHHHTCSSEEC
T ss_pred eeCe---E-eeHHHHHHHHHCCCCEEEe
Confidence 6543 2 3337788999999999974
No 428
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=79.70 E-value=14 Score=35.70 Aligned_cols=94 Identities=13% Similarity=0.026 Sum_probs=62.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEE--eCCHhhHHHHHHcC-CCEEEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVL--TPNLKGFEAAVAAG-AKEVAI 191 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l--~~n~~~ie~a~~~G-v~~v~i 191 (398)
.++.++-+++++.|.+.|++.||--.+ + .|.+ -++.+++..++.+.+= +.+..+++.+++.| +|.|.+
T Consensus 198 ~~~~~~a~~~~~~l~~~~i~~iEqP~~--~------~~~~-~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 268 (370)
T 1nu5_A 198 GWDEQTASIWIPRLEEAGVELVEQPVP--R------ANFG-ALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSL 268 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEECCSC--T------TCHH-HHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCCHHHHHHHHHHHHhcCcceEeCCCC--c------ccHH-HHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999999995431 1 2333 3444543223333221 24678899988876 688777
Q ss_pred eccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 015894 192 FASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVR 230 (398)
Q Consensus 192 ~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~ 230 (398)
=.. +--.+....++++.|+++|+.+.
T Consensus 269 k~~-------------~~GGit~~~~i~~~A~~~g~~~~ 294 (370)
T 1nu5_A 269 KLC-------------NMGGIANTLKVAAVAEAAGISSY 294 (370)
T ss_dssp CHH-------------HHTSHHHHHHHHHHHHHHTCEEE
T ss_pred chh-------------hcCCHHHHHHHHHHHHHcCCcEE
Confidence 211 11135666788899999999875
No 429
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=79.67 E-value=41 Score=31.64 Aligned_cols=14 Identities=36% Similarity=0.498 Sum_probs=9.4
Q ss_pred CCCccHHHHHHHHH
Q 015894 338 SGNVATEDVVYMLN 351 (398)
Q Consensus 338 aGNa~lE~vv~~L~ 351 (398)
.+|..-+.++...+
T Consensus 206 ~~n~~P~~~~~l~~ 219 (292)
T 2ojp_A 206 TANVAARDMAQMCK 219 (292)
T ss_dssp GGGTCHHHHHHHHH
T ss_pred HHHhhHHHHHHHHH
Confidence 56777777766654
No 430
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=79.44 E-value=5.8 Score=38.53 Aligned_cols=72 Identities=7% Similarity=0.101 Sum_probs=35.7
Q ss_pred CCHHHHHHHHH-HHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHh------hCCCCeEEEEeCCccchHHHHHHHHHHhC
Q 015894 245 VPPSKVAYVSK-QLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLD------AVPVDKLAVHFHDTYGQALSNILASLQMG 317 (398)
Q Consensus 245 ~~~~~l~~~a~-~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~------~~p~~~l~~H~Hnd~GlA~ANalaAl~aG 317 (398)
.+.+.-+++++ .+.++|++.|-+. .+...|.+ .+.+..+++ .+|+..+.....+.. ..-.|+++|
T Consensus 38 ~~~~~k~~i~~~~L~~~Gv~~IE~g--~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~-----~i~~a~~~g 109 (337)
T 3ble_A 38 FSTSEKLNIAKFLLQKLNVDRVEIA--SARVSKGE-LETVQKIMEWAATEQLTERIEILGFVDGNK-----TVDWIKDSG 109 (337)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEE--ETTSCTTH-HHHHHHHHHHHHHTTCGGGEEEEEESSTTH-----HHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEe--CCCCChhH-HHHHHHHHhhhhhhccCCCCeEEEEccchh-----hHHHHHHCC
Confidence 45566666666 6666666665552 22223422 122333333 344445555555543 344556666
Q ss_pred CCEEeec
Q 015894 318 ISTVDSS 324 (398)
Q Consensus 318 a~~VD~S 324 (398)
++.|...
T Consensus 110 ~~~v~i~ 116 (337)
T 3ble_A 110 AKVLNLL 116 (337)
T ss_dssp CCEEEEE
T ss_pred CCEEEEE
Confidence 6666554
No 431
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=79.41 E-value=27 Score=33.31 Aligned_cols=71 Identities=15% Similarity=0.078 Sum_probs=35.4
Q ss_pred HHHHHHHHhCCC-cEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhC-CCCE--EEEccCcCc-CCHHHHHHHHHHHHhhC
Q 015894 216 RDVALAARELSI-PVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM-GCSE--ISLGDTIGV-GTPGTVIPMLEAVLDAV 290 (398)
Q Consensus 216 ~~~v~~ak~~G~-~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~-Gad~--I~L~DT~G~-~~P~~v~~lv~~l~~~~ 290 (398)
.+.++.|++.|. .... . ..|.-.+.+.+.+.+..+.+.+. +... -.++-..|. ++|+.+.++ .+ .
T Consensus 92 i~la~~A~~~Ga~davl--v---~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L----a~-~ 161 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGL--A---IVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRL----AD-H 161 (311)
T ss_dssp HHHHHHHHHSCCCSEEE--E---ECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHH----HT-S
T ss_pred HHHHHHHHhcCCCcEEE--E---cCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHH----hc-C
Confidence 345567777765 4321 1 13444455666666666666554 4443 234444554 444444433 22 4
Q ss_pred CCCeEEE
Q 015894 291 PVDKLAV 297 (398)
Q Consensus 291 p~~~l~~ 297 (398)
|++ +++
T Consensus 162 pnI-vgi 167 (311)
T 3h5d_A 162 PNI-IGV 167 (311)
T ss_dssp TTE-EEE
T ss_pred CCE-EEE
Confidence 653 555
No 432
>1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4
Probab=79.35 E-value=4.1 Score=41.61 Aligned_cols=84 Identities=8% Similarity=-0.051 Sum_probs=59.3
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC--------CCCCC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV--------EGMVP 246 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~--------~~r~~ 246 (398)
.+|++...++|++.+|+.++=+.++.+..-+.=.++.++.+.++++.++++|+++.+++.. |+.|. ..|-.
T Consensus 62 ~eDi~lm~~~G~~~~R~sisWsRi~P~g~~g~~n~~Gl~~y~~~id~l~~~GI~p~vtL~H-~d~P~~L~~~ggw~~r~~ 140 (464)
T 1wcg_A 62 KEDVAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYH-WDLPQYLQDLGGWVNPIM 140 (464)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHHTTGGGSTTH
T ss_pred HHHHHHHHHhCCCeEEecccHHHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-CCCCcchhhcCCCCChhH
Confidence 4689999999999999998665555432113334678999999999999999999887764 44442 23444
Q ss_pred HHHHHHHHHHHHh
Q 015894 247 PSKVAYVSKQLYD 259 (398)
Q Consensus 247 ~~~l~~~a~~l~~ 259 (398)
.+.+.++++.+.+
T Consensus 141 ~~~f~~ya~~~~~ 153 (464)
T 1wcg_A 141 SDYFKEYARVLFT 153 (464)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5556666665543
No 433
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=79.31 E-value=13 Score=32.81 Aligned_cols=71 Identities=11% Similarity=0.129 Sum_probs=49.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHH---HHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEE
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPG---TVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTV 321 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~---~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~V 321 (398)
.+.+...++++.+. .|+|.|-+.= |. .-.++++.+|+.+|+.+|.+|..-..+.-. -+..+.++|++.|
T Consensus 10 ~~~~~~~~~~~~~~-~~~diie~G~------p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~-~~~~~~~~Gad~v 81 (211)
T 3f4w_A 10 LTLPEAMVFMDKVV-DDVDIIEVGT------PFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHF-ESQLLFDAGADYV 81 (211)
T ss_dssp CCHHHHHHHHHHHG-GGCSEEEECH------HHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHH-HHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHhh-cCccEEEeCc------HHHHhccHHHHHHHHHhCCCCEEEEEEEeccchHH-HHHHHHhcCCCEE
Confidence 46788888888774 5777654321 33 123678889988787888888766555432 2678889999988
Q ss_pred ee
Q 015894 322 DS 323 (398)
Q Consensus 322 D~ 323 (398)
-.
T Consensus 82 ~v 83 (211)
T 3f4w_A 82 TV 83 (211)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 434
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=79.29 E-value=5.5 Score=40.04 Aligned_cols=142 Identities=13% Similarity=0.007 Sum_probs=81.5
Q ss_pred HHHHHcCCCEEEEeccC--------chH--HHhhhcCCCH-HHHHHHHHHHHHHHHhC-------CCcEEEEEeeeecCC
Q 015894 179 EAAVAAGAKEVAIFASA--------SES--FSKSNINCTI-EDSLIRYRDVALAAREL-------SIPVRGYLSCVVGCP 240 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~--------Sd~--~~~~~~~~s~-~~~l~~~~~~v~~ak~~-------G~~v~~~l~~~fg~~ 240 (398)
++|.++|.|.|-|...- |+. +++..+|-+. +.-.+.+.++++.+++. .+.|.+-++..-..+
T Consensus 177 ~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~ 256 (419)
T 3l5a_A 177 LRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRG 256 (419)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEET
T ss_pred HHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccC
Confidence 46678999999986542 232 2333455566 66666667777666653 334544444210001
Q ss_pred CCCCCCHHHHHHHHHHHHh-CCCCEEEEccCcC----cC---C-HHHHHHHHHHHHhhCC-CCeEEEEeC-CccchHHHH
Q 015894 241 VEGMVPPSKVAYVSKQLYD-MGCSEISLGDTIG----VG---T-PGTVIPMLEAVLDAVP-VDKLAVHFH-DTYGQALSN 309 (398)
Q Consensus 241 ~~~r~~~~~l~~~a~~l~~-~Gad~I~L~DT~G----~~---~-P~~v~~lv~~l~~~~p-~~~l~~H~H-nd~GlA~AN 309 (398)
...-.+.+...++++.+.+ +|+|.|.+..... .. . |..-.++++.+++.++ .+||..=+- +| ...
T Consensus 257 ~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t----~e~ 332 (419)
T 3l5a_A 257 SDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINS----PES 332 (419)
T ss_dssp TEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCS----HHH
T ss_pred CCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCC----HHH
Confidence 0002367889999999999 9999999887432 11 1 1112346677777664 345544332 22 345
Q ss_pred HHHHHHhCCCEEeeccccCCC
Q 015894 310 ILASLQMGISTVDSSVSGLGG 330 (398)
Q Consensus 310 alaAl~aGa~~VD~Sv~GlGe 330 (398)
+..+++. ||.| ++|+
T Consensus 333 Ae~~L~~-aDlV-----aiGR 347 (419)
T 3l5a_A 333 ALDALQH-ADMV-----GMSS 347 (419)
T ss_dssp HHHHGGG-CSEE-----EEST
T ss_pred HHHHHHh-CCcH-----HHHH
Confidence 5666766 5544 5665
No 435
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=79.17 E-value=43 Score=34.39 Aligned_cols=253 Identities=15% Similarity=0.120 Sum_probs=142.6
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc-cCCcEEEEeCCHhhH---HHHHHcCCCEEEE
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV-EGARFPVLTPNLKGF---EAAVAAGAKEVAI 191 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~-~~~~l~~l~~n~~~i---e~a~~~Gv~~v~i 191 (398)
++..++..| +.-.+.|+|.|=+.|--++ .|..++.+.+.+. .++.+.+-.-+.+++ +.-++. .|.|.+
T Consensus 190 ltekD~~dl-~~~~~~~vD~i~~sfVr~a------~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~-sDgImV 261 (499)
T 3hqn_D 190 VSAKDRVDL-QFGVEQGVDMIFASFIRSA------EQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIEE-SDGIMV 261 (499)
T ss_dssp SCHHHHHHH-HHHHHTTCSEEEETTCCSH------HHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHHHH-SSEEEE
T ss_pred CCHHHHHHH-HHHHHcCCCEEEecCCCCH------HHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHh-CCcEEE
Confidence 566666666 6777899999988764332 3444444455432 346666666665544 333333 576665
Q ss_pred eccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEE-EeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE-cc
Q 015894 192 FASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGY-LSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL-GD 269 (398)
Q Consensus 192 ~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~-l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L-~D 269 (398)
. -.|.- ..+..++.....+.+++.|+++|..|-+. =+.. +.-...+.+..++-+++..+. -|+|.+-| ..
T Consensus 262 a--RGDLg----vEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLe-SMi~~p~PTRAEvsDVanaV~-dG~DavMLSgE 333 (499)
T 3hqn_D 262 A--RGDLG----VEIPAEKVVVAQKILISKCNVAGKPVICATQMLE-SMTYNPRPTRAEVSDVANAVF-NGADCVMLSGE 333 (499)
T ss_dssp E--HHHHH----HHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSG-GGGTSSSCCHHHHHHHHHHHH-HTCSEEEESHH
T ss_pred c--ccccc----CcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHH-HhccCCCccHHHHHHHHHHHH-cCCcEEEEecc
Confidence 3 22432 22356777777789999999999987521 1110 011123456777788776554 69999999 45
Q ss_pred CcCcCCHHHHHHHHHHHHhhC---CCCeEEE-------EeCCcc--chHHHHHHHHHHhCCC-EEeeccccC-----CC-
Q 015894 270 TIGVGTPGTVIPMLEAVLDAV---PVDKLAV-------HFHDTY--GQALSNILASLQMGIS-TVDSSVSGL-----GG- 330 (398)
Q Consensus 270 T~G~~~P~~v~~lv~~l~~~~---p~~~l~~-------H~Hnd~--GlA~ANalaAl~aGa~-~VD~Sv~Gl-----Ge- 330 (398)
|+-.-.|.+..+++..+.... ..-.-.+ +...+. ..|.|...+|-..+|. +|-.|-.|- ..
T Consensus 334 TA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~isr~ 413 (499)
T 3hqn_D 334 TAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMVVLSNTGRSARLVAKY 413 (499)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhh
Confidence 777788988777777666432 1100000 001122 3445555667788888 666777773 32
Q ss_pred CCCCCCCCCCccHHHHHHHHHh-CCCCCc-c---------ChHHHHHHHHHHHHHhCCCCCCCccc
Q 015894 331 CPYAKGASGNVATEDVVYMLNG-LGVRTN-V---------DIRKLMIAGDFICKHLGRTSGSKTAI 385 (398)
Q Consensus 331 cp~a~graGNa~lE~vv~~L~~-~Gi~t~-i---------Dl~~L~~~~~~v~~~~g~~~~~~~pi 385 (398)
.|-+|- -.-.+-+.+...|.- .|+.+- + |.+.+.+.+....+..|+--+...-+
T Consensus 414 RP~~pI-ia~T~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vV 478 (499)
T 3hqn_D 414 RPNCPI-VCVTTRLQTCRQLNITQGVESVFFDADKLGHDEGKEHRVAAGVEFAKSKGYVQTGDYCV 478 (499)
T ss_dssp CCSSCE-EEEESCHHHHHHGGGSTTEEEEECCHHHHCCCTTCHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CCCCCE-EEEcCCHHHHHHhhccCCeEEEEeccccccccCCHHHHHHHHHHHHHHcCCCCCcCEEE
Confidence 233321 123444777777764 365321 1 44555555555556666544444433
No 436
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4
Probab=79.14 E-value=4.1 Score=41.02 Aligned_cols=82 Identities=13% Similarity=0.071 Sum_probs=57.1
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCC--------CCCCCC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCP--------VEGMVP 246 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~--------~~~r~~ 246 (398)
.+|++...++|++.+|+.++=+.++.+. +.=.++.++.+.++|+.++++|+++.+++.. ++.| ...+..
T Consensus 53 ~eDi~lm~~~G~~~~R~si~W~ri~P~~--g~~n~~gl~~yd~lid~l~~~GI~pivtL~H-~d~P~~l~~~ggw~~~~~ 129 (423)
T 1vff_A 53 RDDIQLMTSLGYNAYRFSIEWSRLFPEE--NKFNEDAFMKYREIIDLLLTRGITPLVTLHH-FTSPLWFMKKGGFLREEN 129 (423)
T ss_dssp HHHHHHHHHHTCCEEEEECCHHHHCSBT--TBCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHHTTGGGSGGG
T ss_pred HHHHHHHHHcCCCEEEeecCHHHhCCCC--CCcCHHHHHHHHHHHHHHHHCCCEEEEEccC-CcccHHHHhcCCCCCHHH
Confidence 4689999999999999988655444332 4445778999999999999999999877763 2222 112333
Q ss_pred HHHHHHHHHHHHh
Q 015894 247 PSKVAYVSKQLYD 259 (398)
Q Consensus 247 ~~~l~~~a~~l~~ 259 (398)
.+.+.++++.+.+
T Consensus 130 ~~~f~~ya~~~~~ 142 (423)
T 1vff_A 130 LKHWEKYIEKVAE 142 (423)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4566666665543
No 437
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=78.87 E-value=22 Score=29.57 Aligned_cols=100 Identities=18% Similarity=0.191 Sum_probs=59.4
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeCCHhhHHHHHHcCCCEEEEeccCchHHHh
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSK 201 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~~ 201 (398)
.-++..|...|++.+..|.+++ .+++ ++.+.+.+++.|.++.....
