Query 015899
Match_columns 398
No_of_seqs 295 out of 1593
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 04:27:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015899.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015899hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tsm_A IGPS, indole-3-glycerol 100.0 1.3E-73 4.6E-78 553.8 30.8 267 120-395 3-269 (272)
2 4a29_A Engineered retro-aldol 100.0 5.2E-71 1.8E-75 529.8 24.9 241 124-388 6-246 (258)
3 1i4n_A Indole-3-glycerol phosp 100.0 2.4E-69 8.4E-74 518.7 24.0 248 125-393 1-248 (251)
4 1pii_A N-(5'phosphoribosyl)ant 100.0 3.8E-69 1.3E-73 554.1 26.8 254 124-394 2-255 (452)
5 3qja_A IGPS, indole-3-glycerol 100.0 7.4E-68 2.5E-72 513.1 28.4 259 123-394 3-261 (272)
6 1vc4_A Indole-3-glycerol phosp 100.0 5.5E-63 1.9E-67 474.2 22.7 247 120-393 5-254 (254)
7 3q58_A N-acetylmannosamine-6-p 100.0 8.3E-33 2.8E-37 261.3 18.7 194 178-392 19-227 (229)
8 3igs_A N-acetylmannosamine-6-p 100.0 3E-32 1E-36 257.8 17.6 195 178-393 19-228 (232)
9 2yzr_A Pyridoxal biosynthesis 100.0 8.4E-33 2.9E-37 273.2 4.6 195 191-393 19-289 (330)
10 4adt_A Pyridoxine biosynthetic 100.0 8E-32 2.7E-36 264.1 10.4 191 189-393 20-256 (297)
11 1hg3_A Triosephosphate isomera 100.0 1.2E-27 4.2E-32 226.2 16.4 182 198-393 23-223 (225)
12 1w0m_A TIM, triosephosphate is 99.9 1.4E-27 4.8E-32 226.0 14.1 182 198-393 20-220 (226)
13 2h6r_A Triosephosphate isomera 99.9 5.5E-26 1.9E-30 212.7 12.8 164 220-393 35-217 (219)
14 3o07_A Pyridoxine biosynthesis 99.9 6.5E-26 2.2E-30 219.5 9.5 184 198-393 19-247 (291)
15 2w6r_A Imidazole glycerol phos 99.9 4.2E-22 1.4E-26 188.2 16.0 194 190-393 23-247 (266)
16 2nv1_A Pyridoxal biosynthesis 99.9 5.4E-23 1.8E-27 200.3 9.3 188 191-393 23-256 (305)
17 1thf_D HISF protein; thermophI 99.9 8.8E-21 3E-25 177.6 20.4 193 194-396 27-246 (253)
18 1ka9_F Imidazole glycerol phos 99.9 4E-21 1.4E-25 179.8 17.3 192 195-396 29-247 (252)
19 2y88_A Phosphoribosyl isomeras 99.9 2E-21 6.7E-26 181.1 13.6 184 198-391 32-241 (244)
20 1y0e_A Putative N-acetylmannos 99.8 1.6E-20 5.3E-25 173.1 14.8 179 193-389 19-218 (223)
21 1yxy_A Putative N-acetylmannos 99.8 2.9E-19 9.9E-24 166.2 21.2 177 194-392 31-229 (234)
22 1vzw_A Phosphoribosyl isomeras 99.8 2.1E-20 7E-25 174.8 13.3 184 198-391 33-238 (244)
23 1qo2_A Molecule: N-((5-phospho 99.8 1.5E-20 5.1E-25 175.9 6.9 183 197-392 30-240 (241)
24 3tdn_A FLR symmetric alpha-bet 99.8 5.5E-19 1.9E-23 166.1 7.6 189 195-393 33-247 (247)
25 2zbt_A Pyridoxal biosynthesis 99.8 1.2E-18 4.2E-23 168.3 9.1 180 200-393 31-256 (297)
26 2v82_A 2-dehydro-3-deoxy-6-pho 99.7 1.9E-17 6.6E-22 151.7 15.4 174 198-393 20-198 (212)
27 1h5y_A HISF; histidine biosynt 99.7 8.5E-17 2.9E-21 148.4 16.3 188 193-392 29-244 (253)
28 3f4w_A Putative hexulose 6 pho 99.7 4.9E-16 1.7E-20 141.9 11.9 182 199-393 15-205 (211)
29 1wa3_A 2-keto-3-deoxy-6-phosph 99.6 2.7E-15 9.3E-20 136.5 15.5 183 178-393 11-198 (205)
30 2qjg_A Putative aldolase MJ040 99.6 9.9E-16 3.4E-20 145.4 11.1 191 177-393 26-255 (273)
31 3o63_A Probable thiamine-phosp 99.6 5.3E-15 1.8E-19 140.9 14.2 177 197-393 43-237 (243)
32 1xi3_A Thiamine phosphate pyro 99.5 1.9E-13 6.5E-18 124.2 16.5 170 198-393 27-208 (215)
33 2agk_A 1-(5-phosphoribosyl)-5- 99.5 1.8E-13 6.2E-18 131.2 13.7 184 195-389 36-253 (260)
34 1jvn_A Glutamine, bifunctional 99.4 5.1E-13 1.7E-17 140.4 14.0 190 194-393 277-544 (555)
35 1xm3_A Thiazole biosynthesis p 99.4 9.9E-13 3.4E-17 126.1 14.8 200 178-393 4-225 (264)
36 2fli_A Ribulose-phosphate 3-ep 99.4 2.3E-12 7.7E-17 118.1 16.0 189 197-393 16-216 (220)
37 1gox_A (S)-2-hydroxy-acid oxid 99.4 1.5E-13 5.2E-18 137.6 7.7 190 180-381 114-315 (370)
38 1geq_A Tryptophan synthase alp 99.4 1.2E-12 4.2E-17 122.3 11.5 197 176-392 4-238 (248)
39 4gj1_A 1-(5-phosphoribosyl)-5- 99.4 1.3E-11 4.3E-16 117.1 17.9 182 196-387 30-236 (243)
40 1rpx_A Protein (ribulose-phosp 99.4 1E-11 3.4E-16 115.2 16.6 190 198-393 24-225 (230)
41 2tps_A Protein (thiamin phosph 99.4 1.2E-11 4.1E-16 113.5 15.0 173 199-393 33-218 (227)
42 3ajx_A 3-hexulose-6-phosphate 99.3 1E-11 3.5E-16 112.8 14.2 180 199-393 15-204 (207)
43 1yad_A Regulatory protein TENI 99.3 5.2E-12 1.8E-16 116.4 12.4 167 203-393 35-210 (221)
44 2yw3_A 4-hydroxy-2-oxoglutarat 99.2 1.5E-10 5.1E-15 107.3 15.7 182 178-393 14-199 (207)
45 1tqj_A Ribulose-phosphate 3-ep 99.2 1.4E-10 4.7E-15 108.9 15.6 197 187-393 8-219 (230)
46 4e38_A Keto-hydroxyglutarate-a 99.2 1.1E-10 3.9E-15 110.6 14.3 173 178-381 35-208 (232)
47 1p0k_A Isopentenyl-diphosphate 99.2 9.6E-11 3.3E-15 115.7 13.7 157 188-381 118-286 (349)
48 1h1y_A D-ribulose-5-phosphate 99.2 5E-10 1.7E-14 104.3 16.6 186 198-393 20-219 (228)
49 1rd5_A Tryptophan synthase alp 99.2 2.8E-10 9.6E-15 107.8 15.1 203 175-392 16-254 (262)
50 1qop_A Tryptophan synthase alp 99.2 3E-10 1E-14 108.7 15.3 190 175-381 15-240 (268)
51 3ovp_A Ribulose-phosphate 3-ep 99.2 7.3E-10 2.5E-14 104.3 16.2 193 187-393 8-215 (228)
52 3inp_A D-ribulose-phosphate 3- 99.2 3.5E-10 1.2E-14 108.0 13.9 197 186-393 30-241 (246)
53 1wbh_A KHG/KDPG aldolase; lyas 99.1 1.4E-09 4.9E-14 101.4 16.6 175 178-384 17-193 (214)
54 3khj_A Inosine-5-monophosphate 99.1 1.2E-09 4E-14 109.5 15.7 170 200-383 59-244 (361)
55 3nl6_A Thiamine biosynthetic b 99.1 4.1E-10 1.4E-14 118.3 12.9 182 196-393 24-227 (540)
56 3ffs_A Inosine-5-monophosphate 99.1 1E-09 3.5E-14 111.5 15.2 127 251-383 146-283 (400)
57 3jr2_A Hexulose-6-phosphate sy 99.1 1.1E-10 3.7E-15 108.1 6.6 183 199-393 21-211 (218)
58 2p10_A MLL9387 protein; putati 99.1 1.1E-09 3.6E-14 106.6 13.5 187 201-393 39-276 (286)
59 2ekc_A AQ_1548, tryptophan syn 99.1 1.8E-09 6.3E-14 103.1 14.5 200 176-393 16-254 (262)
60 1vhc_A Putative KHG/KDPG aldol 99.1 3.6E-09 1.2E-13 99.5 15.9 174 178-383 18-193 (224)
61 1mxs_A KDPG aldolase; 2-keto-3 99.1 1.3E-09 4.4E-14 102.6 12.8 173 178-382 27-201 (225)
62 3bo9_A Putative nitroalkan dio 99.0 5.8E-09 2E-13 102.5 17.8 163 201-383 41-213 (326)
63 1wv2_A Thiazole moeity, thiazo 99.0 1.2E-09 4.1E-14 105.2 12.2 185 196-392 29-233 (265)
64 3ctl_A D-allulose-6-phosphate 99.0 3.7E-09 1.3E-13 99.8 15.4 197 187-393 4-215 (231)
65 1ujp_A Tryptophan synthase alp 99.0 2.9E-09 1E-13 102.7 14.3 186 176-382 15-236 (271)
66 2htm_A Thiazole biosynthesis p 99.0 3.1E-09 1.1E-13 102.5 13.7 179 196-392 22-224 (268)
67 3vnd_A TSA, tryptophan synthas 99.0 2.9E-09 1E-13 102.7 13.6 190 175-380 16-240 (267)
68 2gjl_A Hypothetical protein PA 99.0 6.9E-09 2.4E-13 101.4 16.4 167 201-383 30-209 (328)
69 3nav_A Tryptophan synthase alp 99.0 3.5E-09 1.2E-13 102.4 14.0 193 175-380 18-242 (271)
70 3lab_A Putative KDPG (2-keto-3 99.0 2.7E-09 9.1E-14 100.4 12.7 174 178-381 14-193 (217)
71 1tqx_A D-ribulose-5-phosphate 99.0 6.1E-09 2.1E-13 98.2 14.5 194 187-393 9-219 (227)
72 3bw2_A 2-nitropropane dioxygen 98.9 7.8E-08 2.7E-12 95.6 19.9 125 251-384 112-246 (369)
73 2z6i_A Trans-2-enoyl-ACP reduc 98.9 3E-08 1E-12 97.4 16.5 165 200-384 26-200 (332)
74 4avf_A Inosine-5'-monophosphat 98.9 1.8E-08 6.2E-13 104.4 14.9 181 193-383 162-369 (490)
75 1w8s_A FBP aldolase, fructose- 98.9 9.5E-08 3.3E-12 91.5 18.9 174 195-393 39-249 (263)
76 3cu2_A Ribulose-5-phosphate 3- 98.9 1.6E-08 5.6E-13 95.9 13.1 192 186-392 16-233 (237)
77 3ceu_A Thiamine phosphate pyro 98.9 2.9E-09 9.7E-14 98.1 7.1 157 200-385 16-182 (210)
78 1vrd_A Inosine-5'-monophosphat 98.8 1.2E-08 4.1E-13 105.0 12.0 181 193-381 170-375 (494)
79 3usb_A Inosine-5'-monophosphat 98.8 7.5E-08 2.6E-12 100.3 17.5 185 193-383 189-396 (511)
80 4fo4_A Inosine 5'-monophosphat 98.8 1.3E-07 4.5E-12 94.9 18.1 128 250-383 109-248 (366)
81 1to3_A Putative aldolase YIHT; 98.8 1.9E-08 6.7E-13 98.5 11.8 175 197-388 48-271 (304)
82 1eep_A Inosine 5'-monophosphat 98.8 2.3E-08 7.7E-13 100.7 12.4 126 252-383 156-293 (404)
83 3r2g_A Inosine 5'-monophosphat 98.7 3.5E-07 1.2E-11 91.8 18.1 170 200-383 56-236 (361)
84 1q6o_A Humps, 3-keto-L-gulonat 98.7 1.1E-07 3.6E-12 87.7 12.9 185 198-393 14-209 (216)
85 2nli_A Lactate oxidase; flavoe 98.7 1.1E-07 3.6E-12 95.4 13.8 180 187-381 86-319 (368)
86 1viz_A PCRB protein homolog; s 98.7 5.1E-08 1.8E-12 92.8 9.9 162 199-383 22-218 (240)
87 4fxs_A Inosine-5'-monophosphat 98.7 3.3E-08 1.1E-12 102.6 9.2 179 195-383 166-371 (496)
88 3glc_A Aldolase LSRF; TIM barr 98.7 1.4E-07 4.9E-12 92.3 13.1 124 253-393 130-275 (295)
89 1jcn_A Inosine monophosphate d 98.7 3E-07 1E-11 95.2 15.8 183 194-383 189-395 (514)
90 2f6u_A GGGPS, (S)-3-O-geranylg 98.6 2E-08 7E-13 95.3 4.6 168 199-390 22-231 (234)
91 1zfj_A Inosine monophosphate d 98.5 3.2E-06 1.1E-10 86.7 19.0 182 194-381 167-371 (491)
92 3tha_A Tryptophan synthase alp 98.5 1.6E-06 5.4E-11 83.2 14.8 173 199-380 30-232 (252)
93 1ypf_A GMP reductase; GUAC, pu 98.4 3.9E-06 1.3E-10 82.7 15.8 170 200-380 60-244 (336)
94 3vk5_A MOEO5; TIM barrel, tran 98.4 2.9E-06 9.9E-11 82.6 13.2 177 199-393 55-273 (286)
95 2c6q_A GMP reductase 2; TIM ba 98.3 5.3E-06 1.8E-10 82.6 14.2 122 254-381 123-258 (351)
96 3iwp_A Copper homeostasis prot 98.3 1.4E-05 4.7E-10 78.0 16.5 163 201-374 50-237 (287)
97 1ep3_A Dihydroorotate dehydrog 98.3 1.3E-05 4.3E-10 76.8 15.6 154 232-390 91-285 (311)
98 3exr_A RMPD (hexulose-6-phosph 98.3 3.1E-06 1E-10 79.1 11.0 173 211-393 31-214 (221)
99 2qr6_A IMP dehydrogenase/GMP r 98.2 1.8E-05 6.1E-10 79.2 15.0 149 231-383 149-314 (393)
100 3cwo_X Beta/alpha-barrel prote 98.2 2.9E-05 9.8E-10 69.4 14.7 181 201-395 16-224 (237)
101 3w01_A Heptaprenylglyceryl pho 98.2 5.9E-06 2E-10 78.5 10.6 161 201-381 27-220 (235)
102 3vzx_A Heptaprenylglyceryl pho 98.2 5.9E-06 2E-10 78.2 10.4 160 202-388 23-221 (228)
103 3vkj_A Isopentenyl-diphosphate 98.2 1.6E-05 5.6E-10 79.7 13.2 168 177-380 120-301 (368)
104 1jub_A Dihydroorotate dehydrog 98.2 3.5E-05 1.2E-09 74.3 15.1 148 239-389 93-286 (311)
105 3sr7_A Isopentenyl-diphosphate 98.1 2.8E-05 9.5E-10 78.1 14.6 170 200-380 106-312 (365)
106 1kbi_A Cytochrome B2, L-LCR; f 98.1 5.3E-05 1.8E-09 79.0 16.9 175 199-381 209-438 (511)
107 3sgz_A Hydroxyacid oxidase 2; 98.1 3.6E-05 1.2E-09 77.0 14.4 164 199-380 137-306 (352)
108 2nzl_A Hydroxyacid oxidase 1; 98.1 3.2E-05 1.1E-09 78.2 13.8 168 200-381 114-342 (392)
109 2e6f_A Dihydroorotate dehydrog 98.1 0.00011 3.9E-09 70.7 16.8 157 230-390 82-289 (314)
110 1p4c_A L(+)-mandelate dehydrog 98.1 1.1E-05 3.8E-10 81.0 9.7 101 226-381 213-313 (380)
111 2czd_A Orotidine 5'-phosphate 98.0 8.5E-06 2.9E-10 74.6 7.3 175 198-393 10-203 (208)
112 1me8_A Inosine-5'-monophosphat 98.0 6.2E-05 2.1E-09 78.0 13.2 184 193-382 176-388 (503)
113 2b7n_A Probable nicotinate-nuc 97.9 3.2E-05 1.1E-09 74.6 10.1 117 252-382 134-264 (273)
114 2jbm_A Nicotinate-nucleotide p 97.9 3.3E-05 1.1E-09 75.5 9.3 114 252-382 149-279 (299)
115 1f76_A Dihydroorotate dehydrog 97.9 0.00048 1.7E-08 67.1 17.1 127 260-389 164-333 (336)
116 2cu0_A Inosine-5'-monophosphat 97.9 3.4E-05 1.2E-09 79.4 9.2 134 200-381 230-363 (486)
117 1vcf_A Isopentenyl-diphosphate 97.8 0.00018 6.1E-09 70.4 13.7 174 200-381 78-291 (332)
118 1mzh_A Deoxyribose-phosphate a 97.8 0.0008 2.7E-08 62.7 17.1 161 196-377 19-204 (225)
119 3c2e_A Nicotinate-nucleotide p 97.8 3.3E-05 1.1E-09 75.3 7.7 115 252-382 151-284 (294)
120 1x1o_A Nicotinate-nucleotide p 97.8 8E-05 2.7E-09 72.5 10.2 124 244-382 139-275 (286)
121 3gr7_A NADPH dehydrogenase; fl 97.8 0.00064 2.2E-08 67.2 16.4 157 200-396 147-328 (340)
122 3b0p_A TRNA-dihydrouridine syn 97.8 0.00012 3.9E-09 72.7 11.1 145 239-392 57-242 (350)
123 1o4u_A Type II quinolic acid p 97.8 3.8E-05 1.3E-09 74.8 7.1 94 277-382 179-275 (285)
124 1qap_A Quinolinic acid phospho 97.7 7.8E-05 2.7E-09 72.9 9.0 115 252-381 161-286 (296)
125 2bdq_A Copper homeostasis prot 97.7 0.00033 1.1E-08 66.1 12.6 172 203-386 14-218 (224)
126 1vhn_A Putative flavin oxidore 97.7 0.00098 3.4E-08 64.8 16.3 154 226-392 46-230 (318)
127 1z41_A YQJM, probable NADH-dep 97.7 0.0006 2.1E-08 67.0 14.8 153 200-396 147-328 (338)
128 4ef8_A Dihydroorotate dehydrog 97.7 0.00035 1.2E-08 69.8 13.0 157 229-389 114-321 (354)
