Query 015897
Match_columns 398
No_of_seqs 180 out of 1381
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 01:55:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015897.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015897hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00112 malate dehydrogenase 100.0 1.1E-95 2E-100 742.3 37.0 393 2-397 1-400 (444)
2 TIGR01757 Malate-DH_plant mala 100.0 5.2E-81 1.1E-85 626.4 33.8 339 55-397 2-344 (387)
3 PRK05442 malate dehydrogenase; 100.0 9.5E-68 2.1E-72 522.8 29.7 298 93-397 1-302 (326)
4 COG0039 Mdh Malate/lactate deh 100.0 8.2E-68 1.8E-72 515.2 28.7 284 97-397 1-287 (313)
5 TIGR01759 MalateDH-SF1 malate 100.0 1.7E-67 3.6E-72 520.4 31.0 298 94-397 1-303 (323)
6 cd05295 MDH_like Malate dehydr 100.0 1.1E-66 2.4E-71 529.8 31.1 304 85-397 111-430 (452)
7 KOG1496 Malate dehydrogenase [ 100.0 4.2E-66 9.2E-71 476.0 21.7 301 93-397 1-306 (332)
8 cd05290 LDH_3 A subgroup of L- 100.0 4.9E-65 1.1E-69 500.1 29.6 281 98-397 1-289 (307)
9 cd00704 MDH Malate dehydrogena 100.0 2.9E-65 6.2E-70 505.0 27.8 294 98-397 2-302 (323)
10 cd01338 MDH_choloroplast_like 100.0 1.3E-64 2.9E-69 500.1 29.5 297 95-397 1-300 (322)
11 TIGR01771 L-LDH-NAD L-lactate 100.0 7.4E-64 1.6E-68 490.5 28.2 279 101-397 1-284 (299)
12 TIGR01758 MDH_euk_cyt malate d 100.0 9.3E-64 2E-68 494.5 28.0 297 98-397 1-302 (324)
13 PLN02602 lactate dehydrogenase 100.0 2.7E-63 5.8E-68 494.8 28.9 305 74-397 14-328 (350)
14 cd05293 LDH_1 A subgroup of L- 100.0 1.1E-62 2.3E-67 484.8 30.6 284 96-397 3-293 (312)
15 PRK00066 ldh L-lactate dehydro 100.0 1.2E-62 2.7E-67 485.3 30.1 285 94-397 4-293 (315)
16 cd01336 MDH_cytoplasmic_cytoso 100.0 3.5E-62 7.6E-67 483.8 28.5 299 95-397 1-304 (325)
17 TIGR01756 LDH_protist lactate 100.0 6E-62 1.3E-66 478.8 27.6 281 113-397 2-288 (313)
18 PLN00135 malate dehydrogenase 100.0 7.5E-62 1.6E-66 477.0 27.7 277 116-397 2-284 (309)
19 cd05291 HicDH_like L-2-hydroxy 100.0 6.8E-61 1.5E-65 471.4 30.7 283 97-397 1-287 (306)
20 cd00300 LDH_like L-lactate deh 100.0 3.9E-60 8.5E-65 464.8 30.2 280 99-397 1-282 (300)
21 KOG1495 Lactate dehydrogenase 100.0 6.9E-60 1.5E-64 441.3 24.8 284 96-397 20-310 (332)
22 PTZ00117 malate dehydrogenase; 100.0 1.6E-57 3.4E-62 449.8 31.2 284 95-397 4-294 (319)
23 cd05292 LDH_2 A subgroup of L- 100.0 1.5E-57 3.2E-62 448.2 29.8 282 97-397 1-288 (308)
24 PTZ00082 L-lactate dehydrogena 100.0 1.2E-56 2.6E-61 443.6 31.5 286 93-397 3-300 (321)
25 cd05294 LDH-like_MDH_nadp A la 100.0 6.1E-57 1.3E-61 443.8 29.3 286 97-397 1-289 (309)
26 TIGR01763 MalateDH_bact malate 100.0 1.8E-56 3.9E-61 439.7 30.2 280 97-397 2-285 (305)
27 cd01337 MDH_glyoxysomal_mitoch 100.0 2.2E-56 4.7E-61 438.6 27.1 272 97-397 1-286 (310)
28 TIGR01772 MDH_euk_gproteo mala 100.0 3E-56 6.5E-61 438.2 26.9 271 98-397 1-286 (312)
29 PRK06223 malate dehydrogenase; 100.0 1.4E-54 3.1E-59 426.2 30.0 281 96-397 2-286 (307)
30 cd01339 LDH-like_MDH L-lactate 100.0 8.3E-54 1.8E-58 420.0 30.1 278 99-397 1-282 (300)
31 PTZ00325 malate dehydrogenase; 100.0 9E-53 2E-57 414.8 28.0 275 93-397 5-293 (321)
32 PLN00106 malate dehydrogenase 100.0 3E-51 6.5E-56 404.3 27.1 273 96-397 18-304 (323)
33 PRK05086 malate dehydrogenase; 100.0 4E-51 8.6E-56 402.9 27.4 272 97-397 1-286 (312)
34 cd00650 LDH_MDH_like NAD-depen 100.0 8.4E-50 1.8E-54 384.7 26.4 243 99-397 1-245 (263)
35 KOG1494 NAD-dependent malate d 100.0 1.5E-39 3.2E-44 306.1 17.2 275 94-394 26-311 (345)
36 PRK15076 alpha-galactosidase; 100.0 7.5E-33 1.6E-37 283.6 26.2 274 96-394 1-364 (431)
37 cd05197 GH4_glycoside_hydrolas 100.0 1E-32 2.2E-37 281.9 26.4 275 97-394 1-370 (425)
38 cd05296 GH4_P_beta_glucosidase 100.0 1.8E-31 3.9E-36 272.3 26.3 276 97-394 1-359 (419)
39 PF00056 Ldh_1_N: lactate/mala 100.0 2.7E-32 5.9E-37 239.7 15.1 140 97-245 1-141 (141)
40 PF02866 Ldh_1_C: lactate/mala 100.0 3.3E-31 7.2E-36 240.5 13.3 144 248-397 1-150 (174)
41 cd05297 GH4_alpha_glucosidase_ 100.0 1.6E-29 3.4E-34 259.1 25.4 275 97-394 1-367 (423)
42 cd05298 GH4_GlvA_pagL_like Gly 100.0 8.7E-29 1.9E-33 253.5 28.2 273 97-394 1-373 (437)
43 COG1486 CelF Alpha-galactosida 100.0 3.6E-27 7.8E-32 237.7 21.4 278 95-394 2-376 (442)
44 PF02056 Glyco_hydro_4: Family 99.8 2.5E-18 5.4E-23 156.7 16.8 156 98-265 1-183 (183)
45 PF02737 3HCDH_N: 3-hydroxyacy 98.5 2.6E-07 5.7E-12 84.4 8.4 104 98-228 1-118 (180)
46 PRK07819 3-hydroxybutyryl-CoA 98.5 5.6E-07 1.2E-11 88.1 10.8 109 93-228 2-125 (286)
47 PRK07066 3-hydroxybutyryl-CoA 98.4 1.5E-06 3.3E-11 86.4 10.5 112 96-233 7-128 (321)
48 COG1250 FadB 3-hydroxyacyl-CoA 98.4 2E-06 4.4E-11 84.7 10.3 143 96-267 3-178 (307)
49 PRK08293 3-hydroxybutyryl-CoA 98.3 5.5E-06 1.2E-10 80.9 11.2 106 96-227 3-123 (287)
50 TIGR01915 npdG NADPH-dependent 98.3 2.2E-05 4.8E-10 73.7 14.0 104 97-227 1-106 (219)
51 PRK05808 3-hydroxybutyryl-CoA 98.2 6.9E-06 1.5E-10 79.9 10.5 123 96-246 3-139 (282)
52 PRK11730 fadB multifunctional 98.2 1.1E-05 2.3E-10 88.6 11.5 110 96-232 313-437 (715)
53 PRK06130 3-hydroxybutyryl-CoA 98.2 1.6E-05 3.4E-10 78.4 11.6 108 94-227 2-118 (311)
54 TIGR02441 fa_ox_alpha_mit fatt 98.2 9.9E-06 2.1E-10 89.1 11.0 143 96-267 335-510 (737)
55 PRK06035 3-hydroxyacyl-CoA deh 98.2 1.8E-05 3.8E-10 77.5 11.5 105 96-227 3-124 (291)
56 TIGR02437 FadB fatty oxidation 98.1 1.2E-05 2.6E-10 88.1 11.3 144 95-267 312-488 (714)
57 PRK07530 3-hydroxybutyryl-CoA 98.1 1.4E-05 2.9E-10 78.3 10.4 106 95-227 3-122 (292)
58 PLN02545 3-hydroxybutyryl-CoA 98.1 1.7E-05 3.8E-10 77.6 11.0 106 95-227 3-122 (295)
59 TIGR02440 FadJ fatty oxidation 98.1 1.6E-05 3.5E-10 87.0 11.6 110 96-232 304-429 (699)
60 PRK11154 fadJ multifunctional 98.1 1.6E-05 3.6E-10 87.0 11.6 143 96-267 309-485 (708)
61 COG2085 Predicted dinucleotide 98.1 3.8E-05 8.2E-10 71.5 11.7 124 96-255 1-139 (211)
62 PF03807 F420_oxidored: NADP o 98.1 6.9E-06 1.5E-10 66.5 5.9 95 98-224 1-96 (96)
63 PRK09260 3-hydroxybutyryl-CoA 98.1 2.7E-05 5.8E-10 76.1 11.1 98 97-218 2-113 (288)
64 PRK08268 3-hydroxy-acyl-CoA de 98.0 2.8E-05 6E-10 82.1 10.7 106 94-226 5-124 (507)
65 PF01210 NAD_Gly3P_dh_N: NAD-d 98.0 1.5E-05 3.3E-10 71.1 7.2 111 98-236 1-122 (157)
66 TIGR02279 PaaC-3OHAcCoADH 3-hy 98.0 3.2E-05 7E-10 81.5 9.9 106 95-227 4-123 (503)
67 KOG2304 3-hydroxyacyl-CoA dehy 97.9 1.2E-05 2.5E-10 75.3 3.9 114 93-232 8-141 (298)
68 PRK07531 bifunctional 3-hydrox 97.9 0.00012 2.6E-09 77.1 11.8 108 96-229 4-121 (495)
69 PF03721 UDPG_MGDP_dh_N: UDP-g 97.8 5.2E-05 1.1E-09 69.7 6.9 113 97-229 1-128 (185)
70 COG1004 Ugd Predicted UDP-gluc 97.8 0.00027 5.9E-09 71.4 11.8 80 97-186 1-90 (414)
71 PRK12439 NAD(P)H-dependent gly 97.7 0.00044 9.5E-09 69.4 12.9 116 94-236 5-130 (341)
72 PRK00094 gpsA NAD(P)H-dependen 97.7 0.00027 5.9E-09 69.6 10.8 105 96-226 1-109 (325)
73 PRK06129 3-hydroxyacyl-CoA deh 97.6 0.0004 8.7E-09 68.6 11.0 108 96-229 2-123 (308)
74 PLN03209 translocon at the inn 97.6 0.00047 1E-08 73.4 11.5 118 94-222 78-207 (576)
75 PF11975 Glyco_hydro_4C: Famil 97.6 9E-05 1.9E-09 70.3 5.5 56 335-395 139-194 (232)
76 PF03446 NAD_binding_2: NAD bi 97.6 0.00028 6.1E-09 63.1 8.4 65 96-180 1-65 (163)
77 PRK07680 late competence prote 97.5 0.00079 1.7E-08 65.2 11.2 100 97-226 1-100 (273)
78 PRK14620 NAD(P)H-dependent gly 97.4 0.0011 2.3E-08 65.9 10.7 115 97-237 1-126 (326)
79 KOG1502 Flavonol reductase/cin 97.4 0.0013 2.8E-08 65.3 10.9 124 95-228 5-133 (327)
80 PRK14618 NAD(P)H-dependent gly 97.4 0.001 2.3E-08 66.1 10.0 102 95-226 3-108 (328)
81 PRK07634 pyrroline-5-carboxyla 97.3 0.0021 4.4E-08 60.9 11.3 102 95-227 3-104 (245)
82 PRK08655 prephenate dehydrogen 97.3 0.0027 5.8E-08 66.0 12.9 93 97-223 1-93 (437)
83 TIGR03026 NDP-sugDHase nucleot 97.3 0.0015 3.2E-08 67.2 10.9 78 97-184 1-88 (411)
84 TIGR03376 glycerol3P_DH glycer 97.3 0.0015 3.3E-08 65.6 10.7 106 98-222 1-116 (342)
85 PF10727 Rossmann-like: Rossma 97.3 0.0011 2.3E-08 57.4 8.2 83 95-211 9-91 (127)
86 PLN02688 pyrroline-5-carboxyla 97.3 0.002 4.3E-08 62.0 11.0 99 97-226 1-99 (266)
87 PTZ00345 glycerol-3-phosphate 97.3 0.0023 4.9E-08 65.0 11.6 107 93-222 8-129 (365)
88 PRK12491 pyrroline-5-carboxyla 97.3 0.0025 5.4E-08 62.0 11.1 99 97-226 3-101 (272)
89 PLN02166 dTDP-glucose 4,6-dehy 97.3 0.0026 5.6E-08 66.0 11.9 113 94-223 118-234 (436)
90 PLN02353 probable UDP-glucose 97.3 0.0019 4.1E-08 67.7 10.9 119 96-227 1-133 (473)
91 PRK12921 2-dehydropantoate 2-r 97.2 0.0014 3.1E-08 63.9 9.3 106 97-230 1-110 (305)
92 PRK11880 pyrroline-5-carboxyla 97.2 0.0023 5E-08 61.5 10.3 97 96-226 2-98 (267)
93 COG0240 GpsA Glycerol-3-phosph 97.2 0.0018 3.9E-08 64.4 9.6 112 96-237 1-125 (329)
94 PF01118 Semialdhyde_dh: Semia 97.2 0.0017 3.6E-08 55.2 8.2 96 98-222 1-97 (121)
95 PRK15057 UDP-glucose 6-dehydro 97.2 0.0027 5.8E-08 65.0 11.1 76 97-183 1-84 (388)
96 PRK06522 2-dehydropantoate 2-r 97.2 0.002 4.4E-08 62.7 9.6 104 97-230 1-108 (304)
97 PRK07417 arogenate dehydrogena 97.2 0.0023 5E-08 62.3 9.6 66 97-181 1-66 (279)
98 COG0300 DltE Short-chain dehyd 97.2 0.0065 1.4E-07 58.9 12.5 116 94-223 4-143 (265)
99 PLN02695 GDP-D-mannose-3',5'-e 97.1 0.0014 3.1E-08 66.3 8.0 129 73-223 1-137 (370)
100 PRK08229 2-dehydropantoate 2-r 97.1 0.0032 7E-08 62.6 10.4 105 96-228 2-113 (341)
101 PRK06928 pyrroline-5-carboxyla 97.1 0.0042 9.2E-08 60.5 10.9 102 96-227 1-103 (277)
102 COG1748 LYS9 Saccharopine dehy 97.1 0.0047 1E-07 63.0 11.4 150 96-281 1-160 (389)
103 COG0345 ProC Pyrroline-5-carbo 97.1 0.003 6.5E-08 61.3 9.5 99 96-226 1-99 (266)
104 PRK07679 pyrroline-5-carboxyla 97.0 0.0058 1.3E-07 59.4 11.2 99 97-226 4-103 (279)
105 CHL00194 ycf39 Ycf39; Provisio 97.0 0.0031 6.8E-08 62.1 9.3 108 97-222 1-109 (317)
106 PRK07502 cyclohexadienyl dehyd 97.0 0.0091 2E-07 58.8 12.4 70 96-181 6-75 (307)
107 PLN02206 UDP-glucuronate decar 97.0 0.0055 1.2E-07 63.7 11.3 112 95-223 118-233 (442)
108 TIGR03589 PseB UDP-N-acetylglu 97.0 0.0031 6.8E-08 62.5 9.1 118 96-222 4-124 (324)
109 PLN02778 3,5-epimerase/4-reduc 96.9 0.0096 2.1E-07 58.4 11.6 88 96-211 9-101 (298)
110 PRK11064 wecC UDP-N-acetyl-D-m 96.9 0.0059 1.3E-07 63.0 10.4 112 96-227 3-125 (415)
111 PLN02427 UDP-apiose/xylose syn 96.9 0.0023 5E-08 64.8 7.3 114 95-223 13-136 (386)
112 PLN02650 dihydroflavonol-4-red 96.9 0.0058 1.3E-07 60.9 10.0 115 96-222 5-127 (351)
113 PF01073 3Beta_HSD: 3-beta hyd 96.9 0.0022 4.7E-08 62.6 6.7 115 101-227 2-119 (280)
114 PLN00198 anthocyanidin reducta 96.9 0.0061 1.3E-07 60.3 9.9 114 96-222 9-130 (338)
115 PF13460 NAD_binding_10: NADH( 96.8 0.0025 5.5E-08 57.1 6.1 93 99-222 1-97 (183)
116 PRK14619 NAD(P)H-dependent gly 96.8 0.0059 1.3E-07 60.3 8.8 80 96-224 4-84 (308)
117 PLN02662 cinnamyl-alcohol dehy 96.7 0.0094 2E-07 58.2 10.1 115 96-222 4-126 (322)
118 PLN02989 cinnamyl-alcohol dehy 96.7 0.011 2.3E-07 58.1 10.2 116 95-222 4-128 (325)
119 PRK15181 Vi polysaccharide bio 96.7 0.0057 1.2E-07 61.1 8.3 121 91-222 10-140 (348)
120 COG0287 TyrA Prephenate dehydr 96.7 0.017 3.7E-07 56.5 11.4 108 96-236 3-112 (279)
121 PRK11908 NAD-dependent epimera 96.7 0.0038 8.1E-08 62.2 7.0 111 96-223 1-118 (347)
122 PRK07102 short chain dehydroge 96.7 0.018 3.8E-07 54.0 11.0 114 96-223 1-135 (243)
123 PRK10675 UDP-galactose-4-epime 96.6 0.022 4.7E-07 56.2 11.8 116 97-223 1-124 (338)
124 PRK06476 pyrroline-5-carboxyla 96.6 0.012 2.6E-07 56.4 9.7 70 97-181 1-70 (258)
125 PRK12549 shikimate 5-dehydroge 96.6 0.0097 2.1E-07 58.3 9.1 73 96-179 127-199 (284)
126 TIGR02622 CDP_4_6_dhtase CDP-g 96.6 0.0081 1.7E-07 59.9 8.6 117 96-223 4-127 (349)
127 PRK14982 acyl-ACP reductase; P 96.6 0.0088 1.9E-07 60.1 8.8 97 96-228 155-252 (340)
128 PRK15182 Vi polysaccharide bio 96.6 0.021 4.5E-07 59.2 11.8 74 95-184 5-88 (425)
129 PRK08267 short chain dehydroge 96.6 0.0086 1.9E-07 56.7 8.4 117 96-224 1-137 (260)
130 COG4221 Short-chain alcohol de 96.5 0.015 3.3E-07 55.5 9.4 114 97-223 7-140 (246)
131 PLN02214 cinnamoyl-CoA reducta 96.5 0.019 4.1E-07 57.3 10.6 113 96-222 10-126 (342)
132 TIGR01505 tartro_sem_red 2-hyd 96.5 0.008 1.7E-07 58.7 7.7 63 98-180 1-63 (291)
133 KOG1205 Predicted dehydrogenas 96.5 0.015 3.4E-07 56.8 9.5 120 96-229 12-156 (282)
134 TIGR01777 yfcH conserved hypot 96.5 0.0049 1.1E-07 59.0 6.0 96 99-211 1-100 (292)
135 PTZ00431 pyrroline carboxylate 96.5 0.035 7.6E-07 53.5 11.7 91 97-226 4-94 (260)
136 PF01488 Shikimate_DH: Shikima 96.5 0.0094 2E-07 51.7 7.0 76 95-183 11-86 (135)
137 PLN02896 cinnamyl-alcohol dehy 96.4 0.039 8.5E-07 55.0 12.4 113 96-223 10-138 (353)
138 PLN02986 cinnamyl-alcohol dehy 96.4 0.048 1E-06 53.5 12.8 114 96-222 5-127 (322)
139 PLN02240 UDP-glucose 4-epimera 96.4 0.044 9.4E-07 54.3 12.6 118 95-223 4-132 (352)
140 PRK06194 hypothetical protein; 96.4 0.041 8.9E-07 52.8 11.9 114 96-223 6-148 (287)
141 PF02719 Polysacc_synt_2: Poly 96.4 0.0046 9.9E-08 60.8 5.1 122 99-229 1-139 (293)
142 PRK06545 prephenate dehydrogen 96.4 0.04 8.7E-07 55.7 12.1 68 97-180 1-68 (359)
143 PTZ00142 6-phosphogluconate de 96.4 0.02 4.2E-07 60.1 10.1 101 96-225 1-104 (470)
144 PRK12939 short chain dehydroge 96.4 0.046 9.9E-07 51.0 11.7 113 96-223 7-143 (250)
145 PRK05708 2-dehydropantoate 2-r 96.4 0.027 5.8E-07 55.7 10.5 124 97-249 3-128 (305)
146 COG2910 Putative NADH-flavin r 96.4 0.015 3.3E-07 53.3 7.9 107 97-225 1-107 (211)
147 PRK08125 bifunctional UDP-gluc 96.4 0.0086 1.9E-07 65.3 7.6 114 93-223 312-432 (660)
148 PRK11559 garR tartronate semia 96.4 0.017 3.6E-07 56.5 8.9 64 97-180 3-66 (296)
149 PLN02583 cinnamoyl-CoA reducta 96.4 0.027 5.8E-07 55.0 10.3 118 96-222 6-127 (297)
150 PRK13394 3-hydroxybutyrate deh 96.3 0.034 7.4E-07 52.3 10.7 114 96-223 7-144 (262)
151 COG1893 ApbA Ketopantoate redu 96.3 0.021 4.6E-07 56.6 9.5 112 97-236 1-114 (307)
152 PRK06249 2-dehydropantoate 2-r 96.3 0.02 4.4E-07 56.6 9.4 122 95-248 4-129 (313)
153 PRK11150 rfaD ADP-L-glycero-D- 96.3 0.03 6.6E-07 54.5 10.6 107 99-222 2-115 (308)
154 TIGR03466 HpnA hopanoid-associ 96.3 0.01 2.2E-07 57.9 7.1 111 97-223 1-113 (328)
155 cd05213 NAD_bind_Glutamyl_tRNA 96.3 0.022 4.8E-07 56.4 9.6 103 95-228 177-279 (311)
156 PRK09987 dTDP-4-dehydrorhamnos 96.3 0.01 2.3E-07 58.0 7.1 99 97-222 1-103 (299)
157 PRK12746 short chain dehydroge 96.3 0.096 2.1E-06 49.2 13.4 46 97-150 7-52 (254)
158 PRK10538 malonic semialdehyde 96.3 0.022 4.7E-07 53.7 9.0 115 97-224 1-135 (248)
159 PRK06196 oxidoreductase; Provi 96.3 0.027 5.9E-07 55.3 9.9 114 96-223 26-156 (315)
160 PRK07326 short chain dehydroge 96.3 0.074 1.6E-06 49.3 12.4 114 97-224 7-141 (237)
161 PRK08507 prephenate dehydrogen 96.2 0.041 8.9E-07 53.3 10.9 66 97-180 1-66 (275)
162 PRK07231 fabG 3-ketoacyl-(acyl 96.2 0.07 1.5E-06 49.8 12.0 112 96-223 5-141 (251)
163 TIGR03206 benzo_BadH 2-hydroxy 96.2 0.075 1.6E-06 49.6 12.2 113 96-223 3-139 (250)
164 PRK12429 3-hydroxybutyrate deh 96.2 0.07 1.5E-06 50.0 11.9 114 96-224 4-141 (258)
165 PLN02572 UDP-sulfoquinovose sy 96.2 0.021 4.5E-07 59.4 8.9 27 95-121 46-72 (442)
166 PRK07806 short chain dehydroge 96.2 0.044 9.5E-07 51.3 10.4 25 97-121 7-31 (248)
167 TIGR00872 gnd_rel 6-phosphoglu 96.2 0.029 6.2E-07 55.2 9.4 96 97-225 1-96 (298)
168 PRK07890 short chain dehydroge 96.2 0.12 2.6E-06 48.5 13.4 79 95-183 4-93 (258)
169 COG2084 MmsB 3-hydroxyisobutyr 96.1 0.019 4.2E-07 56.3 8.0 66 97-181 1-66 (286)
170 COG1086 Predicted nucleoside-d 96.1 0.027 5.8E-07 59.6 9.4 125 94-228 248-386 (588)
171 PRK07424 bifunctional sterol d 96.1 0.032 7E-07 57.4 9.9 104 95-210 177-290 (406)
172 PLN02256 arogenate dehydrogena 96.1 0.083 1.8E-06 52.3 12.2 92 95-223 35-128 (304)
173 PRK12490 6-phosphogluconate de 96.1 0.029 6.2E-07 55.2 8.8 92 97-223 1-95 (299)
174 PRK07523 gluconate 5-dehydroge 96.0 0.083 1.8E-06 49.8 11.7 118 96-224 10-147 (255)
175 PRK08213 gluconate 5-dehydroge 96.0 0.15 3.2E-06 48.2 13.4 118 96-223 12-149 (259)
176 PRK07825 short chain dehydroge 96.0 0.021 4.7E-07 54.5 7.7 114 96-223 5-137 (273)
177 PRK08339 short chain dehydroge 96.0 0.15 3.1E-06 48.8 13.4 117 96-224 8-145 (263)
178 PRK06180 short chain dehydroge 96.0 0.035 7.6E-07 53.3 9.2 39 96-143 4-42 (277)
179 PRK07478 short chain dehydroge 96.0 0.13 2.8E-06 48.4 12.9 117 96-223 6-143 (254)
180 PRK07774 short chain dehydroge 96.0 0.091 2E-06 49.1 11.6 77 96-182 6-93 (250)
181 PRK08269 3-hydroxybutyryl-CoA 96.0 0.034 7.4E-07 55.3 8.9 58 159-232 64-123 (314)
182 PRK07454 short chain dehydroge 96.0 0.12 2.7E-06 48.0 12.4 117 95-224 5-143 (241)
183 TIGR01745 asd_gamma aspartate- 96.0 0.047 1E-06 55.3 10.0 72 97-181 1-73 (366)
184 PRK07814 short chain dehydroge 96.0 0.082 1.8E-06 50.3 11.3 117 96-223 10-147 (263)
185 COG1712 Predicted dinucleotide 96.0 0.054 1.2E-06 51.2 9.5 97 97-226 1-97 (255)
186 PRK08643 acetoin reductase; Va 95.9 0.1 2.2E-06 49.1 11.7 118 97-224 3-140 (256)
187 PRK05650 short chain dehydroge 95.9 0.15 3.2E-06 48.7 12.9 112 97-223 1-136 (270)
188 PRK08265 short chain dehydroge 95.9 0.029 6.3E-07 53.4 8.0 114 96-223 6-137 (261)
189 PRK05653 fabG 3-ketoacyl-(acyl 95.9 0.061 1.3E-06 49.8 10.0 46 96-150 5-50 (246)
190 PRK06598 aspartate-semialdehyd 95.9 0.05 1.1E-06 55.3 9.9 73 96-181 1-74 (369)
191 PRK09599 6-phosphogluconate de 95.9 0.039 8.5E-07 54.3 9.1 64 97-180 1-67 (301)
192 PRK15461 NADH-dependent gamma- 95.9 0.013 2.9E-07 57.5 5.7 65 96-180 1-65 (296)
193 KOG2711 Glycerol-3-phosphate d 95.9 0.13 2.9E-06 51.3 12.4 130 94-244 19-169 (372)
194 PRK06728 aspartate-semialdehyd 95.9 0.045 9.7E-07 55.2 9.4 76 93-181 2-77 (347)
195 PRK05866 short chain dehydroge 95.9 0.12 2.7E-06 50.3 12.4 117 96-223 40-178 (293)
196 PRK12937 short chain dehydroge 95.8 0.12 2.6E-06 48.1 11.8 118 94-223 3-140 (245)
197 TIGR02354 thiF_fam2 thiamine b 95.8 0.098 2.1E-06 48.6 10.9 25 96-121 21-45 (200)
198 TIGR01181 dTDP_gluc_dehyt dTDP 95.8 0.027 5.9E-07 54.3 7.5 117 98-222 1-124 (317)
199 TIGR01214 rmlD dTDP-4-dehydror 95.8 0.028 6.1E-07 53.9 7.6 95 98-222 1-99 (287)
200 PLN00141 Tic62-NAD(P)-related 95.8 0.02 4.4E-07 54.3 6.4 28 94-121 15-42 (251)
201 COG0451 WcaG Nucleoside-diphos 95.8 0.03 6.5E-07 54.0 7.7 100 98-210 2-105 (314)
202 PRK05671 aspartate-semialdehyd 95.8 0.053 1.2E-06 54.5 9.6 74 94-181 2-75 (336)
203 PLN02383 aspartate semialdehyd 95.8 0.043 9.2E-07 55.3 8.9 73 95-181 6-78 (344)
204 PF02558 ApbA: Ketopantoate re 95.8 0.073 1.6E-06 46.3 9.4 120 99-249 1-125 (151)
205 PRK13304 L-aspartate dehydroge 95.8 0.07 1.5E-06 51.7 10.1 70 96-181 1-70 (265)
206 cd01065 NAD_bind_Shikimate_DH 95.8 0.042 9.1E-07 47.9 7.8 74 96-183 19-92 (155)
207 PRK06101 short chain dehydroge 95.8 0.037 8E-07 51.9 8.0 116 96-223 1-128 (240)
208 cd01078 NAD_bind_H4MPT_DH NADP 95.8 0.042 9.1E-07 50.3 8.1 75 96-182 28-107 (194)
209 PRK08085 gluconate 5-dehydroge 95.8 0.096 2.1E-06 49.3 10.8 115 96-223 9-145 (254)
210 PRK07666 fabG 3-ketoacyl-(acyl 95.8 0.21 4.5E-06 46.5 13.0 114 96-224 7-144 (239)
211 PRK06197 short chain dehydroge 95.8 0.12 2.6E-06 50.4 11.8 115 96-223 16-152 (306)
212 PRK05717 oxidoreductase; Valid 95.7 0.028 6E-07 53.1 6.9 117 96-223 10-144 (255)
213 PRK07832 short chain dehydroge 95.7 0.21 4.6E-06 47.6 13.2 119 97-225 1-140 (272)
214 PRK07067 sorbitol dehydrogenas 95.7 0.055 1.2E-06 51.1 8.9 116 96-223 6-140 (257)
215 TIGR02415 23BDH acetoin reduct 95.7 0.13 2.7E-06 48.3 11.1 111 98-222 2-136 (254)
216 PRK07453 protochlorophyllide o 95.7 0.16 3.5E-06 49.9 12.3 118 96-222 6-144 (322)
217 PRK09186 flagellin modificatio 95.6 0.19 4E-06 47.2 12.3 46 96-150 4-49 (256)
218 PRK07069 short chain dehydroge 95.6 0.2 4.3E-06 46.8 12.4 116 98-224 1-139 (251)
219 PRK07109 short chain dehydroge 95.6 0.17 3.7E-06 50.4 12.6 115 96-223 8-144 (334)
220 PRK06181 short chain dehydroge 95.6 0.15 3.3E-06 48.1 11.8 74 97-183 2-89 (263)
221 PRK09072 short chain dehydroge 95.6 0.12 2.6E-06 49.0 10.9 113 96-224 5-140 (263)
222 PRK12480 D-lactate dehydrogena 95.6 0.038 8.3E-07 55.3 7.7 90 97-224 147-236 (330)
223 PRK06482 short chain dehydroge 95.6 0.05 1.1E-06 52.0 8.3 114 97-223 3-135 (276)
224 PRK05867 short chain dehydroge 95.6 0.22 4.7E-06 46.9 12.6 116 96-222 9-145 (253)
225 PLN02657 3,8-divinyl protochlo 95.6 0.22 4.8E-06 50.9 13.4 115 94-223 58-182 (390)
226 PRK11199 tyrA bifunctional cho 95.6 0.04 8.7E-07 56.1 8.0 79 96-223 98-176 (374)
227 PRK07024 short chain dehydroge 95.6 0.11 2.4E-06 49.2 10.5 44 97-149 3-46 (257)
228 PRK07035 short chain dehydroge 95.6 0.25 5.3E-06 46.4 12.8 116 96-223 8-145 (252)
229 PRK12384 sorbitol-6-phosphate 95.6 0.19 4.1E-06 47.4 12.1 116 97-224 3-142 (259)
230 PRK06128 oxidoreductase; Provi 95.6 0.15 3.4E-06 49.6 11.7 121 96-223 55-192 (300)
231 TIGR02371 ala_DH_arch alanine 95.6 0.047 1E-06 54.5 8.2 75 94-180 126-200 (325)
232 PF01370 Epimerase: NAD depend 95.6 0.015 3.3E-07 53.7 4.4 109 99-223 1-116 (236)
233 PRK07677 short chain dehydroge 95.6 0.31 6.7E-06 45.8 13.4 114 97-222 2-137 (252)
234 PRK06172 short chain dehydroge 95.5 0.17 3.7E-06 47.5 11.6 47 96-151 7-53 (253)
235 PRK12747 short chain dehydroge 95.5 0.3 6.4E-06 45.9 13.2 47 96-150 4-50 (252)
236 PLN02780 ketoreductase/ oxidor 95.5 0.25 5.5E-06 48.9 13.2 116 96-223 53-193 (320)
237 PRK06182 short chain dehydroge 95.5 0.056 1.2E-06 51.6 8.3 112 96-223 3-133 (273)
238 TIGR01472 gmd GDP-mannose 4,6- 95.5 0.044 9.5E-07 54.4 7.7 25 97-121 1-25 (343)
239 PRK08040 putative semialdehyde 95.5 0.065 1.4E-06 53.8 8.9 73 95-181 3-75 (336)
240 PRK06124 gluconate 5-dehydroge 95.5 0.13 2.8E-06 48.4 10.6 121 94-225 9-149 (256)
241 PRK05876 short chain dehydroge 95.5 0.19 4E-06 48.5 11.8 114 96-223 6-143 (275)
242 PRK06138 short chain dehydroge 95.5 0.26 5.6E-06 46.0 12.5 112 96-223 5-140 (252)
243 KOG0409 Predicted dehydrogenas 95.5 0.042 9.1E-07 54.0 7.1 100 96-218 35-151 (327)
244 PRK12828 short chain dehydroge 95.4 0.064 1.4E-06 49.5 8.2 77 96-182 7-92 (239)
245 COG0569 TrkA K+ transport syst 95.4 0.018 3.9E-07 54.5 4.5 69 97-181 1-75 (225)
246 PRK08340 glucose-1-dehydrogena 95.4 0.16 3.4E-06 48.1 11.0 77 97-183 1-87 (259)
247 PRK05565 fabG 3-ketoacyl-(acyl 95.4 0.33 7.2E-06 45.0 13.1 47 96-150 5-51 (247)
248 PRK08945 putative oxoacyl-(acy 95.4 0.37 7.9E-06 45.1 13.4 118 95-223 11-152 (247)
249 PRK10217 dTDP-glucose 4,6-dehy 95.4 0.051 1.1E-06 54.0 7.9 103 96-210 1-114 (355)
250 PF01113 DapB_N: Dihydrodipico 95.4 0.063 1.4E-06 45.9 7.4 74 97-179 1-74 (124)
251 PRK12825 fabG 3-ketoacyl-(acyl 95.4 0.25 5.5E-06 45.6 12.1 26 96-121 6-31 (249)
252 PRK09291 short chain dehydroge 95.4 0.3 6.5E-06 45.8 12.6 116 97-223 3-132 (257)
253 KOG1429 dTDP-glucose 4-6-dehyd 95.4 0.02 4.4E-07 55.8 4.5 75 96-182 27-101 (350)
254 PF00899 ThiF: ThiF family; I 95.4 0.053 1.2E-06 46.7 6.9 77 96-181 2-101 (135)
255 TIGR01035 hemA glutamyl-tRNA r 95.4 0.043 9.2E-07 56.7 7.3 104 96-228 180-283 (417)
256 PRK05993 short chain dehydroge 95.3 0.055 1.2E-06 52.0 7.6 112 96-223 4-135 (277)
257 PLN02712 arogenate dehydrogena 95.3 0.21 4.6E-06 54.7 12.9 92 95-223 51-144 (667)
258 PRK12826 3-ketoacyl-(acyl-carr 95.3 0.28 6E-06 45.6 12.2 46 96-150 6-51 (251)
259 PRK14806 bifunctional cyclohex 95.3 0.17 3.6E-06 55.9 12.3 95 97-223 4-98 (735)
260 PRK07904 short chain dehydroge 95.3 0.26 5.6E-06 46.8 12.0 118 96-223 8-146 (253)
261 PRK09242 tropinone reductase; 95.3 0.48 1E-05 44.6 13.7 115 96-223 9-147 (257)
262 PRK08277 D-mannonate oxidoredu 95.3 0.32 6.9E-06 46.4 12.6 47 96-151 10-56 (278)
263 PLN02350 phosphogluconate dehy 95.3 0.093 2E-06 55.4 9.5 102 95-224 5-109 (493)
264 PLN02968 Probable N-acetyl-gam 95.2 0.065 1.4E-06 54.8 8.1 27 95-121 37-63 (381)
265 PLN02260 probable rhamnose bio 95.2 0.18 4E-06 54.9 12.1 97 94-221 378-479 (668)
266 PRK06949 short chain dehydroge 95.2 0.27 5.9E-06 46.1 11.9 46 96-150 9-54 (258)
267 PRK08063 enoyl-(acyl carrier p 95.2 0.42 9.1E-06 44.6 13.1 114 96-223 4-141 (250)
268 PRK12829 short chain dehydroge 95.2 0.4 8.8E-06 45.0 13.1 27 95-121 10-36 (264)
269 PRK08219 short chain dehydroge 95.2 0.11 2.3E-06 47.7 8.9 24 96-119 3-26 (227)
270 PRK06940 short chain dehydroge 95.2 0.23 5E-06 47.8 11.5 91 98-200 4-103 (275)
271 PRK06198 short chain dehydroge 95.2 0.39 8.4E-06 45.2 12.8 117 96-223 6-144 (260)
272 PRK08703 short chain dehydroge 95.2 0.33 7.1E-06 45.2 12.2 116 97-223 7-147 (239)
273 PRK06139 short chain dehydroge 95.2 0.3 6.5E-06 48.7 12.6 116 96-222 7-142 (330)
274 PRK07063 short chain dehydroge 95.2 0.34 7.4E-06 45.7 12.4 116 96-224 7-146 (260)
275 TIGR03325 BphB_TodD cis-2,3-di 95.2 0.038 8.2E-07 52.5 5.9 42 95-145 4-45 (262)
276 PLN02253 xanthoxin dehydrogena 95.2 0.1 2.3E-06 49.9 9.0 116 96-223 18-155 (280)
277 PRK05855 short chain dehydroge 95.2 0.2 4.3E-06 52.8 11.8 118 96-223 315-452 (582)
278 PRK07985 oxidoreductase; Provi 95.1 0.29 6.3E-06 47.6 12.1 121 97-224 50-187 (294)
279 PLN02686 cinnamoyl-CoA reducta 95.1 0.071 1.5E-06 53.9 8.0 107 95-211 52-169 (367)
280 PRK09135 pteridine reductase; 95.1 0.15 3.4E-06 47.3 9.8 26 96-121 6-31 (249)
281 PRK06125 short chain dehydroge 95.1 0.49 1.1E-05 44.6 13.4 117 96-223 7-140 (259)
282 cd01487 E1_ThiF_like E1_ThiF_l 95.1 0.085 1.8E-06 47.9 7.7 75 98-181 1-97 (174)
283 TIGR02197 heptose_epim ADP-L-g 95.1 0.086 1.9E-06 51.1 8.3 110 99-223 1-114 (314)
284 PRK12827 short chain dehydroge 95.1 0.46 9.9E-06 44.1 12.9 26 96-121 6-31 (249)
285 PRK05884 short chain dehydroge 95.1 0.095 2.1E-06 48.8 8.3 44 97-149 1-44 (223)
286 PRK05557 fabG 3-ketoacyl-(acyl 95.1 0.5 1.1E-05 43.6 13.1 28 94-121 3-30 (248)
287 PRK05875 short chain dehydroge 95.1 0.4 8.6E-06 45.7 12.7 46 96-150 7-52 (276)
288 PRK12744 short chain dehydroge 95.1 0.4 8.7E-06 45.2 12.6 26 96-121 8-33 (257)
289 PRK06718 precorrin-2 dehydroge 95.1 0.078 1.7E-06 49.4 7.5 102 96-234 10-115 (202)
290 PRK14874 aspartate-semialdehyd 95.1 0.11 2.5E-06 51.9 9.2 72 96-181 1-72 (334)
291 PRK08291 ectoine utilization p 95.1 0.087 1.9E-06 52.7 8.3 74 95-180 131-205 (330)
292 PRK12936 3-ketoacyl-(acyl-carr 95.0 0.11 2.4E-06 48.2 8.5 115 96-225 6-141 (245)
293 PRK07097 gluconate 5-dehydroge 95.0 0.35 7.6E-06 45.9 12.0 119 96-225 10-148 (265)
294 PRK06924 short chain dehydroge 95.0 0.05 1.1E-06 51.0 6.0 26 96-121 1-26 (251)
295 PRK08324 short chain dehydroge 95.0 0.12 2.6E-06 56.6 9.7 116 97-223 423-558 (681)
296 TIGR00873 gnd 6-phosphoglucona 95.0 0.13 2.9E-06 53.9 9.6 101 98-228 1-106 (467)
297 KOG1430 C-3 sterol dehydrogena 94.9 0.073 1.6E-06 53.9 7.3 112 94-211 2-116 (361)
298 PRK08618 ornithine cyclodeamin 94.9 0.081 1.8E-06 52.8 7.6 74 95-180 126-200 (325)
299 cd05311 NAD_bind_2_malic_enz N 94.9 0.25 5.4E-06 46.8 10.5 102 96-227 25-133 (226)
300 PRK07062 short chain dehydroge 94.9 0.52 1.1E-05 44.6 12.9 114 97-223 9-146 (265)
301 PRK08642 fabG 3-ketoacyl-(acyl 94.9 0.17 3.7E-06 47.2 9.4 27 95-121 4-30 (253)
302 PRK12743 oxidoreductase; Provi 94.9 0.65 1.4E-05 43.8 13.4 115 97-224 3-141 (256)
303 PRK12823 benD 1,6-dihydroxycyc 94.9 0.5 1.1E-05 44.5 12.6 26 96-121 8-33 (260)
304 PRK06407 ornithine cyclodeamin 94.9 0.097 2.1E-06 51.8 7.9 75 94-179 115-189 (301)
305 PRK08251 short chain dehydroge 94.9 0.63 1.4E-05 43.4 13.2 76 97-183 3-92 (248)
306 PRK07576 short chain dehydroge 94.9 0.35 7.6E-06 46.0 11.6 46 96-150 9-54 (264)
307 PRK08263 short chain dehydroge 94.8 0.098 2.1E-06 50.1 7.7 113 97-222 4-135 (275)
308 PRK06500 short chain dehydroge 94.8 0.15 3.2E-06 47.6 8.7 103 97-210 7-124 (249)
309 COG1090 Predicted nucleoside-d 94.8 0.12 2.6E-06 50.3 8.1 94 99-211 1-99 (297)
310 PRK06200 2,3-dihydroxy-2,3-dih 94.8 0.11 2.3E-06 49.4 7.8 45 96-149 6-50 (263)
311 PRK08217 fabG 3-ketoacyl-(acyl 94.8 0.51 1.1E-05 43.8 12.3 46 96-150 5-50 (253)
312 PLN02653 GDP-mannose 4,6-dehyd 94.8 0.28 6E-06 48.5 11.1 107 96-211 6-124 (340)
313 PRK06113 7-alpha-hydroxysteroi 94.8 0.41 8.8E-06 45.1 11.7 117 96-223 11-146 (255)
314 PRK06947 glucose-1-dehydrogena 94.8 0.57 1.2E-05 43.7 12.6 46 97-150 3-48 (248)
315 COG0136 Asd Aspartate-semialde 94.8 0.11 2.3E-06 52.0 7.8 73 96-181 1-75 (334)
316 TIGR01963 PHB_DH 3-hydroxybuty 94.7 0.53 1.1E-05 43.9 12.2 74 97-183 2-89 (255)
317 PRK06141 ornithine cyclodeamin 94.7 0.12 2.6E-06 51.3 8.2 73 95-180 124-197 (314)
318 PRK06901 aspartate-semialdehyd 94.7 0.16 3.5E-06 50.6 8.9 69 96-181 3-73 (322)
319 PRK10084 dTDP-glucose 4,6 dehy 94.7 0.1 2.3E-06 51.7 7.8 105 97-211 1-114 (352)
320 PRK05786 fabG 3-ketoacyl-(acyl 94.7 0.31 6.8E-06 45.1 10.5 46 96-150 5-50 (238)
321 PLN02260 probable rhamnose bio 94.7 0.11 2.4E-06 56.6 8.6 114 95-222 5-131 (668)
322 PRK08862 short chain dehydroge 94.7 0.65 1.4E-05 43.5 12.7 118 96-223 5-144 (227)
323 COG0677 WecC UDP-N-acetyl-D-ma 94.7 0.34 7.3E-06 49.5 11.1 75 96-183 9-95 (436)
324 TIGR02992 ectoine_eutC ectoine 94.7 0.12 2.5E-06 51.7 7.9 74 95-180 128-202 (326)
325 PRK05479 ketol-acid reductoiso 94.7 0.15 3.2E-06 51.2 8.6 65 96-180 17-81 (330)
326 TIGR01832 kduD 2-deoxy-D-gluco 94.6 0.59 1.3E-05 43.6 12.4 26 96-121 5-30 (248)
327 PRK12935 acetoacetyl-CoA reduc 94.6 0.53 1.1E-05 43.9 12.0 116 96-223 6-143 (247)
328 PRK07201 short chain dehydroge 94.6 0.39 8.5E-06 51.9 12.6 103 97-211 1-115 (657)
329 PRK09134 short chain dehydroge 94.6 0.49 1.1E-05 44.6 11.8 27 95-121 8-34 (258)
330 PRK06057 short chain dehydroge 94.6 0.15 3.3E-06 48.0 8.3 45 96-149 7-51 (255)
331 KOG1014 17 beta-hydroxysteroid 94.6 0.29 6.3E-06 48.3 10.3 116 99-226 52-190 (312)
332 PRK00258 aroE shikimate 5-dehy 94.6 0.15 3.3E-06 49.6 8.4 74 96-183 123-196 (278)
333 PRK00045 hemA glutamyl-tRNA re 94.5 0.13 2.9E-06 53.1 8.3 106 95-228 181-286 (423)
334 PRK05865 hypothetical protein; 94.5 0.097 2.1E-06 58.7 7.6 113 97-235 1-115 (854)
335 PRK08589 short chain dehydroge 94.5 0.56 1.2E-05 44.9 12.0 116 96-224 6-142 (272)
336 PRK13302 putative L-aspartate 94.5 0.1 2.3E-06 50.7 6.9 72 95-181 5-76 (271)
337 PRK07074 short chain dehydroge 94.4 0.74 1.6E-05 43.2 12.6 44 97-149 3-46 (257)
338 PRK06914 short chain dehydroge 94.4 0.46 1E-05 45.3 11.3 45 97-150 4-48 (280)
339 PRK00436 argC N-acetyl-gamma-g 94.4 0.19 4E-06 50.6 8.8 25 96-120 2-26 (343)
340 PLN02712 arogenate dehydrogena 94.4 0.45 9.7E-06 52.2 12.3 102 95-233 368-471 (667)
341 PRK06179 short chain dehydroge 94.4 0.11 2.4E-06 49.3 6.9 26 96-121 4-29 (270)
342 PRK06077 fabG 3-ketoacyl-(acyl 94.4 0.59 1.3E-05 43.5 11.7 26 96-121 6-31 (252)
343 PRK08416 7-alpha-hydroxysteroi 94.3 0.65 1.4E-05 44.0 12.0 48 96-151 8-55 (260)
344 PRK08664 aspartate-semialdehyd 94.3 0.16 3.4E-06 51.2 8.1 26 96-121 3-28 (349)
345 PRK07340 ornithine cyclodeamin 94.3 0.14 3E-06 50.7 7.5 74 94-181 123-197 (304)
346 cd00757 ThiF_MoeB_HesA_family 94.3 0.2 4.4E-06 47.2 8.4 78 96-182 21-121 (228)
347 PF02423 OCD_Mu_crystall: Orni 94.3 0.12 2.5E-06 51.4 7.0 73 95-179 127-199 (313)
348 PLN00203 glutamyl-tRNA reducta 94.3 0.15 3.3E-06 54.1 8.2 106 96-227 266-374 (519)
349 PF00185 OTCace: Aspartate/orn 94.3 0.23 5E-06 44.4 8.2 77 96-182 2-83 (158)
350 cd01483 E1_enzyme_family Super 94.3 0.55 1.2E-05 40.7 10.4 23 98-121 1-23 (143)
351 PRK07775 short chain dehydroge 94.2 0.65 1.4E-05 44.4 11.9 26 96-121 10-35 (274)
352 cd05312 NAD_bind_1_malic_enz N 94.2 0.045 9.8E-07 53.5 3.7 134 97-253 26-172 (279)
353 PRK07060 short chain dehydroge 94.2 0.29 6.2E-06 45.5 9.1 115 96-223 9-137 (245)
354 PRK06199 ornithine cyclodeamin 94.2 0.17 3.7E-06 51.7 8.1 77 94-179 153-230 (379)
355 PRK06823 ornithine cyclodeamin 94.2 0.2 4.4E-06 49.9 8.4 75 94-180 126-200 (315)
356 PRK06114 short chain dehydroge 94.1 0.5 1.1E-05 44.5 10.7 117 96-223 8-145 (254)
357 PRK08278 short chain dehydroge 94.1 0.75 1.6E-05 44.1 12.1 26 96-121 6-31 (273)
358 PRK05599 hypothetical protein; 94.1 0.57 1.2E-05 44.1 11.1 118 97-225 1-139 (246)
359 PRK08644 thiamine biosynthesis 94.1 0.2 4.4E-06 46.9 7.9 77 96-181 28-126 (212)
360 PRK12475 thiamine/molybdopteri 94.1 0.18 4E-06 50.6 8.0 76 97-181 25-125 (338)
361 TIGR02356 adenyl_thiF thiazole 94.1 0.54 1.2E-05 43.6 10.6 77 96-181 21-120 (202)
362 PRK08628 short chain dehydroge 94.1 1.2 2.5E-05 41.9 13.1 26 96-121 7-32 (258)
363 PRK12742 oxidoreductase; Provi 94.1 0.38 8.2E-06 44.5 9.7 26 96-121 6-31 (237)
364 PRK12320 hypothetical protein; 94.1 0.092 2E-06 57.6 6.2 100 97-222 1-101 (699)
365 PRK06935 2-deoxy-D-gluconate 3 94.1 0.76 1.7E-05 43.3 11.8 26 96-121 15-40 (258)
366 PRK07589 ornithine cyclodeamin 94.0 0.17 3.6E-06 51.1 7.5 74 95-180 128-201 (346)
367 PRK06701 short chain dehydroge 94.0 0.94 2E-05 44.0 12.6 116 96-224 46-183 (290)
368 TIGR01179 galE UDP-glucose-4-e 94.0 0.15 3.3E-06 49.3 7.0 109 98-222 1-120 (328)
369 PRK05872 short chain dehydroge 94.0 0.74 1.6E-05 44.8 11.8 78 96-183 9-96 (296)
370 PRK06719 precorrin-2 dehydroge 93.9 0.22 4.7E-06 44.5 7.3 67 96-181 13-79 (157)
371 PRK07201 short chain dehydroge 93.9 0.6 1.3E-05 50.5 12.2 113 96-223 371-509 (657)
372 TIGR02632 RhaD_aldol-ADH rhamn 93.9 0.19 4.1E-06 55.2 8.3 46 96-150 414-459 (676)
373 PF04321 RmlD_sub_bind: RmlD s 93.9 0.21 4.5E-06 48.8 7.8 98 97-222 1-100 (286)
374 PRK08226 short chain dehydroge 93.9 0.58 1.2E-05 44.2 10.7 26 96-121 6-31 (263)
375 PRK13940 glutamyl-tRNA reducta 93.9 0.11 2.5E-06 53.6 6.2 73 96-183 181-253 (414)
376 PRK12938 acetyacetyl-CoA reduc 93.9 1.2 2.6E-05 41.4 12.7 113 97-223 4-140 (246)
377 PRK08818 prephenate dehydrogen 93.9 0.32 6.8E-06 49.6 9.2 86 96-223 4-89 (370)
378 TIGR01296 asd_B aspartate-semi 93.9 0.23 4.9E-06 50.0 8.1 70 98-181 1-70 (339)
379 smart00859 Semialdhyde_dh Semi 93.8 0.27 5.9E-06 41.4 7.5 23 98-120 1-23 (122)
380 PRK08936 glucose-1-dehydrogena 93.8 1.1 2.4E-05 42.3 12.5 118 96-223 7-145 (261)
381 PRK00048 dihydrodipicolinate r 93.8 1.3 2.9E-05 42.6 13.1 68 96-180 1-68 (257)
382 TIGR00465 ilvC ketol-acid redu 93.8 0.36 7.8E-06 48.1 9.3 66 96-181 3-68 (314)
383 TIGR01692 HIBADH 3-hydroxyisob 93.7 0.19 4.1E-06 49.0 7.2 61 101-181 1-61 (288)
384 PRK07831 short chain dehydroge 93.7 1.3 2.9E-05 41.8 12.7 47 96-151 17-64 (262)
385 PF03435 Saccharop_dh: Sacchar 93.6 0.12 2.6E-06 52.5 5.7 73 99-182 1-77 (386)
386 PRK08300 acetaldehyde dehydrog 93.6 0.96 2.1E-05 44.8 11.9 127 95-261 3-143 (302)
387 COG0373 HemA Glutamyl-tRNA red 93.6 0.33 7.3E-06 50.0 8.9 73 95-183 177-249 (414)
388 TIGR01724 hmd_rel H2-forming N 93.6 0.43 9.3E-06 47.6 9.3 59 108-181 31-90 (341)
389 TIGR00507 aroE shikimate 5-deh 93.6 0.34 7.4E-06 46.9 8.6 73 96-183 117-189 (270)
390 TIGR01470 cysG_Nterm siroheme 93.6 0.36 7.8E-06 45.0 8.4 103 96-234 9-115 (205)
391 PRK07688 thiamine/molybdopteri 93.5 0.27 5.8E-06 49.5 8.0 25 96-121 24-48 (339)
392 TIGR01829 AcAcCoA_reduct aceto 93.5 1.3 2.7E-05 41.0 12.1 117 98-224 2-138 (242)
393 TIGR01850 argC N-acetyl-gamma- 93.5 0.3 6.6E-06 49.2 8.4 25 97-121 1-25 (346)
394 PRK05693 short chain dehydroge 93.5 0.95 2.1E-05 43.1 11.5 26 96-121 1-26 (274)
395 PRK13301 putative L-aspartate 93.5 0.43 9.3E-06 46.4 8.9 95 97-226 3-99 (267)
396 PRK13243 glyoxylate reductase; 93.4 0.18 3.9E-06 50.5 6.6 90 97-222 151-240 (333)
397 PRK12367 short chain dehydroge 93.4 0.47 1E-05 45.1 9.1 101 96-210 14-124 (245)
398 PRK07856 short chain dehydroge 93.3 0.24 5.3E-06 46.5 7.0 26 96-121 6-31 (252)
399 TIGR01809 Shik-DH-AROM shikima 93.3 0.22 4.8E-06 48.7 6.7 75 96-181 125-199 (282)
400 PRK07574 formate dehydrogenase 93.2 0.36 7.9E-06 49.4 8.5 93 97-223 193-285 (385)
401 cd00401 AdoHcyase S-adenosyl-L 93.2 0.34 7.4E-06 50.1 8.3 90 96-224 202-291 (413)
402 TIGR01289 LPOR light-dependent 93.2 1.5 3.2E-05 43.2 12.6 119 97-223 4-143 (314)
403 PRK05690 molybdopterin biosynt 93.2 0.39 8.5E-06 46.0 8.2 77 96-181 32-131 (245)
404 PRK05854 short chain dehydroge 93.2 1.7 3.6E-05 42.8 13.0 114 96-223 14-150 (313)
405 TIGR01746 Thioester-redct thio 93.2 1.3 2.7E-05 43.5 12.1 108 98-211 1-126 (367)
406 PRK08264 short chain dehydroge 93.1 0.34 7.4E-06 44.9 7.6 26 96-121 6-31 (238)
407 COG1091 RfbD dTDP-4-dehydrorha 93.1 0.26 5.6E-06 48.3 6.9 95 97-222 1-99 (281)
408 PF00106 adh_short: short chai 93.1 1.3 2.9E-05 38.4 10.9 115 98-226 2-138 (167)
409 PRK15059 tartronate semialdehy 93.0 0.18 4E-06 49.5 5.8 63 97-180 1-63 (292)
410 PRK11863 N-acetyl-gamma-glutam 93.0 0.54 1.2E-05 46.8 9.1 26 96-121 2-27 (313)
411 PRK08177 short chain dehydroge 93.0 0.21 4.5E-06 46.3 5.8 26 96-121 1-26 (225)
412 PRK07889 enoyl-(acyl carrier p 92.9 0.71 1.5E-05 43.8 9.6 80 97-183 8-96 (256)
413 PRK12557 H(2)-dependent methyl 92.9 0.9 1.9E-05 45.8 10.7 84 109-222 32-116 (342)
414 PRK15469 ghrA bifunctional gly 92.9 0.26 5.7E-06 49.0 6.7 91 96-222 136-226 (312)
415 KOG1201 Hydroxysteroid 17-beta 92.9 1 2.2E-05 44.4 10.6 117 96-223 38-173 (300)
416 PRK12824 acetoacetyl-CoA reduc 92.9 2 4.3E-05 39.7 12.3 25 97-121 3-27 (245)
417 TIGR00936 ahcY adenosylhomocys 92.8 0.47 1E-05 49.0 8.6 91 95-224 194-284 (406)
418 PRK05476 S-adenosyl-L-homocyst 92.8 0.43 9.3E-06 49.5 8.3 93 95-226 211-303 (425)
419 COG1064 AdhP Zn-dependent alco 92.7 1.5 3.3E-05 44.1 11.8 127 95-261 166-301 (339)
420 PRK06153 hypothetical protein; 92.7 0.24 5.3E-06 50.5 6.3 58 72-136 149-209 (393)
421 cd01492 Aos1_SUMO Ubiquitin ac 92.7 0.38 8.3E-06 44.5 7.2 25 96-121 21-45 (197)
422 PRK06046 alanine dehydrogenase 92.7 0.39 8.4E-06 47.9 7.6 74 95-180 128-201 (326)
423 PRK08306 dipicolinate synthase 92.6 0.46 9.9E-06 46.8 8.0 67 96-180 152-218 (296)
424 PRK06720 hypothetical protein; 92.6 1.3 2.8E-05 39.9 10.4 80 95-184 15-105 (169)
425 PRK09009 C factor cell-cell si 92.6 0.17 3.7E-06 46.9 4.8 24 97-120 1-24 (235)
426 PLN02494 adenosylhomocysteinas 92.6 0.41 8.8E-06 50.2 7.9 95 96-229 254-348 (477)
427 PRK14106 murD UDP-N-acetylmura 92.5 0.45 9.8E-06 49.1 8.2 112 96-226 5-118 (450)
428 PRK08223 hypothetical protein; 92.4 0.65 1.4E-05 45.7 8.6 25 96-121 27-51 (287)
429 PRK09730 putative NAD(P)-bindi 92.4 1.6 3.4E-05 40.5 11.0 47 96-150 1-47 (247)
430 PRK12481 2-deoxy-D-gluconate 3 92.4 0.46 9.9E-06 44.9 7.5 26 96-121 8-33 (251)
431 PLN03139 formate dehydrogenase 92.4 0.51 1.1E-05 48.4 8.2 93 96-222 199-291 (386)
432 TIGR00978 asd_EA aspartate-sem 92.4 0.57 1.2E-05 47.1 8.4 25 97-121 1-25 (341)
433 PRK06484 short chain dehydroge 92.3 0.38 8.3E-06 50.5 7.5 118 96-224 269-402 (520)
434 TIGR02853 spore_dpaA dipicolin 92.3 0.41 9E-06 47.0 7.2 67 96-180 151-217 (287)
435 COG3967 DltE Short-chain dehyd 92.3 1.3 2.8E-05 41.7 9.9 115 97-223 6-139 (245)
436 COG4007 Predicted dehydrogenas 92.3 1.5 3.3E-05 42.4 10.6 99 96-228 1-120 (340)
437 cd01491 Ube1_repeat1 Ubiquitin 92.3 0.77 1.7E-05 45.2 9.0 75 97-180 20-113 (286)
438 cd01075 NAD_bind_Leu_Phe_Val_D 92.3 0.51 1.1E-05 43.8 7.4 65 96-180 28-93 (200)
439 PRK08993 2-deoxy-D-gluconate 3 92.2 2.6 5.7E-05 39.6 12.5 26 96-121 10-35 (253)
440 PRK06463 fabG 3-ketoacyl-(acyl 92.2 0.77 1.7E-05 43.2 8.8 26 96-121 7-32 (255)
441 PRK13303 L-aspartate dehydroge 92.2 1.2 2.5E-05 43.2 10.1 69 96-181 1-70 (265)
442 PRK14194 bifunctional 5,10-met 92.1 0.34 7.5E-06 47.9 6.3 75 96-224 159-234 (301)
443 PRK06841 short chain dehydroge 92.1 0.68 1.5E-05 43.4 8.2 26 96-121 15-40 (255)
444 COG2423 Predicted ornithine cy 92.1 0.5 1.1E-05 47.4 7.6 74 95-179 129-202 (330)
445 cd01485 E1-1_like Ubiquitin ac 92.1 0.56 1.2E-05 43.4 7.4 24 97-121 20-43 (198)
446 TIGR02355 moeB molybdopterin s 92.1 0.55 1.2E-05 44.9 7.5 25 96-121 24-48 (240)
447 TIGR02685 pter_reduc_Leis pter 92.1 3 6.5E-05 39.5 12.7 46 97-150 2-47 (267)
448 PRK06484 short chain dehydroge 92.0 0.46 1E-05 49.9 7.6 116 96-223 5-141 (520)
449 PRK07792 fabG 3-ketoacyl-(acyl 92.0 1.5 3.3E-05 42.9 10.8 76 96-184 12-101 (306)
450 COG0078 ArgF Ornithine carbamo 91.9 0.87 1.9E-05 44.9 8.7 114 95-219 152-267 (310)
451 TIGR01830 3oxo_ACP_reduc 3-oxo 91.9 1.2 2.6E-05 40.9 9.5 117 99-224 1-136 (239)
452 PF05368 NmrA: NmrA-like famil 91.9 0.38 8.3E-06 44.8 6.2 69 99-182 1-74 (233)
453 PLN02858 fructose-bisphosphate 91.8 0.64 1.4E-05 55.1 9.1 68 94-181 322-389 (1378)
454 PF02826 2-Hacid_dh_C: D-isome 91.8 0.46 1E-05 43.0 6.4 93 96-224 36-129 (178)
455 PRK09496 trkA potassium transp 91.8 0.55 1.2E-05 48.4 7.8 68 97-181 1-74 (453)
456 TIGR03693 ocin_ThiF_like putat 91.8 0.84 1.8E-05 49.2 9.2 81 95-183 128-215 (637)
457 PRK12745 3-ketoacyl-(acyl-carr 91.8 3.1 6.6E-05 38.9 12.3 25 97-121 3-27 (256)
458 PLN02928 oxidoreductase family 91.8 0.38 8.1E-06 48.6 6.4 103 97-223 160-263 (347)
459 PRK08605 D-lactate dehydrogena 91.8 0.29 6.3E-06 49.0 5.5 63 96-180 146-208 (332)
460 PRK06523 short chain dehydroge 91.7 0.27 5.8E-06 46.3 5.0 25 97-121 10-34 (260)
461 TIGR01831 fabG_rel 3-oxoacyl-( 91.6 2.3 4.9E-05 39.4 11.0 45 99-151 1-45 (239)
462 PRK08762 molybdopterin biosynt 91.5 0.64 1.4E-05 47.3 7.8 77 96-181 135-234 (376)
463 TIGR03649 ergot_EASG ergot alk 91.5 0.16 3.5E-06 48.9 3.3 24 98-121 1-24 (285)
464 PRK06953 short chain dehydroge 91.4 1.8 3.9E-05 39.8 10.1 26 96-121 1-26 (222)
465 PRK14027 quinate/shikimate deh 91.4 0.48 1E-05 46.5 6.5 74 96-180 127-202 (283)
466 PRK08303 short chain dehydroge 91.3 2.8 6.1E-05 41.2 11.9 25 97-121 9-33 (305)
467 PTZ00075 Adenosylhomocysteinas 91.3 0.54 1.2E-05 49.4 7.1 90 96-224 254-343 (476)
468 PLN02996 fatty acyl-CoA reduct 91.3 3 6.4E-05 44.1 12.8 42 168-210 108-149 (491)
469 PF02254 TrkA_N: TrkA-N domain 91.2 0.55 1.2E-05 38.8 5.9 91 99-223 1-97 (116)
470 PLN03129 NADP-dependent malic 91.2 0.22 4.8E-06 53.2 4.2 133 97-254 322-469 (581)
471 COG0002 ArgC Acetylglutamate s 91.1 0.45 9.8E-06 47.7 6.0 27 95-121 1-27 (349)
472 TIGR03736 PRTRC_ThiF PRTRC sys 91.1 3.5 7.5E-05 39.7 11.8 28 92-120 7-34 (244)
473 PF03949 Malic_M: Malic enzyme 91.1 1.2 2.5E-05 43.2 8.6 130 97-251 26-171 (255)
474 PRK05597 molybdopterin biosynt 90.9 0.59 1.3E-05 47.3 6.8 77 96-181 28-127 (355)
475 PRK07791 short chain dehydroge 90.9 4.3 9.3E-05 39.2 12.6 26 96-121 6-31 (286)
476 PRK05562 precorrin-2 dehydroge 90.8 2.4 5.2E-05 40.2 10.3 103 96-234 25-131 (223)
477 KOG1203 Predicted dehydrogenas 90.8 0.89 1.9E-05 46.8 7.9 30 92-121 75-104 (411)
478 cd00762 NAD_bind_malic_enz NAD 90.7 0.35 7.5E-06 46.7 4.6 134 97-254 26-174 (254)
479 PRK06123 short chain dehydroge 90.5 4.4 9.6E-05 37.6 11.9 24 98-121 4-27 (248)
480 PLN00015 protochlorophyllide r 90.4 4.1 8.8E-05 39.8 12.1 115 101-223 2-137 (308)
481 cd01079 NAD_bind_m-THF_DH NAD 90.4 0.6 1.3E-05 43.4 5.7 76 96-183 62-137 (197)
482 PRK07578 short chain dehydroge 90.3 1 2.2E-05 40.7 7.2 23 97-119 1-23 (199)
483 PRK06398 aldose dehydrogenase; 90.2 0.94 2E-05 42.9 7.1 25 97-121 7-31 (258)
484 COG5322 Predicted dehydrogenas 90.1 0.71 1.5E-05 44.9 6.1 103 97-231 168-270 (351)
485 KOG1208 Dehydrogenases with di 90.1 3.7 8.1E-05 40.9 11.5 115 96-223 35-171 (314)
486 PRK08220 2,3-dihydroxybenzoate 90.0 2.8 6.1E-05 39.0 10.2 26 96-121 8-33 (252)
487 PF01408 GFO_IDH_MocA: Oxidore 90.0 0.53 1.2E-05 39.0 4.7 68 97-181 1-71 (120)
488 TIGR01851 argC_other N-acetyl- 90.0 1.5 3.3E-05 43.5 8.6 25 97-121 2-26 (310)
489 PRK08261 fabG 3-ketoacyl-(acyl 89.9 1.6 3.4E-05 45.2 9.0 117 96-223 210-343 (450)
490 PRK09424 pntA NAD(P) transhydr 89.9 1.9 4E-05 45.9 9.6 105 95-224 164-287 (509)
491 KOG2666 UDP-glucose/GDP-mannos 89.8 0.98 2.1E-05 44.9 6.9 82 96-185 1-91 (481)
492 PRK13535 erythrose 4-phosphate 89.8 0.89 1.9E-05 45.7 6.8 25 96-121 1-25 (336)
493 KOG4777 Aspartate-semialdehyde 89.8 0.24 5.2E-06 47.7 2.6 79 97-181 4-86 (361)
494 PRK07984 enoyl-(acyl carrier p 89.8 3.6 7.7E-05 39.4 10.9 25 97-121 7-33 (262)
495 PRK08415 enoyl-(acyl carrier p 89.7 1.2 2.7E-05 42.9 7.6 26 96-121 5-32 (274)
496 PRK00257 erythronate-4-phospha 89.6 0.69 1.5E-05 47.3 6.0 60 96-180 116-175 (381)
497 PRK06483 dihydromonapterin red 89.6 1.8 4E-05 40.0 8.5 25 97-121 3-27 (236)
498 PRK07041 short chain dehydroge 89.6 3.9 8.4E-05 37.6 10.6 110 101-222 2-123 (230)
499 PRK03562 glutathione-regulated 89.5 6.6 0.00014 42.8 13.9 136 97-271 401-542 (621)
500 PRK12749 quinate/shikimate deh 89.5 2.1 4.5E-05 42.1 9.1 73 96-180 124-204 (288)
No 1
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=100.00 E-value=1.1e-95 Score=742.28 Aligned_cols=393 Identities=80% Similarity=1.231 Sum_probs=368.8
Q ss_pred eeeeeecCCC-----ccccceeccccccccccccCccccccCCCCCCCCCCeeEEEeccc-ccccccccCCCCCCCCCcc
Q 015897 2 AVVAQLSPSS-----YTETTRLSSSQLSLSSTHLSSLRRRAFRPIIGPRNPTISCSVNQV-QAPVAVEQDDPKSKTNDCY 75 (398)
Q Consensus 2 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 75 (398)
++||+++++. .+++++++++|+++++++++.|+|+.|+|++|.++++|+|||+++ |+|+++++++++.| +|||
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 79 (444)
T PLN00112 1 MAVAELSTPKVTSPFLNTSSRLRSSQLGLSRTHLSNHFRRALLPRRRATNARISCSVNQASQAPAAVQEKGVKTK-KECY 79 (444)
T ss_pred CcchhccccccccccccchhhccccccccccccccccccccccccccccccceeeccccccCCCccccccccccC-CCce
Confidence 3577777664 568889999999999999999999999999999999999999999 88888888887666 9999
Q ss_pred eeeEEeeccchhHhhhhccCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCC
Q 015897 76 GVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFP 155 (398)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~ 155 (398)
||||++||+++|+..+.|+++.||+||||+|+||+++++.|+.+++++.+|++.++|+++|+++++++|++|||+|+.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~ 159 (444)
T PLN00112 80 GVFCLTYDLKAEEETKSWKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYP 159 (444)
T ss_pred EEEEEEEecccchhhhcCCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhh
Confidence 99999999999999999999999999997799999999999999999988888888888999999999999999999877
Q ss_pred CcceEEEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHH
Q 015897 156 LLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKN 235 (398)
Q Consensus 156 ~~~~v~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~ 235 (398)
++.++.+++++|++++|||+||+++|.||+|||+|.|++..|++|++++++.|+++++|+++||++|||||+||++++++
T Consensus 160 ~~~~v~i~~~~ye~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~~k~ 239 (444)
T PLN00112 160 LLREVSIGIDPYEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALICLKN 239 (444)
T ss_pred hcCceEEecCCHHHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHHHHH
Confidence 76678888899999999999999999999999999999999999999999999995479999999999999999999999
Q ss_pred CCCCCCceEEecCchhHHHHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhcccccccHHHHHHHH
Q 015897 236 APSIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETI 315 (398)
Q Consensus 236 ~~~~~~kvig~gt~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v 315 (398)
++.+++|+||+||.||++|++++||+++|+++++|+++|||||||++|||+||+++|+|+|+.+++++++|+.++|.+++
T Consensus 240 sg~~~~rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGdsqvp~wS~a~V~G~pl~e~i~~~~~~~~ei~~~v 319 (444)
T PLN00112 240 APNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKINGLPVKEVITDHKWLEEEFTPKV 319 (444)
T ss_pred cCCCCcceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCCceeeccceeEECCccHHHhhccccchHHHHHHHH
Confidence 97666699999999999999999999999999999777999999999999999999999999999887778889999999
Q ss_pred HhhhHHHHHhcCCCcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEee-ccC
Q 015897 316 QKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMV-IMN 394 (398)
Q Consensus 316 ~~~~~~ii~~~G~t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~-~l~ 394 (398)
+++|++|+++||+++|+++|.+++++|++|+.|+|+++|+|+|++++|++||+++|++||+||++|++|+ ++++ +|+
T Consensus 320 ~~~g~~Ii~~kG~t~~~s~a~ai~~~I~ail~~~d~~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv--~~Iv~el~ 397 (444)
T PLN00112 320 QKRGGVLIKKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGD--YEIVKDVE 397 (444)
T ss_pred HHHHHHHHhccCchhHHHHHHHHHHHHHHHHcCCCCCeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCee--EEECCCCC
Confidence 9999999999999999899999999999999888999999999999995599989999999999999999 8999 699
Q ss_pred CCC
Q 015897 395 LSR 397 (398)
Q Consensus 395 L~~ 397 (398)
|++
T Consensus 398 L~~ 400 (444)
T PLN00112 398 IDD 400 (444)
T ss_pred CCH
Confidence 985
No 2
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=100.00 E-value=5.2e-81 Score=626.43 Aligned_cols=339 Identities=76% Similarity=1.213 Sum_probs=315.9
Q ss_pred ccccccccccCCCCCCCCCcceeeEEeeccchhHhh--hhccCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEe
Q 015897 55 QVQAPVAVEQDDPKSKTNDCYGVFCLTYDLKAEEET--KSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKL 132 (398)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L 132 (398)
..|+|+.|.|++++.. ++||||||++||+++|.++ +.|+++.||+||||+|+||+++++.|+.+++++++++|.|+|
T Consensus 2 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L 80 (387)
T TIGR01757 2 AKQVQAGVATAEAAAT-KKCYGVFCLSYDLKNEDKSLTKSWKKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKL 80 (387)
T ss_pred chhhhcccchhhHHhh-hcceEEEEEEeecCcchhHHHhcCCCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEE
Confidence 3578888777777764 8999999999999999874 678889999999977999999999999999999888899999
Q ss_pred cccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhc
Q 015897 133 LGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVA 212 (398)
Q Consensus 133 ~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a 212 (398)
+|+|+++++++|+++||+|+.++++.++++++++|++++|||+||+++|.||+||++|.|++..|++|++++++.|++++
T Consensus 81 ~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~y~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a 160 (387)
T TIGR01757 81 LGSERSKEALEGVAMELEDSLYPLLREVSIGIDPYEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVA 160 (387)
T ss_pred eccCccchhhhHHHHHHHHhhhhhcCceEEecCCHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999877666777888999999999999999999999999999999999999999999999986
Q ss_pred CCCeEEEEECCCchhHHHHHHHHCCCCCCceEEecCchhHHHHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEE
Q 015897 213 SRNVKVIVVGNPCNTNALICLKNAPSIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARI 292 (398)
Q Consensus 213 ~p~a~vIvvtNP~d~~t~~~~k~~~~~~~kvig~gt~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I 292 (398)
+|++++|++|||+|+||++++++++.+|+|+||+||.||++|++++||+++++++++|+++|||||||++|||+||+++|
T Consensus 161 ~~~~iviVVsNPvDv~t~v~~k~sg~~~~rviG~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGds~vp~~S~a~V 240 (387)
T TIGR01757 161 SKNCKVLVVGNPCNTNALIAMKNAPNIPRKNFHALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHSTTQVPDFVNAKI 240 (387)
T ss_pred CCCeEEEEcCCcHHHHHHHHHHHcCCCcccEEEecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCCcEEecceeeEE
Confidence 79999999999999999999999966666999999999999999999999999999997669999999999999999999
Q ss_pred cCccchhhcccccccHHHHHHHHHhhhHHHHHhcCCCcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCcc-CCCCCc
Q 015897 293 NGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNP-YGIAED 371 (398)
Q Consensus 293 ~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~~G~t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~-ygip~d 371 (398)
+|+|+.+++++.+|+.++|.++++++|++|++.||+++|+++|.+++++|++|+.|+|+++|+|+|++++| + ||+|+|
T Consensus 241 ~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~~KG~t~~~s~a~ai~~~i~ai~~g~d~~~il~vsv~~~G-e~YGi~~g 319 (387)
T TIGR01757 241 GGRPAKEVIKDTKWLEEEFTPTVQKRGGALIKKWGRSSAASTAVSIADAIKSLVVPTPEGDWFSTGVYTDG-NPYGIAEG 319 (387)
T ss_pred CCEEhHHhcccccchHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhcCCCCCeEEEEEEEeCC-cccCCCCC
Confidence 99999998877677788999999999999999999999988999999999999988899999999999999 6 999899
Q ss_pred eEEEEeEEEcCCCceeeEee-ccCCCC
Q 015897 372 IVFSMPCRSKKVTSVCREMV-IMNLSR 397 (398)
Q Consensus 372 v~~svP~~ig~~Gv~~~~i~-~l~L~~ 397 (398)
++||+||++|++|+ ++++ +|+|++
T Consensus 320 v~~S~Pvvig~~Gv--~~Iv~~l~L~~ 344 (387)
T TIGR01757 320 LVFSMPCRSKGDGD--YELATDVSMDD 344 (387)
T ss_pred EEEEEEEEEeCCEE--EEECCCCCCCH
Confidence 99999999999999 8885 999975
No 3
>PRK05442 malate dehydrogenase; Provisional
Probab=100.00 E-value=9.5e-68 Score=522.82 Aligned_cols=298 Identities=53% Similarity=0.849 Sum_probs=270.7
Q ss_pred ccCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCC
Q 015897 93 WKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFED 172 (398)
Q Consensus 93 ~~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~d 172 (398)
|++++||+||||+|+||+++++.|+.+++++.++++.|+|+|+..++++++|+++||+|+.+++..++++++++|++++|
T Consensus 1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~d 80 (326)
T PRK05442 1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKD 80 (326)
T ss_pred CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCC
Confidence 56789999999779999999999999999985556778887765566789999999999986665567788899999999
Q ss_pred CcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchh
Q 015897 173 AEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLD 251 (398)
Q Consensus 173 ADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lD 251 (398)
||+||+++|.||+||++|+|++..|++|+++++++|+++++|++++|++|||+|++|+++++++|++|+ |+||+ |.||
T Consensus 81 aDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~-t~LD 159 (326)
T PRK05442 81 ADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIAMKNAPDLPAENFTAM-TRLD 159 (326)
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHHHHHcCCCCHHHEEee-eHHH
Confidence 999999999999999999999999999999999999998668999999999999999999999989998 78899 9999
Q ss_pred HHHHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHHHhcCCCcH
Q 015897 252 ENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKKWGRSSA 331 (398)
Q Consensus 252 s~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~~G~t~~ 331 (398)
++||+++||+++++++++|++++||||||++|||+||+++|+|+|+.+++.+++|..+++.+++++++++|++.||+++|
T Consensus 160 s~R~r~~la~~l~v~~~~V~~~vV~GeHG~s~~~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~t~~ 239 (326)
T PRK05442 160 HNRALSQLAAKAGVPVADIKKMTVWGNHSATQYPDFRHATIDGKPAAEVINDQAWLEDTFIPTVQKRGAAIIEARGASSA 239 (326)
T ss_pred HHHHHHHHHHHhCcChHHeEEeEEEECCcCceeeccccCEECCEEHHHHccchhhHHHHHHHHHHhhHHHHHhCcCCccH
Confidence 99999999999999999999855699999999999999999999999988776677789999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCC--CCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeec-cCCCC
Q 015897 332 ASTAVSIVDAMKSLVTPTP--EGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVI-MNLSR 397 (398)
Q Consensus 332 ~s~A~~I~~aI~~~~~~~~--~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~-l~L~~ 397 (398)
+..+..+++.+++|+ ++ +++++|+|++++| +||+|+|++||+||++| +|+ +++++ ++|++
T Consensus 240 ~~a~~~~~~iv~ail--~~~~~~~i~~~sv~~~g-~ygi~~~v~~s~P~~ig-~Gv--~~iv~~l~L~~ 302 (326)
T PRK05442 240 ASAANAAIDHVRDWV--LGTPEGDWVSMGVPSDG-SYGIPEGLIFGFPVTCE-NGE--YEIVQGLEIDD 302 (326)
T ss_pred HHHHHHHHHHHHHHH--hCCCCCeEEEEEEEecC-ccCCcCCeEEEEEEEEc-CcE--EEEeCCCCCCH
Confidence 755544678888878 56 8999999999999 89999999999999999 999 77755 88875
No 4
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=8.2e-68 Score=515.19 Aligned_cols=284 Identities=29% Similarity=0.442 Sum_probs=259.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec-CcccccCCCcE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI-NPYELFEDAEW 175 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~-~~~eal~dADi 175 (398)
+||+|||| |+||+++++.|+..++..+ +.| + |+++++++|.++||.|+.+....++.++. ++|++++|||+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~e---l~L--i--Di~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDi 72 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSE---LVL--I--DINEEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADI 72 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccce---EEE--E--EcccccccchhcchhhcchhccCceEEecCCChhhhcCCCE
Confidence 59999997 9999999999977766433 444 4 66789999999999999865556677766 67999999999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHHH
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDENR 254 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~R 254 (398)
||+++|.||||||+|+||+..|++|++++++++.++ +||++++++|||+|+|||++|+++ ++|+ |+||++|.||++|
T Consensus 73 VvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~-~~d~ivlVvtNPvD~~ty~~~k~s-g~p~~rvig~gt~LDsaR 150 (313)
T COG0039 73 VVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY-APDAIVLVVTNPVDILTYIAMKFS-GFPKNRVIGSGTVLDSAR 150 (313)
T ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCeEEEEecCcHHHHHHHHHHhc-CCCccceecccchHHHHH
Confidence 999999999999999999999999999999999999 699999999999999999999999 5676 7899999999999
Q ss_pred HHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhcc-cccccHHHHHHHHHhhhHHHHHhcCCCcHHH
Q 015897 255 AKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIK-DHKWLEEGFTETIQKRGGLLIKKWGRSSAAS 333 (398)
Q Consensus 255 l~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~-~~~~~~~el~~~v~~~~~~ii~~~G~t~~~s 333 (398)
|+++||+++|+++++|+. ||+||||++|||+||+++|+|+|+.++++ .+.|..+++.++++++|++|++.||++++.+
T Consensus 151 ~~~~lae~~~v~~~~V~~-~ViGeHGdt~vp~~S~a~v~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~kG~~t~~~ 229 (313)
T COG0039 151 FRTFLAEKLGVSPKDVHA-YVIGEHGDTMVPLWSQATVGGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAKGAGTYYG 229 (313)
T ss_pred HHHHHHHHhCCChhHcee-eEeccCCCceEEeeeeeeECCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHccCccchhh
Confidence 999999999999999997 99999999999999999999999999988 5667788999999999999999998744556
Q ss_pred HHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 334 TAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 334 ~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
+|.+++++.++|+ .|+++|+|+|+|++| +||+ +|+|||+||++|++|+ +++++++|++
T Consensus 230 ~A~a~a~~~~ail--~d~~~vl~~s~~l~G-~yg~-~dv~~gvP~~lg~~Gv--~~iie~~l~~ 287 (313)
T COG0039 230 PAAALARMVEAIL--RDEKRVLPVSVYLDG-EYGV-EDVYFGVPAVLGKNGV--EEILELLLSD 287 (313)
T ss_pred HHHHHHHHHHHHH--cCCCceEEEEEeecC-ccCc-CCeEEEeeEEEcCCCc--EEEecCCCCH
Confidence 8999999999999 789999999999999 7995 8999999999999999 9999999985
No 5
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=100.00 E-value=1.7e-67 Score=520.45 Aligned_cols=298 Identities=57% Similarity=0.874 Sum_probs=271.6
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCC
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDA 173 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dA 173 (398)
|++.||+||||+|+||+++++.|+.+++++.++.+.|+|+|+..+.++++|+++||+|+.+++..++.++.++|++++||
T Consensus 1 ~~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~da 80 (323)
T TIGR01759 1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDV 80 (323)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCC
Confidence 46889999997799999999999999998855556777776544557799999999999866655667778999999999
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCC-CeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchh
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASR-NVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLD 251 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p-~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lD 251 (398)
|+||+|+|.||+|||+|+|++..|++|+++++++|+++ +| ++++|++|||+|+||+++++.++++|+ |+||+ |.||
T Consensus 81 DvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~-~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~-t~LD 158 (323)
T TIGR01759 81 DAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV-AKKDVKVLVVGNPANTNALIASKNAPDIPPKNFSAM-TRLD 158 (323)
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEe-eHHH
Confidence 99999999999999999999999999999999999999 57 999999999999999999999878998 78887 9999
Q ss_pred HHHHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHHHhcCCCcH
Q 015897 252 ENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKKWGRSSA 331 (398)
Q Consensus 252 s~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~~G~t~~ 331 (398)
++||+++||+++|+++++|++.+||||||++|||+||+++|+|+|+.+++.++.|+.+++.+++++++++|++.||+++|
T Consensus 159 s~R~r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~t~~ 238 (323)
T TIGR01759 159 HNRAKYQLAAKAGVPVSDVKNVIIWGNHSNTQVPDFTHATVDGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIEARGASSA 238 (323)
T ss_pred HHHHHHHHHHHhCcChHHeEEeEEEecCCCceeeccccCEECCccHHHHhcchhhHHHHHHHHHHhhHHHHHhccCCcch
Confidence 99999999999999999998767999999999999999999999999988775566789999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCC--CcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeec-cCCCC
Q 015897 332 ASTAVSIVDAMKSLVTPTPE--GDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVI-MNLSR 397 (398)
Q Consensus 332 ~s~A~~I~~aI~~~~~~~~~--~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~-l~L~~ 397 (398)
++.|.++++.+++|+ +|+ ++++|+|+|++|++||+|+|+|||+||++|++|+ +++++ ++|++
T Consensus 239 ~~~a~a~~~iv~ail--~~~~~~~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv--~~iv~~l~L~~ 303 (323)
T TIGR01759 239 ASAANAAIDHVRDWV--TGTPEGDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGE--WEIVEGLPLDD 303 (323)
T ss_pred HHHHHHHHHHHHHHH--cCCCCCcEEEEEEEeCCcccCCCCCeEEEEEEEEcCCee--EEEcCCCCCCH
Confidence 778888899999888 666 9999999999995699999999999999999999 88999 99985
No 6
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.1e-66 Score=529.84 Aligned_cols=304 Identities=31% Similarity=0.444 Sum_probs=277.7
Q ss_pred chhHhh-hhccCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe
Q 015897 85 KAEEET-KSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG 163 (398)
Q Consensus 85 ~~~~~~-~~~~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~ 163 (398)
++|+++ +.++++.+|+|+||+|++|++|++.|+++.+||.||+|.|+|+|++.++++++|++|||+|++++++..+.++
T Consensus 111 ~~e~~~~~~~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~ 190 (452)
T cd05295 111 EKEEEELRSKINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT 190 (452)
T ss_pred HHHHHHHhcCCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE
Confidence 444443 5577789999999999999999999999999999999999998776689999999999999998887778888
Q ss_pred cCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCC--CeEEEEECCCchhHHHHHHHHCCCCCC
Q 015897 164 INPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASR--NVKVIVVGNPCNTNALICLKNAPSIPA 241 (398)
Q Consensus 164 ~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p--~a~vIvvtNP~d~~t~~~~k~~~~~~~ 241 (398)
+++|++|+|||+||+++|.||+|||+|.|++..|++|+++++++|+++| | ++++|++|||||++|+++++++|++|+
T Consensus 191 ~~~~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a-~~~~~VlVv~tNPvD~~t~i~~k~apgiP~ 269 (452)
T cd05295 191 TDLDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNA-KEDVKVIVAGRTFLNLKTSILIKYAPSIPR 269 (452)
T ss_pred ECCHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEeCCcHHHHHHHHHHHcCCCCH
Confidence 9999999999999999999999999999999999999999999999995 7 899999999999999999999999998
Q ss_pred -ceEEecCchhHHHHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcC------------ccchhhcccccccH
Q 015897 242 -KNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARING------------LPVKEIIKDHKWLE 308 (398)
Q Consensus 242 -kvig~gt~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G------------~p~~~~i~~~~~~~ 308 (398)
|+||++| ||++|++++||+++|+++++|++++||||||++|||+||+++|+| +|+.+++.+++|..
T Consensus 270 ~rVig~gt-lds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~~w~~ 348 (452)
T cd05295 270 KNIIAVAR-LQENRAKALLARKLNVNSAGIKDVIVWGNIGGNTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWIN 348 (452)
T ss_pred HHEEEecc-hHHHHHHHHHHHHhCcCHHHceeeEEEEccCCceeeeeeEEEEcccccccccccccCccHHHHhcchhhhH
Confidence 6788888 779999999999999999999888999999999999999999988 99999887777888
Q ss_pred HHHHHHHHhhhHHHHHhcCCCcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceee
Q 015897 309 EGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCR 388 (398)
Q Consensus 309 ~el~~~v~~~~~~ii~~~G~t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~ 388 (398)
+++.+.+++++. +++|.| ++++|.++++++++|+.++++++|+|+||+++| +||+|+|++||+||+++++|+ +
T Consensus 349 ~~~~~~v~~rg~---~rkgsT-~~siA~A~~~iv~ail~~t~~~~ilsvsv~sdG-~YGip~gv~~S~Pviig~~Gv--e 421 (452)
T cd05295 349 GEFVATLKSLSS---SLNHEA-AISPAHAIATTLSYWYHGSPPGEIFSLGVISEG-WYGIPEGIVFSMPVKFQNGSW--E 421 (452)
T ss_pred HHHHHHHHHHHH---hccCCh-HHHHHHHHHHHHHHHHhCCCCCeEEEEEEeecc-ccCCcCCEEEEEEEEEeCCeE--E
Confidence 899999999998 455554 456999999999999955445899999999999 899999999999999999999 8
Q ss_pred EeeccCCCC
Q 015897 389 EMVIMNLSR 397 (398)
Q Consensus 389 ~i~~l~L~~ 397 (398)
.+.+|+|++
T Consensus 422 ~V~~L~L~e 430 (452)
T cd05295 422 VVTDLELSE 430 (452)
T ss_pred EEeCCCCCH
Confidence 899999985
No 7
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=4.2e-66 Score=475.99 Aligned_cols=301 Identities=50% Similarity=0.726 Sum_probs=288.9
Q ss_pred ccCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCC
Q 015897 93 WKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFED 172 (398)
Q Consensus 93 ~~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~d 172 (398)
|+++++|.|.||+|+||+++++.|+.+.+|++||||.|+|+|+....+.|+|+.|+|+|+++|++..+..+++..++|+|
T Consensus 1 ~~epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~PlL~~Vvattd~~~afkd 80 (332)
T KOG1496|consen 1 MKEPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCALPLLKGVVATTDEVEAFKD 80 (332)
T ss_pred CCCceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhhhHHHhhhcccChhhhhcc
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCCceEEecCchhH
Q 015897 173 AEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPAKNFHALTRLDE 252 (398)
Q Consensus 173 ADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~kvig~gt~lDs 252 (398)
.|+.|+.|+.||++||+|.|++..|.+|++.+++++++||+|+++||+++||+|+++.++.+++|.+|.++|.+.|+||.
T Consensus 81 v~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~k~ApsIP~kNfs~lTRLDh 160 (332)
T KOG1496|consen 81 VDVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILKKFAPSIPEKNFSALTRLDH 160 (332)
T ss_pred CcEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHhhhCCCCchhcchhhhhhch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcC----ccchhhcccccccHHHHHHHHHhhhHHHHHhcCC
Q 015897 253 NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARING----LPVKEIIKDHKWLEEGFTETIQKRGGLLIKKWGR 328 (398)
Q Consensus 253 ~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G----~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~~G~ 328 (398)
+|+.++||.++||+.++|++++|||||+.+|+|++-+++|++ +|+.+.++|+.|+..+|.+.|++||..+|+.|+.
T Consensus 161 NRA~~QlA~klgv~~~~VkNviIWGNHSsTQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~ark~ 240 (332)
T KOG1496|consen 161 NRALAQLALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIKARKL 240 (332)
T ss_pred hhHHHHHHHhhCCchhhcceeEEecccccccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhhhhhh
Confidence 999999999999999999999999999999999999999987 8999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEee-ccCCCC
Q 015897 329 SSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMV-IMNLSR 397 (398)
Q Consensus 329 t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~-~l~L~~ 397 (398)
++++|+|.+++|+|++|+.|+++++|++++||++| .||+|+|..||+||++.+ |-| +++ .||+++
T Consensus 241 SSA~SaA~aacDhi~dw~~gTpeG~fvSmgV~sDG-sYgip~gli~SfPv~~k~-g~w--kiVqgl~idd 306 (332)
T KOG1496|consen 241 SSAMSAAKAACDHIRDWWFGTPEGTFVSMGVYSDG-SYGIPDGLIFSFPVTIKN-GDW--KIVQGLPIDD 306 (332)
T ss_pred hhhhhHHHhHhhhhhheecCCCCccEEEEeeecCC-CCCCCCCeEEEcceEecC-Cce--EEEcCcchhH
Confidence 99999999999999999999999999999999999 599999999999999996 653 344 377654
No 8
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=4.9e-65 Score=500.14 Aligned_cols=281 Identities=22% Similarity=0.306 Sum_probs=255.9
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc--ceEEEecCcccccCCCcE
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL--REVKIGINPYELFEDAEW 175 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~--~~v~i~~~~~eal~dADi 175 (398)
||+|||| |+||+++|+.|+.++++++ ++| +|+++++++|+++||+|+. ++. .+++++.++|++++|||+
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~e---lvL----~Di~~~~a~g~a~DL~~~~-~~~~~~~~~i~~~~y~~~~~aDi 71 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSE---IVL----IDVNEGVAEGEALDFHHAT-ALTYSTNTKIRAGDYDDCADADI 71 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCE---EEE----EeCCcchhhHHHHHHHhhh-ccCCCCCEEEEECCHHHhCCCCE
Confidence 7999996 9999999999999999874 554 4778899999999999977 443 256777789999999999
Q ss_pred EEEeCCCCCCCCCc--hhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhH
Q 015897 176 ALLIGAKPRGPGME--RAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDE 252 (398)
Q Consensus 176 Viitag~~rk~g~~--r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs 252 (398)
||+|+|.||+|||+ |+|++..|++|++++++.|.++ +|++++|++|||+|+||+++++.+ ++|+ |+||+||.||+
T Consensus 72 vvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~-~p~~i~ivvsNPvDv~t~~~~k~s-g~p~~rviG~gt~LDs 149 (307)
T cd05290 72 IVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV-TKEAVIILITNPLDIAVYIAATEF-DYPANKVIGTGTMLDT 149 (307)
T ss_pred EEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEecCcHHHHHHHHHHHh-CcChhheecccchHHH
Confidence 99999999999999 6999999999999999999999 599999999999999999999998 6887 89999999999
Q ss_pred HHHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhccc---ccccHHHHHHHHHhhhHHHHHhcCCC
Q 015897 253 NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKD---HKWLEEGFTETIQKRGGLLIKKWGRS 329 (398)
Q Consensus 253 ~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~---~~~~~~el~~~v~~~~~~ii~~~G~t 329 (398)
+|++++||+++|+++++|++ |||||||++|||+||+++|+|+|+.++++. +.|..+++.++++++|++|++.||.|
T Consensus 150 ~R~~~~la~~l~v~~~~V~~-~ViGeHGds~vp~wS~~~v~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~KG~t 228 (307)
T cd05290 150 ARLRRIVADKYGVDPKNVTG-YVLGEHGSHAFPVWSLVNIAGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFNRKGWT 228 (307)
T ss_pred HHHHHHHHHHhCCCcccEEE-EEEecCCCceEEeeeeeEECCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHccCee
Confidence 99999999999999999997 899999999999999999999999988752 23446789999999999999999999
Q ss_pred cHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 330 SAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 330 ~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
+|+ .|.++++.+++|+ .|+++++|+|++++| +|| ++|+|||+||++|++|+ +++.+|+|++
T Consensus 229 ~~~-ia~a~~~ii~ail--~d~~~v~~vsv~~~G-~yg-~~~v~~svP~~ig~~Gv--~~i~~l~L~~ 289 (307)
T cd05290 229 NAG-IAKSASRLIKAIL--LDERSILPVCTLLSG-EYG-LSDVALSLPTVIGAKGI--ERVLEIPLDE 289 (307)
T ss_pred hHH-HHHHHHHHHHHHH--hCCCeEEEEEEeeCC-ccC-CCCEEEEEEEEEeCCCc--eEecCCCCCH
Confidence 886 5667777777777 789999999999999 799 58999999999999999 8999999985
No 9
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2.9e-65 Score=505.02 Aligned_cols=294 Identities=51% Similarity=0.758 Sum_probs=267.3
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEEE
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWAL 177 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiVi 177 (398)
||+||||+|+||+++++.|+.++++++++.+.|+|+|++.++++++|+++||.|+.+++...++++.++|++++|||+||
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV 81 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI 81 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence 89999988999999999999999999766677888755433388999999999998666656677788999999999999
Q ss_pred EeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHHHHH
Q 015897 178 LIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDENRAK 256 (398)
Q Consensus 178 itag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~Rl~ 256 (398)
+++|.||+||++|.|++..|++|++++++.|+++|+|++++|++|||+|+||++++++++.+|+ |+||+ |.||++|||
T Consensus 82 itAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~vig~-t~LDs~R~r 160 (323)
T cd00704 82 LVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIALKNAPNLPPKNFTAL-TRLDHNRAK 160 (323)
T ss_pred EeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEe-eHHHHHHHH
Confidence 9999999999999999999999999999999999559999999999999999999999954687 67766 999999999
Q ss_pred HHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhc---ccccccHHHHHHHHHhhhHHHHHhcCCCcHHH
Q 015897 257 CQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEII---KDHKWLEEGFTETIQKRGGLLIKKWGRSSAAS 333 (398)
Q Consensus 257 ~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i---~~~~~~~~el~~~v~~~~~~ii~~~G~t~~~s 333 (398)
++||++++++|++|++++||||||++|+|+||+++|+|+|+.++. .+++|..+++.+++++++++|++.||+++|++
T Consensus 161 ~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~~kg~t~~~~ 240 (323)
T cd00704 161 AQVARKLGVRVSDVKNVIIWGNHSNTQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIKKRGASSAAS 240 (323)
T ss_pred HHHHHHhCcCHHHceeeeEEecccCceeeccccceecCccHHHhcccccChHHHHHHHHHHHHhhHHHHHhccCcchhHH
Confidence 999999999999998778999999999999999999999998774 33356678999999999999999999999977
Q ss_pred HHHHHHHHHHHhhcCCCCC--cEEEEEEEeCCccC-CCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 334 TAVSIVDAMKSLVTPTPEG--DWFSSGVYTNGNPY-GIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 334 ~A~~I~~aI~~~~~~~~~~--~i~~~sv~~~G~~y-gip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
+|.++++.+++|+ +|++ +++|||++++| +| |+|+|+|||+||++|++|| +++.+|+|++
T Consensus 241 ~a~a~~~iv~ail--~~~~~~~v~~~s~~~~g-~y~gi~~~v~~s~P~~ig~~Gv--~~v~~l~L~~ 302 (323)
T cd00704 241 AAKAIADHVKDWL--FGTPPGEIVSMGVYSPG-NPYGIPPGIVFSFPCTCKGGGW--HVVEDLKLND 302 (323)
T ss_pred HHHHHHHHHHHHH--hCCCCCcEEEEEEEeCC-ccCCCCCceEEEEEEEEcCCEE--EEecCCCCCH
Confidence 8999999999999 6777 99999999999 79 9999999999999999999 9999999985
No 10
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.3e-64 Score=500.10 Aligned_cols=297 Identities=58% Similarity=0.909 Sum_probs=271.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
+++||+||||+|+||+++++.|+.+++++.++++.|+|+|+..+.++++|+++||+|+.+++..++++++++|++++|||
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD 80 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDAD 80 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCC
Confidence 46799999977999999999999999998656677888876556677999999999998666656778889999999999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHH
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDEN 253 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~ 253 (398)
+||+|+|.||+||++|.|++..|++|++++++.|++++.|++++|++|||+|+||+++++.++++|+ ++||+ |.||+.