T Consensus 21 ~~v~~~l~~~G~~Vi~lG~~~p---------~e~~---------------------v~~a~~~~~d~v~lS~~~~~---- 66 (137)
T 1ccw_A 21 KILDHAFTNAGFNVVNIGVLSP---------QELF---------------------IKAAIETKADAILVSSLYGQ---- 66 (137)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEC---------HHHH---------------------HHHHHHHTCSEEEEEECSST----
T ss_pred HHHHHHHHHCCCEEEECCCCCC---------HHHH---------------------HHHHHhcCCCEEEEEecCcC----
Confidence 4466778888999999887543 2333 24556678888888765432
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHhCCC-cEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccC
Q 015894 202 SNINCTIEDSLIRYRDVALAARELSI-PVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDT 270 (398)
Q Consensus 202 ~~~~~s~~~~l~~~~~~v~~ak~~G~-~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT 270 (398)
....+.++++..++.|. .+.+.+ -|.+.. +++.+.+..+.+.++|+|.+.-..|
T Consensus 67 ---------~~~~~~~~i~~l~~~g~~~i~v~v---GG~~~~---~~~~~~~~~~~~~~~G~d~~~~~g~ 121 (137)
T 1ccw_A 67 ---------GEIDCKGLRQKCDEAGLEGILLYV---GGNIVV---GKQHWPDVEKRFKDMGYDRVYAPGT 121 (137)
T ss_dssp ---------HHHHHTTHHHHHHHTTCTTCEEEE---EESCSS---SSCCHHHHHHHHHHTTCSEECCTTC
T ss_pred ---------cHHHHHHHHHHHHhcCCCCCEEEE---ECCCcC---chHhhhhhHHHHHHCCCCEEECCCC
Confidence 23445667777777776 343222 222211 1222333455677899988765444
No 438
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=78.84 E-value=15 Score=34.83 Aligned_cols=60 Identities=10% Similarity=0.019 Sum_probs=30.1
Q ss_pred HHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHhC-CCCE--EEEccCcCc-CCHHHHHH
Q 015894 217 DVALAARELSIPVRGYLSCVVGCPVEGM-VPPSKVAYVSKQLYDM-GCSE--ISLGDTIGV-GTPGTVIP 281 (398)
Q Consensus 217 ~~v~~ak~~G~~v~~~l~~~fg~~~~~r-~~~~~l~~~a~~l~~~-Gad~--I~L~DT~G~-~~P~~v~~ 281 (398)
+.++.|++.|.....-+ .|.-.+ .+.+.+.+..+.+.+. +... -.++...|. ++|+.+.+
T Consensus 82 ~la~~A~~~Gadavlv~-----~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIASY-----APYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp HHHHHGGGSCCSEEEEE-----CCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH
T ss_pred HHHHHHHhcCCCEEEEc-----CCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh
Confidence 44566667776643111 344444 5666666655555443 4333 234445564 45555544
No 439
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=78.72 E-value=29 Score=31.37 Aligned_cols=78 Identities=10% Similarity=0.063 Sum_probs=37.8
Q ss_pred HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCH-------HHH
Q 015894 178 FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPP-------SKV 250 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~-------~~l 250 (398)
++.+.+.|.+.|-+...-... .. + ..+.++.+.+++.|+.+.....+..+....+ .++ +.+
T Consensus 23 l~~~~~~G~~~vEl~~~~~~~-------~~-~---~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~-~d~~~r~~~~~~~ 90 (290)
T 2qul_A 23 AKRIAGLGFDLMEISLGEFHN-------LS-D---AKKRELKAVADDLGLTVMCCIGLKSEYDFAS-PDKSVRDAGTEYV 90 (290)
T ss_dssp HHHHHHTTCSEEEEESTTGGG-------SC-H---HHHHHHHHHHHHHTCEEEEEEEECGGGCTTC-SCHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEecCCccc-------cc-h---hhHHHHHHHHHHcCCceEEecCCCCCCCCCC-CCHHHHHHHHHHH
Confidence 556667777777775431110 01 1 2234455666677777654211100000111 122 455
Q ss_pred HHHHHHHHhCCCCEEEE
Q 015894 251 AYVSKQLYDMGCSEISL 267 (398)
Q Consensus 251 ~~~a~~l~~~Gad~I~L 267 (398)
.+.++.+.++|++.|..
T Consensus 91 ~~~i~~a~~lG~~~v~~ 107 (290)
T 2qul_A 91 KRLLDDCHLLGAPVFAG 107 (290)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEe
Confidence 56666666777776654
No 440
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=78.71 E-value=23 Score=33.79 Aligned_cols=76 Identities=9% Similarity=-0.079 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcC---------------cC-C-H--HHHHHHHHHHHhhCC-CCeEEEEeCCccc
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTIG---------------VG-T-P--GTVIPMLEAVLDAVP-VDKLAVHFHDTYG 304 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~G---------------~~-~-P--~~v~~lv~~l~~~~p-~~~l~~H~Hnd~G 304 (398)
.+.+...++++.+.++|+|.|.+..|.. .. . | ....+++..+++.++ .++|-.=+--..+
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~ 301 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSV 301 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 4567889999999999999999987641 11 1 1 112356666766653 3444443332222
Q ss_pred hHHHHHHHHHHhCCCEEee
Q 015894 305 QALSNILASLQMGISTVDS 323 (398)
Q Consensus 305 lA~ANalaAl~aGa~~VD~ 323 (398)
.-+..++.+||+.|-.
T Consensus 302 ---~da~~~l~~GAd~V~i 317 (336)
T 1f76_A 302 ---IAAREKIAAGASLVQI 317 (336)
T ss_dssp ---HHHHHHHHHTCSEEEE
T ss_pred ---HHHHHHHHCCCCEEEe
Confidence 3344555678887643
No 441
>3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A*
Probab=78.70 E-value=4 Score=41.98 Aligned_cols=83 Identities=10% Similarity=0.025 Sum_probs=60.2
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC------C---CCC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV------E---GMV 245 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~------~---~r~ 245 (398)
.+|++...++|++.+|+.++=|-++.+- .+.-.++.|+.+.++|+.++++|+++.++|.. |..|. . .+-
T Consensus 73 ~eDi~lm~elG~~~yRfsI~WsRI~P~g-~g~~N~~Gl~~Y~~lid~l~~~GI~P~vTL~H-~dlP~~L~~~yGGW~n~~ 150 (488)
T 3gnp_A 73 EEDIQLMADMGMDAYRFSIAWSRIYPNG-VGQVNQAGIDHYNKLIDALLAKGIQPYVTLYH-WDLPQALEDKYKGWLDRQ 150 (488)
T ss_dssp HHHHHHHHHHTCCEEEEECCHHHHCTTS-SSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHHHHCGGGSTH
T ss_pred HHHHHHHHHcCCCEEEecccHHHeeeCC-CCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCC-CCCCHHHHHHhCCCCCHH
Confidence 4699999999999999988766655432 14445789999999999999999999988876 44442 1 233
Q ss_pred CHHHHHHHHHHHHh
Q 015894 246 PPSKVAYVSKQLYD 259 (398)
Q Consensus 246 ~~~~l~~~a~~l~~ 259 (398)
.++.+.++++.+.+
T Consensus 151 ~v~~F~~Ya~~~~~ 164 (488)
T 3gnp_A 151 IVDDFAAYAETCFR 164 (488)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34566666665543
No 442
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=78.64 E-value=29 Score=33.36 Aligned_cols=75 Identities=17% Similarity=0.228 Sum_probs=42.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHH-hCCCEEee
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ-MGISTVDS 323 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~-aGa~~VD~ 323 (398)
.+.+.-+++++.+.++|++.|-+. .-...|.+.. .++.+++..++..+...+-.+.. .+-.++.++. +|++.|..
T Consensus 25 ~~~~~Kl~ia~~L~~~Gv~~IE~g--~p~~~~~d~e-~v~~i~~~~~~~~i~~l~r~~~~-~i~~a~~al~~ag~~~v~i 100 (325)
T 3eeg_A 25 LNTEEKIIVAKALDELGVDVIEAG--FPVSSPGDFN-SVVEITKAVTRPTICALTRAKEA-DINIAGEALRFAKRSRIHT 100 (325)
T ss_dssp CCTTHHHHHHHHHHHHTCSEEEEE--CTTSCHHHHH-HHHHHHHHCCSSEEEEECCSCHH-HHHHHHHHHTTCSSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe--CCCCCHhHHH-HHHHHHHhCCCCEEEEeecCCHH-HHHHHHHhhcccCCCEEEE
Confidence 455667777888888888877764 2234565553 35666666676667666543321 1122222222 27776654
No 443
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=78.54 E-value=5.1 Score=36.24 Aligned_cols=115 Identities=10% Similarity=-0.058 Sum_probs=60.7
Q ss_pred hHHHHHHcCCCEEEEe-ccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEE-EEeeeecCCCCC--CCCHHHHHH
Q 015894 177 GFEAAVAAGAKEVAIF-ASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRG-YLSCVVGCPVEG--MVPPSKVAY 252 (398)
Q Consensus 177 ~ie~a~~~Gv~~v~i~-~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~-~l~~~fg~~~~~--r~~~~~l~~ 252 (398)
-++.+.+.|.+.|.+. .. ..+.. .-. ..+.++.+.+++.|+.+.. +...-++.++.. ....+.+.+
T Consensus 19 ~l~~~~~~G~~~vEl~~~~--~~~~~-~~~-------~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (278)
T 1i60_A 19 DLELCEKHGYDYIEIRTMD--KLPEY-LKD-------HSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKG 88 (278)
T ss_dssp HHHHHHHTTCSEEEEETTT--HHHHH-TTS-------SCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEccHH--HHHHH-hcc-------CCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHH
Confidence 4677888999999887 43 11100 000 1233456677888998752 111111111100 011345666
Q ss_pred HHHHHHhCCCCEEEEccCcCcC----C-HHHHHHHHHHHHh---hC--CCCeEEEEeCCcc
Q 015894 253 VSKQLYDMGCSEISLGDTIGVG----T-PGTVIPMLEAVLD---AV--PVDKLAVHFHDTY 303 (398)
Q Consensus 253 ~a~~l~~~Gad~I~L~DT~G~~----~-P~~v~~lv~~l~~---~~--p~~~l~~H~Hnd~ 303 (398)
.++.+.++|++.|.+. .|.. . ......+++.+++ .. -++.|.+|.|+..
T Consensus 89 ~i~~a~~lG~~~v~~~--~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~ 147 (278)
T 1i60_A 89 MMETCKTLGVKYVVAV--PLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHP 147 (278)
T ss_dssp HHHHHHHHTCCEEEEE--CCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCT
T ss_pred HHHHHHHcCCCEEEEe--cCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCc
Confidence 7777888899988773 2221 2 2333344444332 22 2467888888765
No 444
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=78.53 E-value=17 Score=35.10 Aligned_cols=129 Identities=16% Similarity=0.152 Sum_probs=87.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEE-----ccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHh-C
Q 015894 244 MVPPSKVAYVSKQLYDMGCSEISL-----GDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQM-G 317 (398)
Q Consensus 244 r~~~~~l~~~a~~l~~~Gad~I~L-----~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~a-G 317 (398)
..+|+++++-+.+..++||..+=| .|-.....|..+++++..||+..|. .|.+-+.-..++....=++.+.. .
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~-iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e49_A 28 PVTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTDA-VINLTTGGSPHMTVEERLRPATHYM 106 (311)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCCC-EEEECSCSCTTSCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCc-EEEECCCCCCCCCHHHHHHHHHhcC
Confidence 478899999999999999887533 3556688999999999999998764 56666666666666666666643 5
Q ss_pred CCEEeecccc--CCCCCCCC-------------------C--CCCCccHHHHHHHHHhCCCCCc---cChHHHHHHHHHH
Q 015894 318 ISTVDSSVSG--LGGCPYAK-------------------G--ASGNVATEDVVYMLNGLGVRTN---VDIRKLMIAGDFI 371 (398)
Q Consensus 318 a~~VD~Sv~G--lGecp~a~-------------------g--raGNa~lE~vv~~L~~~Gi~t~---iDl~~L~~~~~~v 371 (398)
-++....++- +|..|.+. . ......+++++..+.+.|+.+. +|...|..+..++
T Consensus 107 Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~n~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~ 186 (311)
T 3e49_A 107 PELASLNMGSMNFGLYPMLERFKEFAHGWEREHLERSRDLVFKNTFADIEFILKTCGGNGTRFEFECYDTSHLYNLAHFV 186 (311)
T ss_dssp CSEEEEECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEECCCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHHHH
T ss_pred CCeeeecCCCcccccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeeEEEEECHHHHHHHHHHH
Confidence 5555333322 33111110 0 0112247888888888898654 7888888887777
Q ss_pred HH
Q 015894 372 CK 373 (398)
Q Consensus 372 ~~ 373 (398)
++
T Consensus 187 ~~ 188 (311)
T 3e49_A 187 DR 188 (311)
T ss_dssp HT
T ss_pred Hc
Confidence 65
No 445
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=78.51 E-value=57 Score=32.59 Aligned_cols=189 Identities=15% Similarity=0.128 Sum_probs=98.7
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc--cCCcEEEEeCCHhhHHH------HHHcCCC
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV--EGARFPVLTPNLKGFEA------AVAAGAK 187 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~--~~~~l~~l~~n~~~ie~------a~~~Gv~ 187 (398)
-+.+..++-+..|.++|.+.+-++.+. +.+++.+....+++ .+..+...+.=..+++. +.+.+++
T Consensus 35 ~Dv~aTv~QI~~L~~aG~eiVRvaVp~-------~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~d 107 (406)
T 4g9p_A 35 RDVEATTAQVLELHRAGSEIVRLTVND-------EEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALD 107 (406)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEECCS-------HHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCS
T ss_pred ccHHHHHHHHHHHHHcCCCEEEEecCC-------HHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHh
Confidence 345555677789999999999998642 23444333222221 23333322221122222 2345889
Q ss_pred EEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC-----------CCCCH--------H
Q 015894 188 EVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE-----------GMVPP--------S 248 (398)
Q Consensus 188 ~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~-----------~r~~~--------~ 248 (398)
.+||=-. |++... +.-+++.++++.|+++|..++..+. +|+-+. ++.+| +
T Consensus 108 kiRINPG--------Nig~~~-k~~e~~~~vv~~ak~~~~pIRIGVN--~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~e 176 (406)
T 4g9p_A 108 KFRINPG--------TLGRGR-HKDEHFAEMIRIAMDLGKPVRIGAN--WGSLDPALLTELMDRNASRPEPKSAHEVVLE 176 (406)
T ss_dssp EEEECTT--------SSCSTH-HHHHHHHHHHHHHHHHTCCEEEEEE--GGGCCHHHHHHHHHHHHHSSSCCCHHHHHHH
T ss_pred hcccCcc--------ccCccc-cHHHHHHHHHHHHHHccCCceeccc--cccccHHHHHHhhcccccCCCccchhhhHHH
Confidence 9998322 454322 2235677899999999999997676 444221 00011 2
Q ss_pred HHHH----HHHHHHhCCC--C--EEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHH-HHHH------
Q 015894 249 KVAY----VSKQLYDMGC--S--EISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSN-ILAS------ 313 (398)
Q Consensus 249 ~l~~----~a~~l~~~Ga--d--~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~AN-alaA------ 313 (398)
-+.+ .++.+.+.|- + .|+++.+ .+..+.+..+.+.+... -|||+=. ---|+...- .-.|
T Consensus 177 amVeSAl~~~~~~~~~~f~~~~iviS~KaS----dv~~~i~aYr~la~~~d-yPLHLGv-TEAG~~~~G~IKSaigiG~L 250 (406)
T 4g9p_A 177 ALVESAVRAYEAALEMGLGEDKLVLSAKVS----KARDLVWVYRELARRTQ-APLHLGL-TEAGMGVKGIVASAAALAPL 250 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEEEEEECS----SHHHHHHHHHHHHHHCC-SCBEECC-TTCBSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCChhheEEEeecC----CHHHHHHHHHHHHHhCC-CCceeee-ecCCCcccceechHHHHHHH
Confidence 2222 2344444554 4 3777776 45554444555555442 2344422 223444332 2222
Q ss_pred HHhCC-CEEeeccccC
Q 015894 314 LQMGI-STVDSSVSGL 328 (398)
Q Consensus 314 l~aGa-~~VD~Sv~Gl 328 (398)
+.-|+ |.|-+|+.+=
T Consensus 251 L~~GIGDTIRVSLT~d 266 (406)
T 4g9p_A 251 LLEGIGDTIRVSLTPS 266 (406)
T ss_dssp HHTTCCSEEECCBCCC
T ss_pred HhccCchhEEeeccCC
Confidence 24565 7888888743
No 446
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=78.30 E-value=21 Score=36.97 Aligned_cols=251 Identities=11% Similarity=0.069 Sum_probs=141.0
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhcc--------CCcEEEEeCCHhhH---HHHHH
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVE--------GARFPVLTPNLKGF---EAAVA 183 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~--------~~~l~~l~~n~~~i---e~a~~ 183 (398)
.++.+++..+++.-.+.|+|+|=+.|--++ .|..++.+.+.+.. ++.+.+=..+.+++ +.-++
T Consensus 212 ~lTekD~~D~l~fa~~~~vD~ialSFVr~~------~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~ 285 (526)
T 4drs_A 212 IIGDKDRHDIVDFALKYNLDFIALSFVQNG------ADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICS 285 (526)
T ss_dssp SSCHHHHHHHHHTTTTTTCSEEEETTCCSH------HHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHH
T ss_pred cccchhHHHHHHHHHHhccCeeeecccCch------hhHHHHHHHHHhhCcccccccccceeeeehhccHHHHHHHHHHh
Confidence 456777888888888999999988764332 34555555555321 23333333455443 33333
Q ss_pred cCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCC
Q 015894 184 AGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCS 263 (398)
Q Consensus 184 ~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad 263 (398)
. .|.|-|.=+ |. ......++...--+.+++.|++.|.+|-+.=-+.-+.-...+.+..++-+++..+. -|+|
T Consensus 286 ~-sDgIMVARG--DL----gvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~-DGaD 357 (526)
T 4drs_A 286 E-SDGIMVARG--DL----GMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVL-DGSD 357 (526)
T ss_dssp H-SSEEEEECT--TH----HHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHH-HTCS
T ss_pred h-ccEEEEECC--cc----cccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHH-hCCc
Confidence 2 356665322 22 12223445555567899999999999853111100011123556778888876554 6999
Q ss_pred EEEEc-cCcCcCCHHHHHHHHHHHHhhC---CCCeEEEE---e-----C-CccchHHHHHHHHHHhCCC-EEeeccccCC
Q 015894 264 EISLG-DTIGVGTPGTVIPMLEAVLDAV---PVDKLAVH---F-----H-DTYGQALSNILASLQMGIS-TVDSSVSGLG 329 (398)
Q Consensus 264 ~I~L~-DT~G~~~P~~v~~lv~~l~~~~---p~~~l~~H---~-----H-nd~GlA~ANalaAl~aGa~-~VD~Sv~GlG 329 (398)
.|-|. .|+-.-.|.+..+.+..+.... ..-+..+| . + -+-..|.|...+|.+.+|. +|-.|-.|.-
T Consensus 358 avMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~sG~t 437 (526)
T 4drs_A 358 CVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSSVPKPVAVPEAIACSAVESAHDVNAKLIITITETGNT 437 (526)
T ss_dssp EEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHH
T ss_pred eEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhhccCCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCcHH
Confidence 99997 6777889988888777766543 11011111 0 0 1133566677777888998 5566666632
Q ss_pred ---------CCCCCCCCCCCccHHHHHHHHHh-CCCC-----CccChHHHHHHHHHHHHHhCCCCCCCc
Q 015894 330 ---------GCPYAKGASGNVATEDVVYMLNG-LGVR-----TNVDIRKLMIAGDFICKHLGRTSGSKT 383 (398)
Q Consensus 330 ---------ecp~a~graGNa~lE~vv~~L~~-~Gi~-----t~iDl~~L~~~~~~v~~~~g~~~~~~~ 383 (398)
.|| - -.-.+-+.+...|.- .|+. ..-+.+.+.+.+.......|+--+...
