RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 015897
(398 letters)
>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum
vulgare), chloroplast [TaxId: 4558]}
Length = 175
Score = 210 bits (536), Expect = 6e-68
Identities = 154/175 (88%), Positives = 167/175 (95%)
Query: 73 DCYGVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKL 132
DC+GVFC TYDLKAE++TKSWKK+VNIAVSGAAGMI+NHLLFKLA+GEV G DQPIALKL
Sbjct: 1 DCFGVFCTTYDLKAEDKTKSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKL 60
Query: 133 LGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAG 192
LGSERS QALEGVAMELEDSL+PLLREV IGI+PYE+FED +WALLIGAKPRGPGMERA
Sbjct: 61 LGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAA 120
Query: 193 LLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPAKNFHAL 247
LLDINGQIFA+QGKALNAVAS+NVKV+VVGNPCNTNALICLKNAP IPAKNFHAL
Sbjct: 121 LLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHAL 175
>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 154
Score = 145 bits (367), Expect = 5e-43
Identities = 87/153 (56%), Positives = 113/153 (73%)
Query: 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSL 153
K V +AV+GAAG I LLF++AAGE+LG DQP+ L+LL ++++ALEGV MELED
Sbjct: 2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA 61
Query: 154 FPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVAS 213
FPLL ++ +P F+DA++ALL+GA PR GMER LL +NG+IF EQG+AL VA
Sbjct: 62 FPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAK 121
Query: 214 RNVKVIVVGNPCNTNALICLKNAPSIPAKNFHA 246
++VKV+VVGNP NTNALI KNAP + +NF A
Sbjct: 122 KDVKVLVVGNPANTNALIAYKNAPGLNPRNFTA 154
>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 154
Score = 141 bits (356), Expect = 2e-41
Identities = 73/151 (48%), Positives = 94/151 (62%)
Query: 97 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPL 156
+ + V+GAAG IA LL+ + G V G DQPI L LL + L+GV MEL+D PL
Sbjct: 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL 63
Query: 157 LREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNV 216
L++V F+D + A+L+G+ PR GMER LL N +IF QG AL+ A ++V
Sbjct: 64 LKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSV 123
Query: 217 KVIVVGNPCNTNALICLKNAPSIPAKNFHAL 247
KVIVVGNP NTN L K+APSIP +NF L
Sbjct: 124 KVIVVGNPANTNCLTASKSAPSIPKENFSCL 154
>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum
(Sorghum vulgare), chloroplast [TaxId: 4558]}
Length = 188
Score = 137 bits (347), Expect = 1e-39
Identities = 118/135 (87%), Positives = 126/135 (93%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL 307
TRLDENRAKCQLALKAGVFYDKVSN+TIWGNHSTTQVPDFLNA+I+G PVKE+IK KWL
Sbjct: 1 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTKWL 60
Query: 308 EEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYG 367
EE FT T+QKRGG LI+KWGRSSAASTAVSI DA+KSLVTPTPEGDWFS+GVYT GNPYG
Sbjct: 61 EEEFTITVQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYG 120
Query: 368 IAEDIVFSMPCRSKK 382
IAEDIVFSMPCRSK
Sbjct: 121 IAEDIVFSMPCRSKG 135
>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 179
Score = 117 bits (294), Expect = 4e-32
Identities = 61/139 (43%), Positives = 86/139 (61%), Gaps = 4/139 (2%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPV----KEIIKD 303
TRLD NRAK Q+ALK GV D V N+ IWGNHS+TQ PD +A++ E +KD
Sbjct: 1 TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKD 60
Query: 304 HKWLEEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNG 363
WL+ F T+Q+RG +IK SSA S A +I D ++ + TPEG++ S G+ ++G
Sbjct: 61 DSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDG 120
Query: 364 NPYGIAEDIVFSMPCRSKK 382
N YG+ +D+++S P K
Sbjct: 121 NSYGVPDDLLYSFPVTIKD 139
>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 173
Score = 109 bits (273), Expect = 3e-29
Identities = 59/133 (44%), Positives = 81/133 (60%), Gaps = 2/133 (1%)
Query: 247 LTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKW 306
+TRLD NRAK QLA K G D++ MT+WGNHS+T PD +A ++G P E++ W
Sbjct: 1 MTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDME-W 59
Query: 307 LEEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPY 366
E+ F T+ +RG +I+ G SSAAS A + ++ ++ TPEGDW S V + G Y
Sbjct: 60 YEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQG-EY 118
Query: 367 GIAEDIVFSMPCR 379
GI E IV+S P
Sbjct: 119 GIPEGIVYSFPVT 131
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli
[TaxId: 562]}
Length = 145
Score = 88.1 bits (218), Expect = 1e-21
Identities = 37/156 (23%), Positives = 58/156 (37%), Gaps = 16/156 (10%)