T Consensus 81 ivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~-t~LDs~ 159 (322)
T cd01338 81 WALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAM-TRLDHN 159 (322)
T ss_pred EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEe-hHHHHH
Confidence 9999999999999999999999999999999999999425999999999999999999999966998 78899 999999
Q ss_pred HHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHHHhcCCCcHHH
Q 015897 254 RAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKKWGRSSAAS 333 (398)
Q Consensus 254 Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~~G~t~~~s 333 (398)
||++.+|+++|+++++|++.+||||||++++|+||+++++|+|+.+++.+.+|..+++.+++++++++|++.||+++|+.
T Consensus 160 Rl~~~la~~lgv~~~~v~~~~V~GeHG~s~vp~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~t~~~~ 239 (322)
T cd01338 160 RAKSQLAKKAGVPVTDVKNMVIWGNHSPTQYPDFTNATIGGKPAAEVINDRAWLEDEFIPTVQKRGAAIIKARGASSAAS 239 (322)
T ss_pred HHHHHHHHHhCcChhHeEEEEEEeCCcccEEEehhhcEECCEeHHHhcChHhhHHHHHHHHHHhhHHHHHhCcCCccHHH
Confidence 99999999999999999986779999999999999999999999988776667688999999999999999999999975
Q ss_pred HHHHHHHHHHHhhcCCCC--CcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 334 TAVSIVDAMKSLVTPTPE--GDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 334 ~A~~I~~aI~~~~~~~~~--~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
.+.++++.+++|+ +|+ ++++|+|++++| +||+|+|++||+||++|++|+ +++.+++|++
T Consensus 240 ~a~a~~~iv~ail--~~~~~~~i~~~sv~~~g-~yg~~~~v~~s~P~~ig~~Gv--~~i~~l~L~~ 300 (322)
T cd01338 240 AANAAIDHMRDWV--LGTPEGDWFSMAVPSDG-SYGIPEGLIFSFPVRSKGGGY--EIVEGLEIDD 300 (322)
T ss_pred HHHHHHHHHHHHh--cCCCCCeEEEEEEEccC-ccCCCCCeEEEEEEEEeCCEE--EEEeCCCCCH
Confidence 5568888899888 566 699999999999 899999999999999999999 9999999985
No 11
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=100.00 E-value=7.4e-64 Score=490.50 Aligned_cols=279 Identities=23% Similarity=0.334 Sum_probs=255.8
Q ss_pred EEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEEEEeC
Q 015897 101 VSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIG 180 (398)
Q Consensus 101 IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiViita 180 (398)
|||| |+||+++++.|+..+++++ +.| +|+++++++|+++||+|+.+....+++++.++|++++|||+||+++
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~e---l~L----~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDivVita 72 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADE---IVL----IDINKDKAEGEAMDLQHAASFLPTPKKIRSGDYSDCKDADLVVITA 72 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCE---EEE----EeCCCChhhHHHHHHHHhhcccCCCeEEecCCHHHHCCCCEEEECC
Confidence 6895 9999999999999999874 554 4778899999999999998545456778788999999999999999
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHHHHHHHH
Q 015897 181 AKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDENRAKCQL 259 (398)
Q Consensus 181 g~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~Rl~~~l 259 (398)
|.||+|||+|+|++.+|++|++++++.|+++ +|+|++|++|||+|++|+++++++ ++|+ |+||+||.||++|+++++
T Consensus 73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~vivvsNP~d~~t~~~~~~s-g~p~~~viG~gt~LDs~R~~~~l 150 (299)
T TIGR01771 73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKS-GFDGIFLVATNPVDILTYVAWKLS-GFPKNRVIGSGTVLDTARLRYLL 150 (299)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCHHHHHHHHHHHHh-CCCHHHEEeccchHHHHHHHHHH
Confidence 9999999999999999999999999999998 799999999999999999999998 7987 789999999999999999
Q ss_pred HHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhccc----ccccHHHHHHHHHhhhHHHHHhcCCCcHHHHH
Q 015897 260 ALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKD----HKWLEEGFTETIQKRGGLLIKKWGRSSAASTA 335 (398)
Q Consensus 260 A~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~----~~~~~~el~~~v~~~~~~ii~~~G~t~~~s~A 335 (398)
|+++|+++++|++ +||||||++|||+||+++|+|+|+.+++.+ .++..+++.++++++|++|++.||+++|+ +|
T Consensus 151 a~~l~v~~~~V~~-~v~GeHG~s~vp~~S~~~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~kG~t~~~-~a 228 (299)
T TIGR01771 151 AEKLGVDPQSVHA-YIIGEHGDSEVPVWSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINRKGATYYG-IG 228 (299)
T ss_pred HHHhCcCcCeEEE-EEEecCCCceeeceeeeEECCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhhcCCeeeHH-HH
Confidence 9999999999997 899999999999999999999999988754 13346789999999999999999999886 56
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 336 VSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 336 ~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
.++++.+++|+ +|+++++|||++++| +||+ +|+|||+||++|++|+ +++++++|++
T Consensus 229 ~a~~~~i~ail--~d~~~v~~~s~~~~g-~yg~-~~~~~s~P~~ig~~Gv--~~i~~l~L~~ 284 (299)
T TIGR01771 229 MAVARIVEAIL--HDENRVLPVSAYLDG-EYGI-KDVYIGVPAVLGRNGV--EEIIELPLSD 284 (299)
T ss_pred HHHHHHHHHHH--cCCCcEEEEEEEecc-cCCC-CCEEEEEEEEEeCCee--EEEccCCCCH
Confidence 68888888888 789999999999999 7998 6899999999999999 9999999985
No 12
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=100.00 E-value=9.3e-64 Score=494.45 Aligned_cols=297 Identities=47% Similarity=0.720 Sum_probs=265.1
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEEE
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWAL 177 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiVi 177 (398)
||+||||+|+||+++++.|+.+++++.++++.|+|+|++.+.++++|+++||.|+.+++...+..++++|++++|||+||
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV 80 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI 80 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence 69999988999999999999999986333566777766556667999999999998666555544457799999999999
Q ss_pred EeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCCceEEecCchhHHHHHH
Q 015897 178 LIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPAKNFHALTRLDENRAKC 257 (398)
Q Consensus 178 itag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~kvig~gt~lDs~Rl~~ 257 (398)
+++|.||++|++|.+++..|++|+++++++|+++++|++++|++|||+|+||++++++++++|+++||+||.||++|+|+
T Consensus 81 itAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~~~sg~~~~~vig~gt~LDs~R~r~ 160 (324)
T TIGR01758 81 LVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVLSNYAPSIPPKNFSALTRLDHNRALA 160 (324)
T ss_pred EcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCcceEEEeeehHHHHHHH
Confidence 99999999999999999999999999999999985599999999999999999999999877779999999999999999
Q ss_pred HHHHHcCcCcCceeeEEEEeccCCCccccccceEEc-C---ccchhhcccccccHHHHHHHHHhhhHHHHHhcCCCcHHH
Q 015897 258 QLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIN-G---LPVKEIIKDHKWLEEGFTETIQKRGGLLIKKWGRSSAAS 333 (398)
Q Consensus 258 ~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~-G---~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~~G~t~~~s 333 (398)
+||+++|+++++|++++||||||++|||+||+++|+ | +|+.+++++++|+.+++.+++++++++|++.+|++...+
T Consensus 161 ~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~~~t~~~ 240 (324)
T TIGR01758 161 QVAERAGVPVSDVKNVIIWGNHSSTQYPDVNHATVTKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRARKLSSALS 240 (324)
T ss_pred HHHHHhCCChhhceEeEEEECCCCCcccccccceecCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhccCCCHHHH
Confidence 999999999999987799999999999999999999 9 999998876556678999999999999999776444456
Q ss_pred HHHHHHHHHHHhhcCCCCCcEEEEEEEeCCcc-CCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 334 TAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNP-YGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 334 ~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~-ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
+|..+++.+++|+.+.|+++++|||++++| + ||+|+|++||+||++|++|+ +.+.+++|++
T Consensus 241 ia~~~~~i~~ai~~~~~~~~i~~vs~~~~g-~~yg~~~~v~~s~P~~ig~g~~--~~i~el~L~~ 302 (324)
T TIGR01758 241 AAKAAVDQMHDWVLGTPEGTFVSMGVYSDG-SPYGVPKGLIFSFPVTCKNGEW--KIVEGLCVDD 302 (324)
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEEeecCC-cccCCCCceEEEEEEEEcCCeE--EEecCCCCCH
Confidence 888888999988877789999999999999 8 99999999999999997666 6677799985
No 13
>PLN02602 lactate dehydrogenase
Probab=100.00 E-value=2.7e-63 Score=494.83 Aligned_cols=305 Identities=20% Similarity=0.288 Sum_probs=264.2
Q ss_pred cceeeEEeec-cchhHhhhhccCC-CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhh
Q 015897 74 CYGVFCLTYD-LKAEEETKSWKKM-VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELED 151 (398)
Q Consensus 74 ~~~~~~~~~~-~~~~~~~~~~~~~-~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d 151 (398)
-|++||+... ..... .+|..+. +||+|||| |+||+++++.|+.++++++ +.| +|+++++++|+++||+|
T Consensus 14 ~~~~~~~~~~~~~~~~-~~m~~~~~~KI~IIGa-G~VG~~~a~~l~~~~l~~e---l~L----iDi~~~~~~g~a~DL~~ 84 (350)
T PLN02602 14 GLDLSQAFFKPIHNSS-PPSPTRRHTKVSVVGV-GNVGMAIAQTILTQDLADE---LAL----VDVNPDKLRGEMLDLQH 84 (350)
T ss_pred hhhhhhhhhhcccccc-cccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCE---EEE----EeCCCchhhHHHHHHHh
Confidence 4557777654 22222 2232122 79999995 9999999999999999774 554 47788999999999999
Q ss_pred hcCCCcceEEEec-CcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHH
Q 015897 152 SLFPLLREVKIGI-NPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNAL 230 (398)
Q Consensus 152 ~~~~~~~~v~i~~-~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~ 230 (398)
+. ++...+.++. ++|++++|||+||+++|.||+|||+|.|++.+|++|++++++.|+++ +|++|+|++|||+|++|+
T Consensus 85 ~~-~~~~~~~i~~~~dy~~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~-~p~~ivivvtNPvdv~t~ 162 (350)
T PLN02602 85 AA-AFLPRTKILASTDYAVTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY-SPDTILLIVSNPVDVLTY 162 (350)
T ss_pred hh-hcCCCCEEEeCCCHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCchHHHHH
Confidence 98 5554455553 68999999999999999999999999999999999999999999998 699999999999999999
Q ss_pred HHHHHCCCCCC-ceEEecCchhHHHHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhcccc--cc-
Q 015897 231 ICLKNAPSIPA-KNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDH--KW- 306 (398)
Q Consensus 231 ~~~k~~~~~~~-kvig~gt~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~--~~- 306 (398)
++++++ ++|+ |+||+||.||++|++++||+++|+++++|++ +||||||++|||+||+++|+|+|+.+++.+. .+
T Consensus 163 ~~~k~s-g~p~~rviG~gt~LDs~R~r~~lA~~l~v~~~~V~~-~ViGeHGds~vp~wS~~~i~G~pl~~~~~~~~~~~~ 240 (350)
T PLN02602 163 VAWKLS-GFPANRVIGSGTNLDSSRFRFLIADHLDVNAQDVQA-YIVGEHGDSSVALWSSVSVGGVPVLSFLEKQQIAYE 240 (350)
T ss_pred HHHHHh-CCCHHHEEeecchHHHHHHHHHHHHHhCCCccceee-eEEecCCCceEeeeeeeeECCEEHHHHhhccCCccC
Confidence 999999 5998 7889999999999999999999999999997 8999999999999999999999999876542 11
Q ss_pred --cHHHHHHHHHhhhHHHHHhcCCCcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCC-CceEEEEeEEEcCC
Q 015897 307 --LEEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIA-EDIVFSMPCRSKKV 383 (398)
Q Consensus 307 --~~~el~~~v~~~~~~ii~~~G~t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip-~dv~~svP~~ig~~ 383 (398)
..+++.+++++++++|++.||.|+|+ +|.++++++.+++ +|+++++|+|++++| +||+| +++|||+||++|++
T Consensus 241 ~~~~~~i~~~v~~~g~eIi~~KG~t~~g-ia~a~a~ii~ail--~d~~~v~~vsv~~~g-~Yg~~~~~v~~s~P~~ig~~ 316 (350)
T PLN02602 241 KETLEEIHRAVVDSAYEVIKLKGYTSWA-IGYSVASLVRSLL--RDQRRIHPVSVLAKG-FHGIDEGDVFLSLPAQLGRN 316 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccHHH-HHHHHHHHHHHHH--hcCCCeEEEEEeccc-ccCCCCCCcEEEEEEEEeCC
Confidence 14679999999999999999998875 6667777777777 799999999999999 89994 89999999999999
Q ss_pred CceeeEeeccCCCC
Q 015897 384 TSVCREMVIMNLSR 397 (398)
Q Consensus 384 Gv~~~~i~~l~L~~ 397 (398)
|+ +++++++|++
T Consensus 317 Gi--~~i~~l~L~~ 328 (350)
T PLN02602 317 GV--LGVVNVHLTD 328 (350)
T ss_pred ee--EEEecCCCCH
Confidence 99 9999999985
No 14
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.1e-62 Score=484.75 Aligned_cols=284 Identities=21% Similarity=0.307 Sum_probs=255.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-cCcccccCCCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-INPYELFEDAE 174 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~~~~eal~dAD 174 (398)
.+||+|||| |+||+++++.|+.+++.++ +.| + |+++++++|+++||+|+. ++.....+. +++|++++|||
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~e---l~L--i--D~~~~~~~g~a~Dl~~~~-~~~~~~~v~~~~dy~~~~~ad 73 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADE---LVL--V--DVVEDKLKGEAMDLQHGS-AFLKNPKIEADKDYSVTANSK 73 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCE---EEE--E--eCCccHHHHHHHHHHHhh-ccCCCCEEEECCCHHHhCCCC
Confidence 469999995 9999999999999998764 544 4 677789999999999998 544322333 47899999999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHH
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDEN 253 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~ 253 (398)
+||+++|.+|+|||+|+|++.+|++|++++++.|+++ +|++++|++|||+|++|+++++++ ++|+ |+||+||.||++
T Consensus 74 ivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~vivvsNP~d~~t~~~~k~s-g~p~~~viG~gt~Ld~~ 151 (312)
T cd05293 74 VVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY-SPNAILLVVSNPVDIMTYVAWKLS-GLPKHRVIGSGCNLDSA 151 (312)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEccChHHHHHHHHHHHh-CCCHHHEEecCchHHHH
Confidence 9999999999999999999999999999999999999 699999999999999999999998 7887 789999999999
Q ss_pred HHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhccc-----ccccHHHHHHHHHhhhHHHHHhcCC
Q 015897 254 RAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKD-----HKWLEEGFTETIQKRGGLLIKKWGR 328 (398)
Q Consensus 254 Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~-----~~~~~~el~~~v~~~~~~ii~~~G~ 328 (398)
|++++||+++|+++++|++ +||||||++|||+||+++|+|+|+.+++.. ++...+++.++++++|++|++.||.
T Consensus 152 R~~~~la~~l~v~~~~v~~-~v~GeHG~s~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kg~ 230 (312)
T cd05293 152 RFRYLIAERLGVAPSSVHG-WIIGEHGDSSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIKLKGY 230 (312)
T ss_pred HHHHHHHHHhCCChhhEEE-EEeecCCCCccccceeceECCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999997 899999999999999999999999988632 1112468999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 329 SSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 329 t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
++|+ +|.++++.+++|+ +|++.+++++++++| +||+|+|++||+||++|++|+ +++.+++|++
T Consensus 231 t~~~-~a~a~~~ii~ail--~d~~~~~~vsv~~~g-~yg~~~d~~~svP~~ig~~Gi--~~i~~l~L~~ 293 (312)
T cd05293 231 TSWA-IGLSVADLVDAIL--RNTGRVHSVSTLVKG-LHGIEDEVFLSLPCILGENGI--THVIKQPLTE 293 (312)
T ss_pred chHH-HHHHHHHHHHHHH--cCCCeEEEEEEEeCC-ccCCCCCeEEEEeEEEeCCce--EEEecCCCCH
Confidence 9886 6678888888888 789999999999999 799999999999999999999 8899999985
No 15
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=100.00 E-value=1.2e-62 Score=485.26 Aligned_cols=285 Identities=22% Similarity=0.365 Sum_probs=257.8
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCC
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDA 173 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dA 173 (398)
|+.+||+|||| |+||+++++.|+..+++++ |.| + |+++++++|+++||+|+. ++..++.+++++|++++||
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~e---l~L--~--D~~~~~~~g~~~Dl~~~~-~~~~~~~i~~~~~~~~~~a 74 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADE---LVI--I--DINKEKAEGDAMDLSHAV-PFTSPTKIYAGDYSDCKDA 74 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCE---EEE--E--eCCCchhHHHHHHHHhhc-cccCCeEEEeCCHHHhCCC
Confidence 44679999996 9999999999999998764 544 4 778899999999999998 5555677778899999999
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhH
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDE 252 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs 252 (398)
|+||+++|.||+|||+|.|++..|++|++++++.+.++ +|++|+|++|||+|++|+++++++ ++|+ |+||+||.||+
T Consensus 75 divIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~-~~~~~vivvsNP~d~~~~~~~k~s-g~p~~~viG~gt~LDs 152 (315)
T PRK00066 75 DLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS-GFDGIFLVASNPVDILTYATWKLS-GFPKERVIGSGTSLDS 152 (315)
T ss_pred CEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccCcHHHHHHHHHHHh-CCCHHHEeecCchHHH
Confidence 99999999999999999999999999999999999999 699999999999999999999998 6987 78899999999
Q ss_pred HHHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhccccccc----HHHHHHHHHhhhHHHHHhcCC
Q 015897 253 NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL----EEGFTETIQKRGGLLIKKWGR 328 (398)
Q Consensus 253 ~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~~~----~~el~~~v~~~~~~ii~~~G~ 328 (398)
+|+++++|+++|+++++|++ +||||||++|+|+||+++|+|+|+.+++.+..|. .+++.+++++++++|++.||+
T Consensus 153 ~R~~~~la~~l~v~~~~V~~-~viGeHG~s~v~~~S~~~v~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~kg~ 231 (315)
T PRK00066 153 ARFRYMLSEKLDVDPRSVHA-YIIGEHGDTEFPVWSHANVAGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEIIEKKGA 231 (315)
T ss_pred HHHHHHHHHHhCCCcccEEE-EEEecCCCcceecceeceECCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 99999999999999999997 8999999999999999999999999987654443 347999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 329 SSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 329 t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
++|+ .|.++++.+++++ ++++.++|+|++.+| +|| ++|+|||+||++|++|+ +++.+++|++
T Consensus 232 t~~~-~a~~~~~i~~ail--~~~~~v~~~sv~~~g-~yg-~~~v~~S~Pv~ig~~Gv--~~i~~l~L~~ 293 (315)
T PRK00066 232 TYYG-IAMALARITKAIL--NNENAVLPVSAYLEG-QYG-EEDVYIGVPAVVNRNGI--REIVELPLND 293 (315)
T ss_pred ehHH-HHHHHHHHHHHHH--cCCCeEEEEEEEecc-ccC-CCCEEEEeEEEEeCCcE--EEEcCCCCCH
Confidence 9885 5656666666667 789999999999999 899 58999999999999999 9999999985
No 16
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=3.5e-62 Score=483.77 Aligned_cols=299 Identities=50% Similarity=0.775 Sum_probs=265.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
++.||+|+||+|+||+++++.|+.+++++.++...|+|+|++.+.++++++++|+.|+.+++..++++..+.+++++|||
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aD 80 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVD 80 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCC
Confidence 36799999988999999999999999986222334556665545567899999999987666566666666689999999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCCceEEecCchhHHH
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPAKNFHALTRLDENR 254 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~kvig~gt~lDs~R 254 (398)
+||+++|.++++|++|.+++..|++|++++++.|+++++|++++|++|||+|+||+++++.++++|+++||+||.||++|
T Consensus 81 iVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~~~ig~gt~LDs~R 160 (325)
T cd01336 81 VAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDHNR 160 (325)
T ss_pred EEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCHHHEEeeehHHHHH
Confidence 99999999999999999999999999999999999996589999999999999999999998789887799999999999
Q ss_pred HHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEc----CccchhhcccccccHHHHHHHHHhhhHHHHHh-cCCC
Q 015897 255 AKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIN----GLPVKEIIKDHKWLEEGFTETIQKRGGLLIKK-WGRS 329 (398)
Q Consensus 255 l~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~----G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~-~G~t 329 (398)
++++||+++++++++|++.+||||||++|||+||+++|+ |+|+.++++++.|..+++.+++++++++|++. +|.+
T Consensus 161 ~r~~la~~l~v~~~~v~~~~V~GeHG~s~~~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~~~g~t 240 (325)
T cd01336 161 AKSQIALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVELNGKGKPAREAVKDDAWLNGEFISTVQKRGAAVIKARKLSS 240 (325)
T ss_pred HHHHHHHHhCcChhhceEeEEEEcCCCCeeeccccceeecCCCCccHHHHhcccchhHHHHHHHHHhhHHHHHHccccch
Confidence 999999999999999987679999999999999999999 99999988776677889999999999999996 4455
Q ss_pred cHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 330 SAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 330 ~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
.| ++|.++++.+++|+.+.++++++|+|++++| +||+|+|++||+||++|++|+ +++.+++|++
T Consensus 241 ~~-~~a~~~~~i~~ail~~~~~~~v~~vs~~~~g-~yg~~~~v~~s~P~~ig~~Gv--~~i~~~~L~~ 304 (325)
T cd01336 241 AM-SAAKAICDHVHDWWFGTPEGEFVSMGVYSDG-SYGVPEGLIFSFPVTCKNGKW--KIVQGLSIDD 304 (325)
T ss_pred HH-HHHHHHHHHHHHHHcCCCCCeEEEEEEecCC-CcCCCCceEEEEEEEEeCCEE--EEecCCCCCH
Confidence 55 5888888888888843236999999999999 899999999999999999999 9999999985
No 17
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=100.00 E-value=6e-62 Score=478.77 Aligned_cols=281 Identities=36% Similarity=0.562 Sum_probs=248.1
Q ss_pred HHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEEEEeCCCCCCCCCchhh
Q 015897 113 LFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAG 192 (398)
Q Consensus 113 a~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiViitag~~rk~g~~r~d 192 (398)
.+.|+++++|+ |+++.|||+|+..++++++|+++||.|+.++......++.+.+++++|||+||+|+|.||+||++|.|
T Consensus 2 ~~~~~~g~~~g-~~~~~l~L~D~~~~~~~a~g~a~Dl~d~~~~~~~~~i~~~~~~~~~~daDiVVitaG~~~k~g~tR~d 80 (313)
T TIGR01756 2 SHWIANGDLYG-NRPVCLHLLEIPPALNRLEALAMELEDCAFPNLAGTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRAD 80 (313)
T ss_pred cceeccCcccC-CCeEEEEEecCCCccchhHhHHHHHHHhccccCCceEecCCHHHHhCCCCEEEECCCCCCCcCCCHHH
Confidence 46788899999 89999999977767799999999999998544333334444447999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCCceEEecCchhHHHHHHHHHHHcCcCcCceee
Q 015897 193 LLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSN 272 (398)
Q Consensus 193 ll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~kvig~gt~lDs~Rl~~~lA~~lgv~~~~V~~ 272 (398)
++..|++|++++++.|++++.|++++|++|||+|+||++++++.+++|+++||+||.||++||+++||+++++++++|++
T Consensus 81 ll~~N~~I~~~i~~~i~~~a~~~~ivivvtNPvDv~t~v~~~~~sg~p~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~ 160 (313)
T TIGR01756 81 LLTKNTPIFKATGEALSEYAKPTVKVLVIGNPVNTNCLVAMLHAPKLSAENFSSLCMLDHNRAVSRIASKLKVPVDHIYH 160 (313)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCchHHHHHHHHHHcCCCCHHHEEecccHHHHHHHHHHHHHhCcChhheee
Confidence 99999999999999999995466999999999999999995334489988999999999999999999999999999987
Q ss_pred EEEEeccCCCccccccceEE--cCccchhh--cccccccHHHHHHHHHhhhHHHHHhcCCCcHHHHHHHHHHHHHHhhcC
Q 015897 273 MTIWGNHSTTQVPDFLNARI--NGLPVKEI--IKDHKWLEEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTP 348 (398)
Q Consensus 273 v~V~G~Hg~s~vp~~S~a~I--~G~p~~~~--i~~~~~~~~el~~~v~~~~~~ii~~~G~t~~~s~A~~I~~aI~~~~~~ 348 (398)
.+||||||++|||+||+++| +|+|+..+ +.+ +|..+++.++++++|++|++.||+|+|+.+|.++++.+++|+.+
T Consensus 161 ~~V~GeHG~s~vp~~S~~~V~~~G~~~~~~~~~~~-~~~~~~i~~~v~~~g~~Ii~~kg~t~~~~~a~ai~~iv~ail~~ 239 (313)
T TIGR01756 161 VVVWGNHAESMVADLTHAEFTKNGKHQKVFDELCR-DYPEPDFFEVIAQRAWKILEMRGFTSAASPVKASLQHMKAWLFG 239 (313)
T ss_pred eEEEECCCCceeecccccEEecCCeehhHhhhcCc-HhHHHHHHHHHHHHHHHHHhCcCCcchHHHHHHHHHHHHHHhcC
Confidence 67999999999999999999 99986543 432 46678999999999999999999999987778999999999965
Q ss_pred CCCCcEEEEEEEeCC-ccCCCCCceEEEEeEEEcCCCceeeEeec-cCCCC
Q 015897 349 TPEGDWFSSGVYTNG-NPYGIAEDIVFSMPCRSKKVTSVCREMVI-MNLSR 397 (398)
Q Consensus 349 ~~~~~i~~~sv~~~G-~~ygip~dv~~svP~~ig~~Gv~~~~i~~-l~L~~ 397 (398)
+++++++|+|++++| .+||+|+|++||+||++|++|+ +++++ |+|++
T Consensus 240 ~~~~~i~pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv--~~ive~l~L~~ 288 (313)
T TIGR01756 240 TRPGEVLSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGK--VHVVENFELNP 288 (313)
T ss_pred CCCCeEEEEEEEecCCCccCCCCCEEEEEEEEEeCCce--EEEcCCCCCCH
Confidence 588899999999852 2799988999999999999999 89999 99975
No 18
>PLN00135 malate dehydrogenase
Probab=100.00 E-value=7.5e-62 Score=477.01 Aligned_cols=277 Identities=40% Similarity=0.642 Sum_probs=248.5
Q ss_pred HHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEEEEeCCCCCCCCCchhhhHH
Q 015897 116 LAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLD 195 (398)
Q Consensus 116 L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiViitag~~rk~g~~r~dll~ 195 (398)
|+++++|+.++++.|+|+|++.++++++|+++||.|+.+++...+++++++|++++|||+||+|+|.||+||++|.|++.
T Consensus 2 ~~~g~~~g~~~~~~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~~~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~ 81 (309)
T PLN00135 2 IARGVMLGPDQPVILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKGVNIAVMVGGFPRKEGMERKDVMS 81 (309)
T ss_pred cccccccCCCCeEEEEEecCcccccchhhHHHHHHhhhHHhcCCcEecCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHH
Confidence 56788999888999999876655699999999999998655555655566699999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHHHHHHHHHHHcCcCcCceeeEE
Q 015897 196 INGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDENRAKCQLALKAGVFYDKVSNMT 274 (398)
Q Consensus 196 ~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~Rl~~~lA~~lgv~~~~V~~v~ 274 (398)
.|++|++++++.|+++++|+|++|++|||+|+||+++++.++ +|+ |+||+||.||++||+++||+++|+++++|+.+|
T Consensus 82 ~N~~I~~~i~~~i~~~~~p~aivivvsNPvDv~t~~~~~~sg-~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~ 160 (309)
T PLN00135 82 KNVSIYKSQASALEKHAAPDCKVLVVANPANTNALILKEFAP-SIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVI 160 (309)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEEeCCcHHHHHHHHHHHcC-CCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeE
Confidence 999999999999999647999999999999999999999995 555 899999999999999999999999999996569
Q ss_pred EEeccCCCccccccceEE----cCccchhhcccccccHHHHHHHHHhhhHHHHHh-cCCCcHHHHHHHHHHHHHHhhcCC
Q 015897 275 IWGNHSTTQVPDFLNARI----NGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKK-WGRSSAASTAVSIVDAMKSLVTPT 349 (398)
Q Consensus 275 V~G~Hg~s~vp~~S~a~I----~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~-~G~t~~~s~A~~I~~aI~~~~~~~ 349 (398)
||||||++|||+||+++| +|+|+.+++.+++|+.+++.+++++++++|++. +|+|.| ++|.++++.+++|+.++
T Consensus 161 VlGeHG~s~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~~kg~t~~-~ia~a~~~iv~ai~~~~ 239 (309)
T PLN00135 161 IWGNHSSTQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKARKLSSAL-SAASSACDHIRDWVLGT 239 (309)
T ss_pred EEEcCCCceeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHccCccHHH-HHHHHHHHHHHHHHhCC
Confidence 999999999999999999 999999987665577889999999999999996 666655 48888888888888433
Q ss_pred CCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 350 PEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 350 ~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
|+++++|+|++++| +||+|+|++||+||+++++|+ +.+.+|+|++
T Consensus 240 ~~~~v~~vsv~~~g-~YGi~~~v~~s~P~vlg~~gv--e~v~~l~L~~ 284 (309)
T PLN00135 240 PEGTWVSMGVYSDG-SYGVPPGLIYSFPVTCEKGEW--SIVQGLSIDE 284 (309)
T ss_pred cCCeEEEEEEEecC-ccCCcCCeEEEEEEEEECCEE--EEecCCCCCH
Confidence 78999999999999 899989999999999999999 8888999975
No 19
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=100.00 E-value=6.8e-61 Score=471.45 Aligned_cols=283 Identities=23% Similarity=0.367 Sum_probs=255.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
+||+|||+ |.+|+++++.|+..++..+ |.| +|++++++++.++||+|+.+.....+.+..++++++++||+|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~e---i~l----~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADE---LVL----IDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIV 72 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCE---EEE----EeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEE
Confidence 38999995 9999999999999988653 554 477889999999999998743334455666889999999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHHHH
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDENRA 255 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~Rl 255 (398)
|+++|.||+|||+|.|++.+|++|++++++.|+++ +|++++|++|||+|++|+++++++ ++|+ |+||+||.||++|+
T Consensus 73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~-~~~~~vivvsNP~d~~~~~~~~~~-g~p~~~v~g~gt~LDs~R~ 150 (306)
T cd05291 73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS-GFDGIFLVASNPVDVITYVVQKLS-GLPKNRVIGTGTSLDTARL 150 (306)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEecChHHHHHHHHHHHh-CcCHHHEeeccchHHHHHH
Confidence 99999999999999999999999999999999998 699999999999999999999996 8987 78999999999999
Q ss_pred HHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhccccccc---HHHHHHHHHhhhHHHHHhcCCCcHH
Q 015897 256 KCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL---EEGFTETIQKRGGLLIKKWGRSSAA 332 (398)
Q Consensus 256 ~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~~~---~~el~~~v~~~~~~ii~~~G~t~~~ 332 (398)
+++||+++|+++++|++ +||||||++++|+||+++|+|+|+.+++.+..|. .+++.++++++|++|++.||+++|+
T Consensus 151 ~~~la~~l~v~~~~v~~-~V~G~Hg~s~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~kg~t~~~ 229 (306)
T cd05291 151 RRALAEKLNVDPRSVHA-YVLGEHGDSQFVAWSTVTVGGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIINGKGATYYG 229 (306)
T ss_pred HHHHHHHHCCCcccceE-EEEecCCCceeecceeeEEcCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHHccCccHHH
Confidence 99999999999999997 9999999999999999999999999887654453 5688999999999999999999876
Q ss_pred HHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 333 STAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 333 s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
+|.++++.+++|+ +|++.++|+|++++| +||. +|+|||+||++|++|+ +++++++|++
T Consensus 230 -~a~a~~~~~~ail--~~~~~v~~~s~~~~g-~yg~-~~v~~s~P~~ig~~Gv--~~i~~~~l~~ 287 (306)
T cd05291 230 -IATALARIVKAIL--NDENAILPVSAYLDG-EYGE-KDVYIGVPAIIGRNGV--EEVIELDLTE 287 (306)
T ss_pred -HHHHHHHHHHHHH--cCCCEEEEEEEEecc-ccCC-CCEEEEEEEEEeCCCE--EEEECCCCCH
Confidence 5667778888888 789999999999999 8995 8999999999999999 8999999985
No 20
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00 E-value=3.9e-60 Score=464.84 Aligned_cols=280 Identities=25% Similarity=0.350 Sum_probs=255.8
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-cCcccccCCCcEEE
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-INPYELFEDAEWAL 177 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~~~~eal~dADiVi 177 (398)
|+|||| |.||+++++.|+..+++++ +.| +|+++++++|+++||+|+... +...++. +++|++++|||+||
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~e---l~l----~D~~~~~~~g~~~DL~~~~~~-~~~~~i~~~~~~~~l~~aDiVI 71 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASE---LVL----VDVNEEKAKGDALDLSHASAF-LATGTIVRGGDYADAADADIVV 71 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCE---EEE----EeCCccHHHHHHHhHHHhccc-cCCCeEEECCCHHHhCCCCEEE
Confidence 689995 9999999999999999774 554 377889999999999999854 3333333 46699999999999
Q ss_pred EeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHHHHH
Q 015897 178 LIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDENRAK 256 (398)
Q Consensus 178 itag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~Rl~ 256 (398)
+++|.|++|||+|.|++.+|+++++++++.|+++ +|+||+|++|||+|++|+++++++ ++|+ |+||+||.||++|++
T Consensus 72 itag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~-~p~~~viv~sNP~d~~~~~~~~~s-g~~~~kviG~gt~lDs~r~~ 149 (300)
T cd00300 72 ITAGAPRKPGETRLDLINRNAPILRSVITNLKKY-GPDAIILVVSNPVDILTYVAQKLS-GLPKNRVIGSGTLLDSARFR 149 (300)
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccChHHHHHHHHHHHh-CcCHHHEEecCCcHHHHHHH
Confidence 9999999999999999999999999999999999 599999999999999999999998 6887 899999999999999
Q ss_pred HHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHHHhcCCCcHHHHHH
Q 015897 257 CQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKKWGRSSAASTAV 336 (398)
Q Consensus 257 ~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~~G~t~~~s~A~ 336 (398)
+++|+++|+++++|++ +||||||++|||+||+++|+|+|+.+++++.+|..+++.+++++++++|++.||+++|+ +|.
T Consensus 150 ~~la~~l~v~~~~v~~-~viGeHg~s~v~~~S~~~v~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~~kg~t~~~-~a~ 227 (300)
T cd00300 150 SLLAEKLDVDPQSVHA-YVLGEHGDSQVVAWSTATVGGLPLEELAPFTKLDLEAIEEEVRTSGYEIIRLKGATNYG-IAT 227 (300)
T ss_pred HHHHHHhCCCcccEEE-EEEeccCCceeeeeeeeEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHccCcchHH-HHH
Confidence 9999999999999997 89999999999999999999999999987767778999999999999999999999875 788
Q ss_pred HHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 337 SIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 337 ~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
++++.+++|+ +++++++|+|++++| +||. +|++||+||++|++|+ +++++|+|++
T Consensus 228 a~~~~~~ai~--~~~~~v~~~s~~~~g-~yg~-~~~~~s~Pv~ig~~Gi--~~i~~l~L~~ 282 (300)
T cd00300 228 AIADIVKSIL--LDERRVLPVSAVQEG-QYGI-EDVALSVPAVVGREGV--VRILEIPLTE 282 (300)
T ss_pred HHHHHHHHHH--cCCCeEEEEEEEecC-ccCC-CCEEEEEEEEEeCCCe--EEEecCCCCH
Confidence 8888888888 789999999999999 8995 8999999999999999 8899999985
No 21
>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=6.9e-60 Score=441.32 Aligned_cols=284 Identities=20% Similarity=0.289 Sum_probs=257.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec-CcccccCCCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI-NPYELFEDAE 174 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~-~~~eal~dAD 174 (398)
..||.|+|+ |+||.+.++.|+.+++.+| ++| +|.++++++|.+|||+|.. +++..-+++. .||.+.+|+|
T Consensus 20 ~~KItVVG~-G~VGmAca~siL~k~Lade---l~l----vDv~~dklkGE~MDLqH~s-~f~~~~~V~~~~Dy~~sa~S~ 90 (332)
T KOG1495|consen 20 HNKITVVGV-GQVGMACAISILLKGLADE---LVL----VDVNEDKLKGEMMDLQHGS-AFLSTPNVVASKDYSVSANSK 90 (332)
T ss_pred CceEEEEcc-chHHHHHHHHHHHhhhhhc---eEE----EecCcchhhhhhhhhcccc-ccccCCceEecCcccccCCCc
Confidence 579999995 9999999999999999885 665 4889999999999999988 7776555544 4999999999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHH
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDEN 253 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~ 253 (398)
+||+|+|...++|++|++++++|+.|++.+.+.+-+| +|++++|++|||+|+|||+.||.+ +||+ |+||.||.||++
T Consensus 91 lvIiTAGarq~~gesRL~lvQrNV~ifK~iip~lv~y-Spd~~llvvSNPVDilTYv~wKLS-gfP~nRViGsGcnLDsa 168 (332)
T KOG1495|consen 91 LVIITAGARQSEGESRLDLVQRNVDIFKAIIPALVKY-SPDCILLVVSNPVDILTYVTWKLS-GFPKNRVIGSGCNLDSA 168 (332)
T ss_pred EEEEecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEecCchHHHHHHHHHHc-CCcccceeccCcCccHH
Confidence 9999999988899999999999999999999999999 899999999999999999999998 8998 899999999999
Q ss_pred HHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhccccc-----ccHHHHHHHHHhhhHHHHHhcCC
Q 015897 254 RAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHK-----WLEEGFTETIQKRGGLLIKKWGR 328 (398)
Q Consensus 254 Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~-----~~~~el~~~v~~~~~~ii~~~G~ 328 (398)
|||+.++++||++|+++++ ||+|||||+.||.||.+.|.|.++.++..+.. ..-+|+.+++...+|+|++.||+
T Consensus 169 RFryLi~~~Lg~~pss~hg-wIiGEHGdSsV~vWSgvniAGv~l~~l~~~~~t~~d~e~w~eihK~v~~sayeviklKGy 247 (332)
T KOG1495|consen 169 RFRYLIGNRLGVHPSSCHG-WIIGEHGDSSVPVWSGVNIAGVSLKDLNPDLGTDYDPENWKEIHKQVVDSAYEVIKLKGY 247 (332)
T ss_pred HHHHHHHHHhCCCcccceE-EEeeccCCccceecccccccceEHhHhChhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 9999999999999999997 99999999999999999999999998765421 11247888999999999999999
Q ss_pred CcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 329 SSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 329 t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
|+|+ .+.++++...+++ .|.++++|+|+..+| .|||.+|+|+|+||+++++|+ ..+++.+|++
T Consensus 248 Tswa-Iglsva~l~~ail--~n~~~i~~Vst~~kg-~~gI~~dVflSlPc~l~~~Gi--~~vv~~~Lt~ 310 (332)
T KOG1495|consen 248 TSWA-IGLSVADLAQAIL--RNLRRIHPVSTMVKG-LYGIDDDVFLSLPCLLGANGI--THVVKQKLTD 310 (332)
T ss_pred hHHH-HHHHHHHHHHHHH--hCcCceeeeeecccc-ccCCCCceEEecceeecCCch--hhhhcccCCH
Confidence 9996 6667777777767 799999999999999 899988999999999999999 8899999986
No 22
>PTZ00117 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-57 Score=449.81 Aligned_cols=284 Identities=24% Similarity=0.357 Sum_probs=250.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-cCcccccCCC
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-INPYELFEDA 173 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~~~~eal~dA 173 (398)
+.+||+|||| |+||+++++.++..++ . ++. |+ |+++++++|.++|+.|+.........+. ++++++++||
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~-~---~l~--L~--Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~~l~~A 74 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL-G---DVV--LY--DVIKGVPQGKALDLKHFSTLVGSNINILGTNNYEDIKDS 74 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC-C---eEE--EE--ECCCccchhHHHHHhhhccccCCCeEEEeCCCHHHhCCC
Confidence 4579999996 9999999999999886 3 254 44 6677888999999999863222233443 4688899999
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhH
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDE 252 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs 252 (398)
|+||+++|.+|++|++|.|++..|+++++++++.|+++ +|++|+|++|||+|++++++++++ ++|+ |+||+||.||+
T Consensus 75 DiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~-~p~a~vivvsNP~di~t~~~~~~s-~~p~~rviG~gt~lds 152 (319)
T PTZ00117 75 DVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY-CPNAFVICVTNPLDCMVKVFQEKS-GIPSNKICGMAGVLDS 152 (319)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecChHHHHHHHHHHhh-CCCcccEEEecchHHH
Confidence 99999999999999999999999999999999999999 699999999999999999999987 7886 89999999999
Q ss_pred HHHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhccccccc---HHHHHHHHHhhhHHHHHh--cC
Q 015897 253 NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL---EEGFTETIQKRGGLLIKK--WG 327 (398)
Q Consensus 253 ~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~~~---~~el~~~v~~~~~~ii~~--~G 327 (398)
+|++++||+++|+++++|+. +|+||||++|||+||+++|+|+|+.+++++..|. .+++.+++++++++|++. +|
T Consensus 153 ~R~~~~la~~l~v~~~~v~~-~viGeHg~~~v~~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~~~kg 231 (319)
T PTZ00117 153 SRFRCNLAEKLGVSPGDVSA-VVIGGHGDLMVPLPRYCTVNGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVKLLKKG 231 (319)
T ss_pred HHHHHHHHHHhCCCcccceE-EEeecCCCcEEeceeeceECCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999997 8999999999999999999999999987654443 467889999999999996 66
Q ss_pred CCcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 328 RSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 328 ~t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
.+.| ++|.++++.+++|+ +|+++++|+|++++| +||+ +|++||+||++|++|+ +++++++|++
T Consensus 232 ~t~~-~~a~a~~~~~~ail--~~~~~v~~~s~~~~g-~yg~-~~~~~s~P~~ig~~Gv--~~i~~l~l~~ 294 (319)
T PTZ00117 232 SAFF-APAAAIVAMIEAYL--KDEKRVLVCSVYLNG-QYNC-KNLFVGVPVVIGGKGI--EKVIELELNA 294 (319)
T ss_pred ChHH-HHHHHHHHHHHHHh--cCCCeEEEEEEEecc-ccCC-CCeEEEEEEEEeCCeE--EEEeCCCCCH
Confidence 6654 47888888888888 789999999999999 7999 5999999999999999 9999999985
No 23
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.5e-57 Score=448.16 Aligned_cols=282 Identities=23% Similarity=0.367 Sum_probs=254.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
|||+|||+ |.||+++++.|+..++..+ +.| +|++++++++.++||.|+. ++..+..+.++++++++|||+|
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~e---v~l----~D~~~~~~~g~a~dl~~~~-~~~~~~~i~~~d~~~l~~aDiV 71 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASE---IVL----VDINKAKAEGEAMDLAHGT-PFVKPVRIYAGDYADCKGADVV 71 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCE---EEE----EECCchhhhhHHHHHHccc-cccCCeEEeeCCHHHhCCCCEE
Confidence 58999995 9999999999999988653 554 3778889999999999986 5544456667899999999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHHHH
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDENRA 255 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~Rl 255 (398)
|++++.|+++|++|++++.+|+++++++++.|+++ +|+|+++++|||+|++++++++++ ++|+ |+||+||.||++|+
T Consensus 72 iita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~-~~~giiiv~tNP~d~~~~~~~~~s-g~p~~~viG~gt~LDs~R~ 149 (308)
T cd05292 72 VITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY-APDAILLVVTNPVDVLTYVAYKLS-GLPPNRVIGSGTVLDTARF 149 (308)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHHHHHHHHHH-CcCHHHeecccchhhHHHH
Confidence 99999999999999999999999999999999999 699999999999999999999998 7988 78999999999999
Q ss_pred HHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhcccc-----cccHHHHHHHHHhhhHHHHHhcCCCc
Q 015897 256 KCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDH-----KWLEEGFTETIQKRGGLLIKKWGRSS 330 (398)
Q Consensus 256 ~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~-----~~~~~el~~~v~~~~~~ii~~~G~t~ 330 (398)
+++||+++++++++|++ +||||||++|||+||+++|+|+|+.+++.+. .+..+++.+++++++++|++.||+++
T Consensus 150 ~~~la~~~~v~~~~v~~-~viGeHg~~~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~kg~t~ 228 (308)
T cd05292 150 RYLLGEHLGVDPRSVHA-YIIGEHGDSEVAVWSSANIGGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIERKGATY 228 (308)
T ss_pred HHHHHHHhCCCccceec-eeeccCCCcEEecceeeeECCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHHcCCccH
Confidence 99999999999999997 8999999999999999999999999876542 12356899999999999999999998
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 331 AASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 331 ~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
|+ +|.++++.+++|+ +|+++++|+|++++| +||+ +|++||+||+||++|+ +++++++|++
T Consensus 229 ~~-~a~a~~~i~~ail--~~~~~v~~~s~~~~g-~yg~-~~~~~s~P~~ig~~Gv--~~i~~~~L~~ 288 (308)
T cd05292 229 YA-IGLALARIVEAIL--RDENSVLTVSSLLDG-QYGI-KDVALSLPCIVGRSGV--ERVLPPPLSE 288 (308)
T ss_pred HH-HHHHHHHHHHHHH--cCCCcEEEEEEEEcc-cCCC-CCEEEEEEEEEeCCce--EEecCCCCCH
Confidence 75 5667777777777 789999999999999 7998 8999999999999999 9999999985
No 24
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-56 Score=443.57 Aligned_cols=286 Identities=20% Similarity=0.309 Sum_probs=249.7
Q ss_pred ccCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-cCcccccC
Q 015897 93 WKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-INPYELFE 171 (398)
Q Consensus 93 ~~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~~~~eal~ 171 (398)
|.+++||+|||| |+||+++++.++..++. .+. |+ |++++++++.++|+.|.........++. +++|++++
T Consensus 3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl~----~i~--Lv--Di~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~~~l~ 73 (321)
T PTZ00082 3 MIKRRKISLIGS-GNIGGVMAYLIVLKNLG----DVV--LF--DIVKNIPQGKALDISHSNVIAGSNSKVIGTNNYEDIA 73 (321)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCC----eEE--EE--eCCCchhhHHHHHHHhhhhccCCCeEEEECCCHHHhC
Confidence 345579999995 99999999999998872 244 44 6777888999999999762222233444 47889999
Q ss_pred CCcEEEEeCCCCCCCCC-----chhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEE
Q 015897 172 DAEWALLIGAKPRGPGM-----ERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFH 245 (398)
Q Consensus 172 dADiViitag~~rk~g~-----~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig 245 (398)
|||+||+++|.||+||+ +|.+++..|++++++++++|+++ +|++|+|++|||+|++++++++.+ ++|+ |+||
T Consensus 74 ~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~-~p~a~~iv~sNP~di~t~~~~~~s-g~p~~rviG 151 (321)
T PTZ00082 74 GSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY-CPNAFVIVITNPLDVMVKLLQEHS-GLPKNKVCG 151 (321)
T ss_pred CCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHHHHHHHHhc-CCChhhEEE
Confidence 99999999999999999 99999999999999999999999 699999999999999999999987 7886 8999
Q ss_pred ecCchhHHHHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhcccccc---cHHHHHHHHHhhhHHH
Q 015897 246 ALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKW---LEEGFTETIQKRGGLL 322 (398)
Q Consensus 246 ~gt~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~~---~~~el~~~v~~~~~~i 322 (398)
+||.||++|++++||+++|+++++|++ +|+||||++|||+||+++|+|+|+.+++++..+ ..+++.++++++|++|
T Consensus 152 lgt~lds~R~~~~la~~l~v~~~~v~~-~viGeHg~s~v~~~S~~~i~g~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~i 230 (321)
T PTZ00082 152 MAGVLDSSRLRTYIAEKLGVNPRDVHA-SVIGAHGDKMVPLPRYVTVGGIPLSEFIKKGLITQEEIDEIVERTRNTGKEI 230 (321)
T ss_pred ecCcccHHHHHHHHHHHhCCCccccee-eEEecCCCceEecceeeEECCEEHHHhhhcccCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999997 899999999999999999999999988643211 2467899999999999
Q ss_pred HHh--cCCCcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 323 IKK--WGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 323 i~~--~G~t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
++. +|.+.| ++|.++++.+++|+ +|+++++|||++++| +||+ +|+|+|+||+||++|+ +++++++|++
T Consensus 231 ~~~~gkg~t~~-~ia~a~~~i~~ail--~d~~~v~~vs~~~~g-~yg~-~~v~~s~P~~ig~~Gv--~~i~~~~l~~ 300 (321)
T PTZ00082 231 VDLLGTGSAYF-APAAAAIEMAEAYL--KDKKRVLPCSAYLEG-QYGH-KDIYMGTPAVIGANGV--EKIIELDLTP 300 (321)
T ss_pred HhhcCCCccHH-HHHHHHHHHHHHHH--cCCCcEEEEEEEecc-cCCC-CCeEEEEEEEEeCCeE--EEEeCCCCCH
Confidence 995 567766 47777777777777 799999999999999 7999 8999999999999999 9999999985
No 25
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=100.00 E-value=6.1e-57 Score=443.83 Aligned_cols=286 Identities=24% Similarity=0.384 Sum_probs=251.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-cCcccccCCCcE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-INPYELFEDAEW 175 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~~~~eal~dADi 175 (398)
|||+|+||+|.+|+++++.|+..+++++ |. |+|++.+.+++++.++||+|+........++. +++++++++||+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~---v~--lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~~l~~aDi 75 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKE---IN--LISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLSDVAGSDI 75 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCE---EE--EEECcccccccccccchhhhchhccCCCcEEEECCCHHHhCCCCE
Confidence 6999999889999999999999998653 44 45543344899999999999753222223332 346899999999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHHH
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDENR 254 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~R 254 (398)
||+++|.|+++|++|.+++..|+++++++++.|+++ +|++++|+++||+|++|+++++++ ++|+ |+||+||.||++|
T Consensus 76 Viitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~-~~~~~viv~~npvd~~t~~~~~~~-g~~~~~viG~gt~LDs~R 153 (309)
T cd05294 76 VIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEF-APDTKILVVTNPVDVMTYKALKES-GFDKNRVFGLGTHLDSLR 153 (309)
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCchHHHHHHHHHhc-CCCHHHEeeccchHHHHH
Confidence 999999999999999999999999999999999998 699999999999999999999998 5887 7899999999999
Q ss_pred HHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHHHhcCCCcHHHH
Q 015897 255 AKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKKWGRSSAAST 334 (398)
Q Consensus 255 l~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~~G~t~~~s~ 334 (398)
++++||+++++++++|++ +|+||||++|||+||+++|+|+|+.++++..++..+++.++++++|++|++.||+++|+ +
T Consensus 154 ~~~~la~~l~v~~~~v~~-~viGeHg~s~~~~~S~~~i~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~~kg~t~~~-~ 231 (309)
T cd05294 154 FKVAIAKHFNVHISEVHT-RIIGEHGDSMVPLISSTSIGGIPIKRFPEYKDFDVEKIVETVKNAGQNIISLKGGSEYG-P 231 (309)
T ss_pred HHHHHHHHHCcChHHeEE-EEEecCCCceEeeeeecEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHhcCCchhh-H
Confidence 999999999999999997 89999999999999999999999998865334556789999999999999999998774 6
Q ss_pred HHHHHHHHHHhhcCCCCCcEEEEEEEeCCccC-CCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 335 AVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPY-GIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 335 A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~y-gip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
|..+++.+++|+ +|++.++|++++++| +| |++ |+++|+||+++++|+ +++++|+|++
T Consensus 232 a~~~~~ii~ail--~~~~~v~~vsv~~~g-~~~~~~-~~~~svP~~ig~~Gv--~~i~~l~l~~ 289 (309)
T cd05294 232 ASAISNLVRTIA--NDERRILTVSTYLEG-EIDGIR-DVCIGVPVKLGKNGI--EEIVPIEMDD 289 (309)
T ss_pred HHHHHHHHHHHH--CCCCeEEEEEEEECC-ccCCCC-CeEEEeEEEEcCCcc--EEEeCCCCCH
Confidence 666677777777 799999999999999 56 995 999999999999999 8899999985
No 26
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=100.00 E-value=1.8e-56 Score=439.71 Aligned_cols=280 Identities=24% Similarity=0.393 Sum_probs=245.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-cCcccccCCCcE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-INPYELFEDAEW 175 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~~~~eal~dADi 175 (398)
+||+|||+ |.||+.+|+.++..++. + +.| + |++++..+|.++|+.|.........+++ +++++++++||+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~-~---Vvl--v--Di~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~~~~aDi 72 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA-D---LVL--L--DVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYADTANSDI 72 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC-e---EEE--E--eCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHHhCCCCE
Confidence 59999995 99999999999998874 2 554 4 6677788889999988652211122332 467888999999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHHH
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDENR 254 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~R 254 (398)
||+++|.|+++|++|+|++..|.+++++++++|.++ +|++++|++|||+|++|+++++++ ++|+ |+||+||.||++|
T Consensus 73 VIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~-~p~~~iIv~tNP~di~t~~~~~~s-g~~~~rviG~g~~lds~R 150 (305)
T TIGR01763 73 VVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEH-SPNPIIVVVSNPLDAMTYVAWQKS-GFPKERVIGQAGVLDSAR 150 (305)
T ss_pred EEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHHHHHHHHHH-CcCHHHEEEeccchHHHH
Confidence 999999999999999999999999999999999999 699999999999999999999998 7887 8999999999999
Q ss_pred HHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHHHh--cCCCcHH
Q 015897 255 AKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKK--WGRSSAA 332 (398)
Q Consensus 255 l~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~--~G~t~~~ 332 (398)
+++.||+++++++++|+. +||||||++|||+||+++|+|+|+.+++.++. .+++.++++++|++|++. +|++.|+
T Consensus 151 ~~~~la~~l~v~~~~v~~-~v~GeHg~s~~~~wS~~~i~g~~~~~~~~~~~--~~~l~~~v~~~g~~ii~~~~kg~t~~~ 227 (305)
T TIGR01763 151 FRTFIAMELGVSVQDVTA-CVLGGHGDAMVPLVRYSTVAGIPVADLISAER--IAEIVERTRKGGGEIVNLLKQGSAYYA 227 (305)
T ss_pred HHHHHHHHhCcCHHHeee-eEEecCCCcEEeeeeeeEECCEEHHHhcCHHH--HHHHHHHHHHHHHHHHHhcCCCChHHH
Confidence 999999999999999997 89999999999999999999999998876532 478999999999999996 5677664
Q ss_pred HHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 333 STAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 333 s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
+|.++++.+.+++ .|++.++|+|++++| +||+ +|+++|+||++|++|+ +++++++|++
T Consensus 228 -~a~~~~~i~~ai~--~~~~~v~~~s~~~~~-~yg~-~~v~~s~P~~ig~~Gv--~~i~~~~l~~ 285 (305)
T TIGR01763 228 -PAASVVEMVEAIL--KDRKRVLPCAAYLDG-QYGI-DGIYVGVPVILGKNGV--EHIYELKLDQ 285 (305)
T ss_pred -HHHHHHHHHHHHh--CCCCeEEEEEEEecc-cCCC-CceEEEEEEEEeCCeE--EEEeCCCCCH
Confidence 5566666666666 789999999999999 8999 8999999999999999 9999999985
No 27
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2.2e-56 Score=438.61 Aligned_cols=272 Identities=25% Similarity=0.294 Sum_probs=230.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecC-c--ccccCCC
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGIN-P--YELFEDA 173 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~-~--~eal~dA 173 (398)
+||+||||+|+||+++++.|+.+++.++ +. |+ |++ +++|+++||+|+..+ ..++...+ + |++++||
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~e---lv--Li--Di~--~a~g~alDL~~~~~~--~~i~~~~~~~~~y~~~~da 69 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSE---LA--LY--DIV--NTPGVAADLSHINTP--AKVTGYLGPEELKKALKGA 69 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcE---EE--EE--ecC--ccceeehHhHhCCCc--ceEEEecCCCchHHhcCCC
Confidence 5999999779999999999999998764 54 45 555 899999999998721 23432213 2 8999999
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhH----HHHHHHHCCCCCC-ceEEecC
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTN----ALICLKNAPSIPA-KNFHALT 248 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~----t~~~~k~~~~~~~-kvig~gt 248 (398)
|+||+|+|.||+||++|+|++..|++|++++++.|+++ +|++|+|++|||+|+| +++++|.+ ++|+ |+||+|+
T Consensus 70 DivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~-~p~a~vivvtNPvDv~~~i~t~~~~~~s-~~p~~rviG~~~ 147 (310)
T cd01337 70 DVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA-CPKALILIISNPVNSTVPIAAEVLKKAG-VYDPKRLFGVTT 147 (310)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccCchhhHHHHHHHHHHHhc-CCCHHHEEeeec
Confidence 99999999999999999999999999999999999999 6999999999999998 78888887 7887 8899976
Q ss_pred chhHHHHHHHHHHHcCcCcCceeeEEEEecc-CCCccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHHHhc-
Q 015897 249 RLDENRAKCQLALKAGVFYDKVSNMTIWGNH-STTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKKW- 326 (398)
Q Consensus 249 ~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G~H-g~s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~~- 326 (398)
||++|++++||+++|+++++|+. |||||| |++|||+||++++ +.++ .+ + ..+++.++++++|++|++.|
T Consensus 148 -LDs~R~~~~la~~l~v~~~~V~~-~v~GeHsGds~vp~~S~~~~----~~~~-~~-~-~~~~i~~~v~~~g~~Ii~~k~ 218 (310)
T cd01337 148 -LDVVRANTFVAELLGLDPAKVNV-PVIGGHSGVTILPLLSQCQP----PFTF-DQ-E-EIEALTHRIQFGGDEVVKAKA 218 (310)
T ss_pred -hHHHHHHHHHHHHhCcCHHHEEE-EEEecCCCCceecccccccc----cccC-CH-H-HHHHHHHHHHHHHHHHHhCcc
Confidence 99999999999999999999995 999999 8999999999975 3333 22 1 25789999999999999974
Q ss_pred --CCCcHHHHHHHHHHHHHHhhcC-CCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeecc-CCCC
Q 015897 327 --GRSSAASTAVSIVDAMKSLVTP-TPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIM-NLSR 397 (398)
Q Consensus 327 --G~t~~~s~A~~I~~aI~~~~~~-~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l-~L~~ 397 (398)
|.++| ++|.++++++++|+.. .+++.+++++ +.+| + |. +|+|||+||++|++|+ +++++| +|++
T Consensus 219 gkg~t~~-~~a~a~~~iv~aIl~~~~~~~~~~~~s-~~~~-~-g~-~~v~~s~P~~ig~~Gv--~~i~~l~~L~~ 286 (310)
T cd01337 219 GAGSATL-SMAYAGARFANSLLRGLKGEKGVIECA-YVES-D-VT-EAPFFATPVELGKNGV--EKNLGLGKLND 286 (310)
T ss_pred CCCCcch-hHHHHHHHHHHHHHHhcCCCcceEEEE-EEec-c-CC-CceEEEEEEEEeCCeE--EEEeCCCCCCH
Confidence 66655 4788888888888843 3466788887 7787 4 76 8999999999999999 999999 5975
No 28
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=100.00 E-value=3e-56 Score=438.21 Aligned_cols=271 Identities=24% Similarity=0.246 Sum_probs=228.4
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec-Cc--ccccCCCc
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI-NP--YELFEDAE 174 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~-~~--~eal~dAD 174 (398)
||+||||+|+||+++++.|+.+++.++ ++ |+ |+++ ++|+++||+|.. . ...++.++ ++ |++++|||
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~e---lv--L~--Di~~--a~g~a~DL~~~~-~-~~~i~~~~~~~~~~~~~~daD 69 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSE---LS--LY--DIAG--AAGVAADLSHIP-T-AASVKGFSGEEGLENALKGAD 69 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcE---EE--Ee--cCCC--CcEEEchhhcCC-c-CceEEEecCCCchHHHcCCCC
Confidence 799999779999999999999988663 54 45 5554 789999999976 2 22344322 33 99999999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh----HHHHHHHHCCCCCC-ceEEecCc
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT----NALICLKNAPSIPA-KNFHALTR 249 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~----~t~~~~k~~~~~~~-kvig~gt~ 249 (398)
+||+++|.||+||++|+|++..|++|++++++.|.++ +|++++|++|||+|+ +|+++++.+ ++|+ |+||+|+
T Consensus 70 ivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~-~p~~iiivvsNPvDv~~~i~t~~~~~~s-g~p~~rViG~g~- 146 (312)
T TIGR01772 70 VVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES-CPKAMILVITNPVNSTVPIAAEVLKKKG-VYDPNKLFGVTT- 146 (312)
T ss_pred EEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh-CCCeEEEEecCchhhHHHHHHHHHHHhc-CCChHHEEeeec-
Confidence 9999999999999999999999999999999999999 699999999999998 888888887 7887 7899986
Q ss_pred hhHHHHHHHHHHHcCcCcCceeeEEEEeccCC-CccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHHHh---
Q 015897 250 LDENRAKCQLALKAGVFYDKVSNMTIWGNHST-TQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKK--- 325 (398)
Q Consensus 250 lDs~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~-s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~--- 325 (398)
||++|++++||+++|+++++|+. |||||||+ +|||+||++++ .+. +.++ ..+++.++++++|++|++.
T Consensus 147 LDsaR~r~~la~~l~v~~~~v~~-~ViGeHg~~s~vp~~S~~~~--~~~---~~~~--~~~~i~~~v~~~g~~Ii~~k~g 218 (312)
T TIGR01772 147 LDIVRANTFVAELKGKDPMEVNV-PVIGGHSGETIIPLISQCPG--KVL---FTED--QLEALIHRIQNAGTEVVKAKAG 218 (312)
T ss_pred chHHHHHHHHHHHhCCCHHHeEE-EEEEecCCCccccccccccc--cCC---CCHH--HHHHHHHHHHHHHHHHHhCccC
Confidence 99999999999999999999996 99999987 99999999983 332 2222 2578999999999999996
Q ss_pred cCCCcH--HHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeecc-CCCC
Q 015897 326 WGRSSA--ASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIM-NLSR 397 (398)
Q Consensus 326 ~G~t~~--~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l-~L~~ 397 (398)
+|++.| +.++..++++|..++ .|++.++|++ +++| +||. +|+|||+||++|++|+ ++++++ +|++
T Consensus 219 kg~t~~~ia~a~~~iv~ail~~~--~d~~~v~~~s-~~~g-~yg~-~~v~~s~P~~ig~~Gv--~~i~~~~~L~~ 286 (312)
T TIGR01772 219 AGSATLSMAFAGARFVLSLVRGL--KGEEGVVECA-YVES-DGVT-EATFFATPLLLGKNGV--EKRLGIGKLSS 286 (312)
T ss_pred CCChhHHHHHHHHHHHHHHHHhh--CCCccEEEEE-EEcc-CCCc-CceEEEEEEEEcCCee--EEEEccCCCCH
Confidence 566655 344445556665554 4788999965 8999 7997 8999999999999999 999999 8875
No 29
>PRK06223 malate dehydrogenase; Reviewed
Probab=100.00 E-value=1.4e-54 Score=426.24 Aligned_cols=281 Identities=23% Similarity=0.384 Sum_probs=248.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-cCcccccCCCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-INPYELFEDAE 174 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~~~~eal~dAD 174 (398)
|+||+|||| |.+|+++++.++..++. + +.| + |++++++++.++|+.|.........+++ ++++++++|||
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~-e---v~L--~--D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~~~~~aD 72 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG-D---VVL--F--DIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYEDIAGSD 72 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe-E---EEE--E--ECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHHHHCCCC
Confidence 579999996 99999999999988763 3 444 4 6678889999999998763333334443 46789999999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHH
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDEN 253 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~ 253 (398)
+||+++|.|+++|++|.+++.+|++++++++++|+++ +|++++|++|||+|++|+++++++ ++|+ |+||+||.||++
T Consensus 73 iVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~-~~~~~viv~tNP~d~~~~~~~~~s-~~~~~~viG~gt~lds~ 150 (307)
T PRK06223 73 VVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY-APDAIVIVVTNPVDAMTYVALKES-GFPKNRVIGMAGVLDSA 150 (307)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHHHHHHHHHh-CCCcccEEEeCCCcHHH
Confidence 9999999999999999999999999999999999998 599999999999999999999998 7887 889999999999
Q ss_pred HHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHHHh--cCCCcH
Q 015897 254 RAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKK--WGRSSA 331 (398)
Q Consensus 254 Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~--~G~t~~ 331 (398)
|++++||+++++++++|++ +|+||||++++|+||+++|+|.|+.+++.+ +| .+++.+.+++++++|++. +|++.+
T Consensus 151 r~~~~la~~l~v~~~~v~~-~viGehg~s~~p~~S~~~v~g~~~~~~~~~-~~-~~~l~~~v~~~~~~ii~~~~kg~t~~ 227 (307)
T PRK06223 151 RFRTFIAEELNVSVKDVTA-FVLGGHGDSMVPLVRYSTVGGIPLEDLLSK-EK-LDEIVERTRKGGAEIVGLLKTGSAYY 227 (307)
T ss_pred HHHHHHHHHhCcChhhCcc-cEEcCCCCcceEchhhCEECCEEHHHhCCh-HH-HHHHHHHHHHHHHHHHhhcccCChhH
Confidence 9999999999999999997 899999999999999999999999988543 34 478999999999999985 776655
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 332 ASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 332 ~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
+ .|..+++.+.+++ .|++.++++|++++| +||+ +|++||+||+++++|+ +++.+|+|++
T Consensus 228 ~-~A~~~~~ii~ail--~~~~~~~~~~v~~~g-~yg~-~~~~~s~P~~i~~~Gv--~~i~~~~l~~ 286 (307)
T PRK06223 228 A-PAASIAEMVEAIL--KDKKRVLPCSAYLEG-EYGV-KDVYVGVPVKLGKNGV--EKIIELELDD 286 (307)
T ss_pred H-HHHHHHHHHHHHH--cCCCcEEEEEEEecC-cCCC-CCeEEEeEEEEeCCeE--EEEeCCCCCH
Confidence 3 6777788888888 689999999999999 7999 9999999999999999 8899999975
No 30
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=100.00 E-value=8.3e-54 Score=419.99 Aligned_cols=278 Identities=25% Similarity=0.393 Sum_probs=243.9
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-cCcccccCCCcEEE
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-INPYELFEDAEWAL 177 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~~~~eal~dADiVi 177 (398)
|+|||| |.||+.+++.++..++. + +.| + |++++++++.++|+.|.........++. ++++++++|||+||
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~-e---V~L--~--Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~~~l~dADiVI 71 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG-D---VVL--L--DIVEGLPQGKALDISQAAPILGSDTKVTGTNDYEDIAGSDVVV 71 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc-E---EEE--E--eCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCHHHhCCCCEEE
Confidence 689996 99999999999998874 3 544 4 5667888999999998752222223343 35689999999999
Q ss_pred EeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHHHHH
Q 015897 178 LIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDENRAK 256 (398)
Q Consensus 178 itag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~Rl~ 256 (398)
+++|.|+++|++|.+++.+|++++++++++|+++ +|++++|++|||+|++|+++++++ ++|+ |+||+||.||++|++
T Consensus 72 it~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~-~p~~~iIv~sNP~di~t~~~~~~s-~~~~~rviGlgt~lds~r~~ 149 (300)
T cd01339 72 ITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY-APNAIVIVVTNPLDVMTYVAYKAS-GFPRNRVIGMAGVLDSARFR 149 (300)
T ss_pred EecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHHHHHHHHHh-CCCHHHEEEecchHHHHHHH
Confidence 9999999999999999999999999999999998 699999999999999999999998 7876 899999999999999
Q ss_pred HHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHHHhc--CCCcHHHH
Q 015897 257 CQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKKW--GRSSAAST 334 (398)
Q Consensus 257 ~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~~--G~t~~~s~ 334 (398)
++||+++++++++|++ +|+||||++++|+||+++|+|.|+.+++.+++ .+++.+++++++++|++.+ |++.|+ .
T Consensus 150 ~~la~~l~v~~~~v~~-~v~G~hg~~~~~~~s~~~v~g~~~~~~~~~~~--~~~~~~~v~~~~~~ii~~k~~g~t~~~-~ 225 (300)
T cd01339 150 YFIAEELGVSVKDVQA-MVLGGHGDTMVPLPRYSTVGGIPLTELITKEE--IDEIVERTRNGGAEIVNLLKTGSAYYA-P 225 (300)
T ss_pred HHHHHHhCCCccceEE-EEEeCCCCcceecceecEECCEEHHHhcChHH--HHHHHHHHHHHHHHHHhhcCCCchhHH-H
Confidence 9999999999999997 89999999999999999999999998876543 5789999999999999966 777664 5
Q ss_pred HHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 335 AVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 335 A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
|.++++.+++++ .|++.++|+|++++| +||++ |++||+||++|++|+ +++.+|+|++
T Consensus 226 a~~~~~i~~ail--~~~~~i~~~s~~~~g-~yg~~-~~~~s~P~~ig~~G~--~~~~~l~l~~ 282 (300)
T cd01339 226 AAAIAEMVEAIL--KDKKRVLPCSAYLEG-EYGIK-DIFVGVPVVLGKNGV--EKIIELDLTD 282 (300)
T ss_pred HHHHHHHHHHHH--cCCCcEEEEEEEecc-ccCCC-CeEEEEEEEEeCCeE--EEEeCCCCCH
Confidence 666666666666 789999999999999 89995 999999999999999 8999999985
No 31
>PTZ00325 malate dehydrogenase; Provisional
Probab=100.00 E-value=9e-53 Score=414.81 Aligned_cols=275 Identities=25% Similarity=0.273 Sum_probs=235.8
Q ss_pred ccCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--Cc-ccc
Q 015897 93 WKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--NP-YEL 169 (398)
Q Consensus 93 ~~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~~-~ea 169 (398)
..+|.||+||||+|+||+++++.|+..++.++ +. |+ |+ ++++++++||+|+.. ...+.-.+ ++ |++
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~e---lv--L~--Di--~~~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~ 73 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSE---LS--LY--DI--VGAPGVAADLSHIDT--PAKVTGYADGELWEKA 73 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCE---EE--EE--ec--CCCcccccchhhcCc--CceEEEecCCCchHHH
Confidence 35688999999879999999999998887653 54 45 44 468899999999773 22333222 23 899
Q ss_pred cCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHH----HHCCCCCC-ceE
Q 015897 170 FEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICL----KNAPSIPA-KNF 244 (398)
Q Consensus 170 l~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~----k~~~~~~~-kvi 244 (398)
++|||+||+++|.|++||++|.+++..|++++++++++|+++ +|+++|+++|||+|+++++++ +.+ ++|+ ++|
T Consensus 74 l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv~~~~~~~~~~~~s-g~p~~~vi 151 (321)
T PTZ00325 74 LRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNSTVPIAAETLKKAG-VYDPRKLF 151 (321)
T ss_pred hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHHHHHHHhhhhhcc-CCChhhee
Confidence 999999999999999999999999999999999999999998 799999999999999999995 665 7887 789
Q ss_pred EecCchhHHHHHHHHHHHcCcCcCceeeEEEEeccCC-CccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHH
Q 015897 245 HALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHST-TQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLI 323 (398)
Q Consensus 245 g~gt~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~-s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii 323 (398)
|+++ |||+||+++||+++|+++++|++ |||||||+ +|||+||++ |+|+.+ + ..+++.++++++|++|+
T Consensus 152 G~g~-LDs~R~r~~la~~l~v~~~~V~~-~VlGeHGd~s~v~~~S~~---g~~l~~----~--~~~~i~~~v~~~g~~Ii 220 (321)
T PTZ00325 152 GVTT-LDVVRARKFVAEALGMNPYDVNV-PVVGGHSGVTIVPLLSQT---GLSLPE----E--QVEQITHRVQVGGDEVV 220 (321)
T ss_pred echh-HHHHHHHHHHHHHhCcChhheEE-EEEeecCCcccccchhcc---CCCCCH----H--HHHHHHHHHHHHHHHHH
Confidence 9985 99999999999999999999996 99999999 899999999 788642 1 25789999999999999
Q ss_pred Hhc---CCCcHHHHHHHHHHHHHHhhcC-CCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeec-cCCCC
Q 015897 324 KKW---GRSSAASTAVSIVDAMKSLVTP-TPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVI-MNLSR 397 (398)
Q Consensus 324 ~~~---G~t~~~s~A~~I~~aI~~~~~~-~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~-l~L~~ 397 (398)
+.| |+|.| ++|.++++.+++|+.. +|++.+++++ +++| +||+ +|+|+|+||++|++|+ +++++ ++|++
T Consensus 221 ~~k~~kg~t~~-g~a~a~~~i~~ail~~~~~~~~v~~~~-~~~g-~yg~-~~v~~s~P~~ig~~Gv--~~i~~~~~L~~ 293 (321)
T PTZ00325 221 KAKEGAGSATL-SMAYAAAEWSTSVLKALRGDKGIVECA-FVES-DMRP-ECPFFSSPVELGKEGV--ERVLPIGPLNA 293 (321)
T ss_pred hcccCCCCchH-HHHHHHHHHHHHHHhhcCCCCCeEEEE-EEec-CCCC-CCeEEEEEEEEcCCee--EEEcCCCCCCH
Confidence 976 56665 4777777777777743 4588999995 9999 7997 8999999999999999 99999 89975
No 32
>PLN00106 malate dehydrogenase
Probab=100.00 E-value=3e-51 Score=404.31 Aligned_cols=273 Identities=25% Similarity=0.279 Sum_probs=230.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE---ecCcccccCC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI---GINPYELFED 172 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i---~~~~~eal~d 172 (398)
..||+||||+|+||+++++.|+.++++++ +. |+ |+++ ++|+++||.|+.... .+.- .++.+++++|
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~e---l~--L~--Di~~--~~g~a~Dl~~~~~~~--~i~~~~~~~d~~~~l~~ 86 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSE---LH--LY--DIAN--TPGVAADVSHINTPA--QVRGFLGDDQLGDALKG 86 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCE---EE--EE--ecCC--CCeeEchhhhCCcCc--eEEEEeCCCCHHHHcCC
Confidence 56999999889999999999999999774 54 44 5554 789999999988421 2322 2233899999
Q ss_pred CcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch----hHHHHHHHHCCCCCC-ceEEec
Q 015897 173 AEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN----TNALICLKNAPSIPA-KNFHAL 247 (398)
Q Consensus 173 ADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d----~~t~~~~k~~~~~~~-kvig~g 247 (398)
||+||+++|.||+||++|.|++..|++++++++++++++ +|+++||++|||+| ++++++++.+ ++|+ |+||++
T Consensus 87 aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSNPvD~~~~i~t~~~~~~s-~~p~~~viG~~ 164 (323)
T PLN00106 87 ADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISNPVNSTVPIAAEVLKKAG-VYDPKKLFGVT 164 (323)
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCCccccHHHHHHHHHHcC-CCCcceEEEEe
Confidence 999999999999999999999999999999999999999 69999999999999 8999998887 6877 789998
Q ss_pred CchhHHHHHHHHHHHcCcCcCceeeEEEEeccCC-CccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHHHh-
Q 015897 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHST-TQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKK- 325 (398)
Q Consensus 248 t~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~-s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~- 325 (398)
+ ||++|+++++|+++|+++.+|++ +|+||||+ +|||+||++++ ..+ +.++ ..+++.++++++|++|++.
T Consensus 165 ~-LDs~Rl~~~lA~~lgv~~~~V~~-~ViGeHg~~s~vp~~S~~~~----~~~-~~~~--~~~~i~~~v~~~g~~Ii~~k 235 (323)
T PLN00106 165 T-LDVVRANTFVAEKKGLDPADVDV-PVVGGHAGITILPLLSQATP----KVS-FTDE--EIEALTKRIQNGGTEVVEAK 235 (323)
T ss_pred c-chHHHHHHHHHHHhCCChhheEE-EEEEeCCCccEeeehhccee----ccc-CCHH--HHHHHHHHHHHHHHHHHhCc
Confidence 5 99999999999999999999996 99999965 99999999974 323 2222 2578999999999999996
Q ss_pred --cCCCcHHHHHHHHHHHHHHhhcC-CCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeecc-CCCC
Q 015897 326 --WGRSSAASTAVSIVDAMKSLVTP-TPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIM-NLSR 397 (398)
Q Consensus 326 --~G~t~~~s~A~~I~~aI~~~~~~-~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l-~L~~ 397 (398)
+|.+.| ++|.++++++++|+.+ ++++.++||+ +.+| +| .+++|||+||+||++|+ ++++++ +|++
T Consensus 236 ~~kg~t~~-~~a~a~~~ii~ail~~~~~~~~v~~~s-~~~~-~~--~~~v~~s~P~~ig~~Gv--~~i~~~~~L~~ 304 (323)
T PLN00106 236 AGAGSATL-SMAYAAARFADACLRGLNGEADVVECS-YVQS-EV--TELPFFASKVRLGRNGV--EEVLGLGPLSE 304 (323)
T ss_pred cCCCCchH-HHHHHHHHHHHHHHhccCCCceEEEEE-EECc-cc--CCceEEEEEEEEcCCee--EEEcCCCCCCH
Confidence 466655 4888888888888843 2477999999 7777 45 23499999999999999 999999 9975
No 33
>PRK05086 malate dehydrogenase; Provisional
Probab=100.00 E-value=4e-51 Score=402.88 Aligned_cols=272 Identities=25% Similarity=0.305 Sum_probs=229.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHh-cCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE--ecCcccccCCC
Q 015897 97 VNIAVSGAAGMIANHLLFKLAA-GEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI--GINPYELFEDA 173 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~-~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i--~~~~~eal~dA 173 (398)
|||+||||+|.||+++++.|.. .+... ++. |+ |+++ ..+++++||.|.. ....+.. ..+.+++++|+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~---el~--L~--d~~~-~~~g~alDl~~~~--~~~~i~~~~~~d~~~~l~~~ 70 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGS---ELS--LY--DIAP-VTPGVAVDLSHIP--TAVKIKGFSGEDPTPALEGA 70 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCcc---EEE--EE--ecCC-CCcceehhhhcCC--CCceEEEeCCCCHHHHcCCC
Confidence 6999999889999999999865 34433 244 44 4553 4678899998752 1122322 22338999999
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHH----HHCCCCCC-ceEEecC
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICL----KNAPSIPA-KNFHALT 248 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~----k~~~~~~~-kvig~gt 248 (398)
|+||+++|.++++|++|.+++..|+++++++++.|+++ +|+++|+++|||+|+||++++ |++ ++|+ |+||+|+
T Consensus 71 DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvsNP~D~~t~~~~~~~~~~s-g~p~~rvig~~~ 148 (312)
T PRK05086 71 DVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIITNPVNTTVAIAAEVLKKAG-VYDKNKLFGVTT 148 (312)
T ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccCchHHHHHHHHHHHHHhc-CCCHHHEEeeec
Confidence 99999999999999999999999999999999999999 799999999999999999987 776 7887 8999986
Q ss_pred chhHHHHHHHHHHHcCcCcCceeeEEEEeccCC-CccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHHHhc-
Q 015897 249 RLDENRAKCQLALKAGVFYDKVSNMTIWGNHST-TQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKKW- 326 (398)
Q Consensus 249 ~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~-s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~~- 326 (398)
||++|++++||+++|+++++|+. +||||||+ +|||+||++ +|.|+.+ ++ .+++.++++++|++|++.|
T Consensus 149 -Lds~R~~~~ia~~l~~~~~~v~~-~v~GeHg~~s~~p~~S~~--~g~~l~~----~~--~~~i~~~v~~~g~~ii~~k~ 218 (312)
T PRK05086 149 -LDVIRSETFVAELKGKQPGEVEV-PVIGGHSGVTILPLLSQV--PGVSFTE----QE--VADLTKRIQNAGTEVVEAKA 218 (312)
T ss_pred -HHHHHHHHHHHHHhCCChhheEE-EEEEecCCCceecccccc--CCccCCH----HH--HHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999995 99999976 999999999 8888742 22 5789999999999999987
Q ss_pred --CCCcHHHHHHHHHHHHHHhhcC-CCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeecc-CCCC
Q 015897 327 --GRSSAASTAVSIVDAMKSLVTP-TPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIM-NLSR 397 (398)
Q Consensus 327 --G~t~~~s~A~~I~~aI~~~~~~-~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l-~L~~ 397 (398)
|+|.| ++|.++++.+++|+.+ .|+++++|++ +.+| + |. +|+|||+||++|++|+ ++++++ +|++
T Consensus 219 ~~g~t~~-~~a~a~~~~v~ai~~~~~~~~~v~~~~-~~~~-~-g~-~~v~~s~P~~ig~~Gv--~~i~~~~~L~~ 286 (312)
T PRK05086 219 GGGSATL-SMGQAAARFGLSLVRALQGEQGVVECA-YVEG-D-GK-YARFFAQPVLLGKNGV--EERLPIGTLSA 286 (312)
T ss_pred CCCCchh-hHHHHHHHHHHHHHhcCCCCCcEEEEE-EEec-c-CC-cceEEEEEEEEcCCee--EEEcCCCCCCH
Confidence 66655 4888888888888865 4688899976 8888 4 76 8999999999999999 999999 9875
No 34
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=100.00 E-value=8.4e-50 Score=384.68 Aligned_cols=243 Identities=36% Similarity=0.525 Sum_probs=213.2
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEecCcccccCCCcEEE
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGINPYELFEDAEWAL 177 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~~~~eal~dADiVi 177 (398)
|+||||+|.+|+++++.|+..+... ...|+|+ |++++++++.++||+|..... ..+++.+++.|++++|||+||
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~---~~el~L~--D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv 75 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLL---AIELVLY--DIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVI 75 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCc---ceEEEEE--eCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEE
Confidence 6899977999999999999988311 1234455 567789999999999987544 346666666699999999999
Q ss_pred EeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEEecCchhHHHHH
Q 015897 178 LIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFHALTRLDENRAK 256 (398)
Q Consensus 178 itag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig~gt~lDs~Rl~ 256 (398)
+++|.+|++|++|.+++.+|++++++++++|+++ +|+||+|++|||+|++|++++|++ ++|+ |+||+|| +|++|++
T Consensus 76 ~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~-~p~a~~i~~tNP~d~~t~~~~~~s-g~~~~kviG~~~-ld~~r~~ 152 (263)
T cd00650 76 ITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY-SPDAWIIVVSNPVDIITYLVWRYS-GLPKEKVIGLGT-LDPIRFR 152 (263)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHHHHHHHHHh-CCCchhEEEeec-chHHHHH
Confidence 9999999999999999999999999999999999 699999999999999999999998 7876 8999999 9999999
Q ss_pred HHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHHHhcCCCcHHHHHH
Q 015897 257 CQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKKWGRSSAASTAV 336 (398)
Q Consensus 257 ~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~~G~t~~~s~A~ 336 (398)
+++|+++++++++|+. +|||+||++++|+||+++ ++..+.
T Consensus 153 ~~la~~l~v~~~~v~~-~v~G~hg~~~~~~~s~~~---------------------------------------~a~~~~ 192 (263)
T cd00650 153 RILAEKLGVDPDDVKV-YILGEHGGSQVPDWSTVR---------------------------------------IATSIA 192 (263)
T ss_pred HHHHHHhCCCccceEE-EEEEcCCCceEeccccch---------------------------------------HHHHHH
Confidence 9999999999999995 999999999999999875 233455
Q ss_pred HHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCCCC
Q 015897 337 SIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNLSR 397 (398)
Q Consensus 337 ~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L~~ 397 (398)
.++++| + +|++.++|++++++| +||+|+|++||+||+++++|+ +++++++|++
T Consensus 193 ~ii~ai---~--~~~~~~~~v~v~~~g-~ygi~~~~~~s~P~~i~~~Gi--~~~~~~~l~~ 245 (263)
T cd00650 193 DLIRSL---L--NDEGEILPVGVRNNG-QIGIPDDVVVSVPCIVGKNGV--EEPIEVGLTD 245 (263)
T ss_pred HHHHHH---H--cCCCEEEEEEEEeCC-ccCCcCCEEEEEEEEEeCCce--EEEecCCCCH
Confidence 555555 5 789999999999999 899989999999999999999 8888888874
No 35
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.5e-39 Score=306.14 Aligned_cols=275 Identities=25% Similarity=0.296 Sum_probs=217.1
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec---Cccccc
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI---NPYELF 170 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~---~~~eal 170 (398)
.+..||+|.||+|.||+.|...|.++.+.++ |+|||+- ...|++.||.|..++ ..+.-++ +.++++
T Consensus 26 ~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~-----LaLYDi~----~~~GVaaDlSHI~T~--s~V~g~~g~~~L~~al 94 (345)
T KOG1494|consen 26 QRGLKVAVLGAAGGIGQPLSLLLKLNPLVSE-----LALYDIA----NTPGVAADLSHINTN--SSVVGFTGADGLENAL 94 (345)
T ss_pred cCcceEEEEecCCccCccHHHHHhcCcccce-----eeeeecc----cCCcccccccccCCC--CceeccCChhHHHHHh
Confidence 4568999999999999999999999988763 5567652 567999999998743 2333333 468999
Q ss_pred CCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHH---HHHCCCCCCceEEec
Q 015897 171 EDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALIC---LKNAPSIPAKNFHAL 247 (398)
Q Consensus 171 ~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~---~k~~~~~~~kvig~g 247 (398)
++||+|||.+|.||||||+|.||+..|+.|+++++..+.++ ||+|.+.++|||+|...+++ +|..+-++++.+.+.
T Consensus 95 ~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~-cP~A~i~vIsNPVNstVPIaaevlKk~G~ydpkklfGV 173 (345)
T KOG1494|consen 95 KGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC-CPNALILVISNPVNSTVPIAAEVLKKAGVYDPKKLFGV 173 (345)
T ss_pred cCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh-CccceeEeecCcccccchHHHHHHHHcCCCCccceece
Confidence 99999999999999999999999999999999999999998 79999999999999765543 667778988887788
Q ss_pred CchhHHHHHHHHHHHcCcCc-CceeeEEEEeccC-CCccccccceEEcCccchhhcccccccHHHHHHHHHhhhHHHHHh
Q 015897 248 TRLDENRAKCQLALKAGVFY-DKVSNMTIWGNHS-TTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKK 325 (398)
Q Consensus 248 t~lDs~Rl~~~lA~~lgv~~-~~V~~v~V~G~Hg-~s~vp~~S~a~I~G~p~~~~i~~~~~~~~el~~~v~~~~~~ii~~ 325 (398)
|.||..|++.++++.++++| ++++ ++|+|+|. -+.+|++|++. |...+-.+ ..++++.++|..|.|+.+.