T Consensus 438 A~~iSr~RP~~p---I-~a~T~~~~~~r~l~L~wGV~p~~~~~~~~~d~~i~~a~~~~~~~g~~~~GD~ 502 (526)
T 4drs_A 438 ARLISKYRPSQT---I-IACTAKPEVARGLKIARGVKTYVLNSIHHSEVVISNALALAKEESLIESGDF 502 (526)
T ss_dssp HHHHHHTCCSSE---E-EEEESCHHHHHHGGGSTTEEEEECSCCCCHHHHHHHHHHHHHHTTSCCTTCE
T ss_pred HHHHHhhCCCCC---E-EEECCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCE
Confidence 123 0 112344666666654 2542 223556666655555555565444433
No 447
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=78.16 E-value=14 Score=36.33 Aligned_cols=94 Identities=14% Similarity=0.134 Sum_probs=62.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEE--eCCHhhHHHHHHcC-CCEEEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVL--TPNLKGFEAAVAAG-AKEVAI 191 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l--~~n~~~ie~a~~~G-v~~v~i 191 (398)
.++.++-+++++.|.+.|+..||--. .+ .|.+ -++.+++..++.+.+= +.+..+++.+++.| +|.|.+
T Consensus 204 ~~~~~~A~~~~~~l~~~~i~~iEqP~--~~------~d~~-~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 274 (383)
T 3i4k_A 204 RWDRRTALHYLPILAEAGVELFEQPT--PA------DDLE-TLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIAL 274 (383)
T ss_dssp CSCHHHHHHHHHHHHHTTCCEEESCS--CT------TCHH-HHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEECCC--Ch------hhHH-HHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEE
Confidence 47889999999999999999999532 21 2333 3444543233433321 24678888888876 788887
Q ss_pred eccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 015894 192 FASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVR 230 (398)
Q Consensus 192 ~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~ 230 (398)
=..- . -.+....++++.|+++|+.+.
T Consensus 275 k~~~--------~-----GGit~~~~ia~~A~~~gi~~~ 300 (383)
T 3i4k_A 275 KTTK--------H-----GGLLESKKIAAIAEAGGLACH 300 (383)
T ss_dssp CTTT--------T-----TSHHHHHHHHHHHHHTTCEEE
T ss_pred cccc--------c-----CCHHHHHHHHHHHHHcCCeEE
Confidence 3221 1 135666788899999999875
No 448
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=78.10 E-value=3.1 Score=37.55 Aligned_cols=152 Identities=16% Similarity=0.173 Sum_probs=83.8
Q ss_pred ccCCCCHHHHHHHHHhccCCcEEEEe----CCHhh-HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHH----
Q 015894 147 VPQLADAKDVMAAIQNVEGARFPVLT----PNLKG-FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRD---- 217 (398)
Q Consensus 147 ~p~~~D~~~v~~~i~~~~~~~l~~l~----~n~~~-ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~---- 217 (398)
+|...|.+++..++.. +.++..+. .+.++ ++...+.| +.+-++...-+ ++.. .+++++.+.+
T Consensus 13 I~Avr~~~~l~~al~s--~~~~ifll~g~i~~l~~~v~~lk~~~-K~v~Vh~Dli~-----Gls~-d~~ai~fL~~~~~p 83 (192)
T 3kts_A 13 IPAAHNQKDMEKILEL--DLTYMVMLETHVAQLKALVKYAQAGG-KKVLLHADLVN-----GLKN-DDYAIDFLCTEICP 83 (192)
T ss_dssp EEEESSSHHHHHHTTS--SCCEEEECSEETTTHHHHHHHHHHTT-CEEEEEGGGEE-----TCCC-SHHHHHHHHHTTCC
T ss_pred EEEecCHHHHHHHHcC--CCCEEEEecCcHHHHHHHHHHHHHcC-CeEEEecCchh-----ccCC-cHHHHHHHHhCCCC
Confidence 4555666665555542 23333332 35544 56666777 45555443221 2222 2445666543
Q ss_pred ---------HHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHh
Q 015894 218 ---------VALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLD 288 (398)
Q Consensus 218 ---------~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~ 288 (398)
+++.||+.|+.+--. .| -.|-.-+....+.+....+|.+.+- |.-+.++++.+++
T Consensus 84 dGIIsTk~~~i~~Ak~~gL~tIqR---~F------liDS~al~~~~~~i~~~~PD~iEiL-------PGi~p~iI~~i~~ 147 (192)
T 3kts_A 84 DGIISTRGNAIMKAKQHKMLAIQR---LF------MIDSSAYNKGVALIQKVQPDCIELL-------PGIIPEQVQKMTQ 147 (192)
T ss_dssp SEEEESCHHHHHHHHHTTCEEEEE---EE------CCSHHHHHHHHHHHHHHCCSEEEEE-------CTTCHHHHHHHHH
T ss_pred CEEEeCcHHHHHHHHHCCCeEEEE---EE------EEEcchHHHHHHHHhhcCCCEEEEC-------CchhHHHHHHHHH
Confidence 678999999975311 12 1233455566777777788877554 3333457777777
Q ss_pred hCCCCeEEEEe-CCccchHHHHHHHHHHhCCCEEeeccccC
Q 015894 289 AVPVDKLAVHF-HDTYGQALSNILASLQMGISTVDSSVSGL 328 (398)
Q Consensus 289 ~~p~~~l~~H~-Hnd~GlA~ANalaAl~aGa~~VD~Sv~Gl 328 (398)
.... ||-.=+ =.| -.-+.+|+++||+.|-+|---|
T Consensus 148 ~~~~-PiIaGGlI~~----~edv~~al~aGA~aVsTs~~~L 183 (192)
T 3kts_A 148 KLHI-PVIAGGLIET----SEQVNQVIASGAIAVTTSNKHL 183 (192)
T ss_dssp HHCC-CEEEESSCCS----HHHHHHHHTTTEEEEEECCGGG
T ss_pred hcCC-CEEEECCcCC----HHHHHHHHHcCCeEEEeCCHHH
Confidence 6532 333211 111 3567788999999998875433
No 449
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=78.05 E-value=32 Score=33.41 Aligned_cols=96 Identities=7% Similarity=-0.104 Sum_probs=64.3
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEE--eCC-HhhHHHHHHcC-CCEEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVL--TPN-LKGFEAAVAAG-AKEVA 190 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l--~~n-~~~ie~a~~~G-v~~v~ 190 (398)
.++.++-+++++.|.+.|++.||--.+ + .|.+ -++.+++..++.+.+= ..+ ..+++.+++.| +|.|.
T Consensus 210 ~~~~~~a~~~~~~l~~~~i~~iE~P~~--~------~~~~-~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ 280 (382)
T 1rvk_A 210 WYSRTDALALGRGLEKLGFDWIEEPMD--E------QSLS-SYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILR 280 (382)
T ss_dssp TCCHHHHHHHHHHHHTTTCSEEECCSC--T------TCHH-HHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEeCCCC--h------hhHH-HHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEe
Confidence 468899999999999999999996432 1 2433 3444553334443331 235 78899988876 68887
Q ss_pred EeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEE
Q 015894 191 IFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGY 232 (398)
Q Consensus 191 i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~ 232 (398)
+=.. +--.+....++++.|+++|+.+.+.
T Consensus 281 ik~~-------------~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 281 TGVN-------------DVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp ECHH-------------HHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred eCch-------------hcCCHHHHHHHHHHHHHcCCeEeec
Confidence 7211 0113566678899999999998754
No 450
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=78.04 E-value=3.6 Score=37.26 Aligned_cols=71 Identities=15% Similarity=0.064 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhCCCCEEEEccCcCcCCHH-HHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeec
Q 015894 249 KVAYVSKQLYDMGCSEISLGDTIGVGTPG-TVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 249 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~-~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
...++++.+.+.|++.|.+.|..|...+. .. ++++.+++... +||.+|.--.. ...+..++++||+.|...
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~-ipv~v~ggi~~---~~~~~~~l~~Gad~V~lg 103 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLD-VQVELSGGIRD---DESLAAALATGCARVNVG 103 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCS-SEEEEESSCCS---HHHHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcC-CcEEEECCCCC---HHHHHHHHHcCCCEEEEC
Confidence 34567778888999999998765544332 22 78888888764 57777754332 234666777898877543
No 451
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=78.00 E-value=28 Score=33.78 Aligned_cols=112 Identities=14% Similarity=0.127 Sum_probs=68.6
Q ss_pred hhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 015894 176 KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSK 255 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~ 255 (398)
..++.+.+.|++.|.+.....+ .+.++.+++.|+.+...+ .+++ .++
T Consensus 113 ~~~~~~~~~g~~~V~~~~g~~~------------------~~~i~~~~~~g~~v~~~v-----------~t~~----~a~ 159 (369)
T 3bw2_A 113 AKLAVLLDDPVPVVSFHFGVPD------------------REVIARLRRAGTLTLVTA-----------TTPE----EAR 159 (369)
T ss_dssp HHHHHHHHSCCSEEEEESSCCC------------------HHHHHHHHHTTCEEEEEE-----------SSHH----HHH
T ss_pred HHHHHHHhcCCCEEEEeCCCCc------------------HHHHHHHHHCCCeEEEEC-----------CCHH----HHH
Confidence 4577888999999988644211 133455667788765321 2343 355
Q ss_pred HHHhCCCCEEEEccC-----cCcCCH--------HHHHHHHHHHHhhCCCCeEEEEeCCccch-HHHHHHHHHHhCCCEE
Q 015894 256 QLYDMGCSEISLGDT-----IGVGTP--------GTVIPMLEAVLDAVPVDKLAVHFHDTYGQ-ALSNILASLQMGISTV 321 (398)
Q Consensus 256 ~l~~~Gad~I~L~DT-----~G~~~P--------~~v~~lv~~l~~~~p~~~l~~H~Hnd~Gl-A~ANalaAl~aGa~~V 321 (398)
.+.+.|+|.|.+--. .|...| ....+++..+++... +||..= -|. -..|+.+++.+||+.|
T Consensus 160 ~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~-iPViaa----GGI~~~~~~~~~l~~GAd~V 234 (369)
T 3bw2_A 160 AVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVD-IPVVAA----GGIMRGGQIAAVLAAGADAA 234 (369)
T ss_dssp HHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCS-SCEEEE----SSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcC-ceEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 677899999988221 232221 234567777777653 344432 244 3477888888999988
Q ss_pred eecc
Q 015894 322 DSSV 325 (398)
Q Consensus 322 D~Sv 325 (398)
...-
T Consensus 235 ~vGs 238 (369)
T 3bw2_A 235 QLGT 238 (369)
T ss_dssp EESH
T ss_pred EECh
Confidence 7653
No 452
>2plj_A Lysine/ornithine decarboxylase; type IV decarboxylase, beta/alpha barrel, beta barrel, lyase; HET: P3T; 1.70A {Vibrio vulnificus} PDB: 2plk_A*
Probab=77.88 E-value=44 Score=32.99 Aligned_cols=82 Identities=24% Similarity=0.427 Sum_probs=43.4
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHH-------HHHHHHHHHhCCC-C--EEEEccCc
Q 015894 202 SNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSK-------VAYVSKQLYDMGC-S--EISLGDTI 271 (398)
Q Consensus 202 ~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~-------l~~~a~~l~~~Ga-d--~I~L~DT~ 271 (398)
.++|.+.+++. ++++.+++.++.+.+ +++=+|+.+. +++. +.++++.+.+.|. + .+.+.-..
T Consensus 185 ~RfG~~~~e~~----~~~~~~~~~~l~l~G-l~~H~gs~~~---~~~~~~~~~~~~~~~~~~l~~~G~~~~~~l~~GGG~ 256 (419)
T 2plj_A 185 KKFGCSPEQAL----VIIETAKEWNIRIKG-LSFHVGSQTT---NPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGF 256 (419)
T ss_dssp CCSCBCHHHHH----HHHHHHHHTTCEEEE-EECCCCTTCC---CTHHHHHHHHHHHHHHHHHHHTTCCCCCEEECCCCC
T ss_pred CCCcCCHHHHH----HHHHHHHhCCCcEEE-EEEECCCCCC---CHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEECCCc
Confidence 46777776654 345566667888875 4433555432 3333 3334555556676 3 44433333
Q ss_pred CcC------CHHHHHHHHHHHHhhCC
Q 015894 272 GVG------TPGTVIPMLEAVLDAVP 291 (398)
Q Consensus 272 G~~------~P~~v~~lv~~l~~~~p 291 (398)
|.. .+....+.++.....+|
T Consensus 257 ~~~y~~~~~~~~~~~~~vr~~i~~y~ 282 (419)
T 2plj_A 257 PVNYTQQVMPIDQFCAPINEALSLLP 282 (419)
T ss_dssp CCCSSSCCCCHHHHHHHHHHHHTTSC
T ss_pred CcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 322 23555666665555565
No 453
>3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii}
Probab=77.80 E-value=3.4 Score=42.16 Aligned_cols=85 Identities=12% Similarity=0.061 Sum_probs=61.6
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC-----C---CCC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVE-----G---MVP 246 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~-----~---r~~ 246 (398)
.+||+...+.|++.+|+.++=|-++.+- .+.-.++.++.+.++|+.+++.|+++.++|.. |..|.. + |-.
T Consensus 69 ~eDi~Lm~elG~~~yRfSIsWsRI~P~g-~g~~N~~Gl~fY~~lid~l~~~GIeP~vTL~H-~dlP~~L~~~GGW~nr~~ 146 (458)
T 3ta9_A 69 REDIELMKEIGIRSYRFSTSWPRILPEG-KGRVNQKGLDFYKRLVDNLLKANIRPMITLYH-WDLPQALQDKGGWTNRDT 146 (458)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHSTTS-SSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHTTTGGGSHHH
T ss_pred HHHHHHHHHcCCCEEEecCcHHHhCcCC-CCCcCHHHHHHHHHHHHHHHHcCCeEEEEecC-CCCCHhHHhcCCCCCHHH
Confidence 4699999999999999988766665442 24445789999999999999999999988876 444431 2 223
Q ss_pred HHHHHHHHHHHHh-CC
Q 015894 247 PSKVAYVSKQLYD-MG 261 (398)
Q Consensus 247 ~~~l~~~a~~l~~-~G 261 (398)
++.++++|+.+.+ +|
T Consensus 147 v~~F~~YA~~~f~~fg 162 (458)
T 3ta9_A 147 AKYFAEYARLMFEEFN 162 (458)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhc
Confidence 3556666665543 44
No 454
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=77.72 E-value=10 Score=37.35 Aligned_cols=122 Identities=14% Similarity=0.153 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCE-EEEccC-----cCcCC------HHHHH
Q 015894 213 IRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSE-ISLGDT-----IGVGT------PGTVI 280 (398)
Q Consensus 213 ~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~-I~L~DT-----~G~~~------P~~v~ 280 (398)
++++++.+.|++.|+-|-+ +. -.+.+.+..+++.+.+.+... |.+.-. .|... ...+.