129 3tqv_A Nicotinate-nucleotide p 97.7 0.00034 1.2E-08 68.2 12.0 125 238-379 134-274 (287)
130 1ypf_A GMP reductase; GUAC, pu 97.6 0.00031 1.1E-08 69.1 11.9 126 198-325 106-248 (336)
131 1twd_A Copper homeostasis prot 97.6 0.0013 4.4E-08 63.2 15.2 162 200-375 11-198 (256)
132 3oa3_A Aldolase; structural ge 97.6 0.00048 1.6E-08 67.2 12.4 158 197-371 74-259 (288)
133 4fxs_A Inosine-5'-monophosphat 97.6 0.00044 1.5E-08 71.7 12.9 126 196-324 229-371 (496)
134 1qpo_A Quinolinate acid phosph 97.6 0.00028 9.7E-09 68.6 10.0 94 277-382 181-276 (284)
135 2uva_G Fatty acid synthase bet 97.5 0.00056 1.9E-08 81.5 13.9 171 199-383 596-803 (2060)
136 4avf_A Inosine-5'-monophosphat 97.5 0.00059 2E-08 70.6 12.4 125 196-323 227-368 (490)
137 3zwt_A Dihydroorotate dehydrog 97.5 0.00047 1.6E-08 69.1 11.0 127 259-388 174-341 (367)
138 3gnn_A Nicotinate-nucleotide p 97.5 0.00069 2.4E-08 66.4 11.8 125 239-381 146-287 (298)
139 3oix_A Putative dihydroorotate 97.5 0.0021 7.2E-08 63.9 15.5 150 238-389 127-319 (345)
140 1gte_A Dihydropyrimidine dehyd 97.5 0.001 3.4E-08 74.3 14.3 155 229-387 624-829 (1025)
141 3zen_D Fatty acid synthase; tr 97.5 0.00028 9.7E-09 86.6 10.7 174 200-383 442-654 (3089)
142 3tdn_A FLR symmetric alpha-bet 97.4 0.00028 9.5E-09 65.7 7.8 86 299-393 39-126 (247)
143 3hgj_A Chromate reductase; TIM 97.4 0.002 6.7E-08 63.7 14.1 132 255-395 159-338 (349)
144 1vrd_A Inosine-5'-monophosphat 97.4 0.0012 4E-08 67.8 13.0 118 197-317 236-370 (494)
145 4af0_A Inosine-5'-monophosphat 97.4 0.0025 8.4E-08 67.1 15.4 123 254-382 286-420 (556)
146 1jcn_A Inosine monophosphate d 97.4 0.0012 4.1E-08 68.2 13.0 123 197-322 254-393 (514)
147 1ub3_A Aldolase protein; schif 97.4 0.00074 2.5E-08 63.3 10.3 159 196-370 18-200 (220)
148 1eix_A Orotidine 5'-monophosph 97.4 0.00012 4E-09 69.1 4.9 186 198-393 25-239 (245)
149 2w6r_A Imidazole glycerol phos 97.3 0.00083 2.8E-08 62.7 9.7 93 197-290 156-252 (266)
150 3usb_A Inosine-5'-monophosphat 97.3 0.0022 7.6E-08 66.7 13.4 126 196-323 254-395 (511)
151 1thf_D HISF protein; thermophI 97.3 0.0009 3.1E-08 62.0 9.4 93 197-290 151-247 (253)
152 1ka9_F Imidazole glycerol phos 97.3 0.00088 3E-08 62.0 9.2 93 197-290 152-248 (252)
153 3fok_A Uncharacterized protein 97.3 0.0018 6.1E-08 63.7 11.7 171 198-393 72-293 (307)
154 3paj_A Nicotinate-nucleotide p 97.3 0.0013 4.4E-08 65.1 10.8 87 277-378 218-306 (320)
155 1tv5_A Dhodehase, dihydroorota 97.3 0.0019 6.6E-08 66.3 12.4 98 288-388 296-416 (443)
156 4fo4_A Inosine 5'-monophosphat 97.2 0.0023 8E-08 64.1 12.4 125 198-324 108-248 (366)
157 3khj_A Inosine-5-monophosphate 97.2 0.0027 9.1E-08 63.4 12.7 121 200-323 107-243 (361)
158 2c6q_A GMP reductase 2; TIM ba 97.2 0.003 1E-07 62.8 12.7 121 200-323 120-259 (351)
159 3l0g_A Nicotinate-nucleotide p 97.2 0.0016 5.4E-08 63.9 10.3 111 251-378 159-282 (300)
160 1h5y_A HISF; histidine biosynt 97.2 0.0013 4.5E-08 59.9 9.1 93 197-290 154-250 (253)
161 2qr6_A IMP dehydrogenase/GMP r 97.2 0.0043 1.5E-07 61.9 13.5 123 198-323 166-313 (393)
162 3i65_A Dihydroorotate dehydrog 97.2 0.0016 5.6E-08 66.4 10.6 125 261-388 211-388 (415)
163 3ngj_A Deoxyribose-phosphate a 97.1 0.004 1.4E-07 59.2 12.2 162 197-377 43-229 (239)
164 1wv2_A Thiazole moeity, thiazo 97.1 0.0014 4.8E-08 63.1 9.0 73 200-273 146-221 (265)
165 3m47_A Orotidine 5'-phosphate 97.1 0.0078 2.7E-07 56.2 13.9 177 198-393 23-220 (228)
166 1zfj_A Inosine monophosphate d 97.1 0.0041 1.4E-07 63.6 12.9 121 198-321 233-370 (491)
167 3ffs_A Inosine-5-monophosphate 97.0 0.0044 1.5E-07 62.9 12.2 122 200-324 146-283 (400)
168 1vyr_A Pentaerythritol tetrani 97.0 0.0052 1.8E-07 61.2 12.6 125 256-390 169-338 (364)
169 1pii_A N-(5'phosphoribosyl)ant 97.0 0.0085 2.9E-07 61.7 13.7 174 176-374 157-333 (452)
170 2gou_A Oxidoreductase, FMN-bin 97.0 0.0058 2E-07 60.9 12.2 125 256-390 169-337 (365)
171 3sr7_A Isopentenyl-diphosphate 96.9 0.0022 7.4E-08 64.3 9.0 121 197-320 155-311 (365)
172 2wqp_A Polysialic acid capsule 96.9 0.0064 2.2E-07 60.7 12.1 89 272-374 88-180 (349)
173 1eep_A Inosine 5'-monophosphat 96.9 0.0056 1.9E-07 61.4 11.8 118 198-318 153-287 (404)
174 1vzw_A Phosphoribosyl isomeras 96.9 0.0027 9.4E-08 58.5 8.7 94 189-283 138-238 (244)
175 3l5l_A Xenobiotic reductase A; 96.8 0.0064 2.2E-07 60.4 11.3 130 255-393 165-343 (363)
176 2jgq_A Triosephosphate isomera 96.8 0.0013 4.3E-08 62.4 5.6 136 249-389 72-231 (233)
177 1vr6_A Phospho-2-dehydro-3-deo 96.8 0.028 9.6E-07 56.1 15.2 182 176-379 106-314 (350)
178 1me8_A Inosine-5'-monophosphat 96.8 0.0057 1.9E-07 63.3 10.6 122 197-320 241-385 (503)
179 1n7k_A Deoxyribose-phosphate a 96.7 0.052 1.8E-06 51.3 16.2 155 196-370 35-216 (234)
180 3g8r_A Probable spore coat pol 96.7 0.015 5.1E-07 58.1 13.1 93 272-379 75-173 (350)
181 1vs1_A 3-deoxy-7-phosphoheptul 96.7 0.034 1.2E-06 53.7 15.2 181 176-378 38-245 (276)
182 1vli_A Spore coat polysacchari 96.7 0.0086 2.9E-07 60.6 11.3 89 272-374 98-190 (385)
183 1ep3_A Dihydroorotate dehydrog 96.7 0.0025 8.6E-08 60.7 6.9 76 197-273 176-275 (311)
184 2yyu_A Orotidine 5'-phosphate 96.7 0.0075 2.6E-07 56.6 10.0 185 198-393 15-233 (246)
185 2r14_A Morphinone reductase; H 96.7 0.018 6E-07 57.7 13.2 125 256-390 174-343 (377)
186 3nvt_A 3-deoxy-D-arabino-heptu 96.6 0.015 5.2E-07 58.6 12.4 108 254-376 162-284 (385)
187 3r12_A Deoxyribose-phosphate a 96.6 0.031 1E-06 53.8 13.8 159 197-371 59-241 (260)
188 3kts_A Glycerol uptake operon 96.6 0.016 5.4E-07 53.4 11.3 147 206-378 25-182 (192)
189 2i9e_A Triosephosphate isomera 96.6 0.0067 2.3E-07 58.3 9.1 181 199-389 20-245 (259)
190 2htm_A Thiazole biosynthesis p 96.6 0.0052 1.8E-07 59.3 8.1 75 197-273 133-212 (268)
191 2nli_A Lactate oxidase; flavoe 96.6 0.025 8.7E-07 56.4 13.5 91 225-318 216-315 (368)
192 3igs_A N-acetylmannosamine-6-p 96.5 0.012 3.9E-07 55.2 9.7 83 200-284 139-227 (232)
193 3r2g_A Inosine 5'-monophosphat 96.5 0.014 4.8E-07 58.4 10.9 122 198-322 100-234 (361)
194 1dbt_A Orotidine 5'-phosphate 96.5 0.0055 1.9E-07 57.3 7.4 185 198-393 14-232 (239)
195 3tjx_A Dihydroorotate dehydrog 96.4 0.017 5.7E-07 56.9 11.0 43 346-388 277-320 (354)
196 1qo2_A Molecule: N-((5-phospho 96.4 0.006 2E-07 56.3 7.2 93 190-283 136-239 (241)
197 1yya_A Triosephosphate isomera 96.4 0.016 5.3E-07 55.5 10.1 167 214-389 35-247 (250)
198 1icp_A OPR1, 12-oxophytodienoa 96.4 0.023 7.8E-07 56.8 11.8 127 255-390 174-345 (376)
199 1jvn_A Glutamine, bifunctional 96.4 0.0094 3.2E-07 62.5 9.3 92 197-290 452-549 (555)
200 3vk5_A MOEO5; TIM barrel, tran 96.3 0.0061 2.1E-07 59.4 7.1 72 201-274 184-262 (286)
201 1vqt_A Orotidine 5'-phosphate 96.3 0.0063 2.1E-07 56.4 6.9 167 198-393 23-210 (213)
202 3gr7_A NADPH dehydrogenase; fl 96.3 0.011 3.7E-07 58.4 8.9 92 196-290 228-327 (340)
203 3k30_A Histamine dehydrogenase 96.3 0.0092 3.2E-07 63.4 8.9 46 346-391 294-340 (690)
204 3q58_A N-acetylmannosamine-6-p 96.3 0.014 4.6E-07 54.7 9.0 81 200-282 139-225 (229)
205 1r2r_A TIM, triosephosphate is 96.2 0.0023 8E-08 61.1 3.5 175 199-388 21-245 (248)
206 2y88_A Phosphoribosyl isomeras 96.2 0.008 2.7E-07 55.2 6.8 85 198-283 150-241 (244)
207 1o5x_A TIM, triosephosphate is 96.2 0.0052 1.8E-07 58.7 5.6 180 199-389 20-245 (248)
208 1mo0_A TIM, triosephosphate is 96.2 0.003 1E-07 61.2 3.9 182 199-390 40-266 (275)
209 3iv3_A Tagatose 1,6-diphosphat 96.2 0.042 1.4E-06 54.5 12.1 124 250-382 112-287 (332)
210 1ps9_A 2,4-dienoyl-COA reducta 96.1 0.023 7.8E-07 60.1 10.9 47 346-392 280-327 (671)
211 1kbi_A Cytochrome B2, L-LCR; f 96.1 0.047 1.6E-06 56.9 12.5 90 227-319 332-435 (511)
212 1yxy_A Putative N-acetylmannos 96.0 0.0028 9.6E-08 58.2 2.7 78 202-281 145-229 (234)
213 1zco_A 2-dehydro-3-deoxyphosph 96.0 0.17 6E-06 48.2 15.2 181 177-379 24-231 (262)
214 3q94_A Fructose-bisphosphate a 96.0 0.24 8.3E-06 48.1 16.3 135 238-379 79-240 (288)
215 1vcf_A Isopentenyl-diphosphate 96.0 0.046 1.6E-06 53.3 11.3 121 197-320 132-289 (332)
216 1m6j_A TIM, TPI, triosephospha 95.9 0.0052 1.8E-07 59.1 4.3 134 257-390 90-256 (261)
217 1zco_A 2-dehydro-3-deoxyphosph 95.9 0.055 1.9E-06 51.7 11.5 106 254-374 43-163 (262)
218 3i65_A Dihydroorotate dehydrog 95.9 0.0064 2.2E-07 62.0 5.2 74 198-272 284-378 (415)
219 2vxn_A Triosephosphate isomera 95.9 0.016 5.6E-07 55.3 7.6 182 199-389 22-248 (251)
220 1jub_A Dihydroorotate dehydrog 95.9 0.014 4.8E-07 55.9 7.2 74 198-272 173-275 (311)
221 3zwt_A Dihydroorotate dehydrog 95.9 0.017 5.8E-07 57.8 8.0 74 198-272 235-331 (367)
222 3b0p_A TRNA-dihydrouridine syn 95.9 0.009 3.1E-07 59.0 6.0 77 198-276 145-233 (350)
223 3kru_A NADH:flavin oxidoreduct 95.9 0.057 1.9E-06 53.5 11.7 125 256-389 151-321 (343)
224 1y0e_A Putative N-acetylmannos 95.9 0.014 4.8E-07 52.9 6.8 76 198-275 128-211 (223)
225 1f76_A Dihydroorotate dehydrog 95.9 0.01 3.5E-07 57.7 6.2 75 198-273 226-323 (336)
226 2yc6_A Triosephosphate isomera 95.8 0.016 5.6E-07 55.6 7.3 180 199-388 21-249 (257)
227 3qja_A IGPS, indole-3-glycerol 95.8 0.043 1.5E-06 52.7 10.3 94 177-285 163-259 (272)
228 1vkf_A Glycerol uptake operon 95.8 0.11 3.9E-06 47.6 12.5 117 232-376 51-178 (188)
229 3lmz_A Putative sugar isomeras 95.8 0.3 1E-05 44.5 15.6 190 196-390 29-245 (257)
230 1vcv_A Probable deoxyribose-ph 95.8 0.093 3.2E-06 49.3 12.2 164 197-377 17-220 (226)
231 3nvt_A 3-deoxy-D-arabino-heptu 95.8 0.1 3.5E-06 52.6 13.2 165 198-377 157-348 (385)
232 2wqp_A Polysialic acid capsule 95.8 0.47 1.6E-05 47.3 17.9 183 176-378 19-237 (349)
233 2uv8_G Fatty acid synthase sub 95.8 0.044 1.5E-06 65.5 12.0 171 200-383 604-810 (2051)
234 2zbt_A Pyridoxal biosynthesis 95.8 0.026 8.8E-07 53.9 8.4 114 197-320 133-286 (297)
235 1yad_A Regulatory protein TENI 95.8 0.11 3.7E-06 47.2 12.2 105 252-378 33-140 (221)
236 1mzh_A Deoxyribose-phosphate a 95.8 0.019 6.5E-07 53.3 7.2 65 198-265 133-201 (225)
237 1aw2_A Triosephosphate isomera 95.8 0.034 1.2E-06 53.3 9.2 138 249-390 80-250 (256)
238 2btm_A TIM, protein (triosepho 95.7 0.052 1.8E-06 51.9 10.3 137 249-389 77-247 (252)
239 3hgj_A Chromate reductase; TIM 95.7 0.02 6.8E-07 56.5 7.5 90 198-290 240-338 (349)
240 2z6i_A Trans-2-enoyl-ACP reduc 95.6 0.026 8.9E-07 55.0 8.1 95 160-274 99-197 (332)
241 3ndo_A Deoxyribose-phosphate a 95.6 0.059 2E-06 50.9 10.1 158 198-371 30-215 (231)
242 3vzx_A Heptaprenylglyceryl pho 95.6 0.033 1.1E-06 52.5 8.3 60 224-285 165-226 (228)
243 1xm3_A Thiazole biosynthesis p 95.6 0.022 7.5E-07 54.1 7.2 69 201-272 138-211 (264)
244 3f4w_A Putative hexulose 6 pho 95.5 0.018 6.1E-07 51.8 6.0 73 198-274 115-193 (211)
245 3m9y_A Triosephosphate isomera 95.5 0.056 1.9E-06 51.7 9.6 159 226-388 43-250 (254)
246 2j27_A Triosephosphate isomera 95.5 0.062 2.1E-06 51.3 9.9 156 229-389 47-247 (250)
247 1wa3_A 2-keto-3-deoxy-6-phosph 95.5 0.12 4.1E-06 46.1 11.2 114 240-375 13-131 (205)
248 1tre_A Triosephosphate isomera 95.5 0.055 1.9E-06 51.8 9.4 138 249-390 78-248 (255)
249 3gka_A N-ethylmaleimide reduct 95.4 0.12 4.2E-06 51.5 12.2 122 255-390 168-331 (361)
250 4e38_A Keto-hydroxyglutarate-a 95.4 0.21 7.1E-06 47.1 12.9 155 213-393 10-170 (232)
251 1b9b_A TIM, protein (triosepho 95.3 0.0061 2.1E-07 58.5 2.1 158 229-390 47-252 (255)
252 4adt_A Pyridoxine biosynthetic 95.3 0.016 5.5E-07 56.5 5.0 88 225-321 194-287 (297)
253 1gvf_A Tagatose-bisphosphate a 95.2 0.57 2E-05 45.4 15.9 133 238-379 73-236 (286)
254 2e6f_A Dihydroorotate dehydrog 95.2 0.027 9.1E-07 54.1 6.4 74 198-272 175-277 (314)
255 1tv5_A Dhodehase, dihydroorota 95.1 0.027 9.4E-07 57.7 6.6 74 198-272 312-406 (443)
256 1viz_A PCRB protein homolog; s 95.0 0.036 1.2E-06 52.5 6.5 84 197-285 139-228 (240)
257 3oix_A Putative dihydroorotate 94.9 0.021 7.3E-07 56.6 5.0 77 193-270 200-306 (345)
258 4ef8_A Dihydroorotate dehydrog 94.9 0.032 1.1E-06 55.6 6.2 79 194-273 201-311 (354)
259 3n9r_A Fructose-bisphosphate a 94.9 0.71 2.4E-05 45.3 15.6 133 238-379 73-259 (307)
260 1vhn_A Putative flavin oxidore 94.9 0.042 1.4E-06 53.2 6.9 80 197-279 140-224 (318)
261 2nv1_A Pyridoxal biosynthesis 94.9 0.046 1.6E-06 52.6 7.1 114 197-320 133-286 (305)
262 2qjg_A Putative aldolase MJ040 94.9 0.062 2.1E-06 50.3 7.7 99 177-285 146-258 (273)