T Consensus 174 TtLDvVRA~tFv~~~~~~~p~~~v~-VPVIGGHaG~TIlPLlSQ~~----p~~~~~~~---~~~~Lt~RiQ~gGtEVV~A 245 (345)
T KOG1494|consen 174 TTLDVVRANTFVAEVLNLDPAEDVD-VPVIGGHAGITIIPLLSQCK----PPFRFTDD---EIEALTHRIQNGGTEVVKA 245 (345)
T ss_pred ehhhhhhHHHHHHHHhCCCchhcCC-cceecCcCCceEeeecccCC----CcccCCHH---HHHHHHHHHHhCCceEEEe
Confidence 99999999999999999999 5577 79999994 69999999997 54433221 2568899999999998874
Q ss_pred c-CCCcH-HHHHHHHHHHHHHhhcC-CCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccC
Q 015897 326 W-GRSSA-ASTAVSIVDAMKSLVTP-TPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMN 394 (398)
Q Consensus 326 ~-G~t~~-~s~A~~I~~aI~~~~~~-~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~ 394 (398)
| |..++ .|+|.+-++...+++.+ .++..+.-|+.+-.- .+|+ .||+.|+++|++|+ +++.+|+
T Consensus 246 KaGaGSATLSMAyAga~fa~s~lrgl~G~~~v~ecafV~s~-~~~~---~fFaspv~Lg~~Gv--~~v~~l~ 311 (345)
T KOG1494|consen 246 KAGAGSATLSMAYAGAKFADSLLRGLNGDEDVVECAFVASP-VTEL---PFFATPVTLGKKGV--EEVLGLG 311 (345)
T ss_pred ccCCCchhhhHHHHHHHHHHHHHHHhCCCCCeEEEeEEecc-ccCc---cceeceEEecCCce--eeecCCC
Confidence 4 44443 34444443333333333 456677777644332 4677 49999999999999 8888753
No 36
>PRK15076 alpha-galactosidase; Provisional
Probab=100.00 E-value=7.5e-33 Score=283.63 Aligned_cols=274 Identities=16% Similarity=0.153 Sum_probs=203.6
Q ss_pred CCEEEEEcCCCchHHHHHH--HHH-hcCcCCCCCceEEEecccccchhhHH-HHHHHHhhhcCCC--cceEEEecCcccc
Q 015897 96 MVNIAVSGAAGMIANHLLF--KLA-AGEVLGPDQPIALKLLGSERSLQALE-GVAMELEDSLFPL--LREVKIGINPYEL 169 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~--~L~-~~~~~~~~~~i~L~L~d~D~~~~~l~-g~a~DL~d~~~~~--~~~v~i~~~~~ea 169 (398)
|+||+|||| |++|++.++ .++ ..++.+. +|. |+ |+++++++ +.+. +++..... ..+++.+++.+++
T Consensus 1 ~~KIaIIGa-Gsvg~~~~~~~~i~~~~~l~~~--evv--Lv--Did~er~~~~~~l-~~~~~~~~~~~~~i~~ttD~~ea 72 (431)
T PRK15076 1 MPKITFIGA-GSTVFTKNLLGDILSVPALRDA--EIA--LM--DIDPERLEESEIV-ARKLAESLGASAKITATTDRREA 72 (431)
T ss_pred CcEEEEECC-CHHHhHHHHHHHHhhCccCCCC--EEE--EE--CCCHHHHHHHHHH-HHHHHHhcCCCeEEEEECCHHHH
Confidence 479999995 999999877 666 3444331 254 45 56677777 4444 55543122 2356666666999
Q ss_pred cCCCcEEEEeCCCC-CCCC--------------Cchhhh--------HHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 170 FEDAEWALLIGAKP-RGPG--------------MERAGL--------LDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 170 l~dADiViitag~~-rk~g--------------~~r~dl--------l~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
++|||+||++++.+ ++++ ++|.+. +.+|++++++++++|+++ ||+||+|++|||+|
T Consensus 73 l~dADfVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~-~p~a~iin~tNP~d 151 (431)
T PRK15076 73 LQGADYVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEV-CPDALLLNYVNPMA 151 (431)
T ss_pred hCCCCEEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHH-CCCeEEEEcCChHH
Confidence 99999999998876 5555 567777 999999999999999999 69999999999999
Q ss_pred hHHHHHHHHCCCCCCceEEec-CchhHHHHHHHHHHHcCcCcCceeeEEEEe-ccCCCccccccceEEcCccchhhccc-
Q 015897 227 TNALICLKNAPSIPAKNFHAL-TRLDENRAKCQLALKAGVFYDKVSNMTIWG-NHSTTQVPDFLNARINGLPVKEIIKD- 303 (398)
Q Consensus 227 ~~t~~~~k~~~~~~~kvig~g-t~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G-~Hg~s~vp~~S~a~I~G~p~~~~i~~- 303 (398)
++|++++++ +. .|+||+| +.+|+. +.+|+.+|+++++|+. ++.| || +.|+.+.+.+|+.+...+.+
T Consensus 152 ivt~~~~~~-~~--~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~-~~~GlNH----~~W~~~~~~~G~D~~p~l~~~ 220 (431)
T PRK15076 152 MNTWAMNRY-PG--IKTVGLCHSVQGTA---EQLARDLGVPPEELRY-RCAGINH----MAWYLELERKGEDLYPELRAA 220 (431)
T ss_pred HHHHHHhcC-CC--CCEEEECCCHHHHH---HHHHHHhCCCHHHeEE-EEEeecc----hhhheeeeECCcchHHHHHHH
Confidence 999999844 22 3899999 999986 7899999999999996 8999 99 78899999888655421111
Q ss_pred ---c-------------------------------ccc----HHHHHHHHH-------hhh-------HHHH-HhcCC--
Q 015897 304 ---H-------------------------------KWL----EEGFTETIQ-------KRG-------GLLI-KKWGR-- 328 (398)
Q Consensus 304 ---~-------------------------------~~~----~~el~~~v~-------~~~-------~~ii-~~~G~-- 328 (398)
. .|. .++..+... ++. .+.. +..+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (431)
T PRK15076 221 AAEGQTRCQDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREELANAER 300 (431)
T ss_pred HhccCchhcccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHhhCCCc
Confidence 0 011 122211111 011 1111 22333
Q ss_pred ---CcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccC
Q 015897 329 ---SSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMN 394 (398)
Q Consensus 329 ---t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~ 394 (398)
..++..|+.|+++|. +|++.++.++|.++|..-++|+|.++++||+++++|++|..+-++|
T Consensus 301 ~~~~~~~e~a~~ii~ai~-----~~~~~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~~g~lP 364 (431)
T PRK15076 301 IEIKRSREYASTIIEAIE-----TGEPSVIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPTKVGDLP 364 (431)
T ss_pred cccccchHHHHHHHHHHh-----cCCceEEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceeeecCCCC
Confidence 235677888888876 7999999999999998889999999999999999999998887776
No 37
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=100.00 E-value=1e-32 Score=281.95 Aligned_cols=275 Identities=17% Similarity=0.141 Sum_probs=199.6
Q ss_pred CEEEEEcCCCchHHH--HHHHHHhcC-cCCCCCceEEEecccccchhhHH---HHHHHHhhhcCCCcceEEEecCccccc
Q 015897 97 VNIAVSGAAGMIANH--LLFKLAAGE-VLGPDQPIALKLLGSERSLQALE---GVAMELEDSLFPLLREVKIGINPYELF 170 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~--la~~L~~~~-~~~~~~~i~L~L~d~D~~~~~l~---g~a~DL~d~~~~~~~~v~i~~~~~eal 170 (398)
+||+|||| |+. ++ +...|+... -+. .-.|.|||+| +++++ ..+..+.+.. ...-++..++|..+|+
T Consensus 1 ~KI~iIGg-GS~-~tp~li~~l~~~~~~l~---~~ei~L~Did--~~Rl~~v~~l~~~~~~~~-g~~~~v~~ttD~~~Al 72 (425)
T cd05197 1 VKIAIIGG-GSS-FTPELVSGLLKTPEELP---ISEVTLYDID--EERLDIILTIAKRYVEEV-GADIKFEKTMDLEDAI 72 (425)
T ss_pred CEEEEECC-chH-hHHHHHHHHHcChhhCC---CCEEEEEcCC--HHHHHHHHHHHHHHHHhh-CCCeEEEEeCCHHHHh
Confidence 59999997 443 22 333444333 111 1244457654 55654 3344444433 2234678889999999
Q ss_pred CCCcEEEEe---CCCC-C--------CCC---Cc-----hhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHH
Q 015897 171 EDAEWALLI---GAKP-R--------GPG---ME-----RAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNAL 230 (398)
Q Consensus 171 ~dADiViit---ag~~-r--------k~g---~~-----r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~ 230 (398)
+|||+||.+ ||.. | +.| ++ .+....+|++++.++++.|+++ ||+||+||+|||+|++|+
T Consensus 73 ~gADfVi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~-~P~a~lin~TNP~di~t~ 151 (425)
T cd05197 73 IDADFVINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKL-SPDAWYLNFTNPAGEVTE 151 (425)
T ss_pred CCCCEEEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHh-CCCcEEEecCChHHHHHH
Confidence 999999986 4432 2 343 22 4566889999999999999999 699999999999999999
Q ss_pred HHHHHCCCCCCceEEecCchhHHHHHHHHHHHcCcCcCceeeEEEEe-ccCCCccccccceEEcCccchhhcc----c--
Q 015897 231 ICLKNAPSIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWG-NHSTTQVPDFLNARINGLPVKEIIK----D-- 303 (398)
Q Consensus 231 ~~~k~~~~~~~kvig~gt~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G-~Hg~s~vp~~S~a~I~G~p~~~~i~----~-- 303 (398)
++++.+|. .|+||+|+. +.|+++.||+.+|+++++|+. +++| ||| ++||+++++|+|+...+. +
T Consensus 152 a~~~~~p~--~rviG~c~~--~~r~~~~ia~~lgv~~~~v~~-~v~GlnHg----~~~s~~~~~G~~l~p~l~~~~~~~~ 222 (425)
T cd05197 152 AVRRYVPP--EKAVGLCNV--PIGVMEIVAKLLGESEEKVDW-QYAGLNHG----IWLNRVRYNGGDVTPKLDEWVEEKS 222 (425)
T ss_pred HHHHhCCC--CcEEEECCC--HHHHHHHHHHHhCCCHHHeEE-EEEeccCe----EeeEeEEECCeecHHHHHHHHhccC
Confidence 99998632 389999999 999999999999999999996 8999 998 999999999988763222 1
Q ss_pred ------c-------ccc------------------------HHH-HH---------HHHHhhh---HHH-----------
Q 015897 304 ------H-------KWL------------------------EEG-FT---------ETIQKRG---GLL----------- 322 (398)
Q Consensus 304 ------~-------~~~------------------------~~e-l~---------~~v~~~~---~~i----------- 322 (398)
. .|. .++ +. +.+.+.. ++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~ 302 (425)
T cd05197 223 KDWKTENPFVDQLSPAAIDFYRFYGVLPNPYLRYYLSWDKXRKLEADKEITWKTRADEVGKVEKELFEVYKFIKENPSVV 302 (425)
T ss_pred ccccccccccccccchHHHHHHhCCCcccCCccccCccchhhhhhHHhhcccCccHHHHHHHHHHHHHHHhhhhhcCChh
Confidence 0 010 000 00 0001100 111
Q ss_pred -HHhcCCCcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccC
Q 015897 323 -IKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMN 394 (398)
Q Consensus 323 -i~~~G~t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~ 394 (398)
+..++...++..|+.|+++|. +|++.++.++|.++|..-++|+|.++++||+++++|++|..+.++|
T Consensus 303 ~~~~r~~~~~~e~a~~ii~ai~-----~~~~~~~~vNv~N~G~I~nLp~d~vVEvp~~v~~~Gi~P~~vg~lp 370 (425)
T cd05197 303 ELIKRGGRKYSEAAIPLIRALL-----NDNGARFVVNTRNNGAIANIDDDVVVEVPCLVDKNGPHPIKVGPLD 370 (425)
T ss_pred hhhhcCCcccHHHHHHHHHHHH-----cCCCeEEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceecccCCCC
Confidence 112344556788888888886 8999999999999998899999999999999999999888877776
No 38
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=100.00 E-value=1.8e-31 Score=272.30 Aligned_cols=276 Identities=18% Similarity=0.169 Sum_probs=201.0
Q ss_pred CEEEEEcCCCchHHH-HHHHHHhc-CcCCCCCceEEEecccccchhhHHHH---HHHHhhhcCCCcceEEEecCcccccC
Q 015897 97 VNIAVSGAAGMIANH-LLFKLAAG-EVLGPDQPIALKLLGSERSLQALEGV---AMELEDSLFPLLREVKIGINPYELFE 171 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~-la~~L~~~-~~~~~~~~i~L~L~d~D~~~~~l~g~---a~DL~d~~~~~~~~v~i~~~~~eal~ 171 (398)
+||+|||| |++-.. +...|+.. .-+. . -.|.|+|+|. +++++.. +.++.+.. .....+..++|..++++
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~-~--~ei~L~Did~-~~rl~~v~~~~~~~~~~~-~~~~~v~~t~d~~~al~ 74 (419)
T cd05296 1 MKLTIIGG-GSSYTPELIEGLIRRYEELP-V--TELVLVDIDE-EEKLEIVGALAKRMVKKA-GLPIKVHLTTDRREALE 74 (419)
T ss_pred CEEEEECC-chHhHHHHHHHHHhccccCC-C--CEEEEecCCh-HHHHHHHHHHHHHHHHhh-CCCeEEEEeCCHHHHhC
Confidence 69999997 554221 33444442 2122 1 2444577663 6777543 33333322 22236777889999999
Q ss_pred CCcEEEEeCCCCCCCCCchhh--------------------hHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHH
Q 015897 172 DAEWALLIGAKPRGPGMERAG--------------------LLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALI 231 (398)
Q Consensus 172 dADiViitag~~rk~g~~r~d--------------------ll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~ 231 (398)
|||+||++.+.++.+++++.+ ...+|++++.+++++|+++ ||+||+|++|||+|++|++
T Consensus 75 gadfVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~-~Pda~lin~TNP~~ivt~a 153 (419)
T cd05296 75 GADFVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEEL-APDAWLINFTNPAGIVTEA 153 (419)
T ss_pred CCCEEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHH-CCCeEEEEecCHHHHHHHH
Confidence 999999987766555554433 4789999999999999999 6999999999999999999
Q ss_pred HHHHCCCCCCceEEecCchhHHHHHHHHHHHcCcCcCceeeEEEEe-ccCCCccccccceEEcCccchh-hcc-------
Q 015897 232 CLKNAPSIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWG-NHSTTQVPDFLNARINGLPVKE-IIK------- 302 (398)
Q Consensus 232 ~~k~~~~~~~kvig~gt~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G-~Hg~s~vp~~S~a~I~G~p~~~-~i~------- 302 (398)
+++.+ +.|+||+|+. +.|+++.+|+.+|+++++|+. +++| || +.|+.+.+.+|+.+.. ++.
T Consensus 154 ~~k~~---~~rviGlc~~--~~r~~~~ia~~lg~~~~~v~~-~v~GlNH----~~w~~~~~~~G~D~~p~l~~~~~~~~~ 223 (419)
T cd05296 154 VLRHT---GDRVIGLCNV--PIGLQRRIAELLGVDPEDVFI-DYAGLNH----LGWLRRVLLDGEDVLPELLEDLAALLS 223 (419)
T ss_pred HHHhc---cCCEEeeCCc--HHHHHHHHHHHhCCCHHHceE-EEEeccc----ceeeeeeeECCcccHHHHHHHhhhccc
Confidence 99886 4499999987 699999999999999999996 9999 99 7888889888876553 211
Q ss_pred ---ccccc--------------------HHHHHHHHH----hhh-------HHH---------------HHhcCCCcHHH
Q 015897 303 ---DHKWL--------------------EEGFTETIQ----KRG-------GLL---------------IKKWGRSSAAS 333 (398)
Q Consensus 303 ---~~~~~--------------------~~el~~~v~----~~~-------~~i---------------i~~~G~t~~~s 333 (398)
+..|. .++..++.. .++ .++ +..++++.|+.
T Consensus 224 ~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~~r~g~~y~e 303 (419)
T cd05296 224 FEEGLLFGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELEKRGGAGYSE 303 (419)
T ss_pred cccccchHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhHhhcCcchHH
Confidence 00010 111111100 011 111 12445555778
Q ss_pred HHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccC
Q 015897 334 TAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMN 394 (398)
Q Consensus 334 ~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~ 394 (398)
.|..|+++|. +|++.++.++|.++|..-++|+|.++++||.++++|++|..+-++|
T Consensus 304 ~a~~ii~ai~-----~~~~~~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~vg~lP 359 (419)
T cd05296 304 AALALISAIY-----NDKGDIHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPLPVGPLP 359 (419)
T ss_pred HHHHHHHHHh-----cCCCcEEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccCCCCC
Confidence 8889988886 7999999999999998889999999999999999999888877776
No 39
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=100.00 E-value=2.7e-32 Score=239.66 Aligned_cols=140 Identities=31% Similarity=0.482 Sum_probs=127.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
+||+||||+|+||+++++.|+.+++.+| |.| + |+++++++|.++||+|+.+....++.++.++|++++|||+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~e---i~L--~--D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADE---IVL--I--DINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSE---EEE--E--ESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCc---eEE--e--ccCcccceeeehhhhhhhhhcccccccccccccccccccEE
Confidence 6999999879999999999999999774 554 4 77888999999999999865556778888999999999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC-ceEE
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA-KNFH 245 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~-kvig 245 (398)
|+++|.||+||++|.+++..|+++++++++.|+++ +|++++|++|||+|++|+++++++ ++|+ |+||
T Consensus 74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~-~p~~~vivvtNPvd~~t~~~~~~s-~~~~~kviG 141 (141)
T PF00056_consen 74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY-APDAIVIVVTNPVDVMTYVAQKYS-GFPPNKVIG 141 (141)
T ss_dssp EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH-STTSEEEE-SSSHHHHHHHHHHHH-TSSGGGEEE
T ss_pred EEeccccccccccHHHHHHHhHhHHHHHHHHHHHh-CCccEEEEeCCcHHHHHHHHHHhh-CcCcccCcC
Confidence 99999999999999999999999999999999999 599999999999999999999998 6776 7786
No 40
>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....
Probab=99.97 E-value=3.3e-31 Score=240.47 Aligned_cols=144 Identities=31% Similarity=0.443 Sum_probs=128.1
Q ss_pred CchhHHHHHHHHHHHcCcCcCceeeEEEEeccCCCccccccceEEcCccchhhccc----ccccHHHHHHHHHhhhHHHH
Q 015897 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKD----HKWLEEGFTETIQKRGGLLI 323 (398)
Q Consensus 248 t~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G~Hg~s~vp~~S~a~I~G~p~~~~i~~----~~~~~~el~~~v~~~~~~ii 323 (398)
|.||++|++++||+++|++|++|+. |||||||++|||+||+++|+|.|+.++.+. .++..+++.++++++|++|+
T Consensus 1 T~LDs~R~~~~la~~l~v~~~~v~~-~ViGeHg~s~~~~~S~~~v~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii 79 (174)
T PF02866_consen 1 TMLDSARFRYFLAEKLGVNPSSVNA-YVIGEHGDSQVPDWSHAKVGGVPLLSYAKPSGKLSEEELEELTERVRKAGYEII 79 (174)
T ss_dssp THHHHHHHHHHHHHHHTSGGGGEEE-EEEBSSSTTEEEEGGGEEETTEEHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHCcCccceEE-EEEecCCcceeeeeecccccccccccccccccchhHHhhhccccccEeccceee
Confidence 6899999999999999999999995 999999999999999999999999766543 24566899999999999999
Q ss_pred HhcCCCcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCc-eEEEEeEEEcCCCceeeEeec-cCCCC
Q 015897 324 KKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAED-IVFSMPCRSKKVTSVCREMVI-MNLSR 397 (398)
Q Consensus 324 ~~~G~t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~d-v~~svP~~ig~~Gv~~~~i~~-l~L~~ 397 (398)
+.||++++.++|.++++.+++|+ .|++.++|+|++++| +||++++ +|||+||++|++|+ +++++ ++|++
T Consensus 80 ~~k~g~t~~s~A~a~~~~v~ail--~~~~~i~~~sv~~~g-~yg~~~~~v~~s~P~~ig~~Gv--~~i~~~~~L~~ 150 (174)
T PF02866_consen 80 KAKGGSTSYSIAAAAARIVEAIL--KDERRILPVSVYLDG-EYGIPDGCVYFSVPVVIGKNGV--EKIVEDLPLSE 150 (174)
T ss_dssp HHHSSSCHHHHHHHHHHHHHHHH--TTHTEEEEEEEEEES-GGGEESSSEEEEEEEEEETTEE--EEEECSBSSTH
T ss_pred eeccccCcCCHHHHHHHHHHHHh--hcccccccceecccc-ccCcccccceecceEEEcCCee--EEEeCCCCCCH
Confidence 99944444458889999999989 788999999999999 7999665 99999999999999 88999 99875
No 41
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=99.97 E-value=1.6e-29 Score=259.06 Aligned_cols=275 Identities=16% Similarity=0.102 Sum_probs=207.6
Q ss_pred CEEEEEcCCCchHHHHHH--HHHhc-CcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC--cceEEEecCcccccC
Q 015897 97 VNIAVSGAAGMIANHLLF--KLAAG-EVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL--LREVKIGINPYELFE 171 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~--~L~~~-~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~--~~~v~i~~~~~eal~ 171 (398)
+||+|||| |++|++++. .++.. .+.+. +|.| + |+++++++....++.+..... ..+++.+++.+++++
T Consensus 1 ~KIaIIGa-Gs~G~a~a~~~~i~~~~~~~g~--eV~L--~--Did~e~l~~~~~~~~~~~~~~~~~~~I~~ttD~~eal~ 73 (423)
T cd05297 1 IKIAFIGA-GSVVFTKNLVGDLLKTPELSGS--TIAL--M--DIDEERLETVEILAKKIVEELGAPLKIEATTDRREALD 73 (423)
T ss_pred CeEEEECC-ChHHhHHHHHHHHhcCCCCCCC--EEEE--E--CCCHHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHHhc
Confidence 58999995 999999877 56544 44331 3554 4 677888998888887654222 235666777789999
Q ss_pred CCcEEEEeCCCCCCCCCch----------------------hhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHH
Q 015897 172 DAEWALLIGAKPRGPGMER----------------------AGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNA 229 (398)
Q Consensus 172 dADiViitag~~rk~g~~r----------------------~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t 229 (398)
|||+||++.+..+.++.++ .....+|++++.++++.+.++ +|++|+|++|||++++|
T Consensus 74 ~AD~Vi~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~-~p~a~~i~~tNPv~i~t 152 (423)
T cd05297 74 GADFVINTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEEL-CPDAWLLNYANPMAELT 152 (423)
T ss_pred CCCEEEEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHH-CCCCEEEEcCChHHHHH
Confidence 9999999887655444433 556789999999999999999 69999999999999999
Q ss_pred HHHHHHCCCCCCceEEecCchhHHHHHHHHHHHcCcCcCceeeEEEEe-ccCCCccccccceEEcCccchhhccc---c-
Q 015897 230 LICLKNAPSIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWG-NHSTTQVPDFLNARINGLPVKEIIKD---H- 304 (398)
Q Consensus 230 ~~~~k~~~~~~~kvig~gt~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G-~Hg~s~vp~~S~a~I~G~p~~~~i~~---~- 304 (398)
+++++.++ .|+||+|+. +.|+++.+|+.+|+++++|+. +++| || +.||...+.+|+.+...+.+ +
T Consensus 153 ~~~~k~~~---~rviG~c~~--~~~~~~~~a~~l~~~~~~v~~-~~~GlNH----~~w~~~~~~~G~d~~p~l~~~~~~~ 222 (423)
T cd05297 153 WALNRYTP---IKTVGLCHG--VQGTAEQLAKLLGEPPEEVDY-QVAGINH----MAWLLKFEYNGEDLYPLLDEWIEEG 222 (423)
T ss_pred HHHHHhCC---CCEEEECCc--HHHHHHHHHHHhCCCHHHeEE-EEEeecc----HhhhhhheECCcchHHHHHHHHhcc
Confidence 99999984 489999988 899999999999999999996 8999 99 78888888888765432211 0
Q ss_pred --c------cc---------------------------HHHHHHHH--------------HhhhHH-H----------HH
Q 015897 305 --K------WL---------------------------EEGFTETI--------------QKRGGL-L----------IK 324 (398)
Q Consensus 305 --~------~~---------------------------~~el~~~v--------------~~~~~~-i----------i~ 324 (398)
. |. .++..... .+.-+. . ..
T Consensus 223 ~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (423)
T cd05297 223 SEEWDQLSPVRFDMYRRYGLFPTESSEHLSEYVPHYRKETKKIWYGEFNEDEYGGRDEEQGWEWYEERLKLILAEIDKEE 302 (423)
T ss_pred CccchhcccchHHHHHHcCCcccCcchhhhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHhhhhhccchhcchh
Confidence 0 00 00110000 000000 0 01
Q ss_pred hcCCCcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccC
Q 015897 325 KWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMN 394 (398)
Q Consensus 325 ~~G~t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~ 394 (398)
..+...++..|+.|+++|. +|++.++.++|.++|..-|+|+|.++++||.++++|++|..+-++|
T Consensus 303 ~~~~~~~~e~a~~ii~ai~-----~~~~~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~p~~~g~lp 367 (423)
T cd05297 303 LDPVKRSGEYASPIIEALV-----TGKPRRINGNVPNNGLIPNLPDDVVVEVPALVDRNGIHPEKIGPLP 367 (423)
T ss_pred ccccccchHHHHHHHHHHh-----cCCceEEEEECCCCCCCCCCCCCcEEEEeeEEcCCCceecccCCCC
Confidence 1222335677888888886 7999999999999998899999999999999999999998887776
No 42
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=99.97 E-value=8.7e-29 Score=253.50 Aligned_cols=273 Identities=15% Similarity=0.110 Sum_probs=189.3
Q ss_pred CEEEEEcCCCchHHH--HHHHHHhcC-cCCCCCceEEEecccccchhhHH---HHHHHHhhhcCCCcceEEEecCccccc
Q 015897 97 VNIAVSGAAGMIANH--LLFKLAAGE-VLGPDQPIALKLLGSERSLQALE---GVAMELEDSLFPLLREVKIGINPYELF 170 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~--la~~L~~~~-~~~~~~~i~L~L~d~D~~~~~l~---g~a~DL~d~~~~~~~~v~i~~~~~eal 170 (398)
|||+|||| |++ ++ +...|+... .++ . -.|.|+|+ ++++++ ..+..+.+.. +..-++..++|..+|+
T Consensus 1 ~KI~iIGa-GS~-~tp~li~~l~~~~~~l~-~--~ei~L~DI--d~~rl~~v~~l~~~~~~~~-g~~~~v~~Ttdr~eAl 72 (437)
T cd05298 1 FKIVIAGG-GST-YTPGIVKSLLDRKEDFP-L--RELVLYDI--DAERQEKVAEAVKILFKEN-YPEIKFVYTTDPEEAF 72 (437)
T ss_pred CeEEEECC-cHH-HHHHHHHHHHhCcccCC-C--CEEEEECC--CHHHHHHHHHHHHHHHHhh-CCCeEEEEECCHHHHh
Confidence 69999997 443 22 344444442 122 1 23445655 556665 3344443332 2234677889999999
Q ss_pred CCCcEEEEe---CCCC-C--------CCCC---c-----hhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHH
Q 015897 171 EDAEWALLI---GAKP-R--------GPGM---E-----RAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNAL 230 (398)
Q Consensus 171 ~dADiViit---ag~~-r--------k~g~---~-----r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~ 230 (398)
+|||+||.+ ||.. | |.|. + ......||++++.++++.|+++ ||+||+|++|||+|++|+
T Consensus 73 ~gADfVi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~-~pda~lin~tNP~~~vt~ 151 (437)
T cd05298 73 TDADFVFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKY-SPDAWILNYSNPAAIVAE 151 (437)
T ss_pred CCCCEEEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHH-CCCeEEEEecCcHHHHHH
Confidence 999999986 4432 2 3332 2 3456899999999999999999 699999999999999999
Q ss_pred HHHHHCCCCCCceEEecCchhHHHHHHHHHHHcCcCcCceeeEEEEe-ccCCCccccccceEEc-Cccchhhcc----cc
Q 015897 231 ICLKNAPSIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWG-NHSTTQVPDFLNARIN-GLPVKEIIK----DH 304 (398)
Q Consensus 231 ~~~k~~~~~~~kvig~gt~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G-~Hg~s~vp~~S~a~I~-G~p~~~~i~----~~ 304 (398)
++++..|. .|+||.|.. ..-++..+|+.+|+++++|+. .+.| || +.|+.+.+.+ |+.+...+. +.
T Consensus 152 ~~~~~~~~--~kviGlC~~--~~~~~~~la~~lg~~~~~v~~-~~~GlNH----~~w~~~~~~~~G~D~~p~l~e~~~~~ 222 (437)
T cd05298 152 ALRRLFPN--ARILNICDM--PIAIMDSMAAILGLDRKDLEP-DYFGLNH----FGWFTKIYDKQGEDLLPKLREHVKEN 222 (437)
T ss_pred HHHHHCCC--CCEEEECCc--HHHHHHHHHHHhCCCHHHceE-EEEeecc----hhhhhheEECCCCchHHHHHHHHhcc
Confidence 99988533 389999977 677899999999999999995 7799 99 6888899998 876542221 10
Q ss_pred c--------------cc---------------------------HHHHHHH-----------HHhhhHHH---H------
Q 015897 305 K--------------WL---------------------------EEGFTET-----------IQKRGGLL---I------ 323 (398)
Q Consensus 305 ~--------------~~---------------------------~~el~~~-----------v~~~~~~i---i------ 323 (398)
. |. .++..++ +++...++ .
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~~~ 302 (437)
T cd05298 223 GYLPPDSDEEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKIIET 302 (437)
T ss_pred CCCcccccccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhhhhc
Confidence 1 11 1111111 11111111 1
Q ss_pred ------HhcCCCcHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccC-CCCCceEEEEeEEEcCCCceeeEeeccC
Q 015897 324 ------KKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPY-GIAEDIVFSMPCRSKKVTSVCREMVIMN 394 (398)
Q Consensus 324 ------~~~G~t~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~y-gip~dv~~svP~~ig~~Gv~~~~i~~l~ 394 (398)
+.++. .|+..+..|+++|. +|++.++++|++++| .| ++|+|+++|+||+++++|+.+..+-+||
T Consensus 303 ~~~~~~~~~~~-~ya~~a~~ii~aI~-----~d~~~~~~vnv~n~G-~i~nL~~d~~vevP~~v~~~Gi~pi~vg~lP 373 (437)
T cd05298 303 GTAEGSTFHVD-VHGEYIVDLAASIA-----YNTKERFLVIVENNG-AIPNLPDDAMVEVPAYIGSNGPEPLVVGKIP 373 (437)
T ss_pred CChhhhhhhcc-chHHHHHHHHHHHH-----cCCCeEEEEEeecCC-ccCCCCCCcEEEEEEEEeCCCceecccCCCC
Confidence 11111 24556666766665 799999999999999 56 4789999999999999999887777776
No 43
>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.95 E-value=3.6e-27 Score=237.73 Aligned_cols=278 Identities=19% Similarity=0.210 Sum_probs=194.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCC-Cc-eEEEecccccchhhHH---HHHHHHhhhcCCCcceEEEecCcccc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPD-QP-IALKLLGSERSLQALE---GVAMELEDSLFPLLREVKIGINPYEL 169 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~-~~-i~L~L~d~D~~~~~l~---g~a~DL~d~~~~~~~~v~i~~~~~ea 169 (398)
++.||+|||| |+++.. .++.+.+...+ -+ ..|.|+|+ ++++++ ..+..+.+.. ....++..++|..+|
T Consensus 2 ~~~KI~iIGg-GSt~tp---~~v~g~l~~~e~l~~~el~L~Di--d~~r~~~i~~~~~~~v~~~-g~~~kv~~ttd~~eA 74 (442)
T COG1486 2 KKFKIVIIGG-GSTYTP---KLLLGDLARTEELPVRELALYDI--DEERLKIIAILAKKLVEEA-GAPVKVEATTDRREA 74 (442)
T ss_pred CcceEEEECC-CccccH---HHHHHHHhcCccCCcceEEEEeC--CHHHHHHHHHHHHHHHHhh-CCCeEEEEecCHHHH
Confidence 4579999997 555444 33333332221 12 25666755 556665 2233333322 223467788999999
Q ss_pred cCCCcEEEEe---CCCC---------CCCCC---c-----hhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHH
Q 015897 170 FEDAEWALLI---GAKP---------RGPGM---E-----RAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNA 229 (398)
Q Consensus 170 l~dADiViit---ag~~---------rk~g~---~-----r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t 229 (398)
|+|||+|+.+ ||.. .|.|. + ......|++|++.++++.|+++ ||+||+||+|||+.++|
T Consensus 75 l~gAdfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~-~P~Aw~lNytNP~~~vT 153 (442)
T COG1486 75 LEGADFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKV-CPNAWMLNYTNPAAIVT 153 (442)
T ss_pred hcCCCEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHh-CCCceEEeccChHHHHH
Confidence 9999999986 3322 23332 2 3345689999999999999999 69999999999999999
Q ss_pred HHHHHHCCCCCCceEEecCchhHHHHHHHHHHHcCcCc-CceeeEEEEe-ccCCCccccccceEEcCccchh-hcc---c
Q 015897 230 LICLKNAPSIPAKNFHALTRLDENRAKCQLALKAGVFY-DKVSNMTIWG-NHSTTQVPDFLNARINGLPVKE-IIK---D 303 (398)
Q Consensus 230 ~~~~k~~~~~~~kvig~gt~lDs~Rl~~~lA~~lgv~~-~~V~~v~V~G-~Hg~s~vp~~S~a~I~G~p~~~-~i~---~ 303 (398)
+++.|++|.+ |+||.|.. ..-....||+.||+.+ ++++. -+.| || +.||..++.+|.++.. ++. +
T Consensus 154 eAv~r~~~~~--K~VGlCh~--~~g~~~~lAe~L~~~~~~~l~~-~~aGlNH----~~w~~~~~~~G~d~~p~l~~~~~~ 224 (442)
T COG1486 154 EAVRRLYPKI--KIVGLCHG--PIGIAMELAEVLGLEPREDLRY-RVAGLNH----MVWILRVRDDGEDLYPELLEALEE 224 (442)
T ss_pred HHHHHhCCCC--cEEeeCCc--hHHHHHHHHHHhCCCchhceeE-EEeechh----hhhhhHhhhcCccchHHHHHHHhc
Confidence 9999987523 89999887 6788999999999975 99995 7899 99 6788888888865432 111 0
Q ss_pred --------------cccc---------------------H--------HHH------HHHHHhhhHHH------------
Q 015897 304 --------------HKWL---------------------E--------EGF------TETIQKRGGLL------------ 322 (398)
Q Consensus 304 --------------~~~~---------------------~--------~el------~~~v~~~~~~i------------ 322 (398)
..|. . +++ .+.++++.-+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~re~~~~~~~~~~~~~~~ 304 (442)
T COG1486 225 GGSPSEPENKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKREKELFELYKKPELKEK 304 (442)
T ss_pred cccCCccccccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHHHHHHHHHHhhhhhhcC
Confidence 0010 0 001 01222221111
Q ss_pred ---HHhcCCC--cHHHHHHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccC
Q 015897 323 ---IKKWGRS--SAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMN 394 (398)
Q Consensus 323 ---i~~~G~t--~~~s~A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~ 394 (398)
.++++.+ .++..|..|+++|. +|++.++.++|.++|.+-++|+|.++++||+++++|++|.-+..||
T Consensus 305 p~~~~~~~~~~~~~~e~a~~ii~Ai~-----~~~~~~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~~g~lP 376 (442)
T COG1486 305 PEELEKRIGAGKYSSEYASNIINAIE-----NNKPSRIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLAVGDLP 376 (442)
T ss_pred chhhhhcCCcccccHHHHHHHHHHHh-----cCCceEEEEEcCCCccccCCCCCeEEEeeEEecCCCCcccccCCCC
Confidence 1234443 55778899998886 8999999999999999999999999999999999999775555555
No 44
>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.
Probab=99.79 E-value=2.5e-18 Score=156.67 Aligned_cols=156 Identities=19% Similarity=0.145 Sum_probs=111.6
Q ss_pred EEEEEcCCCchHHHH-HH-HHHhcCcCCCCCceEEEecccccchhhHH---HHHHHHhhhcCCCcceEEEecCcccccCC
Q 015897 98 NIAVSGAAGMIANHL-LF-KLAAGEVLGPDQPIALKLLGSERSLQALE---GVAMELEDSLFPLLREVKIGINPYELFED 172 (398)
Q Consensus 98 KI~IiGA~G~vG~~l-a~-~L~~~~~~~~~~~i~L~L~d~D~~~~~l~---g~a~DL~d~~~~~~~~v~i~~~~~eal~d 172 (398)
||+|||| |++-... +. .+...+-++ .-.|.|+| +|+++|+ ..+..+.+.. ....+++.++|..+|++|
T Consensus 1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~---~~ei~L~D--id~~RL~~~~~~~~~~~~~~-~~~~~v~~ttd~~eAl~g 73 (183)
T PF02056_consen 1 KITIIGA-GSTYFPLLLLGDLLRTEELS---GSEIVLMD--IDEERLEIVERLARRMVEEA-GADLKVEATTDRREALEG 73 (183)
T ss_dssp EEEEETT-TSCCHHHHHHHHHHCTTTST---EEEEEEE---SCHHHHHHHHHHHHHHHHHC-TTSSEEEEESSHHHHHTT
T ss_pred CEEEECC-chHhhHHHHHHHHhcCccCC---CcEEEEEc--CCHHHHHHHHHHHHHHHHhc-CCCeEEEEeCCHHHHhCC
Confidence 8999996 7766663 23 333333333 13555665 5567776 4455544433 333467788999999999
Q ss_pred CcEEEEeCC------------CCCCCCCc----------hhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHH
Q 015897 173 AEWALLIGA------------KPRGPGME----------RAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNAL 230 (398)
Q Consensus 173 ADiViitag------------~~rk~g~~----------r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~ 230 (398)
||+||.+.. .|.+.|.. ......|+++++.++++.|+++ ||+||+||+|||+.++|+
T Consensus 74 ADfVi~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~-~PdAw~iNytNP~~~vt~ 152 (183)
T PF02056_consen 74 ADFVINQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEEL-CPDAWLINYTNPMGIVTE 152 (183)
T ss_dssp ESEEEE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHH-TTTSEEEE-SSSHHHHHH
T ss_pred CCEEEEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEeccChHHHHHH
Confidence 999999642 34455432 3466899999999999999999 699999999999999999
Q ss_pred HHHHHCCCCCCceEEecCchhHHHHHHHHHHHcCc
Q 015897 231 ICLKNAPSIPAKNFHALTRLDENRAKCQLALKAGV 265 (398)
Q Consensus 231 ~~~k~~~~~~~kvig~gt~lDs~Rl~~~lA~~lgv 265 (398)
++.|+++.. |++|.|.. ..-+...+|+.||.
T Consensus 153 a~~r~~~~~--k~vGlCh~--~~~~~~~la~~L~~ 183 (183)
T PF02056_consen 153 ALSRYTPKI--KVVGLCHG--PQGTRRQLAKLLGM 183 (183)
T ss_dssp HHHHHSTTS--EEEEE-SH--HHHHHHHHHHHHT-
T ss_pred HHHHhCCCC--CEEEECCC--HHHHHHHHHHHhCc
Confidence 999998655 89999987 67788999998873
No 45
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=98.54 E-value=2.6e-07 Score=84.44 Aligned_cols=104 Identities=19% Similarity=0.203 Sum_probs=67.9
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhh----h---c-C------CCcceEEEe
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELED----S---L-F------PLLREVKIG 163 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d----~---~-~------~~~~~v~i~ 163 (398)
||+|+|| |.+|..++..++..|. ++.| + |.+++.++.....+.+ . . . ....+++++
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~-----~V~l--~--d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 70 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGY-----EVTL--Y--DRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFT 70 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTS-----EEEE--E---SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEE
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCC-----cEEE--E--ECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccc
Confidence 7999995 9999999999999986 4655 4 5565555433222222 1 0 0 012356665
Q ss_pred cCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhH
Q 015897 164 INPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTN 228 (398)
Q Consensus 164 ~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~ 228 (398)
+ +++++.|||+||-+. .++.++-+++.+.+.+++.|++++ +||...+-
T Consensus 71 ~-dl~~~~~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~il--asnTSsl~ 118 (180)
T PF02737_consen 71 T-DLEEAVDADLVIEAI--------------PEDLELKQELFAELDEICPPDTIL--ASNTSSLS 118 (180)
T ss_dssp S-SGGGGCTESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTSEE--EE--SSS-
T ss_pred c-CHHHHhhhheehhhc--------------cccHHHHHHHHHHHHHHhCCCceE--EecCCCCC
Confidence 5 556666999999984 246789999999999997788887 88876553
No 46
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.52 E-value=5.6e-07 Score=88.10 Aligned_cols=109 Identities=16% Similarity=0.145 Sum_probs=73.3
Q ss_pred ccCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhc----C-C---------Ccc
Q 015897 93 WKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSL----F-P---------LLR 158 (398)
Q Consensus 93 ~~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~----~-~---------~~~ 158 (398)
+.++.||+|||| |.+|..+|..++..|. ++.+ + |++++.++.....+.... . . ...
T Consensus 2 ~~~~~~V~ViGa-G~mG~~iA~~~a~~G~-----~V~l--~--d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~ 71 (286)
T PRK07819 2 SDAIQRVGVVGA-GQMGAGIAEVCARAGV-----DVLV--F--ETTEELATAGRNRIEKSLERAVSRGKLTERERDAALA 71 (286)
T ss_pred CCCccEEEEEcc-cHHHHHHHHHHHhCCC-----EEEE--E--ECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHh
Confidence 445679999995 9999999999999886 3554 4 566666553222211110 0 0 112
Q ss_pred eEEEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhc-CCCeEEEEECCCchhH
Q 015897 159 EVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVA-SRNVKVIVVGNPCNTN 228 (398)
Q Consensus 159 ~v~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a-~p~a~vIvvtNP~d~~ 228 (398)
+++.+ ++++++++||+||.+. .++.++-+++...+++++ .|++++ +||....-
T Consensus 72 ~l~~~-~~~~~~~~~d~ViEav--------------~E~~~~K~~l~~~l~~~~~~~~~il--~snTS~~~ 125 (286)
T PRK07819 72 RLRFT-TDLGDFADRQLVIEAV--------------VEDEAVKTEIFAELDKVVTDPDAVL--ASNTSSIP 125 (286)
T ss_pred CeEee-CCHHHhCCCCEEEEec--------------ccCHHHHHHHHHHHHHhhCCCCcEE--EECCCCCC
Confidence 44454 4568899999999984 346778888888999985 567766 77776643
No 47
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.41 E-value=1.5e-06 Score=86.45 Aligned_cols=112 Identities=10% Similarity=0.068 Sum_probs=74.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhh----hc----C--CCcceEEEecC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELED----SL----F--PLLREVKIGIN 165 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d----~~----~--~~~~~v~i~~~ 165 (398)
..||+|||| |.+|+.++..++..|+ +|.+ + |++++.++.....+.. .. . ....+++..++
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~-----~V~l--~--D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~ 76 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGL-----DVVA--W--DPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVAT 76 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCC-----eEEE--E--eCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCC
Confidence 468999995 9999999999999886 3554 4 5555544322211111 10 0 01124555566
Q ss_pred cccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHH
Q 015897 166 PYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICL 233 (398)
Q Consensus 166 ~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~ 233 (398)
..+++++||+|+.+. .+|.++-+++...+.+++.|++ |+.||...+...-+.
T Consensus 77 l~~av~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a--IlaSnTS~l~~s~la 128 (321)
T PRK07066 77 IEACVADADFIQESA--------------PEREALKLELHERISRAAKPDA--IIASSTSGLLPTDFY 128 (321)
T ss_pred HHHHhcCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe--EEEECCCccCHHHHH
Confidence 668899999999984 3356788888888999876777 559998876444343
No 48
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=98.37 E-value=2e-06 Score=84.72 Aligned_cols=143 Identities=17% Similarity=0.145 Sum_probs=94.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhh----c-----CC-----CcceEE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDS----L-----FP-----LLREVK 161 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~----~-----~~-----~~~~v~ 161 (398)
.+||+|||| |.+|..+|..++..|+ +|.| + |++++.++.-...++.. . .. .+..++
T Consensus 3 i~kv~ViGa-G~MG~gIA~~~A~~G~-----~V~l--~--D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~ 72 (307)
T COG1250 3 IKKVAVIGA-GVMGAGIAAVFALAGY-----DVVL--K--DISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARIT 72 (307)
T ss_pred ccEEEEEcc-cchhHHHHHHHhhcCC-----ceEE--E--eCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhcc
Confidence 469999995 9999999999999665 3655 3 66655543221111111 0 00 011232
Q ss_pred EecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh-HHHHHHHHCCCCC
Q 015897 162 IGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT-NALICLKNAPSIP 240 (398)
Q Consensus 162 i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~-~t~~~~k~~~~~~ 240 (398)
. +.++.+++|||+||-.. .+|..+-+++.+++.++++|++++ +||...+ ++.+. ..+ ..|
T Consensus 73 ~-~~~~~~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~aIl--ASNTSsl~it~ia-~~~-~rp 133 (307)
T COG1250 73 P-TTDLAALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDAIL--ASNTSSLSITELA-EAL-KRP 133 (307)
T ss_pred c-cCchhHhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCcEE--eeccCCCCHHHHH-HHh-CCc
Confidence 2 34677999999999884 567899999999999998889988 9999876 44443 222 222
Q ss_pred CceEE------------------ecCchhHHHHHHHHHHHcCcCc
Q 015897 241 AKNFH------------------ALTRLDENRAKCQLALKAGVFY 267 (398)
Q Consensus 241 ~kvig------------------~gt~lDs~Rl~~~lA~~lgv~~ 267 (398)
.|++| -.|.-++...-..+++++|..|
T Consensus 134 er~iG~HFfNP~~~m~LVEvI~g~~T~~e~~~~~~~~~~~igK~~ 178 (307)
T COG1250 134 ERFIGLHFFNPVPLMPLVEVIRGEKTSDETVERVVEFAKKIGKTP 178 (307)
T ss_pred hhEEEEeccCCCCcceeEEEecCCCCCHHHHHHHHHHHHHcCCCC
Confidence 23333 3455677777777888888543
No 49
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.29 E-value=5.5e-06 Score=80.93 Aligned_cols=106 Identities=19% Similarity=0.255 Sum_probs=67.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhc------CCC---------cceE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSL------FPL---------LREV 160 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~------~~~---------~~~v 160 (398)
++||+|||+ |.+|..+|..++..|. +|.+ + |++++.++.....+++.. ... ...+
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~-----~V~l--~--d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGF-----DVTI--Y--DISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRI 72 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCC-----eEEE--E--eCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCe
Confidence 569999995 9999999999998875 3544 4 555555443222111100 000 1245
Q ss_pred EEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh
Q 015897 161 KIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT 227 (398)
Q Consensus 161 ~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~ 227 (398)
+.+++..+++++||+||.+.. .+.++.+++.+.+.+++.+++++ ++|....
T Consensus 73 ~~~~d~~~a~~~aDlVieavp--------------e~~~~k~~~~~~l~~~~~~~~ii--~sntSt~ 123 (287)
T PRK08293 73 TLTTDLAEAVKDADLVIEAVP--------------EDPEIKGDFYEELAKVAPEKTIF--ATNSSTL 123 (287)
T ss_pred EEeCCHHHHhcCCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCCEE--EECcccC
Confidence 566665678999999999853 23567777777788875556654 5666554
No 50
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=98.25 E-value=2.2e-05 Score=73.71 Aligned_cols=104 Identities=21% Similarity=0.117 Sum_probs=68.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcC--CCcceEEEecCcccccCCCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLF--PLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~--~~~~~v~i~~~~~eal~dAD 174 (398)
|||+|||++|++|++++..|+..+. +|.+ + ++++++++..+.++.+... ++...+.. ++..++++++|
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~-----~V~v--~--~r~~~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~aD 70 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN-----KIII--G--SRDLEKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKRAD 70 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-----EEEE--E--EcCHHHHHHHHHHHHhhccccCCCceEEE-eChHHHHhcCC
Confidence 5899998569999999999998773 3544 2 6777777766665443220 11111222 35678899999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT 227 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~ 227 (398)
+||++.. .+.+.++.+.+.... .+.+||-++||.+.
T Consensus 71 vVilavp----------------~~~~~~~l~~l~~~l-~~~vvI~~~ngi~~ 106 (219)
T TIGR01915 71 VVILAVP----------------WDHVLKTLESLRDEL-SGKLVISPVVPLAS 106 (219)
T ss_pred EEEEECC----------------HHHHHHHHHHHHHhc-cCCEEEEeccCcee
Confidence 9999864 233444445555432 35678999999753
No 51
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.23 E-value=6.9e-06 Score=79.93 Aligned_cols=123 Identities=15% Similarity=0.123 Sum_probs=74.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHH-------HHHhhhc-C------CCcceEE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVA-------MELEDSL-F------PLLREVK 161 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a-------~DL~d~~-~------~~~~~v~ 161 (398)
+.||+|||+ |.+|..++..++..|. ++.+ + |+++++++... .++.+.. . .....++
T Consensus 3 ~~kI~VIG~-G~mG~~ia~~la~~g~-----~V~~--~--d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~ 72 (282)
T PRK05808 3 IQKIGVIGA-GTMGNGIAQVCAVAGY-----DVVM--V--DISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARIT 72 (282)
T ss_pred ccEEEEEcc-CHHHHHHHHHHHHCCC-----ceEE--E--eCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE
Confidence 568999995 9999999999998875 3554 3 66666653110 1111110 0 0112444
Q ss_pred EecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCC
Q 015897 162 IGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPA 241 (398)
Q Consensus 162 i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~ 241 (398)
.+ .+++++++||+||++.. .+..+..++.+.+.+++++++++ +||-..+-...+.+.. ..+.
T Consensus 73 ~~-~~~~~~~~aDlVi~av~--------------e~~~~k~~~~~~l~~~~~~~~il--~s~ts~~~~~~la~~~-~~~~ 134 (282)
T PRK05808 73 GT-TDLDDLKDADLVIEAAT--------------ENMDLKKKIFAQLDEIAKPEAIL--ATNTSSLSITELAAAT-KRPD 134 (282)
T ss_pred Ee-CCHHHhccCCeeeeccc--------------ccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHHHhh-CCCc
Confidence 44 45678999999999852 23556677777788876667766 6766665443443433 2333
Q ss_pred ceEEe
Q 015897 242 KNFHA 246 (398)
Q Consensus 242 kvig~ 246 (398)
|.+++
T Consensus 135 r~ig~ 139 (282)
T PRK05808 135 KVIGM 139 (282)
T ss_pred ceEEe
Confidence 44443
No 52
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.17 E-value=1.1e-05 Score=88.62 Aligned_cols=110 Identities=17% Similarity=0.210 Sum_probs=77.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhh----c----C------CCcceEE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDS----L----F------PLLREVK 161 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~----~----~------~~~~~v~ 161 (398)
..||+|||| |.+|..+|..++..|+ +|.| + |++++.++.-...+... . . .....++
T Consensus 313 i~~v~ViGa-G~mG~gIA~~~a~~G~-----~V~l--~--d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~ 382 (715)
T PRK11730 313 VKQAAVLGA-GIMGGGIAYQSASKGV-----PVIM--K--DINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIR 382 (715)
T ss_pred cceEEEECC-chhHHHHHHHHHhCCC-----eEEE--E--eCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeE
Confidence 468999995 9999999999999986 4655 4 66666654221111111 0 0 0113455
Q ss_pred EecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh-HHHHH
Q 015897 162 IGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT-NALIC 232 (398)
Q Consensus 162 i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~-~t~~~ 232 (398)
.+ .++++++|||+||-+. .++.++-+++..+++++++|++++ +||...+ ++.+.
T Consensus 383 ~~-~~~~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~il--asNTSsl~i~~la 437 (715)
T PRK11730 383 PT-LDYAGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVREDTIL--ASNTSTISISLLA 437 (715)
T ss_pred Ee-CCHHHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCCcEE--EEcCCCCCHHHHH
Confidence 54 4678999999999984 456889999999999997788776 9998776 44544
No 53
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.17 E-value=1.6e-05 Score=78.42 Aligned_cols=108 Identities=15% Similarity=0.185 Sum_probs=65.2
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhc---CC------CcceEEEec
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSL---FP------LLREVKIGI 164 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~---~~------~~~~v~i~~ 164 (398)
.+++||+|||+ |.+|..++..|+..|. +|.+ + |++++.++.....+.+.. .+ ....++.++
T Consensus 2 ~~~~~I~vIGa-G~mG~~iA~~l~~~g~-----~V~~--~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 71 (311)
T PRK06130 2 NPIQNLAIIGA-GTMGSGIAALFARKGL-----QVVL--I--DVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEA 71 (311)
T ss_pred CCccEEEEECC-CHHHHHHHHHHHhCCC-----eEEE--E--ECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeC
Confidence 44679999995 9999999999998774 3544 3 666666654433222111 00 112344555
Q ss_pred CcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh
Q 015897 165 NPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT 227 (398)
Q Consensus 165 ~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~ 227 (398)
+..+++++||+||++... ...+..++...+..+..++++| +||...+
T Consensus 72 ~~~~~~~~aDlVi~av~~--------------~~~~~~~v~~~l~~~~~~~~ii--~s~tsg~ 118 (311)
T PRK06130 72 GLAAAVSGADLVIEAVPE--------------KLELKRDVFARLDGLCDPDTIF--ATNTSGL 118 (311)
T ss_pred CHHHHhccCCEEEEeccC--------------cHHHHHHHHHHHHHhCCCCcEE--EECCCCC
Confidence 555679999999998532 1334555555666664455554 4555444
No 54
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=98.16 E-value=9.9e-06 Score=89.06 Aligned_cols=143 Identities=17% Similarity=0.130 Sum_probs=93.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhh----cC-C---------CcceEE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDS----LF-P---------LLREVK 161 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~----~~-~---------~~~~v~ 161 (398)
..||+|||| |.+|..++..++..|+ +|.| + |++++.++.-...+... .. . ....++
T Consensus 335 i~~v~ViGa-G~MG~gIA~~~a~~G~-----~V~l--~--d~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~ 404 (737)
T TIGR02441 335 VKTLAVLGA-GLMGAGIAQVSVDKGL-----KTVL--K--DATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLT 404 (737)
T ss_pred ccEEEEECC-CHhHHHHHHHHHhCCC-----cEEE--e--cCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE
Confidence 468999995 9999999999999886 4665 4 66666654321111111 00 0 112455
Q ss_pred EecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh-HHHHHHHHCCCCC
Q 015897 162 IGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT-NALICLKNAPSIP 240 (398)
Q Consensus 162 i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~-~t~~~~k~~~~~~ 240 (398)
.+ .++++++|||+||-+. .+|.++-+++.+.+.++++|++++ +||...+ ++.+. ... ..|
T Consensus 405 ~~-~~~~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~~il--asNTSsl~i~~la-~~~-~~p 465 (737)
T TIGR02441 405 PT-LDYSGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPHCII--ASNTSALPIKDIA-AVS-SRP 465 (737)
T ss_pred Ee-CCHHHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCCcEE--EEcCCCCCHHHHH-hhc-CCc
Confidence 54 4678999999999883 457889999999999998788877 8998775 44443 222 222
Q ss_pred CceEE------------------ecCchhHHHHHHHHHHHcCcCc
Q 015897 241 AKNFH------------------ALTRLDENRAKCQLALKAGVFY 267 (398)
Q Consensus 241 ~kvig------------------~gt~lDs~Rl~~~lA~~lgv~~ 267 (398)
.|++| ..|.-++.-.-..+++.+|..|
T Consensus 466 ~r~ig~Hff~P~~~m~LvEvv~g~~Ts~~~~~~~~~~~~~lgk~p 510 (737)
T TIGR02441 466 EKVIGMHYFSPVDKMQLLEIITHDGTSKDTLASAVAVGLKQGKVV 510 (737)
T ss_pred cceEEEeccCCcccCceEEEeCCCCCCHHHHHHHHHHHHHCCCeE
Confidence 23333 3466566555666778888554
No 55
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.15 E-value=1.8e-05 Score=77.47 Aligned_cols=105 Identities=14% Similarity=0.198 Sum_probs=66.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhh-------hc--CC--------Ccc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELED-------SL--FP--------LLR 158 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d-------~~--~~--------~~~ 158 (398)
..||+|||+ |.+|..++..++..|. +|.+ + |++++.++.....+.. .. .. ...
T Consensus 3 i~~I~ViGa-G~mG~~iA~~la~~G~-----~V~l--~--d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~ 72 (291)
T PRK06035 3 IKVIGVVGS-GVMGQGIAQVFARTGY-----DVTI--V--DVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMA 72 (291)
T ss_pred CcEEEEECc-cHHHHHHHHHHHhcCC-----eEEE--E--eCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHh
Confidence 468999995 9999999999999875 3544 3 6676666532221111 00 00 011
Q ss_pred eEEEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh
Q 015897 159 EVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT 227 (398)
Q Consensus 159 ~v~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~ 227 (398)
++..++ +++++++||+||.+... +.++.+++.+.+.+++.++++++ ||...+
T Consensus 73 ~i~~~~-~~~~~~~aDlVieav~e--------------~~~~k~~~~~~l~~~~~~~~il~--S~tsg~ 124 (291)
T PRK06035 73 RIRTST-SYESLSDADFIVEAVPE--------------KLDLKRKVFAELERNVSPETIIA--SNTSGI 124 (291)
T ss_pred CcEeeC-CHHHhCCCCEEEEcCcC--------------cHHHHHHHHHHHHhhCCCCeEEE--EcCCCC
Confidence 233433 45789999999998532 34566777777888766677664 555443
No 56
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=98.15 E-value=1.2e-05 Score=88.13 Aligned_cols=144 Identities=15% Similarity=0.151 Sum_probs=93.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh---h-hc-----C-----CCcceE
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE---D-SL-----F-----PLLREV 160 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~---d-~~-----~-----~~~~~v 160 (398)
+..||+|||| |.+|..+|..++..|+ +|.| + |.+++.++.-...+. + .. . .....+
T Consensus 312 ~i~~v~ViGa-G~mG~gIA~~~a~~G~-----~V~l--~--d~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 381 (714)
T TIGR02437 312 DVKQAAVLGA-GIMGGGIAYQSASKGT-----PIVM--K--DINQHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGI 381 (714)
T ss_pred ccceEEEECC-chHHHHHHHHHHhCCC-----eEEE--E--eCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCe
Confidence 3468999995 9999999999999886 4655 4 666665542111111 1 00 0 011245
Q ss_pred EEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh-HHHHHHHHCCCC
Q 015897 161 KIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT-NALICLKNAPSI 239 (398)
Q Consensus 161 ~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~-~t~~~~k~~~~~ 239 (398)
+.+ .++++++|||+||-+. .++.++-+++..++.++++|++++ +||...+ ++.+. ... ..
T Consensus 382 ~~~-~~~~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~il--asnTS~l~i~~ia-~~~-~~ 442 (714)
T TIGR02437 382 TPT-LSYAGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVREDAIL--ASNTSTISISLLA-KAL-KR 442 (714)
T ss_pred EEe-CCHHHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHH-hhc-CC
Confidence 554 4678899999999984 356889999999999998788877 9998775 44443 222 22
Q ss_pred CCceEE------------------ecCchhHHHHHHHHHHHcCcCc
Q 015897 240 PAKNFH------------------ALTRLDENRAKCQLALKAGVFY 267 (398)
Q Consensus 240 ~~kvig------------------~gt~lDs~Rl~~~lA~~lgv~~ 267 (398)
|.|++| ..|.-++.-.-..+++.+|..|
T Consensus 443 p~r~ig~Hff~P~~~~~lvEvv~g~~Ts~~~~~~~~~~~~~lgk~p 488 (714)
T TIGR02437 443 PENFCGMHFFNPVHRMPLVEVIRGEKSSDETIATVVAYASKMGKTP 488 (714)
T ss_pred cccEEEEecCCCcccCceEeecCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 223333 2355566555556677777554
No 57
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.14 E-value=1.4e-05 Score=78.29 Aligned_cols=106 Identities=16% Similarity=0.176 Sum_probs=65.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhc------CCC--------cceE
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSL------FPL--------LREV 160 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~------~~~--------~~~v 160 (398)
+.+||+|||+ |.+|..++..|+..|. +|.+ + |++++.++.....+.... ... ...+
T Consensus 3 ~~~kI~vIGa-G~mG~~iA~~la~~G~-----~V~l--~--d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i 72 (292)
T PRK07530 3 AIKKVGVIGA-GQMGNGIAHVCALAGY-----DVLL--N--DVSADRLEAGLATINGNLARQVAKGKISEEARAAALARI 72 (292)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC-----eEEE--E--eCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCe
Confidence 3569999995 9999999999998875 3554 4 667666654332222110 000 1224
Q ss_pred EEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh
Q 015897 161 KIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT 227 (398)
Q Consensus 161 ~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~ 227 (398)
+.+ ++++++++||+||.+... +..+.+.+.+.+.+++.++++++ ||...+
T Consensus 73 ~~~-~~~~~~~~aD~Vieavpe--------------~~~~k~~~~~~l~~~~~~~~ii~--s~ts~~ 122 (292)
T PRK07530 73 STA-TDLEDLADCDLVIEAATE--------------DETVKRKIFAQLCPVLKPEAILA--TNTSSI 122 (292)
T ss_pred Eee-CCHHHhcCCCEEEEcCcC--------------CHHHHHHHHHHHHhhCCCCcEEE--EcCCCC
Confidence 444 456789999999998421 23444555566777656677664 555443
No 58
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=98.13 E-value=1.7e-05 Score=77.62 Aligned_cols=106 Identities=16% Similarity=0.176 Sum_probs=64.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHH-------HHhhhc-C-C-----CcceE
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAM-------ELEDSL-F-P-----LLREV 160 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~-------DL~d~~-~-~-----~~~~v 160 (398)
++.||+|||+ |.+|..++..|+..|. +|.+ + |.+.+.++.... ++.+.. . . .....
T Consensus 3 ~~~~V~vIG~-G~mG~~iA~~l~~~G~-----~V~~--~--d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 72 (295)
T PLN02545 3 EIKKVGVVGA-GQMGSGIAQLAAAAGM-----DVWL--L--DSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRI 72 (295)
T ss_pred CcCEEEEECC-CHHHHHHHHHHHhcCC-----eEEE--E--eCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhce
Confidence 4579999995 9999999999998874 3544 4 666665542111 121110 0 0 00123
Q ss_pred EEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh
Q 015897 161 KIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT 227 (398)
Q Consensus 161 ~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~ 227 (398)
.. +++++++++||+||.+.. ++.++...+...+.+++.+++++ +||-..+
T Consensus 73 ~~-~~~~~~~~~aD~Vieav~--------------e~~~~k~~v~~~l~~~~~~~~il--~s~tS~i 122 (295)
T PLN02545 73 RC-TTNLEELRDADFIIEAIV--------------ESEDLKKKLFSELDRICKPSAIL--ASNTSSI 122 (295)
T ss_pred Ee-eCCHHHhCCCCEEEEcCc--------------cCHHHHHHHHHHHHhhCCCCcEE--EECCCCC
Confidence 33 346788999999999842 23455666666677765677765 4555443
No 59
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=98.12 E-value=1.6e-05 Score=86.96 Aligned_cols=110 Identities=10% Similarity=0.132 Sum_probs=74.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHh-cCcCCCCCceEEEecccccchhhHHHHHHHH----hhhcC-C---------CcceE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAA-GEVLGPDQPIALKLLGSERSLQALEGVAMEL----EDSLF-P---------LLREV 160 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~-~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL----~d~~~-~---------~~~~v 160 (398)
..||+|||| |.+|..+|..++. .|+ +|.| + |.+++.++.....+ ..... . ....+
T Consensus 304 i~~v~ViGa-G~mG~~iA~~~a~~~G~-----~V~l--~--d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 373 (699)
T TIGR02440 304 IKKVGILGG-GLMGGGIASVTATKAGI-----PVRI--K--DINPQGINNALKYAWKLLDKGVKRRHMTPAERDNQMALI 373 (699)
T ss_pred ccEEEEECC-cHHHHHHHHHHHHHcCC-----eEEE--E--eCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCe
Confidence 469999995 9999999999884 675 3554 4 55555544222111 11100 0 11345
Q ss_pred EEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh-HHHHH
Q 015897 161 KIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT-NALIC 232 (398)
Q Consensus 161 ~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~-~t~~~ 232 (398)
+.+ .++++++|||+||-+. .++.++-+++..++.+++.|++++ +||...+ ++.+.
T Consensus 374 ~~~-~~~~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~il--asnTS~l~i~~la 429 (699)
T TIGR02440 374 TGT-TDYRGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAHTIF--ASNTSSLPIGQIA 429 (699)
T ss_pred EEe-CChHHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCCcEE--EeCCCCCCHHHHH
Confidence 555 4578999999999984 446889999999999997778776 8998775 44443
No 60
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.12 E-value=1.6e-05 Score=87.05 Aligned_cols=143 Identities=14% Similarity=0.101 Sum_probs=92.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHH-hcCcCCCCCceEEEecccccchhhHHHHHHHHhhh---c------C-----CCcceE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLA-AGEVLGPDQPIALKLLGSERSLQALEGVAMELEDS---L------F-----PLLREV 160 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~-~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~---~------~-----~~~~~v 160 (398)
..||+|||| |.+|..+|..++ ..|+ +|.| + |.+.+.++.....+++. . . ....++
T Consensus 309 i~~v~ViGa-G~mG~giA~~~a~~~G~-----~V~l--~--d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 378 (708)
T PRK11154 309 VNKVGVLGG-GLMGGGIAYVTATKAGL-----PVRI--K--DINPQGINHALKYSWDLLDKKVKRRHLKPSERDKQMALI 378 (708)
T ss_pred ccEEEEECC-chhhHHHHHHHHHHcCC-----eEEE--E--eCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcE
Confidence 469999995 999999999998 7675 4554 4 55555544221111111 0 0 012356
Q ss_pred EEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh-HHHHHHHHCCCC
Q 015897 161 KIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT-NALICLKNAPSI 239 (398)
Q Consensus 161 ~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~-~t~~~~k~~~~~ 239 (398)
+.++ ++++++|||+||-+. .+|.++-+++...++++++|++++ +||...+ ++.+. ... ..
T Consensus 379 ~~~~-~~~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~il--asnTS~l~i~~la-~~~-~~ 439 (708)
T PRK11154 379 SGTT-DYRGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHTIF--ASNTSSLPIGQIA-AAA-AR 439 (708)
T ss_pred EEeC-ChHHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHH-Hhc-Cc
Confidence 6654 568999999999984 457899999999999998888887 8998775 44443 222 22
Q ss_pred CCceEE------------------ecCchhHHHHHHHHHHHcCcCc
Q 015897 240 PAKNFH------------------ALTRLDENRAKCQLALKAGVFY 267 (398)
Q Consensus 240 ~~kvig------------------~gt~lDs~Rl~~~lA~~lgv~~ 267 (398)
|.|++| -.|.-++.-.-..+++.+|..|
T Consensus 440 p~r~ig~Hff~P~~~~~lVEvv~g~~Ts~~~~~~~~~~~~~~gk~p 485 (708)
T PRK11154 440 PEQVIGLHYFSPVEKMPLVEVIPHAKTSAETIATTVALAKKQGKTP 485 (708)
T ss_pred ccceEEEecCCccccCceEEEECCCCCCHHHHHHHHHHHHHcCCce
Confidence 223333 3455555555555667777654
No 61
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=98.09 E-value=3.8e-05 Score=71.50 Aligned_cols=124 Identities=24% Similarity=0.237 Sum_probs=81.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
||+++|+| +|++|++++..++..+. +|.+ ..-+.++++++.+..+.-. + ......++.+.||+
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~-----eV~i---gs~r~~~~~~a~a~~l~~~-------i-~~~~~~dA~~~aDV 63 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGH-----EVII---GSSRGPKALAAAAAALGPL-------I-TGGSNEDAAALADV 63 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCC-----eEEE---ecCCChhHHHHHHHhhccc-------c-ccCChHHHHhcCCE
Confidence 68999999 59999999999999885 4654 2234566677666655422 1 23467899999999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch---------------hHHHHHHHHCCCCC
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN---------------TNALICLKNAPSIP 240 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d---------------~~t~~~~k~~~~~~ 240 (398)
||++.- ..-+.++.+.++.. -.+-+||-.|||.+ .-+++++++.|+-
T Consensus 64 VvLAVP----------------~~a~~~v~~~l~~~-~~~KIvID~tnp~~~~~~~~~~~~~~~~~saae~va~~lp~a- 125 (211)
T COG2085 64 VVLAVP----------------FEAIPDVLAELRDA-LGGKIVIDATNPIEVNGEPGDLYLVPSEGSAAEIVAKLLPGA- 125 (211)
T ss_pred EEEecc----------------HHHHHhHHHHHHHH-hCCeEEEecCCCccccCCccccccCCCCCcHHHHHHHHCCCc-
Confidence 999853 23444555555553 24788999999953 2355666665432
Q ss_pred CceEEecCchhHHHH
Q 015897 241 AKNFHALTRLDENRA 255 (398)
Q Consensus 241 ~kvig~gt~lDs~Rl 255 (398)
|++-....+...++
T Consensus 126 -kVVkAFn~i~a~~l 139 (211)
T COG2085 126 -KVVKAFNTIPAAVL 139 (211)
T ss_pred -chhhhhcccCHHHh
Confidence 55544444443333
No 62
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=98.08 E-value=6.9e-06 Score=66.52 Aligned_cols=95 Identities=22% Similarity=0.250 Sum_probs=65.9
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec-CcccccCCCcEE
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI-NPYELFEDAEWA 176 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~-~~~eal~dADiV 176 (398)
||+||| +|++|++++..|+..+. .. +.|.+. .++++++++..+.++. +.... +..+++++||+|
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~-~~-~~v~~~---~~r~~~~~~~~~~~~~---------~~~~~~~~~~~~~~advv 65 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGI-KP-HEVIIV---SSRSPEKAAELAKEYG---------VQATADDNEEAAQEADVV 65 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS--G-GEEEEE---EESSHHHHHHHHHHCT---------TEEESEEHHHHHHHTSEE
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCC-Cc-eeEEee---ccCcHHHHHHHHHhhc---------cccccCChHHhhccCCEE
Confidence 799999 59999999999999986 21 234431 3788888776665432 12233 678999999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
|++... +.+.++.+.+... .++..+|-++||
T Consensus 66 ilav~p----------------~~~~~v~~~i~~~-~~~~~vis~~ag 96 (96)
T PF03807_consen 66 ILAVKP----------------QQLPEVLSEIPHL-LKGKLVISIAAG 96 (96)
T ss_dssp EE-S-G----------------GGHHHHHHHHHHH-HTTSEEEEESTT
T ss_pred EEEECH----------------HHHHHHHHHHhhc-cCCCEEEEeCCC
Confidence 998632 3566666666333 578899988886
No 63
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.08 E-value=2.7e-05 Score=76.09 Aligned_cols=98 Identities=14% Similarity=0.189 Sum_probs=61.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcC-----C---------CcceEEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLF-----P---------LLREVKI 162 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~-----~---------~~~~v~i 162 (398)
.||+|||+ |.+|..+|..|+..|. +|.+ + |++++.++.....+..... . ....++.
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~-----~V~~--~--d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 71 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGF-----QTTL--V--DIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY 71 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCC-----cEEE--E--eCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE
Confidence 58999995 9999999999998875 3554 3 6666666543322111100 0 0123555
Q ss_pred ecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEE
Q 015897 163 GINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKV 218 (398)
Q Consensus 163 ~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~v 218 (398)
+++..+++++||+||.+... +..+.+.+...+.+++.+++++
T Consensus 72 ~~~~~~~~~~aD~Vi~avpe--------------~~~~k~~~~~~l~~~~~~~~il 113 (288)
T PRK09260 72 SLDLKAAVADADLVIEAVPE--------------KLELKKAVFETADAHAPAECYI 113 (288)
T ss_pred eCcHHHhhcCCCEEEEeccC--------------CHHHHHHHHHHHHhhCCCCcEE
Confidence 66666899999999998532 2344555555666765566654
No 64
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=98.03 E-value=2.8e-05 Score=82.13 Aligned_cols=106 Identities=13% Similarity=0.075 Sum_probs=68.3
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhh----c-CC---------Ccce
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDS----L-FP---------LLRE 159 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~----~-~~---------~~~~ 159 (398)
.+..||+|||| |.+|..+|..++..|+ ++.+ + |++++.++.....+++. . .. ....
T Consensus 5 ~~i~~V~VIGa-G~MG~gIA~~la~aG~-----~V~l--~--D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~ 74 (507)
T PRK08268 5 PSIATVAVIGA-GAMGAGIAQVAAQAGH-----TVLL--Y--DARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALAR 74 (507)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC-----eEEE--E--eCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhC
Confidence 35679999995 9999999999999886 3554 4 66767665321111111 0 00 1123
Q ss_pred EEEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 160 VKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 160 v~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
++.++ +++++++||+||.+. .++..+-+.+...+.+++++++++ +||...
T Consensus 75 i~~~~-~~~~~~~aDlViEav--------------~E~~~vK~~vf~~l~~~~~~~ail--asntSt 124 (507)
T PRK08268 75 LRPVE-ALADLADCDLVVEAI--------------VERLDVKQALFAQLEAIVSPDCIL--ATNTSS 124 (507)
T ss_pred eEEeC-CHHHhCCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCC
Confidence 55544 567899999999884 234566666667788875577766 555544
No 65
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=98.01 E-value=1.5e-05 Score=71.06 Aligned_cols=111 Identities=21% Similarity=0.164 Sum_probs=69.5
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcC---C---CcceEEEecCcccccC
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLF---P---LLREVKIGINPYELFE 171 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~---~---~~~~v~i~~~~~eal~ 171 (398)
||+|+|| |+.|.++|..|..++. .|.| + .++++.++..-.+ +... + +..++.+++|..++++
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~-----~V~l--~--~~~~~~~~~i~~~--~~n~~~~~~~~l~~~i~~t~dl~~a~~ 68 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGH-----EVTL--W--GRDEEQIEEINET--RQNPKYLPGIKLPENIKATTDLEEALE 68 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTE-----EEEE--E--TSCHHHHHHHHHH--TSETTTSTTSBEETTEEEESSHHHHHT
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC-----EEEE--E--eccHHHHHHHHHh--CCCCCCCCCcccCcccccccCHHHHhC
Confidence 8999995 9999999999999984 3655 4 4454444422221 2210 1 1135778888889999
Q ss_pred CCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC-----CchhHHHHHHHHC
Q 015897 172 DAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN-----PCNTNALICLKNA 236 (398)
Q Consensus 172 dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN-----P~d~~t~~~~k~~ 236 (398)
+||+||++.- ....+++.+.|..+..++..+|+++- ....+..++.+..
T Consensus 69 ~ad~IiiavP----------------s~~~~~~~~~l~~~l~~~~~ii~~~KG~~~~~~~~~~~~i~~~~ 122 (157)
T PF01210_consen 69 DADIIIIAVP----------------SQAHREVLEQLAPYLKKGQIIISATKGFEPGTLLLLSEVIEEIL 122 (157)
T ss_dssp T-SEEEE-S-----------------GGGHHHHHHHHTTTSHTT-EEEETS-SEETTEEEEHHHHHHHHH
T ss_pred cccEEEeccc----------------HHHHHHHHHHHhhccCCCCEEEEecCCcccCCCccHHHHHHHHh
Confidence 9999998742 35677888888887545666665542 2234555555554
No 66
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=97.97 E-value=3.2e-05 Score=81.50 Aligned_cols=106 Identities=16% Similarity=0.128 Sum_probs=69.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhh----hcC-C---------CcceE
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELED----SLF-P---------LLREV 160 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d----~~~-~---------~~~~v 160 (398)
+..||+|||+ |.+|..+|..++..|. ++.+ + |++++.++.....+++ ... . .+.++
T Consensus 4 ~~~kV~VIGa-G~MG~gIA~~la~aG~-----~V~l--~--d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i 73 (503)
T TIGR02279 4 NVVTVAVIGA-GAMGAGIAQVAASAGH-----QVLL--Y--DIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRL 73 (503)
T ss_pred CccEEEEECc-CHHHHHHHHHHHhCCC-----eEEE--E--eCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcc
Confidence 3568999995 9999999999999886 4554 4 6777766532111111 100 0 11235
Q ss_pred EEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh
Q 015897 161 KIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT 227 (398)
Q Consensus 161 ~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~ 227 (398)
+.++ +++++++||+||.+. .++..+-+.+...+.+++.|+++ ++||...+
T Consensus 74 ~~~~-~~~~l~~aDlVIEav--------------~E~~~vK~~vf~~l~~~~~~~~I--lasnTStl 123 (503)
T TIGR02279 74 IPVT-DLHALADAGLVIEAI--------------VENLEVKKALFAQLEELCPADTI--IASNTSSL 123 (503)
T ss_pred EEeC-CHHHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeE--EEECCCCC
Confidence 5544 568899999999984 23456777777778888656665 47777664
No 67
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=97.87 E-value=1.2e-05 Score=75.33 Aligned_cols=114 Identities=20% Similarity=0.228 Sum_probs=81.3
Q ss_pred ccCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHH----HHHHHHhhhcC------C-------
Q 015897 93 WKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALE----GVAMELEDSLF------P------- 155 (398)
Q Consensus 93 ~~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~----g~a~DL~d~~~------~------- 155 (398)
+.++..|+|+|| |.+|+.+|+--++.|+ ++.| + |.+++.|. +....+.+.+. +
T Consensus 8 ~~~~~~V~ivGa-G~MGSGIAQv~a~sg~-----~V~l--~--d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v 77 (298)
T KOG2304|consen 8 MAEIKNVAIVGA-GQMGSGIAQVAATSGL-----NVWL--V--DANEDALSRATKAISSSLKRVAKKKKADDPVALEEFV 77 (298)
T ss_pred cccccceEEEcc-cccchhHHHHHHhcCC-----ceEE--e--cCCHHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHH
Confidence 345678999995 9999999999999887 4665 4 66666653 23333322210 0
Q ss_pred --CcceEEEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh-HHHHH
Q 015897 156 --LLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT-NALIC 232 (398)
Q Consensus 156 --~~~~v~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~-~t~~~ 232 (398)
.+..+..+++-..+++|||+||.. ..+|++|-+++.+.|++.|.+++++ +||...+ ++.++
T Consensus 78 ~~~l~ri~~~tnv~~~v~dadliiEA--------------ivEn~diK~~lF~~l~~~ak~~~il--~tNTSSl~lt~ia 141 (298)
T KOG2304|consen 78 DDTLDRIKTSTNVSDAVSDADLIIEA--------------IVENLDIKRKLFKDLDKIAKSSTIL--ATNTSSLSLTDIA 141 (298)
T ss_pred HHHHHHHHHcCCHHHhhhhhHHHHHH--------------HHHhHHHHHHHHHHHHhhcccceEE--eecccceeHHHHH
Confidence 112345567778888999988766 5789999999999999998777776 8999776 45444
No 68
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=97.85 E-value=0.00012 Score=77.07 Aligned_cols=108 Identities=13% Similarity=0.152 Sum_probs=66.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhh---c-----CCC--cceEEEecC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDS---L-----FPL--LREVKIGIN 165 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~---~-----~~~--~~~v~i~~~ 165 (398)
.+||+|||+ |.+|+.++..|+..|. +|.+ + |+++++++.....+... . .+. ...+++.++
T Consensus 4 i~kIavIG~-G~MG~~iA~~la~~G~-----~V~v--~--D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~ 73 (495)
T PRK07531 4 IMKAACIGG-GVIGGGWAARFLLAGI-----DVAV--F--DPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCAS 73 (495)
T ss_pred cCEEEEECc-CHHHHHHHHHHHhCCC-----eEEE--E--eCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCC
Confidence 358999995 9999999999999886 3544 4 56666655332111100 0 001 123556666
Q ss_pred cccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHH
Q 015897 166 PYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNA 229 (398)
Q Consensus 166 ~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t 229 (398)
..+++++||+|+.+.. .+..+.+.+...+.+++.+++ |+.||...+..
T Consensus 74 ~~ea~~~aD~Vieavp--------------e~~~vk~~l~~~l~~~~~~~~--iI~SsTsgi~~ 121 (495)
T PRK07531 74 LAEAVAGADWIQESVP--------------ERLDLKRRVLAEIDAAARPDA--LIGSSTSGFLP 121 (495)
T ss_pred HHHHhcCCCEEEEcCc--------------CCHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCH
Confidence 6678999999998742 124455555556777654554 45777766543
No 69
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=97.79 E-value=5.2e-05 Score=69.68 Aligned_cols=113 Identities=17% Similarity=0.215 Sum_probs=61.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC--------------cceEEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL--------------LREVKI 162 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~--------------~~~v~i 162 (398)
|||+||| .|.||..+|..|+..|. .+. +.|+|+++.+.. +....++ ..+.+.
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~-----~V~----g~D~~~~~v~~l----~~g~~p~~E~~l~~ll~~~~~~~~l~~ 66 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGH-----QVI----GVDIDEEKVEAL----NNGELPIYEPGLDELLKENVSAGRLRA 66 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTS-----EEE----EE-S-HHHHHHH----HTTSSSS-CTTHHHHHHHHHHTTSEEE
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCC-----EEE----EEeCChHHHHHH----hhccccccccchhhhhccccccccchh
Confidence 6999999 69999999999999985 232 246776765533 2222111 135677
Q ss_pred ecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC-CCchhHH
Q 015897 163 GINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG-NPCNTNA 229 (398)
Q Consensus 163 ~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt-NP~d~~t 229 (398)
+++..+++++||++|++.+.|..++.+ .| ...+....+.|.++..++..||+=| =|..+.-
T Consensus 67 t~~~~~ai~~adv~~I~VpTP~~~~~~-~D-----ls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~ 128 (185)
T PF03721_consen 67 TTDIEEAIKDADVVFICVPTPSDEDGS-PD-----LSYVESAIESIAPVLRPGDLVVIESTVPPGTTE 128 (185)
T ss_dssp ESEHHHHHHH-SEEEE----EBETTTS-BE-----THHHHHHHHHHHHHHCSCEEEEESSSSSTTHHH
T ss_pred hhhhhhhhhccceEEEecCCCccccCC-cc-----HHHHHHHHHHHHHHHhhcceEEEccEEEEeeeh
Confidence 777778899999999998877544211 11 2233444444444444555544433 3444433
No 70
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=97.76 E-value=0.00027 Score=71.42 Aligned_cols=80 Identities=18% Similarity=0.135 Sum_probs=54.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHH--------HHhhhcC--CCcceEEEecCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAM--------ELEDSLF--PLLREVKIGINP 166 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~--------DL~d~~~--~~~~~v~i~~~~ 166 (398)
|||+|+| +|-||-..+-.|+..|. ++. ++ |+++++.+..-. .|++... ...++.+.|++-
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GH-----eVv--~v--Did~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~ 70 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGH-----EVV--CV--DIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDY 70 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCC-----eEE--EE--eCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCH
Confidence 6999999 69999999999998874 343 23 555566542211 0111110 111347888888
Q ss_pred ccccCCCcEEEEeCCCCCCC
Q 015897 167 YELFEDAEWALLIGAKPRGP 186 (398)
Q Consensus 167 ~eal~dADiViitag~~rk~ 186 (398)
.++++++|+++++.|.|.++
T Consensus 71 ~~a~~~adv~fIavgTP~~~ 90 (414)
T COG1004 71 EEAVKDADVVFIAVGTPPDE 90 (414)
T ss_pred HHHHhcCCEEEEEcCCCCCC
Confidence 88999999999999988665
No 71
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.72 E-value=0.00044 Score=69.39 Aligned_cols=116 Identities=14% Similarity=0.021 Sum_probs=74.8
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhc-CC----CcceEEEecCccc
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSL-FP----LLREVKIGINPYE 168 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~-~~----~~~~v~i~~~~~e 168 (398)
++++||+|+|| |.+|..++..|...+. +.+ + .++++..+..-.+-.... .+ +..++..+++..+
T Consensus 5 ~~~mkI~IiGa-Ga~G~alA~~La~~g~------v~l--~--~~~~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~ 73 (341)
T PRK12439 5 KREPKVVVLGG-GSWGTTVASICARRGP------TLQ--W--VRSAETADDINDNHRNSRYLGNDVVLSDTLRATTDFAE 73 (341)
T ss_pred cCCCeEEEECC-CHHHHHHHHHHHHCCC------EEE--E--eCCHHHHHHHHhcCCCcccCCCCcccCCCeEEECCHHH
Confidence 56789999995 9999999999998762 333 2 244444432222100000 01 1123556666677
Q ss_pred ccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh-----HHHHHHHHC
Q 015897 169 LFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT-----NALICLKNA 236 (398)
Q Consensus 169 al~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~-----~t~~~~k~~ 236 (398)
+++++|+||++.. .+.++++.+.+..+..++..+|.++|-.+. +..++.+..
T Consensus 74 a~~~aDlVilavp----------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~~t~~~~se~i~~~l 130 (341)
T PRK12439 74 AANCADVVVMGVP----------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQGTNMRMSQIIEEVL 130 (341)
T ss_pred HHhcCCEEEEEeC----------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcCCCCCcHHHHHHHHc
Confidence 8999999999853 346667777777665677889999998764 455665554
No 72
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.70 E-value=0.00027 Score=69.60 Aligned_cols=105 Identities=21% Similarity=0.261 Sum_probs=65.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcC----CCcceEEEecCcccccC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLF----PLLREVKIGINPYELFE 171 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~----~~~~~v~i~~~~~eal~ 171 (398)
|+||+|||+ |.+|..++..|+..+. ++.+ + |++++.++....+..+... .....+....+..+.++
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~-----~V~~--~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGH-----DVTL--W--ARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALA 70 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-----EEEE--E--ECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHh
Confidence 579999995 9999999999998764 3543 3 5666665544432111110 00112444455556888
Q ss_pred CCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 172 DAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 172 dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
++|+||++... ..+.++.+.+..+..++.++|..+|-.+
T Consensus 71 ~~D~vi~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~ 109 (325)
T PRK00094 71 DADLILVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIE 109 (325)
T ss_pred CCCEEEEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeeccc
Confidence 99999998531 2234444455554457788888887655
No 73
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.64 E-value=0.0004 Score=68.56 Aligned_cols=108 Identities=17% Similarity=0.192 Sum_probs=63.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHH-------HHhhhcC-------CCcceEE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAM-------ELEDSLF-------PLLREVK 161 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~-------DL~d~~~-------~~~~~v~ 161 (398)
++||+||| +|.+|..++..|+..|. +|.+ + |++++.++.... .+.+... .....++
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G~-----~V~v--~--d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~ 71 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAGH-----EVRL--W--DADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIR 71 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCCC-----eeEE--E--eCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeE
Confidence 46899999 59999999999999875 3544 3 666555443211 1111110 0112355
Q ss_pred EecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHH
Q 015897 162 IGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNA 229 (398)
Q Consensus 162 i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t 229 (398)
.+++..+++++||+|+.+... +..+.+.+...+.+...++.++ .||-.....
T Consensus 72 ~~~~~~~a~~~ad~Vi~avpe--------------~~~~k~~~~~~l~~~~~~~~ii--~ssts~~~~ 123 (308)
T PRK06129 72 VTDSLADAVADADYVQESAPE--------------NLELKRALFAELDALAPPHAIL--ASSTSALLA 123 (308)
T ss_pred EECcHHHhhCCCCEEEECCcC--------------CHHHHHHHHHHHHHhCCCcceE--EEeCCCCCH
Confidence 666666788999999987521 1334444555566653334333 466544433
No 74
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.60 E-value=0.00047 Score=73.40 Aligned_cols=118 Identities=14% Similarity=0.067 Sum_probs=70.1
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcC---C--CcceEE-----Ee
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLF---P--LLREVK-----IG 163 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~---~--~~~~v~-----i~ 163 (398)
++.+.|.|+||+|++|.+++..|+..|. .|.+ ++++.++++....++.+... . ...++. +.
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~-----~Vva----l~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLt 148 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGF-----RVRA----GVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLE 148 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-----eEEE----EeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCC
Confidence 3446899999999999999999998874 2443 25666666655544432100 0 000111 11
Q ss_pred c--CcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 164 I--NPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 164 ~--~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
. +..+++.++|+||.++|.......+-...+..|..-...+.+.+.+. + -+.||+++
T Consensus 149 D~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-g-VgRIV~VS 207 (576)
T PLN03209 149 KPDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-K-VNHFILVT 207 (576)
T ss_pred CHHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-C-CCEEEEEc
Confidence 1 12346789999999887653322222233556666777778777764 2 34566555
No 75
>PF11975 Glyco_hydro_4C: Family 4 glycosyl hydrolase C-terminal domain; InterPro: IPR022616 This domain is found primarily in bacterial family 4 glycosyl hydrolases. It is found in the C terminus. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1UP4_A 1UP6_C 1UP7_E 1VJT_A 1U8X_X 1S6Y_A 3FEF_D 1OBB_A.
Probab=97.60 E-value=9e-05 Score=70.34 Aligned_cols=56 Identities=18% Similarity=0.191 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhhcCCCCCcEEEEEEEeCCccCCCCCceEEEEeEEEcCCCceeeEeeccCC
Q 015897 335 AVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKKVTSVCREMVIMNL 395 (398)
Q Consensus 335 A~~I~~aI~~~~~~~~~~~i~~~sv~~~G~~ygip~dv~~svP~~ig~~Gv~~~~i~~l~L 395 (398)
+..++++|. +|++.++.+||.++|..-++|+|.++++||+|+++|++|..+.+||.
T Consensus 139 a~~~i~~i~-----~~~~~~~~vNv~N~G~I~nLp~davVEvp~~v~~~Gi~P~~~g~lP~ 194 (232)
T PF11975_consen 139 AEAAIEAIY-----NDKPKRFVVNVPNNGAIPNLPDDAVVEVPCYVDGDGIHPVAVGPLPP 194 (232)
T ss_dssp HHHHHHHHH-----HSSEEEEEEEEE-TTSSTTS-TTSEEEEEEEEETTEEEEB-SB---H
T ss_pred HHHHHHHHh-----cCCCeEEEEECCCCCccCCCCCCcEEEEEEEEcCCeeEeccCCCCCH
Confidence 445555553 68999999999999998999999999999999999999888888773
No 76
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.59 E-value=0.00028 Score=63.14 Aligned_cols=65 Identities=23% Similarity=0.296 Sum_probs=45.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
|+||+||| .|.+|+.++..|+..+. ++.. | |++.++++....+ . .....+..+.+++||+
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~-----~v~~--~--d~~~~~~~~~~~~----g------~~~~~s~~e~~~~~dv 60 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGY-----EVTV--Y--DRSPEKAEALAEA----G------AEVADSPAEAAEQADV 60 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTT-----EEEE--E--ESSHHHHHHHHHT----T------EEEESSHHHHHHHBSE
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCC-----eEEe--e--ccchhhhhhhHHh----h------hhhhhhhhhHhhcccc
Confidence 68999999 69999999999998875 3443 4 6776666544322 1 4455678899999999
Q ss_pred EEEeC
Q 015897 176 ALLIG 180 (398)
Q Consensus 176 Viita 180 (398)
||++-
T Consensus 61 vi~~v 65 (163)
T PF03446_consen 61 VILCV 65 (163)
T ss_dssp EEE-S
T ss_pred eEeec
Confidence 99874
No 77
>PRK07680 late competence protein ComER; Validated
Probab=97.53 E-value=0.00079 Score=65.25 Aligned_cols=100 Identities=11% Similarity=0.188 Sum_probs=65.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
|||+||| +|++|..++..|...+.+.. +.+.+ .|++.++++....++ + .+.+..+..+.++++|+|
T Consensus 1 m~I~iIG-~G~mG~ala~~L~~~g~~~~-~~v~v----~~r~~~~~~~~~~~~-----~---g~~~~~~~~~~~~~aDiV 66 (273)
T PRK07680 1 MNIGFIG-TGNMGTILIEAFLESGAVKP-SQLTI----TNRTPAKAYHIKERY-----P---GIHVAKTIEEVISQSDLI 66 (273)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCCCc-ceEEE----ECCCHHHHHHHHHHc-----C---CeEEECCHHHHHHhCCEE
Confidence 4799999 59999999999998874321 12443 367766654333211 1 234445666778999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
|++.. -..+.++.+.+..+..++.+||.++|++.
T Consensus 67 ilav~----------------p~~~~~vl~~l~~~l~~~~~iis~~ag~~ 100 (273)
T PRK07680 67 FICVK----------------PLDIYPLLQKLAPHLTDEHCLVSITSPIS 100 (273)
T ss_pred EEecC----------------HHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 99852 13344555555544346778999999764
No 78
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.41 E-value=0.0011 Score=65.85 Aligned_cols=115 Identities=15% Similarity=0.243 Sum_probs=71.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhc----CCCcceEEEecCccccc-C
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSL----FPLLREVKIGINPYELF-E 171 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~----~~~~~~v~i~~~~~eal-~ 171 (398)
|||+|||| |.+|+.++..|...+. +|.+ + +++++.++....+-.+.. ..+...+..+++..+++ .
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~-----~V~l--~--~r~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 70 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKI-----SVNL--W--GRNHTTFESINTKRKNLKYLPTCHLPDNISVKSAIDEVLSD 70 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCC-----eEEE--E--ecCHHHHHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHHhC
Confidence 48999995 9999999999998873 3654 3 566555543333210111 01112455666666666 5
Q ss_pred CCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHH-hcCCCeEEEEECCCchh-----HHHHHHHHCC
Q 015897 172 DAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNA-VASRNVKVIVVGNPCNT-----NALICLKNAP 237 (398)
Q Consensus 172 dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~-~a~p~a~vIvvtNP~d~-----~t~~~~k~~~ 237 (398)
++|+||++.. ..-+.++.+.+.. +..++..||..+|=.+. ...++.+..|
T Consensus 71 ~~Dliiiavk----------------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi~~~~~~~~~~~l~~~~~ 126 (326)
T PRK14620 71 NATCIILAVP----------------TQQLRTICQQLQDCHLKKNTPILICSKGIEKSSLKFPSEIVNEILP 126 (326)
T ss_pred CCCEEEEEeC----------------HHHHHHHHHHHHHhcCCCCCEEEEEEcCeeCCCCccHHHHHHHHcC
Confidence 8999999853 2445566666665 43567788888888743 2445555543
No 79
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=97.40 E-value=0.0013 Score=65.33 Aligned_cols=124 Identities=12% Similarity=0.032 Sum_probs=81.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc----ceEEEecCccccc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL----REVKIGINPYELF 170 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~----~~v~i~~~~~eal 170 (398)
..++|+|+||+|+||++++..|+++|. .|.- .+ .|...++-..+..+|+... ..+ .++.-...-.+++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-----~V~g-tV-R~~~~~k~~~~L~~l~~a~-~~l~l~~aDL~d~~sf~~ai 76 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-----TVRG-TV-RDPEDEKKTEHLRKLEGAK-ERLKLFKADLLDEGSFDKAI 76 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-----EEEE-EE-cCcchhhhHHHHHhcccCc-ccceEEeccccccchHHHHH
Confidence 457999999999999999999999997 2321 12 2332233333566666433 212 1222222346889
Q ss_pred CCCcEEEEeCCCCCCCCC-chhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhH
Q 015897 171 EDAEWALLIGAKPRGPGM-ERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTN 228 (398)
Q Consensus 171 ~dADiViitag~~rk~g~-~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~ 228 (398)
++||.|+.+|...--... ...++++-.++-...+.+.+.+. +..+=+|+|.-+..+
T Consensus 77 ~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~--~sVkrvV~TSS~aAv 133 (327)
T KOG1502|consen 77 DGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKT--KSVKRVVYTSSTAAV 133 (327)
T ss_pred hCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhcc--CCcceEEEeccHHHh
Confidence 999999999864321122 24467888888899999999996 367777788765543
No 80
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.37 E-value=0.001 Score=66.09 Aligned_cols=102 Identities=22% Similarity=0.244 Sum_probs=62.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhc----CCCcceEEEecCccccc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSL----FPLLREVKIGINPYELF 170 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~----~~~~~~v~i~~~~~eal 170 (398)
.+|||+|||+ |.+|..++..|+..+. +|.+ + ++++++++.....-.... .....++..+.+..+++
T Consensus 3 ~~m~I~iIG~-G~mG~~ia~~L~~~G~-----~V~~--~--~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~ 72 (328)
T PRK14618 3 HGMRVAVLGA-GAWGTALAVLAASKGV-----PVRL--W--ARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL 72 (328)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCC-----eEEE--E--eCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH
Confidence 3679999995 9999999999998874 3544 3 566665554432211100 01111244555666788
Q ss_pred CCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 171 EDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 171 ~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
+++|+||++.... .++++. +.. .++.++|.++|..+
T Consensus 73 ~~aD~Vi~~v~~~----------------~~~~v~---~~l-~~~~~vi~~~~Gi~ 108 (328)
T PRK14618 73 AGADFAVVAVPSK----------------ALRETL---AGL-PRALGYVSCAKGLA 108 (328)
T ss_pred cCCCEEEEECchH----------------HHHHHH---Hhc-CcCCEEEEEeeccc
Confidence 9999999874311 123333 222 46778888888643
No 81
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.34 E-value=0.0021 Score=60.95 Aligned_cols=102 Identities=16% Similarity=0.112 Sum_probs=60.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
+.+||+||| +|++|.+++..|+..+.... +.+. .++ +.+.++++....++ .+..+.+..+.++++|
T Consensus 3 ~~~kI~iIG-~G~mg~ala~~l~~~~~~~~-~~i~--~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~D 68 (245)
T PRK07634 3 KKHRILFIG-AGRMAEAIFSGLLKTSKEYI-EEII--VSN-RSNVEKLDQLQARY---------NVSTTTDWKQHVTSVD 68 (245)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHhCCCCCc-CeEE--EEC-CCCHHHHHHHHHHc---------CcEEeCChHHHHhcCC
Confidence 457999999 59999999999987763221 1132 221 22445554333221 1234456667789999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT 227 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~ 227 (398)
+||++.. -+..+++.+.+..+- ++..||.++.-.+.
T Consensus 69 iViiavp----------------~~~~~~v~~~l~~~~-~~~~vis~~~gi~~ 104 (245)
T PRK07634 69 TIVLAMP----------------PSAHEELLAELSPLL-SNQLVVTVAAGIGP 104 (245)
T ss_pred EEEEecC----------------HHHHHHHHHHHHhhc-cCCEEEEECCCCCH
Confidence 9999843 133455555555432 34466666665543
No 82
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.34 E-value=0.0027 Score=66.01 Aligned_cols=93 Identities=15% Similarity=0.160 Sum_probs=58.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
|||+||||+|.+|..++..|...|. .+.+ + |++.+.+...+.++ . +....+..+++.+||+|
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~-----~V~v--~--~r~~~~~~~~a~~~-----g----v~~~~~~~e~~~~aDvV 62 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF-----EVIV--T--GRDPKKGKEVAKEL-----G----VEYANDNIDAAKDADIV 62 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC-----EEEE--E--ECChHHHHHHHHHc-----C----CeeccCHHHHhccCCEE
Confidence 5899998679999999999988774 2443 3 56655544333332 1 22344566788999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
|++... ..+.++.+.+..+..++++|+.++.
T Consensus 63 Ilavp~----------------~~~~~vl~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 63 IISVPI----------------NVTEDVIKEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred EEecCH----------------HHHHHHHHHHHhhCCCCCEEEEccc
Confidence 998531 2223333444443346777777775
No 83
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=97.34 E-value=0.0015 Score=67.22 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=50.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCC---------C-cceEEEecCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFP---------L-LREVKIGINP 166 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~---------~-~~~v~i~~~~ 166 (398)
|||+||| +|.+|..++..|+..|. .|.. + |++.++++...........+ . ...++.+++.
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~-----~V~~--~--d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~ 70 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGH-----EVTG--V--DIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDY 70 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCC-----eEEE--E--ECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCH
Confidence 4899999 59999999999998875 2433 3 66666655333210000000 0 1225555555
Q ss_pred ccccCCCcEEEEeCCCCC
Q 015897 167 YELFEDAEWALLIGAKPR 184 (398)
Q Consensus 167 ~eal~dADiViitag~~r 184 (398)
.+++++||+||++...|.
T Consensus 71 ~~~~~~advvii~vpt~~ 88 (411)
T TIGR03026 71 EDAIRDADVIIICVPTPL 88 (411)
T ss_pred HHHHhhCCEEEEEeCCCC
Confidence 678999999999987664
No 84
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=97.33 E-value=0.0015 Score=65.65 Aligned_cols=106 Identities=16% Similarity=0.130 Sum_probs=64.5
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCC---CceEEEeccccc---chhhHHHHHHHHhhhcC----CCcceEEEecCcc
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPD---QPIALKLLGSER---SLQALEGVAMELEDSLF----PLLREVKIGINPY 167 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~---~~i~L~L~d~D~---~~~~l~g~a~DL~d~~~----~~~~~v~i~~~~~ 167 (398)
||+|||| |+.|.++|..|+.++....+ ++|.| +..+. +++..+..-.+.+...+ .+..+++.+++..