T Consensus 7 ~~~~~ll~~A~~~~yAV~A-fN---------v~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~~g~~~~~~v~g~~~~a 76 (349)
T 3elf_A 7 EVYAEMLGQAKQNSYAFPA-IN---------CTSSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKDMVTGAVALA 76 (349)
T ss_dssp HHHHHHHHHHHHTTCCEEE-EE---------CCSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHHCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCceEEE-Ee---------eCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhcCcchhhhhhhhHHHHH
Confidence 5677889999999998742 22 135788889999999999875 444421 11111 13445
Q ss_pred HHHHHHHhhCCCCeEEEEe-CCc-cch----------HHHHHHHHHHhCCC--EEeeccccCCCCCCCCCCCCCc-cHHH
Q 015894 281 PMLEAVLDAVPVDKLAVHF-HDT-YGQ----------ALSNILASLQMGIS--TVDSSVSGLGGCPYAKGASGNV-ATED 345 (398)
Q Consensus 281 ~lv~~l~~~~p~~~l~~H~-Hnd-~Gl----------A~ANalaAl~aGa~--~VD~Sv~GlGecp~a~graGNa-~lE~ 345 (398)
.++..+.+.++ +|+.+|. |.. ..+ ......+++++|.+ ++|+|-..+-+ |. -|.+
T Consensus 77 ~~v~~~A~~~~-VPVaLHlDHg~~~~ld~~~~~~l~~~~~~i~~~i~~GFtSVMiDgS~lp~eE---------Ni~~Tk~ 146 (349)
T 3elf_A 77 EFTHVIAAKYP-VNVALHTDHCPKDKLDSYVRPLLAISAQRVSKGGNPLFQSHMWDGSAVPIDE---------NLAIAQE 146 (349)
T ss_dssp HHHHHHHTTSS-SCEEEEECCCCGGGGGGTHHHHHHHHHHHHHTTCCCSCSEEEECCTTSCHHH---------HHHHHHH
T ss_pred HHHHHHHHHCC-CCEEEECCCCCCcccchhhhhhHHHHHHHHHHHhhcCCCEEEecCCCCCHHH---------HHHHHHH
Confidence 66667766666 5788876 322 122 23334444455676 77999988877 65 5667
Q ss_pred HHHHHHhCC
Q 015894 346 VVYMLNGLG 354 (398)
Q Consensus 346 vv~~L~~~G 354 (398)
++...+..|
T Consensus 147 vv~~ah~~g 155 (349)
T 3elf_A 147 LLKAAAAAK 155 (349)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 777776433
No 455
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=77.71 E-value=53 Score=32.22 Aligned_cols=127 Identities=12% Similarity=0.113 Sum_probs=69.3
Q ss_pred HHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHh-ccCCcEEE-EeCCHhhHHHHHHcCCCEEEEeccC---
Q 015894 121 KVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQN-VEGARFPV-LTPNLKGFEAAVAAGAKEVAIFASA--- 195 (398)
Q Consensus 121 k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~-~~~~~l~~-l~~n~~~ie~a~~~Gv~~v~i~~~~--- 195 (398)
..+.++.+.++|++.|++..... .| ....++++.+++ .++..+.+ -+.+.++++.+.++|+|.|.+-...
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g---~~--~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~~ 228 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHG---HS--TRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSI 228 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC---SS--HHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTT
T ss_pred HHHHHHHHHHCCCCEEEEeCCCC---Ch--HHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCcC
Confidence 35567778899999999832111 01 123455555664 34555553 3456788899999999999882110
Q ss_pred chHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 015894 196 SESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLG 268 (398)
Q Consensus 196 Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~ 268 (398)
.......+.+... ++.+..+.+.+++.+++|.+ +.+-.+++.+.+.. ++||+.+.+.
T Consensus 229 ~~~~~~~~~g~p~---~~~l~~v~~~~~~~~ipVia---------~GGI~~~~d~~~al----a~GAd~V~iG 285 (404)
T 1eep_A 229 CTTRIVAGVGVPQ---ITAICDVYEACNNTNICIIA---------DGGIRFSGDVVKAI----AAGADSVMIG 285 (404)
T ss_dssp SHHHHHHCCCCCH---HHHHHHHHHHHTTSSCEEEE---------ESCCCSHHHHHHHH----HHTCSEEEEC
T ss_pred cCccccCCCCcch---HHHHHHHHHHHhhcCceEEE---------ECCCCCHHHHHHHH----HcCCCHHhhC
Confidence 0111112233222 23333344444445666531 23444566655433 4799888775
No 456
>3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A
Probab=77.70 E-value=4.1 Score=41.80 Aligned_cols=92 Identities=13% Similarity=0.026 Sum_probs=64.4
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC------C---CCC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV------E---GMV 245 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~------~---~r~ 245 (398)
.+||+...+.|++..|+.++=|-++.+-.-+.-.++.++.+.++|+.++++|+++.++|.. |..|. . .|-
T Consensus 77 ~eDi~Lm~elG~~~yRfSIsWsRI~P~G~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H-~DlP~~L~~~yGGW~nr~ 155 (481)
T 3qom_A 77 PEDIELFAEMGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAH-FEMPYHLVKQYGGWRNRK 155 (481)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHSSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHHHHCGGGSTH
T ss_pred HHHHHHHHHcCCCEEEecCcHHHcCcCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEEcc-CCCCHHHHhhcCCCCCHH
Confidence 3589999999999999988766665442112335788999999999999999999988876 44442 1 233
Q ss_pred CHHHHHHHHHHHHh-CC--CC-EEEE
Q 015894 246 PPSKVAYVSKQLYD-MG--CS-EISL 267 (398)
Q Consensus 246 ~~~~l~~~a~~l~~-~G--ad-~I~L 267 (398)
.++.+.++|+.+.+ +| ++ ++.+
T Consensus 156 ~v~~F~~YA~~~f~~fgdrVk~W~T~ 181 (481)
T 3qom_A 156 LIQFYLNFAKVCFERYRDKVTYWMTF 181 (481)
T ss_dssp HHHHHHHHHHHHHHHTTTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCcCCEEEEc
Confidence 34566666766543 45 43 4554
No 457
>1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A*
Probab=77.66 E-value=4.5 Score=41.32 Aligned_cols=83 Identities=12% Similarity=0.032 Sum_probs=58.5
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC--------CCCCC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV--------EGMVP 246 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~--------~~r~~ 246 (398)
.+|++...+.|++.+|+.++=+.++.+- -+.-.++.++.+.++++.++++|+++.+++.. |+.|. ..|-.
T Consensus 57 ~eDi~lm~~~G~~~~R~sisWsRi~P~G-~g~~N~~gl~~y~~lid~l~~~GI~p~vtL~H-~d~P~~L~~~ggw~~r~~ 134 (468)
T 1pbg_A 57 PVDLELAEEYGVNGIRISIAWSRIFPTG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHH-FDTPEALHSNGDFLNREN 134 (468)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHSTTS-SSSCCHHHHHHHHHHHHHHHHHTCEEEEEEES-SCCBHHHHHTTGGGSTHH
T ss_pred HHHHHHHHHhCCCEEEeccCHhhhccCC-CCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CccCHHHHhcCCCCChHH
Confidence 4689999999999999998655554431 23335778999999999999999999888875 44442 12333
Q ss_pred HHHHHHHHHHHHh
Q 015894 247 PSKVAYVSKQLYD 259 (398)
Q Consensus 247 ~~~l~~~a~~l~~ 259 (398)
.+.+.++++.+.+
T Consensus 135 ~~~F~~ya~~~~~ 147 (468)
T 1pbg_A 135 IEHFIDYAAFCFE 147 (468)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4555555555543
No 458
>4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A*
Probab=77.48 E-value=4.4 Score=41.11 Aligned_cols=83 Identities=14% Similarity=0.022 Sum_probs=59.8
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC--------CCCCC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV--------EGMVP 246 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~--------~~r~~ 246 (398)
.+|++...++|++.+|+.++=+.++.+. .+.-.++.++.+.++|+.++++|+++.++|.. |..|. ..|-.
T Consensus 61 ~eDi~l~~~lG~~~~R~si~W~Ri~P~g-~g~~N~~gl~~Y~~lid~l~~~GI~p~vtL~H-~dlP~~L~~~GGW~nr~~ 138 (444)
T 4hz8_A 61 EQDLDLMRQLGLKTYRFSIAWARIQPDS-SRQINQRGLDFYRRLVEGLHKRDILPMATLYH-WDLPQWVEDEGGWLSRES 138 (444)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHSCST-TCCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHHTTGGGSTHH
T ss_pred HHHHHHHHhcCCCEEEEeccHHHcCcCC-CCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CCCCHHHhhCcCCCChHH
Confidence 4689999999999999988765554332 23334778999999999999999999988875 44442 12334
Q ss_pred HHHHHHHHHHHHh
Q 015894 247 PSKVAYVSKQLYD 259 (398)
Q Consensus 247 ~~~l~~~a~~l~~ 259 (398)
++.+.++++.+.+
T Consensus 139 v~~F~~Ya~~~~~ 151 (444)
T 4hz8_A 139 ASRFAEYTHALVA 151 (444)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5566666665543
No 459
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=77.39 E-value=34 Score=29.33 Aligned_cols=95 Identities=22% Similarity=0.267 Sum_probs=59.3
Q ss_pred HHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeCCHhhHHHHHHcCCCEEEEeccCchHHH
Q 015894 121 KVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFS 200 (398)
Q Consensus 121 k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~n~~~ie~a~~~Gv~~v~i~~~~Sd~~~ 200 (398)
+.-++..|...|++.+..|..+. .+++. +.+.+.+++.|.+......
T Consensus 35 ~~~va~~l~~~G~eVi~lG~~~p---------~e~lv---------------------~aa~~~~~diV~lS~~~~~--- 81 (161)
T 2yxb_A 35 AKVVARALRDAGFEVVYTGLRQT---------PEQVA---------------------MAAVQEDVDVIGVSILNGA--- 81 (161)
T ss_dssp HHHHHHHHHHTTCEEECCCSBCC---------HHHHH---------------------HHHHHTTCSEEEEEESSSC---
T ss_pred HHHHHHHHHHCCCEEEECCCCCC---------HHHHH---------------------HHHHhcCCCEEEEEeechh---
Confidence 34566778888999998886543 23332 4556678888888765332
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHHhCCC-cEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEEccC
Q 015894 201 KSNINCTIEDSLIRYRDVALAARELSI-PVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDT 270 (398)
Q Consensus 201 ~~~~~~s~~~~l~~~~~~v~~ak~~G~-~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT 270 (398)
.+..+.++++..|+.|. .+.+. +| +....+.+ ..+.+.|+|.++..|+
T Consensus 82 ----------~~~~~~~~i~~L~~~g~~~i~v~----vG----G~~~~~~~----~~l~~~G~d~v~~~~~ 130 (161)
T 2yxb_A 82 ----------HLHLMKRLMAKLRELGADDIPVV----LG----GTIPIPDL----EPLRSLGIREIFLPGT 130 (161)
T ss_dssp ----------HHHHHHHHHHHHHHTTCTTSCEE----EE----ECCCHHHH----HHHHHTTCCEEECTTC
T ss_pred ----------hHHHHHHHHHHHHhcCCCCCEEE----Ee----CCCchhcH----HHHHHCCCcEEECCCC
Confidence 24566777888888875 23211 22 22223322 2466799999887776
No 460
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=77.35 E-value=13 Score=36.42 Aligned_cols=94 Identities=10% Similarity=-0.021 Sum_probs=62.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEE--eCCHhhHHHHHHcC-CCEEEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVL--TPNLKGFEAAVAAG-AKEVAI 191 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l--~~n~~~ie~a~~~G-v~~v~i 191 (398)
.++.++-+++++.|.+.|++.||--.+ + .|. +..+.+++..++.+.+= +.+..+++.+++.| +|.|.+
T Consensus 217 ~~~~~~a~~~~~~l~~~~i~~iE~P~~--~------~~~-~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 287 (393)
T 2og9_A 217 QWDRPTAQRMCRIFEPFNLVWIEEPLD--A------YDH-EGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMP 287 (393)
T ss_dssp CCCHHHHHHHHHHHGGGCCSCEECCSC--T------TCH-HHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCCHHHHHHHHHHHHhhCCCEEECCCC--c------ccH-HHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEee
Confidence 478899999999999999999995321 1 233 33445553333433321 23678899998877 677665
Q ss_pred eccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 015894 192 FASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVR 230 (398)
Q Consensus 192 ~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~ 230 (398)
=.. +--.+....++++.|+++|+.+.
T Consensus 288 k~~-------------~~GGit~~~~i~~~A~~~gi~~~ 313 (393)
T 2og9_A 288 DAP-------------RVGGITPFLKIASLAEHAGLMLA 313 (393)
T ss_dssp CHH-------------HHTSHHHHHHHHHHHHHTTCEEC
T ss_pred Ccc-------------ccCCHHHHHHHHHHHHHcCCEEe
Confidence 111 11136667788999999999875
No 461
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=77.15 E-value=13 Score=33.25 Aligned_cols=72 Identities=18% Similarity=0.158 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhCCCCEEEEccCcCcCC-HHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeec
Q 015894 249 KVAYVSKQLYDMGCSEISLGDTIGVGT-PGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSS 324 (398)
Q Consensus 249 ~l~~~a~~l~~~Gad~I~L~DT~G~~~-P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~S 324 (398)
...++++.+.+.|++.|.+.|..+... .....++++.+++.+. +|+.+|.--.. ...+..++++||+.|...
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~-ipvi~~g~i~~---~~~~~~~~~~Gad~V~i~ 106 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVS-IPVLVGGGVRS---LEDATTLFRAGADKVSVN 106 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCS-SCEEEESSCCS---HHHHHHHHHHTCSEEEES
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcC-CCEEEECCCCC---HHHHHHHHHcCCCEEEEC
Confidence 455677778888888888877665421 2234566777777653 45666542211 234566777888877743
No 462
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ...
Probab=77.09 E-value=6.9 Score=39.93 Aligned_cols=83 Identities=14% Similarity=0.035 Sum_probs=59.7
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC--------CCCCC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV--------EGMVP 246 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~--------~~r~~ 246 (398)
.+|++...++|++.+|+.++=+.++.+ .-+.=.++.++.+.++|+.+++.|+++.+++.. |+.|. ..+..
T Consensus 84 ~eDi~lm~~~G~~~~R~si~W~Ri~P~-G~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H-~d~P~~l~~~ggw~~~~~ 161 (468)
T 2j78_A 84 KEDIEIIEKLGVKAYRFSISWPRILPE-GTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYH-WDLPFALQLKGGWANREI 161 (468)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHSTT-SSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHTTTGGGSTTH
T ss_pred HHHHHHHHHcCCCEEEeccCHHHhCCC-CCCCcCHHHHHHHHHHHHHHHhcCCEEEEEccC-CCCchhhhhcCCCCChHH
Confidence 468999999999999998865554433 133445778999999999999999999887764 33332 22444
Q ss_pred HHHHHHHHHHHHh
Q 015894 247 PSKVAYVSKQLYD 259 (398)
Q Consensus 247 ~~~l~~~a~~l~~ 259 (398)
.+.+.++++.+.+
T Consensus 162 ~~~F~~ya~~~~~ 174 (468)
T 2j78_A 162 ADWFAEYSRVLFE 174 (468)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6667777766654
No 463
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=77.05 E-value=11 Score=36.74 Aligned_cols=86 Identities=20% Similarity=0.221 Sum_probs=57.5
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCEEEE---------ccCcCcC--CHH-HHHHHHHHHHhhCCCCeE---------EEE
Q 015894 240 PVEGMVPPSKVAYVSKQLYDMGCSEISL---------GDTIGVG--TPG-TVIPMLEAVLDAVPVDKL---------AVH 298 (398)
Q Consensus 240 ~~~~r~~~~~l~~~a~~l~~~Gad~I~L---------~DT~G~~--~P~-~v~~lv~~l~~~~p~~~l---------~~H 298 (398)
|.-.|++.+.+.+.++++.+.|+..|.| +|..|.. .|. =+.+-|+.+|+.+|++-| .-|
T Consensus 61 PGv~r~sid~l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~VitDvcLc~YT~H 140 (342)
T 1h7n_A 61 PNINRIGVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCEYTSH 140 (342)
T ss_dssp TTCEEECHHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBTT
T ss_pred CCceeeCHHHHHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccccCC
Confidence 4445778899999999999999876543 3444443 443 377889999999997422 238
Q ss_pred eCCcc----ch---------HHHHHHHHHHhCCCEEeecc
Q 015894 299 FHDTY----GQ---------ALSNILASLQMGISTVDSSV 325 (398)
Q Consensus 299 ~Hnd~----Gl---------A~ANalaAl~aGa~~VD~Sv 325 (398)
+|+-. |- -.-.++.-.+|||++|--|-
T Consensus 141 GHcGil~~~g~V~ND~Tl~~Lak~Als~A~AGAdiVAPSd 180 (342)
T 1h7n_A 141 GHCGVLYDDGTINRERSVSRLAAVAVNYAKAGAHCVAPSD 180 (342)
T ss_dssp CCSSCBCTTSSBCHHHHHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CceeEECCCCcCccHHHHHHHHHHHHHHHHcCCCeeeccc
Confidence 88742 41 11235556689999986554
No 464
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=77.04 E-value=7.7 Score=37.02 Aligned_cols=127 Identities=13% Similarity=0.102 Sum_probs=81.3
Q ss_pred CCCHHHHHHHHHHHHhCCCCEE----EEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCC
Q 015894 244 MVPPSKVAYVSKQLYDMGCSEI----SLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGIS 319 (398)
Q Consensus 244 r~~~~~l~~~a~~l~~~Gad~I----~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~ 319 (398)
..+|+++++-+.+..++||..+ +=.|-.....|..+++++..+|+.-|++.|.+-+.-..+ ...-=++.++..-+
T Consensus 30 PvTpeEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~-~~eeR~~~~~~~Pe 108 (284)
T 3chv_A 30 PITVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSG-AGQARGGMLPLKPD 108 (284)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTC-CGGGGGTTGGGCCS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCC-CHHHHHHhhhcCCC
Confidence 3688999999999999999865 335655677899999999999998888777776643211 11111222223334
Q ss_pred EEeeccccCCCCCCCCC--CCCCccHHHHHHHHHhCCCCCc---cChHHHHHHHHHHHHH
Q 015894 320 TVDSSVSGLGGCPYAKG--ASGNVATEDVVYMLNGLGVRTN---VDIRKLMIAGDFICKH 374 (398)
Q Consensus 320 ~VD~Sv~GlGecp~a~g--raGNa~lE~vv~~L~~~Gi~t~---iDl~~L~~~~~~v~~~ 374 (398)
+....+ |..=|... ......+++++..+++.|+.+. +|...|..+..++++=
T Consensus 109 ~aSl~~---Gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~fd~g~l~~~~~l~~~G 165 (284)
T 3chv_A 109 MASLSV---GSNNFPSRVYENPPDLVDWLAAQMRSYRVTPEIEAFDLSHILRAIDMHGRG 165 (284)
T ss_dssp EEEECC---SCEECSSSEECCCHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHTT
T ss_pred EEEecC---cccccCCccccCCHHHHHHHHHHHHHcCCEEEEEEECHHHHHHHHHHHHcC
Confidence 433222 22111100 1223458888888888888654 7888888887777653
No 465
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=77.00 E-value=35 Score=31.43 Aligned_cols=136 Identities=13% Similarity=0.146 Sum_probs=81.4
Q ss_pred HHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEeeeecCCCCCCCCHHHHHHHHHH
Q 015894 178 FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAAREL-SIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQ 256 (398)
Q Consensus 178 ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~-G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~ 256 (398)
++.+.+.|++-|.+. +.+ + .+. +..+.. ++.+.. +.|.|.. ..+.+....-++.