Query: 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR 158
+AV GAAG I L L G + L L GVA++L +
Sbjct: 3 VAVLGAAGGIGQALALLLKTQLPSGSE----LSLYDIA---PVTPGVAVDLSHIPTAVKI 55
Query: 159 EVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKV 218
+ G + E A+ L+ R PGM+R+ L ++N I + + A +
Sbjct: 56 KGFSGEDATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQV-AKTCPKACI 114
Query: 219 IVVGNPCNTNALICLKNAPSIPAKNFHALTRLDENR 254
++ NP NT I A+ D+N+
Sbjct: 115 GIITNPVNTTVAIA--------AEVLKKAGVYDKNK 142
>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum
arcticum [TaxId: 87645]}
Length = 171
Score = 84.5 bits (208), Expect = 4e-20
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 249 RLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLE 308
RLD NRA Q+A K G + + +WGNHS T D+ A+I+G VK++I D W
Sbjct: 2 RLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDAWNR 61
Query: 309 EGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGI 368
+ F T+ KRG +I G SSAAS A + +D + V T YGI
Sbjct: 62 DTFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTAGKWTTMGIPSD--GSYGI 119
Query: 369 AEDIVFSMPCRSKK 382
E ++F P ++
Sbjct: 120 PEGVIFGFPVTTEN 133
>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish
(Squalus acanthias) [TaxId: 7797]}
Length = 169
Score = 80.3 bits (197), Expect = 1e-18
Identities = 15/135 (11%), Positives = 35/135 (25%), Gaps = 3/135 (2%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL 307
LD R + + + GV + G H + + + + + + +K
Sbjct: 3 CNLDSARFRYLMGERLGVHSCSCHGW-VIGEHGDSVPSVWSGMNVASIKLHPLDGTNKDK 61
Query: 308 EEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYG 367
++ + + V + YG
Sbjct: 62 QDWKKLHKDVVDSAYEVIKLKGYTSWAIGLSVADLAE-TIMKNLCRVHPVSTMVKD-FYG 119
Query: 368 IAEDIVFSMPCRSKK 382
I +++ S+PC
Sbjct: 120 IKDNVFLSLPCVLND 134
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 144
Score = 78.5 bits (193), Expect = 3e-18
Identities = 34/157 (21%), Positives = 56/157 (35%), Gaps = 19/157 (12%)
Query: 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR 158
+AV GA+G I L L ++ L L + GVA +L
Sbjct: 3 VAVLGASGGIGQPLSLLLKNSPLVS-----RLTLYD----IAHTPGVAADLSHIETRATV 53
Query: 159 EVKIGI-NPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVK 217
+ +G + + + ++ PR PGM R L + N I A A A +
Sbjct: 54 KGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAAC-AQHCPDAM 112
Query: 218 VIVVGNPCNTNALICLKNAPSIPAKNFHALTRLDENR 254
+ ++ NP N+ I A+ F + N+
Sbjct: 113 ICIISNPVNSTIPIT--------AEVFKKHGVYNPNK 141
>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 169
Score = 77.8 bits (191), Expect = 1e-17
Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 8/132 (6%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL 307
T LD RA +A G+ +VS I G+ T +P ++ +
Sbjct: 2 TTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLST---- 57
Query: 308 EEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYG 367
T IQ+ G ++K + +A+ +++ A +
Sbjct: 58 ---LTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQE 114
Query: 368 IAEDIVFSMPCR 379
+ FS P
Sbjct: 115 T-DCPYFSTPLL 125
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 145
Score = 75.6 bits (185), Expect = 3e-17
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 10/139 (7%)
Query: 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR 158
+ + GA+G + + LA + L L+G E S+ LEG+ ++ D+L
Sbjct: 3 VTIIGASGRVGSATALLLAKEPFMKD-----LVLIGREHSINKLEGLREDIYDALAGTRS 57
Query: 159 EVKI---GINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRN 215
+ I + ++++ ++ PR GM R L N +I + K + + +
Sbjct: 58 DANIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--D 115
Query: 216 VKVIVVGNPCNTNALICLK 234
K+ V+ NP + L
Sbjct: 116 TKIFVITNPVDVMTYKALV 134
>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 172
Score = 76.1 bits (186), Expect = 5e-17
Identities = 21/137 (15%), Positives = 44/137 (32%), Gaps = 4/137 (2%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKD--HK 305
LD R + + K GV + G H + VP + + G+ +K +
Sbjct: 3 CNLDSARFRYLIGEKLGVNPTSCHGW-VLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTD 61
Query: 306 WLEEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNP 365
++ + ++ + S A+ + + G
Sbjct: 62 KNKQHWKNVHKQVVEGGYEVLDMKGYTSWAIGLSVTDLARSILKNLKRVHPVTTLVKG-F 120
Query: 366 YGIAEDIVFSMPCRSKK 382
+GI E++ S+PC +
Sbjct: 121 HGIKEEVFLSIPCVLGE 137
>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 74.4 bits (182), Expect = 2e-16
Identities = 24/135 (17%), Positives = 39/135 (28%), Gaps = 9/135 (6%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL 307