T Consensus 1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~~V~l--w~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~ 77 (342)
T TIGR03376 1 RVAVVGS-GNWGTAIAKIVAENARALPELFEESVRM--WVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLV 77 (342)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCcccccCCceEEE--EEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHH
Confidence 6999995 99999999999987732221 35665 33321 22222222211111110 1123567777778
Q ss_pred cccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 168 ELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 168 eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
+++++||+||++.- .+.++++++.+..+-.++..+|.++
T Consensus 78 eal~~ADiIIlAVP----------------s~~i~~vl~~l~~~l~~~~~iVs~t 116 (342)
T TIGR03376 78 EAAKGADILVFVIP----------------HQFLEGICKQLKGHVKPNARAISCI 116 (342)
T ss_pred HHHhcCCEEEEECC----------------hHHHHHHHHHHHhhcCCCCEEEEEe
Confidence 89999999998742 4677777777776544555666665
No 85
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.32 E-value=0.0011 Score=57.41 Aligned_cols=83 Identities=22% Similarity=0.253 Sum_probs=47.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
..+||+|||| |+||.+|+..|...+. .|.- ++ .++.+..+..+..+. ...+ .+..+.+.+||
T Consensus 9 ~~l~I~iIGa-GrVG~~La~aL~~ag~-----~v~~-v~--srs~~sa~~a~~~~~--------~~~~-~~~~~~~~~aD 70 (127)
T PF10727_consen 9 ARLKIGIIGA-GRVGTALARALARAGH-----EVVG-VY--SRSPASAERAAAFIG--------AGAI-LDLEEILRDAD 70 (127)
T ss_dssp ---EEEEECT-SCCCCHHHHHHHHTTS-----EEEE-ES--SCHH-HHHHHHC--T--------T------TTGGGCC-S
T ss_pred CccEEEEECC-CHHHHHHHHHHHHCCC-----eEEE-EE--eCCcccccccccccc--------cccc-cccccccccCC
Confidence 3579999995 9999999999998875 2432 23 344433332222111 1222 34678899999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHh
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAV 211 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~ 211 (398)
++|++... ..+.++++.|..+
T Consensus 71 lv~iavpD----------------daI~~va~~La~~ 91 (127)
T PF10727_consen 71 LVFIAVPD----------------DAIAEVAEQLAQY 91 (127)
T ss_dssp EEEE-S-C----------------CHHHHHHHHHHCC
T ss_pred EEEEEech----------------HHHHHHHHHHHHh
Confidence 99998532 2566777777764
No 86
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.32 E-value=0.002 Score=61.95 Aligned_cols=99 Identities=19% Similarity=0.266 Sum_probs=61.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
|||+||| .|++|..++..|+..+...+ ..|. .+ .|++.++++. +.+. .+.+..+..+.++++|+|
T Consensus 1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~-~~i~--v~-~~r~~~~~~~----~~~~------g~~~~~~~~e~~~~aDvV 65 (266)
T PLN02688 1 FRVGFIG-AGKMAEAIARGLVASGVVPP-SRIS--TA-DDSNPARRDV----FQSL------GVKTAASNTEVVKSSDVI 65 (266)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHCCCCCc-ceEE--EE-eCCCHHHHHH----HHHc------CCEEeCChHHHHhcCCEE
Confidence 5899999 59999999999998875332 1233 23 1566665432 2211 123445666778999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
|++. .| +.+.++.+.+.....++..||..++...
T Consensus 66 il~v-~~---------------~~~~~vl~~l~~~~~~~~~iIs~~~g~~ 99 (266)
T PLN02688 66 ILAV-KP---------------QVVKDVLTELRPLLSKDKLLVSVAAGIT 99 (266)
T ss_pred EEEE-Cc---------------HHHHHHHHHHHhhcCCCCEEEEecCCCc
Confidence 9986 22 3444555555444346677776666543
No 87
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.30 E-value=0.0023 Score=64.98 Aligned_cols=107 Identities=11% Similarity=0.092 Sum_probs=67.7
Q ss_pred ccCCCEEEEEcCCCchHHHHHHHHHhcCc----CCCCCceEEEecccccchh-hHHHHHHHHhhhc--C------CCcce
Q 015897 93 WKKMVNIAVSGAAGMIANHLLFKLAAGEV----LGPDQPIALKLLGSERSLQ-ALEGVAMELEDSL--F------PLLRE 159 (398)
Q Consensus 93 ~~~~~KI~IiGA~G~vG~~la~~L~~~~~----~~~~~~i~L~L~d~D~~~~-~l~g~a~DL~d~~--~------~~~~~ 159 (398)
..+.+||+|||| |.-|+++|..|..++. |+ ++|.|.. .| ++ .-+..+.++++.. . .+..+
T Consensus 8 ~~~~~ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~--~~V~lw~--~~--~~~~~~~~~~~in~~~~N~~ylp~~~Lp~n 80 (365)
T PTZ00345 8 RCGPLKVSVIGS-GNWGSAISKVVGENTQRNYIFH--NEVRMWV--LE--EIVEGEKLSDIINTKHENVKYLPGIKLPDN 80 (365)
T ss_pred ccCCCeEEEECC-CHHHHHHHHHHHhcCCcccCCC--CeEEEEE--ec--ccccchHHHHHHHhcCCCcccCCCCcCCCc
Confidence 455689999995 9999999999998763 22 2466532 22 22 1112344444321 1 12246
Q ss_pred EEEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHH--hcCCCeEEEEEC
Q 015897 160 VKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNA--VASRNVKVIVVG 222 (398)
Q Consensus 160 v~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~--~a~p~a~vIvvt 222 (398)
+..++|..+++++||+||++.- .+.++++++.++. +..++..+|.++
T Consensus 81 i~~tsdl~eav~~aDiIvlAVP----------------sq~l~~vl~~l~~~~~l~~~~~iIS~a 129 (365)
T PTZ00345 81 IVAVSDLKEAVEDADLLIFVIP----------------HQFLESVLSQIKENNNLKKHARAISLT 129 (365)
T ss_pred eEEecCHHHHHhcCCEEEEEcC----------------hHHHHHHHHHhccccccCCCCEEEEEe
Confidence 7777777889999999988742 3677788888876 423455565554
No 88
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.26 E-value=0.0025 Score=62.03 Aligned_cols=99 Identities=16% Similarity=0.266 Sum_probs=62.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
+||+||| +|++|.+++..|+..+.+..+ .|.. .|++.++++....++ + +.+..+..+.+++||+|
T Consensus 3 ~~IgfIG-~G~MG~aia~~L~~~g~~~~~-~I~v----~~r~~~~~~~l~~~~-----g----~~~~~~~~e~~~~aDiI 67 (272)
T PRK12491 3 KQIGFIG-CGNMGIAMIGGMINKNIVSPD-QIIC----SDLNVSNLKNASDKY-----G----ITITTNNNEVANSADIL 67 (272)
T ss_pred CeEEEEC-ccHHHHHHHHHHHHCCCCCCc-eEEE----ECCCHHHHHHHHHhc-----C----cEEeCCcHHHHhhCCEE
Confidence 4899999 599999999999988854321 2432 467766655333211 1 23445666778999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
|++.. | +.+.++.+.+..+..++.+||-+.--++
T Consensus 68 iLavk-P---------------~~~~~vl~~l~~~~~~~~lvISi~AGi~ 101 (272)
T PRK12491 68 ILSIK-P---------------DLYSSVINQIKDQIKNDVIVVTIAAGKS 101 (272)
T ss_pred EEEeC-h---------------HHHHHHHHHHHHhhcCCcEEEEeCCCCc
Confidence 98853 1 3445555555554345667766665543
No 89
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=97.26 E-value=0.0026 Score=66.04 Aligned_cols=113 Identities=12% Similarity=0.116 Sum_probs=69.2
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-cC-cccccC
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-IN-PYELFE 171 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~~-~~eal~ 171 (398)
++.|||.|+||+|+||++++..|+..|. .|.. + |+...........+. .. ..+.+. .| ..+.+.
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~-----~V~~--l--dr~~~~~~~~~~~~~----~~-~~~~~~~~Di~~~~~~ 183 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGD-----EVIV--I--DNFFTGRKENLVHLF----GN-PRFELIRHDVVEPILL 183 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCC-----EEEE--E--eCCCCccHhHhhhhc----cC-CceEEEECcccccccc
Confidence 4568999999999999999999998874 2432 2 322111010111111 00 012111 11 234577
Q ss_pred CCcEEEEeCCCCC--CCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 172 DAEWALLIGAKPR--GPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 172 dADiViitag~~r--k~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
++|+||.+++... ....+..+.+..|+.-...+.+.+++. + ..+|.++.
T Consensus 184 ~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g--~r~V~~SS 234 (436)
T PLN02166 184 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-G--ARFLLTST 234 (436)
T ss_pred CCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-C--CEEEEECc
Confidence 8999999987532 122345677889999999999999885 3 46666654
No 90
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=97.26 E-value=0.0019 Score=67.70 Aligned_cols=119 Identities=13% Similarity=0.187 Sum_probs=68.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHH--------hhhcCC-CcceEEEecCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMEL--------EDSLFP-LLREVKIGINP 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL--------~d~~~~-~~~~v~i~~~~ 166 (398)
||||+||| +|.||..++-.|+..|. + ..+. . +|+++++++..-... ++.... ..+..+.+++.
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~-g--~~V~--g--vD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~ 72 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCP-D--IEVV--V--VDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDV 72 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCC-C--CeEE--E--EECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCH
Confidence 57999999 59999999999998753 1 0233 2 366767765432211 110000 11236677777
Q ss_pred ccccCCCcEEEEeCCCCCCC-C---CchhhhHHHHHHHHHHHHHHHHHhcCCCeEEE-EECCCchh
Q 015897 167 YELFEDAEWALLIGAKPRGP-G---MERAGLLDINGQIFAEQGKALNAVASRNVKVI-VVGNPCNT 227 (398)
Q Consensus 167 ~eal~dADiViitag~~rk~-g---~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vI-vvtNP~d~ 227 (398)
.+++++||++|++.+.|..+ | .... +..-+.+.++.|.++..++.+|| =-|-|..+
T Consensus 73 ~~~i~~advi~I~V~TP~~~~g~~~~~~~-----Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gt 133 (473)
T PLN02353 73 EKHVAEADIVFVSVNTPTKTRGLGAGKAA-----DLTYWESAARMIADVSKSDKIVVEKSTVPVKT 133 (473)
T ss_pred HHHHhcCCEEEEEeCCCCCCCCCcCCCCC-----cHHHHHHHHHHHHhhCCCCcEEEEeCCCCCCh
Confidence 78899999999999888543 2 1122 23345555555555532333322 22556554
No 91
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=97.24 E-value=0.0014 Score=63.92 Aligned_cols=106 Identities=16% Similarity=0.103 Sum_probs=61.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHH-HhhhcCCCcc---eEEEecCcccccCC
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAME-LEDSLFPLLR---EVKIGINPYELFED 172 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~D-L~d~~~~~~~---~v~i~~~~~eal~d 172 (398)
|||+|+|+ |.+|..++..|...+. .|.+ + ++ +++++....+ +. ....... .....++..+..++
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~-----~V~~--~--~r-~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 68 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGR-----DVTF--L--VR-PKRAKALRERGLV-IRSDHGDAVVPGPVITDPEELTGP 68 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCC-----ceEE--E--ec-HHHHHHHHhCCeE-EEeCCCeEEecceeecCHHHccCC
Confidence 58999995 9999999999998764 3554 2 45 4554433211 00 0000000 11122333444589
Q ss_pred CcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHH
Q 015897 173 AEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNAL 230 (398)
Q Consensus 173 ADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~ 230 (398)
+|+||++...+ -..++.+.+..+..++..||.+.|..+....
T Consensus 69 ~d~vilavk~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~~~~~ 110 (305)
T PRK12921 69 FDLVILAVKAY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIGQLEQ 110 (305)
T ss_pred CCEEEEEeccc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCChHHH
Confidence 99999985321 2334444555543567888889999865443
No 92
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.22 E-value=0.0023 Score=61.52 Aligned_cols=97 Identities=22% Similarity=0.233 Sum_probs=62.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
|+||+|||+ |.+|..++..|...+... ..+.+ .|++.+.++.....+ .+.+..+..+.+.++|+
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~--~~v~v----~~r~~~~~~~~~~~~---------g~~~~~~~~~~~~~adv 65 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPA--KDIIV----SDPSPEKRAALAEEY---------GVRAATDNQEAAQEADV 65 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCc--ceEEE----EcCCHHHHHHHHHhc---------CCeecCChHHHHhcCCE
Confidence 578999995 999999999998876411 12333 367766654333221 12234455667889999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
||++.. ...+.++.+.+..+ . +..||.++|-..
T Consensus 66 Vil~v~----------------~~~~~~v~~~l~~~-~-~~~vvs~~~gi~ 98 (267)
T PRK11880 66 VVLAVK----------------PQVMEEVLSELKGQ-L-DKLVVSIAAGVT 98 (267)
T ss_pred EEEEcC----------------HHHHHHHHHHHHhh-c-CCEEEEecCCCC
Confidence 999852 24566666666654 2 567777777654
No 93
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=97.22 E-value=0.0018 Score=64.35 Aligned_cols=112 Identities=20% Similarity=0.218 Sum_probs=77.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhh--cCCCc------ceEEEecCcc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDS--LFPLL------REVKIGINPY 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~--~~~~~------~~v~i~~~~~ 167 (398)
++||+|+|| |.=|++||..|+.++. ++.| . .++++.. .||... ...++ ..+..++|..
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~-----~V~l--w--~r~~~~~----~~i~~~~~N~~yLp~i~lp~~l~at~Dl~ 66 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGH-----EVRL--W--GRDEEIV----AEINETRENPKYLPGILLPPNLKATTDLA 66 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCC-----eeEE--E--ecCHHHH----HHHHhcCcCccccCCccCCcccccccCHH
Confidence 579999995 9999999999999883 4655 3 3444433 333332 21122 3566778899
Q ss_pred cccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC-----CchhHHHHHHHHCC
Q 015897 168 ELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN-----PCNTNALICLKNAP 237 (398)
Q Consensus 168 eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN-----P~d~~t~~~~k~~~ 237 (398)
+++++||+|++..- .+.+++++++++.+-.++.+++.++. ....++.++.+..|
T Consensus 67 ~a~~~ad~iv~avP----------------s~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~~l~seii~e~l~ 125 (329)
T COG0240 67 EALDGADIIVIAVP----------------SQALREVLRQLKPLLLKDAIIVSATKGLEPETGRLLSEIIEEELP 125 (329)
T ss_pred HHHhcCCEEEEECC----------------hHHHHHHHHHHhhhccCCCeEEEEeccccCCCcchHHHHHHHHcC
Confidence 99999999999742 46778888888655457888888773 44567777777654
No 94
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.21 E-value=0.0017 Score=55.24 Aligned_cols=96 Identities=22% Similarity=0.226 Sum_probs=56.0
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEeccccc-chhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSER-SLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~-~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
||+|+||+|.+|..++..|....-+. +. .++.... ..+.+. +..... ....+..+...+.+.+.++|+|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e----~~-~~~~~~~~~g~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~Dvv 70 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFE----LV-ALVSSSRSAGKPLS----EVFPHP-KGFEDLSVEDADPEELSDVDVV 70 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEE----EE-EEEESTTTTTSBHH----HTTGGG-TTTEEEBEEETSGHHHTTESEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCcc----EE-EeeeeccccCCeee----hhcccc-ccccceeEeecchhHhhcCCEE
Confidence 79999999999999999998855432 22 2232221 011111 111101 1112444544678888999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
|++.+ .....++++.+.+ .+.+||-.|
T Consensus 71 f~a~~----------------~~~~~~~~~~~~~---~g~~ViD~s 97 (121)
T PF01118_consen 71 FLALP----------------HGASKELAPKLLK---AGIKVIDLS 97 (121)
T ss_dssp EE-SC----------------HHHHHHHHHHHHH---TTSEEEESS
T ss_pred EecCc----------------hhHHHHHHHHHhh---CCcEEEeCC
Confidence 99864 3456666666644 456665554
No 95
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=97.21 E-value=0.0027 Score=65.01 Aligned_cols=76 Identities=11% Similarity=0.139 Sum_probs=47.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCC--------CcceEEEecCccc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFP--------LLREVKIGINPYE 168 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~--------~~~~v~i~~~~~e 168 (398)
|||+||| +|.||..++..++. |. ++.. .|+++++++..........-+ ....++.+++..+
T Consensus 1 mkI~VIG-lGyvGl~~A~~lA~-G~-----~Vig----vD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~ 69 (388)
T PRK15057 1 MKITISG-TGYVGLSNGLLIAQ-NH-----EVVA----LDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNE 69 (388)
T ss_pred CEEEEEC-CCHHHHHHHHHHHh-CC-----cEEE----EECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhh
Confidence 4899999 59999999977764 52 2443 367777765443211110000 1123444455678
Q ss_pred ccCCCcEEEEeCCCC
Q 015897 169 LFEDAEWALLIGAKP 183 (398)
Q Consensus 169 al~dADiViitag~~ 183 (398)
+.++||+||++...|
T Consensus 70 ~~~~ad~vii~Vpt~ 84 (388)
T PRK15057 70 AYRDADYVIIATPTD 84 (388)
T ss_pred hhcCCCEEEEeCCCC
Confidence 889999999987655
No 96
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.18 E-value=0.002 Score=62.74 Aligned_cols=104 Identities=17% Similarity=0.173 Sum_probs=61.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEE---EecCcccccCC
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVK---IGINPYELFED 172 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~---i~~~~~eal~d 172 (398)
|||+|+|| |.+|..++..|...|. +|.+ ++++.+.++....+ .. .. ..... ...++.++.++
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~-----~V~~----~~r~~~~~~~~~~~---g~-~~~~~~~~~~~~~~~~~~~~~~ 66 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGH-----DVTL----VARRGAHLDALNEN---GL-RLEDGEITVPVLAADDPAELGP 66 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-----eEEE----EECChHHHHHHHHc---CC-cccCCceeecccCCCChhHcCC
Confidence 58999995 9999999999998763 3654 25554554433221 11 11 11111 11233444599
Q ss_pred CcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHH
Q 015897 173 AEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNAL 230 (398)
Q Consensus 173 ADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~ 230 (398)
+|+||++.... -..++.+.+..+-.++..||...|.++....
T Consensus 67 ~d~vila~k~~----------------~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~~ 108 (304)
T PRK06522 67 QDLVILAVKAY----------------QLPAALPSLAPLLGPDTPVLFLQNGVGHLEE 108 (304)
T ss_pred CCEEEEecccc----------------cHHHHHHHHhhhcCCCCEEEEecCCCCcHHH
Confidence 99999985321 1233444444433467889999999775543
No 97
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.16 E-value=0.0023 Score=62.28 Aligned_cols=66 Identities=23% Similarity=0.270 Sum_probs=43.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
|||+||| .|.+|..++..|...+. .|.+ .|++++.++. +.+.. . +.....+.+++++||+|
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~-----~V~~----~d~~~~~~~~-a~~~g--~------~~~~~~~~~~~~~aDlV 61 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGH-----TVYG----VSRRESTCER-AIERG--L------VDEASTDLSLLKDCDLV 61 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCC-----EEEE----EECCHHHHHH-HHHCC--C------cccccCCHhHhcCCCEE
Confidence 4899999 59999999999988764 2443 3666655542 22211 0 11123345678999999
Q ss_pred EEeCC
Q 015897 177 LLIGA 181 (398)
Q Consensus 177 iitag 181 (398)
|++..
T Consensus 62 ilavp 66 (279)
T PRK07417 62 ILALP 66 (279)
T ss_pred EEcCC
Confidence 99853
No 98
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.15 E-value=0.0065 Score=58.90 Aligned_cols=116 Identities=20% Similarity=0.106 Sum_probs=77.2
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-cC-------
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-IN------- 165 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~~------- 165 (398)
+++.++.|+||++.||..+|..|+.+|. .+.| +.+++++|+..+.+|++.. .. ++.+. .|
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-----~liL----vaR~~~kL~~la~~l~~~~-~v--~v~vi~~DLs~~~~~ 71 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-----NLIL----VARREDKLEALAKELEDKT-GV--EVEVIPADLSDPEAL 71 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-----EEEE----EeCcHHHHHHHHHHHHHhh-Cc--eEEEEECcCCChhHH
Confidence 3456899999999999999999999986 3444 4799999999999999743 21 22211 11
Q ss_pred ------cccccCCCcEEEEeCCCCCCC------CCchhhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 166 ------PYELFEDAEWALLIGAKPRGP------GMERAGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 166 ------~~eal~dADiViitag~~rk~------g~~r~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
..+..-+.|+.|..+|...-. ..+-.+++.-|+- +.+.+.+.+.+. ..|-|||++-
T Consensus 72 ~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~--~~G~IiNI~S 143 (265)
T COG0300 72 ERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER--GAGHIINIGS 143 (265)
T ss_pred HHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCceEEEEec
Confidence 112223689999998875321 1234466666654 445555666663 4577777763
No 99
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=97.11 E-value=0.0014 Score=66.28 Aligned_cols=129 Identities=19% Similarity=0.221 Sum_probs=72.8
Q ss_pred CcceeeEEeeccchhHhhhhccCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhh
Q 015897 73 DCYGVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDS 152 (398)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~ 152 (398)
|.||.+++-- ...++ .++.+.+||.|+||+|+||++++..|...|. .|.. +++..... . ...
T Consensus 1 ~~~~~~~~~~-~~~~~--~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~-----~V~~----v~r~~~~~---~---~~~ 62 (370)
T PLN02695 1 ESYGAYTLAE-LEREP--YWPSEKLRICITGAGGFIASHIARRLKAEGH-----YIIA----SDWKKNEH---M---SED 62 (370)
T ss_pred CCccccchhh-cCCCC--CCCCCCCEEEEECCccHHHHHHHHHHHhCCC-----EEEE----EEeccccc---c---ccc
Confidence 4677776632 22222 2455668999999999999999999998764 2432 23321110 0 000
Q ss_pred cCCCcceEE---Ee--cCcccccCCCcEEEEeCCCCCCCC---CchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 153 LFPLLREVK---IG--INPYELFEDAEWALLIGAKPRGPG---MERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 153 ~~~~~~~v~---i~--~~~~eal~dADiViitag~~rk~g---~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.....+. +. ....+.++++|+||.+++.....+ .........|......+.+.+.+. +.+ .+|.+|.
T Consensus 63 --~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk-~~V~~SS 137 (370)
T PLN02695 63 --MFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVK-RFFYASS 137 (370)
T ss_pred --cccceEEECCCCCHHHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCC-EEEEeCc
Confidence 0000111 11 112345678999999886431111 122335677888888898888875 333 4555553
No 100
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=97.11 E-value=0.0032 Score=62.64 Aligned_cols=105 Identities=20% Similarity=0.123 Sum_probs=60.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCC-C------cceEEEecCccc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFP-L------LREVKIGINPYE 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~-~------~~~v~i~~~~~e 168 (398)
|+||+|||+ |.+|..++..|...|. .|.+ + |+++ ..+....+-...... . ...+..+ .+.+
T Consensus 2 ~mkI~IiG~-G~mG~~~A~~L~~~G~-----~V~~--~--~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~ 69 (341)
T PRK08229 2 MARICVLGA-GSIGCYLGGRLAAAGA-----DVTL--I--GRAR-IGDELRAHGLTLTDYRGRDVRVPPSAIAFS-TDPA 69 (341)
T ss_pred CceEEEECC-CHHHHHHHHHHHhcCC-----cEEE--E--ecHH-HHHHHHhcCceeecCCCcceecccceeEec-cChh
Confidence 468999995 9999999999999874 3554 3 4432 222111100000000 0 0112233 3457
Q ss_pred ccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhH
Q 015897 169 LFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTN 228 (398)
Q Consensus 169 al~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~ 228 (398)
+++++|+||++...+. ..++.+.+.....++.+|+..+|..+..
T Consensus 70 ~~~~~D~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~~~ 113 (341)
T PRK08229 70 ALATADLVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVRNA 113 (341)
T ss_pred hccCCCEEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCCcH
Confidence 8899999999864221 1233344555445778888889987643
No 101
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.10 E-value=0.0042 Score=60.48 Aligned_cols=102 Identities=21% Similarity=0.254 Sum_probs=62.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccc-hhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERS-LQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~-~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
|+||+||| +|++|.+++..|...+.+.. +.+.+ + +++ +++++....+ . + .+.++.+..+.++++|
T Consensus 1 m~~I~iIG-~G~mG~ala~~L~~~g~~~~-~~V~~--~--~r~~~~~~~~l~~~----~-~---~~~~~~~~~e~~~~aD 66 (277)
T PRK06928 1 MEKIGFIG-YGSMADMIATKLLETEVATP-EEIIL--Y--SSSKNEHFNQLYDK----Y-P---TVELADNEAEIFTKCD 66 (277)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCCCc-ccEEE--E--eCCcHHHHHHHHHH----c-C---CeEEeCCHHHHHhhCC
Confidence 56899999 59999999999998874321 12433 3 333 2333222111 1 1 2334455667789999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT 227 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~ 227 (398)
+||++.. .+.+.++.+.+..+..++..||.+.|-++.
T Consensus 67 vVilavp----------------p~~~~~vl~~l~~~l~~~~~ivS~~aGi~~ 103 (277)
T PRK06928 67 HSFICVP----------------PLAVLPLLKDCAPVLTPDRHVVSIAAGVSL 103 (277)
T ss_pred EEEEecC----------------HHHHHHHHHHHHhhcCCCCEEEEECCCCCH
Confidence 9998853 234556666665543356678878776544
No 102
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.09 E-value=0.0047 Score=62.96 Aligned_cols=150 Identities=17% Similarity=0.098 Sum_probs=81.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE--ecCcccccCCC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI--GINPYELFEDA 173 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i--~~~~~eal~dA 173 (398)
|+||.|||| |+||+.++..|++++. . .|.+ .|++.+++........... .. ..+.+ .....+.+++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d-~---~V~i----AdRs~~~~~~i~~~~~~~v-~~-~~vD~~d~~al~~li~~~ 69 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD-G---EVTI----ADRSKEKCARIAELIGGKV-EA-LQVDAADVDALVALIKDF 69 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC-c---eEEE----EeCCHHHHHHHHhhccccc-ee-EEecccChHHHHHHHhcC
Confidence 679999996 9999999999999886 2 2655 4787666653432211000 00 11222 12346889999
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHH---HHCCCCCCc-eEEec--
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICL---KNAPSIPAK-NFHAL-- 247 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~---k~~~~~~~k-vig~g-- 247 (398)
|+||.++...- +. .+.+++-+ -+.-++-.+|-.+.. +.+. +.+ ++ . ++++|
T Consensus 70 d~VIn~~p~~~------------~~----~i~ka~i~---~gv~yvDts~~~~~~-~~~~~~a~~A-gi--t~v~~~G~d 126 (389)
T COG1748 70 DLVINAAPPFV------------DL----TILKACIK---TGVDYVDTSYYEEPP-WKLDEEAKKA-GI--TAVLGCGFD 126 (389)
T ss_pred CEEEEeCCchh------------hH----HHHHHHHH---hCCCEEEcccCCchh-hhhhHHHHHc-Ce--EEEcccCcC
Confidence 99999875431 22 33333333 245577777776663 3332 222 11 1 12222
Q ss_pred CchhHHHHHHHHHHHcCcCcCceeeEEEEe--ccCC
Q 015897 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWG--NHST 281 (398)
Q Consensus 248 t~lDs~Rl~~~lA~~lgv~~~~V~~v~V~G--~Hg~ 281 (398)
..++..-+.+ .++.+.-..++|+ +|+.| +||+
T Consensus 127 PGi~nv~a~~-a~~~~~~~i~si~-iy~g~~g~~~~ 160 (389)
T COG1748 127 PGITNVLAAY-AAKELFDEIESID-IYVGGLGEHGD 160 (389)
T ss_pred cchHHHHHHH-HHHHhhccccEEE-EEEecCCCCCC
Confidence 3334444444 4444443556666 34433 8883
No 103
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=97.09 E-value=0.003 Score=61.31 Aligned_cols=99 Identities=24% Similarity=0.316 Sum_probs=68.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
|+||++||+ |++|..++..|+..+.... +.|.+ .+++++++...+.++ +. . .+++..++..++|+
T Consensus 1 ~~~IgfIG~-G~Mg~Ai~~gl~~~g~~~~-~~I~v----~~~~~e~~~~l~~~~-----g~--~--~~~~~~~~~~~adv 65 (266)
T COG0345 1 MMKIGFIGA-GNMGEAILSGLLKSGALPP-EEIIV----TNRSEEKRAALAAEY-----GV--V--TTTDNQEAVEEADV 65 (266)
T ss_pred CceEEEEcc-CHHHHHHHHHHHhcCCCCc-ceEEE----eCCCHHHHHHHHHHc-----CC--c--ccCcHHHHHhhCCE
Confidence 579999995 9999999999999995442 12433 577777765333322 21 1 25566788999999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
||++.. | +.+.++.+.++.. .++..||-+.=.+.
T Consensus 66 v~LavK----P------------q~~~~vl~~l~~~-~~~~lvISiaAGv~ 99 (266)
T COG0345 66 VFLAVK----P------------QDLEEVLSKLKPL-TKDKLVISIAAGVS 99 (266)
T ss_pred EEEEeC----h------------HhHHHHHHHhhcc-cCCCEEEEEeCCCC
Confidence 999863 2 5788888888863 46767776665543
No 104
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.04 E-value=0.0058 Score=59.43 Aligned_cols=99 Identities=26% Similarity=0.228 Sum_probs=60.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccch-hhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSL-QALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~-~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
|||+||| +|++|.+++..|+..+.... +.+.+ .|++. ++++..+.++ .+.+..+..+..++||+
T Consensus 4 mkI~~IG-~G~mG~aia~~l~~~g~~~~-~~v~v----~~r~~~~~~~~l~~~~---------g~~~~~~~~e~~~~aDv 68 (279)
T PRK07679 4 QNISFLG-AGSIAEAIIGGLLHANVVKG-EQITV----SNRSNETRLQELHQKY---------GVKGTHNKKELLTDANI 68 (279)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCCCc-ceEEE----ECCCCHHHHHHHHHhc---------CceEeCCHHHHHhcCCE
Confidence 6999999 59999999999998874322 12332 35543 3444333221 12344556677899999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
||++... +.+.++...+.....++.+||.+.+-+.
T Consensus 69 Vilav~p----------------~~~~~vl~~l~~~~~~~~liIs~~aGi~ 103 (279)
T PRK07679 69 LFLAMKP----------------KDVAEALIPFKEYIHNNQLIISLLAGVS 103 (279)
T ss_pred EEEEeCH----------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 9998531 2333344455443346677777655554
No 105
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.03 E-value=0.0031 Score=62.10 Aligned_cols=108 Identities=12% Similarity=0.058 Sum_probs=61.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEecCcccccCCCcE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGINPYELFEDAEW 175 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~~~~eal~dADi 175 (398)
|||.|+||+|++|++++..|+..|. +|.. ..++.+.+. .+.+..... ..++.-.....++++++|+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~-----~V~~----l~R~~~~~~----~l~~~~v~~v~~Dl~d~~~l~~al~g~d~ 67 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY-----QVRC----LVRNLRKAS----FLKEWGAELVYGDLSLPETLPPSFKGVTA 67 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-----eEEE----EEcChHHhh----hHhhcCCEEEECCCCCHHHHHHHHCCCCE
Confidence 5899999999999999999998874 2432 244433321 111111000 0011111123577899999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
||.+++... .+..+....|..-...+.+.+++. +-+ .+|.+|
T Consensus 68 Vi~~~~~~~---~~~~~~~~~~~~~~~~l~~aa~~~-gvk-r~I~~S 109 (317)
T CHL00194 68 IIDASTSRP---SDLYNAKQIDWDGKLALIEAAKAA-KIK-RFIFFS 109 (317)
T ss_pred EEECCCCCC---CCccchhhhhHHHHHHHHHHHHHc-CCC-EEEEec
Confidence 998765321 122234455666667777777774 333 455544
No 106
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.01 E-value=0.0091 Score=58.83 Aligned_cols=70 Identities=23% Similarity=0.271 Sum_probs=45.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
.+||+||| +|.+|..++..|...+... .|.+ .|++++.++. +.++ .. ...+..+..+.+++||+
T Consensus 6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~---~V~~----~dr~~~~~~~-a~~~-----g~--~~~~~~~~~~~~~~aDv 69 (307)
T PRK07502 6 FDRVALIG-IGLIGSSLARAIRRLGLAG---EIVG----ADRSAETRAR-AREL-----GL--GDRVTTSAAEAVKGADL 69 (307)
T ss_pred CcEEEEEe-eCHHHHHHHHHHHhcCCCc---EEEE----EECCHHHHHH-HHhC-----CC--CceecCCHHHHhcCCCE
Confidence 36899999 5999999999998877421 2433 3666665442 2221 11 11123445677899999
Q ss_pred EEEeCC
Q 015897 176 ALLIGA 181 (398)
Q Consensus 176 Viitag 181 (398)
||++..
T Consensus 70 Viiavp 75 (307)
T PRK07502 70 VILCVP 75 (307)
T ss_pred EEECCC
Confidence 999864
No 107
>PLN02206 UDP-glucuronate decarboxylase
Probab=97.00 E-value=0.0055 Score=63.72 Aligned_cols=112 Identities=11% Similarity=0.124 Sum_probs=67.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ecC-cccccCC
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GIN-PYELFED 172 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~~-~~eal~d 172 (398)
+.+||.|+||+|+||++++..|+..+. .|.. + |...........+ +.. . .++.+ ..| ...++.+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~-----~V~~--l--d~~~~~~~~~~~~--~~~--~-~~~~~i~~D~~~~~l~~ 183 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGD-----SVIV--V--DNFFTGRKENVMH--HFS--N-PNFELIRHDVVEPILLE 183 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcC-----EEEE--E--eCCCccchhhhhh--hcc--C-CceEEEECCccChhhcC
Confidence 457999999999999999999999874 2432 2 3221111111111 100 0 01221 112 2345678
Q ss_pred CcEEEEeCCCCC--CCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 173 AEWALLIGAKPR--GPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 173 ADiViitag~~r--k~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+|+||.+++... ....+..+.+..|+.....+.+.+++. + .++|.++.
T Consensus 184 ~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g--~r~V~~SS 233 (442)
T PLN02206 184 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-G--ARFLLTST 233 (442)
T ss_pred CCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-C--CEEEEECC
Confidence 999999987532 112244567889999999999888875 2 46766664
No 108
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.00 E-value=0.0031 Score=62.45 Aligned_cols=118 Identities=10% Similarity=0.070 Sum_probs=69.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEecCcccccCCCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGINPYELFEDAE 174 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~~~~eal~dAD 174 (398)
.++|.|+||+|++|++++..|+..+-.. .|.+ + +++.........++......+ ..++.-.....+++++.|
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~---~V~~--~--~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD 76 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPK---KIII--Y--SRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVD 76 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCc---EEEE--E--cCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCC
Confidence 4689999999999999999999875211 2432 2 444333332222222100000 011111111245677899
Q ss_pred EEEEeCCCCCCC--CCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 175 WALLIGAKPRGP--GMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 175 iViitag~~rk~--g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
+||.++|....+ ..+..+.+..|+.-...+.+.+.+. + -+.+|.+|
T Consensus 77 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~-~~~iV~~S 124 (324)
T TIGR03589 77 YVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-G-VKRVVALS 124 (324)
T ss_pred EEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-C-CCEEEEEe
Confidence 999988764322 2244567889998888888888874 3 34566665
No 109
>PLN02778 3,5-epimerase/4-reductase
Probab=96.92 E-value=0.0096 Score=58.41 Aligned_cols=88 Identities=7% Similarity=0.023 Sum_probs=58.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
.|||.|+||+|++|++++..|+..|. ++.+ ...|. ...+....|+.+ .+.|+
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~-----~V~~--~~~~~--~~~~~v~~~l~~-------------------~~~D~ 60 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGI-----DFHY--GSGRL--ENRASLEADIDA-------------------VKPTH 60 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCC-----EEEE--ecCcc--CCHHHHHHHHHh-------------------cCCCE
Confidence 36899999999999999999998774 2432 11122 112222223221 15799
Q ss_pred EEEeCCCCCCCC-----CchhhhHHHHHHHHHHHHHHHHHh
Q 015897 176 ALLIGAKPRGPG-----MERAGLLDINGQIFAEQGKALNAV 211 (398)
Q Consensus 176 Viitag~~rk~g-----~~r~dll~~N~~i~~~i~~~i~~~ 211 (398)
||.+++....+. ....+.+..|......+++.+++.
T Consensus 61 ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~ 101 (298)
T PLN02778 61 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER 101 (298)
T ss_pred EEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999887643222 234567888998888999888885
No 110
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.90 E-value=0.0059 Score=62.99 Aligned_cols=112 Identities=15% Similarity=0.107 Sum_probs=60.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCC----------CcceEEEecC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFP----------LLREVKIGIN 165 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~----------~~~~v~i~~~ 165 (398)
++||+||| .|.+|..+|..|+..|. ++.. .|+++++++.......+...+ .......++
T Consensus 3 ~~kI~VIG-lG~~G~~~A~~La~~G~-----~V~~----~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~- 71 (415)
T PRK11064 3 FETISVIG-LGYIGLPTAAAFASRQK-----QVIG----VDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATT- 71 (415)
T ss_pred ccEEEEEC-cchhhHHHHHHHHhCCC-----EEEE----EeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeec-
Confidence 57999999 59999999999999874 2433 367777766422110000000 001222322
Q ss_pred cccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC-CCchh
Q 015897 166 PYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG-NPCNT 227 (398)
Q Consensus 166 ~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt-NP~d~ 227 (398)
++++||+||++...|..+.. .. +...+.+..+.|.++..++.+||+-| -|...
T Consensus 72 ---~~~~aDvvii~vptp~~~~~-~~-----dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgt 125 (415)
T PRK11064 72 ---TPEPADAFLIAVPTPFKGDH-EP-----DLTYVEAAAKSIAPVLKKGDLVILESTSPVGA 125 (415)
T ss_pred ---ccccCCEEEEEcCCCCCCCC-Cc-----ChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCH
Confidence 24589999999877643211 11 12233344444545434555554443 35443
No 111
>PLN02427 UDP-apiose/xylose synthase
Probab=96.90 E-value=0.0023 Score=64.77 Aligned_cols=114 Identities=17% Similarity=0.096 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcC-CCcceEEEec-------Cc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLF-PLLREVKIGI-------NP 166 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~-~~~~~v~i~~-------~~ 166 (398)
++|||.|+||+|+||++++..|+..+-. .|.. + |++.++.. .+..... ....++++.. ..
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~----~V~~--l--~r~~~~~~----~l~~~~~~~~~~~~~~~~~Dl~d~~~l 80 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH----KVLA--L--DVYNDKIK----HLLEPDTVPWSGRIQFHRINIKHDSRL 80 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC----EEEE--E--ecCchhhh----hhhccccccCCCCeEEEEcCCCChHHH
Confidence 3579999999999999999999987411 2332 2 44433322 1111000 0001122111 12
Q ss_pred ccccCCCcEEEEeCCCCCCC--CCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 YELFEDAEWALLIGAKPRGP--GMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 ~eal~dADiViitag~~rk~--g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.++++++|+||.+++..... ..+..+.+..|+.-...+.+..++. . ..+|.+|.
T Consensus 81 ~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~--~r~v~~SS 136 (386)
T PLN02427 81 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N--KRLIHFST 136 (386)
T ss_pred HHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C--CEEEEEee
Confidence 45677899999998753211 1122345566766666667766653 2 46666664
No 112
>PLN02650 dihydroflavonol-4-reductase
Probab=96.88 E-value=0.0058 Score=60.88 Aligned_cols=115 Identities=11% Similarity=0.097 Sum_probs=66.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEE-----Ee--cCccc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVK-----IG--INPYE 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~-----i~--~~~~e 168 (398)
.++|.|+||+|+||++++..|+..|. .|.+ + +++.+.+.... ++.... .....+. +. ....+
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G~-----~V~~--~--~r~~~~~~~~~-~~~~~~-~~~~~~~~v~~Dl~d~~~~~~ 73 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERGY-----TVRA--T--VRDPANVKKVK-HLLDLP-GATTRLTLWKADLAVEGSFDD 73 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCCC-----EEEE--E--EcCcchhHHHH-HHHhcc-CCCCceEEEEecCCChhhHHH
Confidence 45899999999999999999998864 2433 1 23333332221 221100 0000111 11 11235
Q ss_pred ccCCCcEEEEeCCCCCCCCCc-hhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 169 LFEDAEWALLIGAKPRGPGME-RAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 169 al~dADiViitag~~rk~g~~-r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
.++++|+||.+++.......+ ..+.+..|+.-...+.+.+.+. ..-.++|.+|
T Consensus 74 ~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~r~v~~S 127 (351)
T PLN02650 74 AIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKA-KTVRRIVFTS 127 (351)
T ss_pred HHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhc-CCceEEEEec
Confidence 677899999988643211112 2356778888888888888774 2224566655
No 113
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=96.88 E-value=0.0022 Score=62.61 Aligned_cols=115 Identities=16% Similarity=0.148 Sum_probs=71.4
Q ss_pred EEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcC--CCcceEEEecCcccccCCCcEEEE
Q 015897 101 VSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLF--PLLREVKIGINPYELFEDAEWALL 178 (398)
Q Consensus 101 IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~--~~~~~v~i~~~~~eal~dADiVii 178 (398)
|+||+|++|++++..|+..+-.. .|. .+|.......+. ++.+... .+..+++-..+..++++++|+||.
T Consensus 2 VTGgsGflG~~iv~~Ll~~g~~~---~Vr--~~d~~~~~~~~~----~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H 72 (280)
T PF01073_consen 2 VTGGSGFLGSHIVRQLLERGYIY---EVR--VLDRSPPPKFLK----DLQKSGVKEYIQGDITDPESLEEALEGVDVVFH 72 (280)
T ss_pred EEcCCcHHHHHHHHHHHHCCCce---EEE--Ecccccccccch----hhhcccceeEEEeccccHHHHHHHhcCCceEEE
Confidence 89999999999999999988421 233 333322221111 1121110 011233223345689999999999
Q ss_pred eCCCCCCCC-CchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh
Q 015897 179 IGAKPRGPG-MERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT 227 (398)
Q Consensus 179 tag~~rk~g-~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~ 227 (398)
++..-.-.+ ..+..+...|+.=.+.+.+...+. +.+-+|+|.-+++
T Consensus 73 ~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~---~VkrlVytSS~~v 119 (280)
T PF01073_consen 73 TAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA---GVKRLVYTSSISV 119 (280)
T ss_pred eCccccccCcccHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEcCcce
Confidence 987533333 356678889999999999888874 5555556655554
No 114
>PLN00198 anthocyanidin reductase; Provisional
Probab=96.87 E-value=0.0061 Score=60.34 Aligned_cols=114 Identities=14% Similarity=0.117 Sum_probs=65.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ec------Cccc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GI------NPYE 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~------~~~e 168 (398)
++||.|+||+|++|++++..|+..|. .|.+ +..|. +..... .++.... .. .++.+ .. ...+
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~-----~V~~--~~r~~--~~~~~~-~~~~~~~-~~-~~~~~~~~Dl~d~~~~~~ 76 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGY-----AVNT--TVRDP--ENQKKI-AHLRALQ-EL-GDLKIFGADLTDEESFEA 76 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCC-----EEEE--EECCC--CCHHHH-HHHHhcC-CC-CceEEEEcCCCChHHHHH
Confidence 56899999999999999999998874 2432 11222 221111 1111100 00 11111 11 1235
Q ss_pred ccCCCcEEEEeCCCCCCCCCc-hhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 169 LFEDAEWALLIGAKPRGPGME-RAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 169 al~dADiViitag~~rk~g~~-r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
.++++|+||.+++.......+ ..++...|+.-...+.+.+.+. ..-..+|.+|
T Consensus 77 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~-~~~~~~v~~S 130 (338)
T PLN00198 77 PIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKA-KSVKRVILTS 130 (338)
T ss_pred HHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEee
Confidence 578899999988743211112 2345678999888898888775 2223555554
No 115
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.82 E-value=0.0025 Score=57.05 Aligned_cols=93 Identities=16% Similarity=0.120 Sum_probs=60.1
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe----cCcccccCCCc
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG----INPYELFEDAE 174 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~----~~~~eal~dAD 174 (398)
|.|+||+|++|+.++..|+..+. +|.. +-+++++++. . +....+... ....++++++|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-----~V~~----~~R~~~~~~~--------~-~~~~~~~~d~~d~~~~~~al~~~d 62 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-----EVTA----LVRSPSKAED--------S-PGVEIIQGDLFDPDSVKAALKGAD 62 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-----EEEE----EESSGGGHHH--------C-TTEEEEESCTTCHHHHHHHHTTSS
T ss_pred eEEECCCChHHHHHHHHHHHCCC-----EEEE----EecCchhccc--------c-cccccceeeehhhhhhhhhhhhcc
Confidence 78999999999999999999983 3543 1356665553 1 111111111 12357889999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
.||.+.|.+.+ ....++.+.+.+++. + -..++.+|
T Consensus 63 ~vi~~~~~~~~-----------~~~~~~~~~~a~~~~-~-~~~~v~~s 97 (183)
T PF13460_consen 63 AVIHAAGPPPK-----------DVDAAKNIIEAAKKA-G-VKRVVYLS 97 (183)
T ss_dssp EEEECCHSTTT-----------HHHHHHHHHHHHHHT-T-SSEEEEEE
T ss_pred hhhhhhhhhcc-----------ccccccccccccccc-c-cccceeee
Confidence 99999876543 167778888888874 3 23555554
No 116
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.77 E-value=0.0059 Score=60.29 Aligned_cols=80 Identities=14% Similarity=0.104 Sum_probs=54.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
.+||+||| +|.+|.+++..|...|. +|.+ + +++.. .+..+++++||+
T Consensus 4 ~m~I~iiG-~G~~G~~lA~~l~~~G~-----~V~~--~--~r~~~-----------------------~~~~~~~~~adv 50 (308)
T PRK14619 4 PKTIAILG-AGAWGSTLAGLASANGH-----RVRV--W--SRRSG-----------------------LSLAAVLADADV 50 (308)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCC-----EEEE--E--eCCCC-----------------------CCHHHHHhcCCE
Confidence 46899999 59999999999998875 3543 4 44321 234566789999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHh-cCCCeEEEEECCC
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAV-ASRNVKVIVVGNP 224 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~-a~p~a~vIvvtNP 224 (398)
||++.. ...++++.+.+..+ ..++.+++..++.
T Consensus 51 vi~~vp----------------~~~~~~v~~~l~~~~~~~~~ivi~~s~g 84 (308)
T PRK14619 51 IVSAVS----------------MKGVRPVAEQVQALNLPPETIIVTATKG 84 (308)
T ss_pred EEEECC----------------hHHHHHHHHHHHHhcCCCCcEEEEeCCc
Confidence 998842 13455555666542 2467888888873
No 117
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=96.75 E-value=0.0094 Score=58.22 Aligned_cols=115 Identities=16% Similarity=0.025 Sum_probs=64.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhc--CCCc----ceEEEecCcccc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSL--FPLL----REVKIGINPYEL 169 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~--~~~~----~~v~i~~~~~ea 169 (398)
.+||.|+||+|+||++++..|+..|. .|.. + +++.+... ....+.... .+.. .++.-.....++
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~-----~V~~--~--~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 73 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGY-----TVKA--T--VRDPNDPK-KTEHLLALDGAKERLHLFKANLLEEGSFDSV 73 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCC-----EEEE--E--EcCCCchh-hHHHHHhccCCCCceEEEeccccCcchHHHH
Confidence 36899999999999999999998875 2432 1 22222211 111111100 0000 111111123456
Q ss_pred cCCCcEEEEeCCCCCCC-CCchhhhHHHHHHHHHHHHHHHHHhcCCC-eEEEEEC
Q 015897 170 FEDAEWALLIGAKPRGP-GMERAGLLDINGQIFAEQGKALNAVASRN-VKVIVVG 222 (398)
Q Consensus 170 l~dADiViitag~~rk~-g~~r~dll~~N~~i~~~i~~~i~~~a~p~-a~vIvvt 222 (398)
++++|+||.+++..... .....+.+..|+.-...+.+.+.+. .+ ..+|.+|
T Consensus 74 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~v~~S 126 (322)
T PLN02662 74 VDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV--PSVKRVVVTS 126 (322)
T ss_pred HcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC--CCCCEEEEcc
Confidence 78999999988753211 1122356778888888888887764 22 2455544
No 118
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.71 E-value=0.011 Score=58.09 Aligned_cols=116 Identities=15% Similarity=0.009 Sum_probs=65.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEE-----Ee--cCcc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVK-----IG--INPY 167 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~-----i~--~~~~ 167 (398)
+.++|.|+||+|+||++++..|+..|. .|.+ . .++.+.++.. ..+.... ....++. ++ .+..
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~-----~V~~--~--~r~~~~~~~~-~~~~~~~-~~~~~~~~~~~D~~d~~~~~ 72 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGY-----TINA--T--VRDPKDRKKT-DHLLALD-GAKERLKLFKADLLDEGSFE 72 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-----EEEE--E--EcCCcchhhH-HHHHhcc-CCCCceEEEeCCCCCchHHH
Confidence 346899999999999999999998875 2433 1 2222222211 1111100 0001111 11 1123
Q ss_pred cccCCCcEEEEeCCCCCCC-CC-chhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 168 ELFEDAEWALLIGAKPRGP-GM-ERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 168 eal~dADiViitag~~rk~-g~-~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
+.+++.|+||.+++..... .. .-...+..|..-...+.+.+.+. ...+.||++|
T Consensus 73 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~-~~~~~iv~~S 128 (325)
T PLN02989 73 LAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKV-SSVKRVILTS 128 (325)
T ss_pred HHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHc-CCceEEEEec
Confidence 4567899999998754211 11 22355778888888888887774 2234566555
No 119
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=96.70 E-value=0.0057 Score=61.09 Aligned_cols=121 Identities=13% Similarity=0.014 Sum_probs=67.9
Q ss_pred hhccCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCC-CcceEEEec-C---
Q 015897 91 KSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFP-LLREVKIGI-N--- 165 (398)
Q Consensus 91 ~~~~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~-~~~~v~i~~-~--- 165 (398)
+...+++||.|+||+|++|++++..|+..+. .|.. + |+..........++...... ...++.+.. |
T Consensus 10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~-----~V~~--~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (348)
T PRK15181 10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQ-----TVIG--L--DNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK 80 (348)
T ss_pred cccccCCEEEEECCccHHHHHHHHHHHHCCC-----EEEE--E--eCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence 3333457999999999999999999998864 2322 2 33211111011111100000 001121111 1
Q ss_pred ---cccccCCCcEEEEeCCCCCCC--CCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 166 ---PYELFEDAEWALLIGAKPRGP--GMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 166 ---~~eal~dADiViitag~~rk~--g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
..+.++++|+||.+|+....+ ..+..+....|+.-...+.+.+++. +-. .+|.++
T Consensus 81 ~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~-~~v~~S 140 (348)
T PRK15181 81 FTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVS-SFTYAA 140 (348)
T ss_pred HHHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCC-eEEEee
Confidence 134478899999998754322 2334556788888888988888875 222 455554
No 120
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.70 E-value=0.017 Score=56.49 Aligned_cols=108 Identities=17% Similarity=0.226 Sum_probs=63.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHH-HHHHHHhhhcCCCcceEEEecC-cccccCCC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALE-GVAMELEDSLFPLLREVKIGIN-PYELFEDA 173 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~-g~a~DL~d~~~~~~~~v~i~~~-~~eal~dA 173 (398)
++||+|+| .|.+|..++..|...+.. +.+ ++.|.+...++ +...++.|. .+.+ ..++.++|
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~~~g~~-----v~i--~g~d~~~~~~~~a~~lgv~d~---------~~~~~~~~~~~~a 65 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALKEAGLV-----VRI--IGRDRSAATLKAALELGVIDE---------LTVAGLAEAAAEA 65 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHHHcCCe-----EEE--EeecCcHHHHHHHhhcCcccc---------cccchhhhhcccC
Confidence 57999999 599999999999998873 332 45666554433 111222211 1122 37888999
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHC
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNA 236 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~ 236 (398)
|+||++.- +....++.+++.....++++|.=+|--=..+...+.++.
T Consensus 66 D~VivavP----------------i~~~~~~l~~l~~~l~~g~iv~Dv~S~K~~v~~a~~~~~ 112 (279)
T COG0287 66 DLVIVAVP----------------IEATEEVLKELAPHLKKGAIVTDVGSVKSSVVEAMEKYL 112 (279)
T ss_pred CEEEEecc----------------HHHHHHHHHHhcccCCCCCEEEecccccHHHHHHHHHhc
Confidence 99999853 233334444444322567777666544333344444443
No 121
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=96.70 E-value=0.0038 Score=62.15 Aligned_cols=111 Identities=13% Similarity=0.093 Sum_probs=62.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhc-CcCCCCCceEEEecccccchhhHHHHHHHHhhhc-CCCcceEEEecC---ccccc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAG-EVLGPDQPIALKLLGSERSLQALEGVAMELEDSL-FPLLREVKIGIN---PYELF 170 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~-~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~-~~~~~~v~i~~~---~~eal 170 (398)
||||.|+||+|++|++++..|+.. +. .|.. +|++.+... ++.... ..+ ....+..+ ..+.+
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~-----~V~~----~~r~~~~~~----~~~~~~~~~~-~~~Dl~~~~~~~~~~~ 66 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDW-----EVYG----MDMQTDRLG----DLVNHPRMHF-FEGDITINKEWIEYHV 66 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCC-----eEEE----EeCcHHHHH----HhccCCCeEE-EeCCCCCCHHHHHHHH
Confidence 568999999999999999999875 32 2332 244433221 111100 000 00111111 12456
Q ss_pred CCCcEEEEeCCCCC--CCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 171 EDAEWALLIGAKPR--GPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 171 ~dADiViitag~~r--k~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+++|+||.+++... ....+.......|+.-...+.+.+.+. . ..+|.+|-
T Consensus 67 ~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~--~~~v~~SS 118 (347)
T PRK11908 67 KKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G--KHLVFPST 118 (347)
T ss_pred cCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C--CeEEEEec
Confidence 89999999876532 122233445666777777888877774 2 46666654
No 122
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.018 Score=53.96 Aligned_cols=114 Identities=17% Similarity=0.093 Sum_probs=63.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-c--Ccccc---
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-I--NPYEL--- 169 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~--~~~ea--- 169 (398)
|++|.|+||+|.+|.+++..|+..|. .|.+ .+++++.++....++.... . .++.+. . .+++.
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~-----~Vi~----~~r~~~~~~~~~~~~~~~~-~--~~~~~~~~Dl~~~~~~~~ 68 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGA-----RLYL----AARDVERLERLADDLRARG-A--VAVSTHELDILDTASHAA 68 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCC-----EEEE----EeCCHHHHHHHHHHHHHhc-C--CeEEEEecCCCChHHHHH
Confidence 46899999999999999999998874 2443 3566666666666654321 1 112111 1 11211
Q ss_pred -----cCCCcEEEEeCCCCC-C--CCCchh---hhHHHHHHH----HHHHHHHHHHhcCCCeEEEEECC
Q 015897 170 -----FEDAEWALLIGAKPR-G--PGMERA---GLLDINGQI----FAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 170 -----l~dADiViitag~~r-k--~g~~r~---dll~~N~~i----~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+..|++|..+|... . ...+.. +.+..|..- .+.+.+.+.+. ..+.++++|-
T Consensus 69 ~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~~sS 135 (243)
T PRK07102 69 FLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEAR--GSGTIVGISS 135 (243)
T ss_pred HHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCCEEEEEec
Confidence 123599998876532 1 122322 334555443 34444444442 3566666663
No 123
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=96.64 E-value=0.022 Score=56.15 Aligned_cols=116 Identities=15% Similarity=0.058 Sum_probs=63.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc--ceEEEec--CcccccC-
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL--REVKIGI--NPYELFE- 171 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~--~~v~i~~--~~~eal~- 171 (398)
|||.|+||+|++|++++..|+..+. .|.+ + ++...........+.+..-... ....++. ...++++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-----~V~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 71 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH-----DVVI--L--DNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD 71 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC-----eEEE--E--ecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc
Confidence 5899999999999999999998764 2433 2 2211111111111221110000 0111111 0122343
Q ss_pred -CCcEEEEeCCCCCCC--CCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 172 -DAEWALLIGAKPRGP--GMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 172 -dADiViitag~~rk~--g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
++|+||.+++..... .....+.+..|+.....+.+.+.+. + -..+|.+|.
T Consensus 72 ~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~v~~Ss 124 (338)
T PRK10675 72 HAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-N-VKNLIFSSS 124 (338)
T ss_pred CCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-C-CCEEEEecc
Confidence 589999988754211 1234567888999899999888874 2 234555553
No 124
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.64 E-value=0.012 Score=56.45 Aligned_cols=70 Identities=20% Similarity=0.284 Sum_probs=46.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
|||+||| +|++|.+++..|...+.-. +.+.+ .+++.++++..+..+ + .+.+..+..+.++++|+|
T Consensus 1 m~IgiIG-~G~mG~aia~~L~~~g~~~--~~i~v----~~r~~~~~~~l~~~~-----~---~~~~~~~~~~~~~~aDvV 65 (258)
T PRK06476 1 MKIGFIG-TGAITEAMVTGLLTSPADV--SEIIV----SPRNAQIAARLAERF-----P---KVRIAKDNQAVVDRSDVV 65 (258)
T ss_pred CeEEEEC-cCHHHHHHHHHHHhCCCCh--heEEE----ECCCHHHHHHHHHHc-----C---CceEeCCHHHHHHhCCEE
Confidence 4899999 5999999999999876411 12332 366666655443322 1 133445566678899999
Q ss_pred EEeCC
Q 015897 177 LLIGA 181 (398)
Q Consensus 177 iitag 181 (398)
|++..
T Consensus 66 ilav~ 70 (258)
T PRK06476 66 FLAVR 70 (258)
T ss_pred EEEeC
Confidence 99854
No 125
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.62 E-value=0.0097 Score=58.32 Aligned_cols=73 Identities=15% Similarity=0.135 Sum_probs=52.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
..||.|+|| |.+|.++++.|+..+.- .|.+ .|++.+++++.+.++.+.. +. ..+....+.++.++++|+
T Consensus 127 ~k~vlIlGa-GGaaraia~aL~~~G~~----~I~I----~nR~~~ka~~la~~l~~~~-~~-~~~~~~~~~~~~~~~aDi 195 (284)
T PRK12549 127 LERVVQLGA-GGAGAAVAHALLTLGVE----RLTI----FDVDPARAAALADELNARF-PA-ARATAGSDLAAALAAADG 195 (284)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCC----EEEE----ECCCHHHHHHHHHHHHhhC-CC-eEEEeccchHhhhCCCCE
Confidence 468999995 99999999999988752 2554 3788899999988886543 21 122111223567899999
Q ss_pred EEEe
Q 015897 176 ALLI 179 (398)
Q Consensus 176 Viit 179 (398)
||.+
T Consensus 196 VIna 199 (284)
T PRK12549 196 LVHA 199 (284)
T ss_pred EEEC
Confidence 9987
No 126
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.61 E-value=0.0081 Score=59.89 Aligned_cols=117 Identities=13% Similarity=0.001 Sum_probs=65.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEec--CcccccC-
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGI--NPYELFE- 171 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~--~~~eal~- 171 (398)
.++|.|+||+|++|++++..|+..|. .|.. ++++..........+.... .. .....++. +..+.++
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~-----~V~~----~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~ 73 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGA-----EVYG----YSLDPPTSPNLFELLNLAK-KIEDHFGDIRDAAKLRKAIAE 73 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCC-----EEEE----EeCCCccchhHHHHHhhcC-CceEEEccCCCHHHHHHHHhh
Confidence 46899999999999999999998874 2432 2444332221111111100 00 00011110 1123344
Q ss_pred -CCcEEEEeCCCCCC--CCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 172 -DAEWALLIGAKPRG--PGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 172 -dADiViitag~~rk--~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+.|+||.+++.+.. ...+-...+..|+.-...+.+.+.+. +....+|++|.
T Consensus 74 ~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~iv~~SS 127 (349)
T TIGR02622 74 FKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAI-GSVKAVVNVTS 127 (349)
T ss_pred cCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhc-CCCCEEEEEec
Confidence 35999998875421 11233456778888888888888764 32346666664
No 127
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.61 E-value=0.0088 Score=60.10 Aligned_cols=97 Identities=25% Similarity=0.340 Sum_probs=64.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhc-CcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAG-EVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~-~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
.++|.|+||+|++|+.++..|+.. +. . .+.+ ++++++++...+.++.+.. + .+..+++.++|
T Consensus 155 ~k~VLVtGAtG~IGs~lar~L~~~~gv-~---~lil----v~R~~~rl~~La~el~~~~--------i-~~l~~~l~~aD 217 (340)
T PRK14982 155 KATVAVVGATGDIGSAVCRWLDAKTGV-A---ELLL----VARQQERLQELQAELGGGK--------I-LSLEEALPEAD 217 (340)
T ss_pred CCEEEEEccChHHHHHHHHHHHhhCCC-C---EEEE----EcCCHHHHHHHHHHhcccc--------H-HhHHHHHccCC
Confidence 469999999899999999999854 33 1 1433 3677777776666654211 1 13457899999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhH
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTN 228 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~ 228 (398)
+|+.+++.+...-.+..++ .+..++|-++-|=|+-
T Consensus 218 iVv~~ts~~~~~~I~~~~l-------------------~~~~~viDiAvPRDVd 252 (340)
T PRK14982 218 IVVWVASMPKGVEIDPETL-------------------KKPCLMIDGGYPKNLD 252 (340)
T ss_pred EEEECCcCCcCCcCCHHHh-------------------CCCeEEEEecCCCCCC
Confidence 9999887764211222111 2568888899997764
No 128
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=96.60 E-value=0.021 Score=59.22 Aligned_cols=74 Identities=14% Similarity=0.181 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC----------cceEEEec
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL----------LREVKIGI 164 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~----------~~~v~i~~ 164 (398)
++|||+||| .|.||..++..|+. + + ++.. .|+++++++... ....++ ......+
T Consensus 5 ~~mkI~vIG-lGyvGlpmA~~la~-~-~----~V~g----~D~~~~~ve~l~----~G~~~~~e~~~~~l~~~g~l~~t- 68 (425)
T PRK15182 5 DEVKIAIIG-LGYVGLPLAVEFGK-S-R----QVVG----FDVNKKRILELK----NGVDVNLETTEEELREARYLKFT- 68 (425)
T ss_pred CCCeEEEEC-cCcchHHHHHHHhc-C-C----EEEE----EeCCHHHHHHHH----CcCCCCCCCCHHHHHhhCCeeEE-
Confidence 358999999 79999999998776 3 2 2432 367767665433 211111 0123333
Q ss_pred CcccccCCCcEEEEeCCCCC
Q 015897 165 NPYELFEDAEWALLIGAKPR 184 (398)
Q Consensus 165 ~~~eal~dADiViitag~~r 184 (398)
.+.+++++||++|++.+.|.
T Consensus 69 ~~~~~~~~advvii~Vptp~ 88 (425)
T PRK15182 69 SEIEKIKECNFYIITVPTPI 88 (425)
T ss_pred eCHHHHcCCCEEEEEcCCCC
Confidence 45678999999999988774
No 129
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.0086 Score=56.70 Aligned_cols=117 Identities=18% Similarity=0.099 Sum_probs=64.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--Ccccc----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--NPYEL---- 169 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~~~ea---- 169 (398)
|+++.|+||+|.+|..++..|+..|. .+.+ ++++.+.++....++.... .....+.++. +..+.
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~ 70 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGW-----RVGA----YDINEAGLAALAAELGAGN-AWTGALDVTDRAAWDAALADF 70 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC-----eEEE----EeCCHHHHHHHHHHhcCCc-eEEEEecCCCHHHHHHHHHHH
Confidence 45799999999999999999998874 2443 3566666655544443111 0001112211 01111
Q ss_pred ----cCCCcEEEEeCCCCCCCCC---c---hhhhHHHHHHHH----HHHHHHHHHhcCCCeEEEEECCC
Q 015897 170 ----FEDAEWALLIGAKPRGPGM---E---RAGLLDINGQIF----AEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 170 ----l~dADiViitag~~rk~g~---~---r~dll~~N~~i~----~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
....|+||.++|....... + -...+..|..-. +.+.+.+++ .+.+.+++++-.
T Consensus 71 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~isS~ 137 (260)
T PRK08267 71 AAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKA--TPGARVINTSSA 137 (260)
T ss_pred HHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCCEEEEeCch
Confidence 3456999999886532211 1 123455665533 333444444 355677776643
No 130
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=96.54 E-value=0.015 Score=55.45 Aligned_cols=114 Identities=17% Similarity=0.160 Sum_probs=79.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhh-hcCCCcceEEEec---------Cc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELED-SLFPLLREVKIGI---------NP 166 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d-~~~~~~~~v~i~~---------~~ 166 (398)
+-+.|.||++.+|...+..|+..|. ++.| ..+++++|+..+.++.+ ...+. .+.++. ..
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~-----~vvl----~aRR~drL~~la~~~~~~~~~~~--~~DVtD~~~~~~~i~~~ 75 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGA-----KVVL----AARREERLEALADEIGAGAALAL--ALDVTDRAAVEAAIEAL 75 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCC-----eEEE----EeccHHHHHHHHHhhccCceEEE--eeccCCHHHHHHHHHHH
Confidence 4578899999999999999999986 3544 48999999999999985 11111 222221 13
Q ss_pred ccccCCCcEEEEeCCCCCCCCC---c---hhhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 YELFEDAEWALLIGAKPRGPGM---E---RAGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 ~eal~dADiViitag~~rk~g~---~---r~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+.+.|++|..+|.-+..-. + =..+++.|++ .++.+.+.+.+. ..|.|||++-
T Consensus 76 ~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r--~~G~IiN~~S 140 (246)
T COG4221 76 PEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER--KSGHIINLGS 140 (246)
T ss_pred HHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc--CCceEEEecc
Confidence 4678899999999887543111 1 2345777865 566677777774 5778988874
No 131
>PLN02214 cinnamoyl-CoA reductase
Probab=96.52 E-value=0.019 Score=57.33 Aligned_cols=113 Identities=12% Similarity=0.033 Sum_probs=65.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHH-HHHHHHhhhcCCC---cceEEEecCcccccC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALE-GVAMELEDSLFPL---LREVKIGINPYELFE 171 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~-g~a~DL~d~~~~~---~~~v~i~~~~~eal~ 171 (398)
+++|.|+||+|++|++++..|+..|. .|.. + +++.+... ....++....... ..++.-.....++++
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~-----~V~~--~--~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 80 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGY-----TVKG--T--VRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID 80 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC-----EEEE--E--eCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh
Confidence 56899999999999999999998874 2433 1 33323221 1111221110000 001111112246678
Q ss_pred CCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 172 DAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 172 dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
++|+||.+++... .+..+.+..|+.-...+.+.+.+. +.+ .+|.+|
T Consensus 81 ~~d~Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~-~v~-r~V~~S 126 (342)
T PLN02214 81 GCDGVFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEA-KVK-RVVITS 126 (342)
T ss_pred cCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhc-CCC-EEEEec
Confidence 9999999987532 234556778888888888888774 332 455544
No 132
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=96.51 E-value=0.008 Score=58.67 Aligned_cols=63 Identities=10% Similarity=0.134 Sum_probs=44.0
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEEE
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWAL 177 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiVi 177 (398)
||+||| .|.+|..++..|+..|. +|.+ + |++.++++.. .+.. .....+..+++++||+||
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G~-----~V~~--~--dr~~~~~~~~----~~~g------~~~~~~~~~~~~~aDivi 60 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAGY-----QLHV--T--TIGPEVADEL----LAAG------AVTAETARQVTEQADVIF 60 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCCC-----eEEE--E--cCCHHHHHHH----HHCC------CcccCCHHHHHhcCCEEE
Confidence 699999 59999999999998774 3543 3 6776665432 2211 112345678899999999
Q ss_pred EeC
Q 015897 178 LIG 180 (398)
Q Consensus 178 ita 180 (398)
++.
T Consensus 61 ~~v 63 (291)
T TIGR01505 61 TMV 63 (291)
T ss_pred Eec
Confidence 985
No 133
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.51 E-value=0.015 Score=56.80 Aligned_cols=120 Identities=18% Similarity=0.179 Sum_probs=82.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-c---C------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-I---N------ 165 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~---~------ 165 (398)
.+.|.|+||+..||.++|+.|+..|. .+++ .-+..++++-++.++.....+. ++.+. . +
T Consensus 12 ~kvVvITGASsGIG~~lA~~la~~G~-----~l~l----var~~rrl~~v~~~l~~~~~~~--~v~~~~~Dvs~~~~~~~ 80 (282)
T KOG1205|consen 12 GKVVLITGASSGIGEALAYELAKRGA-----KLVL----VARRARRLERVAEELRKLGSLE--KVLVLQLDVSDEESVKK 80 (282)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC-----ceEE----eehhhhhHHHHHHHHHHhCCcC--ccEEEeCccCCHHHHHH
Confidence 45889999999999999999999986 2333 2466778887778887765222 12211 1 1
Q ss_pred ----cccccCCCcEEEEeCCCCCCCCC-c------hhhhHHHH----HHHHHHHHHHHHHhcCCCeEEEEECCCchhHH
Q 015897 166 ----PYELFEDAEWALLIGAKPRGPGM-E------RAGLLDIN----GQIFAEQGKALNAVASRNVKVIVVGNPCNTNA 229 (398)
Q Consensus 166 ----~~eal~dADiViitag~~rk~g~-~------r~dll~~N----~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t 229 (398)
...-+.+.|+.|..||..+ .+. + ....++.| +-+-+...+.+++. + +|.|++++....-++
T Consensus 81 ~~~~~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r-~-~GhIVvisSiaG~~~ 156 (282)
T KOG1205|consen 81 FVEWAIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKR-N-DGHIVVISSIAGKMP 156 (282)
T ss_pred HHHHHHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhc-C-CCeEEEEeccccccC
Confidence 1246789999999999887 332 1 22345544 66788888999986 3 799999887765443
No 134
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=96.49 E-value=0.0049 Score=59.01 Aligned_cols=96 Identities=18% Similarity=0.218 Sum_probs=61.2
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEEEE
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALL 178 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiVii 178 (398)
|.|+||+|++|++++..|+..+. .|.. + +++.+....... ... ... ......++++++|+||.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~-----~V~~--~--~r~~~~~~~~~~---~~~----~~~-~~~~~~~~~~~~D~Vvh 63 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH-----EVTI--L--TRSPPAGANTKW---EGY----KPW-APLAESEALEGADAVIN 63 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC-----EEEE--E--eCCCCCCCcccc---eee----ecc-cccchhhhcCCCCEEEE
Confidence 57999999999999999998764 2432 2 444333211100 000 001 11345678899999999
Q ss_pred eCCCCCCCC----CchhhhHHHHHHHHHHHHHHHHHh
Q 015897 179 IGAKPRGPG----MERAGLLDINGQIFAEQGKALNAV 211 (398)
Q Consensus 179 tag~~rk~g----~~r~dll~~N~~i~~~i~~~i~~~ 211 (398)
+++.+...+ .....+...|+.....+.+.+.+.
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~ 100 (292)
T TIGR01777 64 LAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA 100 (292)
T ss_pred CCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc
Confidence 988754322 123456677888899999999885
No 135
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=96.46 E-value=0.035 Score=53.50 Aligned_cols=91 Identities=12% Similarity=0.140 Sum_probs=57.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
+||+||| +|++|++++..|...+.+.. +.+.. .|++++++ .+....++.+.++++|+|
T Consensus 4 mkI~iIG-~G~mG~ai~~~l~~~~~~~~-~~i~~----~~~~~~~~----------------~~~~~~~~~~~~~~~D~V 61 (260)
T PTZ00431 4 IRVGFIG-LGKMGSALAYGIENSNIIGK-ENIYY----HTPSKKNT----------------PFVYLQSNEELAKTCDII 61 (260)
T ss_pred CEEEEEC-ccHHHHHHHHHHHhCCCCCc-ceEEE----ECCChhcC----------------CeEEeCChHHHHHhCCEE
Confidence 6899999 59999999999998875442 12432 35544321 012334566778899999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
|++.- .+.+.++.+.+..+- ++..||.+.+-+.
T Consensus 62 ilavk----------------p~~~~~vl~~i~~~l-~~~~iIS~~aGi~ 94 (260)
T PTZ00431 62 VLAVK----------------PDLAGKVLLEIKPYL-GSKLLISICGGLN 94 (260)
T ss_pred EEEeC----------------HHHHHHHHHHHHhhc-cCCEEEEEeCCcc
Confidence 98842 245566666666542 2345666666655
No 136
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.45 E-value=0.0094 Score=51.73 Aligned_cols=76 Identities=22% Similarity=0.125 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
+..++.|+|| |.+|..+++.|...+.- .|.+ .+++.++++..+..+.... ....-..+..+.+.++|
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~----~i~i----~nRt~~ra~~l~~~~~~~~----~~~~~~~~~~~~~~~~D 77 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAK----EITI----VNRTPERAEALAEEFGGVN----IEAIPLEDLEEALQEAD 77 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSS----EEEE----EESSHHHHHHHHHHHTGCS----EEEEEGGGHCHHHHTES
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCC----EEEE----EECCHHHHHHHHHHcCccc----cceeeHHHHHHHHhhCC
Confidence 3579999995 99999999999998762 2554 4788888887777762111 12222334556788999
Q ss_pred EEEEeCCCC
Q 015897 175 WALLIGAKP 183 (398)
Q Consensus 175 iViitag~~ 183 (398)
+||.+.+.+
T Consensus 78 ivI~aT~~~ 86 (135)
T PF01488_consen 78 IVINATPSG 86 (135)
T ss_dssp EEEE-SSTT
T ss_pred eEEEecCCC
Confidence 999986554
No 137
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.45 E-value=0.039 Score=55.04 Aligned_cols=113 Identities=12% Similarity=0.022 Sum_probs=61.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-cC------ccc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-IN------PYE 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~~------~~e 168 (398)
.+||.|+||+|+||++++..|+..|. .|.+ .+++.+.......++.. ..++.+. .| ..+
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~G~-----~V~~----~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~ 75 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQRGY-----TVHA----TLRDPAKSLHLLSKWKE-----GDRLRLFRADLQEEGSFDE 75 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-----EEEE----EeCChHHHHHHHHhhcc-----CCeEEEEECCCCCHHHHHH
Confidence 46899999999999999999998874 2433 13343333322222221 0112211 11 234
Q ss_pred ccCCCcEEEEeCCCCCCC---C-Cchhh-----hHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 169 LFEDAEWALLIGAKPRGP---G-MERAG-----LLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 169 al~dADiViitag~~rk~---g-~~r~d-----ll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
++++.|+||.+++..... . .+..+ .+..|+.-...+.+.+.+. ..-.++|++|-
T Consensus 76 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~-~~~~~~v~~SS 138 (353)
T PLN02896 76 AVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS-KTVKRVVFTSS 138 (353)
T ss_pred HHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc-CCccEEEEEec
Confidence 567899999998764211 1 11122 2333445566666666653 21235665553
No 138
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.44 E-value=0.048 Score=53.49 Aligned_cols=114 Identities=14% Similarity=0.032 Sum_probs=63.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-c------Cccc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-I------NPYE 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~------~~~e 168 (398)
.++|.|+||+|+||++++..|+..|. .|.. +. ++.+..+ ....+.... ....++.+. . ...+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g~-----~V~~-~~---r~~~~~~-~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~ 73 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRGY-----TVKA-TV---RDLTDRK-KTEHLLALD-GAKERLKLFKADLLEESSFEQ 73 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-----EEEE-EE---CCCcchH-HHHHHHhcc-CCCCceEEEecCCCCcchHHH
Confidence 36899999999999999999998874 2432 12 2222221 111111100 000112211 1 1235
Q ss_pred ccCCCcEEEEeCCCCCC-CCCchhhhHHHHHHHHHHHHHHHHHhcCCC-eEEEEEC
Q 015897 169 LFEDAEWALLIGAKPRG-PGMERAGLLDINGQIFAEQGKALNAVASRN-VKVIVVG 222 (398)
Q Consensus 169 al~dADiViitag~~rk-~g~~r~dll~~N~~i~~~i~~~i~~~a~p~-a~vIvvt 222 (398)
+++++|+||.+++.... ......+++..|+.-...+.+.+.+. ++ ..||.+|
T Consensus 74 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~--~~v~rvV~~S 127 (322)
T PLN02986 74 AIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKET--PSVKRVILTS 127 (322)
T ss_pred HHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc--CCccEEEEec
Confidence 57789999999875321 11122345677888888888777763 33 2455554
No 139
>PLN02240 UDP-glucose 4-epimerase
Probab=96.43 E-value=0.044 Score=54.29 Aligned_cols=118 Identities=13% Similarity=0.099 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-c--Ccc----
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-I--NPY---- 167 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~--~~~---- 167 (398)
..+||.|+||+|++|++++..|+..+. .|.+ + ++...........+.+.......++... . .+.
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-----~V~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~ 74 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGY-----KVVV--I--DNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALE 74 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-----EEEE--E--eCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHH
Confidence 356999999999999999999998763 2433 2 3211111111111111100000011111 1 122
Q ss_pred cccC--CCcEEEEeCCCCC-CCC-CchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 168 ELFE--DAEWALLIGAKPR-GPG-MERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 168 eal~--dADiViitag~~r-k~g-~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+.++ +.|+||.+++... .+. ......+..|......+.+.+.+. +. ..+|.+|.
T Consensus 75 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~~v~~Ss 132 (352)
T PLN02240 75 KVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GC-KKLVFSSS 132 (352)
T ss_pred HHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-CEEEEEcc
Confidence 2233 6899999887542 111 234456888888888888888764 22 34555553
No 140
>PRK06194 hypothetical protein; Provisional
Probab=96.40 E-value=0.041 Score=52.83 Aligned_cols=114 Identities=15% Similarity=-0.007 Sum_probs=64.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ec--Ccccc---
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GI--NPYEL--- 169 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~--~~~ea--- 169 (398)
+++|.|+||+|.+|.+++..|+..|. .+.+ .|++.+.++....++.... .++.. .. .+++.
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~d~~~~~~ 72 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-----KLVL----ADVQQDALDRAVAELRAQG----AEVLGVRTDVSDAAQVEA 72 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-----EEEE----EeCChHHHHHHHHHHHhcC----CeEEEEECCCCCHHHHHH
Confidence 46899999999999999999998874 2443 3666666666666654321 11211 11 12222
Q ss_pred -c-------CCCcEEEEeCCCCCC-C--CCchh---hhHHHHHH----HHHHHHHHHHHhcCCC-----eEEEEECC
Q 015897 170 -F-------EDAEWALLIGAKPRG-P--GMERA---GLLDINGQ----IFAEQGKALNAVASRN-----VKVIVVGN 223 (398)
Q Consensus 170 -l-------~dADiViitag~~rk-~--g~~r~---dll~~N~~----i~~~i~~~i~~~a~p~-----a~vIvvtN 223 (398)
+ ...|+||..+|.... + ..+.. ..+..|.. +.+.+.+.+.+. +.+ +.+|+++-
T Consensus 73 ~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~~~~~g~iv~~sS 148 (287)
T PRK06194 73 LADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAA-AEKDPAYEGHIVNTAS 148 (287)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCCCCCCeEEEEeCC
Confidence 2 246999999886432 1 11111 22444443 444555556654 232 56666654
No 141
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=96.40 E-value=0.0046 Score=60.77 Aligned_cols=122 Identities=21% Similarity=0.196 Sum_probs=71.9
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcC-C-C-------cceEEEecCcccc
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLF-P-L-------LREVKIGINPYEL 169 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~-~-~-------~~~v~i~~~~~ea 169 (398)
|.|+||+|++|+.++..|+..+. -.|+++ |+++..+....++|..... + . ..+++-.......
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p------~~lil~--d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~ 72 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP------KKLILF--DRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRI 72 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-------SEEEEE--ES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCC------CeEEEe--CCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHH
Confidence 67999999999999999998865 123344 7888888888888753220 1 1 1122111113466
Q ss_pred cC--CCcEEEEeCCCCCCCCC--chhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEE----CCCchhHH
Q 015897 170 FE--DAEWALLIGAKPRGPGM--ERAGLLDINGQIFAEQGKALNAVASRNVKVIVV----GNPCNTNA 229 (398)
Q Consensus 170 l~--dADiViitag~~rk~g~--~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvv----tNP~d~~t 229 (398)
++ +.|+|+.+|...--|=+ .-.+.+..|+-=-+.+++...++ +-+-.|.+- .||.++|.
T Consensus 73 ~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv~PtnvmG 139 (293)
T PF02719_consen 73 FEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAVNPTNVMG 139 (293)
T ss_dssp TT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCSS--SHHH
T ss_pred HhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccCCCCcHHH
Confidence 77 99999999875433322 34567888887788888888886 455555554 46777653
No 142
>PRK06545 prephenate dehydrogenase; Validated
Probab=96.39 E-value=0.04 Score=55.68 Aligned_cols=68 Identities=16% Similarity=0.246 Sum_probs=42.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
.||+||| .|.+|.+++..|...+. ++.+ ++.|.+...+. ..... ... -...++..+++++||+|
T Consensus 1 ~~I~iIG-~GliG~siA~~L~~~G~-----~v~i--~~~~~~~~~~~---~a~~~---~~~--~~~~~~~~~~~~~aDlV 64 (359)
T PRK06545 1 RTVLIVG-LGLIGGSLALAIKAAGP-----DVFI--IGYDPSAAQLA---RALGF---GVI--DELAADLQRAAAEADLI 64 (359)
T ss_pred CeEEEEE-eCHHHHHHHHHHHhcCC-----CeEE--EEeCCCHHHHH---HHhcC---CCC--cccccCHHHHhcCCCEE
Confidence 3799999 59999999999998875 2443 44454432221 11110 110 11234456778999999
Q ss_pred EEeC
Q 015897 177 LLIG 180 (398)
Q Consensus 177 iita 180 (398)
|++.
T Consensus 65 ilav 68 (359)
T PRK06545 65 VLAV 68 (359)
T ss_pred EEeC
Confidence 9985
No 143
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=96.38 E-value=0.02 Score=60.15 Aligned_cols=101 Identities=19% Similarity=0.226 Sum_probs=63.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccC---C
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFE---D 172 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~---d 172 (398)
|.+|+||| .|.+|..+|..|+..|. .|.+ + |++.++.+.......... ..+....+..+.++ +
T Consensus 1 ~~~IgvIG-LG~MG~~lA~nL~~~G~-----~V~v--~--dr~~~~~~~l~~~~~~~g----~~i~~~~s~~e~v~~l~~ 66 (470)
T PTZ00142 1 MSDIGLIG-LAVMGQNLALNIASRGF-----KISV--Y--NRTYEKTEEFVKKAKEGN----TRVKGYHTLEELVNSLKK 66 (470)
T ss_pred CCEEEEEe-EhHHHHHHHHHHHHCCC-----eEEE--E--eCCHHHHHHHHHhhhhcC----CcceecCCHHHHHhcCCC
Confidence 45899999 69999999999999885 3544 4 677777664443211101 12233344444444 5
Q ss_pred CcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCc
Q 015897 173 AEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPC 225 (398)
Q Consensus 173 ADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~ 225 (398)
+|+|+++.-. .+.++++...+..+..++.+||..+|-.
T Consensus 67 ~d~Iil~v~~---------------~~~v~~vi~~l~~~L~~g~iIID~gn~~ 104 (470)
T PTZ00142 67 PRKVILLIKA---------------GEAVDETIDNLLPLLEKGDIIIDGGNEW 104 (470)
T ss_pred CCEEEEEeCC---------------hHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 8988776321 2455555556655546788999999853
No 144
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.046 Score=51.01 Aligned_cols=113 Identities=11% Similarity=0.079 Sum_probs=64.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-c--Cccc----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-I--NPYE---- 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~--~~~e---- 168 (398)
.++|.|+||+|.+|.+++..|+..|. .+.+ .+++++.++....+++... .++.+. . .+.+
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~ 73 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGA-----TVAF----NDGLAAEARELAAALEAAG----GRAHAIAADLADPASVQR 73 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCC-----EEEE----EeCCHHHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHH
Confidence 36899999999999999999998774 2443 2566676666666664321 111111 1 1222
Q ss_pred -------ccCCCcEEEEeCCCCCC-C--CCchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 169 -------LFEDAEWALLIGAKPRG-P--GMERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 169 -------al~dADiViitag~~rk-~--g~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+.|+||.++|.... + ..+.. ..+..|.. +.+.+.+.+.+. ..+.+|+++-
T Consensus 74 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~isS 143 (250)
T PRK12939 74 FFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS--GRGRIVNLAS 143 (250)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEECc
Confidence 12578999998876432 1 11221 22344444 344444444442 4567777765
No 145
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=96.37 E-value=0.027 Score=55.66 Aligned_cols=124 Identities=16% Similarity=0.121 Sum_probs=69.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHH--HhhhcCCCcceEEEecCcccccCCCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAME--LEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~D--L~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
|||+|+|| |.||..++..|...|. ++.+ +++..+.++..-.+ |.-........+.+...+.+.....|
T Consensus 3 m~I~IiGa-GaiG~~~a~~L~~~G~-----~V~l----v~r~~~~~~~i~~~~Gl~i~~~g~~~~~~~~~~~~~~~~~~D 72 (305)
T PRK05708 3 MTWHILGA-GSLGSLWACRLARAGL-----PVRL----ILRDRQRLAAYQQAGGLTLVEQGQASLYAIPAETADAAEPIH 72 (305)
T ss_pred ceEEEECC-CHHHHHHHHHHHhCCC-----CeEE----EEechHHHHHHhhcCCeEEeeCCcceeeccCCCCcccccccC
Confidence 68999995 9999999999998764 3665 35554455433221 10000000011112122234456889
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCCceEEecCc
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPAKNFHALTR 249 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~kvig~gt~ 249 (398)
+||++.... -..+..+.+..+.+++..|+.+-|=++....+. +..+. .+++++.+.
T Consensus 73 ~viv~vK~~----------------~~~~al~~l~~~l~~~t~vv~lQNGv~~~e~l~-~~~~~--~~v~~g~~~ 128 (305)
T PRK05708 73 RLLLACKAY----------------DAEPAVASLAHRLAPGAELLLLQNGLGSQDAVA-ARVPH--ARCIFASST 128 (305)
T ss_pred EEEEECCHH----------------hHHHHHHHHHhhCCCCCEEEEEeCCCCCHHHHH-HhCCC--CcEEEEEee
Confidence 999985311 122334445555468899999999987655443 33321 256655443
No 146
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.37 E-value=0.015 Score=53.28 Aligned_cols=107 Identities=14% Similarity=0.131 Sum_probs=62.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
|||+||||+|.+|+.++.....+|. +..++ =+|..++... +... -...++---+...+++.+-|+|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH----eVTAi-----vRn~~K~~~~----~~~~-i~q~Difd~~~~a~~l~g~DaV 66 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH----EVTAI-----VRNASKLAAR----QGVT-ILQKDIFDLTSLASDLAGHDAV 66 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC----eeEEE-----EeChHhcccc----ccce-eecccccChhhhHhhhcCCceE
Confidence 6999999999999999999999986 22343 2555554321 1000 0111111112235889999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCc
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPC 225 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~ 225 (398)
|.+-|.+. ++.+ ..-.+-...+...++.. -...+++++.--
T Consensus 67 IsA~~~~~-~~~~-----~~~~k~~~~li~~l~~a--gv~RllVVGGAG 107 (211)
T COG2910 67 ISAFGAGA-SDND-----ELHSKSIEALIEALKGA--GVPRLLVVGGAG 107 (211)
T ss_pred EEeccCCC-CChh-----HHHHHHHHHHHHHHhhc--CCeeEEEEcCcc
Confidence 99866442 2211 11123355555556652 467888888653
No 147
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=96.36 E-value=0.0086 Score=65.30 Aligned_cols=114 Identities=14% Similarity=0.102 Sum_probs=67.3
Q ss_pred ccCCCEEEEEcCCCchHHHHHHHHHhc-CcCCCCCceEEEecccccchhhHHHHHHHHhhhc-CCCcceEEEecC---cc
Q 015897 93 WKKMVNIAVSGAAGMIANHLLFKLAAG-EVLGPDQPIALKLLGSERSLQALEGVAMELEDSL-FPLLREVKIGIN---PY 167 (398)
Q Consensus 93 ~~~~~KI~IiGA~G~vG~~la~~L~~~-~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~-~~~~~~v~i~~~---~~ 167 (398)
.++++||.|+||+|+||++++..|+.. +. .|.. +|++..... ++.... ..+ ....++.. ..
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~-----~V~~----l~r~~~~~~----~~~~~~~~~~-~~gDl~d~~~~l~ 377 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNY-----EVYG----LDIGSDAIS----RFLGHPRFHF-VEGDISIHSEWIE 377 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCc-----EEEE----EeCCchhhh----hhcCCCceEE-EeccccCcHHHHH
Confidence 356789999999999999999999974 43 2332 244332211 111000 000 00111111 13
Q ss_pred cccCCCcEEEEeCCCCC--CCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 168 ELFEDAEWALLIGAKPR--GPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 168 eal~dADiViitag~~r--k~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
++++++|+||.+++... .......+....|+.-...+.+++.+. . ..+|.+|.
T Consensus 378 ~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~--~~~V~~SS 432 (660)
T PRK08125 378 YHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N--KRIIFPST 432 (660)
T ss_pred HHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C--CeEEEEcc
Confidence 46789999999887542 222344567788888888888888885 3 35555554
No 148
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.36 E-value=0.017 Score=56.46 Aligned_cols=64 Identities=11% Similarity=0.215 Sum_probs=43.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
+||+||| .|.+|..++..|+..+. ++.+ + |++.++++... .. .+....+..+.+++||+|
T Consensus 3 ~~IgviG-~G~mG~~~a~~l~~~g~-----~v~~--~--d~~~~~~~~~~----~~------g~~~~~~~~e~~~~~d~v 62 (296)
T PRK11559 3 MKVGFIG-LGIMGKPMSKNLLKAGY-----SLVV--Y--DRNPEAVAEVI----AA------GAETASTAKAVAEQCDVI 62 (296)
T ss_pred ceEEEEc-cCHHHHHHHHHHHHCCC-----eEEE--E--cCCHHHHHHHH----HC------CCeecCCHHHHHhcCCEE
Confidence 5899999 59999999999998764 2433 3 66666554322 11 122334456778999999
Q ss_pred EEeC
Q 015897 177 LLIG 180 (398)
Q Consensus 177 iita 180 (398)
|++.
T Consensus 63 i~~v 66 (296)
T PRK11559 63 ITML 66 (296)
T ss_pred EEeC
Confidence 9985
No 149
>PLN02583 cinnamoyl-CoA reductase
Probab=96.35 E-value=0.027 Score=55.01 Aligned_cols=118 Identities=12% Similarity=0.036 Sum_probs=65.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcc--eEEEec--CcccccC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR--EVKIGI--NPYELFE 171 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~--~v~i~~--~~~eal~ 171 (398)
.++|.|+||+|++|++++..|+..|. .|.+ ...+.+...+.....++.... .... ...++. ...++++
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~-----~V~~--~~R~~~~~~~~~~~~~l~~~~-~~~~~~~~Dl~d~~~~~~~l~ 77 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGY-----TVHA--AVQKNGETEIEKEIRGLSCEE-ERLKVFDVDPLDYHSILDALK 77 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC-----EEEE--EEcCchhhhHHHHHHhcccCC-CceEEEEecCCCHHHHHHHHc
Confidence 45899999999999999999999875 2433 111112222222222321100 0000 111111 1246788
Q ss_pred CCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 172 DAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 172 dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
++|.|+..++.+........+++..|+.-...+.+.+.+.. .-..||++|
T Consensus 78 ~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~riV~~S 127 (297)
T PLN02583 78 GCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTD-TIEKVVFTS 127 (297)
T ss_pred CCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEec
Confidence 99998866543321111234567888888888888877641 123555554
No 150
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.33 E-value=0.034 Score=52.34 Aligned_cols=114 Identities=17% Similarity=0.170 Sum_probs=65.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEE-EecC--ccc----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVK-IGIN--PYE---- 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~-i~~~--~~e---- 168 (398)
.+++.|+||+|.+|.+++..|+..|. .|.+ .+++++.++....++.+.. .++. +..| +.+
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~ 73 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGA-----AVAI----ADLNQDGANAVADEINKAG----GKAIGVAMDVTNEDAVNA 73 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-----eEEE----EeCChHHHHHHHHHHHhcC----ceEEEEECCCCCHHHHHH
Confidence 46899999999999999999998875 2443 3566666665666655422 1111 1111 111
Q ss_pred -------ccCCCcEEEEeCCCCCC-C----C-CchhhhHHHHHHH----HHHHHHHHHHhcCCCeEEEEECC
Q 015897 169 -------LFEDAEWALLIGAKPRG-P----G-MERAGLLDINGQI----FAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 169 -------al~dADiViitag~~rk-~----g-~~r~dll~~N~~i----~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+...|+||.++|.... + . .+-.+.+..|..- .+.+.+.+.+. ...+.+|+++-
T Consensus 74 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~~~~iv~~ss 144 (262)
T PRK13394 74 GIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD-DRGGVVIYMGS 144 (262)
T ss_pred HHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh-cCCcEEEEEcc
Confidence 22358999998876421 1 1 1122334455443 56666666232 34566776663
No 151
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=96.33 E-value=0.021 Score=56.62 Aligned_cols=112 Identities=21% Similarity=0.181 Sum_probs=70.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccch--hhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSL--QALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~--~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
|||+|+|| |.||+-++..|.+.+ . .+.+. -+++ +++...-..+.+.. ...........+.+.+..+|
T Consensus 1 mkI~IlGa-GAvG~l~g~~L~~~g-~----~V~~~----~R~~~~~~l~~~GL~i~~~~-~~~~~~~~~~~~~~~~~~~D 69 (307)
T COG1893 1 MKILILGA-GAIGSLLGARLAKAG-H----DVTLL----VRSRRLEALKKKGLRIEDEG-GNFTTPVVAATDAEALGPAD 69 (307)
T ss_pred CeEEEECC-cHHHHHHHHHHHhCC-C----eEEEE----ecHHHHHHHHhCCeEEecCC-CccccccccccChhhcCCCC
Confidence 69999995 999999999999988 2 24441 1222 22222222222222 10011223456778888999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHC
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNA 236 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~ 236 (398)
+||++... --..+..+.+..+..++.+|+..-|=....- .+.+..
T Consensus 70 lviv~vKa----------------~q~~~al~~l~~~~~~~t~vl~lqNG~g~~e-~l~~~~ 114 (307)
T COG1893 70 LVIVTVKA----------------YQLEEALPSLAPLLGPNTVVLFLQNGLGHEE-ELRKIL 114 (307)
T ss_pred EEEEEecc----------------ccHHHHHHHhhhcCCCCcEEEEEeCCCcHHH-HHHHhC
Confidence 99998532 2344566666777678899999999887766 555544
No 152
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=96.33 E-value=0.02 Score=56.55 Aligned_cols=122 Identities=20% Similarity=0.188 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHH---HHhhhcCCC-cceEEEecCccccc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAM---ELEDSLFPL-LREVKIGINPYELF 170 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~---DL~d~~~~~-~~~v~i~~~~~eal 170 (398)
.++||+|+|+ |.||..++..|...+. ++.+ + .++. .+.... .+....... ...+... ...++.