263 1ea0_A Glutamate synthase [NAD 94.8 0.093 3.2E-06 60.9 10.4 106 272-380 975-1098(1479)
264 2v82_A 2-dehydro-3-deoxy-6-pho 94.8 0.3 1E-05 43.8 11.9 101 253-374 24-127 (212)
265 2a4a_A Deoxyribose-phosphate a 94.8 0.082 2.8E-06 51.3 8.6 169 198-377 49-266 (281)
266 1z41_A YQJM, probable NADH-dep 94.8 0.051 1.8E-06 53.2 7.3 79 198-277 230-316 (338)
267 1geq_A Tryptophan synthase alp 94.8 0.057 1.9E-06 49.7 7.2 76 198-274 144-226 (248)
268 2f6u_A GGGPS, (S)-3-O-geranylg 94.8 0.055 1.9E-06 51.1 7.0 72 197-273 146-223 (234)
269 3kws_A Putative sugar isomeras 94.7 0.91 3.1E-05 41.8 15.3 190 196-390 37-275 (287)
270 3l5l_A Xenobiotic reductase A; 94.7 0.045 1.5E-06 54.3 6.7 89 198-289 247-344 (363)
271 3p6l_A Sugar phosphate isomera 94.7 1.2 4.2E-05 40.3 15.9 189 197-389 22-248 (262)
272 3cwo_X Beta/alpha-barrel prote 94.7 0.14 4.8E-06 45.2 9.2 94 197-291 130-227 (237)
273 1o94_A Tmadh, trimethylamine d 94.7 0.22 7.4E-06 53.4 12.3 126 256-390 157-336 (729)
274 3bw2_A 2-nitropropane dioxygen 94.6 0.06 2.1E-06 53.1 7.3 72 201-273 156-242 (369)
275 1vli_A Spore coat polysacchari 94.6 1.8 6.3E-05 43.6 18.1 183 176-378 28-249 (385)
276 3qze_A DHDPS, dihydrodipicolin 94.6 3.6 0.00012 39.9 19.8 167 200-383 47-235 (314)
277 3sgz_A Hydroxyacid oxidase 2; 94.6 0.098 3.3E-06 52.2 8.7 72 200-272 228-305 (352)
278 3aty_A Tcoye, prostaglandin F2 94.6 0.097 3.3E-06 52.4 8.7 44 346-390 307-351 (379)
279 1ofd_A Ferredoxin-dependent gl 94.6 0.1 3.6E-06 60.6 10.0 107 272-381 1010-1134(1520)
280 1ney_A TIM, triosephosphate is 94.5 0.07 2.4E-06 50.9 7.3 181 199-389 19-244 (247)
281 2vc6_A MOSA, dihydrodipicolina 94.5 2.4 8.3E-05 40.4 18.1 164 200-380 24-210 (292)
282 2isw_A Putative fructose-1,6-b 94.5 1.1 3.6E-05 44.4 15.6 132 238-378 74-258 (323)
283 1vs1_A 3-deoxy-7-phosphoheptul 94.4 0.26 8.9E-06 47.5 11.1 87 273-374 87-178 (276)
284 2gjl_A Hypothetical protein PA 94.4 0.081 2.8E-06 51.2 7.6 94 161-274 108-207 (328)
285 3qst_A Triosephosphate isomera 94.4 0.19 6.5E-06 48.1 10.0 180 199-387 23-247 (255)
286 2fiq_A Putative tagatose 6-pho 94.4 0.44 1.5E-05 48.6 13.2 138 238-381 75-287 (420)
287 3o07_A Pyridoxine biosynthesis 94.4 0.16 5.5E-06 49.4 9.5 88 224-320 184-277 (291)
288 1p0k_A Isopentenyl-diphosphate 94.4 0.064 2.2E-06 52.5 6.8 73 200-273 192-285 (349)
289 3tsm_A IGPS, indole-3-glycerol 94.4 0.16 5.4E-06 48.9 9.5 88 176-278 169-259 (272)
290 1gte_A Dihydropyrimidine dehyd 94.4 0.1 3.4E-06 58.3 9.1 75 198-273 716-821 (1025)
291 1vr6_A Phospho-2-dehydro-3-deo 94.3 0.27 9.2E-06 49.0 11.2 87 273-374 155-247 (350)
292 1vyr_A Pentaerythritol tetrani 94.3 0.087 3E-06 52.3 7.7 77 199-277 253-332 (364)
293 4gj1_A 1-(5-phosphoribosyl)-5- 94.3 0.15 5E-06 47.8 8.9 61 325-393 62-122 (243)
294 3th6_A Triosephosphate isomera 94.3 0.2 6.8E-06 47.8 9.8 151 227-381 45-238 (249)
295 3s5o_A 4-hydroxy-2-oxoglutarat 94.2 3.6 0.00012 39.6 18.9 166 200-381 38-227 (307)
296 3tfx_A Orotidine 5'-phosphate 94.2 0.32 1.1E-05 46.5 11.1 160 212-393 32-234 (259)
297 3w01_A Heptaprenylglyceryl pho 94.2 0.055 1.9E-06 51.2 5.6 68 210-281 159-228 (235)
298 1mdl_A Mandelate racemase; iso 94.2 0.17 5.7E-06 49.4 9.3 93 198-295 204-298 (359)
299 3ru6_A Orotidine 5'-phosphate 94.2 0.38 1.3E-05 47.1 11.7 162 211-393 50-248 (303)
300 2nzl_A Hydroxyacid oxidase 1; 94.2 0.1 3.5E-06 52.5 7.9 72 200-272 263-340 (392)
301 4dbe_A Orotidine 5'-phosphate 94.2 0.16 5.3E-06 47.3 8.6 173 198-393 14-205 (222)
302 3daq_A DHDPS, dihydrodipicolin 94.1 4.1 0.00014 38.9 20.5 165 201-382 27-214 (292)
303 2pgw_A Muconate cycloisomerase 94.1 0.19 6.5E-06 49.7 9.7 93 198-295 205-299 (384)
304 2r8w_A AGR_C_1641P; APC7498, d 94.1 4.5 0.00015 39.5 19.4 166 200-382 58-249 (332)
305 1gox_A (S)-2-hydroxy-acid oxid 94.1 0.14 4.8E-06 50.9 8.6 71 201-272 237-313 (370)
306 3bo9_A Putative nitroalkan dio 94.1 0.065 2.2E-06 52.3 6.1 94 160-273 113-210 (326)
307 3l5a_A NADH/flavin oxidoreduct 94.1 0.089 3E-06 53.4 7.2 49 346-395 318-366 (419)
308 2rdx_A Mandelate racemase/muco 94.0 0.26 9E-06 48.5 10.4 90 198-295 204-295 (379)
309 2v5j_A 2,4-dihydroxyhept-2-ENE 94.0 2 7E-05 41.2 16.4 169 198-377 49-260 (287)
310 3flu_A DHDPS, dihydrodipicolin 94.0 4.5 0.00015 38.7 20.0 166 200-382 31-218 (297)
311 1rd5_A Tryptophan synthase alp 93.9 0.15 5.1E-06 47.7 7.9 73 199-272 155-234 (262)
312 3kts_A Glycerol uptake operon 93.8 0.04 1.4E-06 50.7 3.7 63 202-270 119-181 (192)
313 4af0_A Inosine-5'-monophosphat 93.8 0.56 1.9E-05 49.4 12.7 117 198-316 281-413 (556)
314 3krs_A Triosephosphate isomera 93.8 0.4 1.4E-05 46.3 10.8 134 249-386 101-265 (271)
315 2ovl_A Putative racemase; stru 93.8 0.27 9.3E-06 48.3 10.0 101 198-305 206-308 (371)
316 3na8_A Putative dihydrodipicol 93.7 4.9 0.00017 38.9 18.6 166 200-382 48-236 (315)
317 2v5b_A Triosephosphate isomera 93.7 1.2 4.1E-05 42.2 13.8 177 198-388 21-240 (244)
318 2rfg_A Dihydrodipicolinate syn 93.6 5.2 0.00018 38.3 18.8 165 200-381 24-210 (297)
319 3gk0_A PNP synthase, pyridoxin 93.6 2.3 7.8E-05 41.1 15.7 175 196-380 52-248 (278)
320 2ftp_A Hydroxymethylglutaryl-C 93.6 3.1 0.00011 39.8 16.9 164 195-372 28-232 (302)
321 1xky_A Dihydrodipicolinate syn 93.6 4.6 0.00016 38.7 18.1 163 200-379 36-220 (301)
322 1p4c_A L(+)-mandelate dehydrog 93.5 0.1 3.6E-06 52.1 6.5 72 200-272 236-311 (380)
323 1vhc_A Putative KHG/KDPG aldol 93.5 1 3.5E-05 41.8 12.9 125 228-374 9-136 (224)
324 1vc4_A Indole-3-glycerol phosp 93.5 0.39 1.3E-05 45.4 10.1 82 297-388 66-147 (254)
325 4ab4_A Xenobiotic reductase B; 93.5 0.11 3.7E-06 51.9 6.5 44 346-390 279-323 (362)
326 2tps_A Protein (thiamin phosph 93.4 0.13 4.3E-06 46.5 6.4 85 198-285 125-221 (227)
327 1m5w_A Pyridoxal phosphate bio 93.4 2.3 7.9E-05 40.4 15.2 180 197-380 25-220 (243)
328 3ve9_A Orotidine-5'-phosphate 93.4 0.19 6.5E-06 46.6 7.7 170 199-393 13-198 (215)
329 3i4k_A Muconate lactonizing en 93.4 0.46 1.6E-05 47.1 11.0 119 163-295 183-303 (383)
330 3lab_A Putative KDPG (2-keto-3 93.4 0.66 2.3E-05 43.3 11.3 129 239-393 15-155 (217)
331 3l0g_A Nicotinate-nucleotide p 93.3 0.22 7.5E-06 48.8 8.2 134 160-317 133-280 (300)
332 1xi3_A Thiamine phosphate pyro 93.3 0.15 5E-06 45.4 6.5 85 198-285 117-211 (215)
333 2qgy_A Enolase from the enviro 93.3 0.3 1E-05 48.5 9.4 94 198-296 209-304 (391)
334 1rvk_A Isomerase/lactonizing e 93.2 0.38 1.3E-05 47.3 10.0 118 164-295 190-310 (382)
335 3si9_A DHDPS, dihydrodipicolin 93.2 6.5 0.00022 38.1 18.9 166 200-382 46-234 (315)
336 2ehh_A DHDPS, dihydrodipicolin 93.2 6.1 0.00021 37.7 19.1 165 200-381 24-211 (294)
337 3pm6_A Putative fructose-bisph 93.1 2.1 7.2E-05 42.0 14.9 134 238-379 81-255 (306)
338 1w8s_A FBP aldolase, fructose- 93.1 0.37 1.3E-05 45.7 9.4 100 177-285 139-248 (263)
339 2yw3_A 4-hydroxy-2-oxoglutarat 93.0 0.19 6.4E-06 46.0 6.9 82 198-285 113-195 (207)
340 2gou_A Oxidoreductase, FMN-bin 93.0 0.16 5.6E-06 50.4 7.0 76 198-277 251-331 (365)
341 4dwd_A Mandelate racemase/muco 92.9 0.38 1.3E-05 48.1 9.6 120 163-298 180-300 (393)
342 1p1x_A Deoxyribose-phosphate a 92.9 0.087 3E-06 50.5 4.7 123 252-377 89-239 (260)
343 3tr2_A Orotidine 5'-phosphate 92.9 2.3 8E-05 39.8 14.4 176 162-393 50-234 (239)
344 1nu5_A Chloromuconate cycloiso 92.9 0.37 1.3E-05 47.2 9.3 93 198-295 203-297 (370)
345 3qfe_A Putative dihydrodipicol 92.8 7.3 0.00025 37.7 18.9 167 200-382 35-227 (318)
346 3o63_A Probable thiamine-phosp 92.8 0.2 7E-06 47.2 7.0 75 197-273 143-224 (243)
347 3tak_A DHDPS, dihydrodipicolin 92.7 7 0.00024 37.2 20.5 166 200-382 25-212 (291)
348 3ozy_A Putative mandelate race 92.6 0.45 1.5E-05 47.3 9.6 117 164-294 185-304 (389)
349 1sjd_A N-acylamino acid racema 92.6 0.65 2.2E-05 45.4 10.7 120 162-296 171-292 (368)
350 3eb2_A Putative dihydrodipicol 92.6 3.3 0.00011 39.7 15.4 167 200-383 28-216 (300)
351 2h9a_B CO dehydrogenase/acetyl 92.5 2.1 7.1E-05 41.9 14.0 125 175-303 45-189 (310)
352 1o5k_A DHDPS, dihydrodipicolin 92.5 7.1 0.00024 37.5 17.7 165 200-381 36-226 (306)
353 2ojp_A DHDPS, dihydrodipicolin 92.5 6.1 0.00021 37.6 17.1 165 200-381 25-211 (292)
354 1qop_A Tryptophan synthase alp 92.4 0.3 1E-05 46.2 7.7 45 227-272 194-238 (268)
355 3vnd_A TSA, tryptophan synthas 92.4 0.35 1.2E-05 46.3 8.2 73 198-272 160-239 (267)
356 2r14_A Morphinone reductase; H 92.4 0.17 5.8E-06 50.5 6.2 79 198-278 256-338 (377)
357 2og9_A Mandelate racemase/muco 92.3 0.41 1.4E-05 47.5 8.9 96 198-300 222-319 (393)
358 2hsa_B 12-oxophytodienoate red 92.3 0.19 6.6E-06 50.6 6.6 44 346-390 319-363 (402)
359 2oz8_A MLL7089 protein; struct 92.2 1 3.6E-05 44.5 11.6 88 198-294 205-296 (389)
360 1wbh_A KHG/KDPG aldolase; lyas 92.1 1.7 5.7E-05 40.0 12.1 123 229-374 9-135 (214)
361 3vkj_A Isopentenyl-diphosphate 92.1 0.41 1.4E-05 47.8 8.6 72 200-272 201-300 (368)
362 3l21_A DHDPS, dihydrodipicolin 92.1 5.4 0.00019 38.3 16.3 161 200-379 39-221 (304)
363 3a5f_A Dihydrodipicolinate syn 92.1 6 0.00021 37.6 16.5 165 199-380 24-210 (291)
364 2hzg_A Mandelate racemase/muco 92.0 0.47 1.6E-05 47.2 8.9 92 198-294 210-304 (401)
365 2o55_A Putative glycerophospho 92.0 7 0.00024 36.0 16.5 127 176-316 108-244 (258)
366 2wkj_A N-acetylneuraminate lya 92.0 8.9 0.0003 36.8 17.6 162 200-379 35-219 (303)
367 3m5v_A DHDPS, dihydrodipicolin 92.0 8.9 0.0003 36.7 18.8 166 200-382 31-219 (301)
368 3tqv_A Nicotinate-nucleotide p 92.0 0.45 1.5E-05 46.3 8.4 134 159-316 123-270 (287)
369 2agk_A 1-(5-phosphoribosyl)-5- 92.0 0.2 6.8E-06 47.5 5.8 87 196-285 156-257 (260)
370 3ldv_A Orotidine 5'-phosphate 92.0 0.13 4.5E-06 49.1 4.5 166 212-393 54-252 (255)
371 1ydn_A Hydroxymethylglutaryl-C 91.9 2.8 9.6E-05 39.8 13.9 165 196-374 25-230 (295)
372 1o60_A 2-dehydro-3-deoxyphosph 91.9 0.85 2.9E-05 44.2 10.3 181 176-378 18-242 (292)
373 1rvg_A Fructose-1,6-bisphospha 91.8 2.3 7.8E-05 41.6 13.3 134 238-378 71-256 (305)
374 2nql_A AGR_PAT_674P, isomerase 91.8 0.23 8E-06 49.1 6.4 90 198-293 223-314 (388)
375 4ab4_A Xenobiotic reductase B; 91.7 0.16 5.4E-06 50.7 5.0 74 198-277 243-317 (362)
376 1o4u_A Type II quinolic acid p 91.7 0.47 1.6E-05 46.0 8.2 88 225-317 177-269 (285)
377 2yzr_A Pyridoxal biosynthesis 91.7 0.27 9.4E-06 48.7 6.6 85 227-320 229-319 (330)
378 3mqt_A Mandelate racemase/muco 91.7 0.34 1.2E-05 48.3 7.5 121 163-298 189-311 (394)
379 1chr_A Chloromuconate cycloiso 91.7 0.91 3.1E-05 44.6 10.4 119 163-295 177-297 (370)
380 2v9d_A YAGE; dihydrodipicolini 91.6 8.5 0.00029 37.7 17.4 168 199-380 54-244 (343)
381 2gl5_A Putative dehydratase pr 91.6 0.52 1.8E-05 46.8 8.7 92 198-294 233-326 (410)
382 3s6d_A Putative triosephosphat 91.6 0.032 1.1E-06 54.9 -0.2 135 249-393 131-307 (310)
383 1tkk_A Similar to chloromucona 91.6 0.67 2.3E-05 45.2 9.3 94 198-296 200-297 (366)
384 2qde_A Mandelate racemase/muco 91.5 0.53 1.8E-05 46.7 8.6 93 198-295 204-298 (397)
385 3gka_A N-ethylmaleimide reduct 91.5 0.19 6.4E-06 50.1 5.2 75 198-278 251-326 (361)
386 2o56_A Putative mandelate race 91.5 0.46 1.6E-05 47.2 8.1 107 176-294 215-323 (407)
387 3cny_A Inositol catabolism pro 91.4 6.3 0.00021 36.0 15.3 189 196-390 30-289 (301)
388 3fs2_A 2-dehydro-3-deoxyphosph 91.4 0.92 3.1E-05 44.3 9.9 85 275-374 99-188 (298)
389 2p8b_A Mandelate racemase/muco 91.4 0.4 1.4E-05 46.9 7.5 94 198-296 200-296 (369)
390 3e96_A Dihydrodipicolinate syn 91.3 5.9 0.0002 38.3 15.7 167 200-382 36-221 (316)
391 3gnn_A Nicotinate-nucleotide p 91.3 0.73 2.5E-05 45.0 9.2 135 160-318 135-283 (298)
392 2qkf_A 3-deoxy-D-manno-octulos 91.3 1.1 3.7E-05 43.1 10.3 182 176-379 15-240 (280)
393 1r0m_A N-acylamino acid racema 91.2 0.69 2.4E-05 45.4 9.0 119 162-296 178-298 (375)
394 3mkc_A Racemase; metabolic pro 91.1 0.52 1.8E-05 47.0 8.2 121 163-298 194-316 (394)
395 3my9_A Muconate cycloisomerase 91.1 0.69 2.4E-05 45.7 9.0 118 163-294 180-299 (377)
396 3sz8_A 2-dehydro-3-deoxyphosph 91.1 0.71 2.4E-05 44.8 8.7 86 274-374 77-167 (285)
397 3r4e_A Mandelate racemase/muco 91.0 0.45 1.5E-05 47.9 7.6 119 164-296 210-330 (418)
398 2ps2_A Putative mandelate race 91.0 0.56 1.9E-05 46.0 8.1 90 199-296 206-298 (371)