T Consensus 42 ~~~a~~~~~~aVcv~----p~~------------v-~a~---~~l~~~~~v~v~t----vigFP~G-~~~~~~k~~e~~~ 96 (234)
T 1n7k_A 42 VREASDYGFRCAVLT----PVY------------T-VKI---SGLAEKLGVKLCS----VIGFPLG-QAPLEVKLVEAQT 96 (234)
T ss_dssp HHHHHHHTCSEEEEC----HHH------------H-HHH---HHHHHHHTCCEEE----EESTTTC-CSCHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEc----hHH------------h-eee---hHhCCCCCceEEE----EeCCCCC-CCcHHHHHHHHHH
Confidence 456777899988874 221 1 222 222233 555543 3345643 3455655556788
Q ss_pred HHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCC--CCe----EEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCC
Q 015894 257 LYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVP--VDK----LAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGG 330 (398)
Q Consensus 257 l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p--~~~----l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGe 330 (398)
+.+.|||.|-+.=-.|...- .+.+-+..+++..+ +.+ |+.-..++--. .-.+..|.++|||+|=+|-+ .+.
T Consensus 97 Av~~GAdEID~vinig~~~~-~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i-~~a~ria~eaGADfVKTsTG-~~~ 173 (234)
T 1n7k_A 97 VLEAGATELDVVPHLSLGPE-AVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTL-SLLVDSSRRAGADIVKTSTG-VYT 173 (234)
T ss_dssp HHHHTCCEEEECCCGGGCHH-HHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHH-HHHHHHHHHTTCSEEESCCS-SSC
T ss_pred HHHcCCCEEEEeccchHHHH-HHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHH-HHHHHHHHHhCCCEEEeCCC-CCC
Confidence 88999999988777777766 77777777776531 123 22222333333 34566678999999999863 221
Q ss_pred CCCCCCCCCCccHHHHHH
Q 015894 331 CPYAKGASGNVATEDVVY 348 (398)
Q Consensus 331 cp~a~graGNa~lE~vv~ 348 (398)
+|++..|++-.
T Consensus 174 -------~~gAt~~dv~l 184 (234)
T 1n7k_A 174 -------KGGDPVTVFRL 184 (234)
T ss_dssp -------CCCSHHHHHHH
T ss_pred -------CCCCCHHHHHH
Confidence 25677777655
No 466
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=77.00 E-value=11 Score=35.77 Aligned_cols=54 Identities=17% Similarity=0.191 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCC
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHD 301 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hn 301 (398)
.+.+.-+++++.+.++|++.|-+. .....|.+... ++.+++..++..+...+-+
T Consensus 24 ~~~~~K~~i~~~L~~~Gv~~IE~g--~p~~~~~d~e~-v~~i~~~~~~~~i~~l~~~ 77 (293)
T 3ewb_X 24 FDVKEKIQIALQLEKLGIDVIEAG--FPISSPGDFEC-VKAIAKAIKHCSVTGLARC 77 (293)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEE--CGGGCHHHHHH-HHHHHHHCCSSEEEEEEES
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe--CCCCCccHHHH-HHHHHHhcCCCEEEEEecC
Confidence 455666666777777777666554 23334533332 4555555555556555543
No 467
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=76.94 E-value=25 Score=34.53 Aligned_cols=94 Identities=13% Similarity=0.092 Sum_probs=62.6
Q ss_pred CCCHHHHHHHHHHHHh--cCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE--EeCCHhhHHHHHHcC-CCEE
Q 015894 115 IVPAVVKVELIKLLVS--SGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV--LTPNLKGFEAAVAAG-AKEV 189 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~--aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~--l~~n~~~ie~a~~~G-v~~v 189 (398)
.++.++-+++++.|.+ .|+..||--. .+ .|.+. ++.+++..++.+.+ .+.+..+++.+++.| +|.|
T Consensus 196 ~w~~~~A~~~~~~l~~~~~~l~~iEeP~--~~------~d~~~-~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v 266 (379)
T 3r0u_A 196 GWNLAQTKQFIEEINKYSLNVEIIEQPV--KY------YDIKA-MAEITKFSNIPVVADESVFDAKDAERVIDEQACNMI 266 (379)
T ss_dssp CCCHHHHHHHHHHHHTSCCCEEEEECCS--CT------TCHHH-HHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEE
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEECCC--Cc------ccHHH-HHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEE
Confidence 4789999999999999 8899999532 11 24433 44455333343332 124678898888876 6777
Q ss_pred EEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 015894 190 AIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVR 230 (398)
Q Consensus 190 ~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~ 230 (398)
.+=.. +--.+....++++.|+++|+.+.
T Consensus 267 ~~k~~-------------~~GGi~~~~~ia~~A~~~gi~~~ 294 (379)
T 3r0u_A 267 NIKLA-------------KTGGILEAQKIKKLADSAGISCM 294 (379)
T ss_dssp EECHH-------------HHTSHHHHHHHHHHHHHTTCEEE
T ss_pred EECcc-------------ccCCHHHHHHHHHHHHHcCCEEE
Confidence 76221 11136667788999999999876
No 468
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=76.89 E-value=31 Score=32.81 Aligned_cols=210 Identities=13% Similarity=0.145 Sum_probs=120.1
Q ss_pred HHHHHHhcCCCEEEEecC-CC-CCcccC--CCCHHHHHHHHHhcc-CCcEEEEe--C----CH----hhHHHHHHcCCCE
Q 015894 124 LIKLLVSSGLAVVEATSF-VS-PKWVPQ--LADAKDVMAAIQNVE-GARFPVLT--P----NL----KGFEAAVAAGAKE 188 (398)
Q Consensus 124 ia~~L~~aGv~~IEvG~~-~~-~~~~p~--~~D~~~v~~~i~~~~-~~~l~~l~--~----n~----~~ie~a~~~Gv~~ 188 (398)
-++.++++|++.|=+|.. ++ ....|. .-+.++++..++.+. .+.+.+++ + +. +-+++..++|+.-
T Consensus 27 sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~g 106 (290)
T 2hjp_A 27 VAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNVHYVVPQYEAAGASA 106 (290)
T ss_dssp HHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCCeE
Confidence 456778899999999852 11 122232 235677777777543 23334443 2 22 2345667799999
Q ss_pred EEEeccCchH---HHh--hhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCC
Q 015894 189 VAIFASASES---FSK--SNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCS 263 (398)
Q Consensus 189 v~i~~~~Sd~---~~~--~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad 263 (398)
|+|-..+.+- |.. .+-=.+.++..++++.+++....-++.+.+--- ++ . .....+...+-++.+.++|||
T Consensus 107 v~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtd-a~---~-a~~g~~~ai~Ra~ay~eAGAd 181 (290)
T 2hjp_A 107 IVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVE-AL---I-AGLGQQEAVRRGQAYEEAGAD 181 (290)
T ss_dssp EEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEEC-TT---T-TTCCHHHHHHHHHHHHHTTCS
T ss_pred EEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeeh-Hh---h-ccccHHHHHHHHHHHHHcCCc
Confidence 9998876421 111 011134566777776555543333455542111 00 0 112367788888899999999
Q ss_pred EEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhC-CCEEeeccccCCCCCCCCCCCCCcc
Q 015894 264 EISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMG-ISTVDSSVSGLGGCPYAKGASGNVA 342 (398)
Q Consensus 264 ~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aG-a~~VD~Sv~GlGecp~a~graGNa~ 342 (398)
.|.+.= +.-+++.+.++.+.+...+| +-+-.-.-..+ ..-.--++| +++|-.....+ |+-+.+
T Consensus 182 ~i~~e~--~~~~~~~~~~i~~~~~~~vP---~i~n~~~~~~~---~~~eL~~lG~v~~v~~~~~~~--------raa~~a 245 (290)
T 2hjp_A 182 AILIHS--RQKTPDEILAFVKSWPGKVP---LVLVPTAYPQL---TEADIAALSKVGIVIYGNHAI--------RAAVGA 245 (290)
T ss_dssp EEEECC--CCSSSHHHHHHHHHCCCSSC---EEECGGGCTTS---CHHHHHTCTTEEEEEECSHHH--------HHHHHH
T ss_pred EEEeCC--CCCCHHHHHHHHHHcCCCCC---EEEeccCCCCC---CHHHHHhcCCeeEEEechHHH--------HHHHHH
Confidence 998853 13456777776666543233 43321100122 223444689 99887777666 666888
Q ss_pred HHHHHHHHHhCC
Q 015894 343 TEDVVYMLNGLG 354 (398)
Q Consensus 343 lE~vv~~L~~~G 354 (398)
+++++..+.+.|
T Consensus 246 ~~~~~~~i~~~g 257 (290)
T 2hjp_A 246 VREVFARIRRDG 257 (290)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHcC
Confidence 888888887644
No 469
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=76.85 E-value=17 Score=35.13 Aligned_cols=129 Identities=14% Similarity=0.142 Sum_probs=87.0
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEE-----ccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHh-C
Q 015894 244 MVPPSKVAYVSKQLYDMGCSEISL-----GDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQM-G 317 (398)
Q Consensus 244 r~~~~~l~~~a~~l~~~Gad~I~L-----~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~a-G 317 (398)
..+|+++++-+..+.++||..+=| .|-.....|..+++++..||+..|. .|.+-+.-..++....=++.+.. .
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~-iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e02_A 28 PITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERTDA-ILNITTGGGLGMSLDERLAPARAAR 106 (311)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHCCC-EEEECSSCSTTCCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCc-EEEECCCCCCCCCHHHHHHHHHhcC
Confidence 478899999999999999887533 3566688999999999999998764 56666666666766666666643 5
Q ss_pred CCEEeecccc--CCCCCCCC-------------------C--CCCCccHHHHHHHHHhCCCCCc---cChHHHHHHHHHH
Q 015894 318 ISTVDSSVSG--LGGCPYAK-------------------G--ASGNVATEDVVYMLNGLGVRTN---VDIRKLMIAGDFI 371 (398)
Q Consensus 318 a~~VD~Sv~G--lGecp~a~-------------------g--raGNa~lE~vv~~L~~~Gi~t~---iDl~~L~~~~~~v 371 (398)
-++....++- +|..|.+. . ......+++++..+.+.|+.+. +|...|..+..++
T Consensus 107 Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~ 186 (311)
T 3e02_A 107 PEVASMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGMTELGASGTRFEFECYDVGHLYNLAHFV 186 (311)
T ss_dssp CSEEEEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHHHH
T ss_pred CCeeeecCCCceeccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeEEEEEEcHHHHHHHHHHH
Confidence 5555333222 22111110 0 0112247888888888898654 7888888887777
Q ss_pred HH
Q 015894 372 CK 373 (398)
Q Consensus 372 ~~ 373 (398)
++
T Consensus 187 ~~ 188 (311)
T 3e02_A 187 DR 188 (311)
T ss_dssp HT
T ss_pred Hc
Confidence 65
No 470
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=76.73 E-value=23 Score=33.78 Aligned_cols=61 Identities=8% Similarity=0.114 Sum_probs=28.9
Q ss_pred HHHHHHHhCCCcEEEEEeeeecCCCCCC--CCHHHHHHHHHHHHhC-CCCE--EEEccCcCc-CCHHHHHHH
Q 015894 217 DVALAARELSIPVRGYLSCVVGCPVEGM--VPPSKVAYVSKQLYDM-GCSE--ISLGDTIGV-GTPGTVIPM 282 (398)
Q Consensus 217 ~~v~~ak~~G~~v~~~l~~~fg~~~~~r--~~~~~l~~~a~~l~~~-Gad~--I~L~DT~G~-~~P~~v~~l 282 (398)
+.++.|++.|.....-+ .|.-.+ .+.+.+.+..+.+.+. +... ..++...|. ++|+.+.++
T Consensus 100 ~la~~A~~~Gadavlv~-----~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 166 (307)
T 3s5o_A 100 EMTVSMAQVGADAAMVV-----TPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTL 166 (307)
T ss_dssp HHHHHHHHTTCSEEEEE-----CCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEc-----CCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHH
Confidence 44566667777543111 233322 3556666655555443 3332 344455554 444444443
No 471
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=76.69 E-value=62 Score=32.04 Aligned_cols=131 Identities=17% Similarity=0.167 Sum_probs=82.6
Q ss_pred HHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHH---h-CCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 015894 182 VAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAAR---E-LSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQL 257 (398)
Q Consensus 182 ~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak---~-~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l 257 (398)
...|.|.+..++-.-+. ..+++++-+.+....++++ + +.-.-.. .|| +.-+-..++--.+-++.+
T Consensus 143 ~~lgsDI~m~lDe~~~~------~~~~~~~~~sv~rT~rWa~r~~~~~~~~~~~----lfg-iVQGg~~~dLR~~sa~~l 211 (381)
T 2ash_A 143 IALGSDICMVFDHCPVP------DADYEEVKEATERTYRWALRSKKAFKTENQA----LFG-IVQGGIYPDLRRESALQL 211 (381)
T ss_dssp HHHTCSEEECCCCCCC--------CCHHHHHHHHHHHHHHHHHHHHHCCCSSCE----EEE-EECCTTCHHHHHHHHHHH
T ss_pred HHhCCCEEEECCcCCCC------CCCHHHHHHHHHHHHHHHHHHHHHhhCCCCc----EEE-EEcCCCCHHHHHHHHHHH
Confidence 35688887666443322 2455555555655555553 2 2210000 121 223345566666778899
Q ss_pred HhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCC-CCeEEEEeCCccchHHHHHHHHHHhCCCEEeecccc
Q 015894 258 YDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVP-VDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSG 327 (398)
Q Consensus 258 ~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p-~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~G 327 (398)
.+.+.+.+.|.--...-..+.+.+++..+...+| +.|..+.+= | -..+.+.++..|+|.+|++.--
T Consensus 212 ~~~~~~GyaIGGlsvGe~~~~~~~~l~~~~~~LP~~kPRyLmGv---G-~P~~il~~V~~GvDmFDcv~Pt 278 (381)
T 2ash_A 212 TSIGFDGYAIGGLSIGEERSLTLEMTEVTVEFLPEDKPRYFMGG---G-SPELILELVDRGVDMFDSVFPT 278 (381)
T ss_dssp HTTCCSEEEECSCSSSSCHHHHHHHHHHHHTTSCTTSCEEECSC---C-CHHHHHHHHTTTCCEEEESHHH
T ss_pred HhcCCceEEecCcccCCCHHHHHHHHHHHHhhCCCCCcEEEcCC---C-CHHHHHHHHHcCCCEEeCChhh
Confidence 9999999999874444456789999999999897 556554332 3 2578899999999999987643
No 472
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=76.68 E-value=9 Score=34.74 Aligned_cols=70 Identities=13% Similarity=0.080 Sum_probs=52.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
.+++...++++++.+.|++.|.+-.. +|. ..+.++.+++.+|+..++... . +-.-.+-.|+++||+.|++
T Consensus 25 ~~~~~~~~~~~al~~gGv~~iel~~k----~~~-~~~~i~~l~~~~~~~~vgagt---v-i~~d~~~~A~~aGAd~v~~ 94 (214)
T 1wbh_A 25 KKLEHAVPMAKALVAGGVRVLNVTLR----TEC-AVDAIRAIAKEVPEAIVGAGT---V-LNPQQLAEVTEAGAQFAIS 94 (214)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEESC----STT-HHHHHHHHHHHCTTSEEEEES---C-CSHHHHHHHHHHTCSCEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC----Chh-HHHHHHHHHHHCcCCEEeeCE---E-EEHHHHHHHHHcCCCEEEc
Confidence 46778889999999999999888765 233 356888888889876555532 2 2236788899999999974
No 473
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=76.60 E-value=9.9 Score=37.62 Aligned_cols=94 Identities=11% Similarity=0.020 Sum_probs=62.7
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEE--eCCHhhHHHHHHcCCCEEEEe
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVL--TPNLKGFEAAVAAGAKEVAIF 192 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l--~~n~~~ie~a~~~Gv~~v~i~ 192 (398)
.++.++-+++++.|.+.|+..||--. .+ .|.+ -++.+++..++.+.+= +.+..+++.+++.|+|.|.+=
T Consensus 201 ~~~~~~A~~~~~~L~~~~i~~iEqP~--~~------~d~~-~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~d~v~~k 271 (393)
T 4dwd_A 201 GYSVGGAIRVGRALEDLGYSWFEEPV--QH------YHVG-AMGEVAQRLDITVSAGEQTYTLQALKDLILSGVRMVQPD 271 (393)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEECCS--CT------TCHH-HHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHTCCEECCC
T ss_pred CCCHHHHHHHHHHHHhhCCCEEECCC--Cc------ccHH-HHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCEEEeC
Confidence 47899999999999999999999632 22 2433 3444553333332221 135778888888777777662
Q ss_pred ccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 015894 193 ASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVR 230 (398)
Q Consensus 193 ~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~ 230 (398)
.. +--.+....++++.|+++|+.+.