T Consensus 4 ~~m~I~IiG~-GaiG~~lA~~L~~~g~-----~V~~--~--~r~~--~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~ 70 (313)
T PRK06249 4 ETPRIGIIGT-GAIGGFYGAMLARAGF-----DVHF--L--LRSD--YEAVRENGLQVDSVHGDFHLPPVQAY-RSAEDM 70 (313)
T ss_pred cCcEEEEECC-CHHHHHHHHHHHHCCC-----eEEE--E--EeCC--HHHHHhCCeEEEeCCCCeeecCceEE-cchhhc
Confidence 3579999995 9999999999998764 3554 2 3332 121111 000000000 0012222 234467
Q ss_pred CCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCCceEEecC
Q 015897 171 EDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPAKNFHALT 248 (398)
Q Consensus 171 ~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~kvig~gt 248 (398)
..+|+||++..... ..+..+.+.....+++.|+...|=.+..-. +.++.|. .+++++.+
T Consensus 71 ~~~D~vilavK~~~----------------~~~~~~~l~~~~~~~~~iv~lqNG~~~~e~-l~~~~~~--~~v~~g~~ 129 (313)
T PRK06249 71 PPCDWVLVGLKTTA----------------NALLAPLIPQVAAPDAKVLLLQNGLGVEEQ-LREILPA--EHLLGGLC 129 (313)
T ss_pred CCCCEEEEEecCCC----------------hHhHHHHHhhhcCCCCEEEEecCCCCcHHH-HHHHCCC--CcEEEEee
Confidence 88999999853221 123333444443578899999998764333 3344321 25555443
No 153
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=96.33 E-value=0.03 Score=54.46 Aligned_cols=107 Identities=18% Similarity=0.175 Sum_probs=60.2
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHH-HHHHHhhhcCCCcceEEEecC-ccc-----ccC
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEG-VAMELEDSLFPLLREVKIGIN-PYE-----LFE 171 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g-~a~DL~d~~~~~~~~v~i~~~-~~e-----al~ 171 (398)
|.|+||+|+||++++..|+..|. . .+.+ +|.......... ...|+.|.. . . .+ ..+ .+.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~-~---~v~~--~~~~~~~~~~~~~~~~~~~d~~-~------~-~~~~~~~~~~~~~~ 67 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGI-T---DILV--VDNLKDGTKFVNLVDLDIADYM-D------K-EDFLAQIMAGDDFG 67 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCC-c---eEEE--ecCCCcchHHHhhhhhhhhhhh-h------H-HHHHHHHhcccccC
Confidence 68999999999999999998774 1 1332 322111111000 111222111 0 0 00 111 224
Q ss_pred CCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 172 DAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 172 dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
++|+||.+++.+.....+.......|......+.+.+.+. +..+|.+|
T Consensus 68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~---~~~~i~~S 115 (308)
T PRK11150 68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER---EIPFLYAS 115 (308)
T ss_pred CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc---CCcEEEEc
Confidence 7899999887543223344456788888888888888774 23555554
No 154
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=96.31 E-value=0.01 Score=57.87 Aligned_cols=111 Identities=13% Similarity=0.073 Sum_probs=66.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe--cCcccccCCCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG--INPYELFEDAE 174 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~--~~~~eal~dAD 174 (398)
+||.|+||+|++|++++..|+..+. .|.. ++++.+... ++.+.... .....+. ....+.++++|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~-----~V~~----~~r~~~~~~----~~~~~~~~-~~~~D~~~~~~l~~~~~~~d 66 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE-----EVRV----LVRPTSDRR----NLEGLDVE-IVEGDLRDPASLRKAVAGCR 66 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC-----EEEE----EEecCcccc----ccccCCce-EEEeeCCCHHHHHHHHhCCC
Confidence 4899999999999999999998874 2432 244433321 11111000 0011111 12345677899
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+||.+++.......+.......|+.-...+.+.+.+. + -..+|.++.
T Consensus 67 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~v~~SS 113 (328)
T TIGR03466 67 ALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-G-VERVVYTSS 113 (328)
T ss_pred EEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-C-CCeEEEEec
Confidence 9999876432223345566778888888888888774 2 235555554
No 155
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.30 E-value=0.022 Score=56.41 Aligned_cols=103 Identities=20% Similarity=0.239 Sum_probs=65.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
..+||+|+|+ |.+|..++..|...+.. .|.+ .+++.++++..+.++.. .+....+.++.+.++|
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~----~V~v----~~r~~~ra~~la~~~g~-------~~~~~~~~~~~l~~aD 240 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGVA----EITI----ANRTYERAEELAKELGG-------NAVPLDELLELLNEAD 240 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCCC----EEEE----EeCCHHHHHHHHHHcCC-------eEEeHHHHHHHHhcCC
Confidence 3579999995 99999999998875531 2444 37777777666665431 1211234567789999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhH
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTN 228 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~ 228 (398)
+||.+.+.+.. ..++... ++.....+.++|-+++|-|+=
T Consensus 241 vVi~at~~~~~------------~~~~~~~---~~~~~~~~~~viDlavPrdi~ 279 (311)
T cd05213 241 VVISATGAPHY------------AKIVERA---MKKRSGKPRLIVDLAVPRDIE 279 (311)
T ss_pred EEEECCCCCch------------HHHHHHH---HhhCCCCCeEEEEeCCCCCCc
Confidence 99998765531 1112221 222112467899999998853
No 156
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=96.30 E-value=0.01 Score=58.00 Aligned_cols=99 Identities=16% Similarity=0.056 Sum_probs=59.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccC--CCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFE--DAE 174 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~--dAD 174 (398)
|||.|+||+|++|++++..|+..+- +.. +|+.... ...|+.|.. ...+.++ +.|
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g~------V~~----~~~~~~~---~~~Dl~d~~-----------~~~~~~~~~~~D 56 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLGN------LIA----LDVHSTD---YCGDFSNPE-----------GVAETVRKIRPD 56 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccCC------EEE----ecccccc---ccCCCCCHH-----------HHHHHHHhcCCC
Confidence 4899999999999999999987651 322 1332111 011222111 1123344 589
Q ss_pred EEEEeCCCCCCC--CCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 175 WALLIGAKPRGP--GMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 175 iViitag~~rk~--g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
+||.+++..... ..+.......|+.-...+++.+.+. +.++|.+|
T Consensus 57 ~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~---g~~~v~~S 103 (299)
T PRK09987 57 VIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV---GAWVVHYS 103 (299)
T ss_pred EEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEc
Confidence 999988754211 1223344567888888999888875 24565555
No 157
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.096 Score=49.17 Aligned_cols=46 Identities=26% Similarity=0.278 Sum_probs=32.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
++|.|+||+|.+|++++..|+..|. .+.+ + ..++.+.++....++.
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~G~-----~v~i-~--~~r~~~~~~~~~~~~~ 52 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDGA-----LVAI-H--YGRNKQAADETIREIE 52 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-----EEEE-E--cCCCHHHHHHHHHHHH
Confidence 6899999999999999999998774 2433 1 2455555554554443
No 158
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.28 E-value=0.022 Score=53.66 Aligned_cols=115 Identities=12% Similarity=0.141 Sum_probs=63.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--C-------cc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--N-------PY 167 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~-------~~ 167 (398)
|+|.|+||+|.+|.+++..|+..|. .+.+ .+++++.++....++.... ......+.. + ..
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~~~~--~~~~~Dl~~~~~i~~~~~~~~ 69 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH-----KVIA----TGRRQERLQELKDELGDNL--YIAQLDVRNRAAIEEMLASLP 69 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-----EEEE----EECCHHHHHHHHHHhccce--EEEEecCCCHHHHHHHHHHHH
Confidence 5799999999999999999998774 2443 3667666654443322100 000111110 0 11
Q ss_pred cccCCCcEEEEeCCCCC--CC--CCchh---hhHHHHHHH----HHHHHHHHHHhcCCCeEEEEECCC
Q 015897 168 ELFEDAEWALLIGAKPR--GP--GMERA---GLLDINGQI----FAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 168 eal~dADiViitag~~r--k~--g~~r~---dll~~N~~i----~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
+.+.+.|+||..+|... .+ ..+.. +.+..|..- .+.+.+.+.+. ..+.+|++|-.
T Consensus 70 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~isS~ 135 (248)
T PRK10538 70 AEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER--NHGHIINIGST 135 (248)
T ss_pred HHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEECCc
Confidence 22347999999887532 12 11222 234555443 45555555542 34667777753
No 159
>PRK06196 oxidoreductase; Provisional
Probab=96.27 E-value=0.027 Score=55.29 Aligned_cols=114 Identities=10% Similarity=0.012 Sum_probs=65.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--C-------c
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--N-------P 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~-------~ 166 (398)
.++|.|+||+|.+|.+++..|+..|. .|.+ .+++.++++....++.... .+ ...++. + -
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~-----~Vv~----~~R~~~~~~~~~~~l~~v~-~~--~~Dl~d~~~v~~~~~~~ 93 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGA-----HVIV----PARRPDVAREALAGIDGVE-VV--MLDLADLESVRAFAERF 93 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHhhhCe-EE--EccCCCHHHHHHHHHHH
Confidence 35899999999999999999999875 2443 3566666665555543211 00 111111 0 0
Q ss_pred ccccCCCcEEEEeCCCCCCCC-C--c-hhhhHHHH----HHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 YELFEDAEWALLIGAKPRGPG-M--E-RAGLLDIN----GQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 ~eal~dADiViitag~~rk~g-~--~-r~dll~~N----~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+...|++|..+|....+. . + -...+..| ..+.+.+.+.+.+. ..+.||+++-
T Consensus 94 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~--~~~~iV~vSS 156 (315)
T PRK06196 94 LDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG--AGARVVALSS 156 (315)
T ss_pred HhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCeEEEECC
Confidence 122357899999988642221 1 1 11223444 33466666667663 3567777764
No 160
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.074 Score=49.29 Aligned_cols=114 Identities=15% Similarity=0.102 Sum_probs=62.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcc---------
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPY--------- 167 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~--------- 167 (398)
++|.|+||+|.+|.+++..|+..|. .|.+ ++++.+.+.....++.+.. .. .-+..-..+.
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g~-----~V~~----~~r~~~~~~~~~~~l~~~~-~~-~~~~~D~~~~~~~~~~~~~ 75 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEGY-----KVAI----TARDQKELEEAAAELNNKG-NV-LGLAADVRDEADVQRAVDA 75 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC-----EEEE----eeCCHHHHHHHHHHHhccC-cE-EEEEccCCCHHHHHHHHHH
Confidence 6899999999999999999998764 2433 3566666665555654321 10 0011101111
Q ss_pred --cccCCCcEEEEeCCCCCCC---CCchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 168 --ELFEDAEWALLIGAKPRGP---GMERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 168 --eal~dADiViitag~~rk~---g~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
+.+...|+||.++|..... ..+.. +.+..|+. +++.+.+.+. ...+.+++++..
T Consensus 76 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~~iv~~ss~ 141 (237)
T PRK07326 76 IVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK---RGGGYIINISSL 141 (237)
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH---HCCeEEEEECCh
Confidence 1234789999988754321 11222 23444544 3333344442 234667777754
No 161
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.24 E-value=0.041 Score=53.30 Aligned_cols=66 Identities=20% Similarity=0.272 Sum_probs=40.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
+||+||| .|.+|..++..|...+.. ..+.. .|++++.++. +.++ .. +.... +.+++.+||+|
T Consensus 1 m~I~iIG-~G~mG~sla~~l~~~g~~-----~~v~~--~d~~~~~~~~-~~~~-----g~---~~~~~-~~~~~~~aD~V 62 (275)
T PRK08507 1 MKIGIIG-LGLMGGSLGLALKEKGLI-----SKVYG--YDHNELHLKK-ALEL-----GL---VDEIV-SFEELKKCDVI 62 (275)
T ss_pred CEEEEEc-cCHHHHHHHHHHHhcCCC-----CEEEE--EcCCHHHHHH-HHHC-----CC---CcccC-CHHHHhcCCEE
Confidence 4899999 599999999999988751 22222 3666665442 2221 11 11112 23335569999
Q ss_pred EEeC
Q 015897 177 LLIG 180 (398)
Q Consensus 177 iita 180 (398)
|++.
T Consensus 63 ilav 66 (275)
T PRK08507 63 FLAI 66 (275)
T ss_pred EEeC
Confidence 9985
No 162
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.21 E-value=0.07 Score=49.77 Aligned_cols=112 Identities=17% Similarity=0.159 Sum_probs=63.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-c--Ccc-----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-I--NPY----- 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~--~~~----- 167 (398)
.++|.|+||+|.+|.+++..|+..|. .+.+ .+++.+.++....++.+ . .++.+. . .+.
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~~-~----~~~~~~~~D~~~~~~~~~ 70 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGA-----RVVV----TDRNEEAAERVAAEILA-G----GRAIAVAADVSDEADVEA 70 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHhc-C----CeEEEEECCCCCHHHHHH
Confidence 46899999999999999999998874 2443 36776666655555543 1 011111 1 111
Q ss_pred ------cccCCCcEEEEeCCCCC--CCC--Cch---hhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 168 ------ELFEDAEWALLIGAKPR--GPG--MER---AGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 168 ------eal~dADiViitag~~r--k~g--~~r---~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+.+...|+||.++|... .+- .+. .+.+..|.. +.+.+.+.+.+. ..+.+|+++-
T Consensus 71 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~~sS 141 (251)
T PRK07231 71 AVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE--GGGAIVNVAS 141 (251)
T ss_pred HHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCcEEEEEcC
Confidence 22346799999887632 221 111 223444543 455555555543 3455666654
No 163
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.21 E-value=0.075 Score=49.62 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=62.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ecC--ccc----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GIN--PYE---- 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~~--~~e---- 168 (398)
.++|.|+||+|.+|++++..|+..+. .+.+ .+++.+.++....++.+.. .++.+ ..| +.+
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~-----~v~~----~~r~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~ 69 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGA-----KVAV----FDLNREAAEKVAADIRAKG----GNAQAFACDITDRDSVDT 69 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-----EEEE----ecCCHHHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHH
Confidence 46899999999999999999998875 2443 3566666655555554321 11111 111 111
Q ss_pred -------ccCCCcEEEEeCCCCCCCC---Cchh---hhHHHHHHHHHHH----HHHHHHhcCCCeEEEEECC
Q 015897 169 -------LFEDAEWALLIGAKPRGPG---MERA---GLLDINGQIFAEQ----GKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 169 -------al~dADiViitag~~rk~g---~~r~---dll~~N~~i~~~i----~~~i~~~a~p~a~vIvvtN 223 (398)
.+...|+||..+|...... .+.. ..+..|..-...+ .+.+.+. ..+.+|+++.
T Consensus 70 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~ii~iss 139 (250)
T TIGR03206 70 AVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER--GAGRIVNIAS 139 (250)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEECc
Confidence 1235799999887532111 1221 2355555444443 4444442 4466776664
No 164
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.18 E-value=0.07 Score=50.00 Aligned_cols=114 Identities=13% Similarity=0.056 Sum_probs=65.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ecC--cc-----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GIN--PY----- 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~~--~~----- 167 (398)
.++|.|+||+|.+|.+++..|+..|. .+.+ ++++.+.++....++.... . ++.+ ..| +.
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~-----~v~~----~~r~~~~~~~~~~~~~~~~-~---~~~~~~~Dl~~~~~~~~ 70 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGA-----KVVI----ADLNDEAAAAAAEALQKAG-G---KAIGVAMDVTDEEAINA 70 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-----eEEE----EeCCHHHHHHHHHHHHhcC-C---cEEEEEcCCCCHHHHHH
Confidence 36899999999999999999998764 2443 3677677766666654311 1 1111 111 11
Q ss_pred ------cccCCCcEEEEeCCCCCCC-C--Cch---hhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 168 ------ELFEDAEWALLIGAKPRGP-G--MER---AGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 168 ------eal~dADiViitag~~rk~-g--~~r---~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
+.+.+.|+||.+++..... - .+. .+.+..|.. +++.+.+.+++. ..+.+++++.-
T Consensus 71 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~iss~ 141 (258)
T PRK12429 71 GIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ--GGGRIINMASV 141 (258)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc--CCeEEEEEcch
Confidence 1224689999988754211 1 111 122333433 366666666663 45666666643
No 165
>PLN02572 UDP-sulfoquinovose synthase
Probab=96.17 E-value=0.021 Score=59.41 Aligned_cols=27 Identities=19% Similarity=0.187 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
+++||.|+||+|+||++++..|+..|.
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~ 72 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGY 72 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC
Confidence 357899999999999999999998874
No 166
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.044 Score=51.29 Aligned_cols=25 Identities=20% Similarity=0.127 Sum_probs=22.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
+++.|+||+|++|.+++..|+..|.
T Consensus 7 k~vlItGasggiG~~l~~~l~~~G~ 31 (248)
T PRK07806 7 KTALVTGSSRGIGADTAKILAGAGA 31 (248)
T ss_pred cEEEEECCCCcHHHHHHHHHHHCCC
Confidence 5899999999999999999998774
No 167
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.16 E-value=0.029 Score=55.22 Aligned_cols=96 Identities=13% Similarity=0.107 Sum_probs=58.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
|||+||| .|.+|..++..|+..+. +|.+ + |++.++++..... .. . ......+..+.+.++|+|
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~-----~V~~--~--dr~~~~~~~l~~~---g~-~---~~~s~~~~~~~~~~~dvI 63 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGH-----DCVG--Y--DHDQDAVKAMKED---RT-T---GVANLRELSQRLSAPRVV 63 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCC-----EEEE--E--ECCHHHHHHHHHc---CC-c---ccCCHHHHHhhcCCCCEE
Confidence 4899999 59999999999998874 3543 3 6777766544321 11 0 000001123456789999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCc
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPC 225 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~ 225 (398)
+++... ..++++.+.+.....++.+||..+|..
T Consensus 64 i~~vp~----------------~~~~~v~~~l~~~l~~g~ivid~st~~ 96 (298)
T TIGR00872 64 WVMVPH----------------GIVDAVLEELAPTLEKGDIVIDGGNSY 96 (298)
T ss_pred EEEcCc----------------hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 987421 134444455555435677888888763
No 168
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.12 Score=48.52 Aligned_cols=79 Identities=22% Similarity=0.193 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcc-------
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPY------- 167 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~------- 167 (398)
+.++|.|+||+|.||.+++..|+..|. .|.+ .+++++.++....++.... ....-+..-..+.
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~ 73 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-----DVVL----AARTAERLDEVAAEIDDLG-RRALAVPTDITDEDQCANLV 73 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-----EEEE----EeCCHHHHHHHHHHHHHhC-CceEEEecCCCCHHHHHHHH
Confidence 346899999999999999999998875 2443 3666666666666554321 1000011111112
Q ss_pred ----cccCCCcEEEEeCCCC
Q 015897 168 ----ELFEDAEWALLIGAKP 183 (398)
Q Consensus 168 ----eal~dADiViitag~~ 183 (398)
+.+...|+||..+|..
T Consensus 74 ~~~~~~~g~~d~vi~~ag~~ 93 (258)
T PRK07890 74 ALALERFGRVDALVNNAFRV 93 (258)
T ss_pred HHHHHHcCCccEEEECCccC
Confidence 2235789999988763
No 169
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=96.15 E-value=0.019 Score=56.26 Aligned_cols=66 Identities=15% Similarity=0.228 Sum_probs=46.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
+||++|| .|.+|+.++..|+..|. ++.. + |++.++.. ..+.... ......+.++.++||+|
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~aG~-----~v~v--~--~r~~~ka~---~~~~~~G------a~~a~s~~eaa~~aDvV 61 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKAGH-----EVTV--Y--NRTPEKAA---ELLAAAG------ATVAASPAEAAAEADVV 61 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHCCC-----EEEE--E--eCChhhhh---HHHHHcC------CcccCCHHHHHHhCCEE
Confidence 4899999 79999999999999986 3433 3 66666643 2222211 12334568999999999
Q ss_pred EEeCC
Q 015897 177 LLIGA 181 (398)
Q Consensus 177 iitag 181 (398)
|.+-.
T Consensus 62 itmv~ 66 (286)
T COG2084 62 ITMLP 66 (286)
T ss_pred EEecC
Confidence 98743
No 170
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.14 E-value=0.027 Score=59.64 Aligned_cols=125 Identities=19% Similarity=0.142 Sum_probs=86.6
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC------cceEEEecCcc
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL------LREVKIGINPY 167 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~------~~~v~i~~~~~ 167 (398)
-+.++|-|+||+|++|+.+...++..+.. .|. ++ |.+|.++...-++|.+.. +. .++++-...-.
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~----~i~--l~--~~~E~~~~~i~~el~~~~-~~~~~~~~igdVrD~~~~~ 318 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPK----EII--LF--SRDEYKLYLIDMELREKF-PELKLRFYIGDVRDRDRVE 318 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCC----EEE--Ee--cCchHHHHHHHHHHHhhC-CCcceEEEecccccHHHHH
Confidence 34579999999999999999999988641 244 34 677888888888888643 21 12222222345
Q ss_pred cccCC--CcEEEEeCCCCCCCCCc--hhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEE----CCCchhH
Q 015897 168 ELFED--AEWALLIGAKPRGPGME--RAGLLDINGQIFAEQGKALNAVASRNVKVIVV----GNPCNTN 228 (398)
Q Consensus 168 eal~d--ADiViitag~~rk~g~~--r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvv----tNP~d~~ 228 (398)
+++++ .|+|+.+|....-|-+| -.+....|+==...++++..++ +=+..|++- .||.|+|
T Consensus 319 ~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~V~iSTDKAV~PtNvm 386 (588)
T COG1086 319 RAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKFVLISTDKAVNPTNVM 386 (588)
T ss_pred HHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEEEEEecCcccCCchHh
Confidence 78888 99999998876666554 3566777877777888877775 445555553 3777765
No 171
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.11 E-value=0.032 Score=57.44 Aligned_cols=104 Identities=14% Similarity=0.130 Sum_probs=57.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec--CcccccC
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI--NPYELFE 171 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~--~~~eal~ 171 (398)
+.++|.|+||+|.+|.+++..|+..|. .+.+ ++++.++++... .+...... ....++. +..+.+.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-----~Vi~----l~r~~~~l~~~~---~~~~~~v~~v~~Dvsd~~~v~~~l~ 244 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-----KVVA----LTSNSDKITLEI---NGEDLPVKTLHWQVGQEAALAELLE 244 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHH---hhcCCCeEEEEeeCCCHHHHHHHhC
Confidence 356899999999999999999998875 2433 255555443221 11110100 0111111 1124467
Q ss_pred CCcEEEEeCCCCCCCCCch---hhhHHHHHH----HHHHHHHHHHH
Q 015897 172 DAEWALLIGAKPRGPGMER---AGLLDINGQ----IFAEQGKALNA 210 (398)
Q Consensus 172 dADiViitag~~rk~g~~r---~dll~~N~~----i~~~i~~~i~~ 210 (398)
+.|++|..+|.......+. .+.++.|.. +++.+.+.+++
T Consensus 245 ~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~ 290 (406)
T PRK07424 245 KVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKT 290 (406)
T ss_pred CCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999887643222222 234555544 55666666655
No 172
>PLN02256 arogenate dehydrogenase
Probab=96.08 E-value=0.083 Score=52.33 Aligned_cols=92 Identities=18% Similarity=0.153 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCccccc-CCC
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELF-EDA 173 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal-~dA 173 (398)
+++||+||| .|.+|..++..|...|. .|.. + |.+.. ...+.++ . +....+..+.+ .++
T Consensus 35 ~~~kI~IIG-~G~mG~slA~~L~~~G~-----~V~~--~--d~~~~--~~~a~~~-----g----v~~~~~~~e~~~~~a 93 (304)
T PLN02256 35 RKLKIGIVG-FGNFGQFLAKTFVKQGH-----TVLA--T--SRSDY--SDIAAEL-----G----VSFFRDPDDFCEEHP 93 (304)
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCC-----EEEE--E--ECccH--HHHHHHc-----C----CeeeCCHHHHhhCCC
Confidence 356999999 59999999999987653 2432 3 44432 1223221 1 11233344444 479
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHH-HHhcCCCeEEEEECC
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKAL-NAVASRNVKVIVVGN 223 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i-~~~a~p~a~vIvvtN 223 (398)
|+||++... ..+.++.+.+ ..+..++++|+.++.
T Consensus 94 DvVilavp~----------------~~~~~vl~~l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 94 DVVLLCTSI----------------LSTEAVLRSLPLQRLKRSTLFVDVLS 128 (304)
T ss_pred CEEEEecCH----------------HHHHHHHHhhhhhccCCCCEEEecCC
Confidence 999998531 2334444444 222257787777775
No 173
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.05 E-value=0.029 Score=55.20 Aligned_cols=92 Identities=13% Similarity=0.104 Sum_probs=53.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCC---C
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFED---A 173 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~d---A 173 (398)
|||+||| .|.+|.+++..|+..+. +|.+ + |+++++++.. .+.. .....+..+.+++ +
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g~-----~v~v--~--dr~~~~~~~~----~~~g------~~~~~s~~~~~~~~~~a 60 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDGH-----EVVG--Y--DVNQEAVDVA----GKLG------ITARHSLEELVSKLEAP 60 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCCC-----EEEE--E--ECCHHHHHHH----HHCC------CeecCCHHHHHHhCCCC
Confidence 4899999 59999999999998764 2443 3 6766665432 2111 2233344455544 6
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
|+||++...+ +.++++...+.....++.++|..|+
T Consensus 61 dvVi~~vp~~---------------~~~~~v~~~i~~~l~~g~ivid~st 95 (299)
T PRK12490 61 RTIWVMVPAG---------------EVTESVIKDLYPLLSPGDIVVDGGN 95 (299)
T ss_pred CEEEEEecCc---------------hHHHHHHHHHhccCCCCCEEEECCC
Confidence 8998874321 2333333344333246777777754
No 174
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.04 E-value=0.083 Score=49.78 Aligned_cols=118 Identities=15% Similarity=0.039 Sum_probs=65.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec---------C
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI---------N 165 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~---------~ 165 (398)
.++|.|+||+|.+|..++..|+..|. .|.+ .+++++.++....++.+...... ....++. .
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~-----~V~~----~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~ 80 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGA-----EVIL----NGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDA 80 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCC-----EEEE----EeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHH
Confidence 36899999999999999999998875 2543 36666666655555543210000 0011110 0
Q ss_pred cccccCCCcEEEEeCCCCC-CCC--Cch---hhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 166 PYELFEDAEWALLIGAKPR-GPG--MER---AGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 166 ~~eal~dADiViitag~~r-k~g--~~r---~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
..+.+...|+||..+|... .+- .+. .+.+..|+. +.+.+.+.+.+. ..+.+|++|..
T Consensus 81 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~iss~ 147 (255)
T PRK07523 81 FEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR--GAGKIINIASV 147 (255)
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh--CCeEEEEEccc
Confidence 1122345799999887642 111 111 233555644 444444444442 45677777754
No 175
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.04 E-value=0.15 Score=48.22 Aligned_cols=118 Identities=14% Similarity=0.080 Sum_probs=64.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccc------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYEL------ 169 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~ea------ 169 (398)
.++|.|+||+|.+|++++..|+..|. .+.+ .+++.+.++....++.... ....-+..-..+.+.
T Consensus 12 ~k~ilItGa~g~IG~~la~~l~~~G~-----~V~~----~~r~~~~~~~~~~~i~~~~-~~~~~~~~Dl~d~~~i~~~~~ 81 (259)
T PRK08213 12 GKTALVTGGSRGLGLQIAEALGEAGA-----RVVL----SARKAEELEEAAAHLEALG-IDALWIAADVADEADIERLAE 81 (259)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC-----EEEE----EeCCHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHH
Confidence 46899999999999999999998775 2433 3566666655554443211 000001111112222
Q ss_pred -----cCCCcEEEEeCCCCCCCCC------chhhhHHHHHHHHHHHHHHHHHh---cCCCeEEEEECC
Q 015897 170 -----FEDAEWALLIGAKPRGPGM------ERAGLLDINGQIFAEQGKALNAV---ASRNVKVIVVGN 223 (398)
Q Consensus 170 -----l~dADiViitag~~rk~g~------~r~dll~~N~~i~~~i~~~i~~~---a~p~a~vIvvtN 223 (398)
+...|.||.++|....... .-...+..|..-...+.+.+.++ ..+.+.+++++.
T Consensus 82 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS 149 (259)
T PRK08213 82 ETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVAS 149 (259)
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 2467999998875421111 11233556655555555444332 124567777765
No 176
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.021 Score=54.46 Aligned_cols=114 Identities=15% Similarity=-0.018 Sum_probs=66.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec---------Cc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI---------NP 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~---------~~ 166 (398)
.++|.|+||+|.+|..++..|+..|. .+.+ .+++++.++....++.... . ....++. .-
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~~~~~--~-~~~D~~~~~~~~~~~~~~ 72 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-----RVAI----GDLDEALAKETAAELGLVV--G-GPLDVTDPASFAAFLDAV 72 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-----EEEE----EECCHHHHHHHHHHhccce--E-EEccCCCHHHHHHHHHHH
Confidence 46899999999999999999998875 2443 3567777665555443111 0 0111110 01
Q ss_pred ccccCCCcEEEEeCCCCCC-CC--Cc---hhhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 YELFEDAEWALLIGAKPRG-PG--ME---RAGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 ~eal~dADiViitag~~rk-~g--~~---r~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+.+.|++|..+|.... +- .+ -...+..|.. +.+.+.+.+.+. ..+.|++++-
T Consensus 73 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--~~g~iv~isS 137 (273)
T PRK07825 73 EADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR--GRGHVVNVAS 137 (273)
T ss_pred HHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEEEcC
Confidence 1234578999999886431 11 11 1223455543 455555666653 4567777774
No 177
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.15 Score=48.79 Aligned_cols=117 Identities=9% Similarity=-0.011 Sum_probs=68.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc---ceEEEec--Ccc---
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL---REVKIGI--NPY--- 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~---~~v~i~~--~~~--- 167 (398)
.+.+.|+||+|.+|.+++..|+..|. .|.+ .+++.+.++..+.++.... +.. ....++. +-.
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~ 77 (263)
T PRK08339 8 GKLAFTTASSKGIGFGVARVLARAGA-----DVIL----LSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTV 77 (263)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHH
Confidence 35789999999999999999999875 2444 3667677776666664321 100 0111111 001
Q ss_pred ---cccCCCcEEEEeCCCCCCC---CCchhh---hHHHH----HHHHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 168 ---ELFEDAEWALLIGAKPRGP---GMERAG---LLDIN----GQIFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 168 ---eal~dADiViitag~~rk~---g~~r~d---ll~~N----~~i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
+.+...|++|..+|.+... ..+..+ .+..| ..+.+.+.+.+++. ..+.||+++-.
T Consensus 78 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~--~~g~Ii~isS~ 145 (263)
T PRK08339 78 KELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK--GFGRIIYSTSV 145 (263)
T ss_pred HHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCEEEEEcCc
Confidence 1234579999988865321 122222 23344 44567777777763 45777777754
No 178
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.035 Score=53.29 Aligned_cols=39 Identities=18% Similarity=0.084 Sum_probs=29.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHH
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALE 143 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~ 143 (398)
+++|.|+||+|.+|.+++..|+..|. .|.+ .+++.+.++
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~-----~V~~----~~r~~~~~~ 42 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH-----RVVG----TVRSEAARA 42 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC-----EEEE----EeCCHHHHH
Confidence 46899999999999999999998874 2443 356655554
No 179
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.13 Score=48.39 Aligned_cols=117 Identities=16% Similarity=0.056 Sum_probs=67.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec--Cc------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI--NP------ 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~--~~------ 166 (398)
.+++.|+||+|.+|.+++..|+..|. .+.+ .+++++.++....++.+...... ....+.. ..
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 76 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFAREGA-----KVVV----GARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVAL 76 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 35899999999999999999998875 2443 36677777766666654320000 0011110 00
Q ss_pred -ccccCCCcEEEEeCCCC--CCC--CCch---hhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 -YELFEDAEWALLIGAKP--RGP--GMER---AGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 -~eal~dADiViitag~~--rk~--g~~r---~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+...|++|..+|.. ..+ ..+. ...+..|.. +.+.+.+.+.+. ..+.+|+++.
T Consensus 77 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~~~iv~~sS 143 (254)
T PRK07478 77 AVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR--GGGSLIFTST 143 (254)
T ss_pred HHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCceEEEEec
Confidence 11234679999988753 222 1122 233555653 445556666553 4566776664
No 180
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.091 Score=49.11 Aligned_cols=77 Identities=18% Similarity=0.167 Sum_probs=46.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCccc-------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYE------- 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~e------- 168 (398)
.+++.|+||+|.+|.+++..|+..|. .+.+ .+++++.++....++.+.. .....+..-..+.+
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~-----~vi~----~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~ 75 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALAREGA-----SVVV----ADINAEGAERVAKQIVADG-GTAIAVQVDVSDPDSAKAMAD 75 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHH
Confidence 46899999999999999999999774 2443 3566555554554444321 11000111011222
Q ss_pred ----ccCCCcEEEEeCCC
Q 015897 169 ----LFEDAEWALLIGAK 182 (398)
Q Consensus 169 ----al~dADiViitag~ 182 (398)
.+...|+||.++|.
T Consensus 76 ~~~~~~~~id~vi~~ag~ 93 (250)
T PRK07774 76 ATVSAFGGIDYLVNNAAI 93 (250)
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 22468999998886
No 181
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.96 E-value=0.034 Score=55.31 Aligned_cols=58 Identities=7% Similarity=-0.068 Sum_probs=42.2
Q ss_pred eEEEecC--cccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHH
Q 015897 159 EVKIGIN--PYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALIC 232 (398)
Q Consensus 159 ~v~i~~~--~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~ 232 (398)
+++++++ .++++++||+||.+. .++..+-+++...+.+.+.|++++ +||-.......+
T Consensus 64 ~i~~~~~~~~~~a~~~aD~ViEav--------------~E~~~~K~~~f~~l~~~~~~~~il--aSntS~~~~~~l 123 (314)
T PRK08269 64 RIAVVARDGAADALADADLVFEAV--------------PEVLDAKREALRWLGRHVDADAII--ASTTSTFLVTDL 123 (314)
T ss_pred CeEeecCcchHHHhccCCEEEECC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEccccCCHHHH
Confidence 5666554 568899999999984 345677788888888887778777 888766544333
No 182
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.12 Score=48.05 Aligned_cols=117 Identities=20% Similarity=0.163 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEecCccc-----
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGINPYE----- 168 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~~~~e----- 168 (398)
+|+++.|+||+|.+|..++..|+..|. .|.+ .+++++.++....++.+...... ....++ +++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~ 73 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-----DLAL----VARSQDALEALAAELRSTGVKAAAYSIDLS--NPEAIAPG 73 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhCCCcEEEEEccCC--CHHHHHHH
Confidence 466899999999999999999998875 2443 35666665555444432110100 011111 111
Q ss_pred ------ccCCCcEEEEeCCCCCC-C--CCch---hhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 169 ------LFEDAEWALLIGAKPRG-P--GMER---AGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 169 ------al~dADiViitag~~rk-~--g~~r---~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
.+...|++|.++|.... + ..+. ...+..|.. +.+...+.+.+. ..+.+|+++..
T Consensus 74 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~isS~ 143 (241)
T PRK07454 74 IAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR--GGGLIINVSSI 143 (241)
T ss_pred HHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc--CCcEEEEEccH
Confidence 23458999998886432 1 1111 123444444 344455555552 35667777644
No 183
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=95.95 E-value=0.047 Score=55.34 Aligned_cols=72 Identities=11% Similarity=0.135 Sum_probs=43.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec-CcccccCCCcE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI-NPYELFEDAEW 175 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~-~~~eal~dADi 175 (398)
+||+|+||+|.||+.+...|....-|.- ..+.++.. ++..|....+. .....+.. ++.+++++.|+
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~---~~~~~~ss----~~s~g~~~~f~------~~~~~v~~~~~~~~~~~vDi 67 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDA---IRPVFFST----SQLGQAAPSFG------GTTGTLQDAFDIDALKALDI 67 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCcc---ccEEEEEc----hhhCCCcCCCC------CCcceEEcCcccccccCCCE
Confidence 4899999999999999998884444432 33434422 22222221111 11223332 23358999999
Q ss_pred EEEeCC
Q 015897 176 ALLIGA 181 (398)
Q Consensus 176 Viitag 181 (398)
|++++|
T Consensus 68 vffa~g 73 (366)
T TIGR01745 68 IITCQG 73 (366)
T ss_pred EEEcCC
Confidence 999876
No 184
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.082 Score=50.27 Aligned_cols=117 Identities=14% Similarity=0.050 Sum_probs=64.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccc------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYEL------ 169 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~ea------ 169 (398)
.+++.|+||+|.+|.+++..|+..|. .+.+ .+++.+.++....++.... ....-+..-..+++.
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~G~-----~Vi~----~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~ 79 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEAGA-----DVLI----AARTESQLDEVAEQIRAAG-RRAHVVAADLAHPEATAGLAG 79 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHH
Confidence 46899999999999999999998875 2443 3666666666666654321 100001111112222
Q ss_pred -----cCCCcEEEEeCCCCCC--CC-Cc---hhhhHHHHHHH----HHHHHHHHHHhcCCCeEEEEECC
Q 015897 170 -----FEDAEWALLIGAKPRG--PG-ME---RAGLLDINGQI----FAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 170 -----l~dADiViitag~~rk--~g-~~---r~dll~~N~~i----~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+...|+||..+|.... .. .+ -.+.+..|..- .+...+.+.+. ...+.+++++.
T Consensus 80 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~iv~~sS 147 (263)
T PRK07814 80 QAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEH-SGGGSVINISS 147 (263)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhh-cCCeEEEEEcc
Confidence 3468999998875321 11 11 12334555443 33333444443 34577777775
No 185
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=95.95 E-value=0.054 Score=51.19 Aligned_cols=97 Identities=16% Similarity=0.234 Sum_probs=65.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
+||+|||+ |.||..++..+-.... +- ++.+ + .|++++++.....-+. ... .++..+.+.+.|++
T Consensus 1 l~vgiVGc-GaIG~~l~e~v~~~~~-~~--e~v~-v--~D~~~ek~~~~~~~~~-------~~~--~s~ide~~~~~Dlv 64 (255)
T COG1712 1 LKVGIVGC-GAIGKFLLELVRDGRV-DF--ELVA-V--YDRDEEKAKELEASVG-------RRC--VSDIDELIAEVDLV 64 (255)
T ss_pred CeEEEEec-cHHHHHHHHHHhcCCc-ce--eEEE-E--ecCCHHHHHHHHhhcC-------CCc--cccHHHHhhcccee
Confidence 58999995 9999999887766542 21 2332 2 3777776653332211 111 14455566999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
+-+++ .+.+++++.++=+. +.+.+|+.++-=+|
T Consensus 65 VEaAS----------------~~Av~e~~~~~L~~-g~d~iV~SVGALad 97 (255)
T COG1712 65 VEAAS----------------PEAVREYVPKILKA-GIDVIVMSVGALAD 97 (255)
T ss_pred eeeCC----------------HHHHHHHhHHHHhc-CCCEEEEechhccC
Confidence 99987 57889999888885 68899888875554
No 186
>PRK08643 acetoin reductase; Validated
Probab=95.93 E-value=0.1 Score=49.13 Aligned_cols=118 Identities=14% Similarity=0.082 Sum_probs=64.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEec---------Cc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGI---------NP 166 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~---------~~ 166 (398)
+++.|+||+|.+|.+++..|+..|. .+.+ ++++.+.++....++.+..... .....++. ..
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 73 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGF-----KVAI----VDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQV 73 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4789999999999999999998874 2443 3566666665666655321000 00111111 01
Q ss_pred ccccCCCcEEEEeCCCCC-CCCC--ch---hhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 167 YELFEDAEWALLIGAKPR-GPGM--ER---AGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 167 ~eal~dADiViitag~~r-k~g~--~r---~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
.+.+...|++|.++|... .+-. +. ...+..|.. +.+.+.+.+.+. .+++.+++++--
T Consensus 74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~~iv~~sS~ 140 (256)
T PRK08643 74 VDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKL-GHGGKIINATSQ 140 (256)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCCEEEEECcc
Confidence 122346899999987642 2211 11 123444543 344444445443 345777777754
No 187
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.15 Score=48.65 Aligned_cols=112 Identities=11% Similarity=0.073 Sum_probs=64.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEE-EecC--ccc-----
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVK-IGIN--PYE----- 168 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~-i~~~--~~e----- 168 (398)
++|.|+||+|.+|.+++..|+..|. .+.+ .+++.+.++....++.... . ++. +..| +.+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~-----~V~~----~~r~~~~~~~~~~~l~~~~-~---~~~~~~~D~~~~~~~~~~ 67 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW-----RLAL----ADVNEEGGEETLKLLREAG-G---DGFYQRCDVRDYSQLTAL 67 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhcC-C---ceEEEEccCCCHHHHHHH
Confidence 3789999999999999999999875 2443 3566666666666655321 1 111 1111 111
Q ss_pred ------ccCCCcEEEEeCCCCCC-C--CCchh---hhHHHHH----HHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 169 ------LFEDAEWALLIGAKPRG-P--GMERA---GLLDING----QIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 169 ------al~dADiViitag~~rk-~--g~~r~---dll~~N~----~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+...|++|.++|.... + ..+.. ..+..|. .+.+.+.+.+++. ..+.+|+++-
T Consensus 68 ~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS 136 (270)
T PRK05650 68 AQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ--KSGRIVNIAS 136 (270)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC--CCCEEEEECC
Confidence 22468999998875421 1 11111 2345553 3445555556553 3466666664
No 188
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.029 Score=53.36 Aligned_cols=114 Identities=17% Similarity=0.130 Sum_probs=62.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--C-------c
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--N-------P 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~-------~ 166 (398)
.+++.|+||+|.+|.+++..|+..|. .|.+ .+++.+.++....++.... .+ ....+.. + -
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~~~~-~~-~~~Dl~~~~~~~~~~~~~ 74 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGA-----RVAI----VDIDADNGAAVAASLGERA-RF-IATDITDDAAIERAVATV 74 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHhCCee-EE-EEecCCCHHHHHHHHHHH
Confidence 35899999999999999999998875 2443 3666666655544432111 00 0111110 0 1
Q ss_pred ccccCCCcEEEEeCCCCCCCC--Cchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 YELFEDAEWALLIGAKPRGPG--MERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 ~eal~dADiViitag~~rk~g--~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+...|++|..+|.....+ .+.. +.+..|.. +.+.+.+.+. .+++.+|+++-
T Consensus 75 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~g~ii~isS 137 (261)
T PRK08265 75 VARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA---RGGGAIVNFTS 137 (261)
T ss_pred HHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh---cCCcEEEEECc
Confidence 122346799999887642221 2222 23444544 3344444443 24567777663
No 189
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.92 E-value=0.061 Score=49.75 Aligned_cols=46 Identities=26% Similarity=0.327 Sum_probs=34.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
+++|.|+||+|.+|..++..|+..|. .+.+ ++++.+.++....++.
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~-----~v~~----~~r~~~~~~~~~~~~~ 50 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGA-----KVVI----YDSNEEAAEALAAELR 50 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-----EEEE----EeCChhHHHHHHHHHH
Confidence 46899999999999999999998875 2433 3566666655555554
No 190
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.91 E-value=0.05 Score=55.31 Aligned_cols=73 Identities=12% Similarity=0.205 Sum_probs=41.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-cCcccccCCCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-INPYELFEDAE 174 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~~~~eal~dAD 174 (398)
|+||+|+||+|.+|..+...|+...-|.. ..+.++.. +...+..-++.. ....+. ..+.++++++|
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~---~~l~~~ss----~~sg~~~~~f~g------~~~~v~~~~~~~~~~~~D 67 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDL---IEPVFFST----SQAGGAAPSFGG------KEGTLQDAFDIDALKKLD 67 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCc---CcEEEecc----hhhCCcccccCC------CcceEEecCChhHhcCCC
Confidence 57999999999999999986666554432 12222321 111111111111 111222 23356789999
Q ss_pred EEEEeCC
Q 015897 175 WALLIGA 181 (398)
Q Consensus 175 iViitag 181 (398)
+|+++++
T Consensus 68 ivf~a~~ 74 (369)
T PRK06598 68 IIITCQG 74 (369)
T ss_pred EEEECCC
Confidence 9999765
No 191
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=95.91 E-value=0.039 Score=54.25 Aligned_cols=64 Identities=17% Similarity=0.214 Sum_probs=40.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccC---CC
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFE---DA 173 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~---dA 173 (398)
|||+||| .|.+|+.++..|+..+. ++.+ + |+++++++... +.. +....+..+.++ ++
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g~-----~v~v--~--dr~~~~~~~~~----~~g------~~~~~~~~e~~~~~~~~ 60 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGGH-----EVVG--Y--DRNPEAVEALA----EEG------ATGADSLEELVAKLPAP 60 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCCC-----eEEE--E--ECCHHHHHHHH----HCC------CeecCCHHHHHhhcCCC
Confidence 4899999 59999999999998764 3443 3 67766655332 111 222333334444 46
Q ss_pred cEEEEeC
Q 015897 174 EWALLIG 180 (398)
Q Consensus 174 DiViita 180 (398)
|+||++.
T Consensus 61 dvvi~~v 67 (301)
T PRK09599 61 RVVWLMV 67 (301)
T ss_pred CEEEEEe
Confidence 9988864
No 192
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=95.90 E-value=0.013 Score=57.47 Aligned_cols=65 Identities=17% Similarity=0.218 Sum_probs=45.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
|+||+||| .|.+|..++..|+..+. .+.+ + |++.++++.... .. .....+..+++++||+
T Consensus 1 m~~Ig~IG-lG~mG~~mA~~l~~~G~-----~V~v--~--d~~~~~~~~~~~----~g------~~~~~s~~~~~~~aDv 60 (296)
T PRK15461 1 MAAIAFIG-LGQMGSPMASNLLKQGH-----QLQV--F--DVNPQAVDALVD----KG------ATPAASPAQAAAGAEF 60 (296)
T ss_pred CCeEEEEe-eCHHHHHHHHHHHHCCC-----eEEE--E--cCCHHHHHHHHH----cC------CcccCCHHHHHhcCCE
Confidence 45899999 59999999999998874 2443 3 666666553321 11 1233456778899999
Q ss_pred EEEeC
Q 015897 176 ALLIG 180 (398)
Q Consensus 176 Viita 180 (398)
||++.
T Consensus 61 Vi~~v 65 (296)
T PRK15461 61 VITML 65 (296)
T ss_pred EEEec
Confidence 99864
No 193
>KOG2711 consensus Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase [Energy production and conversion]
Probab=95.88 E-value=0.13 Score=51.28 Aligned_cols=130 Identities=12% Similarity=0.162 Sum_probs=78.6
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcC----cCCCCCceEEEecccccch--hhHHHHHHHHhhhcCCC------cceEE
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGE----VLGPDQPIALKLLGSERSL--QALEGVAMELEDSLFPL------LREVK 161 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~----~~~~~~~i~L~L~d~D~~~--~~l~g~a~DL~d~~~~~------~~~v~ 161 (398)
+.+.||+||| +|+=|++++..+...- .|.. .|.+-.++...+. ++|...... .|....+ ..++.
T Consensus 19 ~~~~kV~ivG-sGnWGsaiaki~~~n~~~~~~f~~--~Vrmwv~ee~i~~~~~~L~eiIN~-~heN~KYlpg~~lP~Nvv 94 (372)
T KOG2711|consen 19 RDPLKVCIVG-SGNWGSAIAKIVGENVKEFPIFDP--QVRMWVFEEEINGEAEKLTEIINS-RHENVKYLPGIKLPENVV 94 (372)
T ss_pred cCceEEEEEc-cChHHHHHHHHHhhhhhhccccCc--eeeEEEeccccCChhHHHHHHhcc-ccccccccCCccCCCCeE
Confidence 4457999999 6999999998776542 2332 3555444433433 233322222 1111111 23577
Q ss_pred EecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC--------C-chhHHHHH
Q 015897 162 IGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN--------P-CNTNALIC 232 (398)
Q Consensus 162 i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN--------P-~d~~t~~~ 232 (398)
..+|..++.+|||++|+.-- -+.+..+++.|..+-.|++..|..+. | ..+++.++
T Consensus 95 Av~dl~ea~~dADilvf~vP----------------hQf~~~ic~~l~g~vk~~~~aISL~KG~e~~~~g~~i~liS~iI 158 (372)
T KOG2711|consen 95 AVPDLVEAAKDADILVFVVP----------------HQFIPRICEQLKGYVKPGATAISLIKGVEVGEEGPGIRLISQII 158 (372)
T ss_pred ecchHHHHhccCCEEEEeCC----------------hhhHHHHHHHHhcccCCCCeEEEeecceeccCCCCceeehHHHH
Confidence 77889999999999998742 25666677777776666666655432 2 34566777
Q ss_pred HHHCCCCCCceE
Q 015897 233 LKNAPSIPAKNF 244 (398)
Q Consensus 233 ~k~~~~~~~kvi 244 (398)
.+.. ++|..++
T Consensus 159 ~~~l-gI~~~vL 169 (372)
T KOG2711|consen 159 HRAL-GIPCSVL 169 (372)
T ss_pred HHHh-CCCceee
Confidence 6665 5654433
No 194
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.88 E-value=0.045 Score=55.22 Aligned_cols=76 Identities=25% Similarity=0.350 Sum_probs=46.1
Q ss_pred ccCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCC
Q 015897 93 WKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFED 172 (398)
Q Consensus 93 ~~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~d 172 (398)
..+.+||+|+||+|.+|..++..|....-|.- -.|.++..+.+. |....+. . .+..+..-+.+++++
T Consensus 2 ~~~~~~VaIvGATG~vG~ell~lL~~h~~f~v---~~l~~~aS~~sa----Gk~~~~~----~--~~l~v~~~~~~~~~~ 68 (347)
T PRK06728 2 SEKGYHVAVVGATGAVGQKIIELLEKETKFNI---AEVTLLSSKRSA----GKTVQFK----G--REIIIQEAKINSFEG 68 (347)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHHCCCCCc---ccEEEEECcccC----CCCeeeC----C--cceEEEeCCHHHhcC
Confidence 34557999999999999999998885554431 113334333221 1111111 1 134444345667899
Q ss_pred CcEEEEeCC
Q 015897 173 AEWALLIGA 181 (398)
Q Consensus 173 ADiViitag 181 (398)
+|+|+++.+
T Consensus 69 ~Divf~a~~ 77 (347)
T PRK06728 69 VDIAFFSAG 77 (347)
T ss_pred CCEEEECCC
Confidence 999999764
No 195
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.12 Score=50.28 Aligned_cols=117 Identities=12% Similarity=0.049 Sum_probs=65.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEec--Cc------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGI--NP------ 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~--~~------ 166 (398)
.++|.|+||+|.+|.+++..|+..|. .|.+ .+++.+.++....++....... .....+.. +.
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~-----~Vi~----~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~ 110 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGA-----TVVA----VARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVAD 110 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-----EEEE----EECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 35899999999999999999998874 2443 3677777776666554321000 00111110 00
Q ss_pred -ccccCCCcEEEEeCCCCC-CCCCc----h---hhhHHHHH----HHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 -YELFEDAEWALLIGAKPR-GPGME----R---AGLLDING----QIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 -~eal~dADiViitag~~r-k~g~~----r---~dll~~N~----~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+...|++|.++|... .+-.+ . ...+..|. .+.+.+.+.+.+. ..+.+|+++.
T Consensus 111 ~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~g~iv~isS 178 (293)
T PRK05866 111 VEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER--GDGHIINVAT 178 (293)
T ss_pred HHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcEEEEECC
Confidence 112447899999887542 11111 1 12344443 3455555566553 3566666664
No 196
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.12 Score=48.06 Aligned_cols=118 Identities=14% Similarity=0.020 Sum_probs=62.2
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ecC--c----
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GIN--P---- 166 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~~--~---- 166 (398)
.+.++|.|+||+|.+|++++..|+..|. .+.+ .. ..++..++....++.... .++.. ..| +
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~-----~v~~--~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~ 70 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGF-----AVAV--NY-AGSAAAADELVAEIEAAG----GRAIAVQADVADAAAV 70 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-----EEEE--ec-CCCHHHHHHHHHHHHhcC----CeEEEEECCCCCHHHH
Confidence 3456899999999999999999999875 2433 11 223333444444443221 11111 111 1
Q ss_pred ccc-------cCCCcEEEEeCCCCCC-C--CCc---hhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 YEL-------FEDAEWALLIGAKPRG-P--GME---RAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 ~ea-------l~dADiViitag~~rk-~--g~~---r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+. +...|+||..+|.... + ..+ -...+..|..-...+.+.+.+....++.+++++-
T Consensus 71 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss 140 (245)
T PRK12937 71 TRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST 140 (245)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence 122 3468999998875421 1 011 1233555544444444443332234567777763
No 197
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.84 E-value=0.098 Score=48.64 Aligned_cols=25 Identities=20% Similarity=0.444 Sum_probs=22.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
..||+|+|+ |.+|+.++..|+..|+
T Consensus 21 ~~~V~IvG~-GglGs~ia~~La~~Gv 45 (200)
T TIGR02354 21 QATVAICGL-GGLGSNVAINLARAGI 45 (200)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCC
Confidence 359999995 9999999999999987
No 198
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=95.83 E-value=0.027 Score=54.31 Aligned_cols=117 Identities=17% Similarity=0.136 Sum_probs=62.5
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec--CcccccCC--
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI--NPYELFED-- 172 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~--~~~eal~d-- 172 (398)
||.|+||+|++|.+++..|+..+.-. .|.+ ++.+......+ ...++.... ... ....+.. +..+++++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~---~v~~--~~~~~~~~~~~-~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~ 73 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDA---EVIV--LDKLTYAGNLE-NLADLEDNP-RYRFVKGDIGDRELVSRLFTEHQ 73 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCC---EEEE--ecCCCcchhhh-hhhhhccCC-CcEEEEcCCcCHHHHHHHHhhcC
Confidence 58999999999999999998765211 2332 22111111111 111221100 000 0001111 12344555
Q ss_pred CcEEEEeCCCCC--CCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 173 AEWALLIGAKPR--GPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 173 ADiViitag~~r--k~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
+|+||.+++... .....-..++..|..-...+++.+.+. ..+..++.+|
T Consensus 74 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~S 124 (317)
T TIGR01181 74 PDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY-WHEFRFHHIS 124 (317)
T ss_pred CCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEee
Confidence 899999887532 111223456778888888888888775 3455666655
No 199
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=95.82 E-value=0.028 Score=53.89 Aligned_cols=95 Identities=15% Similarity=0.203 Sum_probs=59.2
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCC--CcE
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFED--AEW 175 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~d--ADi 175 (398)
||.|+||+|++|++++..|+..|. .+.. +++. ..|+.+.. ...+++++ .|+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~-----~v~~----~~r~-------~~d~~~~~-----------~~~~~~~~~~~d~ 53 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR-----VVVA----LTSS-------QLDLTDPE-----------ALERLLRAIRPDA 53 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC-----EEEE----eCCc-------ccCCCCHH-----------HHHHHHHhCCCCE
Confidence 689999999999999999998764 2432 2332 11222111 12233343 499
Q ss_pred EEEeCCCCCCCC--CchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 176 ALLIGAKPRGPG--MERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 176 Viitag~~rk~g--~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
||.+++...... .....+...|......+++.+.+. + ..+|.+|
T Consensus 54 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~--~~~v~~S 99 (287)
T TIGR01214 54 VVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-G--ARLVHIS 99 (287)
T ss_pred EEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-C--CeEEEEe
Confidence 999887643221 234456778888888888888774 2 3555555
No 200
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.81 E-value=0.02 Score=54.25 Aligned_cols=28 Identities=25% Similarity=0.316 Sum_probs=24.6
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.+++||.|+||+|++|..++..|+..+.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~ 42 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGF 42 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCC
Confidence 4467999999999999999999998764
No 201
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.80 E-value=0.03 Score=54.04 Aligned_cols=100 Identities=23% Similarity=0.234 Sum_probs=59.9
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCC-cEE
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDA-EWA 176 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dA-DiV 176 (398)
+|.|+||+|+||++++..|+..|. .|.. +|+......... .+..+ ...++.-.....+.+++. |.|
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~-----~V~~----~~r~~~~~~~~~---~~~~~-~~~d~~~~~~~~~~~~~~~d~v 68 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGH-----DVRG----LDRLRDGLDPLL---SGVEF-VVLDLTDRDLVDELAKGVPDAV 68 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCC-----eEEE----EeCCCccccccc---cccce-eeecccchHHHHHHHhcCCCEE
Confidence 499999999999999999999754 2332 244332221111 00000 000110001223445555 999
Q ss_pred EEeCCCCCCCCCch---hhhHHHHHHHHHHHHHHHHH
Q 015897 177 LLIGAKPRGPGMER---AGLLDINGQIFAEQGKALNA 210 (398)
Q Consensus 177 iitag~~rk~g~~r---~dll~~N~~i~~~i~~~i~~ 210 (398)
|.+++....++..+ .++...|+.-...+.++..+
T Consensus 69 ih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~ 105 (314)
T COG0451 69 IHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARA 105 (314)
T ss_pred EEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 99987664444332 35788999999999999988
No 202
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.79 E-value=0.053 Score=54.49 Aligned_cols=74 Identities=20% Similarity=0.296 Sum_probs=43.0
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCC
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDA 173 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dA 173 (398)
.+|+||+|+||+|.+|..++..|..++.-. ..|.++-.. +.+ |.-..+.. .+..+...+.++++++
T Consensus 2 ~~~~~IaIvGATG~vG~eLlrlL~~~~hP~----~~l~~v~s~---~~a-G~~l~~~~------~~l~~~~~~~~~~~~v 67 (336)
T PRK05671 2 SQPLDIAVVGATGTVGEALVQILEERDFPV----GTLHLLASS---ESA-GHSVPFAG------KNLRVREVDSFDFSQV 67 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhhCCCCc----eEEEEEECc---ccC-CCeeccCC------cceEEeeCChHHhcCC
Confidence 456899999999999999999998654311 333333111 111 11111111 1233332233457899
Q ss_pred cEEEEeCC
Q 015897 174 EWALLIGA 181 (398)
Q Consensus 174 DiViitag 181 (398)
|+|+++.+
T Consensus 68 D~vFla~p 75 (336)
T PRK05671 68 QLAFFAAG 75 (336)
T ss_pred CEEEEcCC
Confidence 99999754
No 203
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=95.79 E-value=0.043 Score=55.35 Aligned_cols=73 Identities=22% Similarity=0.312 Sum_probs=43.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
..+||+|+||+|.+|..++..|..++.-. ..|.++..+++..+ ..+.. . .++.+..-+.+++.++|
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~----~~l~~las~rsaGk----~~~~~----~--~~~~v~~~~~~~~~~~D 71 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPY----SSLKMLASARSAGK----KVTFE----G--RDYTVEELTEDSFDGVD 71 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCc----ceEEEEEccCCCCC----eeeec----C--ceeEEEeCCHHHHcCCC
Confidence 45799999999999999999888754311 23332323332211 11111 1 23334333456789999
Q ss_pred EEEEeCC
Q 015897 175 WALLIGA 181 (398)
Q Consensus 175 iViitag 181 (398)
+||++.+
T Consensus 72 ~vf~a~p 78 (344)
T PLN02383 72 IALFSAG 78 (344)
T ss_pred EEEECCC
Confidence 9999765
No 204
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.79 E-value=0.073 Score=46.33 Aligned_cols=120 Identities=18% Similarity=0.171 Sum_probs=68.9
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHH-HhhhcCCCcc-e--EEEecCcc-cccCCC
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAME-LEDSLFPLLR-E--VKIGINPY-ELFEDA 173 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~D-L~d~~~~~~~-~--v~i~~~~~-eal~dA 173 (398)
|+|+|| |.+|..++..|.+.+. ++.+ +.+.. .++....+ +. ....... . .......+ +..+..
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~-----~V~l----~~r~~-~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGH-----DVTL----VSRSP-RLEAIKEQGLT-ITGPDGDETVQPPIVISAPSADAGPY 68 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTC-----EEEE----EESHH-HHHHHHHHCEE-EEETTEEEEEEEEEEESSHGHHHSTE
T ss_pred CEEECc-CHHHHHHHHHHHHCCC-----ceEE----EEccc-cHHhhhheeEE-EEecccceecccccccCcchhccCCC
Confidence 789995 9999999999988664 4655 24544 44432211 10 0001111 1 11112222 578899
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCCceEEecCc
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPAKNFHALTR 249 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~kvig~gt~ 249 (398)
|+||++.... -..+..+.++.+..++..|+.+-|=++..-.+. +..+. ++++++.+.
T Consensus 69 D~viv~vKa~----------------~~~~~l~~l~~~~~~~t~iv~~qNG~g~~~~l~-~~~~~--~~v~~g~~~ 125 (151)
T PF02558_consen 69 DLVIVAVKAY----------------QLEQALQSLKPYLDPNTTIVSLQNGMGNEEVLA-EYFPR--PRVLGGVTT 125 (151)
T ss_dssp SEEEE-SSGG----------------GHHHHHHHHCTGEETTEEEEEESSSSSHHHHHH-CHSTG--SGEEEEEEE
T ss_pred cEEEEEeccc----------------chHHHHHHHhhccCCCcEEEEEeCCCCcHHHHH-HHcCC--CcEEEEEEe
Confidence 9999985321 223455556777678889999999877664443 33322 266665544
No 205
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=95.78 E-value=0.07 Score=51.70 Aligned_cols=70 Identities=23% Similarity=0.372 Sum_probs=44.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
|+||+||| .|.+|..++..|...+. +- ++. .+ .|++.++++..+.++ .....++..+.+.++|+
T Consensus 1 mmrIgIIG-~G~iG~~ia~~l~~~~~-~~--elv-~v--~d~~~~~a~~~a~~~---------~~~~~~~~~ell~~~Dv 64 (265)
T PRK13304 1 MLKIGIVG-CGAIASLITKAILSGRI-NA--ELY-AF--YDRNLEKAENLASKT---------GAKACLSIDELVEDVDL 64 (265)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHcCCC-Ce--EEE-EE--ECCCHHHHHHHHHhc---------CCeeECCHHHHhcCCCE
Confidence 57999999 59999999998876542 10 122 22 366666655433321 11233444555589999
Q ss_pred EEEeCC
Q 015897 176 ALLIGA 181 (398)
Q Consensus 176 Viitag 181 (398)
|+++..
T Consensus 65 Vvi~a~ 70 (265)
T PRK13304 65 VVECAS 70 (265)
T ss_pred EEEcCC
Confidence 999864
No 206
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.78 E-value=0.042 Score=47.95 Aligned_cols=74 Identities=18% Similarity=0.200 Sum_probs=49.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
.++|+|+|+ |.+|..++..|...+. . .+.+ .|++.++++..+.++.... ... ...+..+.++++|+
T Consensus 19 ~~~i~iiG~-G~~g~~~a~~l~~~g~-~---~v~v----~~r~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~Dv 84 (155)
T cd01065 19 GKKVLILGA-GGAARAVAYALAELGA-A---KIVI----VNRTLEKAKALAERFGELG----IAI-AYLDLEELLAEADL 84 (155)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC-C---EEEE----EcCCHHHHHHHHHHHhhcc----cce-eecchhhccccCCE
Confidence 569999995 9999999999988762 2 2443 3677777776666554210 011 12345566899999
Q ss_pred EEEeCCCC
Q 015897 176 ALLIGAKP 183 (398)
Q Consensus 176 Viitag~~ 183 (398)
||++...+
T Consensus 85 vi~~~~~~ 92 (155)
T cd01065 85 IINTTPVG 92 (155)
T ss_pred EEeCcCCC
Confidence 99986543
No 207
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.037 Score=51.90 Aligned_cols=116 Identities=14% Similarity=0.158 Sum_probs=61.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--CcccccC--
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--NPYELFE-- 171 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~~~eal~-- 171 (398)
|.++.|+||+|.+|..++..|+..|. .+.+ .++++++++.......+.. .....++. +-.+.++
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~-----~V~~----~~r~~~~~~~~~~~~~~~~---~~~~D~~~~~~~~~~~~~~ 68 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGW-----QVIA----CGRNQSVLDELHTQSANIF---TLAFDVTDHPGTKAALSQL 68 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCC-----EEEE----EECCHHHHHHHHHhcCCCe---EEEeeCCCHHHHHHHHHhc
Confidence 35799999999999999999998775 2443 3667666654433211110 00111111 1111222
Q ss_pred --CCcEEEEeCCCCC-CC--CCch---hhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 172 --DAEWALLIGAKPR-GP--GMER---AGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 172 --dADiViitag~~r-k~--g~~r---~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.-|.+|..+|... .+ ..+. .+.+..|..-...+.+.+...-..++.+++++.
T Consensus 69 ~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS 128 (240)
T PRK06101 69 PFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGS 128 (240)
T ss_pred ccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEec
Confidence 2477777666431 11 1222 234666766555566555543223456666654
No 208
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.77 E-value=0.042 Score=50.30 Aligned_cols=75 Identities=19% Similarity=0.158 Sum_probs=50.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe--cC---ccccc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG--IN---PYELF 170 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~--~~---~~eal 170 (398)
.+|+.|+||+|.+|..++..|+..+. .+.+ .+++.++++..+.++.+.. .. .+... .+ ..+++
T Consensus 28 ~~~vlVlGgtG~iG~~~a~~l~~~g~-----~V~l----~~R~~~~~~~l~~~l~~~~-~~--~~~~~~~~~~~~~~~~~ 95 (194)
T cd01078 28 GKTAVVLGGTGPVGQRAAVLLAREGA-----RVVL----VGRDLERAQKAADSLRARF-GE--GVGAVETSDDAARAAAI 95 (194)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-----EEEE----EcCCHHHHHHHHHHHHhhc-CC--cEEEeeCCCHHHHHHHH
Confidence 46999999889999999999988653 2443 3677788877776664321 11 12211 11 24788
Q ss_pred CCCcEEEEeCCC
Q 015897 171 EDAEWALLIGAK 182 (398)
Q Consensus 171 ~dADiViitag~ 182 (398)
+++|+||.+...
T Consensus 96 ~~~diVi~at~~ 107 (194)
T cd01078 96 KGADVVFAAGAA 107 (194)
T ss_pred hcCCEEEECCCC
Confidence 999998887543
No 209
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.76 E-value=0.096 Score=49.32 Aligned_cols=115 Identities=14% Similarity=0.113 Sum_probs=64.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEecCcc-------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGINPY------- 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~~~~------- 167 (398)
.+++.|+||+|.+|.+++..|+..|. .+.+ .+++.+.++....++.+..... .....+ .++
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G~-----~vvl----~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl--~~~~~~~~~~ 77 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYGA-----EIII----NDITAERAELAVAKLRQEGIKAHAAPFNV--THKQEVEAAI 77 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC-----EEEE----EcCCHHHHHHHHHHHHhcCCeEEEEecCC--CCHHHHHHHH
Confidence 45899999999999999999998774 2444 3667677766666665432000 000111 112
Q ss_pred ----cccCCCcEEEEeCCCCC-CC--CCchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 168 ----ELFEDAEWALLIGAKPR-GP--GMERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 168 ----eal~dADiViitag~~r-k~--g~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+.+...|+||.++|... .+ ..+.. ..+..|.. +.+.+.+.+.+ ...+.+|+++.
T Consensus 78 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~isS 145 (254)
T PRK08085 78 EHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVK--RQAGKIINICS 145 (254)
T ss_pred HHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCcEEEEEcc
Confidence 22345799999887532 11 11222 23455533 34444444443 23466776664
No 210
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.76 E-value=0.21 Score=46.48 Aligned_cols=114 Identities=18% Similarity=0.166 Sum_probs=63.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-cC--cc-----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-IN--PY----- 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~~--~~----- 167 (398)
.+++.|+||+|.+|.+++..|+..|. .|.+ ++++.+.++....++.... .++.+. .| +.
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-----~Vi~----~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~ 73 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-----NVGL----LARTEENLKAVAEEVEAYG----VKVVIATADVSDYEEVTA 73 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHHhC----CeEEEEECCCCCHHHHHH
Confidence 35899999999999999999998875 2443 3566666655555554211 122211 11 11
Q ss_pred ------cccCCCcEEEEeCCCCCCCC---Cchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 168 ------ELFEDAEWALLIGAKPRGPG---MERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 168 ------eal~dADiViitag~~rk~g---~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
+.+.+.|+||.++|...... .+.. ..+..|.. +.+.+.+.+.+. ..+.+++++..
T Consensus 74 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~~ss~ 144 (239)
T PRK07666 74 AIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER--QSGDIINISST 144 (239)
T ss_pred HHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCcEEEEEcch
Confidence 12347899999887643211 1111 23444443 344444444442 34566666654
No 211
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.12 Score=50.37 Aligned_cols=115 Identities=16% Similarity=0.131 Sum_probs=65.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ecC--cc-----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GIN--PY----- 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~~--~~----- 167 (398)
.++|.|+||+|.||.+++..|+..|. .+.+ .+++.+.++....++.... +. .++.+ ..| +.
T Consensus 16 ~k~vlItGas~gIG~~~a~~l~~~G~-----~vi~----~~r~~~~~~~~~~~l~~~~-~~-~~~~~~~~Dl~d~~~v~~ 84 (306)
T PRK06197 16 GRVAVVTGANTGLGYETAAALAAKGA-----HVVL----AVRNLDKGKAAAARITAAT-PG-ADVTLQELDLTSLASVRA 84 (306)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHHhC-CC-CceEEEECCCCCHHHHHH
Confidence 46899999999999999999998874 2443 2556666655555554221 10 11111 111 11
Q ss_pred ------cccCCCcEEEEeCCCCCCCC-Cch---hhhHHHHH----HHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 168 ------ELFEDAEWALLIGAKPRGPG-MER---AGLLDING----QIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 168 ------eal~dADiViitag~~rk~g-~~r---~dll~~N~----~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+.+...|++|..+|....+. .+. ...+..|. .+...+.+.+.+. ..+.||+++-
T Consensus 85 ~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~--~~~~iV~vSS 152 (306)
T PRK06197 85 AADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV--PGSRVVTVSS 152 (306)
T ss_pred HHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC--CCCEEEEECC
Confidence 12346899999887532111 111 12234443 3466666666663 4567777764
No 212
>PRK05717 oxidoreductase; Validated
Probab=95.73 E-value=0.028 Score=53.13 Aligned_cols=117 Identities=15% Similarity=0.035 Sum_probs=60.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--C-------c
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--N-------P 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~-------~ 166 (398)
.++|.|+||+|.+|.+++..|+..|. .+.+ .|++.++++....++.... ......++. + -
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g~-----~v~~----~~~~~~~~~~~~~~~~~~~--~~~~~Dl~~~~~~~~~~~~~ 78 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEGW-----QVVL----ADLDRERGSKVAKALGENA--WFIAMDVADEAQVAAGVAEV 78 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCC-----EEEE----EcCCHHHHHHHHHHcCCce--EEEEccCCCHHHHHHHHHHH
Confidence 45899999999999999999998774 2443 2555444443333321110 000111111 0 0
Q ss_pred ccccCCCcEEEEeCCCCCC---C--CCch---hhhHHHHHHHHHHHHHHHHHhc-CCCeEEEEECC
Q 015897 167 YELFEDAEWALLIGAKPRG---P--GMER---AGLLDINGQIFAEQGKALNAVA-SRNVKVIVVGN 223 (398)
Q Consensus 167 ~eal~dADiViitag~~rk---~--g~~r---~dll~~N~~i~~~i~~~i~~~a-~p~a~vIvvtN 223 (398)
.+.+...|++|..+|.... + ..+. ...+..|..-...+.+.+.++- ...+.+|+++-
T Consensus 79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS 144 (255)
T PRK05717 79 LGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLAS 144 (255)
T ss_pred HHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcc
Confidence 1112357999999886532 1 1122 2345566554444444443210 13466777764
No 213
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.21 Score=47.64 Aligned_cols=119 Identities=16% Similarity=0.150 Sum_probs=65.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc--ceEEEec---------C
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL--REVKIGI---------N 165 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~--~~v~i~~---------~ 165 (398)
+++.|+||+|.+|..++..|+..|. .+.+ ++++.+.++....++........ ....++. .
T Consensus 1 k~vlItGas~giG~~la~~la~~G~-----~vv~----~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 71 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA-----ELFL----TDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAAD 71 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHH
Confidence 3789999999999999999998774 2443 35666666666666553211100 0111110 0
Q ss_pred cccccCCCcEEEEeCCCCCC-C--CCchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECCCc
Q 015897 166 PYELFEDAEWALLIGAKPRG-P--GMERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGNPC 225 (398)
Q Consensus 166 ~~eal~dADiViitag~~rk-~--g~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtNP~ 225 (398)
..+.+...|+||..+|.... + ..+.. ..+..|.. +.+.+.+.+.+. ...+.+|+++-..
T Consensus 72 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~g~ii~isS~~ 140 (272)
T PRK07832 72 IHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAA-GRGGHLVNVSSAA 140 (272)
T ss_pred HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCcEEEEEcccc
Confidence 11234568999998876421 1 11221 23445544 333444444442 2456777777543
No 214
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.72 E-value=0.055 Score=51.08 Aligned_cols=116 Identities=15% Similarity=0.088 Sum_probs=63.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--C-------c
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--N-------P 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~-------~ 166 (398)
.+++.|+||+|.+|.+++..|+..|. .+.+ .+++.+.++....++.... .. ....++. + -
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~~~~~-~~-~~~D~~~~~~~~~~~~~~ 74 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-----RVVI----ADIKPARARLAALEIGPAA-IA-VSLDVTRQDSIDRIVAAA 74 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-----EEEE----EcCCHHHHHHHHHHhCCce-EE-EEccCCCHHHHHHHHHHH
Confidence 35799999999999999999999875 2443 3667676665555543211 00 0111110 0 1
Q ss_pred ccccCCCcEEEEeCCCCC-CCC--Cch---hhhHHHHHHHHHHHHH----HHHHhcCCCeEEEEECC
Q 015897 167 YELFEDAEWALLIGAKPR-GPG--MER---AGLLDINGQIFAEQGK----ALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 ~eal~dADiViitag~~r-k~g--~~r---~dll~~N~~i~~~i~~----~i~~~a~p~a~vIvvtN 223 (398)
.+.+...|++|.++|... .+- .+. ...+..|..-...+.+ .+.+. ..++.+++++-
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~iv~~sS 140 (257)
T PRK07067 75 VERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQ-GRGGKIINMAS 140 (257)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhc-CCCcEEEEeCC
Confidence 122346899999887542 111 111 2235555443333333 33332 24567777765
No 215
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.65 E-value=0.13 Score=48.26 Aligned_cols=111 Identities=13% Similarity=0.145 Sum_probs=62.8
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ecC--cccc-----
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GIN--PYEL----- 169 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~~--~~ea----- 169 (398)
++.|+||+|.+|.+++..|+..|. .+.+ ++++.+.++....++.+.. .++.. ..| +.+.
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~-----~v~~----~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dl~~~~~i~~~~ 68 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF-----AVAV----ADLNEETAKETAKEINQAG----GKAVAYKLDVSDKDQVFSAI 68 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhcC----CeEEEEEcCCCCHHHHHHHH
Confidence 689999999999999999998875 2443 2555566655555554321 11111 111 2222
Q ss_pred ------cCCCcEEEEeCCCCC-CC--CCchhh---hHHHHH----HHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 170 ------FEDAEWALLIGAKPR-GP--GMERAG---LLDING----QIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 170 ------l~dADiViitag~~r-k~--g~~r~d---ll~~N~----~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
+...|+||.++|... .+ ..+..+ .+..|. .+++.+.+.+.+. +.++.+++++
T Consensus 69 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~~iv~~s 136 (254)
T TIGR02415 69 DQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQ-GHGGKIINAA 136 (254)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC-CCCeEEEEec
Confidence 235699999887532 11 222222 244443 3445555666654 3456776665
No 216
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.65 E-value=0.16 Score=49.95 Aligned_cols=118 Identities=14% Similarity=0.079 Sum_probs=64.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec--Cccccc--
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI--NPYELF-- 170 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~--~~~eal-- 170 (398)
.++|.|+||+|.||.+++..|+..|. .|.+ .+++.++++....++........ ....++. ...+.+
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G~-----~V~~----~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 76 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRGW-----HVIM----ACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDD 76 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCCC-----EEEE----EECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHH
Confidence 46899999999999999999998874 2443 36677777666666532110000 0111110 001111
Q ss_pred -----CCCcEEEEeCCCCCC----CCCch---hhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEEC
Q 015897 171 -----EDAEWALLIGAKPRG----PGMER---AGLLDINGQ----IFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 171 -----~dADiViitag~~rk----~g~~r---~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
...|++|..+|.... +..+. ...+..|.- +.+.+.+.+.+.....+.||+++
T Consensus 77 ~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vs 144 (322)
T PRK07453 77 FRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILG 144 (322)
T ss_pred HHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEc
Confidence 248999998885321 11222 223455543 45555666665311125666665
No 217
>PRK09186 flagellin modification protein A; Provisional
Probab=95.65 E-value=0.19 Score=47.19 Aligned_cols=46 Identities=20% Similarity=0.254 Sum_probs=34.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
.++|.|+||+|.+|.+++..|+..|. .+.+ .+++.+.++....++.
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g~-----~v~~----~~r~~~~~~~~~~~l~ 49 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAGG-----IVIA----ADIDKEALNELLESLG 49 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-----EEEE----EecChHHHHHHHHHHH
Confidence 46899999999999999999998875 2443 2566677766666653
No 218
>PRK07069 short chain dehydrogenase; Validated
Probab=95.65 E-value=0.2 Score=46.75 Aligned_cols=116 Identities=12% Similarity=0.078 Sum_probs=66.1
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccc-hhhHHHHHHHHhhhcCCCc---ceEEEecC--------
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERS-LQALEGVAMELEDSLFPLL---REVKIGIN-------- 165 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~-~~~l~g~a~DL~d~~~~~~---~~v~i~~~-------- 165 (398)
||.|+||+|.+|.+++..|+..|. .+.+ . +++ .+.++....++.+...... ....++..
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~-----~v~~--~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 71 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA-----KVFL--T--DINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLA 71 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC-----EEEE--E--eCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHH
Confidence 588999999999999999998774 2443 2 444 4556555555543210100 01111110
Q ss_pred -cccccCCCcEEEEeCCCCCC-C--CCc---hhhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 166 -PYELFEDAEWALLIGAKPRG-P--GME---RAGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 166 -~~eal~dADiViitag~~rk-~--g~~---r~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
-.+.+...|+||..+|.... + ..+ -...+..|+. ..+.+.+.+.+. ..+.+|+++..
T Consensus 72 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~ii~~ss~ 139 (251)
T PRK07069 72 QAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS--QPASIVNISSV 139 (251)
T ss_pred HHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc--CCcEEEEecCh
Confidence 01224568999998876431 1 111 1234566665 667777777764 34667776643
No 219
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.17 Score=50.39 Aligned_cols=115 Identities=14% Similarity=0.106 Sum_probs=66.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEecCccc------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGINPYE------ 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~~~~e------ 168 (398)
.++|.|+||+|.+|..++..|+..|. .|.+ .+++++.++....++........ ....+ .+.+
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~-----~Vvl----~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv--~d~~~v~~~~ 76 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGA-----KVVL----LARGEEGLEALAAEIRAAGGEALAVVADV--ADAEAVQAAA 76 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-----EEEE----EECCHHHHHHHHHHHHHcCCcEEEEEecC--CCHHHHHHHH
Confidence 35899999999999999999998875 2443 36777777766666653221100 01111 1222
Q ss_pred -----ccCCCcEEEEeCCCCC-CC-C-Cchh---hhHHHH----HHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 169 -----LFEDAEWALLIGAKPR-GP-G-MERA---GLLDIN----GQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 169 -----al~dADiViitag~~r-k~-g-~~r~---dll~~N----~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+...|++|..+|... .+ . .+.. ..+..| ....+.+.+.+.+. ..+.+|+++-
T Consensus 77 ~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~--~~g~iV~isS 144 (334)
T PRK07109 77 DRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR--DRGAIIQVGS 144 (334)
T ss_pred HHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEeCC
Confidence 2346799999887542 11 1 1111 123333 34455666666653 3567777664
No 220
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.15 Score=48.09 Aligned_cols=74 Identities=22% Similarity=0.215 Sum_probs=46.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec-C--ccc-----
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI-N--PYE----- 168 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~-~--~~e----- 168 (398)
++|.|+||+|.+|.+++..|+..+. .+.+ ++++.+.++....++.... . .+.+.. | +++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-----~Vi~----~~r~~~~~~~~~~~l~~~~-~---~~~~~~~Dl~~~~~~~~~ 68 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-----QLVL----AARNETRLASLAQELADHG-G---EALVVPTDVSDAEACERL 68 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhcC-C---cEEEEEccCCCHHHHHHH
Confidence 5799999999999999999998774 2443 3566666665555554322 1 222111 1 222
Q ss_pred ------ccCCCcEEEEeCCCC
Q 015897 169 ------LFEDAEWALLIGAKP 183 (398)
Q Consensus 169 ------al~dADiViitag~~ 183 (398)
.+...|+||.++|..
T Consensus 69 ~~~~~~~~~~id~vi~~ag~~ 89 (263)
T PRK06181 69 IEAAVARFGGIDILVNNAGIT 89 (263)
T ss_pred HHHHHHHcCCCCEEEECCCcc
Confidence 123679999988754
No 221
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.12 Score=48.99 Aligned_cols=113 Identities=19% Similarity=0.121 Sum_probs=63.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ec--Cccc----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GI--NPYE---- 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~--~~~e---- 168 (398)
..+|.|+||+|.+|..++..|+..|. .|.+ .+++++.++....++.... ++.. .. .+.+
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~~~~-----~~~~~~~D~~d~~~~~~ 70 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAAGA-----RLLL----VGRNAEKLEALAARLPYPG-----RHRWVVADLTSEAGREA 70 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-----EEEE----EECCHHHHHHHHHHHhcCC-----ceEEEEccCCCHHHHHH
Confidence 46899999999999999999998874 2443 3667666665554442111 1111 11 1111
Q ss_pred ------ccCCCcEEEEeCCCCCCCCC---ch---hhhHHHHHHH----HHHHHHHHHHhcCCCeEEEEECCC
Q 015897 169 ------LFEDAEWALLIGAKPRGPGM---ER---AGLLDINGQI----FAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 169 ------al~dADiViitag~~rk~g~---~r---~dll~~N~~i----~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
.+...|++|.++|....... +. .+.+..|..- .+.+.+.+.+ ...+.+++++.-
T Consensus 71 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~--~~~~~iv~isS~ 140 (263)
T PRK09072 71 VLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRA--QPSAMVVNVGST 140 (263)
T ss_pred HHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh--cCCCEEEEecCh
Confidence 13568999999886532111 11 2234455433 3333344443 234666766653
No 222
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=95.61 E-value=0.038 Score=55.34 Aligned_cols=90 Identities=13% Similarity=0.104 Sum_probs=54.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
+||+||| .|.+|..++..|...|. .|.. + |++.+... +. .....+..+.+++||+|
T Consensus 147 ~~VgIIG-~G~IG~~vA~~L~~~G~-----~V~~--~--d~~~~~~~----~~----------~~~~~~l~ell~~aDiV 202 (330)
T PRK12480 147 MTVAIIG-TGRIGAATAKIYAGFGA-----TITA--Y--DAYPNKDL----DF----------LTYKDSVKEAIKDADII 202 (330)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-----EEEE--E--eCChhHhh----hh----------hhccCCHHHHHhcCCEE
Confidence 5899999 59999999999887654 2432 3 55433211 10 01223567889999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
+++.... . .+..++. .+.+... .+++++|+++==
T Consensus 203 il~lP~t-----~------~t~~li~--~~~l~~m-k~gavlIN~aRG 236 (330)
T PRK12480 203 SLHVPAN-----K------ESYHLFD--KAMFDHV-KKGAILVNAARG 236 (330)
T ss_pred EEeCCCc-----H------HHHHHHh--HHHHhcC-CCCcEEEEcCCc
Confidence 9875321 0 1112221 1233333 689999998854
No 223
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.05 Score=51.99 Aligned_cols=114 Identities=13% Similarity=0.071 Sum_probs=59.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecC---------cc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGIN---------PY 167 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~---------~~ 167 (398)
++|.|+||+|++|++++..|+..|. .+.+ .+++.+.++.....+.... .. ....++.. ..
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-----~v~~----~~r~~~~~~~~~~~~~~~~-~~-~~~D~~~~~~~~~~~~~~~ 71 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-----RVAA----TVRRPDALDDLKARYGDRL-WV-LQLDVTDSAAVRAVVDRAF 71 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHhccCce-EE-EEccCCCHHHHHHHHHHHH
Confidence 4799999999999999999998874 2433 2455554443222211100 00 01111110 01
Q ss_pred cccCCCcEEEEeCCCCCC-CCC--ch---hhhHHHHHHHHHHHHHH----HHHhcCCCeEEEEECC
Q 015897 168 ELFEDAEWALLIGAKPRG-PGM--ER---AGLLDINGQIFAEQGKA----LNAVASRNVKVIVVGN 223 (398)
Q Consensus 168 eal~dADiViitag~~rk-~g~--~r---~dll~~N~~i~~~i~~~----i~~~a~p~a~vIvvtN 223 (398)
+.+...|+||.++|.... +.. +. ...+..|..-...+.+. +++. ..+.+|+++-
T Consensus 72 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~iv~~sS 135 (276)
T PRK06482 72 AALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ--GGGRIVQVSS 135 (276)
T ss_pred HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCEEEEEcC
Confidence 123467999999886532 211 11 23455565544444444 4442 3456666653
No 224
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.22 Score=46.95 Aligned_cols=116 Identities=18% Similarity=0.147 Sum_probs=64.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcc--------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPY-------- 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~-------- 167 (398)
.+++.|+||+|.+|.+++..|+..|. .|.+ .+++.+.++..+.++.+.. .....+..-..++
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~-----~V~~----~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~ 78 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGA-----QVAI----AARHLDALEKLADEIGTSG-GKVVPVCCDVSQHQQVTSMLD 78 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-----EEEE----EcCCHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHH
Confidence 35899999999999999999998875 2444 3567677776666665422 1000011101111
Q ss_pred ---cccCCCcEEEEeCCCCC-CC--CCchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEEC
Q 015897 168 ---ELFEDAEWALLIGAKPR-GP--GMERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 168 ---eal~dADiViitag~~r-k~--g~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
+.+...|++|..+|... .+ ..+.. ..+..|.. +.+.+.+.+.+. ..++.+++++
T Consensus 79 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~g~iv~~s 145 (253)
T PRK05867 79 QVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQ-GQGGVIINTA 145 (253)
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhc-CCCcEEEEEC
Confidence 22357899999887642 11 11222 23444443 344444555443 2346666665
No 225
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.60 E-value=0.22 Score=50.87 Aligned_cols=115 Identities=17% Similarity=0.141 Sum_probs=60.5
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHH--HHHHHhhhcCCCcc--eEEEe--cCcc
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEG--VAMELEDSLFPLLR--EVKIG--INPY 167 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g--~a~DL~d~~~~~~~--~v~i~--~~~~ 167 (398)
.+++||.|+||+|++|++++..|+..|. .|.+ ++++...+.. ...++.... +... ...++ ....
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~-----~V~~----l~R~~~~~~~~~~~~~~~~~~-~~v~~v~~Dl~d~~~l~ 127 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGY-----NVVA----VAREKSGIRGKNGKEDTKKEL-PGAEVVFGDVTDADSLR 127 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-----EEEE----EEechhhccccchhhHHhhhc-CCceEEEeeCCCHHHHH
Confidence 3457999999999999999999998774 2433 2444333211 011111100 1000 11111 1122
Q ss_pred cccC----CCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 168 ELFE----DAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 168 eal~----dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+.++ ++|+||.+++.+.. + ..+....|.+....+.+.+++. +- ..+|.++.
T Consensus 128 ~~~~~~~~~~D~Vi~~aa~~~~-~--~~~~~~vn~~~~~~ll~aa~~~-gv-~r~V~iSS 182 (390)
T PLN02657 128 KVLFSEGDPVDVVVSCLASRTG-G--VKDSWKIDYQATKNSLDAGREV-GA-KHFVLLSA 182 (390)
T ss_pred HHHHHhCCCCcEEEECCccCCC-C--CccchhhHHHHHHHHHHHHHHc-CC-CEEEEEee
Confidence 3344 58999987664321 1 1123445666667777777764 22 34555553
No 226
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=95.60 E-value=0.04 Score=56.08 Aligned_cols=79 Identities=11% Similarity=0.162 Sum_probs=50.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
++||+||||.|.+|..++..|...|. +|.+ + |++.. .+..+.+++||+
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~-----~V~~--~--d~~~~-----------------------~~~~~~~~~aDl 145 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGY-----QVRI--L--EQDDW-----------------------DRAEDILADAGM 145 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCC-----eEEE--e--CCCcc-----------------------hhHHHHHhcCCE
Confidence 47999999679999999999998874 2443 4 43210 122456789999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
||++... ....++.+.+... .|+++|+-+|-
T Consensus 146 VilavP~----------------~~~~~~~~~l~~l-~~~~iv~Dv~S 176 (374)
T PRK11199 146 VIVSVPI----------------HLTEEVIARLPPL-PEDCILVDLTS 176 (374)
T ss_pred EEEeCcH----------------HHHHHHHHHHhCC-CCCcEEEECCC
Confidence 9998531 1223333444443 57777766654
No 227
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.11 Score=49.16 Aligned_cols=44 Identities=25% Similarity=0.347 Sum_probs=33.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHH
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMEL 149 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL 149 (398)
++|.|+||+|.+|..++..|+..|. .+.+ .+++.+.++....++
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~ 46 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQGA-----TLGL----VARRTDALQAFAARL 46 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHhc
Confidence 5899999999999999999998874 2443 366666666555544
No 228
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.25 Score=46.37 Aligned_cols=116 Identities=18% Similarity=0.115 Sum_probs=64.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcc--------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPY-------- 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~-------- 167 (398)
.++|.|+||+|.+|.+++..|+..|. .|.+ ++++.+.++....++.+.. .....+..-..+.
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~-----~Vi~----~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~ 77 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGA-----HVIV----SSRKLDGCQAVADAIVAAG-GKAEALACHIGEMEQIDALFA 77 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHH
Confidence 35899999999999999999998874 2443 3667677766666665432 1000111111111
Q ss_pred ---cccCCCcEEEEeCCCC--CCC--CCchh---hhHHHHHHH----HHHHHHHHHHhcCCCeEEEEECC
Q 015897 168 ---ELFEDAEWALLIGAKP--RGP--GMERA---GLLDINGQI----FAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 168 ---eal~dADiViitag~~--rk~--g~~r~---dll~~N~~i----~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+.+...|++|..+|.- ..+ ..+.. ..+..|..- .+.+.+.+.+. ..+.+++++-
T Consensus 78 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~~sS 145 (252)
T PRK07035 78 HIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ--GGGSIVNVAS 145 (252)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC--CCcEEEEECc
Confidence 1234579999887642 122 12222 234445333 34444454442 4567777764
No 229
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.57 E-value=0.19 Score=47.36 Aligned_cols=116 Identities=13% Similarity=0.123 Sum_probs=65.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEE-Eec--Cccc-----
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVK-IGI--NPYE----- 168 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~-i~~--~~~e----- 168 (398)
++|.|+||+|.+|.+++..|+..|. .+.+ +|++.+.++....++.... +. .++. +.. .+.+
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~-----~vi~----~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~i~~~ 71 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGY-----RVAV----ADINSEKAANVAQEINAEY-GE-GMAYGFGADATSEQSVLAL 71 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-----EEEE----EECCHHHHHHHHHHHHHhc-CC-ceeEEEEccCCCHHHHHHH
Confidence 3799999999999999999998874 2443 3666666655555554321 10 0111 111 1111
Q ss_pred ------ccCCCcEEEEeCCCCCCCC---Cchhh---hHHHHHH----HHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 169 ------LFEDAEWALLIGAKPRGPG---MERAG---LLDINGQ----IFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 169 ------al~dADiViitag~~rk~g---~~r~d---ll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
.+...|+||.++|.+.... .+..+ .+..|+. +.+.+.+.+.+. ++++.+|+++..
T Consensus 72 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~~iv~~ss~ 142 (259)
T PRK12384 72 SRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRD-GIQGRIIQINSK 142 (259)
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhC-CCCcEEEEecCc
Confidence 1246799999988653211 12222 2333432 355666666553 335777777764
No 230
>PRK06128 oxidoreductase; Provisional
Probab=95.56 E-value=0.15 Score=49.59 Aligned_cols=121 Identities=13% Similarity=-0.003 Sum_probs=64.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec--C-------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI--N------- 165 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~--~------- 165 (398)
.++|.|+||+|.+|.+++..|+..|. .+.+ ...+.+...++.....++....... ....++. .
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~-----~V~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 127 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGA-----DIAL--NYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVER 127 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCC-----EEEE--EeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHH
Confidence 35899999999999999999998875 2443 2222222233333444433210000 0011110 0
Q ss_pred cccccCCCcEEEEeCCCCC--CC--CCch---hhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 166 PYELFEDAEWALLIGAKPR--GP--GMER---AGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 166 ~~eal~dADiViitag~~r--k~--g~~r---~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
..+.+...|++|..+|... .+ ..+. ...+..|+.-...+.+.+..+...++.||+++.
T Consensus 128 ~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS 192 (300)
T PRK06128 128 AVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS 192 (300)
T ss_pred HHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence 1223456899999988642 22 1122 234666766555555555543234567777764
No 231
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=95.56 E-value=0.047 Score=54.53 Aligned_cols=75 Identities=21% Similarity=0.171 Sum_probs=53.1
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCC
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDA 173 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dA 173 (398)
+...+++||| +|..|...+..+....-+. .|.+ + |++.++++..+.++.+. ..++....+..+++++|
T Consensus 126 ~~~~~lgiiG-~G~qA~~~l~al~~~~~~~---~v~V--~--~r~~~~~~~~~~~~~~~----g~~v~~~~~~~eav~~a 193 (325)
T TIGR02371 126 KDSSVLGIIG-AGRQAWTQLEALSRVFDLE---EVSV--Y--CRTPSTREKFALRASDY----EVPVRAATDPREAVEGC 193 (325)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhcCCCC---EEEE--E--CCCHHHHHHHHHHHHhh----CCcEEEeCCHHHHhccC
Confidence 3457999999 5999998776665532222 3544 3 78888888888777632 12456667888999999
Q ss_pred cEEEEeC
Q 015897 174 EWALLIG 180 (398)
Q Consensus 174 DiViita 180 (398)
|+|+++-
T Consensus 194 DiVitaT 200 (325)
T TIGR02371 194 DILVTTT 200 (325)
T ss_pred CEEEEec
Confidence 9999753
No 232
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=95.56 E-value=0.015 Score=53.67 Aligned_cols=109 Identities=16% Similarity=0.113 Sum_probs=64.8
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHH-HHhhhcCCCcceEEEe--cCcccccCCC--
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAM-ELEDSLFPLLREVKIG--INPYELFEDA-- 173 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~-DL~d~~~~~~~~v~i~--~~~~eal~dA-- 173 (398)
|.|+||+|++|++++..|+..+. .+ +.+.. ..+ +....... ++... ...+. ....+.+++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-----~v-~~~~~-~~~-~~~~~~~~~~~~~~------~~dl~~~~~~~~~~~~~~~ 66 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-----EV-IVLSR-SSN-SESFEEKKLNVEFV------IGDLTDKEQLEKLLEKANI 66 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-----EE-EEEES-CST-GGHHHHHHTTEEEE------ESETTSHHHHHHHHHHHTE
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-----cc-ccccc-ccc-ccccccccceEEEE------EeeccccccccccccccCc
Confidence 78999999999999999999885 22 22222 111 11111110 11100 01111 1233555555
Q ss_pred cEEEEeCCCCC--CCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 174 EWALLIGAKPR--GPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 174 DiViitag~~r--k~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
|.||.+++... .....-.+....|......+.+.+.+. .. .++|.++-
T Consensus 67 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~~i~~sS 116 (236)
T PF01370_consen 67 DVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GV-KRFIFLSS 116 (236)
T ss_dssp SEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TT-SEEEEEEE
T ss_pred eEEEEeeccccccccccccccccccccccccccccccccc-cc-cccccccc
Confidence 99999987643 011244577888999999999999986 33 56666653
No 233
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.31 Score=45.84 Aligned_cols=114 Identities=14% Similarity=0.137 Sum_probs=63.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEecCccc-------
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGINPYE------- 168 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~~~~e------- 168 (398)
+++.|+||+|.+|.+++..|+..|. .|.+ .+++.+.++....++....... .....++ +.+
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~-----~Vi~----~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~ 70 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGA-----NVVI----TGRTKEKLEEAKLEIEQFPGQVLTVQMDVR--NPEDVQKMVE 70 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhcCCcEEEEEecCC--CHHHHHHHHH
Confidence 4789999999999999999998775 2433 3566666665655554321000 0011111 111
Q ss_pred ----ccCCCcEEEEeCCCCC-CC--CCchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEEC
Q 015897 169 ----LFEDAEWALLIGAKPR-GP--GMERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 169 ----al~dADiViitag~~r-k~--g~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
.+...|++|..+|... .+ ..+.. ..+..|.. +.+.+.+.+.+. ...+.+|+++
T Consensus 71 ~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~ii~is 137 (252)
T PRK07677 71 QIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEK-GIKGNIINMV 137 (252)
T ss_pred HHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCCEEEEEEc
Confidence 2346799999877432 12 22222 23455543 344444444442 2457788777
No 234
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.17 Score=47.50 Aligned_cols=47 Identities=15% Similarity=0.150 Sum_probs=35.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELED 151 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d 151 (398)
.++|.|+||+|.+|..++..|+..|. .+.+ ++++.+.++....++.+
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~~~ 53 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAREGA-----KVVV----ADRDAAGGEETVALIRE 53 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-----EEEE----EeCCHHHHHHHHHHHHh
Confidence 46899999999999999999998774 2443 36676666655555543
No 235
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.3 Score=45.89 Aligned_cols=47 Identities=19% Similarity=0.145 Sum_probs=32.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
.+++.|+||+|.+|.+++..|+..|. .+.+ .+ ..+.+.++..+.++.