T LD R+ +A G +V I G+ T +P +E+
Sbjct: 2 TTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVAD----- 56
Query: 308 EEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYG 367
T+ IQ G +++ +A+ ++ A L G
Sbjct: 57 ---LTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDG 113
Query: 368 IAEDIVFSMPCRSKK 382
FS P K
Sbjct: 114 Q-YARFFSQPLLLGK 127
>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 163
Score = 74.3 bits (182), Expect = 2e-16
Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 6/130 (4%)
Query: 250 LDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEE 309
LD R + +A++ GV ++ + G H VP + G+P+ +++ +
Sbjct: 4 LDAARFRSFIAMELGVSMQDINAC-VLGGHGDAMVPVVKYTTVAGIPISDLLPAETI--D 60
Query: 310 GFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIA 369
E + G +++ + S A A + V G YGI
Sbjct: 61 KLVERTRNGGAEIVEHLKQGS-AFYAPASSVVEMVESIVLDRKRVLPCAVGLEGQ-YGI- 117
Query: 370 EDIVFSMPCR 379
+ +P +
Sbjct: 118 DKTFVGVPVK 127
>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase
{Bifidobacterium longum, strain am101-2 [TaxId: 216816]}
Length = 170
Score = 74.1 bits (181), Expect = 2e-16
Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 10/140 (7%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHK-- 305
T LD R + +A + GV V I G H ++VP + +A I G+P+ +
Sbjct: 1 TNLDSARLRFLIAQQTGVNVKNVHAY-IAGEHGDSEVPLWESATIGGVPMSDWTPLPGHD 59
Query: 306 ---WLEEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTN 362
+ K I ++ + +S VD +++++ V +
Sbjct: 60 PLDADKREEIHQEVKNAAYKIINGKGATNYAIGMSGVDIIEAVLH----DTNRILPVSSM 115
Query: 363 GNPYGIAEDIVFSMPCRSKK 382
+ DI S+P +
Sbjct: 116 LKDFHGISDICMSVPTLLNR 135
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 142
Score = 72.0 bits (176), Expect = 6e-16
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR 158
I V GA G + F+LA + +A +L+ + +G A+++ +S L
Sbjct: 3 ITVIGA-GNVGATTAFRLAE-------KQLARELVLLDVVEGIPQGKALDMYESGPVGLF 54
Query: 159 EVKI-GINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVK 217
+ K+ G N Y +++ ++ PR PGM R LL N I E + S+N
Sbjct: 55 DTKVTGSNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNI-MKHSKNPI 113
Query: 218 VIVVGNPCNTNALICLKNA 236
+IVV NP + + +
Sbjct: 114 IIVVSNPLDIMTHVAWVRS 132
>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 172
Score = 71.8 bits (175), Expect = 2e-15
Identities = 23/137 (16%), Positives = 43/137 (31%), Gaps = 4/137 (2%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL 307
LD R + +A K G+ I G H + V + + G+ ++E+ +
Sbjct: 3 CNLDSARFRYLMAEKLGIHPSSCHGW-ILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTD 61
Query: 308 E--EGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNP 365
E + E + + + A+ + A G
Sbjct: 62 NDSENWKEVHKMVVESAYEVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKG-M 120
Query: 366 YGIAEDIVFSMPCRSKK 382
YGI ++ S+PC
Sbjct: 121 YGIENEVFLSLPCILNA 137
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 142
Score = 70.8 bits (173), Expect = 2e-15
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 7/136 (5%)
Query: 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR 158
++V GAAG + + +A ++ + + G A + +
Sbjct: 3 VSVVGAAGTVGAAAGYNIALRDIAD-----EVVFVDIPDKEDDTVGQAADTNHGI-AYDS 56
Query: 159 EVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKV 218
++ YE ++ ++ PR PG R L N I + +L+ +
Sbjct: 57 NTRVRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHND-DYIS 115
Query: 219 IVVGNPCNTNALICLK 234
+ NP + +
Sbjct: 116 LTTSNPVDLLNRHLYE 131
>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 164
Score = 68.2 bits (166), Expect = 2e-14
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 250 LDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEE 309
LD R + +A++AGV V M + G H VP + I+G+PV E I + +
Sbjct: 4 LDAARYRTFIAMEAGVSVKDVQAM-LMGGHGDEMVPLPRFSTISGIPVSEFIAPDRLAQ- 61
Query: 310 GFTETIQKRGGLLIK-KWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGI 368
E +K GG ++ S+ + A + +++++ + Y G YG+
Sbjct: 62 -IVERTRKGGGEIVNLLKTGSAYYAPAAATAQMVEAVL--KDKKRVMPVAAYLTGQ-YGL 117
Query: 369 AEDIVFSMPCR 379
DI F +P
Sbjct: 118 -NDIYFGVPVI 127
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria
parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 165
Score = 66.8 bits (162), Expect = 7e-14
Identities = 20/133 (15%), Positives = 37/133 (27%), Gaps = 3/133 (2%)
Query: 250 LDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEE 309
LD +R K ++ K V V+ I G H V + G+P++E I + +