T Consensus 272 ~~-------------~~GGit~~~~ia~~A~~~gi~~~ 296 (393)
T 4dwd_A 272 IV-------------KMGGITGMMQCAALAHAHGVEFV 296 (393)
T ss_dssp TT-------------TTTHHHHHHHHHHHHHHHTCEEC
T ss_pred cc-------------ccCCHHHHHHHHHHHHHcCCEEe
Confidence 22 11246667788999999999875
No 474
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=76.58 E-value=13 Score=33.78 Aligned_cols=71 Identities=14% Similarity=0.108 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhCCCCEEEEccCcCcCC-HHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 249 KVAYVSKQLYDMGCSEISLGDTIGVGT-PGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 249 ~l~~~a~~l~~~Gad~I~L~DT~G~~~-P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
...++++.+.+.|++.|.+.|..+... .....++++.+++..+ +||.+|+--+. ...+..++++||+.|..
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~-ipvi~~ggI~~---~~~~~~~~~~Gad~V~l 102 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQID-IPFTVGGGIHD---FETASELILRGADKVSI 102 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCC-SCEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCC-CCEEEeCCCCC---HHHHHHHHHcCCCEEEE
Confidence 345667888889999998888776533 2334566777877653 57777754432 24466667788887754
No 475
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=76.52 E-value=7.9 Score=39.64 Aligned_cols=77 Identities=9% Similarity=-0.003 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCC-CeEEEEeCCccchHHHHHHHHHHhCCCEEeecccc
Q 015894 249 KVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPV-DKLAVHFHDTYGQALSNILASLQMGISTVDSSVSG 327 (398)
Q Consensus 249 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~-~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~G 327 (398)
...+.++.+.+.|++.+.+--+-| .+..+.+.++.+++.+|+ .++.+.. ......+..++++|++.|.+++.|
T Consensus 242 ~~~e~~~~l~e~gv~~l~Vd~~~g--~~~~~~~~i~~lk~~~~~~~~Vi~G~----V~t~~~a~~l~~aGad~I~Vg~~~ 315 (503)
T 1me8_A 242 DFRERVPALVEAGADVLCIDSSDG--FSEWQKITIGWIREKYGDKVKVGAGN----IVDGEGFRYLADAGADFIKIGIGG 315 (503)
T ss_dssp SHHHHHHHHHHHTCSEEEECCSCC--CSHHHHHHHHHHHHHHGGGSCEEEEE----ECSHHHHHHHHHHTCSEEEECSSC
T ss_pred hHHHHHHHHHhhhccceEEecccC--cccchhhHHHHHHHhCCCCceEeecc----ccCHHHHHHHHHhCCCeEEecccC
Confidence 344557788888999887744434 445577778999988876 6666432 233456778889999999995544
Q ss_pred CCCC
Q 015894 328 LGGC 331 (398)
Q Consensus 328 lGec 331 (398)
=+.|
T Consensus 316 g~~~ 319 (503)
T 1me8_A 316 GSIC 319 (503)
T ss_dssp STTC
T ss_pred CcCc
Confidence 3334
No 476
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=76.40 E-value=21 Score=34.53 Aligned_cols=129 Identities=7% Similarity=0.014 Sum_probs=81.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEE----c-cCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccch--HHHHHHHHH-H
Q 015894 244 MVPPSKVAYVSKQLYDMGCSEISL----G-DTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQ--ALSNILASL-Q 315 (398)
Q Consensus 244 r~~~~~l~~~a~~l~~~Gad~I~L----~-DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~Gl--A~ANalaAl-~ 315 (398)
..+|+++++-+.++.++||..+=| + |-.....|+.+++++..||+. +++.|-+-+--..++ ...-=++.+ .
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~-~d~iI~~TTgg~~~~~~~~eeR~~~~~~ 106 (314)
T 3lot_A 28 PVTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQ-SDVVINVTTGGGGTLGIPVEERAKVVPA 106 (314)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHH-CCCEEEECSSTTGGGTCCHHHHTTHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhc-CCeEEEeCCCCcCCCCCCHHHHHHHHHh
Confidence 578899999999999999886533 3 455678899999999999987 666666655544445 444444444 3
Q ss_pred hCCCEEeeccc--cCCCCCCC-------------------CC--CCCCccHHHHHHHHHhCCCCCc---cChHHHHHHHH
Q 015894 316 MGISTVDSSVS--GLGGCPYA-------------------KG--ASGNVATEDVVYMLNGLGVRTN---VDIRKLMIAGD 369 (398)
Q Consensus 316 aGa~~VD~Sv~--GlGecp~a-------------------~g--raGNa~lE~vv~~L~~~Gi~t~---iDl~~L~~~~~ 369 (398)
..-++....++ =+|.-|.+ .. ..-...++.++..+++.|+.+. +|...|..+..
T Consensus 107 ~~Pe~aSln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~N~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~ 186 (314)
T 3lot_A 107 LKPEIATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVFRNTFKDLEALSRIFKENDTKPELECYDIGQIYNTAF 186 (314)
T ss_dssp HCCSEEEEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEECCCHHHHHHHHHHHHHHTCEEEEEECSHHHHHHHHH
T ss_pred cCCceeeecCCCcccccccccccccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCEEEEEEECHHHHHHHHH
Confidence 35555433332 22310100 00 0112346677777777888654 78888888887
Q ss_pred HHHH
Q 015894 370 FICK 373 (398)
Q Consensus 370 ~v~~ 373 (398)
++++
T Consensus 187 l~~~ 190 (314)
T 3lot_A 187 MFHE 190 (314)
T ss_dssp HHHT
T ss_pred HHHC
Confidence 7765
No 477
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=76.24 E-value=29 Score=31.87 Aligned_cols=152 Identities=13% Similarity=0.135 Sum_probs=0.0
Q ss_pred CHhhHHHHHHcCC-CEEEEeccCchHHHhhhc--CCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHH
Q 015894 174 NLKGFEAAVAAGA-KEVAIFASASESFSKSNI--NCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKV 250 (398)
Q Consensus 174 n~~~ie~a~~~Gv-~~v~i~~~~Sd~~~~~~~--~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l 250 (398)
|.++++.+.+.|+ +.|. +||....+.. |.+..+.+..+.+.+ ...|.+.+. ..+.+..
T Consensus 9 n~~ei~~~~~~g~i~GVT----TNPsli~k~~~~g~~~~~~~~ei~~~v------~G~Vs~EV~---------a~d~e~m 69 (223)
T 3s1x_A 9 NIDEIRTGVNWGIVDGVT----TNPTLISKEAVNGKKYGDIIREILKIV------DGPVSVEVV---------STKYEGM 69 (223)
T ss_dssp CHHHHHHHHHHTCCCEEE----CCHHHHHHHSCTTCCHHHHHHHHHHHC------SSCEEEECC---------CCSHHHH
T ss_pred CHHHHHHHHhcCCccccc----CCHHHHHhhhccCCCHHHHHHHHHHhC------CCCEEEEEc---------cCCHHHH
Q ss_pred HHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCC
Q 015894 251 AYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGG 330 (398)
Q Consensus 251 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGe 330 (398)
.+-++++.+.+ +.+.++= -++++.+.. ++.|.++ ++|+.-|.=.....+++|.+|||++|.-=++=+-.
T Consensus 70 i~eA~~L~~~~-~nv~IKI---P~T~eGl~A-~~~L~~~------GI~vn~TlifS~~QA~~Aa~AGa~yISPfvgRi~d 138 (223)
T 3s1x_A 70 VEEARKIHGLG-DNAVVKI---PMTEDGLRA-IKTLSSE------HINTNCTLVFNPIQALLAAKAGVTYVSPFVGRLDD 138 (223)
T ss_dssp HHHHHHHHHTC-TTEEEEE---ESSHHHHHH-HHHHHHT------TCCEEEEEECSHHHHHHHHHTTCSEEEEBSHHHHH
T ss_pred HHHHHHHHHhC-CCEEEEe---CCCHHHHHH-HHHHHHC------CCcEEEEEeCCHHHHHHHHHcCCeEEEeecchHhh
Q ss_pred CCCCCCCCCCccHHHHHHHHHhCCCCCcc
Q 015894 331 CPYAKGASGNVATEDVVYMLNGLGVRTNV 359 (398)
Q Consensus 331 cp~a~graGNa~lE~vv~~L~~~Gi~t~i 359 (398)
.|..|...+.++..+++.+|++|.+
T Consensus 139 ----~g~dG~~~v~~i~~~~~~~~~~T~I 163 (223)
T 3s1x_A 139 ----IGEDGMQIIDMIRTIFNNYIIKTQI 163 (223)
T ss_dssp ----TTSCTHHHHHHHHHHHHHTTCCSEE
T ss_pred ----cCCCHHHHHHHHHHHHHHcCCCCEE
No 478
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=76.17 E-value=23 Score=32.65 Aligned_cols=57 Identities=11% Similarity=-0.142 Sum_probs=38.6
Q ss_pred CHhhHHHHH-HcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 015894 174 NLKGFEAAV-AAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYL 233 (398)
Q Consensus 174 n~~~ie~a~-~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l 233 (398)
+.++++..+ +.|+..||+.+.-.+. ...-.+++..++.+.++++.|.++|+.|...+
T Consensus 40 ~~~d~~~l~~~~G~N~vR~~~~~~~~---~~~~~~~~~~~~~ld~~v~~a~~~Gi~vild~ 97 (291)
T 1egz_A 40 TADTVASLKKDWKSSIVRAAMGVQES---GGYLQDPAGNKAKVERVVDAAIANDMYAIIGW 97 (291)
T ss_dssp SHHHHHHHHHTTCCCEEEEEEECSST---TSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEecccccc---CCCcCCHHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 356777777 7899999987653210 01111345678888888999999999886544
No 479
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=76.12 E-value=48 Score=30.49 Aligned_cols=113 Identities=16% Similarity=0.082 Sum_probs=71.6
Q ss_pred hhHHHHHHcCCCEEEEeccCchHHHhhhc-CCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHH
Q 015894 176 KGFEAAVAAGAKEVAIFASASESFSKSNI-NCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVS 254 (398)
Q Consensus 176 ~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~-~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a 254 (398)
+-++.+++.|++.|.+=..-.+.. ..+ .++..+.++.++++.+.+++.|..+. |. + + .
T Consensus 47 ~~~~~al~~Gv~~vqlR~K~~~~~--~~~~~l~~~~~~~~a~~l~~l~~~~~~~li--In------d--~---------~ 105 (243)
T 3o63_A 47 QFAEAALAGGVDIIQLRDKGSPGE--LRFGPLQARDELAACEILADAAHRYGALFA--VN------D--R---------A 105 (243)
T ss_dssp HHHHHHHHTTCSEEEECCTTCHHH--HHHCSCCHHHHHHHHHHHHHHHHHTTCEEE--EE------S--C---------H
T ss_pred HHHHHHHHCCCCEEEEccCCCCcc--ccccCCCHHHHHHHHHHHHHHHHhhCCEEE--Ee------C--H---------H
Confidence 457888999999998854421100 000 13566778888888999999998764 11 1 1 1
Q ss_pred HHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhC-CCCeEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 255 KQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAV-PVDKLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 255 ~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~-p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
+.+.+.|+|.|-|.... +.+.. +|+.+ ++..|++=+|+- .-+..|.+.|+|+|=.
T Consensus 106 ~lA~~~gAdGVHLg~~d--l~~~~-------~r~~~~~~~~iG~S~ht~-----~Ea~~A~~~GaDyI~v 161 (243)
T 3o63_A 106 DIARAAGADVLHLGQRD--LPVNV-------ARQILAPDTLIGRSTHDP-----DQVAAAAAGDADYFCV 161 (243)
T ss_dssp HHHHHHTCSEEEECTTS--SCHHH-------HHHHSCTTCEEEEEECSH-----HHHHHHHHSSCSEEEE
T ss_pred HHHHHhCCCEEEecCCc--CCHHH-------HHHhhCCCCEEEEeCCCH-----HHHHHHhhCCCCEEEE
Confidence 22446799988886542 23333 33434 466788888874 3456778899998864
No 480
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=76.11 E-value=32 Score=35.80 Aligned_cols=131 Identities=18% Similarity=0.109 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHH-hccCCcEEEEe-CCHhhHHHHHHcCCCEEEEeccCc
Q 015894 119 VVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQ-NVEGARFPVLT-PNLKGFEAAVAAGAKEVAIFASAS 196 (398)
Q Consensus 119 ~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~-~~~~~~l~~l~-~n~~~ie~a~~~Gv~~v~i~~~~S 196 (398)
.+-.+-++.|.++|+|.|-+-.-.... .-.-+.++.++ ..|++.+.+=- -+.++.+..+++|+|.|.+-+..-
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ahGhs-----~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpG 354 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQGNS-----VYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSG 354 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSCCCS-----HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCS
T ss_pred ccHHHHHHHHHhcCCcEEEEecccccc-----HHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCCCC
Q ss_pred hHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEEE
Q 015894 197 ESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL 267 (398)
Q Consensus 197 d~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~L 267 (398)
-+-.....---=.-.+..+.++.+++++.|+.|.+ |.+-....++.+.. ++|||.+-+
T Consensus 355 SiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIA---------DGGI~~sGDi~KAl----aaGAd~VMl 412 (556)
T 4af0_A 355 SICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIA---------DGGIGNIGHIAKAL----ALGASAVMM 412 (556)
T ss_dssp TTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEE---------ESCCCSHHHHHHHH----HTTCSEEEE
T ss_pred cccccccccCCCCcHHHHHHHHHHHHHHcCCCEEe---------cCCcCcchHHHHHh----hcCCCEEEE
No 481
>4dde_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: BG6; 1.45A {Streptococcus mutans} PDB: 3pn8_A* 4f66_A* 4gpn_A* 4f79_A*
Probab=76.03 E-value=4.8 Score=41.25 Aligned_cols=93 Identities=13% Similarity=0.018 Sum_probs=65.2
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC------C---CCC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV------E---GMV 245 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~------~---~r~ 245 (398)
.+||+...+.|++..|+.++=|-++.+-.-+.-.++.++.+.++|+.++++|+++.++|.. |..|. . .|-
T Consensus 73 ~eDi~Lm~elG~~~yRfSIsWsRI~P~G~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H-~DlP~~L~~~yGGW~nr~ 151 (480)
T 4dde_A 73 KEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSH-FELPYHLVTEYGGFTNRK 151 (480)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHCSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHHHHCGGGSTH
T ss_pred HHHHHHHHHcCCCEEEecCcHHHcccCCCCCCcCHHHHHHHHHHHHHHHHCCCcceEEeeC-CCCcHHHHHhcCCCCCHH
Confidence 3589999999999999988866665442123335789999999999999999999988876 44442 1 233
Q ss_pred CHHHHHHHHHHHHh-CC--CC-EEEEc
Q 015894 246 PPSKVAYVSKQLYD-MG--CS-EISLG 268 (398)
Q Consensus 246 ~~~~l~~~a~~l~~-~G--ad-~I~L~ 268 (398)
.++.+.++|+.+.+ .| ++ ++.+-
T Consensus 152 ~v~~F~~YA~~~f~~fgdrVk~WiT~N 178 (480)
T 4dde_A 152 VIDFFVHFAEVCFRRYKDKVKYWMTFN 178 (480)
T ss_dssp HHHHHHHHHHHHHHHTTTTCCEEEEET
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEcc
Confidence 34566666766543 45 43 45553
No 482
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=75.96 E-value=63 Score=31.76 Aligned_cols=54 Identities=15% Similarity=0.170 Sum_probs=29.3
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHh-ccCCcEEEEe-C--CHhhHHHHHHcCCCEE
Q 015894 122 VELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQN-VEGARFPVLT-P--NLKGFEAAVAAGAKEV 189 (398)
Q Consensus 122 ~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~-~~~~~l~~l~-~--n~~~ie~a~~~Gv~~v 189 (398)
..+++.|.+.|+ .+++.+ ..|+..+.+. ++..+ ..+. + ...+++.+++.|+..+
T Consensus 71 ~~v~~~l~~~G~-g~~vas------------~~E~~~~~~~G~~~~~-i~~~g~~k~~~~i~~a~~~gv~~i 128 (425)
T 2qgh_A 71 LSILSLLAHLES-GADCVS------------IGEIQRALKAGIKPYR-IVFSGVGKSAFEIEQALKLNILFL 128 (425)
T ss_dssp HHHHHHHHHTTC-EEEESS------------HHHHHHHHHTTCCGGG-EEECCTTCCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCC-eEEEeC------------HHHHHHHHHcCCChhH-EEEcCCCCCHHHHHHHHHCCCCEE
Confidence 567777777776 666643 2344434332 22222 2332 2 2456777777777645
No 483
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=75.92 E-value=14 Score=36.87 Aligned_cols=94 Identities=10% Similarity=-0.002 Sum_probs=64.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEE--eCCHhhHHHHHHcC-CCEEEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVL--TPNLKGFEAAVAAG-AKEVAI 191 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l--~~n~~~ie~a~~~G-v~~v~i 191 (398)
.++.++-+++++.|.+.|+..||--.+ + .|.+ -++.+++..++.+.+= +.+..+++.+++.| +|.|.+
T Consensus 240 ~~~~~~Ai~~~~~Le~~~i~~iEeP~~--~------~d~~-~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~i 310 (412)
T 3stp_A 240 GWNLDYAKRMLPKLAPYEPRWLEEPVI--A------DDVA-GYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQY 310 (412)
T ss_dssp CSCHHHHHHHHHHHGGGCCSEEECCSC--T------TCHH-HHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCCHHHHHHHHHHHHhcCCCEEECCCC--c------ccHH-HHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEec
Confidence 478999999999999999999996332 2 2443 3455554334443331 24678899999876 677765
Q ss_pred eccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 015894 192 FASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVR 230 (398)
Q Consensus 192 ~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~ 230 (398)
=.. +--.+....++++.|+++|+.+.