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~-----~v~~--~~-~~~~~~~~~~~~~~~ 50 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGA-----LVAI--HY-GNRKEEAEETVYEIQ 50 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-----eEEE--Ec-CCCHHHHHHHHHHHH
Confidence 45899999999999999999998874 2443 21 234455555555554
No 236
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.51 E-value=0.25 Score=48.95 Aligned_cols=116 Identities=16% Similarity=0.135 Sum_probs=67.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc----ceEEEecCcc----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL----REVKIGINPY---- 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~----~~v~i~~~~~---- 167 (398)
...+.|+||+|.+|.+++..|+..|. .|.+ .++++++++..+.+++... +.. ..+.+..+..
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~-----~Vil----~~R~~~~l~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~~~~~ 122 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGL-----NLVL----VARNPDKLKDVSDSIQSKY-SKTQIKTVVVDFSGDIDEGVK 122 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-----CEEE----EECCHHHHHHHHHHHHHHC-CCcEEEEEEEECCCCcHHHHH
Confidence 45899999999999999999999875 2554 3788888888888776421 110 0112221111
Q ss_pred ---cccC--CCcEEEEeCCCCCC---C--CCch---hhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 168 ---ELFE--DAEWALLIGAKPRG---P--GMER---AGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 168 ---eal~--dADiViitag~~rk---~--g~~r---~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+.+. |.|++|..+|.... + ..+. .+.+..|.. +.+.+.+.+.+. ..+.||+++-
T Consensus 123 ~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~~g~IV~iSS 193 (320)
T PLN02780 123 RIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR--KKGAIINIGS 193 (320)
T ss_pred HHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc--CCcEEEEEec
Confidence 2223 45588888876421 1 1111 234555544 344455555553 4566666653
No 237
>PRK06182 short chain dehydrogenase; Validated
Probab=95.51 E-value=0.056 Score=51.61 Aligned_cols=112 Identities=14% Similarity=0.066 Sum_probs=61.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--Cccc-----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--NPYE----- 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~~~e----- 168 (398)
.++|.|+||+|.+|.+++..|+..|. .|.+ .+++.++++....+ .. .. ....++. +-.+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~-----~V~~----~~r~~~~l~~~~~~---~~-~~-~~~Dv~~~~~~~~~~~~~ 68 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGY-----TVYG----AARRVDKMEDLASL---GV-HP-LSLDVTDEASIKAAVDTI 68 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHhC---CC-eE-EEeeCCCHHHHHHHHHHH
Confidence 46899999999999999999998774 2433 35666655432211 01 00 0111211 1111
Q ss_pred --ccCCCcEEEEeCCCCC-CC--CC---chhhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 169 --LFEDAEWALLIGAKPR-GP--GM---ERAGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 169 --al~dADiViitag~~r-k~--g~---~r~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+.|++|..+|... .+ .. +-...+..|.. +.+.+.+.+++. ..+.+|+++.
T Consensus 69 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~--~~g~iv~isS 133 (273)
T PRK06182 69 IAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ--RSGRIINISS 133 (273)
T ss_pred HHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc--CCCEEEEEcc
Confidence 1237899999888642 11 11 12233455543 356666666664 3466777664
No 238
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=95.49 E-value=0.044 Score=54.41 Aligned_cols=25 Identities=16% Similarity=0.014 Sum_probs=22.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
+||.|+||+|+||++++..|+..|.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~ 25 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY 25 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC
Confidence 4899999999999999999998874
No 239
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=95.48 E-value=0.065 Score=53.84 Aligned_cols=73 Identities=25% Similarity=0.234 Sum_probs=43.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
+.+||+|+||+|.+|..++..|..+..-. ..|.++-.+.+..+ -..+. . .+..+..-+..++.++|
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~----~~l~~laS~~saG~----~~~~~----~--~~~~v~~~~~~~~~~~D 68 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPV----GELYALASEESAGE----TLRFG----G--KSVTVQDAAEFDWSQAQ 68 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCc----eEEEEEEccCcCCc----eEEEC----C--cceEEEeCchhhccCCC
Confidence 45799999999999999999888753311 23333333322111 11111 1 13444333445568999
Q ss_pred EEEEeCC
Q 015897 175 WALLIGA 181 (398)
Q Consensus 175 iViitag 181 (398)
+|+++.+
T Consensus 69 vvf~a~p 75 (336)
T PRK08040 69 LAFFVAG 75 (336)
T ss_pred EEEECCC
Confidence 9999764
No 240
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.48 E-value=0.13 Score=48.40 Aligned_cols=121 Identities=12% Similarity=0.038 Sum_probs=66.7
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec--Ccc---
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI--NPY--- 167 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~--~~~--- 167 (398)
.+.++|.|+||+|.+|..++..|+..|. .|.+ .+++.+.++....++........ ....++. +..
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 79 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGA-----HVLV----NGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAF 79 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC-----eEEE----EeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 3457899999999999999999998775 2544 36666666666666653210010 0111110 011
Q ss_pred ----cccCCCcEEEEeCCCCC-CCC--Cchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECCCc
Q 015897 168 ----ELFEDAEWALLIGAKPR-GPG--MERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGNPC 225 (398)
Q Consensus 168 ----eal~dADiViitag~~r-k~g--~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtNP~ 225 (398)
+.+...|.+|.++|... .+- .+.. ..+..|.. +.+.+.+.+.+. ..+.+|+++...
T Consensus 80 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~~ss~~ 149 (256)
T PRK06124 80 ARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ--GYGRIIAITSIA 149 (256)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEEeech
Confidence 11234689999887532 111 1111 23455544 344444555443 457777777653
No 241
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.19 Score=48.48 Aligned_cols=114 Identities=13% Similarity=0.081 Sum_probs=65.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEE-EecC--cc-----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVK-IGIN--PY----- 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~-i~~~--~~----- 167 (398)
.+.+.|+||+|.+|.+++..|+..|. .|.+ .+++++.++....+|.... .++. +..| +.
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~-----~Vv~----~~r~~~~l~~~~~~l~~~~----~~~~~~~~Dv~d~~~v~~ 72 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGA-----RVVL----GDVDKPGLRQAVNHLRAEG----FDVHGVMCDVRHREEVTH 72 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhcC----CeEEEEeCCCCCHHHHHH
Confidence 34799999999999999999999875 2443 3566667766666664321 0111 1111 11
Q ss_pred ------cccCCCcEEEEeCCCCCC-C--CCchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 168 ------ELFEDAEWALLIGAKPRG-P--GMERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 168 ------eal~dADiViitag~~rk-~--g~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+.+...|++|..+|.... + ..+.. ..+..|.. +.+.+.+.+.+. ...+.+|+++.
T Consensus 73 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~-~~~g~iv~isS 143 (275)
T PRK05876 73 LADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQ-GTGGHVVFTAS 143 (275)
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCCEEEEeCC
Confidence 223457999999886421 1 12222 23455543 444445555453 23567777764
No 242
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.26 Score=46.03 Aligned_cols=112 Identities=13% Similarity=0.058 Sum_probs=61.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe---cCcccc---
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG---INPYEL--- 169 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~---~~~~ea--- 169 (398)
.+++.|+||+|.+|++++..|+..|. .+.+ ++++.+.++....++. . + .++... ..+++.
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~~-~--~--~~~~~~~~D~~~~~~~~~ 70 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREGA-----RVVV----ADRDAEAAERVAAAIA-A--G--GRAFARQGDVGSAEAVEA 70 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC-----eEEE----ecCCHHHHHHHHHHHh-c--C--CeEEEEEcCCCCHHHHHH
Confidence 45899999999999999999998774 2443 3566555554444443 1 1 111111 112222
Q ss_pred --------cCCCcEEEEeCCCCCC-C--CCchh---hhHHHHHHH----HHHHHHHHHHhcCCCeEEEEECC
Q 015897 170 --------FEDAEWALLIGAKPRG-P--GMERA---GLLDINGQI----FAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 170 --------l~dADiViitag~~rk-~--g~~r~---dll~~N~~i----~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+.+.|+||.++|.... + ..+.. ..+..|..- .+.+.+.+++. ..+.+++++-
T Consensus 71 ~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~ii~~sS 140 (252)
T PRK06138 71 LVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ--GGGSIVNTAS 140 (252)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--CCeEEEEECC
Confidence 2478999998886421 1 11222 224445433 34444445543 4566666664
No 243
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=95.47 E-value=0.042 Score=53.96 Aligned_cols=100 Identities=17% Similarity=0.328 Sum_probs=68.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
..+|+.|| .|++|++++..|+..|. .+.+ | |++.. ...+|++.. .++...+.|..++||+
T Consensus 35 ~~~iGFIG-LG~MG~~M~~nLik~G~-----kVtV--~--dr~~~----k~~~f~~~G------a~v~~sPaeVae~sDv 94 (327)
T KOG0409|consen 35 KTRIGFIG-LGNMGSAMVSNLIKAGY-----KVTV--Y--DRTKD----KCKEFQEAG------ARVANSPAEVAEDSDV 94 (327)
T ss_pred cceeeEEe-eccchHHHHHHHHHcCC-----EEEE--E--eCcHH----HHHHHHHhc------hhhhCCHHHHHhhcCE
Confidence 46999999 79999999999999886 3544 4 45444 345565543 1244568999999999
Q ss_pred EEEeCCCCC----------------CCCCch-hhhHHHHHHHHHHHHHHHHHhcCCCeEE
Q 015897 176 ALLIGAKPR----------------GPGMER-AGLLDINGQIFAEQGKALNAVASRNVKV 218 (398)
Q Consensus 176 Viitag~~r----------------k~g~~r-~dll~~N~~i~~~i~~~i~~~a~p~a~v 218 (398)
||..-+.|- ++|..- .|.-.......+++++.+.. .+++.
T Consensus 95 vitmv~~~~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~---~~~~~ 151 (327)
T KOG0409|consen 95 VITMVPNPKDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISN---KGGRF 151 (327)
T ss_pred EEEEcCChHhhHHHhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHh---CCCeE
Confidence 998765442 122222 45555556778888888876 35665
No 244
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.064 Score=49.47 Aligned_cols=77 Identities=16% Similarity=0.106 Sum_probs=45.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--C-------c
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--N-------P 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~-------~ 166 (398)
.++|.|+||+|.+|.+++..|+..|. .+.+ ++++.+.......++...... .....+.. + .
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 76 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGA-----RVAL----IGRGAAPLSQTLPGVPADALR-IGGIDLVDPQAARRAVDEV 76 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCC-----eEEE----EeCChHhHHHHHHHHhhcCce-EEEeecCCHHHHHHHHHHH
Confidence 46899999999999999999998875 2433 356655554444444322100 01111111 0 1
Q ss_pred ccccCCCcEEEEeCCC
Q 015897 167 YELFEDAEWALLIGAK 182 (398)
Q Consensus 167 ~eal~dADiViitag~ 182 (398)
.+.+...|+||..+|.
T Consensus 77 ~~~~~~~d~vi~~ag~ 92 (239)
T PRK12828 77 NRQFGRLDALVNIAGA 92 (239)
T ss_pred HHHhCCcCEEEECCcc
Confidence 1223468999998764
No 245
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.44 E-value=0.018 Score=54.51 Aligned_cols=69 Identities=20% Similarity=0.278 Sum_probs=44.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe--cC----ccccc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG--IN----PYELF 170 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~--~~----~~eal 170 (398)
|+++|+|+ |.+|+++|..|...|. .+.+ +|.++++++....|-.+. .+... ++ ...-+
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~-----~Vv~----Id~d~~~~~~~~~~~~~~------~~v~gd~t~~~~L~~agi 64 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGH-----NVVL----IDRDEERVEEFLADELDT------HVVIGDATDEDVLEEAGI 64 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCC-----ceEE----EEcCHHHHHHHhhhhcce------EEEEecCCCHHHHHhcCC
Confidence 68999995 9999999999999875 3554 577877776434321111 11111 11 22337
Q ss_pred CCCcEEEEeCC
Q 015897 171 EDAEWALLIGA 181 (398)
Q Consensus 171 ~dADiViitag 181 (398)
.++|.++.+-|
T Consensus 65 ~~aD~vva~t~ 75 (225)
T COG0569 65 DDADAVVAATG 75 (225)
T ss_pred CcCCEEEEeeC
Confidence 88999988644
No 246
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.44 E-value=0.16 Score=48.10 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=48.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec--C-------c
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI--N-------P 166 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~--~-------~ 166 (398)
|++.|+||+|.+|..++..|+..|. .+.+ .+++++.++....++.+.. ... ....++. + -
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~-----~V~~----~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~ 70 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA-----RVVI----SSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEA 70 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC-----EEEE----EeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHH
Confidence 4899999999999999999999875 2443 3677777766666665321 110 0111110 0 0
Q ss_pred ccccCCCcEEEEeCCCC
Q 015897 167 YELFEDAEWALLIGAKP 183 (398)
Q Consensus 167 ~eal~dADiViitag~~ 183 (398)
.+.+..-|++|..+|..
T Consensus 71 ~~~~g~id~li~naG~~ 87 (259)
T PRK08340 71 WELLGGIDALVWNAGNV 87 (259)
T ss_pred HHhcCCCCEEEECCCCC
Confidence 12345789999988864
No 247
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.44 E-value=0.33 Score=44.96 Aligned_cols=47 Identities=19% Similarity=0.171 Sum_probs=32.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
+++|.|+||+|.+|..++..|+..|. .+.+ . .+++.+.++....++.
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-----~v~~--~-~~r~~~~~~~~~~~~~ 51 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-----KVVI--A-YDINEEAAQELLEEIK 51 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-----EEEE--E-cCCCHHHHHHHHHHHH
Confidence 45899999999999999999998764 2433 1 1555555554444444
No 248
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.43 E-value=0.37 Score=45.12 Aligned_cols=118 Identities=19% Similarity=0.141 Sum_probs=66.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc--ceEEEecCc------
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL--REVKIGINP------ 166 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~--~~v~i~~~~------ 166 (398)
+.++|.|+||+|++|.+++..|+..|. .+.+ ++++.+.++....++.+...... ....+...+
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~-----~Vi~----~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~ 81 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGA-----TVIL----LGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQ 81 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-----cEEE----EeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHH
Confidence 456899999999999999999998764 2443 36666666666666654321100 011111001
Q ss_pred -----ccccCCCcEEEEeCCCCC--CC--CCchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 -----YELFEDAEWALLIGAKPR--GP--GMERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 -----~eal~dADiViitag~~r--k~--g~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+...|+||..++... .+ ..+.. ..+..|.. ..+.+.+.+.+. +.+.+++++.
T Consensus 82 ~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~--~~~~iv~~ss 152 (247)
T PRK08945 82 LADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS--PAASLVFTSS 152 (247)
T ss_pred HHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC--CCCEEEEEcc
Confidence 123446899999887532 22 12222 23445544 344444444542 5567777765
No 249
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=95.42 E-value=0.051 Score=53.99 Aligned_cols=103 Identities=17% Similarity=0.174 Sum_probs=56.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEE-----Ee--cCccc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVK-----IG--INPYE 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~-----i~--~~~~e 168 (398)
|+||.|+||+|+||++++..|+..+. . .+.+ . |..... +....+.+.. +. .++. ++ .+..+
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~-~---~v~~--~--~~~~~~--~~~~~~~~~~-~~-~~~~~~~~Dl~d~~~~~~ 68 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETS-D---AVVV--V--DKLTYA--GNLMSLAPVA-QS-ERFAFEKVDICDRAELAR 68 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCC-C---EEEE--E--ecCccc--cchhhhhhcc-cC-CceEEEECCCcChHHHHH
Confidence 46899999999999999999998874 1 1322 2 332111 0011111100 00 0111 11 11123
Q ss_pred ccC--CCcEEEEeCCCCCCC--CCchhhhHHHHHHHHHHHHHHHHH
Q 015897 169 LFE--DAEWALLIGAKPRGP--GMERAGLLDINGQIFAEQGKALNA 210 (398)
Q Consensus 169 al~--dADiViitag~~rk~--g~~r~dll~~N~~i~~~i~~~i~~ 210 (398)
.++ +.|+||.+++..... ..........|..-...+.+.+.+
T Consensus 69 ~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~ 114 (355)
T PRK10217 69 VFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARA 114 (355)
T ss_pred HHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHH
Confidence 344 389999998764221 112345677788777777777765
No 250
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=95.42 E-value=0.063 Score=45.89 Aligned_cols=74 Identities=14% Similarity=0.111 Sum_probs=43.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
|||+|+|++|.+|+.++..+....-+ +++-. +|++..... -.|+.+...-....+.++.+..+.+..+|+|
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~----~lv~~---v~~~~~~~~--g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVv 71 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGF----ELVGA---VDRKPSAKV--GKDVGELAGIGPLGVPVTDDLEELLEEADVV 71 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTE----EEEEE---EETTTSTTT--TSBCHHHCTSST-SSBEBS-HHHHTTH-SEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCc----EEEEE---EecCCcccc--cchhhhhhCcCCcccccchhHHHhcccCCEE
Confidence 58999997799999999999884321 23321 355442111 1333332211122455667778888899998
Q ss_pred EEe
Q 015897 177 LLI 179 (398)
Q Consensus 177 iit 179 (398)
|-.
T Consensus 72 IDf 74 (124)
T PF01113_consen 72 IDF 74 (124)
T ss_dssp EEE
T ss_pred EEc
Confidence 865
No 251
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.40 E-value=0.25 Score=45.59 Aligned_cols=26 Identities=23% Similarity=0.217 Sum_probs=23.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
+++|.|+||+|.+|..++..|++.|.
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~ 31 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGA 31 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC
Confidence 56899999999999999999999875
No 252
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.3 Score=45.78 Aligned_cols=116 Identities=14% Similarity=0.111 Sum_probs=59.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec--CcccccC-C
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI--NPYELFE-D 172 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~--~~~eal~-d 172 (398)
++|.|+||+|.+|.+++..|+..|. .+.+ .+++.+.++....+......... ....++. ....++. .
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGH-----NVIA----GVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWD 73 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCC
Confidence 4799999999999999999998874 2433 24444444333322222110110 0111111 1112233 7
Q ss_pred CcEEEEeCCCCC-CCCC--chh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 173 AEWALLIGAKPR-GPGM--ERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 173 ADiViitag~~r-k~g~--~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.|+||..+|... .+.. +.. ..+..|.. +.+.+.+.+.+. ..+.+|++|-
T Consensus 74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~~SS 132 (257)
T PRK09291 74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR--GKGKVVFTSS 132 (257)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCceEEEEcC
Confidence 999999988652 1111 111 12333433 334444455543 3367777763
No 253
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=95.37 E-value=0.02 Score=55.80 Aligned_cols=75 Identities=24% Similarity=0.213 Sum_probs=47.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
..||+|+||+|+|||||+-.|...+. +.|++.-+ -.+....+++....-..+..........++.+|-
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm~egh----~VIa~Dn~--------ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~ 94 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLMTEGH----EVIALDNY--------FTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQ 94 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHHhcCC----eEEEEecc--------cccchhhcchhccCcceeEEEeechhHHHHHhhh
Confidence 47999999999999999999998873 23454222 1223333444431112234344445668889999
Q ss_pred EEEeCCC
Q 015897 176 ALLIGAK 182 (398)
Q Consensus 176 Viitag~ 182 (398)
|+..|..
T Consensus 95 IyhLAap 101 (350)
T KOG1429|consen 95 IYHLAAP 101 (350)
T ss_pred hhhhccC
Confidence 9886643
No 254
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.37 E-value=0.053 Score=46.72 Aligned_cols=77 Identities=21% Similarity=0.228 Sum_probs=47.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEeccccc-----------------chhhHHHHHHHHhhhcCCCcc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSER-----------------SLQALEGVAMELEDSLFPLLR 158 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~-----------------~~~~l~g~a~DL~d~~~~~~~ 158 (398)
..||+|+|+ |.+|+.++..|+..|+ + .|.|+|-|. ...+++.....|+... |..
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv-~-----~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~n-p~~- 72 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGV-G-----KITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEIN-PDV- 72 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTT-S-----EEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHS-TTS-
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCC-C-----ceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhc-Cce-
Confidence 358999995 9999999999999987 2 233344432 2344555555555443 322
Q ss_pred eEEEecC------cccccCCCcEEEEeCC
Q 015897 159 EVKIGIN------PYELFEDAEWALLIGA 181 (398)
Q Consensus 159 ~v~i~~~------~~eal~dADiViitag 181 (398)
+++.... ..+.++++|+||.+..
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~d~vi~~~d 101 (135)
T PF00899_consen 73 EVEAIPEKIDEENIEELLKDYDIVIDCVD 101 (135)
T ss_dssp EEEEEESHCSHHHHHHHHHTSSEEEEESS
T ss_pred eeeeeecccccccccccccCCCEEEEecC
Confidence 2332222 2356779999998754
No 255
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.35 E-value=0.043 Score=56.72 Aligned_cols=104 Identities=19% Similarity=0.189 Sum_probs=63.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
..+|+|+|+ |.+|..++..|...|.. .|.+ .+++.++++..+.++.... + ...+..+.+.++|+
T Consensus 180 ~~~VlViGa-G~iG~~~a~~L~~~G~~----~V~v----~~rs~~ra~~la~~~g~~~------i-~~~~l~~~l~~aDv 243 (417)
T TIGR01035 180 GKKALLIGA-GEMGELVAKHLLRKGVG----KILI----ANRTYERAEDLAKELGGEA------V-KFEDLEEYLAEADI 243 (417)
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCC----EEEE----EeCCHHHHHHHHHHcCCeE------e-eHHHHHHHHhhCCE
Confidence 469999995 99999999999887752 2444 3677777666665543211 1 11245678899999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhH
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTN 228 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~ 228 (398)
||.+.+.+. |-.+ .+..+....--....+++-+++|-|+=
T Consensus 244 Vi~aT~s~~-~ii~------------~e~l~~~~~~~~~~~~viDla~Prdid 283 (417)
T TIGR01035 244 VISSTGAPH-PIVS------------KEDVERALRERTRPLFIIDIAVPRDVD 283 (417)
T ss_pred EEECCCCCC-ceEc------------HHHHHHHHhcCCCCeEEEEeCCCCCCC
Confidence 999866542 1011 111122211101246899999997763
No 256
>PRK05993 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.055 Score=52.01 Aligned_cols=112 Identities=8% Similarity=0.014 Sum_probs=61.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--Cccccc---
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--NPYELF--- 170 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~~~eal--- 170 (398)
+++|.|+||+|.+|.+++..|+..|. .|.+ .+++.+.++... +..... ....++. +..+.+
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~-----~Vi~----~~r~~~~~~~l~----~~~~~~-~~~Dl~d~~~~~~~~~~~ 69 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGW-----RVFA----TCRKEEDVAALE----AEGLEA-FQLDYAEPESIAALVAQV 69 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-----EEEE----EECCHHHHHHHH----HCCceE-EEccCCCHHHHHHHHHHH
Confidence 35799999999999999999998774 2443 356666554222 111000 0111111 000111
Q ss_pred -----CCCcEEEEeCCCCCC-C--CCch---hhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 171 -----EDAEWALLIGAKPRG-P--GMER---AGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 171 -----~dADiViitag~~rk-~--g~~r---~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
...|++|..+|.... + ..+. ...+..|.. ..+.+.+.+.+. ..+.||+++-
T Consensus 70 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~--~~g~iv~isS 135 (277)
T PRK05993 70 LELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ--GQGRIVQCSS 135 (277)
T ss_pred HHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc--CCCEEEEECC
Confidence 256999998876421 1 1111 234555543 356666667663 3567777764
No 257
>PLN02712 arogenate dehydrogenase
Probab=95.34 E-value=0.21 Score=54.68 Aligned_cols=92 Identities=23% Similarity=0.178 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCccccc-CCC
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELF-EDA 173 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal-~dA 173 (398)
+++||+||| .|.+|..++..|...|. .|.. + |++.... .+.++ . +....+..+.+ ++|
T Consensus 51 ~~~kIgIIG-~G~mG~slA~~L~~~G~-----~V~~--~--dr~~~~~--~A~~~-----G----v~~~~d~~e~~~~~a 109 (667)
T PLN02712 51 TQLKIAIIG-FGNYGQFLAKTLISQGH-----TVLA--H--SRSDHSL--AARSL-----G----VSFFLDPHDLCERHP 109 (667)
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCC-----EEEE--E--eCCHHHH--HHHHc-----C----CEEeCCHHHHhhcCC
Confidence 456999999 59999999999988763 2432 3 4543321 22221 1 12233444434 579
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHH-HhcCCCeEEEEECC
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALN-AVASRNVKVIVVGN 223 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~-~~a~p~a~vIvvtN 223 (398)
|+||++.. ...+.++.+.+. .+..++++|+.++.
T Consensus 110 DvViLavP----------------~~~~~~vl~~l~~~~l~~g~iVvDv~S 144 (667)
T PLN02712 110 DVILLCTS----------------IISTENVLKSLPLQRLKRNTLFVDVLS 144 (667)
T ss_pred CEEEEcCC----------------HHHHHHHHHhhhhhcCCCCeEEEECCC
Confidence 99999843 123444444443 22257888888864
No 258
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.34 E-value=0.28 Score=45.63 Aligned_cols=46 Identities=22% Similarity=0.148 Sum_probs=33.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
.++|.|+||+|.+|.+++..|+..|. .|.+ ++++.+.+.....++.
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~-----~V~~----~~r~~~~~~~~~~~l~ 51 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGA-----EVIV----VDICGDDAAATAELVE 51 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHH
Confidence 45899999999999999999998874 2433 3566666655555554
No 259
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=95.33 E-value=0.17 Score=55.93 Aligned_cols=95 Identities=19% Similarity=0.159 Sum_probs=58.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
.||+||| .|.+|..++..|...+... .|.. .|+++++++. +.++. . .....++..++++++|+|
T Consensus 4 ~~I~IIG-~G~mG~ala~~l~~~G~~~---~V~~----~d~~~~~~~~-a~~~g-----~--~~~~~~~~~~~~~~aDvV 67 (735)
T PRK14806 4 GRVVVIG-LGLIGGSFAKALRERGLAR---EVVA----VDRRAKSLEL-AVSLG-----V--IDRGEEDLAEAVSGADVI 67 (735)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhcCCCC---EEEE----EECChhHHHH-HHHCC-----C--CCcccCCHHHHhcCCCEE
Confidence 5899999 5999999999999877411 2433 3666666542 22211 1 001223455678999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
|++... ..+.++.+.+.++..++.+|+.++.
T Consensus 68 ilavp~----------------~~~~~vl~~l~~~~~~~~ii~d~~s 98 (735)
T PRK14806 68 VLAVPV----------------LAMEKVLADLKPLLSEHAIVTDVGS 98 (735)
T ss_pred EECCCH----------------HHHHHHHHHHHHhcCCCcEEEEcCC
Confidence 998541 2345555566655446666655543
No 260
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.29 E-value=0.26 Score=46.83 Aligned_cols=118 Identities=9% Similarity=0.046 Sum_probs=64.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhh-HHHHHHHHhhhcC-CC-cceEEEec-Cc----c
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQA-LEGVAMELEDSLF-PL-LREVKIGI-NP----Y 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~-l~g~a~DL~d~~~-~~-~~~v~i~~-~~----~ 167 (398)
.++|.|+||+|.+|.+++..|+..+-. .+.+ .+++++. ++..+.++..... .. .....++. +. .
T Consensus 8 ~~~vlItGas~giG~~la~~l~~~gg~----~V~~----~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~ 79 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYLKNAPA----RVVL----AALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVI 79 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCC----eEEE----EeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHH
Confidence 468999999999999999999987521 2443 2566554 6666666654210 00 00111111 00 1
Q ss_pred cc---cCCCcEEEEeCCCCCCCCC---ch---hhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 168 EL---FEDAEWALLIGAKPRGPGM---ER---AGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 168 ea---l~dADiViitag~~rk~g~---~r---~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+. ..+.|++|..+|....... +. .+.+..|.. +.+.+.+.+.+. ..+.+++++-
T Consensus 80 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~--~~~~iv~isS 146 (253)
T PRK07904 80 DAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ--GFGQIIAMSS 146 (253)
T ss_pred HHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc--CCceEEEEec
Confidence 11 1379999987776422111 11 123566643 335566677664 3466666653
No 261
>PRK09242 tropinone reductase; Provisional
Probab=95.27 E-value=0.48 Score=44.57 Aligned_cols=115 Identities=14% Similarity=0.160 Sum_probs=66.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEE-EecC---------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVK-IGIN--------- 165 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~-i~~~--------- 165 (398)
.+++.|+||+|.+|..++..|+..|. .|.+ .+++.+.++....++.+.. +. .++. +..|
T Consensus 9 ~k~~lItGa~~gIG~~~a~~l~~~G~-----~v~~----~~r~~~~~~~~~~~l~~~~-~~-~~~~~~~~Dl~~~~~~~~ 77 (257)
T PRK09242 9 GQTALITGASKGIGLAIAREFLGLGA-----DVLI----VARDADALAQARDELAEEF-PE-REVHGLAADVSDDEDRRA 77 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-----EEEE----EeCCHHHHHHHHHHHHhhC-CC-CeEEEEECCCCCHHHHHH
Confidence 46899999999999999999998875 2443 3566677776666665431 11 1111 1111
Q ss_pred ----cccccCCCcEEEEeCCCCC-CC--CCchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 166 ----PYELFEDAEWALLIGAKPR-GP--GMERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 166 ----~~eal~dADiViitag~~r-k~--g~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
-.+.+...|+||.++|... .+ ..+.. ..+..|.. +.+.+.+.+.+. +.+.+|+++-
T Consensus 78 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~ii~~sS 147 (257)
T PRK09242 78 ILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH--ASSAIVNIGS 147 (257)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCceEEEECc
Confidence 1233556899999887531 11 11222 22444433 445555555553 4566776664
No 262
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.26 E-value=0.32 Score=46.45 Aligned_cols=47 Identities=19% Similarity=0.334 Sum_probs=34.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELED 151 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d 151 (398)
.+++.|+||+|.+|.+++..|+..|. .+.+ .+++.+.++....++.+
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~~ 56 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAGA-----KVAI----LDRNQEKAEAVVAEIKA 56 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHh
Confidence 36899999999999999999998875 2443 35666666656665543
No 263
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=95.26 E-value=0.093 Score=55.40 Aligned_cols=102 Identities=15% Similarity=0.188 Sum_probs=60.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccC---
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFE--- 171 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~--- 171 (398)
++.+|++|| .|.+|..++..|+..|. ++.+ + |++.++.+..+....... . ..+....+..+..+
T Consensus 5 ~~~~IG~IG-LG~MG~~mA~nL~~~G~-----~V~V--~--NRt~~k~~~l~~~~~~~G--a-~~~~~a~s~~e~v~~l~ 71 (493)
T PLN02350 5 ALSRIGLAG-LAVMGQNLALNIAEKGF-----PISV--Y--NRTTSKVDETVERAKKEG--N-LPLYGFKDPEDFVLSIQ 71 (493)
T ss_pred CCCCEEEEe-eHHHHHHHHHHHHhCCC-----eEEE--E--CCCHHHHHHHHHhhhhcC--C-cccccCCCHHHHHhcCC
Confidence 467899999 79999999999999885 3544 4 677676654433211100 0 11122233344443
Q ss_pred CCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 172 DAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 172 dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
.+|+||++-.. .+.++++...+-....++.++|..||-
T Consensus 72 ~~dvIi~~v~~---------------~~aV~~Vi~gl~~~l~~G~iiID~sT~ 109 (493)
T PLN02350 72 KPRSVIILVKA---------------GAPVDQTIKALSEYMEPGDCIIDGGNE 109 (493)
T ss_pred CCCEEEEECCC---------------cHHHHHHHHHHHhhcCCCCEEEECCCC
Confidence 49999987432 233444433333333577788888775
No 264
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=95.25 E-value=0.065 Score=54.75 Aligned_cols=27 Identities=26% Similarity=0.169 Sum_probs=23.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
+++||+|+||+|.+|..++..|.....
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~ 63 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPD 63 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCC
Confidence 456999999999999999999988754
No 265
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=95.24 E-value=0.18 Score=54.95 Aligned_cols=97 Identities=7% Similarity=-0.002 Sum_probs=60.4
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCC
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDA 173 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dA 173 (398)
+..|||.|+||+|++|++++..|...+. ++.+..- |+.. .+....++.+ .+.
T Consensus 378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~-----~v~~~~~--~l~d--~~~v~~~i~~-------------------~~p 429 (668)
T PLN02260 378 KPSLKFLIYGRTGWIGGLLGKLCEKQGI-----AYEYGKG--RLED--RSSLLADIRN-------------------VKP 429 (668)
T ss_pred CCCceEEEECCCchHHHHHHHHHHhCCC-----eEEeecc--cccc--HHHHHHHHHh-------------------hCC
Confidence 3456999999999999999999987763 2322111 1110 0111111111 157
Q ss_pred cEEEEeCCCCCCCC-----CchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEE
Q 015897 174 EWALLIGAKPRGPG-----MERAGLLDINGQIFAEQGKALNAVASRNVKVIVV 221 (398)
Q Consensus 174 DiViitag~~rk~g-----~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvv 221 (398)
|+||.+++....+. .+..+....|+.-...+++.+.+. ++.++++
T Consensus 430 d~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~---g~~~v~~ 479 (668)
T PLN02260 430 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN---GLLMMNF 479 (668)
T ss_pred CEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc---CCeEEEE
Confidence 99999987643221 234567888999999999999885 3345555
No 266
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.27 Score=46.08 Aligned_cols=46 Identities=22% Similarity=0.283 Sum_probs=34.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
.++|.|+||+|.||.+++..|+..|. .|.+ .+++.++++....++.
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G~-----~Vi~----~~r~~~~~~~~~~~l~ 54 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAGA-----KVVL----ASRRVERLKELRAEIE 54 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHH
Confidence 36899999999999999999998774 2433 3566676665555553
No 267
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.23 E-value=0.42 Score=44.58 Aligned_cols=114 Identities=24% Similarity=0.214 Sum_probs=62.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEE-EecC--ccc----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVK-IGIN--PYE---- 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~-i~~~--~~e---- 168 (398)
.+++.|+||+|.+|.+++..|+..|. .+.+ + .+++.+.++....++.... .++. +..| +.+
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~-----~v~~-~--~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~ 71 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGY-----DIAV-N--YARSRKAAEETAEEIEALG----RKALAVKANVGDVEKIKE 71 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-----EEEE-E--cCCCHHHHHHHHHHHHhcC----CeEEEEEcCCCCHHHHHH
Confidence 35899999999999999999999874 2433 1 2455566655555554321 1111 1111 111
Q ss_pred -------ccCCCcEEEEeCCCCC-CCC--Cchhh---hHHHHH----HHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 169 -------LFEDAEWALLIGAKPR-GPG--MERAG---LLDING----QIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 169 -------al~dADiViitag~~r-k~g--~~r~d---ll~~N~----~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+...|+||..+|... .|- .+..+ .+..|. .+.+.+.+.+.+ ...+.++++|.
T Consensus 72 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~g~iv~~sS 141 (250)
T PRK08063 72 MFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEK--VGGGKIISLSS 141 (250)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCeEEEEEcc
Confidence 1235899999877531 221 11111 233443 344555555544 24567777765
No 268
>PRK12829 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.4 Score=45.02 Aligned_cols=27 Identities=19% Similarity=0.222 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
+.+++.|+||+|.+|.+++..|+..|.
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~ 36 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGA 36 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC
Confidence 347999999999999999999998875
No 269
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.22 E-value=0.11 Score=47.69 Aligned_cols=24 Identities=21% Similarity=0.194 Sum_probs=21.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAG 119 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~ 119 (398)
|+++.|+||+|.+|..++..|+..
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~ 26 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT 26 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh
Confidence 468999999999999999999876
No 270
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.23 Score=47.75 Aligned_cols=91 Identities=15% Similarity=0.179 Sum_probs=46.7
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEecC--cc------c
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGIN--PY------E 168 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~~--~~------e 168 (398)
.+.|+| +|.+|.+++..|. .|. .|.+ .+++++.++....++.+..... .....++.. -. +
T Consensus 4 ~~lItG-a~gIG~~la~~l~-~G~-----~Vv~----~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~ 72 (275)
T PRK06940 4 VVVVIG-AGGIGQAIARRVG-AGK-----KVLL----ADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQ 72 (275)
T ss_pred EEEEEC-CChHHHHHHHHHh-CCC-----EEEE----EeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHH
Confidence 445556 5899999999985 442 2443 3566666665555554321000 011112110 00 1
Q ss_pred ccCCCcEEEEeCCCCCCCCCchhhhHHHHHHH
Q 015897 169 LFEDAEWALLIGAKPRGPGMERAGLLDINGQI 200 (398)
Q Consensus 169 al~dADiViitag~~rk~g~~r~dll~~N~~i 200 (398)
.+...|++|..+|... ...+-...+..|..-
T Consensus 73 ~~g~id~li~nAG~~~-~~~~~~~~~~vN~~g 103 (275)
T PRK06940 73 TLGPVTGLVHTAGVSP-SQASPEAILKVDLYG 103 (275)
T ss_pred hcCCCCEEEECCCcCC-chhhHHHHHHHhhHH
Confidence 2346899999988642 112223445556443
No 271
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.39 Score=45.20 Aligned_cols=117 Identities=13% Similarity=0.092 Sum_probs=61.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEecCccc------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGINPYE------ 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~~~~e------ 168 (398)
.++|.|+||+|.+|..++..|+..|.- .|.+ .+++.+.+.....++....... ...+.++ +.+
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~G~~----~V~~----~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~--~~~~~~~~~ 75 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAERGAA----GLVI----CGRNAEKGEAQAAELEALGAKAVFVQADLS--DVEDCRRVV 75 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCC----eEEE----EcCCHHHHHHHHHHHHhcCCeEEEEEccCC--CHHHHHHHH
Confidence 358999999999999999999988751 1433 3555555554444442211000 0011111 121
Q ss_pred -----ccCCCcEEEEeCCCCCCCC---Cchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 169 -----LFEDAEWALLIGAKPRGPG---MERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 169 -----al~dADiViitag~~rk~g---~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+.|++|.++|...... .+.. ..+..|.. +++...+.+.+. ...+.+++++.
T Consensus 76 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~g~iv~~ss 144 (260)
T PRK06198 76 AAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRR-KAEGTIVNIGS 144 (260)
T ss_pred HHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCCEEEEECC
Confidence 1246899999988653211 1222 22444433 334444555543 23456666664
No 272
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.33 Score=45.20 Aligned_cols=116 Identities=18% Similarity=0.102 Sum_probs=65.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC--cceEEEecCccc------
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL--LREVKIGINPYE------ 168 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~--~~~v~i~~~~~e------ 168 (398)
++|.|+||+|.+|.+++..|+..|. .+.+ .+++++.++....++.....+. .....+...+.+
T Consensus 7 k~vlItG~sggiG~~la~~l~~~g~-----~V~~----~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (239)
T PRK08703 7 KTILVTGASQGLGEQVAKAYAAAGA-----TVIL----VARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFA 77 (239)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCC-----EEEE----EeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHH
Confidence 5899999999999999999998764 2443 3677777776666554321011 111222111111
Q ss_pred -----cc-CCCcEEEEeCCCC--CCCCC--chh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 169 -----LF-EDAEWALLIGAKP--RGPGM--ERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 169 -----al-~dADiViitag~~--rk~g~--~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+ ...|+||.++|.. ..|-. +.. ..+..|.- +.+.+.+.+.+. ..+.+++++.
T Consensus 78 ~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~iv~~ss 147 (239)
T PRK08703 78 ATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS--PDASVIFVGE 147 (239)
T ss_pred HHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC--CCCEEEEEec
Confidence 12 4679999988853 22221 122 23444543 455555555553 4566666654
No 273
>PRK06139 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.3 Score=48.72 Aligned_cols=116 Identities=12% Similarity=-0.047 Sum_probs=65.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec--Cc------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI--NP------ 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~--~~------ 166 (398)
.++|.|+||+|.||.+++..|+..|. .|.+ .+++++.++....++.+...... ....++. +-
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G~-----~Vvl----~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~ 77 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRGA-----RLVL----AARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQ 77 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCCC-----EEEE----EECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Confidence 35899999999999999999999875 2443 36777888777666654221100 0111211 00
Q ss_pred -ccccCCCcEEEEeCCCCCC-C-C-Cc---hhhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEEC
Q 015897 167 -YELFEDAEWALLIGAKPRG-P-G-ME---RAGLLDINGQ----IFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 167 -~eal~dADiViitag~~rk-~-g-~~---r~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
.+.+...|++|.++|.... + . .+ -.+.+..|.- +.+...+.+.+. ..+.+|+++
T Consensus 78 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~--~~g~iV~is 142 (330)
T PRK06139 78 AASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ--GHGIFINMI 142 (330)
T ss_pred HHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc--CCCEEEEEc
Confidence 1112567999999886421 1 1 11 1123444432 344455555553 356777665
No 274
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.34 Score=45.69 Aligned_cols=116 Identities=11% Similarity=0.005 Sum_probs=66.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ec--Cccc----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GI--NPYE---- 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~--~~~e---- 168 (398)
.+++.|+||+|.+|.+++..|+..|. .+.+ .+++++.++..+.++...... .++.. .. .+.+
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~-----~vv~----~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~ 75 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGA-----AVAL----ADLDAALAERAAAAIARDVAG--ARVLAVPADVTDAASVAA 75 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhccCC--ceEEEEEccCCCHHHHHH
Confidence 35799999999999999999998875 2443 367777777677666542101 11111 11 1111
Q ss_pred -------ccCCCcEEEEeCCCCC-CC-C-Cchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 169 -------LFEDAEWALLIGAKPR-GP-G-MERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 169 -------al~dADiViitag~~r-k~-g-~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
.+...|++|..+|... .+ . .+.. ..+..|.. +.+...+.+.+. ..+.||+++--
T Consensus 76 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~isS~ 146 (260)
T PRK07063 76 AVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER--GRGSIVNIAST 146 (260)
T ss_pred HHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh--CCeEEEEECCh
Confidence 2346899999888542 11 1 1222 22444443 344555555542 45777777643
No 275
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.18 E-value=0.038 Score=52.48 Aligned_cols=42 Identities=19% Similarity=0.280 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHH
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGV 145 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~ 145 (398)
+.+++.|+||+|.+|.+++..|+..|. .|.+ .+++.+.++..
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-----~V~~----~~r~~~~~~~l 45 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-----RVAV----LDKSAAGLQEL 45 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHH
Confidence 346899999999999999999998875 2443 36666655433
No 276
>PLN02253 xanthoxin dehydrogenase
Probab=95.18 E-value=0.1 Score=49.89 Aligned_cols=116 Identities=9% Similarity=0.100 Sum_probs=62.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEec--Cccc----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGI--NPYE---- 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~--~~~e---- 168 (398)
.+++.|+||+|.+|.+++..|+..|. .+.+ .+++.+.++....++.... .. .....++. ...+
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~-----~v~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~ 87 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGA-----KVCI----VDLQDDLGQNVCDSLGGEP-NVCFFHCDVTVEDDVSRAVDF 87 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC-----EEEE----EeCCHHHHHHHHHHhcCCC-ceEEEEeecCCHHHHHHHHHH
Confidence 35899999999999999999998874 2443 2555555554444442210 00 00111111 0111
Q ss_pred ---ccCCCcEEEEeCCCCCCC-C----Cch---hhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 169 ---LFEDAEWALLIGAKPRGP-G----MER---AGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 169 ---al~dADiViitag~~rk~-g----~~r---~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+...|++|..+|....+ + .+. ...+..|.. +++...+.+.+. ..+.+++++-
T Consensus 88 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~g~ii~isS 155 (280)
T PLN02253 88 TVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL--KKGSIVSLCS 155 (280)
T ss_pred HHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc--CCceEEEecC
Confidence 123689999998864321 1 111 233555533 344555555542 4566777764
No 277
>PRK05855 short chain dehydrogenase; Validated
Probab=95.15 E-value=0.2 Score=52.77 Aligned_cols=118 Identities=13% Similarity=0.025 Sum_probs=68.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEecC---------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGIN--------- 165 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~~--------- 165 (398)
..++.|+||+|.+|.+++..|+..|. .|.+ .+++.+.++..+.++....... .....++..
T Consensus 315 ~~~~lv~G~s~giG~~~a~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~ 385 (582)
T PRK05855 315 GKLVVVTGAGSGIGRETALAFAREGA-----EVVA----SDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEW 385 (582)
T ss_pred CCEEEEECCcCHHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence 36899999999999999999998875 2443 3677777776666665321000 001111110
Q ss_pred cccccCCCcEEEEeCCCCCCC---CCchh---hhHHHHH----HHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 166 PYELFEDAEWALLIGAKPRGP---GMERA---GLLDING----QIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 166 ~~eal~dADiViitag~~rk~---g~~r~---dll~~N~----~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
-.+.+...|++|..+|..... ..+.. ..+..|. .+.+.+.+.+.+. +.++.||+++-
T Consensus 386 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~g~iv~~sS 452 (582)
T PRK05855 386 VRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVER-GTGGHIVNVAS 452 (582)
T ss_pred HHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCcEEEEECC
Confidence 011233579999998875321 11221 2344553 3445555566664 34577777764
No 278
>PRK07985 oxidoreductase; Provisional
Probab=95.15 E-value=0.29 Score=47.65 Aligned_cols=121 Identities=11% Similarity=0.028 Sum_probs=61.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEec---------Cc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGI---------NP 166 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~---------~~ 166 (398)
+++.|+||+|.+|.+++..|+..|. .+.+ .+.+.+.+.++.....+.+..... .....++. ..
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~-----~Vi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 122 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGA-----DVAI--SYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA 122 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC-----EEEE--ecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 5899999999999999999999875 2443 333333333433332222211000 00011110 01
Q ss_pred ccccCCCcEEEEeCCCCC--CC--CCchh---hhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 167 YELFEDAEWALLIGAKPR--GP--GMERA---GLLDINGQIFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 167 ~eal~dADiViitag~~r--k~--g~~r~---dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
.+.+...|++|..+|... .+ ..+.. ..+..|+.-...+.+.+..+...++.||++|--
T Consensus 123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~ 187 (294)
T PRK07985 123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI 187 (294)
T ss_pred HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence 123456799999887532 11 12222 335566544434444433321235677777743
No 279
>PLN02686 cinnamoyl-CoA reductase
Probab=95.15 E-value=0.071 Score=53.86 Aligned_cols=107 Identities=10% Similarity=0.060 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhc-CC-CcceEE-----Eec--C
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSL-FP-LLREVK-----IGI--N 165 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~-~~-~~~~v~-----i~~--~ 165 (398)
++++|.|+||+|++|++++..|+..|. .|.+ + .++.+.++.. .++.... .. ....+. ++. .
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G~-----~V~~-~---~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~ 121 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHGY-----SVRI-A---VDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPES 121 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-----EEEE-E---eCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHH
Confidence 356999999999999999999999875 2433 1 2232333221 2221100 00 000111 111 1
Q ss_pred cccccCCCcEEEEeCCCCCCCCC--chhhhHHHHHHHHHHHHHHHHHh
Q 015897 166 PYELFEDAEWALLIGAKPRGPGM--ERAGLLDINGQIFAEQGKALNAV 211 (398)
Q Consensus 166 ~~eal~dADiViitag~~rk~g~--~r~dll~~N~~i~~~i~~~i~~~ 211 (398)
..++++++|.|+.+++.....+. ....+...|..-...+.+.+.+.
T Consensus 122 l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~ 169 (367)
T PLN02686 122 LHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT 169 (367)
T ss_pred HHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhc
Confidence 23567889999987764322221 12344556777777788777764
No 280
>PRK09135 pteridine reductase; Provisional
Probab=95.14 E-value=0.15 Score=47.28 Aligned_cols=26 Identities=19% Similarity=0.142 Sum_probs=23.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.++|.|+||+|++|++++..|+..|.
T Consensus 6 ~~~vlItGa~g~iG~~l~~~l~~~g~ 31 (249)
T PRK09135 6 AKVALITGGARRIGAAIARTLHAAGY 31 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC
Confidence 36899999999999999999998764
No 281
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.49 Score=44.65 Aligned_cols=117 Identities=15% Similarity=0.045 Sum_probs=66.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC--cceEEEecC-----ccc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL--LREVKIGIN-----PYE 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~--~~~v~i~~~-----~~e 168 (398)
.+++.|+||+|.+|.+++..|+..|. .|.+ .+++.+.++....++....... .....++.. ..+
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~~G~-----~V~~----~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 77 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAAEGC-----HLHL----VARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAA 77 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-----EEEE----EeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence 46899999999999999999998775 2443 3566676666555555321000 001111110 112
Q ss_pred ccCCCcEEEEeCCCCC-CCC--Cchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 169 LFEDAEWALLIGAKPR-GPG--MERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 169 al~dADiViitag~~r-k~g--~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+...|++|.++|... .+- .+.. ..+..|.. +.+.+.+.+.+. ..+.+++++.
T Consensus 78 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~iss 140 (259)
T PRK06125 78 EAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR--GSGVIVNVIG 140 (259)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCcEEEEecC
Confidence 3467899999887642 221 1222 22444443 455555566653 3567776664
No 282
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.13 E-value=0.085 Score=47.87 Aligned_cols=75 Identities=21% Similarity=0.272 Sum_probs=45.3
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccc----------------hhhHHHHHHHHhhhcCCCcceEE
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERS----------------LQALEGVAMELEDSLFPLLREVK 161 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~----------------~~~l~g~a~DL~d~~~~~~~~v~ 161 (398)
||.|+|+ |.+|+.++..|+..|+- .++|+|.|.- ..+++..+..|+... |.. ++.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg------~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~ln-p~v-~i~ 71 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVG------NLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREIN-PFV-KIE 71 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCC------eEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHC-CCC-EEE
Confidence 6899995 99999999999999872 2334565541 233444444444332 221 221
Q ss_pred Ee-----c-CcccccCCCcEEEEeCC
Q 015897 162 IG-----I-NPYELFEDAEWALLIGA 181 (398)
Q Consensus 162 i~-----~-~~~eal~dADiViitag 181 (398)
.. . +..+.++++|+||.+..
T Consensus 72 ~~~~~~~~~~~~~~l~~~DlVi~~~d 97 (174)
T cd01487 72 AINIKIDENNLEGLFGDCDIVVEAFD 97 (174)
T ss_pred EEEeecChhhHHHHhcCCCEEEECCC
Confidence 11 1 12356889999998843
No 283
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=95.13 E-value=0.086 Score=51.08 Aligned_cols=110 Identities=17% Similarity=0.132 Sum_probs=60.7
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCccc----ccCCCc
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYE----LFEDAE 174 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~e----al~dAD 174 (398)
|.|+||+|++|++++..|...+.. .+.+ ++.....+.+. ++.... ....+........ .+.+.|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~----~v~~--~~~~~~~~~~~----~~~~~~--~~~d~~~~~~~~~~~~~~~~~~D 68 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT----DILV--VDNLRDGHKFL----NLADLV--IADYIDKEDFLDRLEKGAFGKIE 68 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc----eEEE--EecCCCchhhh----hhhhee--eeccCcchhHHHHHHhhccCCCC
Confidence 579999999999999999988741 1322 22111111111 111000 0001110000111 235899
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+||.+++.......+.......|..-...+.+.+.+. + ..+|.+|.
T Consensus 69 ~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~--~~~v~~SS 114 (314)
T TIGR02197 69 AIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-G--IPFIYASS 114 (314)
T ss_pred EEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-C--CcEEEEcc
Confidence 9999987643222344556778888888888888775 2 35666653
No 284
>PRK12827 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.46 Score=44.09 Aligned_cols=26 Identities=19% Similarity=0.387 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.++|.|+||+|.+|.+++..|+..+.
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~ 31 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGA 31 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC
Confidence 46899999999999999999998774
No 285
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.11 E-value=0.095 Score=48.83 Aligned_cols=44 Identities=20% Similarity=0.214 Sum_probs=32.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHH
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMEL 149 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL 149 (398)
||+.|+||+|.+|.+++..|+..|. .+.+ .+++.++++..+.++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~-----~v~~----~~r~~~~~~~~~~~~ 44 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH-----KVTL----VGARRDDLEVAAKEL 44 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHhc
Confidence 4799999999999999999998774 2443 366666666554443
No 286
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.10 E-value=0.5 Score=43.63 Aligned_cols=28 Identities=25% Similarity=0.141 Sum_probs=24.4
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.+.++|.|+||+|.+|.+++..|+..|.
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~ 30 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGA 30 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC
Confidence 3456999999999999999999998874
No 287
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.4 Score=45.69 Aligned_cols=46 Identities=22% Similarity=0.240 Sum_probs=34.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
.+++.|+||+|.+|.+++..|+..|. .|.+ .+++.+.++....++.
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~-----~V~~----~~r~~~~~~~~~~~l~ 52 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGA-----AVMI----VGRNPDKLAAAAEEIE 52 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-----eEEE----EeCCHHHHHHHHHHHH
Confidence 46899999999999999999999875 2543 2566566665555554
No 288
>PRK12744 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.4 Score=45.21 Aligned_cols=26 Identities=19% Similarity=0.165 Sum_probs=23.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.+++.|+||+|.+|.+++..|+..|.
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G~ 33 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQGA 33 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCC
Confidence 36899999999999999999998775
No 289
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.08 E-value=0.078 Score=49.36 Aligned_cols=102 Identities=18% Similarity=0.153 Sum_probs=56.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE--ecCcccccCCC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI--GINPYELFEDA 173 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i--~~~~~eal~dA 173 (398)
.+||.|||| |.+|...+..|+..|- .|.+ +.-+..+ .+. ++.+.. .+.. ..-.++++.++
T Consensus 10 ~k~vLVIGg-G~va~~ka~~Ll~~ga-----~V~V--Is~~~~~-~l~----~l~~~~-----~i~~~~~~~~~~~l~~a 71 (202)
T PRK06718 10 NKRVVIVGG-GKVAGRRAITLLKYGA-----HIVV--ISPELTE-NLV----KLVEEG-----KIRWKQKEFEPSDIVDA 71 (202)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC-----eEEE--EcCCCCH-HHH----HHHhCC-----CEEEEecCCChhhcCCc
Confidence 469999995 9999999999998773 2544 2212211 122 222111 1222 22346789999
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCC--chhHHHHHHH
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNP--CNTNALICLK 234 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP--~d~~t~~~~k 234 (398)
|+||.+-+.+ ..|..|. +..+ .+.++-++.+| ||...+...+
T Consensus 72 dlViaaT~d~-----------elN~~i~----~~a~----~~~lvn~~d~~~~~~f~~Pa~~~ 115 (202)
T PRK06718 72 FLVIAATNDP-----------RVNEQVK----EDLP----ENALFNVITDAESGNVVFPSALH 115 (202)
T ss_pred eEEEEcCCCH-----------HHHHHHH----HHHH----hCCcEEECCCCccCeEEEeeEEE
Confidence 9988875432 2243342 2221 24566667777 5555554433
No 290
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.07 E-value=0.11 Score=51.95 Aligned_cols=72 Identities=28% Similarity=0.318 Sum_probs=41.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
++||+|+||+|.+|..++..|...+.-. +.|..+-.+.+. +...++. . .++.+..-+..+++++|+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~----~~l~~l~s~~~~----g~~l~~~----g--~~i~v~d~~~~~~~~vDv 66 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPV----DKLRLLASARSA----GKELSFK----G--KELKVEDLTTFDFSGVDI 66 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCc----ceEEEEEccccC----CCeeeeC----C--ceeEEeeCCHHHHcCCCE
Confidence 5799999999999999999998754311 122222122211 1111111 1 233333223356789999
Q ss_pred EEEeCC
Q 015897 176 ALLIGA 181 (398)
Q Consensus 176 Viitag 181 (398)
||++.|
T Consensus 67 Vf~A~g 72 (334)
T PRK14874 67 ALFSAG 72 (334)
T ss_pred EEECCC
Confidence 999865
No 291
>PRK08291 ectoine utilization protein EutC; Validated
Probab=95.06 E-value=0.087 Score=52.68 Aligned_cols=74 Identities=22% Similarity=0.183 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHh-cCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCC
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAA-GEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDA 173 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~-~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dA 173 (398)
...+|+|+|+ |..|...+..+.. .++ . .|.+ + +++.++++..+.++++.. + ..+....+..+++.+|
T Consensus 131 ~~~~v~IiGa-G~~a~~~~~al~~~~~~-~---~V~v--~--~R~~~~a~~l~~~~~~~~-g--~~v~~~~d~~~al~~a 198 (330)
T PRK08291 131 DASRAAVIGA-GEQARLQLEALTLVRPI-R---EVRV--W--ARDAAKAEAYAADLRAEL-G--IPVTVARDVHEAVAGA 198 (330)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCC-C---EEEE--E--cCCHHHHHHHHHHHhhcc-C--ceEEEeCCHHHHHccC
Confidence 3569999995 9999988777764 332 2 3554 3 788889988888776422 2 2344556667889999
Q ss_pred cEEEEeC
Q 015897 174 EWALLIG 180 (398)
Q Consensus 174 DiViita 180 (398)
|+|+.+.
T Consensus 199 DiVi~aT 205 (330)
T PRK08291 199 DIIVTTT 205 (330)
T ss_pred CEEEEee
Confidence 9998764
No 292
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.05 E-value=0.11 Score=48.20 Aligned_cols=115 Identities=17% Similarity=0.189 Sum_probs=63.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCccc-------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYE------- 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~e------- 168 (398)
.+++.|+||+|.+|.+++..|+..+. .+.+ .+++.++++....++.... . .....++ +.+
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~-----~v~~----~~~~~~~~~~~~~~~~~~~-~-~~~~D~~--~~~~~~~~~~ 72 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGA-----IVGL----HGTRVEKLEALAAELGERV-K-IFPANLS--DRDEVKALGQ 72 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-----EEEE----EcCCHHHHHHHHHHhCCce-E-EEEccCC--CHHHHHHHHH
Confidence 46899999999999999999998874 2433 2556566655444432100 0 0011111 111
Q ss_pred ----ccCCCcEEEEeCCCCCC-CC--C---chhhhHHHHHHH----HHHHHHHHHHhcCCCeEEEEECCCc
Q 015897 169 ----LFEDAEWALLIGAKPRG-PG--M---ERAGLLDINGQI----FAEQGKALNAVASRNVKVIVVGNPC 225 (398)
Q Consensus 169 ----al~dADiViitag~~rk-~g--~---~r~dll~~N~~i----~~~i~~~i~~~a~p~a~vIvvtNP~ 225 (398)
.+...|+||.++|.... +- . +-...+..|..- ++.+.+.+.+ ...+.+|+++...
T Consensus 73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~~sS~~ 141 (245)
T PRK12936 73 KAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMR--RRYGRIINITSVV 141 (245)
T ss_pred HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHH--hCCCEEEEECCHH
Confidence 24568999999876421 11 1 112334555443 3344444443 2456777777543
No 293
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.00 E-value=0.35 Score=45.88 Aligned_cols=119 Identities=9% Similarity=-0.049 Sum_probs=65.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec---------C
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI---------N 165 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~---------~ 165 (398)
.+++.|+||+|.+|.+++..|+..|. .+.+ .+++.+.++....++........ ....++. .
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G~-----~vv~----~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 80 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAGA-----TIVF----NDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQ 80 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-----eEEE----EeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 46899999999999999999998874 2443 25666666655555543210000 0111110 0
Q ss_pred cccccCCCcEEEEeCCCCC-CC-CCchh----hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECCCc
Q 015897 166 PYELFEDAEWALLIGAKPR-GP-GMERA----GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGNPC 225 (398)
Q Consensus 166 ~~eal~dADiViitag~~r-k~-g~~r~----dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtNP~ 225 (398)
..+.+..-|++|.++|... .+ ..... ..+..|.. +.+.+.+.+.+ ...+.||+++...
T Consensus 81 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~g~iv~isS~~ 148 (265)
T PRK07097 81 IEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIK--KGHGKIINICSMM 148 (265)
T ss_pred HHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh--cCCcEEEEEcCcc
Confidence 1122345799999887532 11 11111 22334432 34445555555 2467777777643
No 294
>PRK06924 short chain dehydrogenase; Provisional
Probab=94.96 E-value=0.05 Score=50.99 Aligned_cols=26 Identities=12% Similarity=0.206 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
|++|.|+||+|.+|+.++..|+..|.
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~ 26 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGT 26 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCC
Confidence 45799999999999999999998875
No 295
>PRK08324 short chain dehydrogenase; Validated
Probab=94.95 E-value=0.12 Score=56.65 Aligned_cols=116 Identities=17% Similarity=0.111 Sum_probs=64.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEec--Cccc-----
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGI--NPYE----- 168 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~--~~~e----- 168 (398)
++|.|+||+|.||..++..|+..|. .|.+ .|++.+.++....++.... .. .....++. ...+
T Consensus 423 k~vLVTGasggIG~~la~~L~~~Ga-----~Vvl----~~r~~~~~~~~~~~l~~~~-~v~~v~~Dvtd~~~v~~~~~~~ 492 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEGA-----CVVL----ADLDEEAAEAAAAELGGPD-RALGVACDVTDEAAVQAAFEEA 492 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCcC-----EEEE----EeCCHHHHHHHHHHHhccC-cEEEEEecCCCHHHHHHHHHHH
Confidence 6899999999999999999998874 2443 3677676665555554310 00 00111111 0011
Q ss_pred --ccCCCcEEEEeCCCCCCC---CCchh---hhHHHH----HHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 169 --LFEDAEWALLIGAKPRGP---GMERA---GLLDIN----GQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 169 --al~dADiViitag~~rk~---g~~r~---dll~~N----~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+.|+||.++|..... ..+.. ..+..| ..+++...+.+++. ..++.+|+++-
T Consensus 493 ~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~~g~iV~vsS 558 (681)
T PRK08324 493 ALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQ-GLGGSIVFIAS 558 (681)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCcEEEEECC
Confidence 134689999998864321 11111 123334 33445555555553 23467776664
No 296
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=94.95 E-value=0.13 Score=53.94 Aligned_cols=101 Identities=15% Similarity=0.182 Sum_probs=60.6
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcc---cccCCCc
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPY---ELFEDAE 174 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~---eal~dAD 174 (398)
+|+||| .|.+|.+++..|+..|. +|.+ + |++.++++....+.... ..+....+.. +.++++|
T Consensus 1 ~IG~IG-LG~MG~~mA~nL~~~G~-----~V~v--~--drt~~~~~~l~~~~~~g-----~~~~~~~s~~e~v~~l~~~d 65 (467)
T TIGR00873 1 DIGVIG-LAVMGSNLALNMADHGF-----TVSV--Y--NRTPEKTDEFLAEHAKG-----KKIVGAYSIEEFVQSLERPR 65 (467)
T ss_pred CEEEEe-eHHHHHHHHHHHHhcCC-----eEEE--E--eCCHHHHHHHHhhccCC-----CCceecCCHHHHHhhcCCCC
Confidence 489999 69999999999999885 3543 3 67777766444321100 0111222222 2446789
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC--CchhH
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN--PCNTN 228 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN--P~d~~ 228 (398)
+|+++... .+.+.++...+..+..++.+||..+| |.++.
T Consensus 66 vIil~v~~---------------~~~v~~Vi~~l~~~L~~g~iIID~gns~~~~t~ 106 (467)
T TIGR00873 66 KIMLMVKA---------------GAPVDAVINQLLPLLEKGDIIIDGGNSHYPDTE 106 (467)
T ss_pred EEEEECCC---------------cHHHHHHHHHHHhhCCCCCEEEECCCcCHHHHH
Confidence 88887421 13444444555554457888999987 45543
No 297
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=94.93 E-value=0.073 Score=53.89 Aligned_cols=112 Identities=15% Similarity=0.195 Sum_probs=63.2
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEecCcccccCC
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGINPYELFED 172 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~~~~eal~d 172 (398)
.++.++.|+||+|++|.+++..|+..+.. ..+.++|.-.........-.++......+ ..++.-......++.+
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~-----~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~ 76 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELK-----LEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQG 76 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccc-----cEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccC
Confidence 34679999999999999999999998852 23333433221122221212110000000 0122222346789999
Q ss_pred CcEEEEeCCCC--CCCCCchhhhHHHHHHHHHHHHHHHHHh
Q 015897 173 AEWALLIGAKP--RGPGMERAGLLDINGQIFAEQGKALNAV 211 (398)
Q Consensus 173 ADiViitag~~--rk~g~~r~dll~~N~~i~~~i~~~i~~~ 211 (398)
+ .|++++..+ +..-..|......|++--+.+.+.+.+.
T Consensus 77 ~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~ 116 (361)
T KOG1430|consen 77 A-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL 116 (361)
T ss_pred c-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh
Confidence 9 666654332 2222246666777887777788777774
No 298
>PRK08618 ornithine cyclodeaminase; Validated
Probab=94.92 E-value=0.081 Score=52.76 Aligned_cols=74 Identities=16% Similarity=0.231 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHh-cCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCC
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAA-GEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDA 173 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~-~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dA 173 (398)
...+++||| +|.+|...+..++. .++ . .|.+ .+++.++++..+.++.+.. + .++....+..+++.+|
T Consensus 126 ~~~~v~iiG-aG~~a~~~~~al~~~~~~-~---~v~v----~~r~~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~~~a 193 (325)
T PRK08618 126 DAKTLCLIG-TGGQAKGQLEAVLAVRDI-E---RVRV----YSRTFEKAYAFAQEIQSKF-N--TEIYVVNSADEAIEEA 193 (325)
T ss_pred CCcEEEEEC-CcHHHHHHHHHHHhcCCc-c---EEEE----ECCCHHHHHHHHHHHHHhc-C--CcEEEeCCHHHHHhcC
Confidence 357899999 59999887776654 332 2 2544 3788888888887776421 2 2344455667889999
Q ss_pred cEEEEeC
Q 015897 174 EWALLIG 180 (398)
Q Consensus 174 DiViita 180 (398)
|+|+.+-
T Consensus 194 DiVi~aT 200 (325)
T PRK08618 194 DIIVTVT 200 (325)
T ss_pred CEEEEcc
Confidence 9999864
No 299
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=94.92 E-value=0.25 Score=46.79 Aligned_cols=102 Identities=20% Similarity=0.236 Sum_probs=58.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccc----hhh---HHHHHHHHhhhcCCCcceEEEecCccc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERS----LQA---LEGVAMELEDSLFPLLREVKIGINPYE 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~----~~~---l~g~a~DL~d~~~~~~~~v~i~~~~~e 168 (398)
-.||.|+|| |.+|..++..|...|+-. +.|.+ + |++ .++ +.....++.+.. .. .. ...+..+
T Consensus 25 ~~rvlvlGA-GgAg~aiA~~L~~~G~~~--~~i~i--v--dr~gl~~~~r~~~L~~~~~~la~~~-~~-~~--~~~~l~~ 93 (226)
T cd05311 25 EVKIVINGA-GAAGIAIARLLLAAGAKP--ENIVV--V--DSKGVIYEGREDDLNPDKNEIAKET-NP-EK--TGGTLKE 93 (226)
T ss_pred CCEEEEECc-hHHHHHHHHHHHHcCcCc--ceEEE--E--eCCCccccccchhhhHHHHHHHHHh-cc-Cc--ccCCHHH
Confidence 369999995 999999999999887631 02443 4 554 232 222223332211 10 01 1123458
Q ss_pred ccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchh
Q 015897 169 LFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNT 227 (398)
Q Consensus 169 al~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~ 227 (398)
+++++|++|-+.+ +|+-. .+..+.+ +++.+|+.++||...
T Consensus 94 ~l~~~dvlIgaT~----~G~~~-----------~~~l~~m----~~~~ivf~lsnP~~e 133 (226)
T cd05311 94 ALKGADVFIGVSR----PGVVK-----------KEMIKKM----AKDPIVFALANPVPE 133 (226)
T ss_pred HHhcCCEEEeCCC----CCCCC-----------HHHHHhh----CCCCEEEEeCCCCCc
Confidence 8899999998754 34311 1222222 256777788899643
No 300
>PRK07062 short chain dehydrogenase; Provisional
Probab=94.91 E-value=0.52 Score=44.56 Aligned_cols=114 Identities=13% Similarity=0.086 Sum_probs=65.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEE-Eec--Ccc------
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVK-IGI--NPY------ 167 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~-i~~--~~~------ 167 (398)
+.+.|+||+|.+|.+++..|+..|. .|.+ .+++.++++....++.... +- .++. +.. .++
T Consensus 9 k~~lItGas~giG~~ia~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~v~~~ 77 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEAGA-----SVAI----CGRDEERLASAEARLREKF-PG-ARLLAARCDVLDEADVAAF 77 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-----eEEE----EeCCHHHHHHHHHHHHhhC-CC-ceEEEEEecCCCHHHHHHH
Confidence 5799999999999999999998875 2443 3667777776666665321 10 1111 111 112
Q ss_pred -----cccCCCcEEEEeCCCCCC-C--CCchh---hhHHHH----HHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 168 -----ELFEDAEWALLIGAKPRG-P--GMERA---GLLDIN----GQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 168 -----eal~dADiViitag~~rk-~--g~~r~---dll~~N----~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+.+...|++|..+|.... + ..+.. ..+..| ....+.+.+.+++. ..+.|++++-
T Consensus 78 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~isS 146 (265)
T PRK07062 78 AAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS--AAASIVCVNS 146 (265)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc--CCcEEEEecc
Confidence 224567999999886431 1 11111 122333 33455666666653 3567777664
No 301
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.91 E-value=0.17 Score=47.25 Aligned_cols=27 Identities=11% Similarity=0.127 Sum_probs=23.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
+.++|.|+||+|.+|.+++..|+..|.
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~ 30 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGA 30 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC
Confidence 346899999999999999999998874
No 302
>PRK12743 oxidoreductase; Provisional
Probab=94.89 E-value=0.65 Score=43.79 Aligned_cols=115 Identities=10% Similarity=0.083 Sum_probs=61.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ec--Ccc------
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GI--NPY------ 167 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~--~~~------ 167 (398)
.+|.|+||+|.+|.+++..|+..|. .+.+. . ..+.+.++....++.... .++.+ .. .+.
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~-----~V~~~-~--~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~ 70 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGF-----DIGIT-W--HSDEEGAKETAEEVRSHG----VRAEIRQLDLSDLPEGAQA 70 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-----EEEEE-e--CCChHHHHHHHHHHHhcC----CceEEEEccCCCHHHHHHH
Confidence 4799999999999999999999875 24431 1 334445554445544221 11111 11 111
Q ss_pred -----cccCCCcEEEEeCCCCCC-C--CCch---hhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 168 -----ELFEDAEWALLIGAKPRG-P--GMER---AGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 168 -----eal~dADiViitag~~rk-~--g~~r---~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
+.+...|++|..+|.... + ..+. ...+..|.. +++...+.+.+. ..++.+|+++.-
T Consensus 71 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~g~ii~isS~ 141 (256)
T PRK12743 71 LDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQ-GQGGRIINITSV 141 (256)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEEEeec
Confidence 123457999998876421 1 1111 123444433 334444444442 235777777753
No 303
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=94.88 E-value=0.5 Score=44.49 Aligned_cols=26 Identities=27% Similarity=0.238 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.+++.|+||+|.+|.+++..|+..|.
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~ 33 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGA 33 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC
Confidence 35899999999999999999998875
No 304
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=94.87 E-value=0.097 Score=51.75 Aligned_cols=75 Identities=19% Similarity=0.172 Sum_probs=55.1
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCC
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDA 173 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dA 173 (398)
....+++||| +|..|...+..++.-.-+. +|.+ + +++.++++..+.++.+.. ..++.+..+..+++.+|
T Consensus 115 ~da~~l~iiG-aG~QA~~~~~a~~~v~~i~---~v~v--~--~r~~~~a~~f~~~~~~~~---~~~v~~~~~~~eav~~a 183 (301)
T PRK06407 115 KNVENFTIIG-SGFQAETQLEGMASVYNPK---RIRV--Y--SRNFDHARAFAERFSKEF---GVDIRPVDNAEAALRDA 183 (301)
T ss_pred cCCcEEEEEC-CcHHHHHHHHHHHhcCCCC---EEEE--E--CCCHHHHHHHHHHHHHhc---CCcEEEeCCHHHHHhcC
Confidence 3467999999 5999998877776543222 3544 3 788899998988887532 22566667889999999
Q ss_pred cEEEEe
Q 015897 174 EWALLI 179 (398)
Q Consensus 174 DiViit 179 (398)
|+|+.+
T Consensus 184 DIV~ta 189 (301)
T PRK06407 184 DTITSI 189 (301)
T ss_pred CEEEEe
Confidence 999875
No 305
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.86 E-value=0.63 Score=43.41 Aligned_cols=76 Identities=20% Similarity=0.240 Sum_probs=48.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe-c--Ccc------
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG-I--NPY------ 167 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~-~--~~~------ 167 (398)
+++.|+||+|.+|.+++..|+..+. .+.+ .+++.++++....++.... +. .++.+. . .+.
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~-----~v~~----~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~~~ 71 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGR-----DLAL----CARRTDRLEELKAELLARY-PG-IKVAVAALDVNDHDQVFEV 71 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC-----EEEE----EeCCHHHHHHHHHHHHhhC-CC-ceEEEEEcCCCCHHHHHHH
Confidence 4799999999999999999998874 2443 3566676666666554321 10 112111 1 111
Q ss_pred -----cccCCCcEEEEeCCCC
Q 015897 168 -----ELFEDAEWALLIGAKP 183 (398)
Q Consensus 168 -----eal~dADiViitag~~ 183 (398)
+.+...|+||..+|..
T Consensus 72 ~~~~~~~~~~id~vi~~ag~~ 92 (248)
T PRK08251 72 FAEFRDELGGLDRVIVNAGIG 92 (248)
T ss_pred HHHHHHHcCCCCEEEECCCcC
Confidence 2345689999998865
No 306
>PRK07576 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.35 Score=46.04 Aligned_cols=46 Identities=20% Similarity=0.266 Sum_probs=33.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
.++|.|+||+|.||.+++..|+..|. .|.+ .+++.+.++....++.
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~ 54 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARAGA-----NVAV----ASRSQEKVDAAVAQLQ 54 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHH
Confidence 46899999999999999999998764 2443 3566666655555554
No 307
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.098 Score=50.07 Aligned_cols=113 Identities=12% Similarity=0.018 Sum_probs=59.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec---------Ccc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI---------NPY 167 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~---------~~~ 167 (398)
++|.|+||+|.+|.+++..|+..+. .|.+ .+++.+.++.....+.... .. ....++. ...
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g~-----~V~~----~~r~~~~~~~~~~~~~~~~-~~-~~~D~~~~~~~~~~~~~~~ 72 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERGD-----RVVA----TARDTATLADLAEKYGDRL-LP-LALDVTDRAAVFAAVETAV 72 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-----EEEE----EECCHHHHHHHHHhccCCe-eE-EEccCCCHHHHHHHHHHHH
Confidence 4799999999999999999998774 2433 3566555543322211110 00 0111110 011
Q ss_pred cccCCCcEEEEeCCCCCC-C--CCch---hhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEEC
Q 015897 168 ELFEDAEWALLIGAKPRG-P--GMER---AGLLDINGQ----IFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 168 eal~dADiViitag~~rk-~--g~~r---~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
+.+...|.||.++|.... + ..+. .+.+..|.. +.+.+.+.+++. ..+.+|+++
T Consensus 73 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~vs 135 (275)
T PRK08263 73 EHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ--RSGHIIQIS 135 (275)
T ss_pred HHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCEEEEEc
Confidence 223467999999886521 1 1111 233455544 355555556663 344566665
No 308
>PRK06500 short chain dehydrogenase; Provisional
Probab=94.81 E-value=0.15 Score=47.61 Aligned_cols=103 Identities=17% Similarity=0.115 Sum_probs=56.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec---------Ccc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI---------NPY 167 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~---------~~~ 167 (398)
++|.|+||+|.+|.+++..|+..|. .+.+ ++++++.++....++.... . .....+.. .-.
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~-----~v~~----~~r~~~~~~~~~~~~~~~~-~-~~~~D~~~~~~~~~~~~~~~ 75 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGA-----RVAI----TGRDPASLEAARAELGESA-L-VIRADAGDVAAQKALAQALA 75 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-----EEEE----ecCCHHHHHHHHHHhCCce-E-EEEecCCCHHHHHHHHHHHH
Confidence 5899999999999999999998874 2433 3566555544433331100 0 00011110 001
Q ss_pred cccCCCcEEEEeCCCCCC-C--CCchh---hhHHHHHHHHHHHHHHHHH
Q 015897 168 ELFEDAEWALLIGAKPRG-P--GMERA---GLLDINGQIFAEQGKALNA 210 (398)
Q Consensus 168 eal~dADiViitag~~rk-~--g~~r~---dll~~N~~i~~~i~~~i~~ 210 (398)
+.+...|+||..+|.... + ..+.. ..+..|..-...+.+.+..
T Consensus 76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 124 (249)
T PRK06500 76 EAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLP 124 (249)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 223568999998876421 1 11222 3456666555555555543
No 309
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=94.81 E-value=0.12 Score=50.30 Aligned_cols=94 Identities=12% Similarity=0.127 Sum_probs=55.7
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccC-CCcEEE
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFE-DAEWAL 177 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~-dADiVi 177 (398)
|+|.||+|+||++|...|...+. +|.+ +-++..+.+..... .+..-....+... ++|+||
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh-----~v~i----ltR~~~~~~~~~~~----------~v~~~~~~~~~~~~~~DavI 61 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH-----QVTI----LTRRPPKASQNLHP----------NVTLWEGLADALTLGIDAVI 61 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC-----eEEE----EEcCCcchhhhcCc----------cccccchhhhcccCCCCEEE
Confidence 57999999999999999988764 3543 23444443321110 1111111122222 799999
Q ss_pred EeCCCCC--CCC--CchhhhHHHHHHHHHHHHHHHHHh
Q 015897 178 LIGAKPR--GPG--MERAGLLDINGQIFAEQGKALNAV 211 (398)
Q Consensus 178 itag~~r--k~g--~~r~dll~~N~~i~~~i~~~i~~~ 211 (398)
..+|.|- +.. .....+....+..-+.+.+.|.+.
T Consensus 62 NLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~ 99 (297)
T COG1090 62 NLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAAS 99 (297)
T ss_pred ECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 9999872 212 223445555566777777777754
No 310
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=94.80 E-value=0.11 Score=49.36 Aligned_cols=45 Identities=20% Similarity=0.239 Sum_probs=33.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHH
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMEL 149 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL 149 (398)
.+++.|+||+|.||.+++..|+..|. .|.+ .+++++.++....++
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~ 50 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEGA-----RVAV----LERSAEKLASLRQRF 50 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHh
Confidence 46899999999999999999998875 2443 366666665544443
No 311
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.79 E-value=0.51 Score=43.85 Aligned_cols=46 Identities=22% Similarity=0.184 Sum_probs=33.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
..++.|+||+|.+|..++..|+..|. .+.+ .++++++++....++.
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~G~-----~vi~----~~r~~~~~~~~~~~~~ 50 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKGA-----KLAL----IDLNQEKLEEAVAECG 50 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHH
Confidence 45899999999999999999998764 2433 3566666665555554
No 312
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=94.79 E-value=0.28 Score=48.52 Aligned_cols=107 Identities=11% Similarity=-0.012 Sum_probs=56.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccch-----hhHHHHHHHHhhhcCCC-cceEEEec--Ccc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSL-----QALEGVAMELEDSLFPL-LREVKIGI--NPY 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~-----~~l~g~a~DL~d~~~~~-~~~v~i~~--~~~ 167 (398)
.+||.|+||+|++|++++..|+..|. .|.+ + +++. +.++....+........ .....++. ...
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G~-----~V~~--~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 76 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKGY-----EVHG--I--IRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLR 76 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCC-----EEEE--E--ecccccccccchhhhccccccccCceEEEEecCCCHHHHH
Confidence 46899999999999999999998875 2432 2 2221 12221111100000000 00111111 112
Q ss_pred cccCC--CcEEEEeCCCCCCCC--CchhhhHHHHHHHHHHHHHHHHHh
Q 015897 168 ELFED--AEWALLIGAKPRGPG--MERAGLLDINGQIFAEQGKALNAV 211 (398)
Q Consensus 168 eal~d--ADiViitag~~rk~g--~~r~dll~~N~~i~~~i~~~i~~~ 211 (398)
+.+++ .|+||.+++...... ......+..|+.-...+.+.+.+.
T Consensus 77 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~ 124 (340)
T PLN02653 77 RWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH 124 (340)
T ss_pred HHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh
Confidence 33443 599999988643221 122334566777777777777775
No 313
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.78 E-value=0.41 Score=45.09 Aligned_cols=117 Identities=11% Similarity=0.070 Sum_probs=63.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEecC---------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGIN--------- 165 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~~--------- 165 (398)
.++|.|+||+|.+|.+++..|+..|. .+.+ ++++.+.++..+.++.+...... ....++..
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G~-----~vv~----~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~ 81 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAGA-----SVVV----SDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF 81 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-----eEEE----EeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 46999999999999999999998874 2433 35666666666666654211100 01111110
Q ss_pred cccccCCCcEEEEeCCCCCC--CCCchhh---hHHHHHHHH----HHHHHHHHHhcCCCeEEEEECC
Q 015897 166 PYELFEDAEWALLIGAKPRG--PGMERAG---LLDINGQIF----AEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 166 ~~eal~dADiViitag~~rk--~g~~r~d---ll~~N~~i~----~~i~~~i~~~a~p~a~vIvvtN 223 (398)
..+.+...|++|.++|.... ...+..+ .+..|..-. +.+.+.+.+. ..+.+|+++-
T Consensus 82 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~isS 146 (255)
T PRK06113 82 ALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN--GGGVILTITS 146 (255)
T ss_pred HHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc--CCcEEEEEec
Confidence 11223457999998875321 1222222 245554433 3333334342 3456666654
No 314
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=94.77 E-value=0.57 Score=43.69 Aligned_cols=46 Identities=20% Similarity=0.161 Sum_probs=32.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
++|.|+||+|.+|+.++..|+..+. .+.+. ..++.+.++....++.
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~-----~v~~~---~~~~~~~~~~~~~~~~ 48 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW-----SVGIN---YARDAAAAEETADAVR 48 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC-----EEEEE---eCCCHHHHHHHHHHHH
Confidence 4899999999999999999998774 24331 1345566665555554
No 315
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.76 E-value=0.11 Score=52.01 Aligned_cols=73 Identities=25% Similarity=0.263 Sum_probs=43.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--CcccccCCC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--NPYELFEDA 173 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~~~eal~dA 173 (398)
++||+|+||+|.||+.++..|..... .- ..+.++-+.++..+ .+.++..-. ..+-. -+..+++++
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f-~~---~~~~~~AS~rSaG~---~~~~f~~~~------~~v~~~~~~~~~~~~~ 67 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHF-PF---EELVLLASARSAGK---KYIEFGGKS------IGVPEDAADEFVFSDV 67 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCC-Cc---ceEEEEecccccCC---ccccccCcc------ccCccccccccccccC
Confidence 46899999999999999999988532 21 11223323332111 113322211 11111 466778899
Q ss_pred cEEEEeCC
Q 015897 174 EWALLIGA 181 (398)
Q Consensus 174 DiViitag 181 (398)
|+|++++|
T Consensus 68 Divf~~ag 75 (334)
T COG0136 68 DIVFFAAG 75 (334)
T ss_pred CEEEEeCc
Confidence 99999876
No 316
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.71 E-value=0.53 Score=43.92 Aligned_cols=74 Identities=18% Similarity=0.102 Sum_probs=45.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-e--cCc-------
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-G--INP------- 166 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~--~~~------- 166 (398)
++|.|+||+|.+|.+++..|+..|. .+.+ .+++.+..+....++.... .++.. . ..+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-----~v~~----~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~ 68 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-----NVVV----NDLGEAGAEAAAKVATDAG----GSVIYLVADVTKEDEIADM 68 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHhcC----CceEEEECCCCCHHHHHHH
Confidence 4799999999999999999998775 2443 3566555554444443211 11111 1 111
Q ss_pred ----ccccCCCcEEEEeCCCC
Q 015897 167 ----YELFEDAEWALLIGAKP 183 (398)
Q Consensus 167 ----~eal~dADiViitag~~ 183 (398)
.+.+.+.|+||..++..
T Consensus 69 ~~~~~~~~~~~d~vi~~a~~~ 89 (255)
T TIGR01963 69 IAAAAAEFGGLDILVNNAGIQ 89 (255)
T ss_pred HHHHHHhcCCCCEEEECCCCC
Confidence 22356789999988753
No 317
>PRK06141 ornithine cyclodeaminase; Validated
Probab=94.70 E-value=0.12 Score=51.28 Aligned_cols=73 Identities=16% Similarity=0.162 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHh-cCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCC
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAA-GEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDA 173 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~-~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dA 173 (398)
+..+|+||| +|.+|...+..++. .+. . .|.+ + +++.++++..+.++.+.. ..+....+..+++++|
T Consensus 124 ~~~~v~iiG-~G~~a~~~~~al~~~~~~-~---~V~V--~--~Rs~~~a~~~a~~~~~~g----~~~~~~~~~~~av~~a 190 (314)
T PRK06141 124 DASRLLVVG-TGRLASLLALAHASVRPI-K---QVRV--W--GRDPAKAEALAAELRAQG----FDAEVVTDLEAAVRQA 190 (314)
T ss_pred CCceEEEEC-CcHHHHHHHHHHHhcCCC-C---EEEE--E--cCCHHHHHHHHHHHHhcC----CceEEeCCHHHHHhcC
Confidence 457999999 59999999886665 443 2 2544 3 788888888888876421 1344555677899999
Q ss_pred cEEEEeC
Q 015897 174 EWALLIG 180 (398)
Q Consensus 174 DiViita 180 (398)
|+|+.+-
T Consensus 191 DIVi~aT 197 (314)
T PRK06141 191 DIISCAT 197 (314)
T ss_pred CEEEEee
Confidence 9997653
No 318
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.69 E-value=0.16 Score=50.55 Aligned_cols=69 Identities=17% Similarity=0.217 Sum_probs=44.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCce-EEEecccccchhhHHHHHHHHhhhcCCC-cceEEEecCcccccCCC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPI-ALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGINPYELFEDA 173 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i-~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~~~~eal~dA 173 (398)
.++|+| ||+|.||..+...|-.++. ++ .|+|+.+.. +..| +.. .+ ..++.+..-..+++++.
T Consensus 3 ~~~iAi-GATg~VG~~~l~~Leer~f-----pv~~l~l~~s~~---~s~g------k~i-~f~g~~~~V~~l~~~~f~~v 66 (322)
T PRK06901 3 TLNIAI-AAEFELSEKLLEALEQSDL-----EIEQISIVEIEP---FGEE------QGI-RFNNKAVEQIAPEEVEWADF 66 (322)
T ss_pred cceEEE-ecCcHHHHHHHHHHHhcCC-----chhheeeccccc---ccCC------CEE-EECCEEEEEEECCccCcccC
Confidence 468999 9999999999998888765 22 233443220 1111 111 12 23555655567799999
Q ss_pred cEEEEeCC
Q 015897 174 EWALLIGA 181 (398)
Q Consensus 174 DiViitag 181 (398)
|++++ +|
T Consensus 67 Dia~f-ag 73 (322)
T PRK06901 67 NYVFF-AG 73 (322)
T ss_pred CEEEE-cC
Confidence 99999 65
No 319
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=94.69 E-value=0.1 Score=51.69 Aligned_cols=105 Identities=15% Similarity=0.135 Sum_probs=57.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccch--hhHHHHHHHHhhhcCCC-cceEEEec--CcccccC
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSL--QALEGVAMELEDSLFPL-LREVKIGI--NPYELFE 171 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~--~~l~g~a~DL~d~~~~~-~~~v~i~~--~~~eal~ 171 (398)
|||.|+||+|+||++++..|+..|. .+++ . +|... ...+ ...++.... .. .....++. +..++++
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~-----~~v~-~--~~~~~~~~~~~-~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~ 70 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQ-----DSVV-N--VDKLTYAGNLE-SLADVSDSE-RYVFEHADICDRAELDRIFA 70 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCC-----CeEE-E--ecCCCccchHH-HHHhcccCC-ceEEEEecCCCHHHHHHHHH
Confidence 4899999999999999999998764 1221 1 23211 1111 111111000 00 00111111 1123343
Q ss_pred --CCcEEEEeCCCCCC--CCCchhhhHHHHHHHHHHHHHHHHHh
Q 015897 172 --DAEWALLIGAKPRG--PGMERAGLLDINGQIFAEQGKALNAV 211 (398)
Q Consensus 172 --dADiViitag~~rk--~g~~r~dll~~N~~i~~~i~~~i~~~ 211 (398)
+.|+||.+++.... +.....++...|+.-...+.+.+.++
T Consensus 71 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~ 114 (352)
T PRK10084 71 QHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNY 114 (352)
T ss_pred hcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHh
Confidence 47999999876421 12233567888888888888887763
No 320
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.69 E-value=0.31 Score=45.10 Aligned_cols=46 Identities=11% Similarity=0.173 Sum_probs=33.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
..+|.|+||+|.+|+.++..|+..|. .|.+ .+++++.++....++.
T Consensus 5 ~~~vlItGa~g~iG~~~a~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~ 50 (238)
T PRK05786 5 GKKVAIIGVSEGLGYAVAYFALKEGA-----QVCI----NSRNENKLKRMKKTLS 50 (238)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHH
Confidence 35899999999999999999998775 2433 3566666654444443
No 321
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=94.69 E-value=0.11 Score=56.59 Aligned_cols=114 Identities=20% Similarity=0.128 Sum_probs=62.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccch--hhHHHHHHHHhhhcCCCcceEEEe-cC--cc--
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSL--QALEGVAMELEDSLFPLLREVKIG-IN--PY-- 167 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~--~~l~g~a~DL~d~~~~~~~~v~i~-~~--~~-- 167 (398)
+++||.|+||+|+||++++..|+..+. + ..|. .+ |+.. +.+. .+.... . ...+.+. .| +.
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~-~--~~V~--~~--d~~~~~~~~~----~l~~~~-~-~~~v~~~~~Dl~d~~~ 71 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYP-D--YKIV--VL--DKLDYCSNLK----NLNPSK-S-SPNFKFVKGDIASADL 71 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCC-C--CEEE--EE--eCCCccchhh----hhhhcc-c-CCCeEEEECCCCChHH
Confidence 467999999999999999999998642 1 0232 12 3321 1111 111000 0 0112111 11 11
Q ss_pred -c-c--cCCCcEEEEeCCCCCCCC--CchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 168 -E-L--FEDAEWALLIGAKPRGPG--MERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 168 -e-a--l~dADiViitag~~rk~g--~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
+ . ..+.|+||.+++...... ....+....|+.-...+.+.+++. +.-..+|.+|
T Consensus 72 ~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~vkr~I~~S 131 (668)
T PLN02260 72 VNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVS 131 (668)
T ss_pred HHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEc
Confidence 1 1 258999999987643211 123456678888888888888775 3234566665
No 322
>PRK08862 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.65 Score=43.48 Aligned_cols=118 Identities=9% Similarity=-0.014 Sum_probs=65.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec---------C
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI---------N 165 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~---------~ 165 (398)
.+.+.|+||++.+|..++..|+..|. .|.+ .+++++.++..+.++........ ....+.. .
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~G~-----~V~~----~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARLGA-----TLIL----CDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDA 75 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHCCC-----EEEE----EcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHH
Confidence 35899999999999999999999875 2443 36777777766666543210000 0011110 0
Q ss_pred cccccC-CCcEEEEeCCCCCCCC----Cchhh---hHHHH----HHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 166 PYELFE-DAEWALLIGAKPRGPG----MERAG---LLDIN----GQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 166 ~~eal~-dADiViitag~~rk~g----~~r~d---ll~~N----~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
-.+.+. .-|++|..+|....++ .+..+ .+..| ..+.+...+.+.+. ..++.||+++.
T Consensus 76 ~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~-~~~g~Iv~isS 144 (227)
T PRK08862 76 IEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKR-NKKGVIVNVIS 144 (227)
T ss_pred HHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCceEEEEec
Confidence 112334 6899999876422111 11111 22223 23445556666653 33577777764
No 323
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=94.67 E-value=0.34 Score=49.49 Aligned_cols=75 Identities=12% Similarity=0.255 Sum_probs=50.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHH--------H----HhhhcCCCcceEEEe
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAM--------E----LEDSLFPLLREVKIG 163 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~--------D----L~d~~~~~~~~v~i~ 163 (398)
..+|+||| .|.||-.+|-.++..|. ++ .+.|+|+.+.+..-. + +.... ..++.+.+
T Consensus 9 ~~~I~ViG-LGYVGLPlA~~fA~~G~-----~V----iG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v--~~g~lraT 76 (436)
T COG0677 9 SATIGVIG-LGYVGLPLAAAFASAGF-----KV----IGVDINQKKVDKLNRGESYIEEPDLDEVVKEAV--ESGKLRAT 76 (436)
T ss_pred ceEEEEEc-cccccHHHHHHHHHcCC-----ce----EeEeCCHHHHHHHhCCcceeecCcHHHHHHHHH--hcCCceEe
Confidence 37999999 79999999999999875 12 245777666643210 0 11111 11345555
Q ss_pred cCcccccCCCcEEEEeCCCC
Q 015897 164 INPYELFEDAEWALLIGAKP 183 (398)
Q Consensus 164 ~~~~eal~dADiViitag~~ 183 (398)
.+.+.++.||++|++.-.|
T Consensus 77 -td~~~l~~~dv~iI~VPTP 95 (436)
T COG0677 77 -TDPEELKECDVFIICVPTP 95 (436)
T ss_pred -cChhhcccCCEEEEEecCC
Confidence 4677888999999987665
No 324
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=94.66 E-value=0.12 Score=51.73 Aligned_cols=74 Identities=22% Similarity=0.267 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHh-cCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCC
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAA-GEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDA 173 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~-~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dA 173 (398)
...+++||| +|..|...+..|+. .++ . .|.+ + +++.++++..+.++.+.. + .++....+.++++.+|
T Consensus 128 ~~~~v~iiG-aG~qA~~~~~al~~~~~i-~---~v~V--~--~R~~~~a~~~a~~~~~~~-g--~~v~~~~~~~~av~~a 195 (326)
T TIGR02992 128 DSSVVAIFG-AGMQARLQLEALTLVRDI-R---SARI--W--ARDSAKAEALALQLSSLL-G--IDVTAATDPRAAMSGA 195 (326)
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHHhCCc-c---EEEE--E--CCCHHHHHHHHHHHHhhc-C--ceEEEeCCHHHHhccC
Confidence 456999999 59999998888874 443 2 2544 3 788888888888875421 2 2344455667889999
Q ss_pred cEEEEeC
Q 015897 174 EWALLIG 180 (398)
Q Consensus 174 DiViita 180 (398)
|+|+.+-
T Consensus 196 DiVvtaT 202 (326)
T TIGR02992 196 DIIVTTT 202 (326)
T ss_pred CEEEEec
Confidence 9999864
No 325
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=94.65 E-value=0.15 Score=51.18 Aligned_cols=65 Identities=15% Similarity=0.074 Sum_probs=41.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
.+||+||| .|++|.+++..|...|+ .+.+ . +....+....+.+ + . +.. .+..+++++||+
T Consensus 17 gktIgIIG-~GsmG~AlA~~L~~sG~-----~Vvv--~--~r~~~~s~~~A~~--~---G----~~~-~s~~eaa~~ADV 76 (330)
T PRK05479 17 GKKVAIIG-YGSQGHAHALNLRDSGV-----DVVV--G--LREGSKSWKKAEA--D---G----FEV-LTVAEAAKWADV 76 (330)
T ss_pred CCEEEEEe-eHHHHHHHHHHHHHCCC-----EEEE--E--ECCchhhHHHHHH--C---C----Cee-CCHHHHHhcCCE
Confidence 46899999 59999999999998875 2433 2 2222222222221 1 1 112 256789999999
Q ss_pred EEEeC
Q 015897 176 ALLIG 180 (398)
Q Consensus 176 Viita 180 (398)
|+++.
T Consensus 77 VvLaV 81 (330)
T PRK05479 77 IMILL 81 (330)
T ss_pred EEEcC
Confidence 99985
No 326
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=94.64 E-value=0.59 Score=43.58 Aligned_cols=26 Identities=19% Similarity=0.118 Sum_probs=23.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.++|.|+||+|.+|.+++..|+..|.