Sbjct: 3 LDTSRLKYYISQKLNVCPRDVNAH-IVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDA 61
Query: 310 GFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYGIA 369
+ ++ ++ A + + G
Sbjct: 62 ELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEG--QYGH 119
Query: 370 EDIVFSMPCRSKK 382
DI P
Sbjct: 120 SDIFGGTPVVLGA 132
>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 171
Score = 66.0 bits (160), Expect = 2e-13
Identities = 26/135 (19%), Positives = 42/135 (31%), Gaps = 3/135 (2%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL 307
T LD +R + L + V V I G H ++ + A I PV+++ K+
Sbjct: 1 TSLDSSRLRVALGKQFNVDPRSVDAY-IMGEHGDSEFAAYSTATIGTRPVRDVAKEQGVS 59
Query: 308 EEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYG 367
++ + A + S E G Y +G YG
Sbjct: 60 DDDLAKLEDGVRNKAYDIINLKGATFYGIGTALMRISKAILRDENAVLPVGAYMDG-QYG 118
Query: 368 IAEDIVFSMPCRSKK 382
+ DI P
Sbjct: 119 L-NDIYIGTPAIIGG 132
>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 168
Score = 65.6 bits (159), Expect = 2e-13
Identities = 31/135 (22%), Positives = 53/135 (39%), Gaps = 5/135 (3%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL 307
T LD R K +A GV D+V I G H + VP I G+P+++ + +
Sbjct: 3 THLDSLRFKVAIAKFFGVHIDEVRTR-IIGEHGDSMVPLLSATSIGGIPIQKFERFKELP 61
Query: 308 EEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYG 367
+ E ++ +G +I+ G S A + E + Y +G G
Sbjct: 62 IDEIIEDVKTKGEQIIRLKGGSEFGPAAAILNVVRC---IVNNEKRLLTLSAYVDGEFDG 118
Query: 368 IAEDIVFSMPCRSKK 382
I D+ +P + +
Sbjct: 119 I-RDVCIGVPVKIGR 132
>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 172
Score = 65.7 bits (159), Expect = 2e-13
Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 8/138 (5%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL 307
T LD R + +A G V + G H ++VP + A I G+P++ + + +
Sbjct: 2 TVLDTARLRTLIAQHCGFSPRSVHVY-VIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKC 60
Query: 308 EEGFTETI---QKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGN 364
+ E KR I + ++ + A+++ D ++S+ E + VY
Sbjct: 61 DSKILENFAEKTKRAAYEIIERKGATHYAIALAVADIVESIF--FDEKRVLTLSVYLED- 117
Query: 365 PYGIAEDIVFSMPCRSKK 382
Y +D+ S+P K
Sbjct: 118 -YLGVKDLCISVPVTLGK 134
>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 168
Score = 65.3 bits (158), Expect = 3e-13
Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 2/135 (1%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL 307
T LD R + L V V I G H T++P + A I +P++++++
Sbjct: 1 TILDTARFRFLLGEYFSVAPQNVHAY-IIGEHGDTELPVWSQAYIGVMPIRKLVESKGEE 59
Query: 308 EEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYG 367
+ E I + +T I + + + V +
Sbjct: 60 AQKDLERIFVNVRDAAYQI-IEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLY 118
Query: 368 IAEDIVFSMPCRSKK 382
D+ +P +
Sbjct: 119 GERDVYIGVPAVINR 133
>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 169
Score = 65.2 bits (158), Expect = 3e-13
Identities = 38/139 (27%), Positives = 55/139 (39%), Gaps = 9/139 (6%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHK-- 305
T LD R + L+ K GV V I G H +Q+P + I G + E I D K
Sbjct: 1 TVLDSIRFRYLLSEKLGVDVKNVHGY-IIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCN 59
Query: 306 --WLEEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNG 363
++ K G I K ++ AVSI +++ + + G NG
Sbjct: 60 FTEEDKKKIAEDVKTAGATIIKNKGATYYGIAVSINTIVET--LLKNQNTIRTVGTVING 117
Query: 364 NPYGIAEDIVFSMPCRSKK 382
YGI ED+ S+P
Sbjct: 118 M-YGI-EDVAISLPSIVNS 134
>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate
dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId:
1583]}
Length = 163
Score = 62.2 bits (150), Expect = 3e-12
Identities = 21/135 (15%), Positives = 39/135 (28%), Gaps = 10/135 (7%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL 307
T LD R + + + VS G H +Q + R+ G P+ +
Sbjct: 2 TLLDTARMQRAVGEAFDLDPRSVSGY-NLGEHGNSQFVAWSTVRVMGQPIVTLADAGDID 60
Query: 308 EEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYG 367
E +K GG + ++ A S + K+ + +
Sbjct: 61 LAAIEEEARK-GGFTVLNGKGYTSYGVATSAIRIAKA--------VMADAHAELVVSNRR 111
Query: 368 IAEDIVFSMPCRSKK 382
+ S P +
Sbjct: 112 DDMGMYLSYPAIIGR 126
>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus
casei [TaxId: 1582]}
Length = 172
Score = 61.4 bits (148), Expect = 6e-12
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 8/135 (5%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL 307
T LD R + +A V V I G H T+ P + +A I G+ + E +K H +
Sbjct: 1 TSLDTARFRQSIAEMVNVDARSVHAY-IMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEI 59