399 2poz_A Putative dehydratase; o 91.0 0.53 1.8E-05 46.6 8.0 93 198-295 214-308 (392)
400 3ajx_A 3-hexulose-6-phosphate 90.9 0.19 6.5E-06 44.8 4.3 82 198-282 115-200 (207)
401 1qpo_A Quinolinate acid phosph 90.9 1 3.4E-05 43.6 9.6 140 159-317 119-270 (284)
402 1tzz_A Hypothetical protein L1 90.9 0.6 2.1E-05 46.2 8.3 105 198-307 225-338 (392)
403 2ox4_A Putative mandelate race 90.8 0.34 1.2E-05 48.1 6.4 107 176-294 209-317 (403)
404 3stp_A Galactonate dehydratase 90.8 0.47 1.6E-05 47.8 7.5 128 163-304 219-348 (412)
405 3v3w_A Starvation sensing prot 90.8 0.53 1.8E-05 47.5 7.9 119 164-296 216-336 (424)
406 1ujp_A Tryptophan synthase alp 90.8 0.62 2.1E-05 44.5 8.0 56 227-285 191-250 (271)
407 3kru_A NADH:flavin oxidoreduct 90.8 0.22 7.4E-06 49.2 4.9 78 198-277 231-316 (343)
408 3jva_A Dipeptide epimerase; en 90.8 0.59 2E-05 45.8 8.0 118 163-297 172-294 (354)
409 1f6k_A N-acetylneuraminate lya 90.7 12 0.0004 35.7 18.3 160 200-377 27-209 (293)
410 2vws_A YFAU, 2-keto-3-deoxy su 90.7 6.3 0.00022 37.1 14.9 169 198-377 28-239 (267)
411 3qc0_A Sugar isomerase; TIM ba 90.7 2.8 9.5E-05 37.8 12.0 194 196-392 17-268 (275)
412 3dg3_A Muconate cycloisomerase 90.6 0.59 2E-05 46.0 7.9 93 198-295 200-293 (367)
413 3sz8_A 2-dehydro-3-deoxyphosph 90.6 2.8 9.7E-05 40.6 12.4 140 226-379 79-245 (285)
414 2zds_A Putative DNA-binding pr 90.5 7 0.00024 36.4 15.0 134 254-390 117-309 (340)
415 3d0c_A Dihydrodipicolinate syn 90.5 13 0.00044 35.9 17.4 164 199-380 35-219 (314)
416 2zad_A Muconate cycloisomerase 90.5 1.1 3.8E-05 43.4 9.6 93 198-296 197-293 (345)
417 4e5t_A Mandelate racemase / mu 90.5 0.79 2.7E-05 45.8 8.8 91 198-293 223-315 (404)
418 3txv_A Probable tagatose 6-pho 90.5 4.2 0.00014 41.9 14.2 172 201-380 36-294 (450)
419 3nav_A Tryptophan synthase alp 90.5 0.53 1.8E-05 45.2 7.2 44 228-272 198-241 (271)
420 3rr1_A GALD, putative D-galact 90.5 0.67 2.3E-05 46.5 8.3 93 198-295 193-287 (405)
421 2hk0_A D-psicose 3-epimerase; 90.4 5.9 0.0002 36.8 14.3 181 197-380 37-268 (309)
422 3aty_A Tcoye, prostaglandin F2 90.3 0.5 1.7E-05 47.2 7.1 75 198-277 267-345 (379)
423 2gdq_A YITF; mandelate racemas 90.3 0.67 2.3E-05 45.8 8.0 91 199-294 200-293 (382)
424 3i6e_A Muconate cycloisomerase 90.3 1.1 3.7E-05 44.5 9.5 117 163-294 182-300 (385)
425 3qvq_A Phosphodiesterase OLEI0 90.2 10 0.00035 35.0 15.6 136 162-317 99-239 (252)
426 3paj_A Nicotinate-nucleotide p 90.2 1 3.4E-05 44.5 9.0 134 160-317 157-304 (320)
427 3cpr_A Dihydrodipicolinate syn 90.2 13 0.00046 35.5 19.6 165 199-382 39-225 (304)
428 3h5d_A DHDPS, dihydrodipicolin 90.2 14 0.00047 35.7 17.7 162 198-377 29-213 (311)
429 1ps9_A 2,4-dienoyl-COA reducta 90.2 0.5 1.7E-05 49.9 7.4 162 198-376 229-404 (671)
430 3q45_A Mandelate racemase/muco 90.2 0.93 3.2E-05 44.6 8.9 120 163-296 173-294 (368)
431 3obe_A Sugar phosphate isomera 90.1 7 0.00024 36.8 14.7 135 253-390 119-293 (305)
432 2hmc_A AGR_L_411P, dihydrodipi 90.1 15 0.0005 36.1 17.4 164 199-379 49-236 (344)
433 3bjs_A Mandelate racemase/muco 90.1 0.64 2.2E-05 46.8 7.8 92 198-294 244-338 (428)
434 3ddm_A Putative mandelate race 90.1 1 3.5E-05 44.9 9.1 119 163-297 188-309 (392)
435 4e4u_A Mandalate racemase/muco 90.0 0.95 3.2E-05 45.5 8.9 91 198-293 216-308 (412)
436 2pp0_A L-talarate/galactarate 90.0 0.56 1.9E-05 46.7 7.2 97 198-301 235-333 (398)
437 3toy_A Mandelate racemase/muco 89.9 0.81 2.8E-05 45.5 8.3 124 163-302 202-327 (383)
438 1h1y_A D-ribulose-5-phosphate 89.9 0.41 1.4E-05 43.9 5.6 72 201-274 127-207 (228)
439 2ffc_A Orotidine 5-monophospha 89.8 0.22 7.4E-06 49.8 4.0 152 230-393 154-342 (353)
440 3sjn_A Mandelate racemase/muco 89.7 0.6 2.1E-05 46.1 7.1 92 198-294 209-302 (374)
441 1dxe_A 2-dehydro-3-deoxy-galac 89.7 6.7 0.00023 36.6 14.0 169 198-377 29-239 (256)
442 3dip_A Enolase; structural gen 89.7 1.7 6E-05 43.5 10.6 118 163-294 202-322 (410)
443 3ngj_A Deoxyribose-phosphate a 89.7 0.69 2.4E-05 43.8 7.1 113 202-317 100-230 (239)
444 4djd_D C/Fe-SP, corrinoid/iron 89.6 2.7 9.2E-05 41.4 11.6 159 175-338 52-235 (323)
445 2pz0_A Glycerophosphoryl diest 89.6 8.5 0.00029 35.4 14.6 135 162-316 101-239 (252)
446 3tj4_A Mandelate racemase; eno 89.6 0.9 3.1E-05 44.8 8.3 114 163-293 186-304 (372)
447 3vcn_A Mannonate dehydratase; 89.5 0.51 1.8E-05 47.6 6.6 119 163-295 216-336 (425)
448 3glc_A Aldolase LSRF; TIM barr 89.5 1.2 4.3E-05 43.1 9.0 95 177-285 172-274 (295)
449 3eez_A Putative mandelate race 89.5 0.73 2.5E-05 45.6 7.5 91 198-296 204-296 (378)
450 2q02_A Putative cytoplasmic pr 89.5 6.2 0.00021 35.5 13.3 191 197-390 19-265 (272)
451 3mwc_A Mandelate racemase/muco 89.5 1.2 3.9E-05 44.6 9.0 119 162-295 193-313 (400)
452 3sbf_A Mandelate racemase / mu 89.4 0.64 2.2E-05 46.4 7.1 118 164-295 191-310 (401)
453 2b7n_A Probable nicotinate-nuc 89.3 1.4 4.9E-05 42.0 9.1 138 160-317 107-258 (273)
454 3dgb_A Muconate cycloisomerase 88.9 1.2 4.2E-05 44.0 8.7 119 163-295 183-303 (382)
455 2hsa_B 12-oxophytodienoate red 88.9 0.29 1E-05 49.3 4.2 78 198-277 261-357 (402)
456 3fcp_A L-Ala-D/L-Glu epimerase 88.9 1.5 5.2E-05 43.3 9.3 119 163-295 182-302 (381)
457 3u0h_A Xylose isomerase domain 88.9 1.7 5.8E-05 39.4 9.0 196 195-391 14-268 (281)
458 3rcy_A Mandelate racemase/muco 88.7 0.82 2.8E-05 46.3 7.4 118 163-294 192-311 (433)
459 2qq6_A Mandelate racemase/muco 88.7 0.85 2.9E-05 45.4 7.4 118 164-295 200-319 (410)
460 3ugv_A Enolase; enzyme functio 88.6 0.81 2.8E-05 45.6 7.2 124 163-302 208-333 (390)
461 3gd6_A Muconate cycloisomerase 88.5 1.2 4.1E-05 44.3 8.3 91 198-295 202-296 (391)
462 2yxg_A DHDPS, dihydrodipicolin 88.4 17 0.00059 34.4 19.3 162 200-380 24-208 (289)
463 2i1o_A Nicotinate phosphoribos 88.3 1.1 3.8E-05 45.2 8.0 100 277-381 197-304 (398)
464 3ro6_B Putative chloromuconate 88.3 0.41 1.4E-05 47.0 4.7 120 163-296 173-295 (356)
465 1nvm_A HOA, 4-hydroxy-2-oxoval 88.3 4.9 0.00017 39.2 12.4 168 196-372 29-223 (345)
466 3kxq_A Triosephosphate isomera 88.2 1.7 5.9E-05 41.9 8.9 175 198-388 42-269 (275)
467 3hzh_A Chemotaxis response reg 88.1 5.7 0.00019 32.6 11.1 97 277-388 49-148 (157)
468 1o60_A 2-dehydro-3-deoxyphosph 88.1 1.4 4.8E-05 42.7 8.3 86 274-374 75-166 (292)
469 3fs2_A 2-dehydro-3-deoxyphosph 88.1 2.9 0.0001 40.7 10.5 138 226-379 100-264 (298)
470 3tml_A 2-dehydro-3-deoxyphosph 88.0 1.1 3.6E-05 43.6 7.3 81 274-369 74-159 (288)
471 1icp_A OPR1, 12-oxophytodienoa 87.9 0.25 8.7E-06 49.2 3.0 76 199-277 258-339 (376)
472 3inp_A D-ribulose-phosphate 3- 87.9 0.68 2.3E-05 43.8 5.8 114 197-316 96-223 (246)
473 3r0u_A Enzyme of enolase super 87.9 1.9 6.6E-05 42.7 9.4 120 163-296 175-298 (379)
474 3cqj_A L-ribulose-5-phosphate 87.9 11 0.00038 34.5 14.1 195 195-390 28-277 (295)
475 3dx5_A Uncharacterized protein 87.9 3.7 0.00013 37.5 10.7 120 197-316 15-170 (286)
476 3luf_A Two-component system re 87.8 16 0.00054 33.3 16.4 148 226-389 63-237 (259)
477 4dxk_A Mandelate racemase / mu 87.8 1.8 6.1E-05 43.2 9.1 92 198-294 225-318 (400)
478 1mxs_A KDPG aldolase; 2-keto-3 87.7 1.6 5.6E-05 40.4 8.2 80 197-286 127-217 (225)
479 1vd6_A Glycerophosphoryl diest 87.7 4.6 0.00016 36.6 11.1 119 175-316 93-214 (224)
480 2ze3_A DFA0005; organic waste 87.6 11 0.00038 36.0 14.2 164 202-382 28-239 (275)
481 1v5x_A PRA isomerase, phosphor 87.5 16 0.00055 33.2 14.7 178 194-392 6-193 (203)
482 2pcq_A Putative dihydrodipicol 87.5 18 0.00062 34.2 15.6 161 200-382 22-202 (283)
483 3l23_A Sugar phosphate isomera 87.5 7.3 0.00025 36.5 12.8 134 254-390 114-291 (303)
484 2qdd_A Mandelate racemase/muco 87.5 2 6.8E-05 42.2 9.1 69 226-295 225-295 (378)
485 3to5_A CHEY homolog; alpha(5)b 87.5 7.4 0.00025 32.7 11.6 100 276-388 23-124 (134)
486 1tx2_A DHPS, dihydropteroate s 87.4 22 0.00074 34.4 16.9 137 218-385 49-214 (297)
487 1tqj_A Ribulose-phosphate 3-ep 87.2 0.13 4.4E-06 47.7 0.3 74 210-285 134-218 (230)
488 2zc8_A N-acylamino acid racema 87.2 1.4 4.6E-05 43.1 7.7 119 162-296 171-291 (369)
489 3iwp_A Copper homeostasis prot 87.2 3.9 0.00013 39.7 10.7 131 250-393 48-204 (287)
490 1tmy_A CHEY protein, TMY; chem 87.1 8.6 0.00029 29.4 11.1 97 277-388 15-112 (120)
491 1vfs_A Alanine racemase; TIM-b 87.0 19 0.00064 35.2 15.8 165 197-381 44-232 (386)
492 3ble_A Citramalate synthase fr 87.0 4.9 0.00017 39.2 11.6 129 196-337 40-207 (337)
493 3ceu_A Thiamine phosphate pyro 86.9 0.66 2.3E-05 42.0 4.9 100 252-378 17-117 (210)
494 2qkf_A 3-deoxy-D-manno-octulos 86.9 1.5 5.2E-05 42.1 7.7 86 274-374 72-163 (280)
495 1tqx_A D-ribulose-5-phosphate 86.8 1.2 4E-05 41.6 6.7 74 199-274 126-207 (227)
496 3noy_A 4-hydroxy-3-methylbut-2 86.8 1.9 6.5E-05 43.2 8.5 94 196-294 45-139 (366)
497 3ks6_A Glycerophosphoryl diest 86.8 19 0.00065 33.1 17.9 136 162-316 87-232 (250)
498 3lua_A Response regulator rece 86.7 10 0.00036 30.0 12.1 108 277-393 17-126 (140)
499 1ub3_A Aldolase protein; schif 86.6 2.6 8.8E-05 39.1 8.8 114 201-316 75-205 (220)
500 3go2_A Putative L-alanine-DL-g 86.6 1.7 5.8E-05 43.5 8.2 116 163-297 202-319 (409)
No 1
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=100.00 E-value=1.3e-73 Score=553.85 Aligned_cols=267 Identities=41% Similarity=0.652 Sum_probs=251.0
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHhcCChHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCH
Q 015899 120 GNTPRNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP 199 (398)
Q Consensus 120 ~~~p~~iLe~Iv~~K~~ev~~~k~~~pl~~l~~~~~~~~~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp 199 (398)
++.+++||++|+++|++||+++|+.+|+.+|+..+...+++++|.++|++... .++++|||||||+|||||+|++++||
T Consensus 3 ~~m~~~iL~~I~~~k~~ev~~~~~~~~~~~l~~~~~~~~~~~~f~~al~~~~~-~~~~~vIaE~KraSPSkG~i~~~~dp 81 (272)
T 3tsm_A 3 GSMSTDILRKIEAYKREEIAAAKARLALDELKARTRDQSAPRGFLKALEAKRA-AGQFALIAEIKKASPSKGLIRPDFDP 81 (272)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCCHHHHHHHHHH-TTCCEEEEEECSEETTTEESCSSCCH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCCCHHHHHhhccc-cCCceEEEEeccCCCCCCccCCCCCH
Confidence 34456899999999999999999999999999999888999999999986532 36789999999999999999999999
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHH
Q 015899 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRY 279 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~ 279 (398)
+++|+.|+++||+|||||||+.||+|+++||..||++ +++||||||||+|+|||++|+.+|||+||||++.|+++++++
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~-v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~ 160 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQA-CSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAKE 160 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHT-SSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHh-cCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHHHHHH
Confidence 9999999999999999999999999999999999997 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHH
Q 015899 280 MTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPD 359 (398)
Q Consensus 280 Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~e 359 (398)
|++.|+++||++||||||.+|+++|+++ |+++||||||||+||++|++++.+|++.+ |.++++|+||||+|++
T Consensus 161 l~~~a~~lGl~~lvevh~~eEl~~A~~~-ga~iIGinnr~l~t~~~dl~~~~~L~~~i------p~~~~vIaesGI~t~e 233 (272)
T 3tsm_A 161 LEDTAFALGMDALIEVHDEAEMERALKL-SSRLLGVNNRNLRSFEVNLAVSERLAKMA------PSDRLLVGESGIFTHE 233 (272)
T ss_dssp HHHHHHHTTCEEEEEECSHHHHHHHTTS-CCSEEEEECBCTTTCCBCTHHHHHHHHHS------CTTSEEEEESSCCSHH
T ss_pred HHHHHHHcCCeEEEEeCCHHHHHHHHhc-CCCEEEECCCCCccCCCChHHHHHHHHhC------CCCCcEEEECCCCCHH
Confidence 9999999999999999999999999998 99999999999999999999999999873 4578999999999999
Q ss_pred HHHHHHHcCCCEEEEcccccCCCChHHHHHhhhcCc
Q 015899 360 DIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFGKD 395 (398)
Q Consensus 360 D~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~~~ 395 (398)
|+.++.++|+||||||++||+++||++++++|+..+
T Consensus 234 dv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~~g~ 269 (272)
T 3tsm_A 234 DCLRLEKSGIGTFLIGESLMRQHDVAAATRALLTGA 269 (272)
T ss_dssp HHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHHHC-
T ss_pred HHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHHhcc
Confidence 999999999999999999999999999999998754
No 2
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=100.00 E-value=5.2e-71 Score=529.81 Aligned_cols=241 Identities=31% Similarity=0.470 Sum_probs=216.4
Q ss_pred ccHHHHHHHHHHHHHHHHHhcCChHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHH
Q 015899 124 RNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIA 203 (398)
Q Consensus 124 ~~iLe~Iv~~K~~ev~~~k~~~pl~~l~~~~~~~~~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA 203 (398)
+.+|++|++.+.++. .. . .....|.++|.++|..... .++++|||||||+|||+|.|+ +||.++|
T Consensus 6 ~g~L~div~~~~~~~-----~~--~-----~~~~~p~~~~~~~l~~~~~-~~~~~iIAEiKraSPSkg~i~--~dp~~iA 70 (258)
T 4a29_A 6 KGWLEDVVQLSLRRP-----SV--R-----ASRQRPIISLNERILEFNK-RNITAIIAVYERKSPSGLDVE--RDPIEYA 70 (258)
T ss_dssp CHHHHHHHHHHHTCC-----CC--C-----CCCSSCCCCHHHHHHHHHH-TTCCCEEEEECSBCTTSCBCC--CCHHHHH
T ss_pred HHHHHHHHHHHHhCh-----HH--H-----HhhcCCccCHHHHHHHHhh-CCCcEEEEEEecCCCCCCCcc--CCHHHHH
Confidence 568899887654321 11 0 1123577899999976543 467899999999999999994 6899999
Q ss_pred HHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHH
Q 015899 204 RSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKI 283 (398)
Q Consensus 204 ~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~ 283 (398)
+.| ++||+|||||||++||+||++||..+|++ +++||||||||+||||||||+.+|||+||||+++|++++|++|+++
T Consensus 71 ~~~-~~GA~aiSVLTd~~~F~Gs~~~L~~vr~~-v~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~L~~~~l~~l~~~ 148 (258)
T 4a29_A 71 KFM-ERYAVGLSITTEEKYFNGSYETLRKIASS-VSIPILMSDFIVKESQIDDAYNLGADTVLLIVKILTERELESLLEY 148 (258)
T ss_dssp HHH-TTTCSEEEEECCSTTTCCCHHHHHHHHTT-CSSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHHH
T ss_pred HHH-hCCCeEEEEeCCCCCCCCCHHHHHHHHHh-cCCCEeeccccccHHHHHHHHHcCCCeeehHHhhcCHHHHHHHHHH
Confidence 866 58999999999999999999999999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHH
Q 015899 284 CKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAY 363 (398)
Q Consensus 284 a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~ 363 (398)
|+++||++||||||.+|+++|+.+ |+++||||||||+||++|++++.+|++.+ |.++++||||||+|++|+.+
T Consensus 149 A~~lGl~~LvEVh~~~El~rAl~~-~a~iIGINNRnL~tf~vdl~~t~~L~~~i------p~~~~~VsESGI~t~~dv~~ 221 (258)
T 4a29_A 149 ARSYGMEPLILINDENDLDIALRI-GARFIGIMSRDFETGEINKENQRKLISMI------PSNVVKVAKLGISERNEIEE 221 (258)
T ss_dssp HHHTTCCCEEEESSHHHHHHHHHT-TCSEEEECSBCTTTCCBCHHHHHHHHTTS------CTTSEEEEEESSCCHHHHHH
T ss_pred HHHHhHHHHHhcchHHHHHHHhcC-CCcEEEEeCCCccccccCHHHHHHHHhhC------CCCCEEEEcCCCCCHHHHHH
Confidence 999999999999999999999998 99999999999999999999999999873 57899999999999999999
Q ss_pred HHHcCCCEEEEcccccCCCChHHHH
Q 015899 364 VQEAGVKAVLVGESIVKQDDPGKGI 388 (398)
Q Consensus 364 l~~~GadaVLVGeaLmk~~dp~~~i 388 (398)
+.++|+|||||||+||+++||.+.+
T Consensus 222 l~~~G~~a~LVGealmr~~d~~~~L 246 (258)
T 4a29_A 222 LRKLGVNAFLISSSLMRNPEKIKEL 246 (258)
T ss_dssp HHHTTCCEEEECHHHHHCTTHHHHH
T ss_pred HHHCCCCEEEECHHHhCCCcHHHHH
Confidence 9999999999999999999975433
No 3
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=100.00 E-value=2.4e-69 Score=518.67 Aligned_cols=248 Identities=33% Similarity=0.507 Sum_probs=236.1
Q ss_pred cHHHHHHHHHHHHHHHHHhcCChHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHH
Q 015899 125 NILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIAR 204 (398)
Q Consensus 125 ~iLe~Iv~~K~~ev~~~k~~~pl~~l~~~~~~~~~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ 204 (398)
|||++|+++|+.||+++|+.+|+. + +++++|.++|++. ++++|||||||+|||+|.|+++++|.++|+
T Consensus 1 ~iL~~I~~~k~~ev~~~~~~~~~~---~-----~~~~~f~~al~~~----~~~~vIaE~K~aSPSkG~i~~~~~~~~iA~ 68 (251)
T 1i4n_A 1 RRLWEIVEAKKKDILEIDGENLIV---Q-----RRNHRFLEVLSGK----ERVKIIAEFKKASPSAGDINADASLEDFIR 68 (251)
T ss_dssp CCHHHHHHHHHHHGGGCCGGGCCC---C-----CCCCHHHHHHCCS----SSCEEEEEECSBCSSSCBSCTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhhCCCc---C-----CCCcCHHHHHhhC----CCceEEEeecCCCCCCCccCCCCCHHHHHH
Confidence 689999999999999999999987 1 5789999999853 458999999999999999999999999999
Q ss_pred HHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHH
Q 015899 205 SYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKIC 284 (398)
Q Consensus 205 aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a 284 (398)
+|+++ |+|||||||++||+||++||..||++ |++||||||||+|+|||++|+.+|||+||||++.|++++|++|+++|
T Consensus 69 ~y~~~-A~~IsVlTd~~~F~gs~~dL~~ir~~-v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a 146 (251)
T 1i4n_A 69 MYDEL-ADAISILTEKHYFKGDPAFVRAARNL-TCRPILAKDFYIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAA 146 (251)
T ss_dssp HHHHH-CSEEEEECCCSSSCCCTHHHHHHHTT-CCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHH
T ss_pred HHHHh-CCceEEEecccccCCCHHHHHHHHHh-CCCCEEEeeCCCCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHH
Confidence 99999 99999999999999999999999997 99999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHH
Q 015899 285 KLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYV 364 (398)
Q Consensus 285 ~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l 364 (398)
+++||++||||||.+|+++|+++.|+++||||||||+||++|++++.+|++.+ |.++++|+||||+|++|++++
T Consensus 147 ~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~i------p~~~~vIaEsGI~t~edv~~~ 220 (251)
T 1i4n_A 147 EELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLV------PDDTVVVAESGIKDPRELKDL 220 (251)
T ss_dssp HTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBCTTTCCBCTTHHHHHGGGS------CTTSEEEEESCCCCGGGHHHH
T ss_pred HHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCcccccCCCCHHHHHHHHHhC------CCCCEEEEeCCCCCHHHHHHH
Confidence 99999999999999999999995489999999999999999999999999873 467899999999999999999
Q ss_pred HHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 365 QEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 365 ~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
.++ +||||||++||+++||++++++|+.
T Consensus 221 ~~~-a~avLVG~aimr~~d~~~~~~~l~~ 248 (251)
T 1i4n_A 221 RGK-VNAVLVGTSIMKAENPRRFLEEMRA 248 (251)
T ss_dssp TTT-CSEEEECHHHHHCSSHHHHHHHHHH
T ss_pred HHh-CCEEEEcHHHcCCcCHHHHHHHHHh
Confidence 999 9999999999999999999999975
No 4
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=100.00 E-value=3.8e-69 Score=554.08 Aligned_cols=254 Identities=37% Similarity=0.623 Sum_probs=242.7
Q ss_pred ccHHHHHHHHHHHHHHHHHhcCChHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHH
Q 015899 124 RNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIA 203 (398)
Q Consensus 124 ~~iLe~Iv~~K~~ev~~~k~~~pl~~l~~~~~~~~~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA 203 (398)
.+||++|+++|++||+++|+.+|+.+|+..+. +++|+|.++|++ ++++|||||||+|||||+|+++++|.++|
T Consensus 2 ~~iL~~I~~~k~~ev~~~~~~~~~~~l~~~~~--~~~r~f~~al~~-----~~~~vIaEvKraSPSkG~i~~~~~~~~iA 74 (452)
T 1pii_A 2 QTVLAKIVADKAIWVEARKQQQPLASFQNEVQ--PSTRHFYDALQG-----ARTAFILECKKASPSKGVIRDDFDPARIA 74 (452)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSCGGGTGGGCC--CCCSCHHHHHCS-----SSCEEEEEECSEETTTEESCSSCCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhcCCHHHHHhhcc--cCCCCHHHHHhc-----CCCceEEEecCCCCCCCccCCCCCHHHHH
Confidence 37999999999999999999999999987653 678999999974 24899999999999999999999999999
Q ss_pred HHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHH
Q 015899 204 RSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKI 283 (398)
Q Consensus 204 ~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~ 283 (398)
++|+++ |+|||||||++||+||++||..||++ |++||||||||+|+|||++|+.+|||+||||+++|++++|++|+++
T Consensus 75 ~~y~~~-A~~IsvLTd~~~F~gs~~dL~~vr~~-v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~ 152 (452)
T 1pii_A 75 AIYKHY-ASAISVLTDEKYFQGSFNFLPIVSQI-APQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAV 152 (452)
T ss_dssp HHHTTT-CSEEEEECCSTTTCCCTTHHHHHHHH-CCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTTCCHHHHHHHHHH
T ss_pred HHHHhh-CcEEEEEecccccCCCHHHHHHHHHh-cCCCeEEEeccCCHHHHHHHHHcCCCEEEEEcccCCHHHHHHHHHH
Confidence 999999 99999999999999999999999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHH
Q 015899 284 CKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAY 363 (398)
Q Consensus 284 a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~ 363 (398)
|+++||++||||||.+|+++|+++ |+++||||||||+||++|++++.+|++.+ |.++++|+||||+||+|+++
T Consensus 153 a~~lgm~~LvEvh~~eE~~~A~~l-ga~iIGinnr~L~t~~~dl~~~~~L~~~i------p~~~~vIaEsGI~t~edv~~ 225 (452)
T 1pii_A 153 AHSLEMGVLTEVSNEEEQERAIAL-GAKVVGINNRDLRDLSIDLNRTRELAPKL------GHNVTVISESGINTYAQVRE 225 (452)
T ss_dssp HHHTTCEEEEEECSHHHHHHHHHT-TCSEEEEESEETTTTEECTHHHHHHHHHH------CTTSEEEEESCCCCHHHHHH
T ss_pred HHHcCCeEEEEeCCHHHHHHHHHC-CCCEEEEeCCCCCCCCCCHHHHHHHHHhC------CCCCeEEEECCCCCHHHHHH
Confidence 999999999999999999999998 99999999999999999999999999873 45789999999999999999
Q ss_pred HHHcCCCEEEEcccccCCCChHHHHHhhhcC
Q 015899 364 VQEAGVKAVLVGESIVKQDDPGKGITGLFGK 394 (398)
Q Consensus 364 l~~~GadaVLVGeaLmk~~dp~~~i~~L~~~ 394 (398)
+.++ +|||||||+||+++||++++++|+..
T Consensus 226 ~~~~-a~avLVGealmr~~d~~~~~~~l~~~ 255 (452)
T 1pii_A 226 LSHF-ANGFLIGSALMAHDDLHAAVRRVLLG 255 (452)
T ss_dssp HTTT-CSEEEECHHHHTCSCHHHHHHHHHHC
T ss_pred HHHh-CCEEEEcHHHcCCcCHHHHHHHHHHH
Confidence 9999 99999999999999999999999853
No 5
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=100.00 E-value=7.4e-68 Score=513.08 Aligned_cols=259 Identities=39% Similarity=0.596 Sum_probs=235.2
Q ss_pred cccHHHHHHHHHHHHHHHHHhcCChHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHH
Q 015899 123 PRNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEI 202 (398)
Q Consensus 123 p~~iLe~Iv~~K~~ev~~~k~~~pl~~l~~~~~~~~~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~i 202 (398)
|||||++|+++|++||+++|+.+|+++|++.+...+++++|.++|++. .++|||||||+|||||+|++++||.++
T Consensus 3 ~~~il~~i~~~k~~~v~~~~~~~~~~~l~~~~~~~~~~~~f~~al~~~-----~~~~IaE~K~asPs~g~i~~~~~p~~~ 77 (272)
T 3qja_A 3 PATVLDSILEGVRADVAAREASVSLSEIKAAAAAAPPPLDVMAALREP-----GIGVIAEVKRASPSAGALATIADPAKL 77 (272)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHSCCCCCHHHHHTSS-----SCEEEEEEC-------------CHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHhhCCHHHHHHHHhhCCCCCCHHHHHhcC-----CCeEEEEEecCCCCCCccCCCCCHHHH
Confidence 689999999999999999999999999999998889999999999752 389999999999999999999999999
Q ss_pred HHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHH
Q 015899 203 ARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTK 282 (398)
Q Consensus 203 A~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~ 282 (398)
|++|+++||+|||||||++||+|++++|+.||+. +++||||||||+|+|||++|+++|||+|+||++.|+++++.++++
T Consensus 78 A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~-v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~ 156 (272)
T 3qja_A 78 AQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRAS-VSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLD 156 (272)
T ss_dssp HHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHh-CCCCEEECccccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHH
Confidence 9999999999999999999999999999999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHH
Q 015899 283 ICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIA 362 (398)
Q Consensus 283 ~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~ 362 (398)
.|+++||++|+||||.+|+++|+++ |+++|||||||+++|.+|++.+.+|.+.+ |.++++|+||||+|++|+.
T Consensus 157 ~a~~lGl~~lvev~t~ee~~~A~~~-Gad~IGv~~r~l~~~~~dl~~~~~l~~~v------~~~~pvVaegGI~t~edv~ 229 (272)
T 3qja_A 157 RTESLGMTALVEVHTEQEADRALKA-GAKVIGVNARDLMTLDVDRDCFARIAPGL------PSSVIRIAESGVRGTADLL 229 (272)
T ss_dssp HHHHTTCEEEEEESSHHHHHHHHHH-TCSEEEEESBCTTTCCBCTTHHHHHGGGS------CTTSEEEEESCCCSHHHHH
T ss_pred HHHHCCCcEEEEcCCHHHHHHHHHC-CCCEEEECCCcccccccCHHHHHHHHHhC------cccCEEEEECCCCCHHHHH
Confidence 9999999999999999999999998 99999999999999999999999998762 4478999999999999999
Q ss_pred HHHHcCCCEEEEcccccCCCChHHHHHhhhcC
Q 015899 363 YVQEAGVKAVLVGESIVKQDDPGKGITGLFGK 394 (398)
Q Consensus 363 ~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~~ 394 (398)
++.++|+|||+||++||+++||.+++++|++.