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~ 30 (248)
T TIGR01832 5 GKVALVTGANTGLGQGIAVGLAEAGA 30 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC
Confidence 46899999999999999999999875
No 327
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=94.64 E-value=0.53 Score=43.89 Aligned_cols=116 Identities=16% Similarity=0.147 Sum_probs=61.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ecC--ccc----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GIN--PYE---- 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~~--~~e---- 168 (398)
.+++.|+||+|.+|.+++..|+..+. .+.+ . ..++++.++....++.+.. .++.. ..| +.+
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~-----~v~~--~-~~~~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~~~~~~ 73 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGA-----KVVI--N-YNSSKEAAENLVNELGKEG----HDVYAVQADVSKVEDANR 73 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-----EEEE--E-cCCcHHHHHHHHHHHHhcC----CeEEEEECCCCCHHHHHH
Confidence 36899999999999999999998774 2433 1 1344455555555554321 11111 111 111
Q ss_pred -------ccCCCcEEEEeCCCCCCCCC---c---hhhhHHHHHHHHHHHHHHHHHhc--CCCeEEEEECC
Q 015897 169 -------LFEDAEWALLIGAKPRGPGM---E---RAGLLDINGQIFAEQGKALNAVA--SRNVKVIVVGN 223 (398)
Q Consensus 169 -------al~dADiViitag~~rk~g~---~---r~dll~~N~~i~~~i~~~i~~~a--~p~a~vIvvtN 223 (398)
.+...|+||.++|....... + -.+.+..|..-...+.+.+..+. ..++.+++++.
T Consensus 74 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 143 (247)
T PRK12935 74 LVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS 143 (247)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 12457999998876432111 1 12335555444333333333210 23556666664
No 328
>PRK07201 short chain dehydrogenase; Provisional
Probab=94.64 E-value=0.39 Score=51.91 Aligned_cols=103 Identities=16% Similarity=0.117 Sum_probs=57.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec------------
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI------------ 164 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~------------ 164 (398)
|||.|+||+|++|++++..|+.... + ..|.. ++.+...+.++.....+.+ .+++...
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~-g--~~V~~--l~R~~~~~~~~~~~~~~~~------~~v~~~~~Dl~~~~~~~~~ 69 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRR-E--ATVHV--LVRRQSLSRLEALAAYWGA------DRVVPLVGDLTEPGLGLSE 69 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCC-C--CEEEE--EECcchHHHHHHHHHhcCC------CcEEEEecccCCccCCcCH
Confidence 4899999999999999999985221 1 12432 2222122222222111100 0111111
Q ss_pred CcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHh
Q 015897 165 NPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAV 211 (398)
Q Consensus 165 ~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~ 211 (398)
...+.++++|+||.+++... ......+....|+.-...+.+.+.+.
T Consensus 70 ~~~~~l~~~D~Vih~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~ 115 (657)
T PRK07201 70 ADIAELGDIDHVVHLAAIYD-LTADEEAQRAANVDGTRNVVELAERL 115 (657)
T ss_pred HHHHHhcCCCEEEECceeec-CCCCHHHHHHHHhHHHHHHHHHHHhc
Confidence 11233489999999987532 12233456677888888888877774
No 329
>PRK09134 short chain dehydrogenase; Provisional
Probab=94.60 E-value=0.49 Score=44.65 Aligned_cols=27 Identities=30% Similarity=0.265 Sum_probs=23.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
..+++.|+||+|.+|.+++..|+..+.
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~ 34 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF 34 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC
Confidence 346899999999999999999998774
No 330
>PRK06057 short chain dehydrogenase; Provisional
Probab=94.60 E-value=0.15 Score=48.04 Aligned_cols=45 Identities=18% Similarity=0.121 Sum_probs=32.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHH
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMEL 149 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL 149 (398)
.++|.|+||+|.+|.+++..|+..|. .+.+ ++++.+.++....++
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~ 51 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAAEGA-----TVVV----GDIDPEAGKAAADEV 51 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC-----EEEE----EeCCHHHHHHHHHHc
Confidence 46899999999999999999998874 2443 356655555444443
No 331
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=94.60 E-value=0.29 Score=48.32 Aligned_cols=116 Identities=17% Similarity=0.189 Sum_probs=73.9
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcc---eEEEecCc------ccc
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR---EVKIGINP------YEL 169 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~---~v~i~~~~------~ea 169 (398)
.+|.||+..||.++|..|+.+|+ .+.| +-+++++|+..+.||++.. ..-. .+.++.++ .+.
T Consensus 52 AVVTGaTDGIGKayA~eLAkrG~-----nvvL----IsRt~~KL~~v~kEI~~~~-~vev~~i~~Dft~~~~~ye~i~~~ 121 (312)
T KOG1014|consen 52 AVVTGATDGIGKAYARELAKRGF-----NVVL----ISRTQEKLEAVAKEIEEKY-KVEVRIIAIDFTKGDEVYEKLLEK 121 (312)
T ss_pred EEEECCCCcchHHHHHHHHHcCC-----EEEE----EeCCHHHHHHHHHHHHHHh-CcEEEEEEEecCCCchhHHHHHHH
Confidence 46889999999999999999997 3544 6899999999999999865 3211 22233333 356
Q ss_pred cCCCcEEEE--eCCCCC-CCC-------CchhhhHHHH----HHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 170 FEDAEWALL--IGAKPR-GPG-------MERAGLLDIN----GQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 170 l~dADiVii--tag~~r-k~g-------~~r~dll~~N----~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
+.+-|+=|+ .+|... -|. .+-.+.+..| ...-+.+...|.+ +..|.|++++--..
T Consensus 122 l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~--r~~G~IvnigS~ag 190 (312)
T KOG1014|consen 122 LAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVE--RKKGIIVNIGSFAG 190 (312)
T ss_pred hcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhc--CCCceEEEeccccc
Confidence 667777544 455432 222 1111112222 2345566667776 57899999885443
No 332
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.59 E-value=0.15 Score=49.63 Aligned_cols=74 Identities=18% Similarity=0.173 Sum_probs=51.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
..++.|+|| |.+|.+++..|...+.. .|.+ .+++.++++..+.++.... .+.+..+..+.+.++|+
T Consensus 123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~~----~V~v----~~R~~~~a~~l~~~~~~~~-----~~~~~~~~~~~~~~~Di 188 (278)
T PRK00258 123 GKRILILGA-GGAARAVILPLLDLGVA----EITI----VNRTVERAEELAKLFGALG-----KAELDLELQEELADFDL 188 (278)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCC----EEEE----EeCCHHHHHHHHHHhhhcc-----ceeecccchhccccCCE
Confidence 468999995 99999999999987752 2544 3788888877776654221 12221234577889999
Q ss_pred EEEeCCCC
Q 015897 176 ALLIGAKP 183 (398)
Q Consensus 176 Viitag~~ 183 (398)
||.+-...
T Consensus 189 vInaTp~g 196 (278)
T PRK00258 189 IINATSAG 196 (278)
T ss_pred EEECCcCC
Confidence 99975443
No 333
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=94.54 E-value=0.13 Score=53.13 Aligned_cols=106 Identities=22% Similarity=0.250 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
+..+|+|+|| |.+|..++..|...|.. .|.+ .+++.++++..+.++.. .+....+..+.+.++|
T Consensus 181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~----~V~v----~~r~~~ra~~la~~~g~-------~~~~~~~~~~~l~~aD 244 (423)
T PRK00045 181 SGKKVLVIGA-GEMGELVAKHLAEKGVR----KITV----ANRTLERAEELAEEFGG-------EAIPLDELPEALAEAD 244 (423)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHCCCC----eEEE----EeCCHHHHHHHHHHcCC-------cEeeHHHHHHHhccCC
Confidence 3479999995 99999999998876641 2443 36777777666655421 1111134567788999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhH
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTN 228 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~ 228 (398)
+||.+.+.+. +-.+. ..+.. .+...-....++|-+++|-|+=
T Consensus 245 vVI~aT~s~~-~~i~~--------~~l~~---~~~~~~~~~~vviDla~Prdid 286 (423)
T PRK00045 245 IVISSTGAPH-PIIGK--------GMVER---ALKARRHRPLLLVDLAVPRDIE 286 (423)
T ss_pred EEEECCCCCC-cEEcH--------HHHHH---HHhhccCCCeEEEEeCCCCCCc
Confidence 9999866442 10111 11111 1111102468899999997753
No 334
>PRK05865 hypothetical protein; Provisional
Probab=94.50 E-value=0.097 Score=58.68 Aligned_cols=113 Identities=16% Similarity=0.075 Sum_probs=65.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe--cCcccccCCCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG--INPYELFEDAE 174 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~--~~~~eal~dAD 174 (398)
|||.|+||+|++|++++..|+..|. .|.. ++++.... +.... .+ ....+. ....++++++|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~-----~Vv~----l~R~~~~~------~~~~v-~~-v~gDL~D~~~l~~al~~vD 63 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH-----EVVG----IARHRPDS------WPSSA-DF-IAADIRDATAVESAMTGAD 63 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC-----EEEE----EECCchhh------cccCc-eE-EEeeCCCHHHHHHHHhCCC
Confidence 4899999999999999999998774 2433 24432110 00000 00 011111 12245678899
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHH
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKN 235 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~ 235 (398)
+||.+++... + ....|..-...+.+.+.+. + -..+|++|.+.-..++.+.+.
T Consensus 64 ~VVHlAa~~~-~------~~~vNv~GT~nLLeAa~~~-g-vkr~V~iSS~~K~aaE~ll~~ 115 (854)
T PRK05865 64 VVAHCAWVRG-R------NDHINIDGTANVLKAMAET-G-TGRIVFTSSGHQPRVEQMLAD 115 (854)
T ss_pred EEEECCCccc-c------hHHHHHHHHHHHHHHHHHc-C-CCeEEEECCcHHHHHHHHHHH
Confidence 9999986432 1 3456777777777777764 2 346777777653334433333
No 335
>PRK08589 short chain dehydrogenase; Validated
Probab=94.49 E-value=0.56 Score=44.86 Aligned_cols=116 Identities=10% Similarity=0.017 Sum_probs=64.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEecC---------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGIN--------- 165 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~~--------- 165 (398)
.+++.|+||+|.+|.+++..|+..|. .+.+ .+++ +.++..+.++.+...... ....++..
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~-----~vi~----~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 75 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGA-----YVLA----VDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASE 75 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-----EEEE----EeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHH
Confidence 45899999999999999999998874 2443 2566 556656666653210000 01111110
Q ss_pred cccccCCCcEEEEeCCCCCCCC----Cchh---hhHHHHH----HHHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 166 PYELFEDAEWALLIGAKPRGPG----MERA---GLLDING----QIFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 166 ~~eal~dADiViitag~~rk~g----~~r~---dll~~N~----~i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
-.+.+...|++|..+|.....+ .+.. ..+..|. .+.+.+.+.+.+ .++.||+++-.
T Consensus 76 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~g~iv~isS~ 142 (272)
T PRK08589 76 IKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMME---QGGSIINTSSF 142 (272)
T ss_pred HHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCEEEEeCch
Confidence 1112345799999888643211 1111 2233443 344555566654 24777777743
No 336
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=94.46 E-value=0.1 Score=50.72 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=44.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
+++||+||| .|.+|..++..|... ..+ -++.. ++ |++.++++..+..+.. ....++..+.+.++|
T Consensus 5 ~~irIGIIG-~G~IG~~~a~~L~~~-~~~--~el~a-V~--dr~~~~a~~~a~~~g~--------~~~~~~~eell~~~D 69 (271)
T PRK13302 5 PELRVAIAG-LGAIGKAIAQALDRG-LPG--LTLSA-VA--VRDPQRHADFIWGLRR--------PPPVVPLDQLATHAD 69 (271)
T ss_pred CeeEEEEEC-ccHHHHHHHHHHHhc-CCC--eEEEE-EE--CCCHHHHHHHHHhcCC--------CcccCCHHHHhcCCC
Confidence 358999999 599999999888764 111 02321 23 6666665544433210 112344556678899
Q ss_pred EEEEeCC
Q 015897 175 WALLIGA 181 (398)
Q Consensus 175 iViitag 181 (398)
+|+++..
T Consensus 70 ~Vvi~tp 76 (271)
T PRK13302 70 IVVEAAP 76 (271)
T ss_pred EEEECCC
Confidence 9999865
No 337
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.44 E-value=0.74 Score=43.23 Aligned_cols=44 Identities=27% Similarity=0.230 Sum_probs=32.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHH
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMEL 149 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL 149 (398)
+++.|+||+|.+|..++..|+..|. .+.+ .+++.+.++....++
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~-----~v~~----~~r~~~~~~~~~~~~ 46 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGD-----RVLA----LDIDAAALAAFADAL 46 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHh
Confidence 4799999999999999999998764 2443 356666665555554
No 338
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.41 E-value=0.46 Score=45.32 Aligned_cols=45 Identities=16% Similarity=0.083 Sum_probs=31.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
+++.|+||+|.+|.+++..|+..|. .|.+ .+++.+.++....++.
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~ 48 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKGY-----LVIA----TMRNPEKQENLLSQAT 48 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCC-----EEEE----EeCCHHHHHHHHHHHH
Confidence 4689999999999999999998774 2433 2555555554444433
No 339
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=94.39 E-value=0.19 Score=50.64 Aligned_cols=25 Identities=28% Similarity=0.460 Sum_probs=22.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGE 120 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~ 120 (398)
|+||+|+||+|.+|..++..|....
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p 26 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHP 26 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCC
Confidence 5799999999999999999888654
No 340
>PLN02712 arogenate dehydrogenase
Probab=94.38 E-value=0.45 Score=52.20 Aligned_cols=102 Identities=20% Similarity=0.099 Sum_probs=56.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccC-CC
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFE-DA 173 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~-dA 173 (398)
+++||+||| .|.+|..++..|...|. .|.. + |++.+. + .+.++ + +....+..+.+. ++
T Consensus 368 ~~~kIgIIG-lG~mG~slA~~L~~~G~-----~V~~--~--dr~~~~-~-~a~~~-----G----v~~~~~~~el~~~~a 426 (667)
T PLN02712 368 SKLKIAIVG-FGNFGQFLAKTMVKQGH-----TVLA--Y--SRSDYS-D-EAQKL-----G----VSYFSDADDLCEEHP 426 (667)
T ss_pred CCCEEEEEe-cCHHHHHHHHHHHHCcC-----EEEE--E--ECChHH-H-HHHHc-----C----CeEeCCHHHHHhcCC
Confidence 457999999 59999999999987663 2432 3 454321 1 22221 1 112333444454 59
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHH-hcCCCeEEEEECCCchhHHHHHH
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNA-VASRNVKVIVVGNPCNTNALICL 233 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~-~a~p~a~vIvvtNP~d~~t~~~~ 233 (398)
|+||++.-. ..+.++.+.+.. ...++++|+-++.-=......+.
T Consensus 427 DvVILavP~----------------~~~~~vi~~l~~~~lk~g~ivvDv~SvK~~~~~~~~ 471 (667)
T PLN02712 427 EVILLCTSI----------------LSTEKVLKSLPFQRLKRSTLFVDVLSVKEFPRNLFL 471 (667)
T ss_pred CEEEECCCh----------------HHHHHHHHHHHHhcCCCCcEEEECCCccHHHHHHHH
Confidence 999998531 223333333332 12467888877654333333333
No 341
>PRK06179 short chain dehydrogenase; Provisional
Probab=94.38 E-value=0.11 Score=49.33 Aligned_cols=26 Identities=27% Similarity=0.128 Sum_probs=23.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
..+|.|+||+|.+|.+++..|+..|.
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~ 29 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY 29 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC
Confidence 45899999999999999999998874
No 342
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.37 E-value=0.59 Score=43.55 Aligned_cols=26 Identities=19% Similarity=0.216 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
..+|.|+||+|.||++++..|+..+.
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~ 31 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS 31 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC
Confidence 46899999999999999999998775
No 343
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.34 E-value=0.65 Score=43.97 Aligned_cols=48 Identities=21% Similarity=0.362 Sum_probs=34.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELED 151 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d 151 (398)
.++|.|+||++.||.+++..|+..|. .+.+ . .+.+++.++..+.++..
T Consensus 8 ~k~vlItGas~gIG~~ia~~l~~~G~-----~v~~--~-~~~~~~~~~~~~~~~~~ 55 (260)
T PRK08416 8 GKTLVISGGTRGIGKAIVYEFAQSGV-----NIAF--T-YNSNVEEANKIAEDLEQ 55 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-----EEEE--E-cCCCHHHHHHHHHHHHH
Confidence 35899999999999999999998875 2443 2 13456666666666653
No 344
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=94.34 E-value=0.16 Score=51.23 Aligned_cols=26 Identities=23% Similarity=0.410 Sum_probs=22.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
++||+|+||+|.+|..++..|...+.
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~ 28 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPW 28 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCC
Confidence 47999999999999999998886543
No 345
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.32 E-value=0.14 Score=50.72 Aligned_cols=74 Identities=12% Similarity=0.055 Sum_probs=52.2
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHh-cCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCC
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAA-GEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFED 172 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~-~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~d 172 (398)
.+..+|+||| +|..|...+..++. .++ . .|.+ + +++.++++..+.++.+.. . .+. ..+.++++.+
T Consensus 123 ~~~~~v~IiG-aG~qa~~~~~al~~~~~~-~---~v~v--~--~r~~~~a~~~a~~~~~~~--~--~~~-~~~~~~av~~ 188 (304)
T PRK07340 123 APPGDLLLIG-TGVQARAHLEAFAAGLPV-R---RVWV--R--GRTAASAAAFCAHARALG--P--TAE-PLDGEAIPEA 188 (304)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHhCCC-C---EEEE--E--cCCHHHHHHHHHHHHhcC--C--eeE-ECCHHHHhhc
Confidence 3457999999 59999999998875 343 2 2544 3 778888888888876321 1 232 3556778999
Q ss_pred CcEEEEeCC
Q 015897 173 AEWALLIGA 181 (398)
Q Consensus 173 ADiViitag 181 (398)
||+|+.+-.
T Consensus 189 aDiVitaT~ 197 (304)
T PRK07340 189 VDLVVTATT 197 (304)
T ss_pred CCEEEEccC
Confidence 999998643
No 346
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.32 E-value=0.2 Score=47.24 Aligned_cols=78 Identities=23% Similarity=0.179 Sum_probs=47.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccc-----------------cchhhHHHHHHHHhhhcCCCcc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSE-----------------RSLQALEGVAMELEDSLFPLLR 158 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D-----------------~~~~~l~g~a~DL~d~~~~~~~ 158 (398)
..||.|+|+ |.+|+.++..|+..|+-. +. |+|-| +...+++..+..|+... |..
T Consensus 21 ~~~VlivG~-GglGs~va~~La~~Gvg~----i~--lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~~- 91 (228)
T cd00757 21 NARVLVVGA-GGLGSPAAEYLAAAGVGK----LG--LVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAIN-PDV- 91 (228)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCE----EE--EEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhC-CCC-
Confidence 359999995 999999999999998721 33 34433 22344555555555443 321
Q ss_pred eEEEec------CcccccCCCcEEEEeCCC
Q 015897 159 EVKIGI------NPYELFEDAEWALLIGAK 182 (398)
Q Consensus 159 ~v~i~~------~~~eal~dADiViitag~ 182 (398)
++.... +..+.++++|+||.+...
T Consensus 92 ~i~~~~~~i~~~~~~~~~~~~DvVi~~~d~ 121 (228)
T cd00757 92 EIEAYNERLDAENAEELIAGYDLVLDCTDN 121 (228)
T ss_pred EEEEecceeCHHHHHHHHhCCCEEEEcCCC
Confidence 222111 123467899999988653
No 347
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=94.31 E-value=0.12 Score=51.44 Aligned_cols=73 Identities=26% Similarity=0.199 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
+..+++||| +|..+..-+..++.-.-+. .|.+ + +++.++++..+.++++ . ...+....+.++++++||
T Consensus 127 ~~~~l~viG-aG~QA~~~~~a~~~~~~i~---~v~v--~--~r~~~~~~~~~~~~~~-~---~~~v~~~~~~~~av~~aD 194 (313)
T PF02423_consen 127 DARTLGVIG-AGVQARWHLRALAAVRPIK---EVRV--Y--SRSPERAEAFAARLRD-L---GVPVVAVDSAEEAVRGAD 194 (313)
T ss_dssp T--EEEEE---SHHHHHHHHHHHHHS--S---EEEE--E---SSHHHHHHHHHHHHC-C---CTCEEEESSHHHHHTTSS
T ss_pred CCceEEEEC-CCHHHHHHHHHHHHhCCce---EEEE--E--ccChhHHHHHHHhhcc-c---cccceeccchhhhcccCC
Confidence 457999999 5999998777665432233 3554 3 7888999999999887 2 235666778899999999
Q ss_pred EEEEe
Q 015897 175 WALLI 179 (398)
Q Consensus 175 iViit 179 (398)
+|+.+
T Consensus 195 ii~ta 199 (313)
T PF02423_consen 195 IIVTA 199 (313)
T ss_dssp EEEE-
T ss_pred EEEEc
Confidence 98875
No 348
>PLN00203 glutamyl-tRNA reductase
Probab=94.27 E-value=0.15 Score=54.11 Aligned_cols=106 Identities=17% Similarity=0.159 Sum_probs=64.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
..||+|||| |.+|..++..|...|. . .|.+ .+++.++++..+..+.... ..+....+..+++.++|+
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~-~---~V~V----~nRs~era~~La~~~~g~~----i~~~~~~dl~~al~~aDV 332 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGC-T---KMVV----VNRSEERVAALREEFPDVE----IIYKPLDEMLACAAEADV 332 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCC-C---eEEE----EeCCHHHHHHHHHHhCCCc----eEeecHhhHHHHHhcCCE
Confidence 479999995 9999999999988774 1 2544 3777787776665542110 011122345678899999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhc---CCCeEEEEECCCchh
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVA---SRNVKVIVVGNPCNT 227 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a---~p~a~vIvvtNP~d~ 227 (398)
||.+-+.+. | -+.++..+.+.+.. ...-.+|-++.|-|+
T Consensus 333 VIsAT~s~~-p------------vI~~e~l~~~~~~~~~~~~~~~~IDLAvPRdI 374 (519)
T PLN00203 333 VFTSTSSET-P------------LFLKEHVEALPPASDTVGGKRLFVDISVPRNV 374 (519)
T ss_pred EEEccCCCC-C------------eeCHHHHHHhhhcccccCCCeEEEEeCCCCCC
Confidence 988644331 1 12333334333210 112478899999765
No 349
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=94.26 E-value=0.23 Score=44.35 Aligned_cols=77 Identities=17% Similarity=0.052 Sum_probs=45.7
Q ss_pred CCEEEEEcC-CCchHHHHHHHHHhcCcCCCCCceEEEecccccc--hh--hHHHHHHHHhhhcCCCcceEEEecCccccc
Q 015897 96 MVNIAVSGA-AGMIANHLLFKLAAGEVLGPDQPIALKLLGSERS--LQ--ALEGVAMELEDSLFPLLREVKIGINPYELF 170 (398)
Q Consensus 96 ~~KI~IiGA-~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~--~~--~l~g~a~DL~d~~~~~~~~v~i~~~~~eal 170 (398)
..||+++|= -+++..+++..+..-|. .+ ++.....- +. ..-..+.+.... ....++++.+..+++
T Consensus 2 gl~i~~vGD~~~rv~~Sl~~~~~~~g~-----~~--~~~~P~~~~~~~~~~~~~~~~~~~~~---~g~~i~~~~~~~e~l 71 (158)
T PF00185_consen 2 GLKIAYVGDGHNRVAHSLIELLAKFGM-----EV--VLIAPEGLRYPPDPEVLEKAKKNAKK---NGGKITITDDIEEAL 71 (158)
T ss_dssp TEEEEEESSTTSHHHHHHHHHHHHTTS-----EE--EEESSGGGGGSHHHHHHHHHHHHHHH---HTTEEEEESSHHHHH
T ss_pred CCEEEEECCCCChHHHHHHHHHHHcCC-----EE--EEECCCcccCCCCHHHHHHHHHHHHH---hCCCeEEEeCHHHhc
Confidence 469999994 36899999988888664 23 33322210 01 111122221111 124678888888999
Q ss_pred CCCcEEEEeCCC
Q 015897 171 EDAEWALLIGAK 182 (398)
Q Consensus 171 ~dADiViitag~ 182 (398)
++||+|+...-.
T Consensus 72 ~~aDvvy~~~~~ 83 (158)
T PF00185_consen 72 KGADVVYTDRWQ 83 (158)
T ss_dssp TT-SEEEEESSS
T ss_pred CCCCEEEEcCcc
Confidence 999999887544
No 350
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.25 E-value=0.55 Score=40.66 Aligned_cols=23 Identities=22% Similarity=0.426 Sum_probs=21.4
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCc
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
||.|+|+ |.+|+.++..|+..|+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv 23 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV 23 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC
Confidence 6899995 9999999999999987
No 351
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.24 E-value=0.65 Score=44.43 Aligned_cols=26 Identities=27% Similarity=0.215 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
++.+.|+||+|.+|.+++..|+..|.
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~ 35 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF 35 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC
Confidence 35899999999999999999998875
No 352
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=94.21 E-value=0.045 Score=53.47 Aligned_cols=134 Identities=14% Similarity=0.099 Sum_probs=80.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhc----CcCCCCCceEEEecccc--cchhh--HHHHHHHHhhhcCCCcceEEEecCccc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAG----EVLGPDQPIALKLLGSE--RSLQA--LEGVAMELEDSLFPLLREVKIGINPYE 168 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~----~~~~~~~~i~L~L~d~D--~~~~~--l~g~a~DL~d~~~~~~~~v~i~~~~~e 168 (398)
.||.|.|| |..|..++..|... |+-.++-.-.+.++|.+ +.+++ +......+.+.. . + ....+..|
T Consensus 26 ~~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~-~---~-~~~~~L~e 99 (279)
T cd05312 26 QRILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD-E---E-KEGKSLLE 99 (279)
T ss_pred cEEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc-C---c-ccCCCHHH
Confidence 69999995 99999999888775 65221101123344432 00111 222222232211 0 0 12346889
Q ss_pred ccC--CCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch---hHHHHHHHHCCCCCCce
Q 015897 169 LFE--DAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN---TNALICLKNAPSIPAKN 243 (398)
Q Consensus 169 al~--dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d---~~t~~~~k~~~~~~~kv 243 (398)
+++ ++|++|=+.+.+ | -+-+++.+.|.++ +++.+|.-.+||.. ....-+++.+.+ +.+
T Consensus 100 ~i~~v~ptvlIG~S~~~---g-----------~ft~evv~~Ma~~-~~~PIIFaLSNPt~~~E~~pe~a~~~t~G--~ai 162 (279)
T cd05312 100 VVKAVKPTVLIGLSGVG---G-----------AFTEEVVRAMAKS-NERPIIFALSNPTSKAECTAEDAYKWTDG--RAL 162 (279)
T ss_pred HHHhcCCCEEEEeCCCC---C-----------CCCHHHHHHHHhc-CCCCEEEECCCcCCccccCHHHHHHhhcC--CEE
Confidence 999 999988765433 1 2345677788887 68999999999964 455666666533 247
Q ss_pred EEecCchhHH
Q 015897 244 FHALTRLDEN 253 (398)
Q Consensus 244 ig~gt~lDs~ 253 (398)
|++|+-.+..
T Consensus 163 ~ATGsPf~pv 172 (279)
T cd05312 163 FASGSPFPPV 172 (279)
T ss_pred EEeCCCCCCe
Confidence 8888755543
No 353
>PRK07060 short chain dehydrogenase; Provisional
Probab=94.20 E-value=0.29 Score=45.49 Aligned_cols=115 Identities=15% Similarity=0.097 Sum_probs=59.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--Cccc---cc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--NPYE---LF 170 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~~~e---al 170 (398)
.+++.|+||+|.+|.+++..|+..|. .|.+ .+++.+.++.....+. .. .....++. ...+ ..
T Consensus 9 ~~~~lItGa~g~iG~~~a~~l~~~g~-----~V~~----~~r~~~~~~~~~~~~~-~~---~~~~D~~~~~~v~~~~~~~ 75 (245)
T PRK07060 9 GKSVLVTGASSGIGRACAVALAQRGA-----RVVA----AARNAAALDRLAGETG-CE---PLRLDVGDDAAIRAALAAA 75 (245)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHhC-Ce---EEEecCCCHHHHHHHHHHh
Confidence 46899999999999999999998874 2443 3566555543332221 00 00111110 0011 12
Q ss_pred CCCcEEEEeCCCCCC-C--CCchh---hhHHHHHHHHHHHHHHHHHhc---CCCeEEEEECC
Q 015897 171 EDAEWALLIGAKPRG-P--GMERA---GLLDINGQIFAEQGKALNAVA---SRNVKVIVVGN 223 (398)
Q Consensus 171 ~dADiViitag~~rk-~--g~~r~---dll~~N~~i~~~i~~~i~~~a---~p~a~vIvvtN 223 (398)
...|+||..+|.... + ..+.. ..+..|..-...+.+.+.+.. +..+.+|+++-
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS 137 (245)
T PRK07060 76 GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSS 137 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEcc
Confidence 357999998876431 1 11221 234455444334444333321 22367777763
No 354
>PRK06199 ornithine cyclodeaminase; Validated
Probab=94.18 E-value=0.17 Score=51.69 Aligned_cols=77 Identities=16% Similarity=0.243 Sum_probs=55.2
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhc-CcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCC
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAG-EVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFED 172 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~-~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~d 172 (398)
.....++||| +|..+..-+..++.- .-+. +|.+ + +++.++++..+.++.+.. +...++.+..+..+++++
T Consensus 153 ~da~~l~iiG-~G~QA~~~l~a~~~v~~~i~---~V~v--~--~r~~~~a~~f~~~~~~~~-~~~~~v~~~~s~~eav~~ 223 (379)
T PRK06199 153 KDSKVVGLLG-PGVMGKTILAAFMAVCPGID---TIKI--K--GRGQKSLDSFATWVAETY-PQITNVEVVDSIEEVVRG 223 (379)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHhcCCcc---EEEE--E--CCCHHHHHHHHHHHHHhc-CCCceEEEeCCHHHHHcC
Confidence 3457999999 599999988877763 2123 3544 3 788899998998887532 211246677788999999
Q ss_pred CcEEEEe
Q 015897 173 AEWALLI 179 (398)
Q Consensus 173 ADiViit 179 (398)
||+|+.+
T Consensus 224 ADIVvta 230 (379)
T PRK06199 224 SDIVTYC 230 (379)
T ss_pred CCEEEEc
Confidence 9999864
No 355
>PRK06823 ornithine cyclodeaminase; Validated
Probab=94.17 E-value=0.2 Score=49.86 Aligned_cols=75 Identities=19% Similarity=0.128 Sum_probs=53.8
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCC
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDA 173 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dA 173 (398)
....+++||| +|..+..-+..++.-.-+. +|.+ + +++.++++..+..+++.. .++.+..+..+++++|
T Consensus 126 ~d~~~l~iiG-~G~qA~~~~~a~~~v~~i~---~v~v--~--~r~~~~a~~~~~~~~~~~----~~v~~~~~~~~av~~A 193 (315)
T PRK06823 126 QHVSAIGIVG-TGIQARMQLMYLKNVTDCR---QLWV--W--GRSETALEEYRQYAQALG----FAVNTTLDAAEVAHAA 193 (315)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHhcCCCC---EEEE--E--CCCHHHHHHHHHHHHhcC----CcEEEECCHHHHhcCC
Confidence 3467999999 5999999888777643322 3544 3 788899888886665421 2466666788999999
Q ss_pred cEEEEeC
Q 015897 174 EWALLIG 180 (398)
Q Consensus 174 DiViita 180 (398)
|+|+.+-
T Consensus 194 DIV~taT 200 (315)
T PRK06823 194 NLIVTTT 200 (315)
T ss_pred CEEEEec
Confidence 9998753
No 356
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.14 E-value=0.5 Score=44.53 Aligned_cols=117 Identities=15% Similarity=0.119 Sum_probs=60.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccch-hhHHHHHHHHhhhcCCCc-ceEEEec--Cc-----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSL-QALEGVAMELEDSLFPLL-REVKIGI--NP----- 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~-~~l~g~a~DL~d~~~~~~-~~v~i~~--~~----- 166 (398)
.+++.|+||+|.+|.+++..|+..|. .+.+ . +++. +.++....++.+...... ....++. +.
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G~-----~v~~--~--~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~ 78 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAGA-----DVAL--F--DLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVA 78 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-----EEEE--E--eCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 45899999999999999999999874 2433 2 4432 334444555543210000 0111110 00
Q ss_pred --ccccCCCcEEEEeCCCCCCCCC---chh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 --YELFEDAEWALLIGAKPRGPGM---ERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 --~eal~dADiViitag~~rk~g~---~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+..-|++|.++|....... +.. ..+..|+. +.+.+.+.+.+. ..+.+|+++-
T Consensus 79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~isS 145 (254)
T PRK06114 79 RTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN--GGGSIVNIAS 145 (254)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc--CCcEEEEECc
Confidence 1223346999999886432111 111 22444433 334555555542 4566666653
No 357
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.14 E-value=0.75 Score=44.06 Aligned_cols=26 Identities=15% Similarity=0.169 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.+++.|+||+|.+|.+++..|+..|.
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~ 31 (273)
T PRK08278 6 GKTLFITGASRGIGLAIALRAARDGA 31 (273)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC
Confidence 45899999999999999999998874
No 358
>PRK05599 hypothetical protein; Provisional
Probab=94.13 E-value=0.57 Score=44.14 Aligned_cols=118 Identities=14% Similarity=0.150 Sum_probs=65.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc--ceEEEec---------C
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL--REVKIGI---------N 165 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~--~~v~i~~---------~ 165 (398)
|.+.|+||++.+|..++..|+. +. .+.+ .++++++++..+.++........ ..+.++. .
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g~-----~Vil----~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 70 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-GE-----DVVL----AARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQ 70 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-CC-----EEEE----EeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHH
Confidence 3588999999999999999984 42 2444 36777888877777764321100 0111111 0
Q ss_pred cccccCCCcEEEEeCCCCCCCC---Cch---hhhHHHH----HHHHHHHHHHHHHhcCCCeEEEEECCCc
Q 015897 166 PYELFEDAEWALLIGAKPRGPG---MER---AGLLDIN----GQIFAEQGKALNAVASRNVKVIVVGNPC 225 (398)
Q Consensus 166 ~~eal~dADiViitag~~rk~g---~~r---~dll~~N----~~i~~~i~~~i~~~a~p~a~vIvvtNP~ 225 (398)
-.+.+..-|++|..+|...... .+. .+....| ..+.+.+.+.+.+. ..++.||+++.-.
T Consensus 71 ~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~~g~Iv~isS~~ 139 (246)
T PRK05599 71 TQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQ-TAPAAIVAFSSIA 139 (246)
T ss_pred HHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhc-CCCCEEEEEeccc
Confidence 1233456899999888642111 111 1222333 22334555666553 2357788777543
No 359
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.12 E-value=0.2 Score=46.94 Aligned_cols=77 Identities=19% Similarity=0.309 Sum_probs=47.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEeccccc----------------chhhHHHHHHHHhhhcCCCcce
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSER----------------SLQALEGVAMELEDSLFPLLRE 159 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~----------------~~~~l~g~a~DL~d~~~~~~~~ 159 (398)
..||+|+|+ |.+|+.++..|+..|+-. +. |+|.|. ...+++..+..|+... +.. +
T Consensus 28 ~~~V~ViG~-GglGs~ia~~La~~Gvg~----i~--lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~ln-p~v-~ 98 (212)
T PRK08644 28 KAKVGIAGA-GGLGSNIAVALARSGVGN----LK--LVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEIN-PFV-E 98 (212)
T ss_pred CCCEEEECc-CHHHHHHHHHHHHcCCCe----EE--EEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHC-CCC-E
Confidence 459999995 999999999999998721 33 355542 1234555555555433 221 2
Q ss_pred EEEe-----cC-cccccCCCcEEEEeCC
Q 015897 160 VKIG-----IN-PYELFEDAEWALLIGA 181 (398)
Q Consensus 160 v~i~-----~~-~~eal~dADiViitag 181 (398)
+... .. ..+.++++|+||.+..
T Consensus 99 v~~~~~~i~~~~~~~~~~~~DvVI~a~D 126 (212)
T PRK08644 99 IEAHNEKIDEDNIEELFKDCDIVVEAFD 126 (212)
T ss_pred EEEEeeecCHHHHHHHHcCCCEEEECCC
Confidence 2211 11 2256789999998743
No 360
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=94.12 E-value=0.18 Score=50.64 Aligned_cols=76 Identities=12% Similarity=0.126 Sum_probs=47.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccc-------------------hhhHHHHHHHHhhhcCCCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERS-------------------LQALEGVAMELEDSLFPLL 157 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~-------------------~~~l~g~a~DL~d~~~~~~ 157 (398)
.||.|||+ |.+|++++..|+..|+ + .+. |+|.|.- ..+++..+..|.+.. +..
T Consensus 25 ~~VlIiG~-GglGs~va~~La~aGv-g---~i~--lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~in-p~v 96 (338)
T PRK12475 25 KHVLIVGA-GALGAANAEALVRAGI-G---KLT--IADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKIN-SEV 96 (338)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCC-C---EEE--EEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHC-CCc
Confidence 58999995 9999999999999987 2 143 4555531 124444455555443 221
Q ss_pred ceEEEec------CcccccCCCcEEEEeCC
Q 015897 158 REVKIGI------NPYELFEDAEWALLIGA 181 (398)
Q Consensus 158 ~~v~i~~------~~~eal~dADiViitag 181 (398)
++.... +..+.++++|+||.+..
T Consensus 97 -~i~~~~~~~~~~~~~~~~~~~DlVid~~D 125 (338)
T PRK12475 97 -EIVPVVTDVTVEELEELVKEVDLIIDATD 125 (338)
T ss_pred -EEEEEeccCCHHHHHHHhcCCCEEEEcCC
Confidence 222111 12456889999998753
No 361
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=94.12 E-value=0.54 Score=43.63 Aligned_cols=77 Identities=18% Similarity=0.156 Sum_probs=48.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEeccccc-----------------chhhHHHHHHHHhhhcCCCcc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSER-----------------SLQALEGVAMELEDSLFPLLR 158 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~-----------------~~~~l~g~a~DL~d~~~~~~~ 158 (398)
..||.|+|+ |.+|+.++..|+..|+-. +. |+|.|. ...+++..+..|.+.. |..
T Consensus 21 ~~~VlviG~-GglGs~ia~~La~~Gv~~----i~--lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~v- 91 (202)
T TIGR02356 21 NSHVLIIGA-GGLGSPAALYLAGAGVGT----IV--IVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELN-SDI- 91 (202)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCCe----EE--EecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhC-CCC-
Confidence 359999995 999999999999998721 43 455542 1344555555555433 321
Q ss_pred eEEEec------CcccccCCCcEEEEeCC
Q 015897 159 EVKIGI------NPYELFEDAEWALLIGA 181 (398)
Q Consensus 159 ~v~i~~------~~~eal~dADiViitag 181 (398)
++.... +..+.++++|+||.+..
T Consensus 92 ~i~~~~~~i~~~~~~~~~~~~D~Vi~~~d 120 (202)
T TIGR02356 92 QVTALKERVTAENLELLINNVDLVLDCTD 120 (202)
T ss_pred EEEEehhcCCHHHHHHHHhCCCEEEECCC
Confidence 222111 12345889999988754
No 362
>PRK08628 short chain dehydrogenase; Provisional
Probab=94.09 E-value=1.2 Score=41.93 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
..+|.|+||+|.+|.+++..|+..|.
T Consensus 7 ~~~ilItGasggiG~~la~~l~~~G~ 32 (258)
T PRK08628 7 DKVVIVTGGASGIGAAISLRLAEEGA 32 (258)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCC
Confidence 35899999999999999999998875
No 363
>PRK12742 oxidoreductase; Provisional
Probab=94.09 E-value=0.38 Score=44.49 Aligned_cols=26 Identities=12% Similarity=0.157 Sum_probs=23.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.++|.|+||+|.||..++..|+..|.
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~ 31 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGA 31 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC
Confidence 35899999999999999999998774
No 364
>PRK12320 hypothetical protein; Provisional
Probab=94.08 E-value=0.092 Score=57.65 Aligned_cols=100 Identities=13% Similarity=0.115 Sum_probs=57.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEecCcccccCCCcE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGINPYELFEDAEW 175 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~~~~eal~dADi 175 (398)
|||.|+||+|++|++++..|+..|. .|.. + |+.... +.+....+ ..++.-. ...++++++|+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~-----~Vi~--l--dr~~~~-------~~~~~ve~v~~Dl~d~-~l~~al~~~D~ 63 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH-----TVSG--I--AQHPHD-------ALDPRVDYVCASLRNP-VLQELAGEADA 63 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-----EEEE--E--eCChhh-------cccCCceEEEccCCCH-HHHHHhcCCCE
Confidence 4899999999999999999998774 2432 2 433221 01000000 0011000 12345678999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
||.+++... . +....|..-...+.+.+++. +.++|.+|
T Consensus 64 VIHLAa~~~--~----~~~~vNv~Gt~nLleAA~~~---GvRiV~~S 101 (699)
T PRK12320 64 VIHLAPVDT--S----APGGVGITGLAHVANAAARA---GARLLFVS 101 (699)
T ss_pred EEEcCccCc--c----chhhHHHHHHHHHHHHHHHc---CCeEEEEE
Confidence 999886421 1 11235777777778777764 24566555
No 365
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.05 E-value=0.76 Score=43.31 Aligned_cols=26 Identities=15% Similarity=0.066 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.++|.|+||+|.+|..++..|+..|.
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G~ 40 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAGA 40 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC
Confidence 46899999999999999999998775
No 366
>PRK07589 ornithine cyclodeaminase; Validated
Probab=94.01 E-value=0.17 Score=51.11 Aligned_cols=74 Identities=16% Similarity=0.079 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
...+++||| +|..+...+..++.-.-+. +|.+ + +++.++++..+.++.+. ..++.+..+.++++++||
T Consensus 128 da~~l~iiG-aG~QA~~~l~a~~~vr~i~---~V~v--~--~r~~~~a~~~~~~~~~~----~~~v~~~~~~~~av~~AD 195 (346)
T PRK07589 128 DSRTMALIG-NGAQSEFQALAFKALLGIE---EIRL--Y--DIDPAATAKLARNLAGP----GLRIVACRSVAEAVEGAD 195 (346)
T ss_pred CCcEEEEEC-CcHHHHHHHHHHHHhCCce---EEEE--E--eCCHHHHHHHHHHHHhc----CCcEEEeCCHHHHHhcCC
Confidence 357999999 5999988776665432222 3543 3 78889998888888752 124666678899999999
Q ss_pred EEEEeC
Q 015897 175 WALLIG 180 (398)
Q Consensus 175 iViita 180 (398)
+|+.+-
T Consensus 196 IIvtaT 201 (346)
T PRK07589 196 IITTVT 201 (346)
T ss_pred EEEEec
Confidence 999854
No 367
>PRK06701 short chain dehydrogenase; Provisional
Probab=93.99 E-value=0.94 Score=43.98 Aligned_cols=116 Identities=11% Similarity=-0.014 Sum_probs=62.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccch-hhHHHHHHHHhhhcCCCcceEE-EecC--cc----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSL-QALEGVAMELEDSLFPLLREVK-IGIN--PY---- 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~-~~l~g~a~DL~d~~~~~~~~v~-i~~~--~~---- 167 (398)
.++|.|+||+|.+|.+++..|+..|. .+.+ + +++. +.++....+++... .++. +..| +.
T Consensus 46 ~k~iLItGasggIG~~la~~l~~~G~-----~V~l--~--~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~ 112 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAKEGA-----DIAI--V--YLDEHEDANETKQRVEKEG----VKCLLIPGDVSDEAFCK 112 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-----EEEE--E--eCCcchHHHHHHHHHHhcC----CeEEEEEccCCCHHHHH
Confidence 46899999999999999999998774 2443 3 3332 22333333333211 1111 1111 11
Q ss_pred -------cccCCCcEEEEeCCCCC--CCC--Cch---hhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 168 -------ELFEDAEWALLIGAKPR--GPG--MER---AGLLDINGQIFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 168 -------eal~dADiViitag~~r--k~g--~~r---~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
+.+...|+||..+|... .+- .+. ...+..|..-...+.+.+.++-.+++.+|+++.-
T Consensus 113 ~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~ 183 (290)
T PRK06701 113 DAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSI 183 (290)
T ss_pred HHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence 11235799999887532 111 111 2346666665566665555432245667777653
No 368
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=93.99 E-value=0.15 Score=49.28 Aligned_cols=109 Identities=16% Similarity=0.079 Sum_probs=60.0
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ec--Cc----cccc
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GI--NP----YELF 170 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~--~~----~eal 170 (398)
||.|+||+|++|..++..|+..+. .+.+ + +...........++.+. . .+.. .. .+ .+++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~-----~V~~--~--~~~~~~~~~~~~~~~~~--~---~~~~~~~D~~~~~~~~~~~ 66 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH-----EVVV--L--DNLSNGSPEALKRGERI--T---RVTFVEGDLRDRELLDRLF 66 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC-----eEEE--E--eCCCccchhhhhhhccc--c---ceEEEECCCCCHHHHHHHH
Confidence 689999999999999999998764 2432 2 22111111011111110 0 1111 11 11 2233
Q ss_pred --CCCcEEEEeCCCCCCC--CCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 171 --EDAEWALLIGAKPRGP--GMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 171 --~dADiViitag~~rk~--g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
.+.|+||.++|..+.+ .....+.+..|+.....+.+.+.+. +. ..+++++
T Consensus 67 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~~v~~s 120 (328)
T TIGR01179 67 EEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GV-KKFIFSS 120 (328)
T ss_pred HhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CC-CEEEEec
Confidence 2689999998764322 1233455677888888888887774 32 3444444
No 369
>PRK05872 short chain dehydrogenase; Provisional
Probab=93.97 E-value=0.74 Score=44.77 Aligned_cols=78 Identities=22% Similarity=0.169 Sum_probs=48.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec---------C
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI---------N 165 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~---------~ 165 (398)
.+++.|+||+|.+|..++..|+..|. .|.+ .+++++.++..+.++.+.. ... ....++. .
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~-----~V~~----~~r~~~~l~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~ 78 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGA-----KLAL----VDLEEAELAALAAELGGDD-RVLTVVADVTDLAAMQAAAEE 78 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHhcCCC-cEEEEEecCCCHHHHHHHHHH
Confidence 35899999999999999999999875 2443 3677777776666654211 000 0011111 0
Q ss_pred cccccCCCcEEEEeCCCC
Q 015897 166 PYELFEDAEWALLIGAKP 183 (398)
Q Consensus 166 ~~eal~dADiViitag~~ 183 (398)
..+.+...|+||..+|..
T Consensus 79 ~~~~~g~id~vI~nAG~~ 96 (296)
T PRK05872 79 AVERFGGIDVVVANAGIA 96 (296)
T ss_pred HHHHcCCCCEEEECCCcC
Confidence 012235689999998864
No 370
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=93.95 E-value=0.22 Score=44.54 Aligned_cols=67 Identities=16% Similarity=0.105 Sum_probs=40.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
.+||.|+|| |.+|...+..|+..+. .|.+ ++.+..++ + .++.. . .+....-..+++.++|+
T Consensus 13 ~~~vlVvGG-G~va~rka~~Ll~~ga-----~V~V--Isp~~~~~-l----~~l~~----i--~~~~~~~~~~dl~~a~l 73 (157)
T PRK06719 13 NKVVVIIGG-GKIAYRKASGLKDTGA-----FVTV--VSPEICKE-M----KELPY----I--TWKQKTFSNDDIKDAHL 73 (157)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-----EEEE--EcCccCHH-H----HhccC----c--EEEecccChhcCCCceE
Confidence 469999995 9999999999998764 2543 22222211 1 12210 0 12222234567999999
Q ss_pred EEEeCC
Q 015897 176 ALLIGA 181 (398)
Q Consensus 176 Viitag 181 (398)
||.+-+
T Consensus 74 ViaaT~ 79 (157)
T PRK06719 74 IYAATN 79 (157)
T ss_pred EEECCC
Confidence 888643
No 371
>PRK07201 short chain dehydrogenase; Provisional
Probab=93.92 E-value=0.6 Score=50.46 Aligned_cols=113 Identities=12% Similarity=0.091 Sum_probs=65.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ec--Cccc----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GI--NPYE---- 168 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~--~~~e---- 168 (398)
.+++.|+||+|.+|.+++..|+..|. .|.+ .+++++.++....++.... . ++.+ .. .+.+
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~~~~-~---~~~~~~~Dv~~~~~~~~ 437 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-----TVFL----VARNGEALDELVAEIRAKG-G---TAHAYTCDLTDSAAVDH 437 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-----EEEE----EECCHHHHHHHHHHHHhcC-C---cEEEEEecCCCHHHHHH
Confidence 35899999999999999999998874 2443 3677777776666654321 1 1111 11 1121
Q ss_pred -------ccCCCcEEEEeCCCCCCCC---C-----chhhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 169 -------LFEDAEWALLIGAKPRGPG---M-----ERAGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 169 -------al~dADiViitag~~rk~g---~-----~r~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+...|++|..+|...... . +-...+..|.. +.+.+.+.+.+. ..+.||+++-
T Consensus 438 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~g~iv~isS 509 (657)
T PRK07201 438 TVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER--RFGHVVNVSS 509 (657)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--CCCEEEEECC
Confidence 2236899999988642111 0 11223455544 344455555553 4567777763
No 372
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=93.92 E-value=0.19 Score=55.18 Aligned_cols=46 Identities=33% Similarity=0.364 Sum_probs=34.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
.++|.|+||+|.||.+++..|+..|. .|.+ .+++.+.++....++.
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga-----~Vvi----~~r~~~~~~~~~~~l~ 459 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGA-----HVVL----ADLNLEAAEAVAAEIN 459 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC-----EEEE----EeCCHHHHHHHHHHHH
Confidence 36899999999999999999998875 2443 3566666665555554
No 373
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=93.92 E-value=0.21 Score=48.76 Aligned_cols=98 Identities=16% Similarity=0.199 Sum_probs=54.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
|||.|+||+|.+|+++...|...+. ++.. .++. -.|+.|.. . + ....++ .+-|+|
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~-----~v~~----~~r~-------~~dl~d~~-~------~-~~~~~~-~~pd~V 55 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY-----EVIA----TSRS-------DLDLTDPE-A------V-AKLLEA-FKPDVV 55 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE-----EEEE----ESTT-------CS-TTSHH-H------H-HHHHHH-H--SEE
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC-----EEEE----eCch-------hcCCCCHH-H------H-HHHHHH-hCCCeE
Confidence 7999999999999999999887663 1221 1221 01111110 0 0 000111 146789
Q ss_pred EEeCCCCCCCC--CchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 177 LLIGAKPRGPG--MERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 177 iitag~~rk~g--~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
|.+++...... .+.......|......+++.+.+. ++++|-+|
T Consensus 56 in~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~---~~~li~~S 100 (286)
T PF04321_consen 56 INCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER---GARLIHIS 100 (286)
T ss_dssp EE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC---T-EEEEEE
T ss_pred eccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc---CCcEEEee
Confidence 99987642111 234566778889999999988874 67777666
No 374
>PRK08226 short chain dehydrogenase; Provisional
Probab=93.91 E-value=0.58 Score=44.15 Aligned_cols=26 Identities=15% Similarity=0.048 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.+++.|+||+|.+|.+++..|+..|.
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~ 31 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGA 31 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC
Confidence 36899999999999999999998875
No 375
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=93.90 E-value=0.11 Score=53.56 Aligned_cols=73 Identities=15% Similarity=0.174 Sum_probs=51.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
..||.|+|| |.+|..++..|...|.- .|.+ ..++.++++..+.++... .+....+.++.+.++|+
T Consensus 181 ~kkvlviGa-G~~a~~va~~L~~~g~~----~I~V----~nRt~~ra~~La~~~~~~------~~~~~~~l~~~l~~aDi 245 (414)
T PRK13940 181 SKNVLIIGA-GQTGELLFRHVTALAPK----QIML----ANRTIEKAQKITSAFRNA------SAHYLSELPQLIKKADI 245 (414)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCC----EEEE----ECCCHHHHHHHHHHhcCC------eEecHHHHHHHhccCCE
Confidence 468999995 99999999999987762 2544 477777777666654311 12122345788999999
Q ss_pred EEEeCCCC
Q 015897 176 ALLIGAKP 183 (398)
Q Consensus 176 Viitag~~ 183 (398)
||.+-+.|
T Consensus 246 VI~aT~a~ 253 (414)
T PRK13940 246 IIAAVNVL 253 (414)
T ss_pred EEECcCCC
Confidence 99987655
No 376
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.87 E-value=1.2 Score=41.43 Aligned_cols=113 Identities=10% Similarity=-0.012 Sum_probs=60.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEE-Eec--Ccc------
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVK-IGI--NPY------ 167 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~-i~~--~~~------ 167 (398)
+.+.|+||+|.+|.+++..|+..|. .+.+ . .+.+....+....++.... .++. +.. .++
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G~-----~vv~--~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~ 71 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDGF-----KVVA--G-CGPNSPRRVKWLEDQKALG----FDFIASEGNVGDWDSTKAA 71 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC-----EEEE--E-cCCChHHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHH
Confidence 4789999999999999999999874 2333 1 1333333333334433211 1111 111 111
Q ss_pred -----cccCCCcEEEEeCCCCCC-CC--Cch---hhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 168 -----ELFEDAEWALLIGAKPRG-PG--MER---AGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 168 -----eal~dADiViitag~~rk-~g--~~r---~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+.+...|+||.++|.... +. .+. ...+..|.. +.+.+.+.+.+. ..+.+++++-
T Consensus 72 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~isS 140 (246)
T PRK12938 72 FDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER--GWGRIINISS 140 (246)
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEEec
Confidence 223468999999886532 11 111 223455544 345555555542 4467777764
No 377
>PRK08818 prephenate dehydrogenase; Provisional
Probab=93.86 E-value=0.32 Score=49.60 Aligned_cols=86 Identities=14% Similarity=0.178 Sum_probs=51.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
.+||+|||.+|.+|..++..|.... + ..+. +.|++ |. ...+..+.+++||+
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~--~----~~V~--g~D~~------------d~---------~~~~~~~~v~~aDl 54 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRM--Q----LEVI--GHDPA------------DP---------GSLDPATLLQRADV 54 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcC--C----CEEE--EEcCC------------cc---------ccCCHHHHhcCCCE
Confidence 4699999955999999999998651 2 2222 23542 11 11245677899999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
||++.- ...+.+++.++++..... +|+++|.-++-
T Consensus 55 VilavP------------v~~~~~~l~~l~~~~~~l-~~~~iVtDVgS 89 (370)
T PRK08818 55 LIFSAP------------IRHTAALIEEYVALAGGR-AAGQLWLDVTS 89 (370)
T ss_pred EEEeCC------------HHHHHHHHHHHhhhhcCC-CCCeEEEECCC
Confidence 999853 223344444444332112 46666665553
No 378
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=93.85 E-value=0.23 Score=49.99 Aligned_cols=70 Identities=27% Similarity=0.360 Sum_probs=41.1
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEEE
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWAL 177 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiVi 177 (398)
||+|+||+|.+|..++..|...+. . .+.|.++-.+.+.. ....+. ..+..+..-+.++++++|+||
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~h-p---~~~l~~~as~~~~g----~~~~~~------~~~~~~~~~~~~~~~~~D~v~ 66 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNF-P---IDKLVLLASDRSAG----RKVTFK------GKELEVNEAKIESFEGIDIAL 66 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCC-C---hhhEEEEeccccCC----CeeeeC------CeeEEEEeCChHHhcCCCEEE
Confidence 689999999999999998887543 1 13333222222111 111111 112333323456789999999
Q ss_pred EeCC
Q 015897 178 LIGA 181 (398)
Q Consensus 178 itag 181 (398)
++.|
T Consensus 67 ~a~g 70 (339)
T TIGR01296 67 FSAG 70 (339)
T ss_pred ECCC
Confidence 9876
No 379
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=93.85 E-value=0.27 Score=41.39 Aligned_cols=23 Identities=35% Similarity=0.527 Sum_probs=19.9
Q ss_pred EEEEEcCCCchHHHHHHHHHhcC
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGE 120 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~ 120 (398)
||+|+|++|.+|..++..|....
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~ 23 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHP 23 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCC
Confidence 68999988999999988888753
No 380
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.81 E-value=1.1 Score=42.27 Aligned_cols=118 Identities=9% Similarity=0.051 Sum_probs=62.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEecCc--------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGINP-------- 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~~~-------- 166 (398)
.+++.|+||+|.+|.+++..|+..|. .+++ .. ..+.+.++....++........ ....++ +.
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~~~G~-----~vvi--~~-~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~-~~~~i~~~~~ 77 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFGKEKA-----KVVI--NY-RSDEEEANDVAEEIKKAGGEAIAVKGDVT-VESDVVNLIQ 77 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-----EEEE--Ee-CCCHHHHHHHHHHHHHcCCeEEEEEecCC-CHHHHHHHHH
Confidence 46899999999999999999998874 2433 11 2233444444555543210000 011111 11
Q ss_pred --ccccCCCcEEEEeCCCCCC-C--CCchh---hhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 --YELFEDAEWALLIGAKPRG-P--GMERA---GLLDINGQ----IFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 --~eal~dADiViitag~~rk-~--g~~r~---dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+...|++|..+|.... + ..+.. ..+..|.. +.+...+.+.+. ...+.+|+++-
T Consensus 78 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-~~~g~iv~~sS 145 (261)
T PRK08936 78 TAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEH-DIKGNIINMSS 145 (261)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCcEEEEEcc
Confidence 1123457999998876421 1 11222 23455532 334555566654 34577777764
No 381
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=93.81 E-value=1.3 Score=42.56 Aligned_cols=68 Identities=26% Similarity=0.342 Sum_probs=40.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
|+||+|+|++|.+|..++..+...+-+ +++- + +|.+.++.... . .. .+..+.+..+.++++|+
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~----elva-v--~d~~~~~~~~~----~----~~--~i~~~~dl~~ll~~~Dv 63 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDL----ELVA-A--VDRPGSPLVGQ----G----AL--GVAITDDLEAVLADADV 63 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCC----EEEE-E--EecCCcccccc----C----CC--CccccCCHHHhccCCCE
Confidence 579999997699999999877654321 2332 2 35544433221 1 11 23334455555678999
Q ss_pred EEEeC
Q 015897 176 ALLIG 180 (398)
Q Consensus 176 Viita 180 (398)
||...
T Consensus 64 Vid~t 68 (257)
T PRK00048 64 LIDFT 68 (257)
T ss_pred EEECC
Confidence 98553
No 382
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=93.76 E-value=0.36 Score=48.08 Aligned_cols=66 Identities=14% Similarity=0.132 Sum_probs=41.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
.+||+||| .|++|.+++..|...++ .+.+. .+.+.+.++... + + . +.. .+..+++++||+
T Consensus 3 ~kkIgiIG-~G~mG~AiA~~L~~sG~-----~Viv~---~~~~~~~~~~a~-~--~---G----v~~-~s~~ea~~~ADi 62 (314)
T TIGR00465 3 GKTVAIIG-YGSQGHAQALNLRDSGL-----NVIVG---LRKGGASWKKAT-E--D---G----FKV-GTVEEAIPQADL 62 (314)
T ss_pred cCEEEEEe-EcHHHHHHHHHHHHCCC-----eEEEE---ECcChhhHHHHH-H--C---C----CEE-CCHHHHHhcCCE
Confidence 36899999 59999999999998875 23321 133323322111 1 1 1 122 246778899999
Q ss_pred EEEeCC
Q 015897 176 ALLIGA 181 (398)
Q Consensus 176 Viitag 181 (398)
|+++..
T Consensus 63 VvLaVp 68 (314)
T TIGR00465 63 IMNLLP 68 (314)
T ss_pred EEEeCC
Confidence 999853
No 383
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=93.74 E-value=0.19 Score=49.03 Aligned_cols=61 Identities=16% Similarity=0.212 Sum_probs=41.4
Q ss_pred EEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEEEEeC
Q 015897 101 VSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIG 180 (398)
Q Consensus 101 IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiViita 180 (398)
||| .|.+|..++..|+..+. ++.+ + |++.++++... +.. .....+..++++++|+||++.
T Consensus 1 ~IG-lG~mG~~mA~~L~~~G~-----~V~v--~--dr~~~~~~~l~----~~g------~~~~~s~~~~~~~advVil~v 60 (288)
T TIGR01692 1 FIG-LGNMGGPMAANLLKAGH-----PVRV--F--DLFPDAVEEAV----AAG------AQAAASPAEAAEGADRVITML 60 (288)
T ss_pred CCc-ccHhHHHHHHHHHhCCC-----eEEE--E--eCCHHHHHHHH----HcC------CeecCCHHHHHhcCCEEEEeC
Confidence 589 59999999999998774 2443 3 66666554332 111 223445678899999999985
Q ss_pred C
Q 015897 181 A 181 (398)
Q Consensus 181 g 181 (398)
.
T Consensus 61 p 61 (288)
T TIGR01692 61 P 61 (288)
T ss_pred C
Confidence 3
No 384
>PRK07831 short chain dehydrogenase; Provisional
Probab=93.66 E-value=1.3 Score=41.77 Aligned_cols=47 Identities=21% Similarity=0.145 Sum_probs=34.1
Q ss_pred CCEEEEEcCCC-chHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhh
Q 015897 96 MVNIAVSGAAG-MIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELED 151 (398)
Q Consensus 96 ~~KI~IiGA~G-~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d 151 (398)
.+++.|+||+| .+|..++..|+..|. .|.+ .|++.++++....+++.
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G~-----~V~~----~~~~~~~~~~~~~~~~~ 64 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEGA-----RVVI----SDIHERRLGETADELAA 64 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcCC-----EEEE----EeCCHHHHHHHHHHHHH
Confidence 45899999877 699999999998875 2443 36666666655555543
No 385
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=93.65 E-value=0.12 Score=52.51 Aligned_cols=73 Identities=21% Similarity=0.278 Sum_probs=44.7
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecC----cccccCCCc
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGIN----PYELFEDAE 174 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~----~~eal~dAD 174 (398)
|.|+|| |.+|+.++..|+...-+. .+.+ .|++.++++..+.++.. .....+.+... ..+.++++|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~---~v~v----a~r~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~l~~~~~~~d 69 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFE---EVTV----ADRNPEKAERLAEKLLG---DRVEAVQVDVNDPESLAELLRGCD 69 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE----EEEE----EESSHHHHHHHHT--TT---TTEEEEE--TTTHHHHHHHHTTSS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCC---cEEE----EECCHHHHHHHHhhccc---cceeEEEEecCCHHHHHHHHhcCC
Confidence 789997 999999999999876532 2444 48888888877655411 11111222222 245789999
Q ss_pred EEEEeCCC
Q 015897 175 WALLIGAK 182 (398)
Q Consensus 175 iViitag~ 182 (398)
+||.+++.
T Consensus 70 vVin~~gp 77 (386)
T PF03435_consen 70 VVINCAGP 77 (386)
T ss_dssp EEEE-SSG
T ss_pred EEEECCcc
Confidence 99999864
No 386
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=93.64 E-value=0.96 Score=44.82 Aligned_cols=127 Identities=16% Similarity=0.166 Sum_probs=66.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcc------c
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPY------E 168 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~------e 168 (398)
+++||+||| +|++|..++..+....-+ ++.- +.|+|.+...+ ..+.++. . + .+.+++ .
T Consensus 3 ~klrVAIIG-tG~IGt~hm~~l~~~~~v----elvA-Vvdid~es~gl-a~A~~~G--i-~------~~~~~ie~LL~~~ 66 (302)
T PRK08300 3 SKLKVAIIG-SGNIGTDLMIKILRSEHL----EPGA-MVGIDPESDGL-ARARRLG--V-A------TSAEGIDGLLAMP 66 (302)
T ss_pred CCCeEEEEc-CcHHHHHHHHHHhcCCCc----EEEE-EEeCChhhHHH-HHHHHcC--C-C------cccCCHHHHHhCc
Confidence 457999999 699999988887764322 2332 34444321111 2233221 1 1 111111 2
Q ss_pred ccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch--------hHHHHHHHHCCCCC
Q 015897 169 LFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN--------TNALICLKNAPSIP 240 (398)
Q Consensus 169 al~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d--------~~t~~~~k~~~~~~ 240 (398)
++.+.|+|+++.+ ...-.+.++.+.+ .++.++--.|.. ++...+. ..+
T Consensus 67 ~~~dIDiVf~AT~----------------a~~H~e~a~~a~e----aGk~VID~sPA~~~PlvVP~VN~~~~~----~~~ 122 (302)
T PRK08300 67 EFDDIDIVFDATS----------------AGAHVRHAAKLRE----AGIRAIDLTPAAIGPYCVPAVNLDEHL----DAP 122 (302)
T ss_pred CCCCCCEEEECCC----------------HHHHHHHHHHHHH----cCCeEEECCccccCCcccCcCCHHHHh----ccc
Confidence 3468999999754 2345556655554 233344444665 3333332 222
Q ss_pred CceEEecCchhHHHHHHHHHH
Q 015897 241 AKNFHALTRLDENRAKCQLAL 261 (398)
Q Consensus 241 ~kvig~gt~lDs~Rl~~~lA~ 261 (398)
..++.+|...-++.+-..|.+
T Consensus 123 ~~~iia~p~~ati~~v~Al~~ 143 (302)
T PRK08300 123 NVNMVTCGGQATIPIVAAVSR 143 (302)
T ss_pred CCCEEECccHHHHHHHHHhcc
Confidence 245667666556666666655
No 387
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=93.63 E-value=0.33 Score=50.00 Aligned_cols=73 Identities=25% Similarity=0.268 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
+..|+.|||| |-+|.-.+..|...|+.. |.+ ..++.++++..+.++. ..+.-..+..+.+.++|
T Consensus 177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~----i~I----aNRT~erA~~La~~~~-------~~~~~l~el~~~l~~~D 240 (414)
T COG0373 177 KDKKVLVIGA-GEMGELVAKHLAEKGVKK----ITI----ANRTLERAEELAKKLG-------AEAVALEELLEALAEAD 240 (414)
T ss_pred ccCeEEEEcc-cHHHHHHHHHHHhCCCCE----EEE----EcCCHHHHHHHHHHhC-------CeeecHHHHHHhhhhCC
Confidence 3468999995 999999999999999732 544 4788888887777765 12222345688999999
Q ss_pred EEEEeCCCC
Q 015897 175 WALLIGAKP 183 (398)
Q Consensus 175 iViitag~~ 183 (398)
+||.+-+.|
T Consensus 241 vVissTsa~ 249 (414)
T COG0373 241 VVISSTSAP 249 (414)
T ss_pred EEEEecCCC
Confidence 999976554
No 388
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=93.62 E-value=0.43 Score=47.63 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=37.4
Q ss_pred hHHHHHHHHHhcCcCCCCCceEEEecccccchhhHH-HHHHHHhhhcCCCcceEEEecCcccccCCCcEEEEeCC
Q 015897 108 IANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALE-GVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGA 181 (398)
Q Consensus 108 vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~-g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiViitag 181 (398)
-|+.+|..|+..|. ++.+ + |++.++++ ..+..+.+.. .....+..++.++||+||++-.
T Consensus 31 gGspMArnLlkAGh-----eV~V--~--Drnrsa~e~e~~e~LaeaG------A~~AaS~aEAAa~ADVVIL~LP 90 (341)
T TIGR01724 31 GGSRMAIEFAMAGH-----DVVL--A--EPNREFMSDDLWKKVEDAG------VKVVSDDKEAAKHGEIHVLFTP 90 (341)
T ss_pred CHHHHHHHHHHCCC-----EEEE--E--eCChhhhhhhhhHHHHHCC------CeecCCHHHHHhCCCEEEEecC
Confidence 37889999988875 3443 4 56555442 2333444322 2344567899999999998743
No 389
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=93.58 E-value=0.34 Score=46.86 Aligned_cols=73 Identities=12% Similarity=0.121 Sum_probs=48.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
.+++.|+|+ |.+|.+++..|+..+. .+.+ .+++.++++..+.++.... .+.....+...+.++|+
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g~-----~v~v----~~R~~~~~~~la~~~~~~~-----~~~~~~~~~~~~~~~Di 181 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKADC-----NVII----ANRTVSKAEELAERFQRYG-----EIQAFSMDELPLHRVDL 181 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHhhcC-----ceEEechhhhcccCccE
Confidence 568999995 9999999999998763 2443 3677777777776654311 11121222334568999
Q ss_pred EEEeCCCC
Q 015897 176 ALLIGAKP 183 (398)
Q Consensus 176 Viitag~~ 183 (398)
||.+.+..
T Consensus 182 vInatp~g 189 (270)
T TIGR00507 182 IINATSAG 189 (270)
T ss_pred EEECCCCC
Confidence 99976543
No 390
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=93.55 E-value=0.36 Score=45.03 Aligned_cols=103 Identities=19% Similarity=0.194 Sum_probs=58.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE--ecCcccccCCC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI--GINPYELFEDA 173 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i--~~~~~eal~dA 173 (398)
..||.|||+ |.+|..-+..|+..|- .|.+ ++.+.. +.++ ++.+.. ++.. ..-..+++.++
T Consensus 9 gk~vlVvGg-G~va~rk~~~Ll~~ga-----~VtV--vsp~~~-~~l~----~l~~~~-----~i~~~~~~~~~~dl~~~ 70 (205)
T TIGR01470 9 GRAVLVVGG-GDVALRKARLLLKAGA-----QLRV--IAEELE-SELT----LLAEQG-----GITWLARCFDADILEGA 70 (205)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCC-----EEEE--EcCCCC-HHHH----HHHHcC-----CEEEEeCCCCHHHhCCc
Confidence 359999995 9999999999998774 2443 333332 1222 222111 2332 22235678999
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCC--chhHHHHHHH
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNP--CNTNALICLK 234 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP--~d~~t~~~~k 234 (398)
|+||.+-+.+ .-|. .+....++ .+..|-++++| +|.+.+...+
T Consensus 71 ~lVi~at~d~-----------~ln~----~i~~~a~~---~~ilvn~~d~~e~~~f~~pa~~~ 115 (205)
T TIGR01470 71 FLVIAATDDE-----------ELNR----RVAHAARA---RGVPVNVVDDPELCSFIFPSIVD 115 (205)
T ss_pred EEEEECCCCH-----------HHHH----HHHHHHHH---cCCEEEECCCcccCeEEEeeEEE
Confidence 9998875532 1233 33333333 35556667888 5555544433
No 391
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=93.52 E-value=0.27 Score=49.48 Aligned_cols=25 Identities=20% Similarity=0.211 Sum_probs=22.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
..||.|+|| |.+|+.++..|+..|+
T Consensus 24 ~~~VlVvG~-GglGs~va~~La~aGv 48 (339)
T PRK07688 24 EKHVLIIGA-GALGTANAEMLVRAGV 48 (339)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC
Confidence 358999995 9999999999999987
No 392
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=93.52 E-value=1.3 Score=40.96 Aligned_cols=117 Identities=14% Similarity=0.066 Sum_probs=59.6
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEec---------Ccc
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGI---------NPY 167 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~---------~~~ 167 (398)
.+.|+||+|.+|.+++..|+..|. .+.+ ... .+.+.++....++....... .....++. ...
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~-----~v~~--~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 73 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDGY-----RVAA--NCG-PNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVE 73 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC-----EEEE--EeC-CCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHH
Confidence 578999999999999999998775 2333 111 13444443333332111000 00111110 011
Q ss_pred cccCCCcEEEEeCCCCCCC---CCc---hhhhHHHHHH----HHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 168 ELFEDAEWALLIGAKPRGP---GME---RAGLLDINGQ----IFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 168 eal~dADiViitag~~rk~---g~~---r~dll~~N~~----i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
+.+...|+||.++|..... ..+ -...+..|.. +.+.+.+.+++. ..+.+++++-.
T Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~iss~ 138 (242)
T TIGR01829 74 AELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER--GWGRIINISSV 138 (242)
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCcEEEEEcch
Confidence 2245689999988764311 111 1223444544 344455555553 45677777743
No 393
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=93.50 E-value=0.3 Score=49.18 Aligned_cols=25 Identities=28% Similarity=0.402 Sum_probs=21.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
+||+|+||+|.+|..++..|.....
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~ 25 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPE 25 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCC
Confidence 5899999999999999999886543
No 394
>PRK05693 short chain dehydrogenase; Provisional
Probab=93.49 E-value=0.95 Score=43.13 Aligned_cols=26 Identities=19% Similarity=0.212 Sum_probs=23.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
|+++.|+||+|.+|..++..|+..|.
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~ 26 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGY 26 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCC
Confidence 45899999999999999999988764
No 395
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=93.48 E-value=0.43 Score=46.38 Aligned_cols=95 Identities=17% Similarity=0.108 Sum_probs=60.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccc--cCCCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYEL--FEDAE 174 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~ea--l~dAD 174 (398)
+||+||| .|.+|..++..|......+ +.|..+ .|++.++.+..+.. +.+.++ .++ ..+.|
T Consensus 3 ~rvgiIG-~GaIG~~va~~l~~~~~~~----~~l~~V-~~~~~~~~~~~~~~-----------~~~~~~-l~~ll~~~~D 64 (267)
T PRK13301 3 HRIAFIG-LGAIASDVAAGLLADAAQP----CQLAAL-TRNAADLPPALAGR-----------VALLDG-LPGLLAWRPD 64 (267)
T ss_pred eEEEEEC-ccHHHHHHHHHHhcCCCCc----eEEEEE-ecCCHHHHHHhhcc-----------CcccCC-HHHHhhcCCC
Confidence 6999999 5999999999987654321 333222 35555444433321 112233 344 37899
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
+||-+++ .+.+++++..+=+. +.+-+++-++==.|
T Consensus 65 lVVE~A~----------------~~av~e~~~~iL~~-g~dlvv~SvGALaD 99 (267)
T PRK13301 65 LVVEAAG----------------QQAIAEHAEGCLTA-GLDMIICSAGALAD 99 (267)
T ss_pred EEEECCC----------------HHHHHHHHHHHHhc-CCCEEEEChhHhcC
Confidence 9999997 47899999988874 45666655553344
No 396
>PRK13243 glyoxylate reductase; Reviewed
Probab=93.44 E-value=0.18 Score=50.52 Aligned_cols=90 Identities=14% Similarity=0.135 Sum_probs=53.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
++|+||| .|.||..++..|...|. .|. .+ |++.+... ..+ . . +. ..+..+.+++||+|
T Consensus 151 ktvgIiG-~G~IG~~vA~~l~~~G~-----~V~--~~--d~~~~~~~--~~~--~---~----~~-~~~l~ell~~aDiV 208 (333)
T PRK13243 151 KTIGIIG-FGRIGQAVARRAKGFGM-----RIL--YY--SRTRKPEA--EKE--L---G----AE-YRPLEELLRESDFV 208 (333)
T ss_pred CEEEEEC-cCHHHHHHHHHHHHCCC-----EEE--EE--CCCCChhh--HHH--c---C----CE-ecCHHHHHhhCCEE
Confidence 6999999 59999999999987664 243 23 44432211 111 1 1 11 13567889999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
++...... + +-.++.+ +.+... .+++++||++
T Consensus 209 ~l~lP~t~----~-------T~~~i~~--~~~~~m-k~ga~lIN~a 240 (333)
T PRK13243 209 SLHVPLTK----E-------TYHMINE--ERLKLM-KPTAILVNTA 240 (333)
T ss_pred EEeCCCCh----H-------HhhccCH--HHHhcC-CCCeEEEECc
Confidence 99753210 1 1122211 233443 6899999987
No 397
>PRK12367 short chain dehydrogenase; Provisional
Probab=93.39 E-value=0.47 Score=45.14 Aligned_cols=101 Identities=16% Similarity=0.111 Sum_probs=54.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccch-hhHHHHHHHHhhhcCCCcceEEEec--CcccccCC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSL-QALEGVAMELEDSLFPLLREVKIGI--NPYELFED 172 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~-~~l~g~a~DL~d~~~~~~~~v~i~~--~~~eal~d 172 (398)
.+++.|+||+|.+|.+++..|+..|. .+.+ . +++. +.++ .. .+.. .......++. +-.+.+..
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~-----~Vi~--~--~r~~~~~~~-~~---~~~~-~~~~~~D~~~~~~~~~~~~~ 79 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA-----KVIG--L--THSKINNSE-SN---DESP-NEWIKWECGKEESLDKQLAS 79 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-----EEEE--E--ECCchhhhh-hh---ccCC-CeEEEeeCCCHHHHHHhcCC
Confidence 35899999999999999999998875 2433 2 4443 2221 11 1110 0001112211 12345678
Q ss_pred CcEEEEeCCCCCCCCCch---hhhHHHHHH----HHHHHHHHHHH
Q 015897 173 AEWALLIGAKPRGPGMER---AGLLDINGQ----IFAEQGKALNA 210 (398)
Q Consensus 173 ADiViitag~~rk~g~~r---~dll~~N~~----i~~~i~~~i~~ 210 (398)
.|++|..+|.......+. .+.+..|.. +.+.+.+.+.+
T Consensus 80 iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 124 (245)
T PRK12367 80 LDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALN 124 (245)
T ss_pred CCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 999999988642222222 234555654 45555555544
No 398
>PRK07856 short chain dehydrogenase; Provisional
Probab=93.30 E-value=0.24 Score=46.54 Aligned_cols=26 Identities=15% Similarity=0.080 Sum_probs=23.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.+++.|+||+|.+|.+++..|+..|.
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g~ 31 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAGA 31 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC
Confidence 46899999999999999999998774
No 399
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=93.26 E-value=0.22 Score=48.69 Aligned_cols=75 Identities=16% Similarity=0.032 Sum_probs=49.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
..++.|+|| |.+|.++++.|+..|.. .|.+ .+++.++++..+.++.... .. ..+....+..+.+.++|+
T Consensus 125 ~k~vlvlGa-GGaarai~~aL~~~G~~----~i~I----~nRt~~ka~~La~~~~~~~-~~-~~~~~~~~~~~~~~~~Di 193 (282)
T TIGR01809 125 GFRGLVIGA-GGTSRAAVYALASLGVT----DITV----INRNPDKLSRLVDLGVQVG-VI-TRLEGDSGGLAIEKAAEV 193 (282)
T ss_pred CceEEEEcC-cHHHHHHHHHHHHcCCC----eEEE----EeCCHHHHHHHHHHhhhcC-cc-eeccchhhhhhcccCCCE
Confidence 458999995 99999999999988762 2554 3788888888777654321 10 001000112355688999
Q ss_pred EEEeCC
Q 015897 176 ALLIGA 181 (398)
Q Consensus 176 Viitag 181 (398)
||.+-.
T Consensus 194 VInaTp 199 (282)
T TIGR01809 194 LVSTVP 199 (282)
T ss_pred EEECCC
Confidence 998743
No 400
>PRK07574 formate dehydrogenase; Provisional
Probab=93.25 E-value=0.36 Score=49.42 Aligned_cols=93 Identities=17% Similarity=0.216 Sum_probs=54.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
++|+||| .|.||..++..|..-|. .|. .+ |+.....+ ...++ .+....+..+.+++||+|
T Consensus 193 ktVGIvG-~G~IG~~vA~~l~~fG~-----~V~--~~--dr~~~~~~-~~~~~---------g~~~~~~l~ell~~aDvV 252 (385)
T PRK07574 193 MTVGIVG-AGRIGLAVLRRLKPFDV-----KLH--YT--DRHRLPEE-VEQEL---------GLTYHVSFDSLVSVCDVV 252 (385)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-----EEE--EE--CCCCCchh-hHhhc---------CceecCCHHHHhhcCCEE
Confidence 5899999 59999999999887554 232 23 44321111 11111 122234577889999999
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
++..... ..+-.++. .+.+... ++++++||++=
T Consensus 253 ~l~lPlt-----------~~T~~li~--~~~l~~m-k~ga~lIN~aR 285 (385)
T PRK07574 253 TIHCPLH-----------PETEHLFD--ADVLSRM-KRGSYLVNTAR 285 (385)
T ss_pred EEcCCCC-----------HHHHHHhC--HHHHhcC-CCCcEEEECCC
Confidence 9974321 01122221 2334443 68999999873
No 401
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=93.24 E-value=0.34 Score=50.08 Aligned_cols=90 Identities=13% Similarity=0.089 Sum_probs=57.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
-.+|+|+|+ |.+|..++..+...|. .+.+ .|+++.+++ .+.++ ++ .+ ....++++++|+
T Consensus 202 GktVvViG~-G~IG~~va~~ak~~Ga-----~ViV----~d~d~~R~~-~A~~~-----G~--~~---~~~~e~v~~aDV 260 (413)
T cd00401 202 GKVAVVAGY-GDVGKGCAQSLRGQGA-----RVIV----TEVDPICAL-QAAME-----GY--EV---MTMEEAVKEGDI 260 (413)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC-----EEEE----EECChhhHH-HHHhc-----CC--EE---ccHHHHHcCCCE
Confidence 469999995 9999999998887775 2433 366666654 33321 11 11 123577889999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
||.+.|.+ .++..- .+... .+++++++++.+
T Consensus 261 VI~atG~~---------------~~i~~~--~l~~m-k~GgilvnvG~~ 291 (413)
T cd00401 261 FVTTTGNK---------------DIITGE--HFEQM-KDGAIVCNIGHF 291 (413)
T ss_pred EEECCCCH---------------HHHHHH--HHhcC-CCCcEEEEeCCC
Confidence 99886632 233321 13333 589999999986
No 402
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.24 E-value=1.5 Score=43.19 Aligned_cols=119 Identities=15% Similarity=0.074 Sum_probs=64.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec--C-------c
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI--N-------P 166 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~--~-------~ 166 (398)
+++.|+||++.+|.+++..|+..|.. .|.+ .++++++++..+.++........ ....++. + .
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~~----~V~l----~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 75 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGEW----HVIM----ACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQF 75 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCC----EEEE----EeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 37889999999999999999988721 2443 25666666655555532110000 0011110 0 1
Q ss_pred ccccCCCcEEEEeCCCCCC----CCCchh---hhHHHHH----HHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 YELFEDAEWALLIGAKPRG----PGMERA---GLLDING----QIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 ~eal~dADiViitag~~rk----~g~~r~---dll~~N~----~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+...|++|..+|.... +..+.. ..+..|. -+.+.+.+.+.+.....+.||++|-
T Consensus 76 ~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS 143 (314)
T TIGR01289 76 RESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGS 143 (314)
T ss_pred HHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEec
Confidence 1123568999998886321 122221 2344443 3466667777653111367777653
No 403
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=93.22 E-value=0.39 Score=46.02 Aligned_cols=77 Identities=18% Similarity=0.173 Sum_probs=46.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccc-----------------hhhHHHHHHHHhhhcCCCcc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERS-----------------LQALEGVAMELEDSLFPLLR 158 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~-----------------~~~l~g~a~DL~d~~~~~~~ 158 (398)
..||+|+|+ |.+|+.++..|+..|+ ++ +. ++|-|.- ..+++..+..|.... |..
T Consensus 32 ~~~VliiG~-GglGs~va~~La~~Gv-g~---i~--lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~ln-p~v- 102 (245)
T PRK05690 32 AARVLVVGL-GGLGCAASQYLAAAGV-GT---LT--LVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARIN-PHI- 102 (245)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCC-CE---EE--EEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHC-CCC-
Confidence 469999995 9999999999999986 21 33 3444422 234444455555433 321
Q ss_pred eEEEec-----C-cccccCCCcEEEEeCC
Q 015897 159 EVKIGI-----N-PYELFEDAEWALLIGA 181 (398)
Q Consensus 159 ~v~i~~-----~-~~eal~dADiViitag 181 (398)
++.... + ..+.++++|+||.+..
T Consensus 103 ~i~~~~~~i~~~~~~~~~~~~DiVi~~~D 131 (245)
T PRK05690 103 AIETINARLDDDELAALIAGHDLVLDCTD 131 (245)
T ss_pred EEEEEeccCCHHHHHHHHhcCCEEEecCC
Confidence 222111 1 1245789999998854
No 404
>PRK05854 short chain dehydrogenase; Provisional
Probab=93.19 E-value=1.7 Score=42.76 Aligned_cols=114 Identities=15% Similarity=0.099 Sum_probs=64.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-ecC--c------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-GIN--P------ 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~~~--~------ 166 (398)
.+++.|+||+|.||..++..|+..|. .|.+ ..++.++++....+|.... +. .++.. ..| +
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G~-----~Vil----~~R~~~~~~~~~~~l~~~~-~~-~~v~~~~~Dl~d~~sv~~ 82 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAGA-----EVIL----PVRNRAKGEAAVAAIRTAV-PD-AKLSLRALDLSSLASVAA 82 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHHHhC-CC-CceEEEEecCCCHHHHHH
Confidence 46899999999999999999998874 2444 3577777776666665321 11 11111 111 1
Q ss_pred -----ccccCCCcEEEEeCCCCCCC--CCch---hhhHHHHH----HHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 -----YELFEDAEWALLIGAKPRGP--GMER---AGLLDING----QIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 -----~eal~dADiViitag~~rk~--g~~r---~dll~~N~----~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+...|++|..+|....+ ..+. ...+..|. -+.+.+.+.+.+ + .+.||+++-
T Consensus 83 ~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~--~-~~riv~vsS 150 (313)
T PRK05854 83 LGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRA--G-RARVTSQSS 150 (313)
T ss_pred HHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHh--C-CCCeEEEec
Confidence 12234589999988753211 1111 12244443 334555555554 2 456666653
No 405
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=93.17 E-value=1.3 Score=43.50 Aligned_cols=108 Identities=18% Similarity=0.083 Sum_probs=56.2
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchh-hHHHHHHHHhhhcCC---Cc-ceEEEecCc------
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQ-ALEGVAMELEDSLFP---LL-REVKIGINP------ 166 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~-~l~g~a~DL~d~~~~---~~-~~v~i~~~~------ 166 (398)
+|.|+||+|++|++++..|+..+... .|.. +..+.+.+ ..+.....+...... .. .++.+...+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~---~V~~--l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQA---KVIC--LVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCC---EEEE--EEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence 58899999999999999999876311 1322 21222211 111111111111000 00 122222111
Q ss_pred -------ccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHh
Q 015897 167 -------YELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAV 211 (398)
Q Consensus 167 -------~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~ 211 (398)
.+..+++|+||.+++... ....-.++...|..-...+.+.+.+.
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~-~~~~~~~~~~~nv~g~~~ll~~a~~~ 126 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVN-WVYPYSELRAANVLGTREVLRLAASG 126 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEec-cCCcHHHHhhhhhHHHHHHHHHHhhC
Confidence 233568999999887532 11223445567777777777776664
No 406
>PRK08264 short chain dehydrogenase; Validated
Probab=93.14 E-value=0.34 Score=44.91 Aligned_cols=26 Identities=23% Similarity=0.162 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
..+|.|+||+|.+|.+++..|+..|.
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~G~ 31 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLARGA 31 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCc
Confidence 46899999999999999999998874
No 407
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=93.11 E-value=0.26 Score=48.29 Aligned_cols=95 Identities=19% Similarity=0.267 Sum_probs=61.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccC--CCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFE--DAE 174 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~--dAD 174 (398)
|||.|+|++|++|..|...|. .+. . .+.+ +..+ +||.+.. ...+.++ .-|
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~-~---v~a~-----~~~~-------~Ditd~~-----------~v~~~i~~~~PD 52 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF-E---VIAT-----DRAE-------LDITDPD-----------AVLEVIRETRPD 52 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc-e---EEec-----cCcc-------ccccChH-----------HHHHHHHhhCCC
Confidence 469999999999999988776 221 1 1222 2211 3333322 1122223 458
Q ss_pred EEEEeCCCCC--CCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 175 WALLIGAKPR--GPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 175 iViitag~~r--k~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
+||.++.+.. +...++...+..|+.-...+++..+++ ++++|-+|
T Consensus 53 vVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~---ga~lVhiS 99 (281)
T COG1091 53 VVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV---GARLVHIS 99 (281)
T ss_pred EEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh---CCeEEEee
Confidence 9999887764 333457777889999999999999986 67777666
No 408
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=93.09 E-value=1.3 Score=38.41 Aligned_cols=115 Identities=15% Similarity=0.069 Sum_probs=68.8
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccc--hhhHHHHHHHHhhhcCCCcceEEEe-cC---------
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERS--LQALEGVAMELEDSLFPLLREVKIG-IN--------- 165 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~--~~~l~g~a~DL~d~~~~~~~~v~i~-~~--------- 165 (398)
.+.|+||+|.+|..++..|+..+-. .+.+ . .++ .+.++....++.... .++.+. .|
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~----~v~~--~--~r~~~~~~~~~l~~~l~~~~----~~~~~~~~D~~~~~~~~~ 69 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGAR----VVIL--T--SRSEDSEGAQELIQELKAPG----AKITFIECDLSDPESIRA 69 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTE----EEEE--E--ESSCHHHHHHHHHHHHHHTT----SEEEEEESETTSHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCce----EEEE--e--eecccccccccccccccccc----cccccccccccccccccc
Confidence 5889999999999999999998431 1333 2 444 555665666665222 122211 11
Q ss_pred ----cccccCCCcEEEEeCCCCCC-CCCc--h---hhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 166 ----PYELFEDAEWALLIGAKPRG-PGME--R---AGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 166 ----~~eal~dADiViitag~~rk-~g~~--r---~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
-.+....-|++|.++|.... +..+ . .+.+..|..-...+.+.+... +++.+|+++-...
T Consensus 70 ~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~g~iv~~sS~~~ 138 (167)
T PF00106_consen 70 LIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ--GGGKIVNISSIAG 138 (167)
T ss_dssp HHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH--TTEEEEEEEEGGG
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheec--cccceEEecchhh
Confidence 12345688999999887642 2111 1 134566655555566665552 5888888885544
No 409
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=93.02 E-value=0.18 Score=49.46 Aligned_cols=63 Identities=11% Similarity=0.129 Sum_probs=41.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
|||+||| .|.+|..++..|+..+. .+.+ + |++.. .+ ++.+.. .....+..++.++||+|
T Consensus 1 m~Ig~IG-lG~MG~~ma~~L~~~G~-----~v~v--~--~~~~~-~~----~~~~~g------~~~~~s~~~~~~~advV 59 (292)
T PRK15059 1 MKLGFIG-LGIMGTPMAINLARAGH-----QLHV--T--TIGPV-AD----ELLSLG------AVSVETARQVTEASDII 59 (292)
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCCC-----eEEE--E--eCCHh-HH----HHHHcC------CeecCCHHHHHhcCCEE
Confidence 4899999 69999999999998874 2433 3 44432 22 222111 12234566778999999
Q ss_pred EEeC
Q 015897 177 LLIG 180 (398)
Q Consensus 177 iita 180 (398)
|++.
T Consensus 60 i~~v 63 (292)
T PRK15059 60 FIMV 63 (292)
T ss_pred EEeC
Confidence 9864
No 410
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=93.02 E-value=0.54 Score=46.81 Aligned_cols=26 Identities=19% Similarity=0.229 Sum_probs=23.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
++||+|+||+|.+|..++..|...+.
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~ 27 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSD 27 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCC
Confidence 46999999999999999999888764
No 411
>PRK08177 short chain dehydrogenase; Provisional
Probab=92.99 E-value=0.21 Score=46.26 Aligned_cols=26 Identities=15% Similarity=0.045 Sum_probs=23.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
|++|.|+||+|.+|++++..|+..|.
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~ 26 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGW 26 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCC
Confidence 45799999999999999999998874
No 412
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.93 E-value=0.71 Score=43.83 Aligned_cols=80 Identities=20% Similarity=0.113 Sum_probs=44.9
Q ss_pred CEEEEEcC--CCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec-------Ccc
Q 015897 97 VNIAVSGA--AGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI-------NPY 167 (398)
Q Consensus 97 ~KI~IiGA--~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~-------~~~ 167 (398)
+++.|+|| ++.+|..++..|+..|. .+.+ .+.+.+++.++..+.++......+..++.-.. ...
T Consensus 8 k~~lItGa~~s~GIG~a~a~~la~~G~-----~v~l--~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 8 KRILVTGVITDSSIAFHVARVAQEQGA-----EVVL--TGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred CEEEEeCCCCcchHHHHHHHHHHHCCC-----EEEE--ecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHH
Confidence 57899998 68999999999998875 2433 43333344444444444321100101111000 012
Q ss_pred cccCCCcEEEEeCCCC
Q 015897 168 ELFEDAEWALLIGAKP 183 (398)
Q Consensus 168 eal~dADiViitag~~ 183 (398)
+.+...|++|..+|..
T Consensus 81 ~~~g~iD~li~nAG~~ 96 (256)
T PRK07889 81 EHVDGLDGVVHSIGFA 96 (256)
T ss_pred HHcCCCcEEEEccccc
Confidence 3356789999988764
No 413
>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional
Probab=92.93 E-value=0.9 Score=45.82 Aligned_cols=84 Identities=17% Similarity=0.141 Sum_probs=46.9
Q ss_pred HHHHHHHHHhcCcCCCCCceEEEecccccchhhHHH-HHHHHhhhcCCCcceEEEecCcccccCCCcEEEEeCCCCCCCC
Q 015897 109 ANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEG-VAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPG 187 (398)
Q Consensus 109 G~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g-~a~DL~d~~~~~~~~v~i~~~~~eal~dADiViitag~~rk~g 187 (398)
|..++..|+..|. .|.+ + |++++.++. ....+.+. .+++.+++.+++++||+||++...+
T Consensus 32 G~~MA~~La~aG~-----~V~v--~--Dr~~~~l~~~~~~~l~~~------Gi~~asd~~eaa~~ADvVIlaVP~~---- 92 (342)
T PRK12557 32 GSRMAIEFAEAGH-----DVVL--A--EPNRSILSEELWKKVEDA------GVKVVSDDAEAAKHGEIHILFTPFG---- 92 (342)
T ss_pred HHHHHHHHHhCCC-----eEEE--E--ECCHHHhhHHHHHHHHHC------CCEEeCCHHHHHhCCCEEEEECCCc----
Confidence 7788888888764 3543 3 566554322 11122211 2345567778899999999884311
Q ss_pred CchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 188 MERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 188 ~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
..++++.+.+.....++.+|+..+
T Consensus 93 -----------~~v~~Vl~~L~~~L~~g~IVId~S 116 (342)
T PRK12557 93 -----------KKTVEIAKNILPHLPENAVICNTC 116 (342)
T ss_pred -----------HHHHHHHHHHHhhCCCCCEEEEec
Confidence 123344444544434566666554
No 414
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=92.90 E-value=0.26 Score=48.98 Aligned_cols=91 Identities=11% Similarity=0.134 Sum_probs=54.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
.++|+|+| .|.||..++..|..-|. .+. .+ |+..+... ... .+.-..+..+.+++||+
T Consensus 136 g~tvgIvG-~G~IG~~vA~~l~afG~-----~V~--~~--~~~~~~~~----~~~--------~~~~~~~l~e~l~~aDv 193 (312)
T PRK15469 136 DFTIGILG-AGVLGSKVAQSLQTWGF-----PLR--CW--SRSRKSWP----GVQ--------SFAGREELSAFLSQTRV 193 (312)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCC-----EEE--EE--eCCCCCCC----Cce--------eecccccHHHHHhcCCE
Confidence 36999999 69999999999987654 232 23 43322111 000 01011246788999999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
|+++.... ..|..++. .+.++.. .|++++||++
T Consensus 194 vv~~lPlt-----------~~T~~li~--~~~l~~m-k~ga~lIN~a 226 (312)
T PRK15469 194 LINLLPNT-----------PETVGIIN--QQLLEQL-PDGAYLLNLA 226 (312)
T ss_pred EEECCCCC-----------HHHHHHhH--HHHHhcC-CCCcEEEECC
Confidence 99974321 11223332 3345554 6899999988
No 415
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.90 E-value=1 Score=44.38 Aligned_cols=117 Identities=9% Similarity=0.011 Sum_probs=75.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec---------Cc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI---------NP 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~---------~~ 166 (398)
...|.|+||++.+|..+|+.++..+- .+++ .|+|.+..+..+..+++..-.+.-.+.++. .-
T Consensus 38 g~~vLITGgg~GlGr~ialefa~rg~-----~~vl----~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~V 108 (300)
T KOG1201|consen 38 GEIVLITGGGSGLGRLIALEFAKRGA-----KLVL----WDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKV 108 (300)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHhCC-----eEEE----EeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHH
Confidence 45889999988899999999999875 2444 367777776666666643100000111211 14
Q ss_pred ccccCCCcEEEEeCCC-CCCCCCc--hhh---hHHHH----HHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 YELFEDAEWALLIGAK-PRGPGME--RAG---LLDIN----GQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 ~eal~dADiViitag~-~rk~g~~--r~d---ll~~N----~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.++..+.|++|..||. +-++.++ +.+ .++.| ..+.+...+.+.+. .+|.|+.++-
T Consensus 109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~--~~GHIV~IaS 173 (300)
T KOG1201|consen 109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN--NNGHIVTIAS 173 (300)
T ss_pred HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc--CCceEEEehh
Confidence 5778899999998886 3444432 222 23334 45688899999984 7888877763
No 416
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=92.85 E-value=2 Score=39.74 Aligned_cols=25 Identities=20% Similarity=0.101 Sum_probs=22.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
+++.|+||+|.+|.+++..|+..|.