Query: 308 EEGFTETIQKRG---GLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGN 364
+E + + I K ++ A ++ K+++ E VY +G
Sbjct: 60 KEDKLVKMFEDVRDAAYEIIKLKGATFYGIATALARISKAIL--NDENAVLPLSVYMDG- 116
Query: 365 PYGIAEDIVFSMPCR 379
YGI D+ P
Sbjct: 117 QYGI-NDLYIGTPAV 130
>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma
gondii [TaxId: 5811]}
Length = 174
Score = 60.3 bits (145), Expect = 2e-11
Identities = 30/136 (22%), Positives = 50/136 (36%), Gaps = 7/136 (5%)
Query: 250 LDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEE 309
LD R + +A V V + G H VP +NG P+++ IKD E+
Sbjct: 4 LDSGRFRRYVADALSVSPRDVQAT-VIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEK 62
Query: 310 GFTETIQK---RGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPY 366
E + GG +++ G+ SA + AM + + S Y
Sbjct: 63 QLEEIAEHTKVSGGEIVRFLGQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCN--GEY 120
Query: 367 GIAEDIVFSMPCRSKK 382
G+ +D+ +P
Sbjct: 121 GL-KDMFIGLPAVIGG 135
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 57.8 bits (139), Expect = 7e-11
Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 10/137 (7%)
Query: 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR 158
+ GA G + + F ++ + + G AM+L + + +
Sbjct: 3 LGFVGA-GRVGSTSAFTCLL-------NLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDK 54
Query: 159 EVK-IGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVK 217
K +G Y L + +E ++ R PGM R L N I + K + + K
Sbjct: 55 YPKIVGGADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKI-VENAPESK 113
Query: 218 VIVVGNPCNTNALICLK 234
++VV NP + I K
Sbjct: 114 ILVVTNPMDVMTYIMWK 130
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 57.4 bits (138), Expect = 8e-11
Identities = 21/140 (15%), Positives = 48/140 (34%), Gaps = 13/140 (9%)
Query: 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR 158
I + G G + + L A Q +A + + + ++ ++ +D++ L
Sbjct: 4 IGIIGL-GNVGAAVAHGLIA-------QGVADDYVFIDANEAKVKADQIDFQDAMANLEA 55
Query: 159 EVKIGINPYELFEDAEWALLIGAKPRG----PGMERAGLLDINGQIFAEQGKALNAVASR 214
I IN + DA+ + + P +R L + G +
Sbjct: 56 HGNIVINDWAALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTN-LKESGF 114
Query: 215 NVKVIVVGNPCNTNALICLK 234
+ ++V+ NP + +
Sbjct: 115 HGVLVVISNPVDVITALFQH 134
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 140
Score = 56.6 bits (136), Expect = 2e-10
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 10/138 (7%)
Query: 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR 158
I + G G + + F L + A +++ + + EG A++L P R
Sbjct: 3 IGIVGL-GRVGSSTAFALLM-------KGFAREMVLIDVDKKRAEGDALDLIHGT-PFTR 53
Query: 159 EVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKV 218
I Y + ++ ++ P+ PG R LL N ++ E + ++ A + V
Sbjct: 54 RANIYAGDYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAP-DSIV 112
Query: 219 IVVGNPCNTNALICLKNA 236
IVV NP + LK +
Sbjct: 113 IVVTNPVDVLTYFFLKES 130
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 56.1 bits (135), Expect = 2e-10
Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 9/136 (6%)
Query: 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR 158
+AV GA G + + L F A + IA +++ + + + +E ++++
Sbjct: 4 LAVIGA-GAVGSTLAFAAAQ-------RGIAREIVLEDIAKERVEAEVLDMQHGSSFYPT 55
Query: 159 EVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKV 218
G + E+ DA+ ++ + PG R L+ I L VA N
Sbjct: 56 VSIDGSDDPEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAP-NAIY 114
Query: 219 IVVGNPCNTNALICLK 234
+++ NP + + K
Sbjct: 115 MLITNPVDIATHVAQK 130
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 55.8 bits (134), Expect = 4e-10
Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 9/136 (6%)
Query: 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR 158
+ V GA G + +F L Q IA +++ + + G AM+ +
Sbjct: 9 VVVIGA-GFVGASYVFALMN-------QGIADEIVLIDANESKAIGDAMDFNHGKVFAPK 60
Query: 159 EVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKV 218
V I Y+ DA+ ++ + PG R L+D N IF +++ +
Sbjct: 61 PVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESV-MASGFQGLF 119
Query: 219 IVVGNPCNTNALICLK 234
+V NP + K
Sbjct: 120 LVATNPVDILTYATWK 135
>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 161
Score = 56.0 bits (134), Expect = 4e-10
Identities = 23/135 (17%), Positives = 43/135 (31%), Gaps = 10/135 (7%)
Query: 248 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWL 307
RLD R + L+ + V I G H QVP F ++G + + + L
Sbjct: 3 GRLDSARFRYVLSEEFDAPVQNVEGT-ILGEHGDAQVPVFSKVSVDGTDPEFSGDEKEQL 61
Query: 308 EEGFTETIQKRGGLLIKKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTNGNPYG 367