T Consensus 230 ~l~~~GadgvlVGsal~~a~dp~~~~~~l~~~ 261 (272)
T 3qja_A 230 AYAGAGADAVLVGEGLVTSGDPRAAVADLVTA 261 (272)
T ss_dssp HHHHTTCSEEEECHHHHTCSCHHHHHHHHHTT
T ss_pred HHHHcCCCEEEEcHHHhCCCCHHHHHHHHHhh
Confidence 99999999999999999999999999999863
No 6
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=100.00 E-value=5.5e-63 Score=474.17 Aligned_cols=247 Identities=38% Similarity=0.547 Sum_probs=231.3
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHhcCChHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCH
Q 015899 120 GNTPRNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP 199 (398)
Q Consensus 120 ~~~p~~iLe~Iv~~K~~ev~~~k~~~pl~~l~~~~~~~~~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp 199 (398)
.+.+.+||++|+++|++||+++|+ . ..|++++|.++|+.. +++|||||||+|||||+|++ +||
T Consensus 5 ~~~~~~~l~~i~~~k~~~v~~~~~----------~-~~~~~~~~~~al~~~-----~~~~IaE~k~aSPskg~i~~-~~p 67 (254)
T 1vc4_A 5 LSRVPGVLGEIARKRASEVAPYPL----------P-EPPSVPSFKEALLRP-----GLSVIAEVKRQSPSEGLIRE-VDP 67 (254)
T ss_dssp CTTCCHHHHHHHHHHHHTCCCCCC----------C-CCCCCCCHHHHHTSS-----SCEEEEEECSCCTTTCCCCS-CCH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHh----------c-cCCCccCHHHHHhhc-----CCcEEeeecCCCcCCCcCCC-CCH
Confidence 344568999999999999987665 1 347789999999842 37999999999999999999 999
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHH
Q 015899 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRY 279 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~ 279 (398)
.++|+.|+++||+|||||||++||+|+++||..||+. +++||++||||+|+|||++|+++|||+|+|+++.|+ +++++
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~-v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~-~~l~~ 145 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREA-VDLPLLRKDFVVDPFMLEEARAFGASAALLIVALLG-ELTGA 145 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHH-CCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHG-GGHHH
T ss_pred HHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHh-cCCCEEECCcCCCHHHHHHHHHcCCCEEEECccchH-HHHHH
Confidence 9999999999999999999999999999999999997 999999999999999999999999999999999999 89999
Q ss_pred HHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccC---CceEEEecCCC
Q 015899 280 MTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQK---NIIVVGESGLF 356 (398)
Q Consensus 280 Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~---~v~vVAESGI~ 356 (398)
+++.++.+||+++|||||.+|+++++++ |+++||+|||+++||.+|++++.+|++.+ |. ++++||||||+
T Consensus 146 l~~~a~~lGl~~lvev~~~~E~~~a~~~-gad~IGvn~~~l~~~~~dl~~~~~L~~~i------~~~~~~~~vIAegGI~ 218 (254)
T 1vc4_A 146 YLEEARRLGLEALVEVHTERELEIALEA-GAEVLGINNRDLATLHINLETAPRLGRLA------RKRGFGGVLVAESGYS 218 (254)
T ss_dssp HHHHHHHHTCEEEEEECSHHHHHHHHHH-TCSEEEEESBCTTTCCBCTTHHHHHHHHH------HHTTCCSEEEEESCCC
T ss_pred HHHHHHHCCCeEEEEECCHHHHHHHHHc-CCCEEEEccccCcCCCCCHHHHHHHHHhC------ccccCCCeEEEEcCCC
Confidence 9999999999999999999999999998 99999999999999999999999998863 33 68999999999
Q ss_pred CHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 357 TPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 357 t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
|++|+.++.+ |+|||+||++||+++||.+++++|++
T Consensus 219 s~~dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l~~ 254 (254)
T 1vc4_A 219 RKEELKALEG-LFDAVLIGTSLMRAPDLEAALRELVG 254 (254)
T ss_dssp SHHHHHTTTT-TCSEEEECHHHHTSSCHHHHHHHHHC
T ss_pred CHHHHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHHhC
Confidence 9999999999 99999999999999999999999974
No 7
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=100.00 E-value=8.3e-33 Score=261.33 Aligned_cols=194 Identities=22% Similarity=0.259 Sum_probs=169.2
Q ss_pred eEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE---ecc-----ccC
Q 015899 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL---CKE-----FIV 249 (398)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL---~KD-----FIi 249 (398)
++|+.| ..|..+-++.++++.++|++|+++||.+||+ |++++|+.||+. +++||+ +|| |++
T Consensus 19 ~livsc--q~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~--------~~~~~i~~ir~~-v~~Pvig~~k~~~~~~~~~I 87 (229)
T 3q58_A 19 GLIVSC--QPVPGSPMDKPEIVAAMAQAAASAGAVAVRI--------EGIENLRTVRPH-LSVPIIGIIKRDLTGSPVRI 87 (229)
T ss_dssp CEEEEC--CCCTTSTTCSHHHHHHHHHHHHHTTCSEEEE--------ESHHHHHHHGGG-CCSCEEEECBCCCSSCCCCB
T ss_pred CEEEEE--eCCCCCCCCCcchHHHHHHHHHHCCCcEEEE--------CCHHHHHHHHHh-cCCCEEEEEeecCCCCceEe
Confidence 466666 3355566888999999999999999999999 799999999997 999998 666 677
Q ss_pred CHH--HHHHHHHcCcCEEEEeccCC-ChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcc----
Q 015899 250 DAW--QIYYARTKGADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLET---- 322 (398)
Q Consensus 250 d~~--QI~eAr~~GADaVLLiaaiL-~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~t---- 322 (398)
+++ |+++++++|||.|+|+++.+ +++.+.++++.++++|+.++++|||.+|++++.++ |+++||+|++++++
T Consensus 88 ~~~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~-Gad~Ig~~~~g~t~~~~~ 166 (229)
T 3q58_A 88 TPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCSTVNEGISCHQK-GIEFIGTTLSGYTGPITP 166 (229)
T ss_dssp SCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT-TCSEEECTTTTSSSSCCC
T ss_pred CccHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecCCHHHHHHHHhC-CCCEEEecCccCCCCCcC
Confidence 776 89999999999999999975 56689999999999999999999999999999997 99999999998864
Q ss_pred cccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015899 323 FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 392 (398)
Q Consensus 323 f~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 392 (398)
+.+|++...++.+ . ++++|++|||+|++|+.++.++|||||+||++||++.++.+.+.+.+
T Consensus 167 ~~~~~~li~~l~~--------~-~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~p~~~~~~f~~~~ 227 (229)
T 3q58_A 167 VEPDLAMVTQLSH--------A-GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRIEHICQWFSHAV 227 (229)
T ss_dssp SSCCHHHHHHHHT--------T-TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHH--------c-CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcChHHHHHHHHHHH
Confidence 4566666666543 2 68999999999999999999999999999999999888887777654
No 8
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=100.00 E-value=3e-32 Score=257.77 Aligned_cols=195 Identities=18% Similarity=0.189 Sum_probs=169.0
Q ss_pred eEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE---ecc-----ccC
Q 015899 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL---CKE-----FIV 249 (398)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL---~KD-----FIi 249 (398)
++|+.| ..+..+-|+.++++.++|++|+++||.+||+ |++++|+.||+. +++||+ +|| |++
T Consensus 19 ~livsc--q~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~--------~~~~~i~~ir~~-v~~Pvig~~k~d~~~~~~~I 87 (232)
T 3igs_A 19 GLIVSC--QPVPGSPLDKPEIVAAMALAAEQAGAVAVRI--------EGIDNLRMTRSL-VSVPIIGIIKRDLDESPVRI 87 (232)
T ss_dssp CEEEEC--CCCTTCTTCSHHHHHHHHHHHHHTTCSEEEE--------ESHHHHHHHHTT-CCSCEEEECBCCCSSCCCCB
T ss_pred CEEEEE--eCCCCCCCCCcchHHHHHHHHHHCCCeEEEE--------CCHHHHHHHHHh-cCCCEEEEEeecCCCcceEe
Confidence 466666 3455566888999999999999999999999 789999999997 999998 666 677
Q ss_pred CHH--HHHHHHHcCcCEEEEeccCC-ChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcc----
Q 015899 250 DAW--QIYYARTKGADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLET---- 322 (398)
Q Consensus 250 d~~--QI~eAr~~GADaVLLiaaiL-~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~t---- 322 (398)
+++ |+++++++|||.|+|+++.+ +++.+.++++.++++|+.++++|||.+|++++.++ |+++||+|++++++
T Consensus 88 ~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~-Gad~Ig~~~~g~t~~~~~ 166 (232)
T 3igs_A 88 TPFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCSSVDDGLACQRL-GADIIGTTMSGYTTPDTP 166 (232)
T ss_dssp SCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECCSHHHHHHHHHT-TCSEEECTTTTSSSSSCC
T ss_pred CccHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHhC-CCCEEEEcCccCCCCCCC
Confidence 776 89999999999999999975 56679999999999999999999999999999997 99999999998864
Q ss_pred cccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 323 FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 323 f~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
+.+|++...++.+ . ++++|++|||+|++|+.++.++|||||+||++||++.++.+.+.+.+.
T Consensus 167 ~~~~~~~i~~l~~--------~-~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~p~~~~~~~~~~i~ 228 (232)
T 3igs_A 167 EEPDLPLVKALHD--------A-GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITRLEHICGWYNDALK 228 (232)
T ss_dssp SSCCHHHHHHHHH--------T-TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHh--------c-CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcCHHHHHHHHHHHHH
Confidence 4566666666543 2 689999999999999999999999999999999997777777766553
No 9
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=8.4e-33 Score=273.23 Aligned_cols=195 Identities=23% Similarity=0.271 Sum_probs=161.0
Q ss_pred CCCCCCCCHHHHHHHHHHcCCcEEEEe----ccCCcCCC-----CHHHHHHHHhcCCCCcEEecccc--CCHHHHHHHHH
Q 015899 191 GILREDFDPVEIARSYEKGGAACLSIL----TDEKYFKG-----SFENLEAVRSAGVKCPLLCKEFI--VDAWQIYYART 259 (398)
Q Consensus 191 G~i~~~~dp~~iA~aY~~~GA~aISVL----Td~~~F~G-----s~edL~~Ir~a~v~lPVL~KDFI--id~~QI~eAr~ 259 (398)
|+|. ++++.++|+.|+++||+|||+| ||.+||+| ++++++.|+++ |++||++|+|| +++||++++
T Consensus 19 GvI~-d~~~~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~arm~~p~~i~~I~~a-v~iPV~~K~rig~~~e~qilea-- 94 (330)
T 2yzr_A 19 GVVM-DVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDA-VSIPVMAKCRIGHTTEALVLEA-- 94 (330)
T ss_dssp SEEE-EESSHHHHHHHHHHTCSEEEECSSCHHHHC--CCCCCCCCHHHHHHHHHH-CSSCEEEEEETTCHHHHHHHHH--
T ss_pred Ccee-eCCHHHHHHHHHHcCCCEEEecCCccccccCCcchhhcCCHHHHHHHHHh-cCCCeEEEEeecchHHHHHHHH--
Confidence 4555 6678999999999999999999 89999999 99999999998 99999999999 999999999
Q ss_pred cCcCEEEEeccCCChHH--------------------HHHHHHHHH----------HcCCcEEEEc--C-----------
Q 015899 260 KGADAVLLIAAVLPDLD--------------------IRYMTKICK----------LLGLTALVEV--H----------- 296 (398)
Q Consensus 260 ~GADaVLLiaaiL~~~~--------------------L~~Li~~a~----------~LGL~~LVEV--h----------- 296 (398)
+|||+|+ ++..|++.+ |.+.++.+. +.|+..|||+ |
T Consensus 95 ~GaD~Id-~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~ 173 (330)
T 2yzr_A 95 IGVDMID-ESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQL 173 (330)
T ss_dssp TTCSEEE-EETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEe-hhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHHhcCcceeeccCCCCcccchhHHHHHHHHHHHHHHh
Confidence 9999997 888887544 444444443 2359999999 7
Q ss_pred ---CHHHHHH-HhccCCCcE----------EeeccccCcccccChh--------hHHHHhhhhcccccccCCceEEEecC
Q 015899 297 ---DEREMDR-VLGIEGIEL----------IGINNRNLETFEVDNS--------NTKKLLEGERGEIIRQKNIIVVGESG 354 (398)
Q Consensus 297 ---t~eEl~r-Al~l~Ga~i----------IGINnRdL~tf~vDl~--------~t~~L~~~i~~~~i~~~~v~vVAESG 354 (398)
|.+|+.+ |.+. |+++ +|+|||||.+|.++.. .+.++++.++... .-.+++|++||
T Consensus 174 s~~~~~El~~~A~~~-gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~--~IPVV~VAeGG 250 (330)
T 2yzr_A 174 QRMTDEEVYGVAKFY-ANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLG--RLPVVNFAAGG 250 (330)
T ss_dssp TTSCHHHHHHHHHHH-HGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHT--SCSSEEEECSC
T ss_pred ccCCHHHHHHHHHHc-CCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhC--CCCeEEEEECC
Confidence 8999966 7886 9999 9999999999999873 3336666543211 01234489999
Q ss_pred CCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 355 LFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 355 I~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
|+||+|+.+++++|||||+||++||+++||.+++++|..
T Consensus 251 I~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ 289 (330)
T 2yzr_A 251 VATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVE 289 (330)
T ss_dssp CCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999998864
No 10
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=99.97 E-value=8e-32 Score=264.06 Aligned_cols=191 Identities=20% Similarity=0.209 Sum_probs=150.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCcEEEEe----ccCCcCCC-----CHHHHHHHHhcCCCCcEEecccc--CCHHHHHHH
Q 015899 189 SRGILREDFDPVEIARSYEKGGAACLSIL----TDEKYFKG-----SFENLEAVRSAGVKCPLLCKEFI--VDAWQIYYA 257 (398)
Q Consensus 189 SkG~i~~~~dp~~iA~aY~~~GA~aISVL----Td~~~F~G-----s~edL~~Ir~a~v~lPVL~KDFI--id~~QI~eA 257 (398)
+||-+..++++.++|+.|+++||+||||| ||..||+| ++++|+.||++ +++||++|+++ +++||+++
T Consensus 20 ~kggv~~d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~-v~iPvl~k~~i~~ide~qil~- 97 (297)
T 4adt_A 20 LKGGVIMDVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKC-ISINVLAKVRIGHFVEAQILE- 97 (297)
T ss_dssp TTTCEEEEESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTT-CCSEEEEEEETTCHHHHHHHH-
T ss_pred hcCCcccCCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHh-cCCCEEEeccCCcHHHHHHHH-
Confidence 34555557788899999999999999999 79999999 99999999997 99999987322 88999988
Q ss_pred HHcCcCEEEEeccCCChHHHHHHHHHHHH--cCCcEEEEcCCHHHHHHHhccCCCcEEeeccc-----------------
Q 015899 258 RTKGADAVLLIAAVLPDLDIRYMTKICKL--LGLTALVEVHDEREMDRVLGIEGIELIGINNR----------------- 318 (398)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~--LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnR----------------- 318 (398)
++|||+| ..+..++. .++++.++. +|+.+++||||.+|+.+++.+ |+++||+|+|
T Consensus 98 -aaGAD~I-d~s~~~~~---~~li~~i~~~~~g~~vvv~v~~~~Ea~~a~~~-Gad~I~v~g~~gTG~~~~~v~h~~~~~ 171 (297)
T 4adt_A 98 -ELKVDML-DESEVLTM---ADEYNHINKHKFKTPFVCGCTNLGEALRRISE-GASMIRTKGEAGTGNIIEAIKHIRTVN 171 (297)
T ss_dssp -HTTCSEE-EEETTSCC---SCSSCCCCGGGCSSCEEEEESSHHHHHHHHHH-TCSEEEECCCTTSCCCHHHHHHHHHHH
T ss_pred -HcCCCEE-EcCCCCCH---HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhC-CCCEEEECCCcCCCchHHHHHHHHHhh
Confidence 4999999 33444444 344555555 799999999999999999997 9999999987
Q ss_pred ------------cCccc----ccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 319 ------------NLETF----EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 319 ------------dL~tf----~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
+|.|| .+|++...++.+.+ +-.+++|++|||+|++|+.++.++|||+|+||++||+++
T Consensus 172 ~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~------~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~ 245 (297)
T 4adt_A 172 NEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLK------RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESE 245 (297)
T ss_dssp HHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHT------SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSS
T ss_pred hhhhhhccccccccccccccCCCCHHHHHHHHHhc------CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCC
Confidence 23444 34455444544431 224566799999999999999999999999999999999
Q ss_pred ChHHHHHhhhc
Q 015899 383 DPGKGITGLFG 393 (398)
Q Consensus 383 dp~~~i~~L~~ 393 (398)
||.+++++|..
T Consensus 246 dp~~~~~~l~~ 256 (297)
T 4adt_A 246 NPQKMASSIVM 256 (297)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999998864
No 11
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=99.95 E-value=1.2e-27 Score=226.17 Aligned_cols=182 Identities=20% Similarity=0.258 Sum_probs=161.1
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHH---------HHHHHHcCcCEEEEe
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQ---------IYYARTKGADAVLLI 268 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~Q---------I~eAr~~GADaVLLi 268 (398)
...++++...+.... -.-+.||.|++.+|..+++. +++||++|| +|+|| +++++.+|||+|||+
T Consensus 23 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~L~~v~~~-~~i~v~aQd--v~~~~~Ga~TGeis~~~l~~~Ga~~Vllg 95 (225)
T 1hg3_A 23 RALEIAKAAEKVYKE----TGVTIVVAPQLVDLRMIAES-VEIPVFAQH--IDPIKPGSHTGHVLPEAVKEAGAVGTLLN 95 (225)
T ss_dssp HHHHHHHHHHHHHHT----TCCEEEEECCHHHHHHHHHS-CSSCBEESC--CCSCCSBSCTTCCCHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHhhccc----cCCcEEEeCCHHHHHHHHHh-cCCceeeee--CCcccCCCccCcccHHHHHHcCCCEEEEC
Confidence 345566665442111 01245899999999999997 899999999 89999 999999999999999
Q ss_pred ccC--CChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCc-------ccccC-hhhHHHHhhhhc
Q 015899 269 AAV--LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLE-------TFEVD-NSNTKKLLEGER 338 (398)
Q Consensus 269 aai--L~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~-------tf~vD-l~~t~~L~~~i~ 338 (398)
++. +...++.++++.|.++||+++||||+.+|.+++..+ ++.+||+|||++. |+++| ++.+.++++.+
T Consensus 96 hseRR~~~~e~~~k~~~A~~~GL~~ivcVge~~e~~~~~~~-~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~- 173 (225)
T 1hg3_A 96 HSENRMILADLEAAIRRAEEVGLMTMVCSNNPAVSAAVAAL-NPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKV- 173 (225)
T ss_dssp CGGGCCBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT-CCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHH-
T ss_pred cchhcCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcC-CCCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhc-
Confidence 998 777789999999999999999999999999999987 8899999999997 99999 99999998863
Q ss_pred ccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 339 GEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 339 ~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
+.++.++++|||++++|+..+...|+||+|||+++|+++|+.+.+++|+.
T Consensus 174 -----~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~~~~~~i~~l~~ 223 (225)
T 1hg3_A 174 -----NPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKAKDPEKAIWDLVS 223 (225)
T ss_dssp -----CTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTCSSHHHHHHHHHH
T ss_pred -----cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCcCHHHHHHHHHh
Confidence 35789999999999999999999999999999999999999999999874
No 12
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=99.95 E-value=1.4e-27 Score=225.95 Aligned_cols=182 Identities=22% Similarity=0.280 Sum_probs=160.9
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHH---------HHHHHHcCcCEEEEe
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQ---------IYYARTKGADAVLLI 268 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~Q---------I~eAr~~GADaVLLi 268 (398)
...++++.+.+.... -.-+.||.|++.+|..+++. +++||++|| +|+|| +++++.+|||+|||+
T Consensus 20 ~~~~~~~~~~~~~~~----~~~~~~~~p~~~~L~~v~~~-~~i~v~aQd--v~~~~~Ga~TGeis~~~l~~~Ga~~Vllg 92 (226)
T 1w0m_A 20 RAVELAKAAERAARE----LGVNIVVAPNHLELGLVSQS-VDIPVYAQG--ADVEAGGAHTAHVSLENIKEAGGSGVILN 92 (226)
T ss_dssp HHHHHHHHHHHHHHH----HTCEEEEECCGGGHHHHHTT-CSSCBEESC--CSBSSCSSCTTCCBHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHhcccc----cCCcEEEeCCHHHHHHHHHh-cCCceEeeE--CChhhCCCccCCCCHHHHHHcCCCEEEEe
Confidence 345566666542111 01245899999999999987 899999999 89999 999999999999999
Q ss_pred ccC--CChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCc-------ccccC-hhhHHHHhhhhc
Q 015899 269 AAV--LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLE-------TFEVD-NSNTKKLLEGER 338 (398)
Q Consensus 269 aai--L~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~-------tf~vD-l~~t~~L~~~i~ 338 (398)
++. +...++.++++.|.++||+++||||+.+|.+.+..+ ++.+||+|||++. |+++| ++.+.++++.+
T Consensus 93 hseRR~~~~e~~~k~~~A~~~GL~~ivcVge~~e~~~~~~~-~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~- 170 (226)
T 1w0m_A 93 HSEAPLKLNDLARLVAKAKSLGLDVVVCAPDPRTSLAAAAL-GPHAVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRH- 170 (226)
T ss_dssp CTTSCCBHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-CCSEEEECCGGGTTTSCCHHHHCHHHHHHHHHHHHHH-
T ss_pred eeeccCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcC-CCCEEEEcChhhhccCCCCCCCChhHHHHHHHHHHhc-
Confidence 998 777789999999999999999999999999999987 8899999999997 99999 99999998863
Q ss_pred ccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 339 GEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 339 ~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
+.++.++++|||++.+|+..+...|+||+|||+++|+++|+.+.+++|+.