T Consensus 311 k~~-------------~~GGit~a~kia~~A~a~gi~v~ 336 (412)
T 3stp_A 311 DTN-------------RVGGITAAQKINAIAEAAQIPVI 336 (412)
T ss_dssp CHH-------------HHTHHHHHHHHHHHHHHHTCCBC
T ss_pred Chh-------------hcCCHHHHHHHHHHHHHcCCEEE
Confidence 211 11246777889999999999875
No 484
>2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X*
Probab=75.89 E-value=5.4 Score=40.76 Aligned_cols=61 Identities=8% Similarity=-0.029 Sum_probs=48.2
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEee
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSC 235 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~ 235 (398)
.+|++...++|++.+|+.++=|.++.+..-+.=.++.++.+.++++.++++|+++.+++..
T Consensus 60 ~eDi~lm~~~G~~~~R~sisWsRi~P~g~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H 120 (469)
T 2e9l_A 60 EEDLKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYH 120 (469)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHSTTSSTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEES
T ss_pred HHHHHHHHHhCCCeEEccccHhhcccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 5799999999999999998665555432123334678999999999999999999887764
No 485
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=75.87 E-value=14 Score=38.95 Aligned_cols=136 Identities=9% Similarity=0.106 Sum_probs=79.0
Q ss_pred HHHHHcCCCEEEEeccC---------chH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-C--CcEEEEEeeeecCCCCCC
Q 015894 179 EAAVAAGAKEVAIFASA---------SES--FSKSNINCTIEDSLIRYRDVALAAREL-S--IPVRGYLSCVVGCPVEGM 244 (398)
Q Consensus 179 e~a~~~Gv~~v~i~~~~---------Sd~--~~~~~~~~s~~~~l~~~~~~v~~ak~~-G--~~v~~~l~~~fg~~~~~r 244 (398)
++|.++|.|.|-|...- |+. +....+|-|.+.-.+.+.++++.+|+. | +.|.+-++..- ...+-
T Consensus 163 ~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~--~~~~g 240 (690)
T 3k30_A 163 RRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEE--EIDGG 240 (690)
T ss_dssp HHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCC--CSTTS
T ss_pred HHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccc--cCCCC
Confidence 46678999998884431 111 223345667777777777888887765 4 34554455321 11223
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCc-------CcCC-HHHHHHHHHHHHhhCCCCeEEE-EeCCccchHHHHHHHHHH
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTI-------GVGT-PGTVIPMLEAVLDAVPVDKLAV-HFHDTYGQALSNILASLQ 315 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~-------G~~~-P~~v~~lv~~l~~~~p~~~l~~-H~Hnd~GlA~ANalaAl~ 315 (398)
.+.+...++++.+.+ |+|.|.+.-.. .... +....++++.+++.+.. |+-. -.-++ ...+..+++
T Consensus 241 ~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-pvi~~G~i~~----~~~a~~~l~ 314 (690)
T 3k30_A 241 ITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTK-PVVGVGRFTS----PDAMVRQIK 314 (690)
T ss_dssp CCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSS-CEEECSCCCC----HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCC-eEEEeCCCCC----HHHHHHHHH
Confidence 567888999999987 79987765210 0011 11224667777777643 3333 22222 345667888
Q ss_pred hC-CCEEe
Q 015894 316 MG-ISTVD 322 (398)
Q Consensus 316 aG-a~~VD 322 (398)
.| ||.|-
T Consensus 315 ~g~~d~v~ 322 (690)
T 3k30_A 315 AGILDLIG 322 (690)
T ss_dssp TTSCSEEE
T ss_pred CCCcceEE
Confidence 88 77664
No 486
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A*
Probab=75.71 E-value=4.6 Score=41.08 Aligned_cols=84 Identities=10% Similarity=-0.003 Sum_probs=59.1
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC--------CCCCC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV--------EGMVP 246 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~--------~~r~~ 246 (398)
.+|++...++|++.+|+.++=+.++.+ -+.=.++.|+.+.++++.+++.|+++.+++.. |+.|. ..|-.
T Consensus 70 ~eDi~lm~~~G~~~~R~sisWsRi~P~--~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H-~d~P~~L~~~ggw~~r~~ 146 (454)
T 2o9p_A 70 KEDVQLMKQLGFLHYRFSVAWPRIMPA--AGIINEEGLLFYEHLLDEIELAGLIPMLTLYH-WDLPQWIEDEGGWTQRET 146 (454)
T ss_dssp HHHHHHHHTTTCCEEEEECCHHHHCSS--TTCCCHHHHHHHHHHHHHHHHHTCEEEEEEES-SCCBHHHHHTTGGGSTHH
T ss_pred HHHHHHHHhcCCceEEecccHHhhCCC--CCCcCHHHHHHHHHHHHHHHHCCCEEEEEecC-CCccHHHHhcCCCCCcch
Confidence 468999999999999998865555433 34445678999999999999999999887764 33332 12333
Q ss_pred HHHHHHHHHHHHh-CC
Q 015894 247 PSKVAYVSKQLYD-MG 261 (398)
Q Consensus 247 ~~~l~~~a~~l~~-~G 261 (398)
.+.+.++++.+.+ +|
T Consensus 147 ~~~F~~ya~~~~~~~g 162 (454)
T 2o9p_A 147 IQHFKTYASVIMDRFG 162 (454)
T ss_dssp HHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHhC
Confidence 4556666665543 44
No 487
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=75.61 E-value=23 Score=34.79 Aligned_cols=94 Identities=19% Similarity=0.144 Sum_probs=62.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEE--eCCHhhHHHHHHcC-CCEEEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVL--TPNLKGFEAAVAAG-AKEVAI 191 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l--~~n~~~ie~a~~~G-v~~v~i 191 (398)
.++.++-+++++.|.+.|++.||--.+ + .|. +-++.+++..++.+.+= +.+..+++.+++.| +|.|.+
T Consensus 199 ~~~~~~a~~~~~~l~~~~i~~iEqP~~--~------~~~-~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 269 (397)
T 2qde_A 199 AWTYDQALTTIRALEKYNLSKIEQPLP--A------WDL-DGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMI 269 (397)
T ss_dssp CCCHHHHHHHHHHHGGGCCSCEECCSC--T------TCH-HHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCCHHHHHHHHHHHHhCCCCEEECCCC--h------hhH-HHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 478899999999999999999995431 1 233 33445553333333321 23577888888765 688777
Q ss_pred eccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 015894 192 FASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVR 230 (398)
Q Consensus 192 ~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~ 230 (398)
=.. +--.+....++++.|+++|+.+.
T Consensus 270 k~~-------------~~GGit~~~~i~~~A~~~g~~~~ 295 (397)
T 2qde_A 270 KTQ-------------KAGGLLKAQRWLTLARLANLPVI 295 (397)
T ss_dssp CHH-------------HHTSHHHHHHHHHHHHHHTCCEE
T ss_pred ecc-------------ccCCHHHHHHHHHHHHHcCCeEE
Confidence 211 11135666788999999999876
No 488
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=75.50 E-value=13 Score=35.28 Aligned_cols=125 Identities=11% Similarity=0.154 Sum_probs=80.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCEE----EEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHH-HHhCC
Q 015894 244 MVPPSKVAYVSKQLYDMGCSEI----SLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILAS-LQMGI 318 (398)
Q Consensus 244 r~~~~~l~~~a~~l~~~Gad~I----~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaA-l~aGa 318 (398)
..+|+++++-+.+..++||..+ +=.|-.....|..+++++..+|+..|++.|.+=+.-..+.. .-- +. +...-
T Consensus 26 PvTpeEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~pd~ii~~Ttg~~~~~~-e~R-~~~~~~~P 103 (275)
T 3no5_A 26 PITVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTGGRSGAG-NER-GAMLSLRP 103 (275)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCCCTTCC-GGG-GTTGGGCC
T ss_pred CCCHHHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCH-HHH-hhHhhcCC
Confidence 4788999999999999998764 44665557889999999999999998877766544322220 000 11 22233
Q ss_pred CEEeecccc--CCCCCCCCCCCCCccHHHHHHHHHhCCCCCc---cChHHHHHHHHHHHH
Q 015894 319 STVDSSVSG--LGGCPYAKGASGNVATEDVVYMLNGLGVRTN---VDIRKLMIAGDFICK 373 (398)
Q Consensus 319 ~~VD~Sv~G--lGecp~a~graGNa~lE~vv~~L~~~Gi~t~---iDl~~L~~~~~~v~~ 373 (398)
++....++- +|+=.| .....-+++++..+.+.|+.+. +|...+..+..++++
T Consensus 104 e~aSl~~gs~Nf~~~v~---~N~~~~~~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~~~ 160 (275)
T 3no5_A 104 DMASLATGSVNFPTRVY---DNPPELVDWLAAEMKTYGIKPEVEAFDLSMIFQAAAMQAA 160 (275)
T ss_dssp SEEEEECSCEECSSSEE---CCCHHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHHH
T ss_pred CEEEecCcccccccccc---cCCHHHHHHHHHHHHHcCCeeEEEEEcHHHHHHHHHHHHC
Confidence 444333221 222000 1123567888888888898654 788888888777766
No 489
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=75.50 E-value=4 Score=37.07 Aligned_cols=69 Identities=14% Similarity=0.032 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhCCCCEEEEccCcCcC--CHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 249 KVAYVSKQLYDMGCSEISLGDTIGVG--TPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 249 ~l~~~a~~l~~~Gad~I~L~DT~G~~--~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
...++++.+.+.|++.|.+.|..|.. .+.. ++++.+++... +|+.+|.--.. ...+..++++||+.|..
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~~-ipv~v~ggI~~---~~~~~~~l~~Gad~V~l 103 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQAMD-IKVELSGGIRD---DDTLAAALATGCTRVNL 103 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHHCS-SEEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHhcC-CcEEEECCcCC---HHHHHHHHHcCCCEEEE
Confidence 34566788888999999998755543 2222 77888888764 57877754332 23466677788887654
No 490
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=75.49 E-value=29 Score=30.83 Aligned_cols=112 Identities=11% Similarity=-0.008 Sum_probs=0.0
Q ss_pred CcEEEEeCC------HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC
Q 015894 166 ARFPVLTPN------LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGC 239 (398)
Q Consensus 166 ~~l~~l~~n------~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~ 239 (398)
.++..+++. ..+++.+.+.|++.|++-..--+. +.+.+.++..++.+.... .++..
T Consensus 17 ~~l~~It~~~~~~~~l~~~~~~~~~G~~~v~lr~~~~~~--------------~~~~~~~~~l~~~~~~~~-~l~v~--- 78 (221)
T 1yad_A 17 MELHAITDDSKPVEELARIIITIQNEVDFIHIRERSKSA--------------ADILKLLDLIFEGGIDKR-KLVMN--- 78 (221)
T ss_dssp CEEEEECCSCSCHHHHHHHHHHHGGGCSEEEECCTTSCH--------------HHHHHHHHHHHHTTCCGG-GEEEE---
T ss_pred ccEEEEECCCcCcchHHHHHHHHHCCCCEEEEccCCCCH--------------HHHHHHHHHHHHhcCcCC-eEEEe---
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCC
Q 015894 240 PVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGIS 319 (398)
Q Consensus 240 ~~~~r~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~ 319 (398)
+.++.+.++|+|.|.+....- .++.+++..++..+++-+|+ ...+..|.++|++
T Consensus 79 ------------~~~~~a~~~gad~v~l~~~~~---------~~~~~~~~~~~~~ig~sv~t-----~~~~~~a~~~gaD 132 (221)
T 1yad_A 79 ------------GRVDIALFSTIHRVQLPSGSF---------SPKQIRARFPHLHIGRSVHS-----LEEAVQAEKEDAD 132 (221)
T ss_dssp ------------SCHHHHHTTTCCEEEECTTSC---------CHHHHHHHCTTCEEEEEECS-----HHHHHHHHHTTCS
T ss_pred ------------ChHHHHHHcCCCEEEeCCCcc---------CHHHHHHHCCCCEEEEEcCC-----HHHHHHHHhCCCC
Q ss_pred EE
Q 015894 320 TV 321 (398)
Q Consensus 320 ~V 321 (398)
+|
T Consensus 133 ~i 134 (221)
T 1yad_A 133 YV 134 (221)
T ss_dssp EE
T ss_pred EE
No 491
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=75.46 E-value=30 Score=30.92 Aligned_cols=76 Identities=4% Similarity=-0.082 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCC-HHHHHHHHHHHHhCCCCEEEEccC----cCcCCHHHHHHHH
Q 015894 209 EDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVP-PSKVAYVSKQLYDMGCSEISLGDT----IGVGTPGTVIPML 283 (398)
Q Consensus 209 ~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~-~~~l~~~a~~l~~~Gad~I~L~DT----~G~~~P~~v~~lv 283 (398)
++..+.+++.++.|+++|.+..+.... ...+.....- .+.+.++++.+.++|+. |.+--. .-..++.++.+++
T Consensus 81 ~~~~~~~~~~i~~a~~lG~~~v~~~~g-~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~~E~~~~~~~~~~~~~~~~~l~ 158 (272)
T 2q02_A 81 EEVVKKTEGLLRDAQGVGARALVLCPL-NDGTIVPPEVTVEAIKRLSDLFARYDIQ-GLVEPLGFRVSSLRSAVWAQQLI 158 (272)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCC-CSSBCCCHHHHHHHHHHHHHHHHTTTCE-EEECCCCSTTCSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEccC-CCchhHHHHHHHHHHHHHHHHHHHcCCE-EEEEecCCCcccccCHHHHHHHH
Confidence 445677788888888888875421110 0000000001 34455566666667764 444322 2234667777776
Q ss_pred HHH
Q 015894 284 EAV 286 (398)
Q Consensus 284 ~~l 286 (398)
+.+
T Consensus 159 ~~v 161 (272)
T 2q02_A 159 REA 161 (272)
T ss_dssp HHH
T ss_pred HHh
Confidence 665
No 492
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=75.28 E-value=11 Score=34.47 Aligned_cols=70 Identities=10% Similarity=0.040 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEee
Q 015894 245 VPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDS 323 (398)
Q Consensus 245 ~~~~~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~ 323 (398)
.+++...++++++.+.|++.|.+-.. +| ...+.++.+++.+|+..++... -+ -.-.+-.|+++||+.|.+
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k----~~-~~~~~i~~l~~~~~~l~vgaGt--vl--~~d~~~~A~~aGAd~v~~ 95 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFR----SE-AAADAIRLLRANRPDFLIAAGT--VL--TAEQVVLAKSSGADFVVT 95 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT----ST-THHHHHHHHHHHCTTCEEEEES--CC--SHHHHHHHHHHTCSEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecc----Cc-hHHHHHHHHHHhCcCcEEeeCc--Ee--eHHHHHHHHHCCCCEEEE
Confidence 35678889999999999999888764 33 3356888889999876666543 11 236788899999999954
No 493
>1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4
Probab=75.07 E-value=5.9 Score=40.21 Aligned_cols=83 Identities=11% Similarity=-0.006 Sum_probs=58.6
Q ss_pred HhhHHHHHHcCCCEEEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC--------CCCCC
Q 015894 175 LKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPV--------EGMVP 246 (398)
Q Consensus 175 ~~~ie~a~~~Gv~~v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~--------~~r~~ 246 (398)
.+|++...++|++.+|+.++=+.++.+ .-+.=.++.++.+.++++.++++|+++.+++.. |+.|. ..|-.
T Consensus 61 ~eDi~lm~~~G~~~~R~si~W~ri~P~-G~g~~n~~Gl~~y~~~id~l~~~gI~p~vtL~h-~d~P~~l~~~ggw~~r~~ 138 (449)
T 1qox_A 61 EEDVQLLKDLGVKVYRFSISWPRVLPQ-GTGEVNRAGLDYYHRLVDELLANGIEPFCTLYH-WDLPQALQDQGGWGSRIT 138 (449)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHSTT-SSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHTTTGGGSTHH
T ss_pred HHHHHHHHhcCCCeEEecCcHHHhCcC-CCCCcCHHHHHHHHHHHHHHHHcCCeEEEEeCC-CcccHHHHhcCCCCCchH
Confidence 579999999999999998865555433 133335678999999999999999999887764 33442 12334
Q ss_pred HHHHHHHHHHHHh
Q 015894 247 PSKVAYVSKQLYD 259 (398)
Q Consensus 247 ~~~l~~~a~~l~~ 259 (398)
.+.+.++++.+.+
T Consensus 139 ~~~f~~ya~~~~~ 151 (449)
T 1qox_A 139 IDAFAEYAELMFK 151 (449)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4566666665543
No 494
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=75.07 E-value=51 Score=30.85 Aligned_cols=170 Identities=15% Similarity=0.087 Sum_probs=0.0
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEEeCCHhhHHHHHHcCCC
Q 015894 108 GLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAK 187 (398)
Q Consensus 108 G~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l~~n~~~ie~a~~~Gv~ 187 (398)
|.-.+...++.++|.++++...+ .++.| +|... .+.++.++..+ .|.+.|+|
T Consensus 39 GttGE~~~Ls~~Er~~v~~~~~~-rvpvi-aGvg~--------~~t~~ai~la~------------------~A~~~Gad 90 (283)
T 2pcq_A 39 GSNGEGVHLTPEERARGLRALRP-RKPFL-VGLME--------ETLPQAEGALL------------------EAKAAGAM 90 (283)
T ss_dssp CTTTTGGGSCHHHHHHHHHTCCC-SSCCE-EEECC--------SSHHHHHHHHH------------------HHHHHTCS
T ss_pred CcCcCchhcCHHHHHHHHHHHHh-CCcEE-EeCCC--------CCHHHHHHHHH------------------HHHhcCCC
Q ss_pred EEEEeccCchHHHhhhcCC-CHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEE
Q 015894 188 EVAIFASASESFSKSNINC-TIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEIS 266 (398)
Q Consensus 188 ~v~i~~~~Sd~~~~~~~~~-s~~~~l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~ 266 (398)
.+-+..+ .-..- +.++.++.++.+.+ ++++..|-.-.. -....+++.+.++++. ...+.