E+ + + ++ A + +++++ T E
Sbjct: 62 LGDLQESAMD-----VIERKGATEWGPARGVAHMVEAILHDTGEVLP----ASVKLEGEF 112
Query: 368 IAEDIVFSMPCRSKK 382
ED F +P
Sbjct: 113 GHEDTAFGVPVSLGS 127
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 53.5 bits (128), Expect = 2e-09
Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 12/148 (8%)
Query: 87 EEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVA 146
EE T K I V G G + + + +A +L + L+G
Sbjct: 14 EEATVPNNK---ITVVGV-GQVGMACAISILG-------KSLADELALVDVLEDKLKGEM 62
Query: 147 MELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGK 206
M+L+ L + Y + +++ ++ + G R L+ N +F
Sbjct: 63 MDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIP 122
Query: 207 ALNAVASRNVKVIVVGNPCNTNALICLK 234
+ S + +IVV NP + + K
Sbjct: 123 QI-VKYSPDCIIIVVSNPVDILTYVTWK 149
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 49.2 bits (117), Expect = 8e-08
Identities = 30/149 (20%), Positives = 50/149 (33%), Gaps = 12/149 (8%)
Query: 86 AEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGV 145
E+ S K I V G G + + G +AL + L G
Sbjct: 12 VPEDKLSRCK---ITVVGV-GDVGMACAISILLK---GLADELALV----DADTDKLRGE 60
Query: 146 AMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQG 205
A++L+ L + Y + +++ ++ G R LL N I
Sbjct: 61 ALDLQHGSLFLSTPKIVFGKDYNVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIV 120
Query: 206 KALNAVASRNVKVIVVGNPCNTNALICLK 234
+ S + K+IVV NP + + K
Sbjct: 121 PGV-IQNSPDCKIIVVTNPVDILTYVVWK 148
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 48.9 bits (116), Expect = 9e-08
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 10/143 (6%)
Query: 92 SWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELED 151
S + + G G + + F +A Q IA + + + +G A++LED
Sbjct: 1 SMPNHQKVVLVGD-GAVGSSYAFAMAQ-------QGIAEEFVIVDVVKDRTKGDALDLED 52
Query: 152 SLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAV 211
+ KI Y +DA+ ++ P+ PG R L++ N I + K +
Sbjct: 53 AQ-AFTAPKKIYSGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS 111
Query: 212 ASRNVKVIVVGNPCNTNALICLK 234
+ +V NP + K
Sbjct: 112 GF-DGIFLVAANPVDILTYATWK 133
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 48.5 bits (115), Expect = 9e-08
Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR 158
I++ GA G + + LAA + + ++ + +G A++L ++
Sbjct: 4 ISIIGA-GFVGSTTAHWLAA-------KELG-DIVLLDIVEGVPQGKALDLYEASPIEGF 54
Query: 159 EVKI-GINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVK 217
+V++ G N Y +++ ++ PR PGM R L+ +N I A S N
Sbjct: 55 DVRVTGTNNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQA-APLSPNAV 113
Query: 218 VIVVGNPCNTNALICLK 234
+I+V NP + + +
Sbjct: 114 IIMVNNPLDAMTYLAAE 130
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 43.5 bits (102), Expect = 6e-06
Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 10/136 (7%)
Query: 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR 158
+A+ GA G + F +A + A +L+ + + G AM++ L P +
Sbjct: 4 VAIIGA-GFVGASAAFTMAL-------RQTANELVLIDVFKEKAIGEAMDINHGL-PFMG 54
Query: 159 EVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKV 218
++ + Y +D + ++ R PG R L N I E + + +
Sbjct: 55 QMSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQN-IMKYYNHGVI 113
Query: 219 IVVGNPCNTNALICLK 234
+VV NP + + K
Sbjct: 114 LVVSNPVDIITYMIQK 129
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii
[TaxId: 5811]}
Length = 154
Score = 38.9 bits (90), Expect = 3e-04
Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 13/146 (8%)
Query: 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSL 153
++ +A+ G+ GMI + + A E+ + L + + + + + S+
Sbjct: 5 QRRKKVAMIGS-GMIGGTMGYLCALREL------ADVVLYDVVKGMPEGKALDLSHVTSV 57
Query: 154 FPLLREVKIGINPYELFEDAEWALLIGAKPRGPG-----MERAGLLDINGQIFAEQGKAL 208
V+ + A+ ++ + PG R LL N +I E G+ +
Sbjct: 58 VDTNVSVRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNI 117
Query: 209 NAVASRNVKVIVVGNPCNTNALICLK 234
+IVV NP + + +
Sbjct: 118 KKY-CPKTFIIVVTNPLDCMVKVMCE 142
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA
{Bacillus subtilis [TaxId: 1423]}
Length = 167
Score = 37.7 bits (87), Expect = 8e-04
Identities = 20/167 (11%), Positives = 47/167 (28%), Gaps = 25/167 (14%)
Query: 94 KKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSL 153
KK +I ++G ++ L P + + L ER + +A + +
Sbjct: 1 KKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKER----QDRIAGACDVFI 56
Query: 154 --FPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAV 211
E +P E F D ++ + + + + + ++ +