T Consensus 171 -----~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a~~~~~~i~~l~~ 220 (226)
T 1w0m_A 171 -----FPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKDPYAKIVELAK 220 (226)
T ss_dssp -----CTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTCSSHHHHHHHHHH
T ss_pred -----cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCCcCHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999875
No 13
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=99.93 E-value=5.5e-26 Score=212.74 Aligned_cols=164 Identities=18% Similarity=0.280 Sum_probs=145.0
Q ss_pred CCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHH---------HHHHHHcCcCEEEEecc--CCChHHHHHHHHHHHHcC
Q 015899 220 EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQ---------IYYARTKGADAVLLIAA--VLPDLDIRYMTKICKLLG 288 (398)
Q Consensus 220 ~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~Q---------I~eAr~~GADaVLLiaa--iL~~~~L~~Li~~a~~LG 288 (398)
+.||.|++.+|..+|+. +++||++|| ++++| +++++++|||+|+|+++ .++..++.++++.|+++|
T Consensus 35 ~~~~~~~~~~l~~v~~~-~~~~v~aqd--~~~~~~ga~tGei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~G 111 (219)
T 2h6r_A 35 TIGVAPQFVDLRMIVEN-VNIPVYAQH--IDNINPGSHTGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLG 111 (219)
T ss_dssp CEEEECCTTTHHHHHHH-CCSCBEESC--CCSCCSBSCTTCCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHT
T ss_pred cEEEECCHHHHHHHHHH-cCCcEEEEE--CChhhcCCccCchHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCC
Confidence 56899999999999997 899999999 68888 99999999999999998 788888999999999999
Q ss_pred CcEEEEcCCHHHHHHHhccCCCcEEeeccccC-------cccccC-hhhHHHHhhhhcccccccCCceEEEecCCCCHHH
Q 015899 289 LTALVEVHDEREMDRVLGIEGIELIGINNRNL-------ETFEVD-NSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDD 360 (398)
Q Consensus 289 L~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL-------~tf~vD-l~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD 360 (398)
|++++|||+.+|.+++..+ ++.+||+|++++ +|+.+| ++.+.++++.+ +.+++++++|||+++++
T Consensus 112 l~~iv~v~~~~e~~~~~~~-~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~------~~~~~ii~ggGI~~~~~ 184 (219)
T 2h6r_A 112 LETIVCTNNINTSKAVAAL-SPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEI------NKDVKVLCGAGISKGED 184 (219)
T ss_dssp CEEEEEESSSHHHHHHTTT-CCSEEEECCCC--------------CSHHHHHHHHHH------CTTCEEEECSSCCSHHH
T ss_pred CeEEEEeCCchHHHHHHhC-CCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhc------cCCCeEEEEeCcCcHHH
Confidence 9999999999999999998 899999999998 888888 88888887763 24689999999999999
Q ss_pred HHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 361 IAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 361 ~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
++.+.+.|+||||||+++|+++||.+.+++|..
T Consensus 185 ~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l~~ 217 (219)
T 2h6r_A 185 VKAALDLGAEGVLLASGVVKAKNVEEAIRELIK 217 (219)
T ss_dssp HHHHHTTTCCCEEESHHHHTCSSHHHHHHHHCC
T ss_pred HHHHhhCCCCEEEEcHHHhCcccHHHHHHHHHH
Confidence 999999999999999999999999999999864
No 14
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.92 E-value=6.5e-26 Score=219.46 Aligned_cols=184 Identities=23% Similarity=0.247 Sum_probs=153.9
Q ss_pred CHHHHHHHHHHcCCcEEEEe----ccCCcCCC-----CHHHHHHHHhcCCCCcEEeccccCC--HHHHHHHHHcCcCEEE
Q 015899 198 DPVEIARSYEKGGAACLSIL----TDEKYFKG-----SFENLEAVRSAGVKCPLLCKEFIVD--AWQIYYARTKGADAVL 266 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVL----Td~~~F~G-----s~edL~~Ir~a~v~lPVL~KDFIid--~~QI~eAr~~GADaVL 266 (398)
...++|+.|+++||.++++| ||..+|+| ++++++.|+++ |++||+.|++|-+ +.|+.++ +|||.|
T Consensus 19 ~~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~a-VsIPVm~k~righ~~EAqilea--~GaD~I- 94 (291)
T 3o07_A 19 VTPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNS-VSIPVMAKVRIGHFVEAQIIEA--LEVDYI- 94 (291)
T ss_dssp SSHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTT-CSSCEEEEEETTCHHHHHHHHH--TTCSEE-
T ss_pred CCHHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHh-CCCCeEEEEecCcHHHHHHHHH--cCCCEE-
Confidence 45689999999999999999 99999998 59999999997 9999999999999 8888888 999998
Q ss_pred EeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeec------------------------------
Q 015899 267 LIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGIN------------------------------ 316 (398)
Q Consensus 267 LiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGIN------------------------------ 316 (398)
--+..|++.++.+.++. +.++...+++++|++|+.++++. ||++||++
T Consensus 95 Desevltpad~~~~I~k-~~f~vpfv~~~~~l~EAlrri~e-GA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t 172 (291)
T 3o07_A 95 DESEVLTPADWTHHIEK-DKFKVPFVCGAKDLGEALRRINE-GAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKS 172 (291)
T ss_dssp EEETTSCCSCSSCCCCG-GGCSSCEEEEESSHHHHHHHHHH-TCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCC
T ss_pred ecccCCCHHHHHHHhhh-hcCCCcEEeeCCCHHHHHHHHHC-CCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCC
Confidence 44567888777666654 56899999999999999999996 99999984
Q ss_pred cccCccc----ccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015899 317 NRNLETF----EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 392 (398)
Q Consensus 317 nRdL~tf----~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 392 (398)
++++.+| ..|++...++.+.. .-.++.|++|||+||+|+.+++++|||||+||+++++++||.+..+.|.
T Consensus 173 ~~el~~~a~~~~ad~elI~~Ike~~------~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Akafv 246 (291)
T 3o07_A 173 EDDIAKVAEEMRVPVSLLKDVLEKG------KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATAVV 246 (291)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHT------SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHH
T ss_pred HHHhhhcccccCCCHHHHHHHHHcc------CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHHHHH
Confidence 3344444 45566555554431 1134557899999999999999999999999999999999999888876
Q ss_pred c
Q 015899 393 G 393 (398)
Q Consensus 393 ~ 393 (398)
.
T Consensus 247 ~ 247 (291)
T 3o07_A 247 E 247 (291)
T ss_dssp H
T ss_pred H
Confidence 3
No 15
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.88 E-value=4.2e-22 Score=188.21 Aligned_cols=194 Identities=15% Similarity=0.079 Sum_probs=143.7
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCC---HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEE
Q 015899 190 RGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGS---FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVL 266 (398)
Q Consensus 190 kG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs---~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVL 266 (398)
.|....+.++.++|+.|+++||++|++.+-...+.|. ++.++.+++. +++||+.+++|.++.|+.+++.+|||+|+
T Consensus 23 ~g~~~~~~~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~-~~iPvi~~ggi~~~~~i~~~~~~Gad~v~ 101 (266)
T 2w6r_A 23 SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADKAL 101 (266)
T ss_dssp TTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGG-CCSCEEEESCCCSTHHHHHHHHHTCSEEE
T ss_pred CCeeccCCCHHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCCcHhh
Confidence 3444456789999999999999999994433234444 8999999987 89999999999999999999999999999
Q ss_pred EeccCC----ChHHHHHHHHHHH--H----cCCcE-------EEEcCC--------HHH-HHHHhccCCCcEEeecc--c
Q 015899 267 LIAAVL----PDLDIRYMTKICK--L----LGLTA-------LVEVHD--------ERE-MDRVLGIEGIELIGINN--R 318 (398)
Q Consensus 267 LiaaiL----~~~~L~~Li~~a~--~----LGL~~-------LVEVht--------~eE-l~rAl~l~Ga~iIGINn--R 318 (398)
++...+ +++.+.++.+.+. . +++++ .|++|+ ..| ++++.++ |+..|.+|+ |
T Consensus 102 lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~-G~~~i~~t~~~~ 180 (266)
T 2w6r_A 102 AASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKR-GAGEILLTSIDR 180 (266)
T ss_dssp CCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHT-TCSEEEEEETTT
T ss_pred hhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHc-CCCEEEEEeecC
Confidence 999998 4455666655544 2 56666 577765 344 5778887 999999975 6
Q ss_pred cCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 319 NLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 319 dL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
+.....+|++...++.+. .++++|++|||++++|+.+++++||+||+||++||+.+++.+.+.+++.
T Consensus 181 ~g~~~g~~~~~i~~l~~~--------~~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~~~~~~~~~~~l~ 247 (266)
T 2w6r_A 181 DGTKSGYDTEMIRFVRPL--------TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDMRELKEYLK 247 (266)
T ss_dssp TTTCSCCCHHHHHHHGGG--------CCSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC--------------
T ss_pred CCCcCCCCHHHHHHHHHH--------cCCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcCCCCHHHHHHHHH
Confidence 677778898888888764 3689999999999999999999999999999999999976666655543
No 16
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.88 E-value=5.4e-23 Score=200.34 Aligned_cols=188 Identities=24% Similarity=0.295 Sum_probs=149.2
Q ss_pred CCCCCCCCHHHHHHHHHHcCCcEEEEec----cCCcCCC-----CHHHHHHHHhcCCCCcEEecccc--CCHHHHHHHHH
Q 015899 191 GILREDFDPVEIARSYEKGGAACLSILT----DEKYFKG-----SFENLEAVRSAGVKCPLLCKEFI--VDAWQIYYART 259 (398)
Q Consensus 191 G~i~~~~dp~~iA~aY~~~GA~aISVLT----d~~~F~G-----s~edL~~Ir~a~v~lPVL~KDFI--id~~QI~eAr~ 259 (398)
|+|. +.+|.++|+.|+++||++|++|+ +.++|+| +++.+..+++. +++||++|+++ ++++|++++
T Consensus 23 g~i~-~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~-~~iPv~~k~r~g~~~~~~~~~a-- 98 (305)
T 2nv1_A 23 GVIM-DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA-VSIPVMAKARIGHIVEARVLEA-- 98 (305)
T ss_dssp CEEE-EESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH-CSSCEEEEECTTCHHHHHHHHH--
T ss_pred Ceee-cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh-CCCCEEecccccchHHHHHHHH--
Confidence 4444 55888999999999999999997 7889999 89999999987 89999999998 566666555
Q ss_pred cCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeec-----------------------
Q 015899 260 KGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGIN----------------------- 316 (398)
Q Consensus 260 ~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGIN----------------------- 316 (398)
+|||+|+ +...+++.++.++++ ++.+|+.++++++|.+|+.++++. |+++|++.
T Consensus 99 ~GAd~V~-~~~~l~~~~~~~~i~-~~~~g~~v~~~~~~~~e~~~a~~~-Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~ 175 (305)
T 2nv1_A 99 MGVDYID-ESEVLTPADEEFHLN-KNEYTVPFVCGCRDLGEATRRIAE-GASMLRTKGEPGTGNIVEAVRHMRKVNAQVR 175 (305)
T ss_dssp HTCSEEE-ECTTSCCSCSSCCCC-GGGCSSCEEEEESSHHHHHHHHHT-TCSEEEECCCTTSCCTHHHHHHHHHHHHHHH
T ss_pred CCCCEEE-EeccCCHHHHHHHHH-HhccCCcEEEEeCCHHHHHHHHHC-CCCEEEeccccCccchHHHHhhhhhhhccch
Confidence 9999997 777777777777777 778999999999999999999986 99998873
Q ss_pred ------cccCccc----ccChhhHHHHhhhhcccccccCCceEE--EecCCCCHHHHHHHHHcCCCEEEEcccccCCCCh
Q 015899 317 ------NRNLETF----EVDNSNTKKLLEGERGEIIRQKNIIVV--GESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDP 384 (398)
Q Consensus 317 ------nRdL~tf----~vDl~~t~~L~~~i~~~~i~~~~v~vV--AESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp 384 (398)
++++.+| ..+++...++.+. .+++++ +.|||.|++|+.++.++||++|+||++|++.+||
T Consensus 176 ~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~--------~~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~p 247 (305)
T 2nv1_A 176 KVVAMSEDELMTEAKNLGAPYELLLQIKKD--------GKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNP 247 (305)
T ss_dssp HHHHSCGGGHHHHHHHHTCCHHHHHHHHHH--------TSCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCH
T ss_pred hhccccchhhhcccccccccHHHHHHHHHh--------cCCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCCH
Confidence 3343333 2344444444332 134444 9999999999999999999999999999999999
Q ss_pred HHHHHhhhc
Q 015899 385 GKGITGLFG 393 (398)
Q Consensus 385 ~~~i~~L~~ 393 (398)
...+++|..
T Consensus 248 ~~~~~~l~~ 256 (305)
T 2nv1_A 248 AKFAKAIVE 256 (305)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888877753
No 17
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.87 E-value=8.8e-21 Score=177.63 Aligned_cols=193 Identities=18% Similarity=0.124 Sum_probs=156.5
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHH---HHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEecc
Q 015899 194 REDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENL---EAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (398)
Q Consensus 194 ~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL---~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa 270 (398)
....||.++|+.|+++||++|++.+-..+|.|...++ +.+++. +++||+..++|.++.++.++..+|||+|+++..
T Consensus 27 ~~~~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 27 RDSGDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQ-IDIPFTVGGGIHDFETASELILRGADKVSINTA 105 (253)
T ss_dssp SCTTCHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred eeccCHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHh-CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 3456999999999999999999998777777765554 666775 899999999999999999999999999999998
Q ss_pred CCCh-HHHHHHHHHHH----HcCCcE-------EEEcCC---------HHHHHHHhccCCCcEEeec--cccCcccccCh
Q 015899 271 VLPD-LDIRYMTKICK----LLGLTA-------LVEVHD---------EREMDRVLGIEGIELIGIN--NRNLETFEVDN 327 (398)
Q Consensus 271 iL~~-~~L~~Li~~a~----~LGL~~-------LVEVht---------~eEl~rAl~l~Ga~iIGIN--nRdL~tf~vDl 327 (398)
.+.+ ..+.++.+... .+++++ .|++|. .+.++++.++ |++.|.++ +++.....+|+
T Consensus 106 ~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~-G~~~i~~~~~~~~g~~~g~~~ 184 (253)
T 1thf_D 106 AVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKR-GAGEILLTSIDRDGTKSGYDT 184 (253)
T ss_dssp HHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHT-TCSEEEEEETTTTTSCSCCCH
T ss_pred HHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHC-CCCEEEEEeccCCCCCCCCCH
Confidence 8754 34666666542 256666 566664 3557888887 99988776 56676777898
Q ss_pred hhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC-ChHHHHHhhhcCcC
Q 015899 328 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD-DPGKGITGLFGKDI 396 (398)
Q Consensus 328 ~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~-dp~~~i~~L~~~~~ 396 (398)
+...++.+. .++++|++|||++++|+.++.++|+|+|+||++|++++ ++.++++.|....+
T Consensus 185 ~~~~~l~~~--------~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~~~~~~~~~~~~l~~~g~ 246 (253)
T 1thf_D 185 EMIRFVRPL--------TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEYLKKHGV 246 (253)
T ss_dssp HHHHHHGGG--------CCSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTCSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHh--------cCCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHcCCCCHHHHHHHHHHcCC
Confidence 888888654 26899999999999999999999999999999999998 88888887755433
No 18
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.86 E-value=4e-21 Score=179.83 Aligned_cols=192 Identities=21% Similarity=0.139 Sum_probs=155.4
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHH---HHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccC
Q 015899 195 EDFDPVEIARSYEKGGAACLSILTDEKYFKGSFEN---LEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (398)
Q Consensus 195 ~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~ed---L~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (398)
...++.++|+.|+++||++|++..-...|.|...+ ++.+++. +++||+..++|.++.++.++..+|||+|+++...
T Consensus 29 ~~~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~ 107 (252)
T 1ka9_F 29 DAGDPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAER-VFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAA 107 (252)
T ss_dssp STTCHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHH
T ss_pred ecCCHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHh-CCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHH
Confidence 45699999999999999999998544455565444 6777776 8999999999999999999999999999999988
Q ss_pred CCh-HHHHHHHHHHH----HcCCcE-------EEEcCC---------HHHHHHHhccCCCcEEeec--cccCcccccChh
Q 015899 272 LPD-LDIRYMTKICK----LLGLTA-------LVEVHD---------EREMDRVLGIEGIELIGIN--NRNLETFEVDNS 328 (398)
Q Consensus 272 L~~-~~L~~Li~~a~----~LGL~~-------LVEVht---------~eEl~rAl~l~Ga~iIGIN--nRdL~tf~vDl~ 328 (398)
+.+ +.+.++.+... .+++++ .|++|+ .+.++++.++ |++.|.+| +++.....+|++
T Consensus 108 l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~-G~~~i~~~~~~~~g~~~g~~~~ 186 (252)
T 1ka9_F 108 VRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVEL-GAGEILLTSMDRDGTKEGYDLR 186 (252)
T ss_dssp HHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHH-TCCEEEEEETTTTTTCSCCCHH
T ss_pred HhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHc-CCCEEEEecccCCCCcCCCCHH
Confidence 854 34777766653 257776 566664 6777888887 99988877 566666778988
Q ss_pred hHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC-ChHHHHHhhhcCcC
Q 015899 329 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD-DPGKGITGLFGKDI 396 (398)
Q Consensus 329 ~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~-dp~~~i~~L~~~~~ 396 (398)
...++.+. .++++|++|||++++|+.+++++|+|||+||++|++++ ++.++.+.|-...|
T Consensus 187 ~i~~l~~~--------~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~~~~~~~~~~~l~~~~~ 247 (252)
T 1ka9_F 187 LTRMVAEA--------VGVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFGEIPIPKLKRYLAEKGV 247 (252)
T ss_dssp HHHHHHHH--------CSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHHHTTC
T ss_pred HHHHHHHH--------cCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcCCCCHHHHHHHHHHCCC
Confidence 88888765 36899999999999999999999999999999999998 77777766654443
No 19
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.86 E-value=2e-21 Score=181.15 Aligned_cols=184 Identities=15% Similarity=0.130 Sum_probs=150.2
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCH--HHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCCh-
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSF--ENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD- 274 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~--edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~- 274 (398)
||.++|+.|+++||++|+|.+...+|.|.. +.++.+++. +++|++++++|.++.|+.++..+|||+|++++..+.+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~-~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~~p 110 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGK-LDVQVELSGGIRDDESLAAALATGCARVNVGTAALENP 110 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCHHHHHHHHHH-CSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChHHHHHHHHHh-cCCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhhCh
Confidence 899999999999999999999888888776 778888887 8999999999999999999999999999999988754
Q ss_pred HHHHHHHHHHH---HcCCcEE-------EEcCC--------HHHHHHHhccCCCcEEeeccccCccc--ccChhhHHHHh
Q 015899 275 LDIRYMTKICK---LLGLTAL-------VEVHD--------EREMDRVLGIEGIELIGINNRNLETF--EVDNSNTKKLL 334 (398)
Q Consensus 275 ~~L~~Li~~a~---~LGL~~L-------VEVht--------~eEl~rAl~l~Ga~iIGINnRdL~tf--~vDl~~t~~L~ 334 (398)
+.+.++++... .+++++. |.+|. .+.++++.++ |++.|.+++++.... .+|++...++.