T Consensus 91 avlv~~P-------~y~~~~~~~~l~~~f~~va~-----~lPiilYn~P~~---tg~~l~~~~~~~La~~-----pnivg 150 (283)
T 2pcq_A 91 ALLATPP-------RYYHGSLGAGLLRYYEALAE-----KMPLFLYHVPQN---TKVDLPLEAVEALAPH-----PNVLG 150 (283)
T ss_dssp EEEECCC-------CTTGGGTTTHHHHHHHHHHH-----HSCEEEEECHHH---HCCCCCHHHHHHHTTS-----TTEEE
T ss_pred EEEecCC-------cCCCCCCHHHHHHHHHHHhc-----CCCEEEEeCccc---cCcCCCHHHHHHHhcC-----CCEEE
Q ss_pred EccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCCCCCCCCCCCCccHHHH
Q 015894 267 LGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDV 346 (398)
Q Consensus 267 L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGecp~a~graGNa~lE~v 346 (398)
++|+.|- ...+..+++ .++.-.-+-++++. .+.++.+|++.+=+++. |..-+.+
T Consensus 151 iKdssgd------~~~~~~~~~-~~~~f~v~~G~d~~------~~~~l~~G~~G~is~~~-------------n~~P~~~ 204 (283)
T 2pcq_A 151 IKDSSGD------LSRIAFYQA-RLQEFRVYTGHAPT------FLGALALGAEGGILAAA-------------NLAPRAY 204 (283)
T ss_dssp EEECSCC------HHHHHHHHH-HCSSCEEEECCGGG------HHHHHHTTCCEEECGGG-------------GTCHHHH
T ss_pred EEECCCC------HHHHHHHHh-cCCCEEEEECcHHH------HHHHHHcCCCEEEeCHH-------------HhCHHHH
Q ss_pred HHHHH
Q 015894 347 VYMLN 351 (398)
Q Consensus 347 v~~L~ 351 (398)
+...+
T Consensus 205 ~~l~~ 209 (283)
T 2pcq_A 205 RALLD 209 (283)
T ss_dssp HHHHH
T ss_pred HHHHH
No 495
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=75.04 E-value=46 Score=29.78 Aligned_cols=194 Identities=18% Similarity=0.060 Sum_probs=103.8
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc--cCCcEEEEeC-CH----hhHHHHHHcCCCE
Q 015894 116 VPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV--EGARFPVLTP-NL----KGFEAAVAAGAKE 188 (398)
Q Consensus 116 ~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~--~~~~l~~l~~-n~----~~ie~a~~~Gv~~ 188 (398)
|-......+-+.+.+.|+..+-.... .|.+...+.++.+ .++.-..+.+ .. .-++.+.+.|+..
T Consensus 22 ~~~~~~~gi~~~a~~~g~~~~~~~~~---------~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPv 92 (293)
T 3l6u_A 22 FAQRLINAFKAEAKANKYEALVATSQ---------NSRISEREQILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGIPV 92 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECS---------SCHHHHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHHHcCCEEEEECCC---------CCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCCCE
Confidence 44555566777888899877655432 1333333333322 2333223332 11 4467777889888
Q ss_pred EEEeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHh-C-CCc----EEEEEeeeecCCCCCCCCHHHHHHHHHHHHhC-C
Q 015894 189 VAIFASASESFSKSNINCTIEDSLIRYRDVALAARE-L-SIP----VRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM-G 261 (398)
Q Consensus 189 v~i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~-~-G~~----v~~~l~~~fg~~~~~r~~~~~l~~~a~~l~~~-G 261 (398)
|.+-....+...-.....+..++- ..++++..+ + |.. -+ +.+..|.+ ......+.+.-+.+.+.+. |
T Consensus 93 V~~~~~~~~~~~~~~V~~D~~~~g---~~~~~~l~~~~~g~~~~~~~~--i~~i~g~~-~~~~~~~R~~gf~~~l~~~~g 166 (293)
T 3l6u_A 93 FAIDRMIRSDAVVSSITSNNQMIG---EQLASYIKNELIKQTGRSTGR--IVEITGTA-NVYTTNERHRGFLKGIENEPT 166 (293)
T ss_dssp EEESSCCCCTTCSEEEEECHHHHH---HHHHHHHHHHHHHHHSCSCEE--EEEEECST-TCHHHHHHHHHHHHHHTTCTT
T ss_pred EEecCCCCCCcceeEEecCHHHHH---HHHHHHHHHHhccCCCCCCce--EEEEECCC-CCchHHHHHHHHHHHHHhCCC
Confidence 777433322100112233444433 344455444 2 433 12 22222222 2222334555566667777 7
Q ss_pred CCEEEEccCcCcCCHHHHHHHHHHHHhhCCCCeEEEEeCCccchHHHHHHHHHHhCCCEEeeccccCCC
Q 015894 262 CSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGG 330 (398)
Q Consensus 262 ad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~l~~H~Hnd~GlA~ANalaAl~aGa~~VD~Sv~GlGe 330 (398)
...... -.+...+...++.+..+.+..|.. =.+=+.|| .+|++-.-++-++|.+ |.+|.|++.
T Consensus 167 ~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~-~ai~~~~d-~~a~g~~~al~~~g~~--di~vig~d~ 229 (293)
T 3l6u_A 167 LSIVDS--VSGNYDPVTSERVMRQVIDSGIPF-DAVYCHND-DIAMGVLEALKKAKIS--GKIVVGIDG 229 (293)
T ss_dssp EEEEEE--EECTTCHHHHHHHHHHHHHTTCCC-SEEEESSH-HHHHHHHHHHHHTTCC--CCEEEEEEC
T ss_pred cEEeee--ccCCCCHHHHHHHHHHHHHhCCCC-CEEEECCc-hHHHHHHHHHHhCCCC--CeEEEEecC
Confidence 654332 245567888888888888776653 34445544 4455555556678988 999999987
No 496
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=74.93 E-value=10 Score=36.97 Aligned_cols=93 Identities=14% Similarity=0.097 Sum_probs=62.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEEE--eCCHhhHHHHHHcC-CCEEEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVL--TPNLKGFEAAVAAG-AKEVAI 191 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~l--~~n~~~ie~a~~~G-v~~v~i 191 (398)
.++.++-+++++.|.+.|+..||-- ..+ .|.+ -++.+++..++.+.+= +.+..+++.+++.| +|.|.+
T Consensus 195 ~~~~~~a~~~~~~l~~~~i~~iEqP--~~~------~d~~-~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 265 (367)
T 3dg3_A 195 GWSAAESLRAMREMADLDLLFAEEL--CPA------DDVL-SRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISI 265 (367)
T ss_dssp CSCHHHHHHHHHHTTTSCCSCEESC--SCT------TSHH-HHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCCEEECC--CCc------ccHH-HHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 4788999999999999999999952 221 2433 3444554333443321 24678888888876 688877
Q ss_pred eccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 015894 192 FASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVR 230 (398)
Q Consensus 192 ~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~ 230 (398)
=.. +- .+....++++.|+++|+.+.
T Consensus 266 k~~-------------~~-Git~~~~ia~~A~~~gi~~~ 290 (367)
T 3dg3_A 266 KTA-------------RT-GFTGSTRVHHLAEGLGLDMV 290 (367)
T ss_dssp CHH-------------HH-TTHHHHHHHHHHHHHTCEEE
T ss_pred ehh-------------hh-hHHHHHHHHHHHHHcCCeEE
Confidence 211 11 34556788899999999875
No 497
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=74.92 E-value=24 Score=34.49 Aligned_cols=94 Identities=13% Similarity=0.066 Sum_probs=62.4
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE--EeCCHhhHHHHHHcC-CCEEEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV--LTPNLKGFEAAVAAG-AKEVAI 191 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~--l~~n~~~ie~a~~~G-v~~v~i 191 (398)
.++.++-+++++.|.+.|+..||--.+ + .|.+. ++.+++..++.+.+ .+.+..+++.+++.| ++.|.+
T Consensus 204 ~~~~~~A~~~~~~l~~~~i~~iEqP~~--~------~d~~~-~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~ 274 (382)
T 3dgb_A 204 AWDEAVALRACRILGGNGIDLIEQPIS--R------NNRAG-MVRLNASSPAPIMADESIECVEDAFNLAREGAASVFAL 274 (382)
T ss_dssp CBCHHHHHHHHHHHHTTTCCCEECCBC--T------TCHHH-HHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEE
T ss_pred CCCHHHHHHHHHHHhhcCcCeeeCCCC--c------cCHHH-HHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 478899999999999999999996321 1 24433 44454333343332 124677888888765 788776
Q ss_pred eccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 015894 192 FASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVR 230 (398)
Q Consensus 192 ~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~ 230 (398)
=.. +--.+....++++.|+++|+.+.
T Consensus 275 k~~-------------~~GGit~~~~i~~~A~~~gi~~~ 300 (382)
T 3dgb_A 275 KIA-------------KNGGPRATLRTAAIAEAAGIGLY 300 (382)
T ss_dssp CHH-------------HHTSHHHHHHHHHHHHHHTCEEE
T ss_pred ccc-------------ccCCHHHHHHHHHHHHHcCCeEe
Confidence 221 11136667788999999999875
No 498
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=74.91 E-value=76 Score=32.56 Aligned_cols=194 Identities=15% Similarity=0.139 Sum_probs=111.5
Q ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhc-cCCcEEEEeCCHhhH---HHHHHcCCCEEE
Q 015894 115 IVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNV-EGARFPVLTPNLKGF---EAAVAAGAKEVA 190 (398)
Q Consensus 115 ~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~-~~~~l~~l~~n~~~i---e~a~~~Gv~~v~ 190 (398)
.++..++..| +...+.|++.|=+.+--++ +|..++.+.+... ..+.+.+..-+.+++ +.-++. .| .
T Consensus 190 ~lt~~D~~DI-~~~l~~g~d~I~lpfV~sa------eDv~~~~~~l~~~~~~i~IiakIEt~eav~nldeI~~~-~D--g 259 (500)
T 1a3w_A 190 ALSEKDKEDL-RFGVKNGVHMVFASFIRTA------NDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEILKV-TD--G 259 (500)
T ss_dssp SSCHHHHHHH-HHHHHHTCSEEEECSCCSH------HHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHHHHHH-SS--E
T ss_pred CCChhHHHHH-HHHHHcCCCEEEECCCCCH------HHHHHHHHHHHhcCCCcEEEEEECChHHHHhHHHHHHh-CC--E
Confidence 4666776666 4555789999988653322 2344444444432 356666666554443 333333 46 4
Q ss_pred EeccCchHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEE-E---eeeecCCCCCCCCHHHHHHHHHHHHhCCCCEEE
Q 015894 191 IFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGY-L---SCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEIS 266 (398)
Q Consensus 191 i~~~~Sd~~~~~~~~~s~~~~l~~~~~~v~~ak~~G~~v~~~-l---~~~fg~~~~~r~~~~~l~~~a~~l~~~Gad~I~ 266 (398)
+++.-.|.-.+-. .++.....+.+++.|+++|+.+-+. = ++.. +| +.+..++-+++..+ ..|+|.+.
T Consensus 260 ImvgrgDLgvelg----~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~-~~---~ptraEvsdva~av-~~G~d~vm 330 (500)
T 1a3w_A 260 VMVARGDLGIEIP----APEVLAVQKKLIAKSNLAGKPVICATQMLESMTY-NP---RPTRAEVSDVGNAI-LDGADCVM 330 (500)
T ss_dssp EEECHHHHHHHTT----GGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGS-CS---SCCHHHHHHHHHHH-HHTCSEEC
T ss_pred EEECchHhhhhcC----cHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhcc-CC---CchHHHHHHHHHHH-HhCCCEEE
Confidence 4445556543322 3455566678899999999987410 0 0111 22 33456666666544 47999988
Q ss_pred E-ccCcCcCCHHHHHHHHHHHHhhCCCCeEE----EE-----e---CC-ccchHHHHHHHHHHhCCC-EEeeccccC
Q 015894 267 L-GDTIGVGTPGTVIPMLEAVLDAVPVDKLA----VH-----F---HD-TYGQALSNILASLQMGIS-TVDSSVSGL 328 (398)
Q Consensus 267 L-~DT~G~~~P~~v~~lv~~l~~~~p~~~l~----~H-----~---Hn-d~GlA~ANalaAl~aGa~-~VD~Sv~Gl 328 (398)
| .||.-.-.|.+..+.+..+..+.-.. +. ++ . ++ +-..|.|...+|...++. +|-.|-.|-
T Consensus 331 Ls~eta~G~yPveaV~~m~~I~~~aE~~-~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ 406 (500)
T 1a3w_A 331 LSGETAKGNYPINAVTTMAETAVIAEQA-IAYLPNYDDMRNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLSTSGT 406 (500)
T ss_dssp BSTTTTTCSCHHHHHHHHHHHHHHHTTS-CCHHHHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHTCSCEEEECSSSH
T ss_pred ecchhhcchhHHHHHHHHHHHHHHhhhh-hhhhhHHHhhhhccccccchHHHHHHHHHHHHHhcCCCEEEEECCCch
Confidence 8 57777788988888887776554211 11 00 0 11 123556666677777877 556666664
No 499
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=74.87 E-value=11 Score=36.62 Aligned_cols=114 Identities=19% Similarity=0.141 Sum_probs=0.0
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCcccCCCCHHHHHHHHHhccCCcEEE--EeCCHhhHHHHHHc
Q 015894 107 DGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPV--LTPNLKGFEAAVAA 184 (398)
Q Consensus 107 DG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~~~~~~~~p~~~D~~~v~~~i~~~~~~~l~~--l~~n~~~ie~a~~~ 184 (398)
|..|. ++.++-+++++.|.+.|+..|| .|-..+..+-++.+++..++.+.+ .+.+..+++.+++.
T Consensus 190 Dan~~----~~~~~a~~~~~~l~~~~i~~iE---------qP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~ 256 (356)
T 3ro6_B 190 DPNQS----YDRDGLLRLDRLVQELGIEFIE---------QPFPAGRTDWLRALPKAIRRRIAADESLLGPADAFALAAP 256 (356)
T ss_dssp ECTTC----CCHHHHHHHHHHHHHTTCCCEE---------CCSCTTCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSS
T ss_pred eCCCC----CCHHHHHHHHHHHHhcCCCEEE---------CCCCCCcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhc
Q ss_pred C--CCEEEEeccCchHHHhhhcCCCHHHH--HHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHH
Q 015894 185 G--AKEVAIFASASESFSKSNINCTIEDS--LIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVS 254 (398)
Q Consensus 185 G--v~~v~i~~~~Sd~~~~~~~~~s~~~~--l~~~~~~v~~ak~~G~~v~~~l~~~fg~~~~~r~~~~~l~~~a 254 (398)
| +|.|.+ +.... +....++++.|+++|+.+. .+|..++.......+.++
T Consensus 257 ~~~~d~v~~---------------k~~~~GGit~~~~i~~~a~~~gi~~~------~~~~~es~i~~aa~~hla 309 (356)
T 3ro6_B 257 PAACGIFNI---------------KLMKCGGLAPARRIATIAETAGIDLM------WGCMDESRISIAAALHAA 309 (356)
T ss_dssp SCSCSEEEE---------------CHHHHCSHHHHHHHHHHHHHHTCEEE------ECCCSCCHHHHHHHHHHH
T ss_pred CCcCCEEEE---------------cccccCCHHHHHHHHHHHHHcCCEEE------ecCCcccHHHHHHHHHHH
No 500
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=74.87 E-value=29 Score=34.66 Aligned_cols=119 Identities=12% Similarity=0.097 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeeeec-------------CCCC-----------CCCCHH-------HHHHHHHHHH
Q 015894 210 DSLIRYRDVALAARELSIPVRGYLSCVVG-------------CPVE-----------GMVPPS-------KVAYVSKQLY 258 (398)
Q Consensus 210 ~~l~~~~~~v~~ak~~G~~v~~~l~~~fg-------------~~~~-----------~r~~~~-------~l~~~a~~l~ 258 (398)
+.++.++++++.+++.|-.+...|...-- .|-. -..+.+ .+.+.++.+.
T Consensus 101 ~~i~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~vapS~i~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~ 180 (419)
T 3l5a_A 101 ACIPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAI 180 (419)
T ss_dssp GGHHHHHHHHHHHHTTSCEEEEEEECCGGGCHHHHHHHSEEEESSCEEECSSSSEEEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeccCCCcccccccCCCceeCCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 44566777778888888777666654200 0000 012233 4445566777
Q ss_pred hCCCCEEEE-------------------ccCcCcCC----HHHHHHHHHHHHhhC----C-CCeEEEEeCCc------cc
Q 015894 259 DMGCSEISL-------------------GDTIGVGT----PGTVIPMLEAVLDAV----P-VDKLAVHFHDT------YG 304 (398)
Q Consensus 259 ~~Gad~I~L-------------------~DT~G~~~----P~~v~~lv~~l~~~~----p-~~~l~~H~Hnd------~G 304 (398)
++|.|.|-| .|-.|... +.-+.++++++++.+ | +.+|++-.--+ .|
T Consensus 181 ~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G 260 (419)
T 3l5a_A 181 KAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLG 260 (419)
T ss_dssp HTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEE
T ss_pred HcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCC
Confidence 899998877 24455444 355778888888876 3 55677765321 13
Q ss_pred hHHH----HHHHHHH-hCCCEEeeccccC
Q 015894 305 QALS----NILASLQ-MGISTVDSSVSGL 328 (398)
Q Consensus 305 lA~A----NalaAl~-aGa~~VD~Sv~Gl 328 (398)
+-.. -+....+ +|++.|+++-.+.
T Consensus 261 ~~~ed~~~la~~L~~~~Gvd~I~vs~g~~ 289 (419)
T 3l5a_A 261 YTIDEFNQLIDWVMDVSNIQYLAIASWGR 289 (419)
T ss_dssp ECHHHHHHHHHHHHHHSCCCCEEECCTTC
T ss_pred CCHHHHHHHHHHHHhhcCCcEEEEeeCCc
Confidence 3222 2333345 8999999997653
Done!