Sbjct: 57 REKAPDIEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGI 116
Query: 212 ASR-------------------NVKVIVVGNPCNTNALICLKNAPSI 239
A + ++ NP A + P+
Sbjct: 117 AYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPNS 163
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga
maritima [TaxId: 2336]}
Length = 162
Score = 35.4 bits (81), Expect = 0.004
Identities = 20/159 (12%), Positives = 39/159 (24%), Gaps = 23/159 (14%)
Query: 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR 158
IAV G L+ L + + E+ + + ++ L
Sbjct: 3 IAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEK-----QKIVVDFVKRLVKDRF 57
Query: 159 EVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN----GQIFAEQGKALNAVASR 214
+V I DA++ + G E + + GQ G A+ +
Sbjct: 58 KVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAF 117
Query: 215 NV--------------KVIVVGNPCNTNALICLKNAPSI 239
+ ++ NP
Sbjct: 118 PIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYE 156
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 31.2 bits (70), Expect = 0.11
Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 14/141 (9%)
Query: 99 IAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLR 158
I + G+ GMI + + + + +L ++
Sbjct: 6 IVLVGS-GMIGGVMATLIVQ-------KNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSN 57
Query: 159 EVKIGINPYELFEDAEWALLIGAKPRGPGME-----RAGLLDINGQIFAEQGKALNAVAS 213
G N Y+ A+ ++ + PG R LL +N +I E G +
Sbjct: 58 CKVSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCP 117
Query: 214 RNVKVIVVGNPCNTNALICLK 234
N +IVV NP + + +
Sbjct: 118 -NAFIIVVTNPVDVMVQLLHQ 137
>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 232
Score = 29.7 bits (65), Expect = 0.43
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 85 KAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAA 118
K E+ + K ++ + GA+G LL ++
Sbjct: 5 KLREDFRMQNK--SVFILGASGETGRVLLKEILE 36
>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 346
Score = 30.0 bits (66), Expect = 0.52
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 95 KMVNIAVSGAAGMIANHLLFKLAA 118
+ NI V+G AG I ++ + +
Sbjct: 1 QFKNIIVTGGAGFIGSNFVHYVYN 24
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 363
Score = 28.4 bits (62), Expect = 1.6
Identities = 8/25 (32%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query: 94 KKMVNIAVSGAAGMIANHLLFKLAA 118
+ + I+++GA G IA+H+ +L
Sbjct: 14 ENL-KISITGAGGFIASHIARRLKH 37
>d1xrsa_ c.1.19.4 (A:) D-lysine 5,6-aminomutase alpha subunit, KamD
{Clostridium sticklandii [TaxId: 1511]}
Length = 516
Score = 28.2 bits (63), Expect = 1.9
Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 11/61 (18%)
Query: 139 LQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDING 198
+ A+E + + L D+L+ +L IN D ++ +I AG++ G
Sbjct: 248 MGAIERLDVMLNDALYGILFR---DINMQRTMIDQNFSRII--------NGFAGVIINTG 296
Query: 199 Q 199
+
Sbjct: 297 E 297
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 205
Score = 27.7 bits (60), Expect = 2.0
Identities = 6/24 (25%), Positives = 9/24 (37%)
Query: 95 KMVNIAVSGAAGMIANHLLFKLAA 118
+ IA+ GA G L +
Sbjct: 2 AVKKIAIFGATGQTGLTTLAQAVQ 25
>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase
(RmlD) {Salmonella enterica serovar typhimurium [TaxId:
90371]}
Length = 298
Score = 28.0 bits (60), Expect = 2.3
Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 98 NIAVSGAAGMIANHLLFKLAA-GEVLGPD 125
NI + G G + L LA G ++ D
Sbjct: 2 NILLFGKTGQVGWELQRSLAPVGNLIALD 30
>d2g8la1 e.50.1.1 (A:1-284) Hypothetical protein PH1575 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 284
Score = 27.6 bits (61), Expect = 2.7
Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 17/116 (14%)
Query: 49 ISCSVNQVQAPVAVEQDDPKSKTNDCYGVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMI 108
++C NQ Q V + D + L E + A +I
Sbjct: 8 LTCMANQCQRIVEMATQDMDIRRRAMILAAKLLAKEYNENAIPAI----------AGSLI 57
Query: 109 ANHLLFKLAAGEVLGPDQPIA-LKLLGSERSLQALEGVAMELEDSLFPLLREVKIG 163
L + LG D P KL E + + + + +L+ ++ IG
Sbjct: 58 FLELY------KFLGNDDPFIEYKLKSEEMARKVADIIKRKLKLDFELAVKLAIIG 107
>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 281
Score = 27.5 bits (59), Expect = 2.9
Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 98 NIAVSGAAGMIANHLLFKLAAG--EVLGPD 125
I ++GA G + + +L EV+ D
Sbjct: 3 KILITGANGQLGREIQKQLKGKNVEVIPTD 32
>d1gl4a1 d.22.1.2 (A:399-631) Domain G2 of nidogen-1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 233
Score = 27.1 bits (60), Expect = 3.1