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~ 27 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY 27 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC
Confidence 4789999999999999999998774
No 417
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=92.81 E-value=0.47 Score=48.96 Aligned_cols=91 Identities=10% Similarity=0.114 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
...+|+|+|+ |.+|..++..+...|. .|.. + |.++.++....++ .+ .+ ....++++++|
T Consensus 194 ~Gk~VvViG~-G~IG~~vA~~ak~~Ga-----~ViV--~--d~dp~r~~~A~~~------G~----~v-~~leeal~~aD 252 (406)
T TIGR00936 194 AGKTVVVAGY-GWCGKGIAMRARGMGA-----RVIV--T--EVDPIRALEAAMD------GF----RV-MTMEEAAKIGD 252 (406)
T ss_pred CcCEEEEECC-CHHHHHHHHHHhhCcC-----EEEE--E--eCChhhHHHHHhc------CC----Ee-CCHHHHHhcCC
Confidence 3569999995 9999999998887664 2433 3 4444443212211 11 11 12356789999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
+||.+.|. ..++..- .+... .+++++++++-.
T Consensus 253 VVItaTG~---------------~~vI~~~--~~~~m-K~GailiN~G~~ 284 (406)
T TIGR00936 253 IFITATGN---------------KDVIRGE--HFENM-KDGAIVANIGHF 284 (406)
T ss_pred EEEECCCC---------------HHHHHHH--HHhcC-CCCcEEEEECCC
Confidence 99887552 2344331 22332 578999999875
No 418
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=92.78 E-value=0.43 Score=49.50 Aligned_cols=93 Identities=13% Similarity=0.109 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
...+|+|+|+ |.+|..++..+...|. .|.+ + |+++.++....++ ++ . + .+..++++++|
T Consensus 211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga-----~ViV--~--d~dp~ra~~A~~~------G~--~--v-~~l~eal~~aD 269 (425)
T PRK05476 211 AGKVVVVAGY-GDVGKGCAQRLRGLGA-----RVIV--T--EVDPICALQAAMD------GF--R--V-MTMEEAAELGD 269 (425)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-----EEEE--E--cCCchhhHHHHhc------CC--E--e-cCHHHHHhCCC
Confidence 3469999995 9999999999988775 2443 3 5555554322221 11 1 1 13467788999
Q ss_pred EEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 175 WALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 175 iViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
+||.+.|. ..++.. ..+... .+++++++++-+-+
T Consensus 270 VVI~aTG~---------------~~vI~~--~~~~~m-K~GailiNvG~~d~ 303 (425)
T PRK05476 270 IFVTATGN---------------KDVITA--EHMEAM-KDGAILANIGHFDN 303 (425)
T ss_pred EEEECCCC---------------HHHHHH--HHHhcC-CCCCEEEEcCCCCC
Confidence 99887553 223332 122332 57899999996643
No 419
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=92.74 E-value=1.5 Score=44.11 Aligned_cols=127 Identities=24% Similarity=0.148 Sum_probs=72.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec---CcccccC
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI---NPYELFE 171 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~---~~~eal~ 171 (398)
+-.+|+|+|+ |.+|...++.....+ +. +.. +|+++++++ .+++|-. +..+.. +..++++
T Consensus 166 pG~~V~I~G~-GGlGh~avQ~Aka~g-a~----Via----~~~~~~K~e-~a~~lGA-------d~~i~~~~~~~~~~~~ 227 (339)
T COG1064 166 PGKWVAVVGA-GGLGHMAVQYAKAMG-AE----VIA----ITRSEEKLE-LAKKLGA-------DHVINSSDSDALEAVK 227 (339)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcC-Ce----EEE----EeCChHHHH-HHHHhCC-------cEEEEcCCchhhHHhH
Confidence 3579999995 888887777666566 22 432 478888876 6665531 222221 2223333
Q ss_pred C-CcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCc-hhHH-H-HHHHHCCCCCCceEE--
Q 015897 172 D-AEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPC-NTNA-L-ICLKNAPSIPAKNFH-- 245 (398)
Q Consensus 172 d-ADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~-d~~t-~-~~~k~~~~~~~kvig-- 245 (398)
+ +|+||.|.+ + .-+....+.+ .++|.++.+++|- ..+. . +..-...+ .++.|
T Consensus 228 ~~~d~ii~tv~-~---------------~~~~~~l~~l----~~~G~~v~vG~~~~~~~~~~~~~~li~~~--~~i~GS~ 285 (339)
T COG1064 228 EIADAIIDTVG-P---------------ATLEPSLKAL----RRGGTLVLVGLPGGGPIPLLPAFLLILKE--ISIVGSL 285 (339)
T ss_pred hhCcEEEECCC-h---------------hhHHHHHHHH----hcCCEEEEECCCCCcccCCCCHHHhhhcC--eEEEEEe
Confidence 3 999999976 3 2233333333 4799999999994 3322 1 11111112 25566
Q ss_pred ecCchhHHHHHHHHHH
Q 015897 246 ALTRLDENRAKCQLAL 261 (398)
Q Consensus 246 ~gt~lDs~Rl~~~lA~ 261 (398)
.|+.-|..-+-.+.++
T Consensus 286 ~g~~~d~~e~l~f~~~ 301 (339)
T COG1064 286 VGTRADLEEALDFAAE 301 (339)
T ss_pred cCCHHHHHHHHHHHHh
Confidence 4566666666555443
No 420
>PRK06153 hypothetical protein; Provisional
Probab=92.74 E-value=0.24 Score=50.53 Aligned_cols=58 Identities=17% Similarity=0.099 Sum_probs=37.2
Q ss_pred CCcceeeEE-eeccchhHhhhh--ccCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccc
Q 015897 72 NDCYGVFCL-TYDLKAEEETKS--WKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSE 136 (398)
Q Consensus 72 ~~~~~~~~~-~~~~~~~~~~~~--~~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D 136 (398)
.+--+||++ .|-......... .-+..||+|||+ |.+|+.++..|+..|+ + .|+|+|-|
T Consensus 149 ~~~~svf~y~dt~s~R~~i~~~q~kL~~~~VaIVG~-GG~GS~Va~~LAR~GV-g-----eI~LVD~D 209 (393)
T PRK06153 149 AEEDSVFNYPDTASSRAGIGALSAKLEGQRIAIIGL-GGTGSYILDLVAKTPV-R-----EIHLFDGD 209 (393)
T ss_pred cccCCceehhhhhccccChHHHHHHHhhCcEEEEcC-CccHHHHHHHHHHcCC-C-----EEEEECCC
Confidence 444689998 332222111111 112469999995 9999999999999997 3 23446655
No 421
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=92.70 E-value=0.38 Score=44.52 Aligned_cols=25 Identities=12% Similarity=0.145 Sum_probs=22.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
..||.|+|+ |.+|+.++..|+..|+
T Consensus 21 ~s~VlIiG~-gglG~evak~La~~GV 45 (197)
T cd01492 21 SARILLIGL-KGLGAEIAKNLVLSGI 45 (197)
T ss_pred hCcEEEEcC-CHHHHHHHHHHHHcCC
Confidence 358999995 8899999999999997
No 422
>PRK06046 alanine dehydrogenase; Validated
Probab=92.67 E-value=0.39 Score=47.94 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
...+|+||| +|..|...+..+....-+. .+.+ + |++.++++..+.++.+.. + .++....+..+++. +|
T Consensus 128 ~~~~vgiiG-~G~qa~~h~~al~~~~~i~---~v~v--~--~r~~~~~~~~~~~~~~~~-~--~~v~~~~~~~~~l~-aD 195 (326)
T PRK06046 128 DSKVVGIIG-AGNQARTQLLALSEVFDLE---EVRV--Y--DRTKSSAEKFVERMSSVV-G--CDVTVAEDIEEACD-CD 195 (326)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhhCCce---EEEE--E--CCCHHHHHHHHHHHHhhc-C--ceEEEeCCHHHHhh-CC
Confidence 457999999 5999999888777533222 2443 3 777788888887775421 2 23445555556665 99
Q ss_pred EEEEeC
Q 015897 175 WALLIG 180 (398)
Q Consensus 175 iViita 180 (398)
+|+++-
T Consensus 196 iVv~aT 201 (326)
T PRK06046 196 ILVTTT 201 (326)
T ss_pred EEEEec
Confidence 998864
No 423
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=92.65 E-value=0.46 Score=46.84 Aligned_cols=67 Identities=18% Similarity=0.016 Sum_probs=43.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
..||.|+|+ |.+|..++..|...|. .|.+ .|++.++.+ .+.++ +. ......+..+.++++|+
T Consensus 152 g~kvlViG~-G~iG~~~a~~L~~~Ga-----~V~v----~~r~~~~~~-~~~~~-----G~--~~~~~~~l~~~l~~aDi 213 (296)
T PRK08306 152 GSNVLVLGF-GRTGMTLARTLKALGA-----NVTV----GARKSAHLA-RITEM-----GL--SPFHLSELAEEVGKIDI 213 (296)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC-----EEEE----EECCHHHHH-HHHHc-----CC--eeecHHHHHHHhCCCCE
Confidence 579999995 9999999999987663 2443 366654432 33221 11 11111234677899999
Q ss_pred EEEeC
Q 015897 176 ALLIG 180 (398)
Q Consensus 176 Viita 180 (398)
||.+.
T Consensus 214 VI~t~ 218 (296)
T PRK08306 214 IFNTI 218 (296)
T ss_pred EEECC
Confidence 99985
No 424
>PRK06720 hypothetical protein; Provisional
Probab=92.65 E-value=1.3 Score=39.91 Aligned_cols=80 Identities=9% Similarity=0.018 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcc--eEEEec--C-----
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR--EVKIGI--N----- 165 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~--~v~i~~--~----- 165 (398)
+.+.+.|+||+|.+|..++..|+..|. .+.+ .|++.+.++..+.++.... .... ...++. +
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-----~V~l----~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~v 84 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-----KVIV----TDIDQESGQATVEEITNLG-GEALFVSYDMEKQGDWQRVI 84 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-----EEEE----EECCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHH
Confidence 346889999988999999999998774 2443 2566666665555554211 1100 111110 0
Q ss_pred --cccccCCCcEEEEeCCCCC
Q 015897 166 --PYELFEDAEWALLIGAKPR 184 (398)
Q Consensus 166 --~~eal~dADiViitag~~r 184 (398)
..+.+...|++|..+|..+
T Consensus 85 ~~~~~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 85 SITLNAFSRIDMLFQNAGLYK 105 (169)
T ss_pred HHHHHHcCCCCEEEECCCcCC
Confidence 1223457899999888654
No 425
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=92.64 E-value=0.17 Score=46.92 Aligned_cols=24 Identities=25% Similarity=0.390 Sum_probs=21.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcC
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGE 120 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~ 120 (398)
|+|.|+||+|.||.+++..|+..+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~ 24 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERY 24 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhC
Confidence 489999999999999999999874
No 426
>PLN02494 adenosylhomocysteinase
Probab=92.61 E-value=0.41 Score=50.19 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=58.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
-.+|+|+|. |.+|..++..+...|. .|.+ +|++..++. .+.+ + .+ .+ ....++++.+|+
T Consensus 254 GKtVvViGy-G~IGr~vA~~aka~Ga-----~VIV----~e~dp~r~~-eA~~--~---G~--~v---v~leEal~~ADV 312 (477)
T PLN02494 254 GKVAVICGY-GDVGKGCAAAMKAAGA-----RVIV----TEIDPICAL-QALM--E---GY--QV---LTLEDVVSEADI 312 (477)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC-----EEEE----EeCCchhhH-HHHh--c---CC--ee---ccHHHHHhhCCE
Confidence 469999995 9999999999876664 2433 355544432 1211 1 11 11 124567899999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHH
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNA 229 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t 229 (398)
||.+.|.. .++. ...+... .++++++|++-+.+.+-
T Consensus 313 VI~tTGt~---------------~vI~--~e~L~~M-K~GAiLiNvGr~~~eID 348 (477)
T PLN02494 313 FVTTTGNK---------------DIIM--VDHMRKM-KNNAIVCNIGHFDNEID 348 (477)
T ss_pred EEECCCCc---------------cchH--HHHHhcC-CCCCEEEEcCCCCCccC
Confidence 99876532 2221 2233443 68999999999744433
No 427
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.54 E-value=0.45 Score=49.14 Aligned_cols=112 Identities=17% Similarity=0.168 Sum_probs=62.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccch-hhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSL-QALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~-~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
.++|.|+|+ |.+|..++..|+..|. .|.+ + |.+. +.++....+|... ...+.......+...++|
T Consensus 5 ~k~v~iiG~-g~~G~~~A~~l~~~G~-----~V~~--~--d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~d 70 (450)
T PRK14106 5 GKKVLVVGA-GVSGLALAKFLKKLGA-----KVIL--T--DEKEEDQLKEALEELGEL----GIELVLGEYPEEFLEGVD 70 (450)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC-----EEEE--E--eCCchHHHHHHHHHHHhc----CCEEEeCCcchhHhhcCC
Confidence 468999996 8899999999999885 3544 3 4442 3333333344211 112222222224567899
Q ss_pred EEEEeCCCCC-CCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch
Q 015897 175 WALLIGAKPR-GPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN 226 (398)
Q Consensus 175 iViitag~~r-k~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d 226 (398)
+||.+.|.+. .| .....-..+++++...+...... + ..+|-+|-.+.
T Consensus 71 ~vv~~~g~~~~~~--~~~~a~~~~i~~~~~~~~~~~~~--~-~~vI~ITGS~G 118 (450)
T PRK14106 71 LVVVSPGVPLDSP--PVVQAHKKGIEVIGEVELAYRFS--K-APIVAITGTNG 118 (450)
T ss_pred EEEECCCCCCCCH--HHHHHHHCCCcEEeHHHHHHhhc--C-CCEEEEeCCCc
Confidence 9999887642 22 11122334566666655544432 3 45666766654
No 428
>PRK08223 hypothetical protein; Validated
Probab=92.42 E-value=0.65 Score=45.68 Aligned_cols=25 Identities=24% Similarity=0.335 Sum_probs=22.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
..||.|+|+ |.+|+.++..|+..|+
T Consensus 27 ~s~VlIvG~-GGLGs~va~~LA~aGV 51 (287)
T PRK08223 27 NSRVAIAGL-GGVGGIHLLTLARLGI 51 (287)
T ss_pred cCCEEEECC-CHHHHHHHHHHHHhCC
Confidence 359999995 9999999999999997
No 429
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=92.41 E-value=1.6 Score=40.46 Aligned_cols=47 Identities=21% Similarity=0.242 Sum_probs=32.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
|.++.|+||+|.+|.+++..|+..|. .+.+. + .++.+.++....++.
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~-----~v~~~-~--~~~~~~~~~~~~~~~ 47 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGY-----TVAVN-Y--QQNLHAAQEVVNLIT 47 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-----EEEEE-e--CCChHHHHHHHHHHH
Confidence 34789999999999999999998774 24331 1 345555554555554
No 430
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=92.41 E-value=0.46 Score=44.88 Aligned_cols=26 Identities=12% Similarity=0.101 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.+++.|+||+|.||..++..|+..|.
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~ 33 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGA 33 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC
Confidence 35789999999999999999999875
No 431
>PLN03139 formate dehydrogenase; Provisional
Probab=92.40 E-value=0.51 Score=48.37 Aligned_cols=93 Identities=14% Similarity=0.175 Sum_probs=54.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
-++|+||| .|.||..++..|..-|. .+. .+ |+.....+ ...+ . .+....+..+.+++||+
T Consensus 199 gktVGIVG-~G~IG~~vA~~L~afG~-----~V~--~~--d~~~~~~~-~~~~---~------g~~~~~~l~ell~~sDv 258 (386)
T PLN03139 199 GKTVGTVG-AGRIGRLLLQRLKPFNC-----NLL--YH--DRLKMDPE-LEKE---T------GAKFEEDLDAMLPKCDV 258 (386)
T ss_pred CCEEEEEe-ecHHHHHHHHHHHHCCC-----EEE--EE--CCCCcchh-hHhh---c------CceecCCHHHHHhhCCE
Confidence 35999999 59999999999986553 232 23 44322111 1111 1 11122356788899999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
|++..... .+ +-.++. .+.+... .|++++||++
T Consensus 259 V~l~lPlt----~~-------T~~li~--~~~l~~m-k~ga~lIN~a 291 (386)
T PLN03139 259 VVINTPLT----EK-------TRGMFN--KERIAKM-KKGVLIVNNA 291 (386)
T ss_pred EEEeCCCC----HH-------HHHHhC--HHHHhhC-CCCeEEEECC
Confidence 99974211 11 112221 2344454 6899999987
No 432
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=92.37 E-value=0.57 Score=47.06 Aligned_cols=25 Identities=28% Similarity=0.454 Sum_probs=21.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
+||+|+||+|.+|..++..|...+.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~ 25 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPY 25 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC
Confidence 5899999999999999998877654
No 433
>PRK06484 short chain dehydrogenase; Validated
Probab=92.34 E-value=0.38 Score=50.48 Aligned_cols=118 Identities=15% Similarity=0.116 Sum_probs=64.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--C-------c
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--N-------P 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~-------~ 166 (398)
.+++.|+||+|.||.+++..|+..|. .|.+ .+++.+.++....++.... ......++. + .
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~ 337 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGD-----RLLI----IDRDAEGAKKLAEALGDEH--LSVQADITDEAAVESAFAQI 337 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHhCCce--eEEEccCCCHHHHHHHHHHH
Confidence 46899999999999999999999874 2443 3667666665554432111 000111111 0 1
Q ss_pred ccccCCCcEEEEeCCCCC--CCC--Cch---hhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 167 YELFEDAEWALLIGAKPR--GPG--MER---AGLLDINGQIFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 167 ~eal~dADiViitag~~r--k~g--~~r---~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
.+.+..-|++|..+|... .+- .+. ...+..|..-...+.+.+-.+-..++.||+++.-
T Consensus 338 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~ 402 (520)
T PRK06484 338 QARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI 402 (520)
T ss_pred HHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence 122345799999888642 221 121 2335555444333343333321245778888754
No 434
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=92.32 E-value=0.41 Score=46.99 Aligned_cols=67 Identities=16% Similarity=0.051 Sum_probs=42.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
..||+|+|+ |.+|..++..|...|. .|.+ .+++.+++.. +.++ .. ..+. ..+..+.++++|+
T Consensus 151 gk~v~IiG~-G~iG~avA~~L~~~G~-----~V~v----~~R~~~~~~~-~~~~-----g~-~~~~-~~~l~~~l~~aDi 212 (287)
T TIGR02853 151 GSNVMVLGF-GRTGMTIARTFSALGA-----RVFV----GARSSADLAR-ITEM-----GL-IPFP-LNKLEEKVAEIDI 212 (287)
T ss_pred CCEEEEEcC-hHHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHH-HHHC-----CC-eeec-HHHHHHHhccCCE
Confidence 369999995 9999999999988764 2443 3666554432 1111 11 0111 1234577899999
Q ss_pred EEEeC
Q 015897 176 ALLIG 180 (398)
Q Consensus 176 Viita 180 (398)
||.+.
T Consensus 213 Vint~ 217 (287)
T TIGR02853 213 VINTI 217 (287)
T ss_pred EEECC
Confidence 99975
No 435
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=92.31 E-value=1.3 Score=41.66 Aligned_cols=115 Identities=13% Similarity=0.026 Sum_probs=73.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec-------Ccccc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI-------NPYEL 169 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~-------~~~ea 169 (398)
-.|.|.|++..||-.+|..+.+-|- +|.+ ..+++++|.......-+.. ....++--.. -..+.
T Consensus 6 nTiLITGG~sGIGl~lak~f~elgN-----~VIi----~gR~e~~L~e~~~~~p~~~-t~v~Dv~d~~~~~~lvewLkk~ 75 (245)
T COG3967 6 NTILITGGASGIGLALAKRFLELGN-----TVII----CGRNEERLAEAKAENPEIH-TEVCDVADRDSRRELVEWLKKE 75 (245)
T ss_pred cEEEEeCCcchhhHHHHHHHHHhCC-----EEEE----ecCcHHHHHHHHhcCcchh-eeeecccchhhHHHHHHHHHhh
Confidence 4899999989999999999987653 3444 3788888875443322211 1111111000 12356
Q ss_pred cCCCcEEEEeCCCCCCCCCc-----h---hhhHHHH----HHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 170 FEDAEWALLIGAKPRGPGME-----R---AGLLDIN----GQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 170 l~dADiViitag~~rk~g~~-----r---~dll~~N----~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
+-+-+++|..+|..|....+ . .+.+..| +.+...+.+.+.+ .|+|-||++|-
T Consensus 76 ~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~--q~~a~IInVSS 139 (245)
T COG3967 76 YPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLR--QPEATIINVSS 139 (245)
T ss_pred CCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHh--CCCceEEEecc
Confidence 67889999999988754332 1 1223333 5667888888888 48999999984
No 436
>COG4007 Predicted dehydrogenase related to H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase [General function prediction only]
Probab=92.31 E-value=1.5 Score=42.44 Aligned_cols=99 Identities=20% Similarity=0.226 Sum_probs=59.6
Q ss_pred CCEEEEEcCCCch--------------------HHHHHHHHHhcCcCCCCCceEEEecccccchhhHHH-HHHHHhhhcC
Q 015897 96 MVNIAVSGAAGMI--------------------ANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEG-VAMELEDSLF 154 (398)
Q Consensus 96 ~~KI~IiGA~G~v--------------------G~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g-~a~DL~d~~~ 154 (398)
++||+|-|| ||- |+++|..++..|. .++| .|.|.+..+- +-..++|+
T Consensus 1 ~mkv~vyga-gnq~ly~~~l~~pek~ggE~PyGGa~mAiefAeAGH-----DVVL----aePn~d~~dd~~w~~vedA-- 68 (340)
T COG4007 1 MMKVAVYGA-GNQRLYLEQLNLPEKYGGEPPYGGARMAIEFAEAGH-----DVVL----AEPNRDIMDDEHWKRVEDA-- 68 (340)
T ss_pred CceEEEEcC-CccchhHHhcCChhhhCCCCCCCchHHHHHHHHcCC-----cEEe----ecCCccccCHHHHHHHHhc--
Confidence 478888885 652 6778888887764 3655 2444333221 12222332
Q ss_pred CCcceEEEecCcccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhH
Q 015897 155 PLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTN 228 (398)
Q Consensus 155 ~~~~~v~i~~~~~eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~ 228 (398)
.+.+++||.++.+.+++.|+.--. -..+..|.++|...+.+ +++ +.|.|..-
T Consensus 69 ----GV~vv~dD~eaa~~~Ei~VLFTPF-----------Gk~T~~Iarei~~hvpE----gAV---icnTCT~s 120 (340)
T COG4007 69 ----GVEVVSDDAEAAEHGEIHVLFTPF-----------GKATFGIAREILEHVPE----GAV---ICNTCTVS 120 (340)
T ss_pred ----CcEEecCchhhhhcceEEEEeccc-----------chhhHHHHHHHHhhCcC----CcE---ecccccCc
Confidence 477889999999999998764211 12346777887766654 333 45666543
No 437
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=92.28 E-value=0.77 Score=45.17 Aligned_cols=75 Identities=16% Similarity=0.180 Sum_probs=48.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEeccccc-----------------chhhHHHHHHHHhhhcCCCcce
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSER-----------------SLQALEGVAMELEDSLFPLLRE 159 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~-----------------~~~~l~g~a~DL~d~~~~~~~~ 159 (398)
.||.|+|+ |.+|..++..|+..|+-. |. |+|-|. ...+++..+..|++.. |. .+
T Consensus 20 s~VLIvG~-gGLG~EiaKnLalaGVg~----it--I~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLN-p~-V~ 90 (286)
T cd01491 20 SNVLISGL-GGLGVEIAKNLILAGVKS----VT--LHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELN-PY-VP 90 (286)
T ss_pred CcEEEEcC-CHHHHHHHHHHHHcCCCe----EE--EEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHC-CC-CE
Confidence 49999995 999999999999999822 43 355432 1234444444455433 32 23
Q ss_pred EEEec--CcccccCCCcEEEEeC
Q 015897 160 VKIGI--NPYELFEDAEWALLIG 180 (398)
Q Consensus 160 v~i~~--~~~eal~dADiViita 180 (398)
+...+ .+.+.+++.|+||.+.
T Consensus 91 V~~~~~~~~~~~l~~fdvVV~~~ 113 (286)
T cd01491 91 VTVSTGPLTTDELLKFQVVVLTD 113 (286)
T ss_pred EEEEeccCCHHHHhcCCEEEEec
Confidence 33332 2567899999998885
No 438
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=92.27 E-value=0.51 Score=43.75 Aligned_cols=65 Identities=18% Similarity=0.207 Sum_probs=41.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCccccc-CCCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELF-EDAE 174 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal-~dAD 174 (398)
.++|+|+| .|++|++++..|...|. .|.+ .|++.++++..+.++. .... +..+.+ .++|
T Consensus 28 gk~v~I~G-~G~vG~~~A~~L~~~G~-----~Vvv----~D~~~~~~~~~~~~~g---------~~~v-~~~~l~~~~~D 87 (200)
T cd01075 28 GKTVAVQG-LGKVGYKLAEHLLEEGA-----KLIV----ADINEEAVARAAELFG---------ATVV-APEEIYSVDAD 87 (200)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCC-----EEEE----EcCCHHHHHHHHHHcC---------CEEE-cchhhccccCC
Confidence 46899999 59999999999998875 2443 4677666654443321 1111 123333 3899
Q ss_pred EEEEeC
Q 015897 175 WALLIG 180 (398)
Q Consensus 175 iViita 180 (398)
+++.++
T Consensus 88 v~vp~A 93 (200)
T cd01075 88 VFAPCA 93 (200)
T ss_pred EEEecc
Confidence 998765
No 439
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=92.25 E-value=2.6 Score=39.60 Aligned_cols=26 Identities=15% Similarity=0.133 Sum_probs=23.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.+.+.|+||+|.||.+++..|+..|.
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G~ 35 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAGC 35 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC
Confidence 35899999999999999999998874
No 440
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.24 E-value=0.77 Score=43.22 Aligned_cols=26 Identities=8% Similarity=-0.018 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.+++.|+||+|.+|.+++..|+..|.
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~ 32 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGA 32 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC
Confidence 46899999999999999999998874
No 441
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=92.21 E-value=1.2 Score=43.21 Aligned_cols=69 Identities=19% Similarity=0.278 Sum_probs=39.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCccccc-CCCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELF-EDAE 174 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal-~dAD 174 (398)
|+||+|||+ |.+|..++..|...+.+ ++...+ +.+...++.. .++.. .+.+++ +.+++ .+.|
T Consensus 1 m~rVgIiG~-G~iG~~~~~~l~~~~~~----~l~~v~-~~~~~~~~~~---~~~~~-------~~~~~~-d~~~l~~~~D 63 (265)
T PRK13303 1 MMKVAMIGF-GAIGAAVLELLEHDPDL----RVDWVI-VPEHSIDAVR---RALGE-------AVRVVS-SVDALPQRPD 63 (265)
T ss_pred CcEEEEECC-CHHHHHHHHHHhhCCCc----eEEEEE-EcCCCHHHHh---hhhcc-------CCeeeC-CHHHhccCCC
Confidence 579999995 99999999888765322 243322 2232222211 11111 123333 34444 5689
Q ss_pred EEEEeCC
Q 015897 175 WALLIGA 181 (398)
Q Consensus 175 iViitag 181 (398)
+|+.+.+
T Consensus 64 vVve~t~ 70 (265)
T PRK13303 64 LVVECAG 70 (265)
T ss_pred EEEECCC
Confidence 9999875
No 442
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.11 E-value=0.34 Score=47.90 Aligned_cols=75 Identities=16% Similarity=0.252 Sum_probs=51.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
-++|+|||.+|.||..++..|+..+. ++.+ + +.. +.+..+..++||+
T Consensus 159 Gk~V~vIG~s~ivG~PmA~~L~~~ga-----tVtv--~--~~~------------------------t~~l~e~~~~ADI 205 (301)
T PRK14194 159 GKHAVVIGRSNIVGKPMAALLLQAHC-----SVTV--V--HSR------------------------STDAKALCRQADI 205 (301)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCC-----EEEE--E--CCC------------------------CCCHHHHHhcCCE
Confidence 56999999756999999999998774 3443 2 221 0145677789999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC-CC
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVG-NP 224 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt-NP 224 (398)
||.+.|.+. ++.... . .|+++||.++ |+
T Consensus 206 VIsavg~~~---------------~v~~~~-----i-k~GaiVIDvgin~ 234 (301)
T PRK14194 206 VVAAVGRPR---------------LIDADW-----L-KPGAVVIDVGINR 234 (301)
T ss_pred EEEecCChh---------------cccHhh-----c-cCCcEEEEecccc
Confidence 999887652 111111 3 6899999888 44
No 443
>PRK06841 short chain dehydrogenase; Provisional
Probab=92.10 E-value=0.68 Score=43.38 Aligned_cols=26 Identities=23% Similarity=0.114 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.++|.|+||+|.+|.+++..|+..|.
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G~ 40 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKGA 40 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC
Confidence 45899999999999999999998875
No 444
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=92.09 E-value=0.5 Score=47.38 Aligned_cols=74 Identities=24% Similarity=0.197 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAE 174 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dAD 174 (398)
....++|||+ |..+..-+..+..---+. +|.+ + +++++..+..+.++.... + .++....+.++++++||
T Consensus 129 da~~laiIGa-G~qA~~ql~a~~~v~~~~---~I~i--~--~r~~~~~e~~a~~l~~~~-~--~~v~a~~s~~~av~~aD 197 (330)
T COG2423 129 DASTLAIIGA-GAQARTQLEALKAVRDIR---EIRV--Y--SRDPEAAEAFAARLRKRG-G--EAVGAADSAEEAVEGAD 197 (330)
T ss_pred CCcEEEEECC-cHHHHHHHHHHHhhCCcc---EEEE--E--cCCHHHHHHHHHHHHhhc-C--ccceeccCHHHHhhcCC
Confidence 4678999995 998888777766533222 3444 4 788899998998887643 2 24555567799999999
Q ss_pred EEEEe
Q 015897 175 WALLI 179 (398)
Q Consensus 175 iViit 179 (398)
+|+.+
T Consensus 198 iIvt~ 202 (330)
T COG2423 198 IVVTA 202 (330)
T ss_pred EEEEe
Confidence 99875
No 445
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=92.07 E-value=0.56 Score=43.43 Aligned_cols=24 Identities=17% Similarity=0.379 Sum_probs=22.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.||.|+|+ |.+|+.++..|+..|+
T Consensus 20 s~VlviG~-gglGsevak~L~~~GV 43 (198)
T cd01485 20 AKVLIIGA-GALGAEIAKNLVLAGI 43 (198)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCC
Confidence 59999995 8899999999999997
No 446
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=92.06 E-value=0.55 Score=44.90 Aligned_cols=25 Identities=24% Similarity=0.211 Sum_probs=22.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
..||.|+|+ |.+|+.++..|+..|+
T Consensus 24 ~~~VlvvG~-GglGs~va~~La~~Gv 48 (240)
T TIGR02355 24 ASRVLIVGL-GGLGCAASQYLAAAGV 48 (240)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCC
Confidence 359999995 9999999999999986
No 447
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=92.05 E-value=3 Score=39.54 Aligned_cols=46 Identities=28% Similarity=0.278 Sum_probs=33.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHh
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELE 150 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~ 150 (398)
..+.|+||+|.+|.+++..|+..|. .|.+ . .+++++.++....++.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~-----~V~~--~-~~~~~~~~~~~~~~l~ 47 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGY-----RVVL--H-YHRSAAAASTLAAELN 47 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCC-----eEEE--E-cCCcHHHHHHHHHHHH
Confidence 3688999999999999999999875 2443 1 1344566766666664
No 448
>PRK06484 short chain dehydrogenase; Validated
Probab=92.01 E-value=0.46 Score=49.85 Aligned_cols=116 Identities=15% Similarity=0.090 Sum_probs=64.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec---------Cc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI---------NP 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~---------~~ 166 (398)
.+.+.|+||++.+|..++..|+..|. .|.+ .+++.+.++....++.... ......++. ..
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~G~-----~V~~----~~r~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~ 73 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARAGD-----QVVV----ADRNVERARERADSLGPDH--HALAMDVSDEAQIREGFEQL 73 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHhCCce--eEEEeccCCHHHHHHHHHHH
Confidence 35788999999999999999998874 2443 3666677665555442111 000111111 01
Q ss_pred ccccCCCcEEEEeCCCC---CCC--CCch---hhhHHHHH----HHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 167 YELFEDAEWALLIGAKP---RGP--GMER---AGLLDING----QIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 167 ~eal~dADiViitag~~---rk~--g~~r---~dll~~N~----~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
.+.+...|++|..+|.. ..+ ..+- ...+..|. .+.+...+.+.+. ..++.||+++.
T Consensus 74 ~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~~iv~isS 141 (520)
T PRK06484 74 HREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQ-GHGAAIVNVAS 141 (520)
T ss_pred HHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCCeEEEECC
Confidence 22335689999988762 111 1111 12344443 3556666666553 33447777763
No 449
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.97 E-value=1.5 Score=42.89 Aligned_cols=76 Identities=13% Similarity=0.013 Sum_probs=46.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccc-hhhHHHHHHHHhhhcCCCcceEEE-ecC--cc----
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERS-LQALEGVAMELEDSLFPLLREVKI-GIN--PY---- 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~-~~~l~g~a~DL~d~~~~~~~~v~i-~~~--~~---- 167 (398)
.+++.|+||+|.+|.+++..|+..|. .+++ . |++ .+.++..+.++.... .++.. ..| +.
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~Ga-----~Vv~--~--~~~~~~~~~~~~~~i~~~g----~~~~~~~~Dv~d~~~~~ 78 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARLGA-----TVVV--N--DVASALDASDVLDEIRAAG----AKAVAVAGDISQRATAD 78 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-----EEEE--e--cCCchhHHHHHHHHHHhcC----CeEEEEeCCCCCHHHHH
Confidence 46899999999999999999998875 2443 2 332 334555555554321 11111 111 11
Q ss_pred c------ccCCCcEEEEeCCCCC
Q 015897 168 E------LFEDAEWALLIGAKPR 184 (398)
Q Consensus 168 e------al~dADiViitag~~r 184 (398)
+ .+...|++|..+|..+
T Consensus 79 ~~~~~~~~~g~iD~li~nAG~~~ 101 (306)
T PRK07792 79 ELVATAVGLGGLDIVVNNAGITR 101 (306)
T ss_pred HHHHHHHHhCCCCEEEECCCCCC
Confidence 1 1346899999988764
No 450
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=91.93 E-value=0.87 Score=44.94 Aligned_cols=114 Identities=18% Similarity=0.104 Sum_probs=60.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEe-cccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCC
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKL-LGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDA 173 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L-~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dA 173 (398)
+-.|++-+|-+.||+.++...-+.-|+ .+.+.. -+.+.+++.+ ..+..+... ....++++.|.++++++|
T Consensus 152 ~g~k~a~vGDgNNv~nSl~~~~a~~G~-----dv~ia~Pk~~~p~~~~~-~~a~~~a~~---~g~~i~~t~d~~eAv~gA 222 (310)
T COG0078 152 KGLKLAYVGDGNNVANSLLLAAAKLGM-----DVRIATPKGYEPDPEVV-EKAKENAKE---SGGKITLTEDPEEAVKGA 222 (310)
T ss_pred cCcEEEEEcCcchHHHHHHHHHHHhCC-----eEEEECCCcCCcCHHHH-HHHHHHHHh---cCCeEEEecCHHHHhCCC
Confidence 457999999866677777666555554 132210 1112222222 244433221 134788999999999999
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHH-HHHHHHHHHhcCCCeEEE
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIF-AEQGKALNAVASRNVKVI 219 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~-~~i~~~i~~~a~p~a~vI 219 (398)
|+|..-.-... |++-...-.++.-.- .++-.++.+.|.++++++
T Consensus 223 DvvyTDvWvSM--Gee~e~~~~~~~~~~~yQVn~~lm~~a~~~~ifm 267 (310)
T COG0078 223 DVVYTDVWVSM--GEEAEAEERRIAFLPPYQVNEELMALAGPDAIFM 267 (310)
T ss_pred CEEEecCcccC--cchhhhHHHHHhhCCCceeCHHHHhhcCCCeEEE
Confidence 99887544332 222211111211111 234445555566666653
No 451
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=91.89 E-value=1.2 Score=40.94 Aligned_cols=117 Identities=17% Similarity=0.120 Sum_probs=59.1
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccc-hhhHHHHHHHHhhhcCCC-cceEEEecC--cccc-----
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERS-LQALEGVAMELEDSLFPL-LREVKIGIN--PYEL----- 169 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~-~~~l~g~a~DL~d~~~~~-~~~v~i~~~--~~ea----- 169 (398)
|.|+||+|.+|..++..|+..|. .+.+ . +++ .+.++....++.+..... .....++.. ..+.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~-----~v~~--~--~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA-----KVII--T--YRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIE 71 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC-----EEEE--E--eCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 46899999999999999998874 2432 2 333 244444555554322000 001111100 0111
Q ss_pred --cCCCcEEEEeCCCCC-CC--CCc---hhhhHHHHHHHHHHHHHHHHHhc--CCCeEEEEECCC
Q 015897 170 --FEDAEWALLIGAKPR-GP--GME---RAGLLDINGQIFAEQGKALNAVA--SRNVKVIVVGNP 224 (398)
Q Consensus 170 --l~dADiViitag~~r-k~--g~~---r~dll~~N~~i~~~i~~~i~~~a--~p~a~vIvvtNP 224 (398)
+...|+||..+|... .+ ..+ -...+..|..-...+.+.+.++. ...+.+++++-.
T Consensus 72 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~ 136 (239)
T TIGR01830 72 EELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV 136 (239)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence 234699999887532 11 111 12345566655444544443321 134566666644
No 452
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=91.86 E-value=0.38 Score=44.82 Aligned_cols=69 Identities=17% Similarity=0.183 Sum_probs=41.5
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEE-Eec----CcccccCCC
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVK-IGI----NPYELFEDA 173 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~-i~~----~~~eal~dA 173 (398)
|+|+||+|++|++++..|+..+. +|.. |. .|.+.+ .+..|++.. . .+. ... ...++|+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-----~V~~-l~-R~~~~~----~~~~l~~~g--~--~vv~~d~~~~~~l~~al~g~ 65 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-----SVRA-LV-RDPSSD----RAQQLQALG--A--EVVEADYDDPESLVAALKGV 65 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-----CEEE-EE-SSSHHH----HHHHHHHTT--T--EEEES-TT-HHHHHHHHTTC
T ss_pred CEEECCccHHHHHHHHHHHhCCC-----CcEE-EE-eccchh----hhhhhhccc--c--eEeecccCCHHHHHHHHcCC
Confidence 78999999999999999999553 3543 22 232222 223333321 1 111 111 234689999
Q ss_pred cEEEEeCCC
Q 015897 174 EWALLIGAK 182 (398)
Q Consensus 174 DiViitag~ 182 (398)
|.|+++-+.
T Consensus 66 d~v~~~~~~ 74 (233)
T PF05368_consen 66 DAVFSVTPP 74 (233)
T ss_dssp SEEEEESSC
T ss_pred ceEEeecCc
Confidence 999987653
No 453
>PLN02858 fructose-bisphosphate aldolase
Probab=91.82 E-value=0.64 Score=55.06 Aligned_cols=68 Identities=18% Similarity=0.184 Sum_probs=47.1
Q ss_pred cCCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCC
Q 015897 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDA 173 (398)
Q Consensus 94 ~~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dA 173 (398)
|.++||+||| .|.+|..++..|+..|. ++.. + |++.++++.. .+.. .....+..+.+++|
T Consensus 322 ~~~~~IGfIG-lG~MG~~mA~~L~~~G~-----~V~v--~--dr~~~~~~~l----~~~G------a~~~~s~~e~~~~a 381 (1378)
T PLN02858 322 KPVKRIGFIG-LGAMGFGMASHLLKSNF-----SVCG--Y--DVYKPTLVRF----ENAG------GLAGNSPAEVAKDV 381 (1378)
T ss_pred cCCCeEEEEC-chHHHHHHHHHHHHCCC-----EEEE--E--eCCHHHHHHH----HHcC------CeecCCHHHHHhcC
Confidence 4458999999 69999999999998875 2433 3 6666665432 2211 11234567888999
Q ss_pred cEEEEeCC
Q 015897 174 EWALLIGA 181 (398)
Q Consensus 174 DiViitag 181 (398)
|+||++..
T Consensus 382 DvVi~~V~ 389 (1378)
T PLN02858 382 DVLVIMVA 389 (1378)
T ss_pred CEEEEecC
Confidence 99999754
No 454
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=91.81 E-value=0.46 Score=43.01 Aligned_cols=93 Identities=19% Similarity=0.208 Sum_probs=53.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
-.+|+|+| .|.||..++..+..-|. .|.. + |+...... ...+.. +. ..+..+.++.||+
T Consensus 36 g~tvgIiG-~G~IG~~vA~~l~~fG~-----~V~~--~--d~~~~~~~----~~~~~~------~~-~~~l~ell~~aDi 94 (178)
T PF02826_consen 36 GKTVGIIG-YGRIGRAVARRLKAFGM-----RVIG--Y--DRSPKPEE----GADEFG------VE-YVSLDELLAQADI 94 (178)
T ss_dssp TSEEEEES-TSHHHHHHHHHHHHTT------EEEE--E--ESSCHHHH----HHHHTT------EE-ESSHHHHHHH-SE
T ss_pred CCEEEEEE-EcCCcCeEeeeeecCCc-----eeEE--e--cccCChhh----hccccc------ce-eeehhhhcchhhh
Confidence 46999999 59999999999987665 2332 3 55433222 111111 11 2356788899999
Q ss_pred EEEeCC-CCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 176 ALLIGA-KPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 176 Viitag-~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
|+++.. .+...++ + |.+ .+++. .+++++||++--
T Consensus 95 v~~~~plt~~T~~l-----i--~~~-------~l~~m-k~ga~lvN~aRG 129 (178)
T PF02826_consen 95 VSLHLPLTPETRGL-----I--NAE-------FLAKM-KPGAVLVNVARG 129 (178)
T ss_dssp EEE-SSSSTTTTTS-----B--SHH-------HHHTS-TTTEEEEESSSG
T ss_pred hhhhhcccccccee-----e--eee-------eeecc-ccceEEEeccch
Confidence 998743 2221121 1 111 23333 689999999855
No 455
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=91.81 E-value=0.55 Score=48.41 Aligned_cols=68 Identities=19% Similarity=0.246 Sum_probs=42.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec-----Cccc-cc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI-----NPYE-LF 170 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~-----~~~e-al 170 (398)
|||.|+|+ |.+|.+++..|...+. ++.+ +|.+.++++....++. .++..+. ...+ .+
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~-----~v~v----id~~~~~~~~~~~~~~-------~~~~~gd~~~~~~l~~~~~ 63 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENN-----DVTV----IDTDEERLRRLQDRLD-------VRTVVGNGSSPDVLREAGA 63 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-----cEEE----EECCHHHHHHHHhhcC-------EEEEEeCCCCHHHHHHcCC
Confidence 58999995 9999999999988764 3443 4777676553322110 0111111 1122 37
Q ss_pred CCCcEEEEeCC
Q 015897 171 EDAEWALLIGA 181 (398)
Q Consensus 171 ~dADiViitag 181 (398)
+++|.||++.+
T Consensus 64 ~~a~~vi~~~~ 74 (453)
T PRK09496 64 EDADLLIAVTD 74 (453)
T ss_pred CcCCEEEEecC
Confidence 89999988753
No 456
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein. Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.
Probab=91.80 E-value=0.84 Score=49.19 Aligned_cols=81 Identities=21% Similarity=0.300 Sum_probs=48.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhH------HHHHHHHhhhcCCCc-ceEEEecCcc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQAL------EGVAMELEDSLFPLL-REVKIGINPY 167 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l------~g~a~DL~d~~~~~~-~~v~i~~~~~ 167 (398)
+..||+|+| .|.+|++++..|+..|+.. |. .+|.|.-...+ ...+.++.... .+. -+.....+..
T Consensus 128 R~akVlVlG-~Gg~~s~lv~sL~~sG~~~----I~--~vd~D~v~SNlnRIgEl~e~A~~~n~~v-~v~~i~~~~~~dl~ 199 (637)
T TIGR03693 128 RNAKILAAG-SGDFLTKLVRSLIDSGFPR----FH--AIVTDAEEHALDRIHELAEIAEETDDAL-LVQEIDFAEDQHLH 199 (637)
T ss_pred hcccEEEEe-cCchHHHHHHHHHhcCCCc----EE--EEeccccchhhhHHHHHHHHHHHhCCCC-ceEeccCCcchhHH
Confidence 457999999 6999999999999999843 42 33344332211 22233311110 000 0111223467
Q ss_pred cccCCCcEEEEeCCCC
Q 015897 168 ELFEDAEWALLIGAKP 183 (398)
Q Consensus 168 eal~dADiViitag~~ 183 (398)
+.+++.|+||..+..+
T Consensus 200 ev~~~~DiVi~vsDdy 215 (637)
T TIGR03693 200 EAFEPADWVLYVSDNG 215 (637)
T ss_pred HhhcCCcEEEEECCCC
Confidence 8999999999987654
No 457
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.80 E-value=3.1 Score=38.85 Aligned_cols=25 Identities=24% Similarity=0.103 Sum_probs=22.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
++|.|+||+|.+|.+++..|+..|.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~ 27 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF 27 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC
Confidence 4688999999999999999998874
No 458
>PLN02928 oxidoreductase family protein
Probab=91.79 E-value=0.38 Score=48.58 Aligned_cols=103 Identities=16% Similarity=0.152 Sum_probs=54.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcC-CCcceEEEecCcccccCCCcE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLF-PLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~-~~~~~v~i~~~~~eal~dADi 175 (398)
++|+|+| .|.||..++..|..-|. .|.. + |++..........+..... .+........+..+.+++||+
T Consensus 160 ktvGIiG-~G~IG~~vA~~l~afG~-----~V~~--~--dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDi 229 (347)
T PLN02928 160 KTVFILG-YGAIGIELAKRLRPFGV-----KLLA--T--RRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADI 229 (347)
T ss_pred CEEEEEC-CCHHHHHHHHHHhhCCC-----EEEE--E--CCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCE
Confidence 6999999 69999999999876654 2432 3 5442211100000000000 000000012356789999999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
|++..... + .|-.++. .+.++.. .|++++||++=
T Consensus 230 Vvl~lPlt--~---------~T~~li~--~~~l~~M-k~ga~lINvaR 263 (347)
T PLN02928 230 VVLCCTLT--K---------ETAGIVN--DEFLSSM-KKGALLVNIAR 263 (347)
T ss_pred EEECCCCC--h---------HhhcccC--HHHHhcC-CCCeEEEECCC
Confidence 99974221 1 1112222 2344444 68999999983
No 459
>PRK08605 D-lactate dehydrogenase; Validated
Probab=91.77 E-value=0.29 Score=49.02 Aligned_cols=63 Identities=21% Similarity=0.113 Sum_probs=39.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
-+||+||| .|.+|..++..|+. + ++. .|. .+ |++.... .... +....+..+.+++||+
T Consensus 146 g~~VgIIG-~G~IG~~vA~~L~~-~-~g~--~V~--~~--d~~~~~~------~~~~-------~~~~~~l~ell~~aDv 203 (332)
T PRK08605 146 DLKVAVIG-TGRIGLAVAKIFAK-G-YGS--DVV--AY--DPFPNAK------AATY-------VDYKDTIEEAVEGADI 203 (332)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHh-c-CCC--EEE--EE--CCCccHh------HHhh-------ccccCCHHHHHHhCCE
Confidence 46999999 59999999999853 2 221 232 23 4443221 0110 1122356788999999
Q ss_pred EEEeC
Q 015897 176 ALLIG 180 (398)
Q Consensus 176 Viita 180 (398)
|+++.
T Consensus 204 Ivl~l 208 (332)
T PRK08605 204 VTLHM 208 (332)
T ss_pred EEEeC
Confidence 99875
No 460
>PRK06523 short chain dehydrogenase; Provisional
Probab=91.73 E-value=0.27 Score=46.35 Aligned_cols=25 Identities=16% Similarity=0.155 Sum_probs=22.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
++|.|+||+|.+|..++..|+..|.
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~ 34 (260)
T PRK06523 10 KRALVTGGTKGIGAATVARLLEAGA 34 (260)
T ss_pred CEEEEECCCCchhHHHHHHHHHCCC
Confidence 6899999999999999999998774
No 461
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=91.58 E-value=2.3 Score=39.38 Aligned_cols=45 Identities=22% Similarity=0.247 Sum_probs=30.2
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhh
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELED 151 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d 151 (398)
|.|+||+|.+|.+++..|+..|. .+.+ .+ ..+.+.++....++.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~-----~v~~--~~-~~~~~~~~~~~~~l~~ 45 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF-----EICV--HY-HSGRSDAESVVSAIQA 45 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC-----EEEE--Ee-CCCHHHHHHHHHHHHH
Confidence 46999999999999999998875 2433 21 2334455555555543
No 462
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=91.54 E-value=0.64 Score=47.34 Aligned_cols=77 Identities=18% Similarity=0.227 Sum_probs=47.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEeccccc-----------------chhhHHHHHHHHhhhcCCCcc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSER-----------------SLQALEGVAMELEDSLFPLLR 158 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~-----------------~~~~l~g~a~DL~d~~~~~~~ 158 (398)
..||.|+|+ |.+|+.++..|+..|+ + .+. |+|-|. ...+++..+..|.+.. +..
T Consensus 135 ~~~VlvvG~-GG~Gs~ia~~La~~Gv-g---~i~--lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~v- 205 (376)
T PRK08762 135 EARVLLIGA-GGLGSPAALYLAAAGV-G---TLG--IVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALN-PDV- 205 (376)
T ss_pred cCcEEEECC-CHHHHHHHHHHHHcCC-C---eEE--EEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHC-CCC-
Confidence 358999995 9999999999999997 2 143 455541 1345555555555443 321
Q ss_pred eEEEecC------cccccCCCcEEEEeCC
Q 015897 159 EVKIGIN------PYELFEDAEWALLIGA 181 (398)
Q Consensus 159 ~v~i~~~------~~eal~dADiViitag 181 (398)
++..... ..+.++++|+||.+..
T Consensus 206 ~v~~~~~~~~~~~~~~~~~~~D~Vv~~~d 234 (376)
T PRK08762 206 QVEAVQERVTSDNVEALLQDVDVVVDGAD 234 (376)
T ss_pred EEEEEeccCChHHHHHHHhCCCEEEECCC
Confidence 2221111 1235789999998754
No 463
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=91.52 E-value=0.16 Score=48.87 Aligned_cols=24 Identities=29% Similarity=0.409 Sum_probs=21.7
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCc
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
||.|+||+|++|++++..|+..+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~ 24 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV 24 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC
Confidence 589999999999999999998764
No 464
>PRK06953 short chain dehydrogenase; Provisional
Probab=91.37 E-value=1.8 Score=39.78 Aligned_cols=26 Identities=19% Similarity=0.239 Sum_probs=22.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
|.++.|+||+|.+|++++..|+..|.
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~ 26 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGW 26 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCC
Confidence 45899999999999999999988764
No 465
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=91.36 E-value=0.48 Score=46.45 Aligned_cols=74 Identities=12% Similarity=0.115 Sum_probs=47.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--CcccccCCC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--NPYELFEDA 173 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~~~eal~dA 173 (398)
.+++.|+|| |..|.++++.|+..+.. .|.+ .+++.++++..+.++.+.. +.. .+.... +..+.+.++
T Consensus 127 ~k~vlilGa-GGaarAi~~aL~~~g~~----~i~i----~nR~~~ka~~La~~~~~~~-~~~-~~~~~~~~~~~~~~~~~ 195 (283)
T PRK14027 127 LDSVVQVGA-GGVGNAVAYALVTHGVQ----KLQV----ADLDTSRAQALADVINNAV-GRE-AVVGVDARGIEDVIAAA 195 (283)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCC----EEEE----EcCCHHHHHHHHHHHhhcc-Ccc-eEEecCHhHHHHHHhhc
Confidence 458999995 99999999999987762 2544 3788888887777664221 110 111111 112345789
Q ss_pred cEEEEeC
Q 015897 174 EWALLIG 180 (398)
Q Consensus 174 DiViita 180 (398)
|+||.+-
T Consensus 196 divINaT 202 (283)
T PRK14027 196 DGVVNAT 202 (283)
T ss_pred CEEEEcC
Confidence 9999864
No 466
>PRK08303 short chain dehydrogenase; Provisional
Probab=91.35 E-value=2.8 Score=41.18 Aligned_cols=25 Identities=20% Similarity=0.161 Sum_probs=22.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
+.+.|+||++.||.+++..|+..|.
T Consensus 9 k~~lITGgs~GIG~aia~~la~~G~ 33 (305)
T PRK08303 9 KVALVAGATRGAGRGIAVELGAAGA 33 (305)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC
Confidence 5788999999999999999998874
No 467
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=91.33 E-value=0.54 Score=49.36 Aligned_cols=90 Identities=14% Similarity=0.126 Sum_probs=55.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
-++|+|+| .|.||..++..+...|. .|.+ + |++..+.....+ + .+ . . .+..++++.||+
T Consensus 254 GKtVgVIG-~G~IGr~vA~rL~a~Ga-----~ViV--~--e~dp~~a~~A~~---~---G~--~--~-~~leell~~ADI 312 (476)
T PTZ00075 254 GKTVVVCG-YGDVGKGCAQALRGFGA-----RVVV--T--EIDPICALQAAM---E---GY--Q--V-VTLEDVVETADI 312 (476)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCC-----EEEE--E--eCCchhHHHHHh---c---Cc--e--e-ccHHHHHhcCCE
Confidence 46999999 59999999999987664 2433 3 444333321111 1 11 1 1 234677899999
Q ss_pred EEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCC
Q 015897 176 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 176 Viitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
||.+.|.+ .++. .+.+... .|+++++|++-.
T Consensus 313 VI~atGt~---------------~iI~--~e~~~~M-KpGAiLINvGr~ 343 (476)
T PTZ00075 313 FVTATGNK---------------DIIT--LEHMRRM-KNNAIVGNIGHF 343 (476)
T ss_pred EEECCCcc---------------cccC--HHHHhcc-CCCcEEEEcCCC
Confidence 99975522 2222 1233443 689999999876
No 468
>PLN02996 fatty acyl-CoA reductase
Probab=91.33 E-value=3 Score=44.08 Aligned_cols=42 Identities=12% Similarity=0.011 Sum_probs=29.3
Q ss_pred cccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHH
Q 015897 168 ELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNA 210 (398)
Q Consensus 168 eal~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~ 210 (398)
+.++++|+||.+|+.-. ......+....|..-...+.+.+.+
T Consensus 108 ~l~~~vD~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~ 149 (491)
T PLN02996 108 EMWKEIDIVVNLAATTN-FDERYDVALGINTLGALNVLNFAKK 149 (491)
T ss_pred HHHhCCCEEEECccccC-CcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 34578999999887543 2233455677888888888877766
No 469
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=91.24 E-value=0.55 Score=38.78 Aligned_cols=91 Identities=18% Similarity=0.230 Sum_probs=50.7
Q ss_pred EEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--C----cccccCC
Q 015897 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--N----PYELFED 172 (398)
Q Consensus 99 I~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~----~~eal~d 172 (398)
|.|+|. |.+|..++..|...+. ++.+ +|.+++..+....+.- .+..+. + ....+.+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~-----~vvv----id~d~~~~~~~~~~~~--------~~i~gd~~~~~~l~~a~i~~ 62 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGI-----DVVV----IDRDPERVEELREEGV--------EVIYGDATDPEVLERAGIEK 62 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTS-----EEEE----EESSHHHHHHHHHTTS--------EEEES-TTSHHHHHHTTGGC
T ss_pred eEEEcC-CHHHHHHHHHHHhCCC-----EEEE----EECCcHHHHHHHhccc--------ccccccchhhhHHhhcCccc
Confidence 679995 9999999999998652 3544 4677666553332211 121111 1 2345678
Q ss_pred CcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 173 AEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 173 ADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
||.||++.+. -..| ..++..+++. .|+..++...+
T Consensus 63 a~~vv~~~~~-----------d~~n----~~~~~~~r~~-~~~~~ii~~~~ 97 (116)
T PF02254_consen 63 ADAVVILTDD-----------DEEN----LLIALLAREL-NPDIRIIARVN 97 (116)
T ss_dssp ESEEEEESSS-----------HHHH----HHHHHHHHHH-TTTSEEEEEES
T ss_pred cCEEEEccCC-----------HHHH----HHHHHHHHHH-CCCCeEEEEEC
Confidence 8888877431 1223 3344445555 46666555443
No 470
>PLN03129 NADP-dependent malic enzyme; Provisional
Probab=91.22 E-value=0.22 Score=53.19 Aligned_cols=133 Identities=13% Similarity=0.108 Sum_probs=81.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHh-----cCcCCCCCceEEEeccccc--ch---hhHHHHHHHHhhhcCCCcceEEEecCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAA-----GEVLGPDQPIALKLLGSER--SL---QALEGVAMELEDSLFPLLREVKIGINP 166 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~-----~~~~~~~~~i~L~L~d~D~--~~---~~l~g~a~DL~d~~~~~~~~v~i~~~~ 166 (398)
.||.|.|| |..|..++..|+. .|+-.++-.-.+.++|.+- .. +.+......+.+. .....+.
T Consensus 322 ~riv~~GA-GsAgigia~ll~~~~~~~~Gls~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~fa~~-------~~~~~~L 393 (581)
T PLN03129 322 QRILFAGA-GEAGTGIAELIALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSLQPFKKPFAHD-------HEPGASL 393 (581)
T ss_pred ceEEEECC-CHHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEcCCCeEeCCCCccChHHHHHHHhh-------cccCCCH
Confidence 69999995 9999999988876 3542221111233444320 01 1122222222221 1123468
Q ss_pred ccccCC--CcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCc---hhHHHHHHHHCCCCCC
Q 015897 167 YELFED--AEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPC---NTNALICLKNAPSIPA 241 (398)
Q Consensus 167 ~eal~d--ADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~---d~~t~~~~k~~~~~~~ 241 (398)
.+++++ +|++|=+.+.+- -+-.++.+.|.++ +++.+|.-.+||. .....-+++.+.+ +
T Consensus 394 ~e~v~~vkptvLIG~S~~~g--------------~Ft~evi~~Ma~~-~~rPIIFaLSNPt~~~E~~pe~a~~~T~G--~ 456 (581)
T PLN03129 394 LEAVKAIKPTVLIGLSGVGG--------------TFTKEVLEAMASL-NERPIIFALSNPTSKAECTAEEAYTWTGG--R 456 (581)
T ss_pred HHHHhccCCCEEEEecCCCC--------------CCCHHHHHHHHhc-CCCCEEEECCCCCCCcCcCHHHHHHhhcC--C
Confidence 899999 899887655431 1345677777887 6999999999996 5666777776633 2
Q ss_pred ceEEecCchhHHH
Q 015897 242 KNFHALTRLDENR 254 (398)
Q Consensus 242 kvig~gt~lDs~R 254 (398)
-+|.+|+-.+...
T Consensus 457 ai~AtGSPf~pv~ 469 (581)
T PLN03129 457 AIFASGSPFDPVE 469 (581)
T ss_pred EEEEeCCCCCCee
Confidence 4788887666544
No 471
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=91.13 E-value=0.45 Score=47.73 Aligned_cols=27 Identities=30% Similarity=0.385 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.|+||+|+||+|..|..|...|...+-
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ 27 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPD 27 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCC
Confidence 378999999999999999999988764
No 472
>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein.
Probab=91.07 E-value=3.5 Score=39.67 Aligned_cols=28 Identities=21% Similarity=0.275 Sum_probs=23.9
Q ss_pred hccCCCEEEEEcCCCchHHHHHHHHHhcC
Q 015897 92 SWKKMVNIAVSGAAGMIANHLLFKLAAGE 120 (398)
Q Consensus 92 ~~~~~~KI~IiGA~G~vG~~la~~L~~~~ 120 (398)
+..+..||.|||+ |.+|+.++..|+..|
T Consensus 7 ~~~~~~~V~vvG~-GGlGs~v~~~Lar~G 34 (244)
T TIGR03736 7 LLSRPVSVVLVGA-GGTGSQVIAGLARLH 34 (244)
T ss_pred HHhCCCeEEEEcC-ChHHHHHHHHHHHcc
Confidence 3356789999995 999999999999875
No 473
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=91.05 E-value=1.2 Score=43.17 Aligned_cols=130 Identities=15% Similarity=0.081 Sum_probs=75.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhc----CcCCCC--CceEEEecccc----cchhhHHHHHHHHhhhcCCCcceEEEecCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAG----EVLGPD--QPIALKLLGSE----RSLQALEGVAMELEDSLFPLLREVKIGINP 166 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~----~~~~~~--~~i~L~L~d~D----~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~ 166 (398)
.||.|+|| |..|..++..|+.. |+-.++ +.+.| +|.+ .+.+.+......+.+...+. ....+.
T Consensus 26 ~riv~~GA-GsAg~gia~ll~~~~~~~G~~~~eA~~~i~l--vD~~Gll~~~r~~l~~~~~~~a~~~~~~----~~~~~L 98 (255)
T PF03949_consen 26 QRIVFFGA-GSAGIGIARLLVAAMVREGLSEEEARKRIWL--VDSKGLLTDDREDLNPHKKPFARKTNPE----KDWGSL 98 (255)
T ss_dssp -EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEE--EETTEEEBTTTSSHSHHHHHHHBSSSTT----T--SSH
T ss_pred cEEEEeCC-ChhHHHHHHHHHHHHHHhcCCHHHHhccEEE--EeccceEeccCccCChhhhhhhccCccc----ccccCH
Confidence 59999995 99999999988877 762110 23443 4332 01122333333333322111 111467
Q ss_pred ccccCCC--cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch---hHHHHHHHHCCCCCC
Q 015897 167 YELFEDA--EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN---TNALICLKNAPSIPA 241 (398)
Q Consensus 167 ~eal~dA--DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d---~~t~~~~k~~~~~~~ 241 (398)
.|+++++ |++|=+.+.+. -+-+++.+.|.++ +++.+|.=.+||.. ...+-+++.+.+
T Consensus 99 ~eav~~~kPtvLIG~S~~~g--------------~ft~evv~~Ma~~-~erPIIF~LSNPt~~aE~~peda~~~t~g--- 160 (255)
T PF03949_consen 99 LEAVKGAKPTVLIGLSGQGG--------------AFTEEVVRAMAKH-NERPIIFPLSNPTPKAECTPEDAYEWTDG--- 160 (255)
T ss_dssp HHHHHCH--SEEEECSSSTT--------------SS-HHHHHHCHHH-SSSEEEEE-SSSCGGSSS-HHHHHHTTTS---
T ss_pred HHHHHhcCCCEEEEecCCCC--------------cCCHHHHHHHhcc-CCCCEEEECCCCCCcccCCHHHHHhhCCc---
Confidence 8999999 99988766442 2456778888888 69999999999976 344556665532
Q ss_pred ce-EEecCchh
Q 015897 242 KN-FHALTRLD 251 (398)
Q Consensus 242 kv-ig~gt~lD 251 (398)
+. |.+|+-.+
T Consensus 161 ~ai~AtGSpf~ 171 (255)
T PF03949_consen 161 RAIFATGSPFP 171 (255)
T ss_dssp EEEEEESS---
T ss_pred eEEEecCCccC
Confidence 44 57766533
No 474
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=90.94 E-value=0.59 Score=47.29 Aligned_cols=77 Identities=22% Similarity=0.234 Sum_probs=48.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEeccccc-----------------chhhHHHHHHHHhhhcCCCcc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSER-----------------SLQALEGVAMELEDSLFPLLR 158 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~-----------------~~~~l~g~a~DL~d~~~~~~~ 158 (398)
..||.|+|+ |.+|+.++..|+..|+-. +. |+|-|. ...+++..+..|.+.. |..
T Consensus 28 ~~~VlivG~-GGlGs~~a~~La~~Gvg~----i~--lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n-p~v- 98 (355)
T PRK05597 28 DAKVAVIGA-GGLGSPALLYLAGAGVGH----IT--IIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALN-PDV- 98 (355)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCe----EE--EEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHC-CCc-
Confidence 359999995 999999999999998722 33 355443 1234555555555443 321
Q ss_pred eEEEe-----c-CcccccCCCcEEEEeCC
Q 015897 159 EVKIG-----I-NPYELFEDAEWALLIGA 181 (398)
Q Consensus 159 ~v~i~-----~-~~~eal~dADiViitag 181 (398)
++... . +..+.++++|+||.+..
T Consensus 99 ~v~~~~~~i~~~~~~~~~~~~DvVvd~~d 127 (355)
T PRK05597 99 KVTVSVRRLTWSNALDELRDADVILDGSD 127 (355)
T ss_pred EEEEEEeecCHHHHHHHHhCCCEEEECCC
Confidence 22211 1 12356899999998854
No 475
>PRK07791 short chain dehydrogenase; Provisional
Probab=90.88 E-value=4.3 Score=39.20 Aligned_cols=26 Identities=27% Similarity=0.257 Sum_probs=23.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.+++.|+||++.||..++..|+..|.
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G~ 31 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEGA 31 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC
Confidence 35889999999999999999998774
No 476
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=90.77 E-value=2.4 Score=40.24 Aligned_cols=103 Identities=11% Similarity=0.002 Sum_probs=59.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEe--cCcccccCCC
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIG--INPYELFEDA 173 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~--~~~~eal~dA 173 (398)
.++|.|||| |.|+..=+..|+..+- .|.+ +-.+.+++ ++ ++... + .++.. .-..+++.++
T Consensus 25 ~~~VLVVGG-G~VA~RK~~~Ll~~gA-----~VtV--Vap~i~~e-l~----~l~~~--~---~i~~~~r~~~~~dl~g~ 86 (223)
T PRK05562 25 KIKVLIIGG-GKAAFIKGKTFLKKGC-----YVYI--LSKKFSKE-FL----DLKKY--G---NLKLIKGNYDKEFIKDK 86 (223)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-----EEEE--EcCCCCHH-HH----HHHhC--C---CEEEEeCCCChHHhCCC
Confidence 468999995 9999998888888663 2443 22233333 22 22211 1 22222 2245678999
Q ss_pred cEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCC--chhHHHHHHH
Q 015897 174 EWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNP--CNTNALICLK 234 (398)
Q Consensus 174 DiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP--~d~~t~~~~k 234 (398)
++||.+.+.+ .+=..++...++ .+.++.++.+| ||.+.+.+.+
T Consensus 87 ~LViaATdD~---------------~vN~~I~~~a~~---~~~lvn~vd~p~~~dFi~PAiv~ 131 (223)
T PRK05562 87 HLIVIATDDE---------------KLNNKIRKHCDR---LYKLYIDCSDYKKGLCIIPYQRS 131 (223)
T ss_pred cEEEECCCCH---------------HHHHHHHHHHHH---cCCeEEEcCCcccCeEEeeeEEe
Confidence 9988875432 233334433333 36778888888 6655555443
No 477
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=90.75 E-value=0.89 Score=46.85 Aligned_cols=30 Identities=23% Similarity=0.286 Sum_probs=26.9
Q ss_pred hccCCCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 92 SWKKMVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 92 ~~~~~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
-++++.+|.|+||+|.+|.-+...|+.+|.
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf 104 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRGF 104 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCCC
Confidence 346688999999999999999999999984
No 478
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=90.66 E-value=0.35 Score=46.71 Aligned_cols=134 Identities=10% Similarity=0.050 Sum_probs=80.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcC----CCC--CceEEEeccccc--chhh--HHHHHHHHhhhcCCCcceEEEecCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVL----GPD--QPIALKLLGSER--SLQA--LEGVAMELEDSLFPLLREVKIGINP 166 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~----~~~--~~i~L~L~d~D~--~~~~--l~g~a~DL~d~~~~~~~~v~i~~~~ 166 (398)
.||.|.|| |..|..++..|+..+.- .++ +.+. ++|.+- ..++ +...-..+.+.. ++-....+.
T Consensus 26 ~riv~~GA-GsAg~gia~ll~~~~~~~Gls~e~A~~~i~--~vD~~Gll~~~r~~l~~~~~~~~~~~----~~~~~~~~L 98 (254)
T cd00762 26 HKVLFNGA-GAAALGIANLIVXLXVKEGISKEEACKRIW--XVDRKGLLVKNRKETCPNEYHLARFA----NPERESGDL 98 (254)
T ss_pred cEEEEECc-CHHHHHHHHHHHHHHHhcCCCHHHHhccEE--EECCCCeEeCCCCccCHHHHHHHHHc----CcccccCCH
Confidence 69999995 99999999888765431 111 1233 344320 0111 111112211111 111123568
Q ss_pred ccccC--CCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCch---hHHHHHHHHCCCCCC
Q 015897 167 YELFE--DAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCN---TNALICLKNAPSIPA 241 (398)
Q Consensus 167 ~eal~--dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d---~~t~~~~k~~~~~~~ 241 (398)
.++++ ++|++|=+.+.+. -+-+++.+.|.++ +++.+|.-.+||.. ...+-+++.+.+ +
T Consensus 99 ~eav~~~kptvlIG~S~~~g--------------~ft~evv~~Ma~~-~~~PIIFaLSNPt~~aE~tpe~a~~~t~G--~ 161 (254)
T cd00762 99 EDAVEAAKPDFLIGVSRVGG--------------AFTPEVIRAXAEI-NERPVIFALSNPTSKAECTAEEAYTATEG--R 161 (254)
T ss_pred HHHHHhhCCCEEEEeCCCCC--------------CCCHHHHHHHhhc-CCCCEEEECCCcCCccccCHHHHHhhcCC--C
Confidence 89999 9999887665441 2345677778887 69999999999974 556667766532 3
Q ss_pred ceEEecCchhHHH
Q 015897 242 KNFHALTRLDENR 254 (398)
Q Consensus 242 kvig~gt~lDs~R 254 (398)
.+|.+|+....+.
T Consensus 162 ai~AtGspf~pv~ 174 (254)
T cd00762 162 AIFASGSPFHPVE 174 (254)
T ss_pred EEEEECCCCCCcc
Confidence 5788887755554
No 479
>PRK06123 short chain dehydrogenase; Provisional
Probab=90.48 E-value=4.4 Score=37.56 Aligned_cols=24 Identities=17% Similarity=0.124 Sum_probs=21.8
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCc
Q 015897 98 NIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 98 KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.+.|+||+|.+|.+++..|+..|.
T Consensus 4 ~~lVtG~~~~iG~~~a~~l~~~G~ 27 (248)
T PRK06123 4 VMIITGASRGIGAATALLAAERGY 27 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC
Confidence 689999999999999999998764
No 480
>PLN00015 protochlorophyllide reductase
Probab=90.39 E-value=4.1 Score=39.82 Aligned_cols=115 Identities=12% Similarity=-0.004 Sum_probs=62.1
Q ss_pred EEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ceEEEec--C-------ccccc
Q 015897 101 VSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-REVKIGI--N-------PYELF 170 (398)
Q Consensus 101 IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~v~i~~--~-------~~eal 170 (398)
|+||++.+|..++..|+..|.. .|.+ .+++++.++..+.++........ ....++. . ..+.+
T Consensus 2 ITGas~GIG~aia~~l~~~G~~----~V~~----~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 73 (308)
T PLN00015 2 ITGASSGLGLATAKALAETGKW----HVVM----ACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSG 73 (308)
T ss_pred EeCCCChHHHHHHHHHHHCCCC----EEEE----EeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcC
Confidence 8999999999999999988721 2443 35666766655555532110000 0111111 0 01123
Q ss_pred CCCcEEEEeCCCCCC----CCCchh---hhHHHH----HHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 171 EDAEWALLIGAKPRG----PGMERA---GLLDIN----GQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 171 ~dADiViitag~~rk----~g~~r~---dll~~N----~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
..-|++|..+|.... +..+.. ..+..| .-+.+.+.+.+.+.....+.||+++-
T Consensus 74 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS 137 (308)
T PLN00015 74 RPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGS 137 (308)
T ss_pred CCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEec
Confidence 467999998886321 122322 234444 34566777777663101467777654
No 481
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=90.38 E-value=0.6 Score=43.36 Aligned_cols=76 Identities=8% Similarity=0.037 Sum_probs=43.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
-++|+|||-+.-||..++..|+..+- .+.+ .|++-......+ ..+.|...+. .....+..+.++.||+
T Consensus 62 GK~vvVIGrS~iVGkPla~lL~~~~A-----tVti--~~~~~~~~~~~~--~~~~hs~t~~---~~~~~~l~~~~~~ADI 129 (197)
T cd01079 62 GKTITIINRSEVVGRPLAALLANDGA-----RVYS--VDINGIQVFTRG--ESIRHEKHHV---TDEEAMTLDCLSQSDV 129 (197)
T ss_pred CCEEEEECCCccchHHHHHHHHHCCC-----EEEE--EecCcccccccc--cccccccccc---cchhhHHHHHhhhCCE
Confidence 46999999888899999999988763 3543 222211111110 0112211100 0000114577899999
Q ss_pred EEEeCCCC
Q 015897 176 ALLIGAKP 183 (398)
Q Consensus 176 Viitag~~ 183 (398)
||.+.|.|
T Consensus 130 VIsAvG~~ 137 (197)
T cd01079 130 VITGVPSP 137 (197)
T ss_pred EEEccCCC
Confidence 99998876
No 482
>PRK07578 short chain dehydrogenase; Provisional
Probab=90.31 E-value=1 Score=40.75 Aligned_cols=23 Identities=30% Similarity=0.481 Sum_probs=21.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAG 119 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~ 119 (398)
|++.|+||+|.+|..++..|+..
T Consensus 1 ~~vlItGas~giG~~la~~l~~~ 23 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR 23 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc
Confidence 47999999999999999999876
No 483
>PRK06398 aldose dehydrogenase; Validated
Probab=90.15 E-value=0.94 Score=42.94 Aligned_cols=25 Identities=16% Similarity=0.159 Sum_probs=22.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
+++.|+||+|.+|.+++..|+..|.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~ 31 (258)
T PRK06398 7 KVAIVTGGSQGIGKAVVNRLKEEGS 31 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC
Confidence 5899999999999999999998874
No 484
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=90.07 E-value=0.71 Score=44.93 Aligned_cols=103 Identities=22% Similarity=0.270 Sum_probs=59.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcEE
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWA 176 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADiV 176 (398)
..++|+||+|.||+.++..|+.+.- .+.| +. ++.++.....+.+... +..+.+ +.+.+|+- -++|++
T Consensus 168 atvaivGa~G~Ia~~Iar~la~~~~-----~~~l--l~--r~aea~~rq~l~~l~e--~~~~~~-i~s~d~~~-~~e~i~ 234 (351)
T COG5322 168 ATVAIVGATGDIASAIARWLAPKVG-----VKEL--LL--RDAEARNRQRLTLLQE--ELGRGK-IMSLDYAL-PQEDIL 234 (351)
T ss_pred CeEEEecCCchHHHHHHHHhccccC-----EEEE--ec--ccHHhhhhhhhhhccc--ccCCCe-eeeccccc-cccceE
Confidence 5899999999999999999987642 2444 22 3334444344433322 222333 33344554 456666
Q ss_pred EEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHH
Q 015897 177 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALI 231 (398)
Q Consensus 177 iitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~ 231 (398)
|..+..|. |..|.-+. + .|.+||+-.+-|-|+-+++
T Consensus 235 v~vAs~~~------------g~~I~pq~------l-kpg~~ivD~g~P~dvd~~v 270 (351)
T COG5322 235 VWVASMPK------------GVEIFPQH------L-KPGCLIVDGGYPKDVDTSV 270 (351)
T ss_pred EEEeecCC------------Cceechhh------c-cCCeEEEcCCcCccccccc
Confidence 66555442 12222222 1 5888888888888776654
No 485
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=90.07 E-value=3.7 Score=40.89 Aligned_cols=115 Identities=12% Similarity=-0.005 Sum_probs=72.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEE-e-----------
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKI-G----------- 163 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i-~----------- 163 (398)
...+.|+||++.||...+..|+..|. .|++. .+|.++.+..+.+|.... +. .++.+ .
T Consensus 35 ~~~~vVTGansGIG~eta~~La~~Ga-----~Vv~~----~R~~~~~~~~~~~i~~~~-~~-~~i~~~~lDLssl~SV~~ 103 (314)
T KOG1208|consen 35 GKVALVTGATSGIGFETARELALRGA-----HVVLA----CRNEERGEEAKEQIQKGK-AN-QKIRVIQLDLSSLKSVRK 103 (314)
T ss_pred CcEEEEECCCCchHHHHHHHHHhCCC-----EEEEE----eCCHHHHHHHHHHHHhcC-CC-CceEEEECCCCCHHHHHH
Confidence 35788999999999999999999984 25553 577788888888888622 11 11111 1
Q ss_pred --cCcccccCCCcEEEEeCCCCCCCCCchhh---h-HHHH----HHHHHHHHHHHHHhcCCCeEEEEECC
Q 015897 164 --INPYELFEDAEWALLIGAKPRGPGMERAG---L-LDIN----GQIFAEQGKALNAVASRNVKVIVVGN 223 (398)
Q Consensus 164 --~~~~eal~dADiViitag~~rk~g~~r~d---l-l~~N----~~i~~~i~~~i~~~a~p~a~vIvvtN 223 (398)
..-......-|+.|..||+-..|.....| + +..| .-+...+.+.++.. .| +.||++|-
T Consensus 104 fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-~~-~RIV~vsS 171 (314)
T KOG1208|consen 104 FAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-AP-SRIVNVSS 171 (314)
T ss_pred HHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-CC-CCEEEEcC
Confidence 11234567889999998875433321111 1 2223 23566666777774 35 78777774
No 486
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=90.01 E-value=2.8 Score=39.00 Aligned_cols=26 Identities=19% Similarity=0.169 Sum_probs=23.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.+++.|+||+|.+|+.++..|+..|.
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~~G~ 33 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVEAGA 33 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC
Confidence 46899999999999999999998775
No 487
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=89.99 E-value=0.53 Score=39.01 Aligned_cols=68 Identities=16% Similarity=0.251 Sum_probs=43.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhc-CcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccC--CC
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAG-EVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFE--DA 173 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~-~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~--dA 173 (398)
+||+|||+ |.+|......+... +-+ .++ .++ |.+.++++..+.... +..+++..+.+. +.
T Consensus 1 i~v~iiG~-G~~g~~~~~~~~~~~~~~----~v~-~v~--d~~~~~~~~~~~~~~---------~~~~~~~~~ll~~~~~ 63 (120)
T PF01408_consen 1 IRVGIIGA-GSIGRRHLRALLRSSPDF----EVV-AVC--DPDPERAEAFAEKYG---------IPVYTDLEELLADEDV 63 (120)
T ss_dssp EEEEEEST-SHHHHHHHHHHHHTTTTE----EEE-EEE--CSSHHHHHHHHHHTT---------SEEESSHHHHHHHTTE
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCc----EEE-EEE--eCCHHHHHHHHHHhc---------ccchhHHHHHHHhhcC
Confidence 48999995 99999998877766 221 232 233 667677665543321 124556666666 79
Q ss_pred cEEEEeCC
Q 015897 174 EWALLIGA 181 (398)
Q Consensus 174 DiViitag 181 (398)
|+|+++..
T Consensus 64 D~V~I~tp 71 (120)
T PF01408_consen 64 DAVIIATP 71 (120)
T ss_dssp SEEEEESS
T ss_pred CEEEEecC
Confidence 99999753
No 488
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=89.97 E-value=1.5 Score=43.53 Aligned_cols=25 Identities=16% Similarity=0.272 Sum_probs=22.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
.||+|+||+|.+|.-++..|...+-
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~ 26 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDD 26 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCC
Confidence 4899999999999999999988764
No 489
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.88 E-value=1.6 Score=45.16 Aligned_cols=117 Identities=19% Similarity=0.108 Sum_probs=61.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecC---------c
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGIN---------P 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~---------~ 166 (398)
..++.|+||+|.+|..++..|+..|. .+.+ ++.+.+.+.++....++.... ....++.. .
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga-----~vi~--~~~~~~~~~l~~~~~~~~~~~----~~~Dv~~~~~~~~~~~~~ 278 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGA-----HVVC--LDVPAAGEALAAVANRVGGTA----LALDITAPDAPARIAEHL 278 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-----EEEE--EeCCccHHHHHHHHHHcCCeE----EEEeCCCHHHHHHHHHHH
Confidence 35899999999999999999998874 2332 333223344443333322100 01112110 0
Q ss_pred ccccCCCcEEEEeCCCCCCC---CCch---hhhHHHHHHHHHHHHHHHHH--hcCCCeEEEEECC
Q 015897 167 YELFEDAEWALLIGAKPRGP---GMER---AGLLDINGQIFAEQGKALNA--VASRNVKVIVVGN 223 (398)
Q Consensus 167 ~eal~dADiViitag~~rk~---g~~r---~dll~~N~~i~~~i~~~i~~--~a~p~a~vIvvtN 223 (398)
.+.+...|+||.++|..+.. .++. ...+..|..-...+.+.+.. ...+++.+|+++-
T Consensus 279 ~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS 343 (450)
T PRK08261 279 AERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS 343 (450)
T ss_pred HHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence 11233689999998865321 1221 22355565544555554443 1134577777773
No 490
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=89.87 E-value=1.9 Score=45.89 Aligned_cols=105 Identities=12% Similarity=0.118 Sum_probs=59.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCc-ce--------EEEecC
Q 015897 95 KMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLL-RE--------VKIGIN 165 (398)
Q Consensus 95 ~~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~-~~--------v~i~~~ 165 (398)
...||.|+|| |.+|...+..+...|- .|.. .|+++++++ .+.++........ .+ .+..++
T Consensus 164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA-----~V~a----~D~~~~rle-~aeslGA~~v~i~~~e~~~~~~gya~~~s~ 232 (509)
T PRK09424 164 PPAKVLVIGA-GVAGLAAIGAAGSLGA-----IVRA----FDTRPEVAE-QVESMGAEFLELDFEEEGGSGDGYAKVMSE 232 (509)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC-----EEEE----EeCCHHHHH-HHHHcCCeEEEeccccccccccchhhhcch
Confidence 4679999995 9999999888877664 1332 377777766 5554431100000 00 000011
Q ss_pred c---------ccccCCCcEEEEeCCCCCCCCCchhhhHHHHHHHH-HHHHHHHHHhcCCCeEEEEECCC
Q 015897 166 P---------YELFEDAEWALLIGAKPRGPGMERAGLLDINGQIF-AEQGKALNAVASRNVKVIVVGNP 224 (398)
Q Consensus 166 ~---------~eal~dADiViitag~~rk~g~~r~dll~~N~~i~-~~i~~~i~~~a~p~a~vIvvtNP 224 (398)
+ .+.++++|+||.+++.|.++- -..+ ++.. +.. .|++.|+.++-+
T Consensus 233 ~~~~~~~~~~~~~~~gaDVVIetag~pg~~a----------P~lit~~~v---~~m-kpGgvIVdvg~~ 287 (509)
T PRK09424 233 EFIKAEMALFAEQAKEVDIIITTALIPGKPA----------PKLITAEMV---ASM-KPGSVIVDLAAE 287 (509)
T ss_pred hHHHHHHHHHHhccCCCCEEEECCCCCcccC----------cchHHHHHH---Hhc-CCCCEEEEEccC
Confidence 1 122368999999999763210 1122 3333 222 588888888865
No 491
>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=89.80 E-value=0.98 Score=44.93 Aligned_cols=82 Identities=15% Similarity=0.208 Sum_probs=49.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHH--------HhhhcCC-CcceEEEecCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAME--------LEDSLFP-LLREVKIGINP 166 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~D--------L~d~~~~-~~~~v~i~~~~ 166 (398)
|+||+-||| |.||....-.++..-- .|.+.++ |.+..+..+.--| |.+.... ...+.-+.+|-
T Consensus 1 ~~kicciga-gyvggptcavia~kcp-----~i~vtvv--d~s~~ri~~wnsd~lpiyepgldevv~~crgknlffstdi 72 (481)
T KOG2666|consen 1 MVKICCIGA-GYVGGPTCAVIALKCP-----DIEVTVV--DISVPRINAWNSDKLPIYEPGLDEVVKQCRGKNLFFSTDI 72 (481)
T ss_pred CceEEEecC-cccCCcchheeeecCC-----ceEEEEE--ecCchHhhcccCCCCcccCCCHHHHHHHhcCCceeeecch
Confidence 579999995 9999886555544321 2555454 5665554322111 0110000 11245567888
Q ss_pred ccccCCCcEEEEeCCCCCC
Q 015897 167 YELFEDAEWALLIGAKPRG 185 (398)
Q Consensus 167 ~eal~dADiViitag~~rk 185 (398)
+.+++.||+|++....|.|
T Consensus 73 ekai~eadlvfisvntptk 91 (481)
T KOG2666|consen 73 EKAIKEADLVFISVNTPTK 91 (481)
T ss_pred HHHhhhcceEEEEecCCcc
Confidence 9999999999998776643
No 492
>PRK13535 erythrose 4-phosphate dehydrogenase; Provisional
Probab=89.79 E-value=0.89 Score=45.75 Aligned_cols=25 Identities=24% Similarity=0.389 Sum_probs=21.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
++||+|.|+ |.||..+...|..++.
T Consensus 1 ~~~IaInGf-GrIGR~~lr~l~e~~~ 25 (336)
T PRK13535 1 TIRVAINGF-GRIGRNVLRALYESGR 25 (336)
T ss_pred CeEEEEECc-CHHHHHHHHHHHhcCC
Confidence 469999996 9999999999887653
No 493
>KOG4777 consensus Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=89.79 E-value=0.24 Score=47.73 Aligned_cols=79 Identities=19% Similarity=0.211 Sum_probs=44.6
Q ss_pred CEEE-EEcCCCchHHHHHHHHHhcCcCCCCCceEEEeccc-ccchhhHHHHHHHHhhhc-CCCc-ceEEEecCcccccCC
Q 015897 97 VNIA-VSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGS-ERSLQALEGVAMELEDSL-FPLL-REVKIGINPYELFED 172 (398)
Q Consensus 97 ~KI~-IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~-D~~~~~l~g~a~DL~d~~-~~~~-~~v~i~~~~~eal~d 172 (398)
.|++ |+||+|.||+-+...|...+.|+ |.+ ++- .++..+--+.+..-.+.. .|.. .+.++..-+.+.|..
T Consensus 4 kk~a~vlGaTGaVGQrFi~lLsdhP~f~----ikv--LgAS~RSAGK~ya~a~~wkqt~~lp~~~~e~~V~ec~~~~F~e 77 (361)
T KOG4777|consen 4 KKSAPVLGATGAVGQRFISLLSDHPYFS----IKV--LGASKRSAGKRYAFAGNWKQTDLLPESAHEYTVEECTADSFNE 77 (361)
T ss_pred ccccceeeccchhHHHHHHHhccCCcce----eee--ecccccccCCceEecccchhcccccchhhhhhHhhcChhhccc
Confidence 4677 99999999999999888777654 332 221 122111111111111111 0111 234444567889999
Q ss_pred CcEEEEeCC
Q 015897 173 AEWALLIGA 181 (398)
Q Consensus 173 ADiViitag 181 (398)
||||+...+
T Consensus 78 cDIvfsgld 86 (361)
T KOG4777|consen 78 CDIVFSGLD 86 (361)
T ss_pred ccEEEecCC
Confidence 999998654
No 494
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.77 E-value=3.6 Score=39.37 Aligned_cols=25 Identities=24% Similarity=0.222 Sum_probs=21.4
Q ss_pred CEEEEEcCCC--chHHHHHHHHHhcCc
Q 015897 97 VNIAVSGAAG--MIANHLLFKLAAGEV 121 (398)
Q Consensus 97 ~KI~IiGA~G--~vG~~la~~L~~~~~ 121 (398)
+.+.|+||++ .||..++..|+..|.
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~ 33 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGA 33 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCC
Confidence 5788999864 799999999998875
No 495
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.68 E-value=1.2 Score=42.86 Aligned_cols=26 Identities=15% Similarity=-0.066 Sum_probs=22.1
Q ss_pred CCEEEEEcCC--CchHHHHHHHHHhcCc
Q 015897 96 MVNIAVSGAA--GMIANHLLFKLAAGEV 121 (398)
Q Consensus 96 ~~KI~IiGA~--G~vG~~la~~L~~~~~ 121 (398)
.+.+.|+||+ +.||..++..|+..|.
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G~ 32 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQGA 32 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCCC
Confidence 3588999985 5899999999999875
No 496
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=89.62 E-value=0.69 Score=47.34 Aligned_cols=60 Identities=17% Similarity=0.129 Sum_probs=38.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEecCcccccCCCcE
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEW 175 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~~~~eal~dADi 175 (398)
-++|+||| .|+||+.++..+..-|. .+. .+ |...... ... .. ..+..+.+++||+
T Consensus 116 gktvGIIG-~G~IG~~va~~l~a~G~-----~V~--~~--Dp~~~~~-------~~~-------~~-~~~l~ell~~aDi 170 (381)
T PRK00257 116 ERTYGVVG-AGHVGGRLVRVLRGLGW-----KVL--VC--DPPRQEA-------EGD-------GD-FVSLERILEECDV 170 (381)
T ss_pred cCEEEEEC-CCHHHHHHHHHHHHCCC-----EEE--EE--CCccccc-------ccC-------cc-ccCHHHHHhhCCE
Confidence 36999999 59999999999987664 232 34 4321110 000 01 1245677899999
Q ss_pred EEEeC
Q 015897 176 ALLIG 180 (398)
Q Consensus 176 Viita 180 (398)
|++..
T Consensus 171 V~lh~ 175 (381)
T PRK00257 171 ISLHT 175 (381)
T ss_pred EEEeC
Confidence 98864
No 497
>PRK06483 dihydromonapterin reductase; Provisional
Probab=89.61 E-value=1.8 Score=40.01 Aligned_cols=25 Identities=28% Similarity=0.308 Sum_probs=22.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEV 121 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~ 121 (398)
+++.|+||+|.+|.+++..|+..|.
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~ 27 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQ 27 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCC
Confidence 4789999999999999999998774
No 498
>PRK07041 short chain dehydrogenase; Provisional
Probab=89.57 E-value=3.9 Score=37.55 Aligned_cols=110 Identities=17% Similarity=0.141 Sum_probs=57.1
Q ss_pred EEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCC-cceEEEec--Ccc---cccCCCc
Q 015897 101 VSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL-LREVKIGI--NPY---ELFEDAE 174 (398)
Q Consensus 101 IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~-~~~v~i~~--~~~---eal~dAD 174 (398)
|+||+|.+|..++..|+..|. .+.+ .+++.+.++....+++... .. .....++. +-. +.+...|
T Consensus 2 ItGas~~iG~~~a~~l~~~G~-----~v~~----~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~id 71 (230)
T PRK07041 2 VVGGSSGIGLALARAFAAEGA-----RVTI----ASRSRDRLAAAARALGGGA-PVRTAALDITDEAAVDAFFAEAGPFD 71 (230)
T ss_pred eecCCChHHHHHHHHHHHCCC-----EEEE----EeCCHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHhcCCCC
Confidence 899999999999999999875 2433 3566666665555553111 00 00111110 011 1233479
Q ss_pred EEEEeCCCCCC-CC--Cc---hhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Q 015897 175 WALLIGAKPRG-PG--ME---RAGLLDINGQIFAEQGKALNAVASRNVKVIVVG 222 (398)
Q Consensus 175 iViitag~~rk-~g--~~---r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvt 222 (398)
++|..+|.... +- .+ -.+.+..|..-...+.+.. .. ...+.+|+++
T Consensus 72 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-~~-~~~g~iv~~s 123 (230)
T PRK07041 72 HVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAA-RI-APGGSLTFVS 123 (230)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhh-hh-cCCeEEEEEC
Confidence 99998775321 11 11 1233455554444444422 22 2456666655
No 499
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=89.54 E-value=6.6 Score=42.78 Aligned_cols=136 Identities=11% Similarity=0.020 Sum_probs=76.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccchhhHHHHHHHHhhhcCCCcceEEEec--C----ccccc
Q 015897 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGI--N----PYELF 170 (398)
Q Consensus 97 ~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~~~~l~g~a~DL~d~~~~~~~~v~i~~--~----~~eal 170 (398)
.+|.|+|. |.+|+.++..|...++ ++.+ +|.|+++.+... + .. .++..+. + ....+
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~-----~vvv----ID~d~~~v~~~~-~---~g----~~v~~GDat~~~~L~~agi 462 (621)
T PRK03562 401 PRVIIAGF-GRFGQIVGRLLLSSGV-----KMTV----LDHDPDHIETLR-K---FG----MKVFYGDATRMDLLESAGA 462 (621)
T ss_pred CcEEEEec-ChHHHHHHHHHHhCCC-----CEEE----EECCHHHHHHHH-h---cC----CeEEEEeCCCHHHHHhcCC
Confidence 58999995 9999999999988775 3443 477777665332 2 11 1222222 1 22567
Q ss_pred CCCcEEEEeCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCeEEEEECCCchhHHHHHHHHCCCCCCceEEecCch
Q 015897 171 EDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPAKNFHALTRL 250 (398)
Q Consensus 171 ~dADiViitag~~rk~g~~r~dll~~N~~i~~~i~~~i~~~a~p~a~vIvvtNP~d~~t~~~~k~~~~~~~kvig~gt~l 250 (398)
.+||.+|++-+.+ +.|.. ++..+++. .|+..++.-++--. ..+.+ +.. +.+ .+---+.-
T Consensus 463 ~~A~~vvv~~~d~-----------~~n~~----i~~~ar~~-~p~~~iiaRa~d~~-~~~~L-~~~-Gad--~v~~e~~e 521 (621)
T PRK03562 463 AKAEVLINAIDDP-----------QTSLQ----LVELVKEH-FPHLQIIARARDVD-HYIRL-RQA-GVE--KPERETFE 521 (621)
T ss_pred CcCCEEEEEeCCH-----------HHHHH----HHHHHHHh-CCCCeEEEEECCHH-HHHHH-HHC-CCC--EEehhhHh
Confidence 7999998875432 33433 44445555 58877665443321 22222 333 332 22222222
Q ss_pred hHHHHHHHHHHHcCcCcCcee
Q 015897 251 DENRAKCQLALKAGVFYDKVS 271 (398)
Q Consensus 251 Ds~Rl~~~lA~~lgv~~~~V~ 271 (398)
.+.++-..+-+.+|+++++++
T Consensus 522 ~sl~l~~~~L~~lg~~~~~~~ 542 (621)
T PRK03562 522 GALKSGRLVLESLGLGPYEAR 542 (621)
T ss_pred HHHHHHHHHHHHcCCCHHHHH
Confidence 345677777777887776654
No 500
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=89.53 E-value=2.1 Score=42.14 Aligned_cols=73 Identities=15% Similarity=0.065 Sum_probs=45.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCcCCCCCceEEEecccccc---hhhHHHHHHHHhhhcCCCcceEEEec-Cc----c
Q 015897 96 MVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERS---LQALEGVAMELEDSLFPLLREVKIGI-NP----Y 167 (398)
Q Consensus 96 ~~KI~IiGA~G~vG~~la~~L~~~~~~~~~~~i~L~L~d~D~~---~~~l~g~a~DL~d~~~~~~~~v~i~~-~~----~ 167 (398)
.+++.|+|| |..+.++++.|+..+.. .|.+ + +++ .++++..+.++.+.. . ..+.+.. ++ .
T Consensus 124 ~k~vlvlGa-GGaarAi~~~l~~~g~~----~i~i--~--nRt~~~~~ka~~la~~~~~~~-~--~~~~~~~~~~~~~l~ 191 (288)
T PRK12749 124 GKTMVLLGA-GGASTAIGAQGAIEGLK----EIKL--F--NRRDEFFDKALAFAQRVNENT-D--CVVTVTDLADQQAFA 191 (288)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCC----EEEE--E--eCCccHHHHHHHHHHHhhhcc-C--ceEEEechhhhhhhh
Confidence 358999995 88899999999887762 2544 3 566 346776766654321 1 1122221 11 2
Q ss_pred cccCCCcEEEEeC
Q 015897 168 ELFEDAEWALLIG 180 (398)
Q Consensus 168 eal~dADiViita 180 (398)
+++.++|+||.+-
T Consensus 192 ~~~~~aDivINaT 204 (288)
T PRK12749 192 EALASADILTNGT 204 (288)
T ss_pred hhcccCCEEEECC
Confidence 3567899999864
Done!