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 5 AQLSPSSYTETTRLSSSQLSLSSTHLSSLRRRAFRPIIGPRNPTISCSVNQV 56
A + YTE SSS ++ SST ++ + T Q
Sbjct: 135 ASVHIEPYTELYHYSSSVITSSSTREYTVMEPDQDG--AAPSHTHIYQWRQT 184
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella
typhimurium [TaxId: 90371]}
Length = 411
Score = 27.4 bits (60), Expect = 3.2
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 7/36 (19%)
Query: 166 PYELFEDAEWALLIGAKPRGPGMERA---GLLDING 198
Y L L+I P PG+ A GLLDIN
Sbjct: 380 IYHLLH----CLVIPRLPLAPGLAPAVAAGLLDINA 411
>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptomyces venezuelae [TaxId: 54571]}
Length = 322
Score = 27.5 bits (60), Expect = 3.3
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 98 NIAVSGAAGMIANHLLFKLAAG--EVLGPDQPIALKLLGSERSLQALEGV 145
+ V+G AG I +H + +L AG + D+ I L L + L V
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV 51
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240
(T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 252
Score = 27.1 bits (58), Expect = 3.4
Identities = 6/23 (26%), Positives = 11/23 (47%)
Query: 96 MVNIAVSGAAGMIANHLLFKLAA 118
+ + V+GA+G + KL
Sbjct: 3 LPTVLVTGASGRTGQIVYKKLKE 25
>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 361
Score = 27.4 bits (60), Expect = 3.6
Identities = 9/49 (18%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 98 NIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVA 146
I ++G AG I + ++ + D + + L +L++L ++
Sbjct: 2 KILITGGAGFIGSAVVRHIIK---NTQDTVVNIDKLTYAGNLESLSDIS 47
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant
arborvitae (Thuja plicata) [TaxId: 3316]}
Length = 312
Score = 27.0 bits (58), Expect = 3.9
Identities = 4/25 (16%), Positives = 9/25 (36%)
Query: 94 KKMVNIAVSGAAGMIANHLLFKLAA 118
K + + G G I ++ +
Sbjct: 1 DKKSRVLIVGGTGYIGKRIVNASIS 25
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor,
TRCF {Escherichia coli [TaxId: 562]}
Length = 211
Score = 26.5 bits (58), Expect = 4.4
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 76 GVFCLTYDLKAEEETKSWKKMVNIAVS---GAAGMIANHLLFKLAAGEVLGPDQPIALKL 132
L T + K++ IA GA +A H L AGE+LG +Q +++
Sbjct: 132 AYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMET 191
Query: 133 LGSERSLQALE 143
+G ++ LE
Sbjct: 192 IGFSLYMELLE 202
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces
salmonicolor [TaxId: 5005]}
Length = 342
Score = 26.7 bits (57), Expect = 4.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 99 IAVSGAAGMIANHLLFKLAA 118
+ V+GA G +A+H++ +L
Sbjct: 14 VLVTGANGFVASHVVEQLLE 33
>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 212
Score = 26.3 bits (56), Expect = 6.1
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 99 IAVSGAAGMIANHLLFKLAA 118
+ ++GA G+ HLL ++ +
Sbjct: 5 VLLAGATGLTGEHLLDRILS 24
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 171
Score = 25.9 bits (56), Expect = 6.8
Identities = 7/86 (8%), Positives = 21/86 (24%), Gaps = 9/86 (10%)
Query: 160 VKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDI--------NGQIFAEQGKALNAV 211
+ + E RG + ++ + F + + + +
Sbjct: 82 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKL 141
Query: 212 ASRNVKVIVVGNPCNTNALICLKNAP 237
+ + NP + + P
Sbjct: 142 SP-KAWYLQAANPIFEGTTLVTRTVP 166
>d2i0za2 e.74.1.1 (A:193-361) Flavoprotein BC4706 {Bacillus cereus
[TaxId: 1396]}
Length = 169
Score = 25.5 bits (55), Expect = 8.5
Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 281 TTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKRGGLLIKKWGRSSAASTAVS 337
+ P + + GL +++I + L I + +L +G S A+ S
Sbjct: 7 LSNEPFIRDRSLQGLALRDI--NLSVLNPKGKAIISHKMDMLFTHFGLSGPAALRCS 61
>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde
dehydrogenase {Escherichia coli [TaxId: 562]}
Length = 146
Score = 25.4 bits (55), Expect = 9.9
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 96 MVNIAVSGAAGMIANHLLFKLAA 118
M N+ G GM+ + L+ ++
Sbjct: 1 MQNVGFIGWRGMVGSVLMQRMVE 23
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.132 0.387
Gapped
Lambda K H
0.267 0.0548 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,431,540
Number of extensions: 65863
Number of successful extensions: 233
Number of sequences better than 10.0: 1
Number of HSP's gapped: 206
Number of HSP's successfully gapped: 65
Length of query: 398
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 311
Effective length of database: 1,213,086
Effective search space: 377269746
Effective search space used: 377269746
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.0 bits)