T Consensus 111 ~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~-G~~~i~~~~~~~~~~~~g~~~~~~~~l~ 189 (244)
T 2y88_A 111 QWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSE-GCSRFVVTDITKDGTLGGPNLDLLAGVA 189 (244)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHT-TCCCEEEEETTTTTTTSCCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhC-CCCEEEEEecCCccccCCCCHHHHHHHH
Confidence 34555555432 1355554 22332 5667888887 999999998887533 56888888876
Q ss_pred hhhcccccccCCceEEEecCCCCHHHHHHHHHc---CCCEEEEcccccCCCChHHHHHhh
Q 015899 335 EGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA---GVKAVLVGESIVKQDDPGKGITGL 391 (398)
Q Consensus 335 ~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~---GadaVLVGeaLmk~~dp~~~i~~L 391 (398)
+. .++++|++|||++++|+.++.++ |+++|+||++|+..++....+.+.
T Consensus 190 ~~--------~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~~~~~~~~~~~ 241 (244)
T 2y88_A 190 DR--------TDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALAA 241 (244)
T ss_dssp TT--------CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHHH
T ss_pred Hh--------CCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHCCCcCHHHHHHH
Confidence 54 36899999999999999999999 999999999999988665544443
No 20
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.84 E-value=1.6e-20 Score=173.11 Aligned_cols=179 Identities=17% Similarity=0.290 Sum_probs=144.3
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE---ecc-----ccC--CHHHHHHHHHcCc
Q 015899 193 LREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL---CKE-----FIV--DAWQIYYARTKGA 262 (398)
Q Consensus 193 i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL---~KD-----FIi--d~~QI~eAr~~GA 262 (398)
+....++.++|++|+++|+.+|++ ++++.++.+|+. +++|++ ++| +.+ +..++.++..+||
T Consensus 19 ~~~~~~~~~~a~~~~~~Ga~~i~~--------~~~~~i~~i~~~-~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Ga 89 (223)
T 1y0e_A 19 LHSSFIMSKMALAAYEGGAVGIRA--------NTKEDILAIKET-VDLPVIGIVKRDYDHSDVFITATSKEVDELIESQC 89 (223)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEE--------ESHHHHHHHHHH-CCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTC
T ss_pred CCCCccHHHHHHHHHHCCCeeecc--------CCHHHHHHHHHh-cCCCEEeeeccCCCccccccCCcHHHHHHHHhCCC
Confidence 444578899999999999999998 378999999997 899997 454 233 3458999999999
Q ss_pred CEEEEeccCCCh--HHHHHHHHHHHHc--CCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccc-------cChhhHH
Q 015899 263 DAVLLIAAVLPD--LDIRYMTKICKLL--GLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFE-------VDNSNTK 331 (398)
Q Consensus 263 DaVLLiaaiL~~--~~L~~Li~~a~~L--GL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~-------vDl~~t~ 331 (398)
|.|.+++..+.. ..+.++++.+++. |+.+++++||.+|+.++.++ |+++|++++..+++-. .+++...
T Consensus 90 d~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~~~-G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~ 168 (223)
T 1y0e_A 90 EVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKNAARL-GFDYIGTTLHGYTSYTQGQLLYQNDFQFLK 168 (223)
T ss_dssp SEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT-TCSEEECTTTTSSTTSTTCCTTHHHHHHHH
T ss_pred CEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHHHHHHc-CCCEEEeCCCcCcCCCCCCCCCcccHHHHH
Confidence 999999987643 3688999999988 99999999999999999997 9999999876554322 2334444
Q ss_pred HHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHH
Q 015899 332 KLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGIT 389 (398)
Q Consensus 332 ~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~ 389 (398)
++.+. .++++++.|||.|++|+.++.++|+|+|+||++|+++....+.++
T Consensus 169 ~~~~~--------~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~~p~~~~~~~~ 218 (223)
T 1y0e_A 169 DVLQS--------VDAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITRPKEITKRFV 218 (223)
T ss_dssp HHHHH--------CCSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHCHHHHHHHHH
T ss_pred HHHhh--------CCCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHcCcHHHHHHHH
Confidence 44432 268999999999999999999999999999999999444444443
No 21
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.83 E-value=2.9e-19 Score=166.23 Aligned_cols=177 Identities=15% Similarity=0.235 Sum_probs=146.3
Q ss_pred CCCC--CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE---eccc-----cC--CHHHHHHHHHcC
Q 015899 194 REDF--DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL---CKEF-----IV--DAWQIYYARTKG 261 (398)
Q Consensus 194 ~~~~--dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL---~KDF-----Ii--d~~QI~eAr~~G 261 (398)
.... ++.++|++|+++||.+|++. ++++++.+|+. +++|++ ++|| ++ +..|+++++.+|
T Consensus 31 ~~~~~~~~~~~a~~~~~~G~~~i~~~--------~~~~i~~i~~~-~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~G 101 (234)
T 1yxy_A 31 YSETGGIMPLMAKAAQEAGAVGIRAN--------SVRDIKEIQAI-TDLPIIGIIKKDYPPQEPFITATMTEVDQLAALN 101 (234)
T ss_dssp CCTTCCSHHHHHHHHHHHTCSEEEEE--------SHHHHHHHHTT-CCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTT
T ss_pred cCCccchHHHHHHHHHHCCCcEeecC--------CHHHHHHHHHh-CCCCEEeeEcCCCCccccccCChHHHHHHHHHcC
Confidence 3445 88999999999999999983 68999999997 899997 5654 33 346899999999
Q ss_pred cCEEEEeccCCCh---HHHHHHHHHHHHc--CCcEEEEcCCHHHHHHHhccCCCcEE-----eeccccCcccccChhhHH
Q 015899 262 ADAVLLIAAVLPD---LDIRYMTKICKLL--GLTALVEVHDEREMDRVLGIEGIELI-----GINNRNLETFEVDNSNTK 331 (398)
Q Consensus 262 ADaVLLiaaiL~~---~~L~~Li~~a~~L--GL~~LVEVht~eEl~rAl~l~Ga~iI-----GINnRdL~tf~vDl~~t~ 331 (398)
||.|.+++..+.. ..+.++++.+++. |+.+++++|+.+|+..+.++ |+++| |+|+....+...+++...
T Consensus 102 ad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea~~a~~~-Gad~i~~~v~g~~~~~~~~~~~~~~~i~ 180 (234)
T 1yxy_A 102 IAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGLVAHQA-GIDFVGTTLSGYTPYSRQEAGPDVALIE 180 (234)
T ss_dssp CSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHHHHHHHT-TCSEEECTTTTSSTTSCCSSSCCHHHHH
T ss_pred CCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHHHHHHHc-CCCEEeeeccccCCCCcCCCCCCHHHHH
Confidence 9999999987743 3578899999887 99999999999999999997 99999 555544334566776666
Q ss_pred HHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015899 332 KLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 392 (398)
Q Consensus 332 ~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 392 (398)
++.+ . ++++++.|||+|++|+..+.++|||+|+||++|++ |...+++|.
T Consensus 181 ~~~~--------~-~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~---p~~~~~~l~ 229 (234)
T 1yxy_A 181 ALCK--------A-GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR---PKEIAERFI 229 (234)
T ss_dssp HHHH--------T-TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC---HHHHHHHHH
T ss_pred HHHh--------C-CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC---hHHHHHHHH
Confidence 6643 2 67899999999999999999999999999999998 777776664
No 22
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.83 E-value=2.1e-20 Score=174.77 Aligned_cols=184 Identities=18% Similarity=0.166 Sum_probs=144.2
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCH--HHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCCh-
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSF--ENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD- 274 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~--edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~- 274 (398)
||.++|+.|+++||++|+|.+...+|.|.. +.++.+++. +++|++..++|.++.++.++..+|||+|.+....+.+
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~-~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~~p 111 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNRALIAEVAQA-MDIKVELSGGIRDDDTLAAALATGCTRVNLGTAALETP 111 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCHHHHHHHHHH-CSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChHHHHHHHHHh-cCCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhhCH
Confidence 999999999999999999999888887766 558888887 8999999999999999999999999999999987754
Q ss_pred HHHHHHHHHHH---HcCCcEE---EEcC-------CHHH-HHHHhccCCCcEEeecc--ccCcccccChhhHHHHhhhhc
Q 015899 275 LDIRYMTKICK---LLGLTAL---VEVH-------DERE-MDRVLGIEGIELIGINN--RNLETFEVDNSNTKKLLEGER 338 (398)
Q Consensus 275 ~~L~~Li~~a~---~LGL~~L---VEVh-------t~eE-l~rAl~l~Ga~iIGINn--RdL~tf~vDl~~t~~L~~~i~ 338 (398)
+.+.++++... .+++++- |++| +..| ++.+.++ |++.|.+++ ++.....+|++...++.+.
T Consensus 112 ~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~-G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~-- 188 (244)
T 1vzw_A 112 EWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKE-GCARYVVTDIAKDGTLQGPNLELLKNVCAA-- 188 (244)
T ss_dssp HHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHT-TCCCEEEEEC-------CCCHHHHHHHHHT--
T ss_pred HHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhC-CCCEEEEeccCcccccCCCCHHHHHHHHHh--
Confidence 33555554332 1344442 4555 5555 5888887 999888876 5555566788888888764
Q ss_pred ccccccCCceEEEecCCCCHHHHHHHHHc---CCCEEEEcccccCCCChHHHHHhh
Q 015899 339 GEIIRQKNIIVVGESGLFTPDDIAYVQEA---GVKAVLVGESIVKQDDPGKGITGL 391 (398)
Q Consensus 339 ~~~i~~~~v~vVAESGI~t~eD~~~l~~~---GadaVLVGeaLmk~~dp~~~i~~L 391 (398)
.++++|++|||++++|+.+++++ ||++|+||++|+..+...+.+.+.
T Consensus 189 ------~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~~~~~~~~~~~ 238 (244)
T 1vzw_A 189 ------TDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAKAFTLEEALEA 238 (244)
T ss_dssp ------CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHHH
T ss_pred ------cCCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHcCCCCHHHHHHH
Confidence 26899999999999999999999 999999999999998554444343
No 23
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.81 E-value=1.5e-20 Score=175.92 Aligned_cols=183 Identities=19% Similarity=0.212 Sum_probs=145.1
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCc-CCC---CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCC
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKY-FKG---SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~-F~G---s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (398)
.++.++|+.|+++||++|++ +|..+ +.+ .++.++.++ . +++||+..++|.++.++.++..+|||+|+++...+
T Consensus 30 ~~~~~~a~~~~~~Gad~i~v-~d~~~~~~~~~~~~~~i~~i~-~-~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l 106 (241)
T 1qo2_A 30 KDPVELVEKLIEEGFTLIHV-VDLSNAIENSGENLPVLEKLS-E-FAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVL 106 (241)
T ss_dssp SCHHHHHHHHHHTTCCCEEE-EEHHHHHHCCCTTHHHHHHGG-G-GGGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEE-ecccccccCCchhHHHHHHHH-h-cCCcEEEECCCCCHHHHHHHHHCCCCEEEECchHh
Confidence 68999999999999999998 66543 333 455556666 5 78999999999999999999999999999999888
Q ss_pred ChHH-HHHHHHHHH---HcCCcE---EEEcC--------CHHHH-HHHhccCCCcEEeecc--ccCcccccChhhHHHHh
Q 015899 273 PDLD-IRYMTKICK---LLGLTA---LVEVH--------DEREM-DRVLGIEGIELIGINN--RNLETFEVDNSNTKKLL 334 (398)
Q Consensus 273 ~~~~-L~~Li~~a~---~LGL~~---LVEVh--------t~eEl-~rAl~l~Ga~iIGINn--RdL~tf~vDl~~t~~L~ 334 (398)
.+.+ +.++ +... .+|+++ .|++| +..|+ .++.++ |+..|.+|+ |+.+...+|++...++.
T Consensus 107 ~~p~~~~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~-G~~~i~~t~~~~~g~~~g~~~~~i~~l~ 184 (241)
T 1qo2_A 107 EDPSFLKSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEY-GLEEIVHTEIEKDGTLQEHDFSLTKKIA 184 (241)
T ss_dssp HCTTHHHHH-HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTT-TCCEEEEEETTHHHHTCCCCHHHHHHHH
T ss_pred hChHHHHHH-HHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhC-CCCEEEEEeecccccCCcCCHHHHHHHH
Confidence 5443 5555 4321 245555 56665 66675 677787 999999987 45555678988888887
Q ss_pred hhhcccccccCCceEEEecCCCCHHHHHHHHHc-----C-CCEEEEcccccCCCChHHHHHhhh
Q 015899 335 EGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA-----G-VKAVLVGESIVKQDDPGKGITGLF 392 (398)
Q Consensus 335 ~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~-----G-adaVLVGeaLmk~~dp~~~i~~L~ 392 (398)
+. .++++|++|||++++|+.+++++ | ||||+||++|++.+.+.+.+.+.+
T Consensus 185 ~~--------~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~~~~~~~~~~~ 240 (241)
T 1qo2_A 185 IE--------AEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGILTVEVMKRYA 240 (241)
T ss_dssp HH--------HTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTSSCHHHHHHHH
T ss_pred Hh--------cCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCCCCHHHHHHHh
Confidence 65 26899999999999999999999 9 999999999999988777665543
No 24
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.76 E-value=5.5e-19 Score=166.06 Aligned_cols=189 Identities=15% Similarity=0.082 Sum_probs=72.4
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeccCCcCCC---CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccC
Q 015899 195 EDFDPVEIARSYEKGGAACLSILTDEKYFKG---SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (398)
Q Consensus 195 ~~~dp~~iA~aY~~~GA~aISVLTd~~~F~G---s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (398)
...++.++|+.|++.||++|++.+-...+.+ .++.++.+++. +++||+..++|.++.++.++...|||+|++....
T Consensus 33 ~~~~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~ 111 (247)
T 3tdn_A 33 TGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLRGADKVSINTAA 111 (247)
T ss_dssp EEEEHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHH
T ss_pred CCCCHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHh-CCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHH
Confidence 3568999999999999999998655443322 57888888887 8999999999999999999999999999999988
Q ss_pred CChHH-HHHHHHHHH----HcCCcEE-------EEcC---------CHHHHHHHhccCCCcEEeeccccCc--ccccChh
Q 015899 272 LPDLD-IRYMTKICK----LLGLTAL-------VEVH---------DEREMDRVLGIEGIELIGINNRNLE--TFEVDNS 328 (398)
Q Consensus 272 L~~~~-L~~Li~~a~----~LGL~~L-------VEVh---------t~eEl~rAl~l~Ga~iIGINnRdL~--tf~vDl~ 328 (398)
+.+.+ +.++.+... .+++++- |.+| ..+.++++.++ |++.|.+++++.. ...+|++
T Consensus 112 l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~-G~~~i~~t~~~~~g~~~g~~~~ 190 (247)
T 3tdn_A 112 VENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKR-GAGEILLTSIDRDGTKSGYDTE 190 (247)
T ss_dssp HHCTHHHHHHHHHHC-----------------------------------------------------------------
T ss_pred hhChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhc-CCCEEEEecccCCCCcCCCCHH
Confidence 85433 555544331 1355442 2222 12234555565 8999988876432 3346666
Q ss_pred hHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 329 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 329 ~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
...++.+. .++++|+.|||.|++|+.++.++|||+|+||++|++.+++...++++++
T Consensus 191 ~~~~i~~~--------~~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~~p~~~~~~~~~~~ 247 (247)
T 3tdn_A 191 MIRFVRPL--------TTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPSLITQIAQTFG 247 (247)
T ss_dssp -----------------------------------------------------------------
T ss_pred HHHHHHHh--------CCCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHcCcHHHHHHHHhcC
Confidence 66666543 2689999999999999999999999999999999999999999888764
No 25
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.75 E-value=1.2e-18 Score=168.28 Aligned_cols=180 Identities=21% Similarity=0.229 Sum_probs=138.4
Q ss_pred HHHHHHHHHcCCcEEEE----eccCCcCCC-----CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEecc
Q 015899 200 VEIARSYEKGGAACLSI----LTDEKYFKG-----SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISV----LTd~~~F~G-----s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa 270 (398)
.++|++|.++||.+|++ .+|..+|+| +++.++.+++. +++|++.++.+-+..++..+.++|||+|.. ..
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~-~~~Pvi~~~~~~~~~~~~~~~~aGad~v~~-~~ 108 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAA-VSIPVMAKVRIGHFVEAMILEAIGVDFIDE-SE 108 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTT-CSSCEEEEEETTCHHHHHHHHHTTCSEEEE-ET
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHh-cCCCeEEEeccCCHHHHHHHHHCCCCEEee-eC
Confidence 79999999999999975 566678888 89999999986 899999876656678888889999999932 22
Q ss_pred CCChHHHHHHHHHHHH--cCCcEEEEcCCHHHHHHHhccCCCcEEeeccc------------------------cC----
Q 015899 271 VLPDLDIRYMTKICKL--LGLTALVEVHDEREMDRVLGIEGIELIGINNR------------------------NL---- 320 (398)
Q Consensus 271 iL~~~~L~~Li~~a~~--LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnR------------------------dL---- 320 (398)
..+. .++++.++. +++.+++++||.+++.++.++ |+++|+++.. .+
T Consensus 109 ~~~~---~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~-Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~ 184 (297)
T 2zbt_A 109 VLTP---ADEEHHIDKWKFKVPFVCGARNLGEALRRIAE-GAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDE 184 (297)
T ss_dssp TSCC---SCSSCCCCGGGCSSCEEEEESSHHHHHHHHHT-TCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGG
T ss_pred CCCh---HHHHHHHHHhCCCceEEeecCCHHHHHHHHHc-CCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCC
Confidence 2222 223333333 488899999999999999997 9999988721 01
Q ss_pred -----cccccChhhHHHHhhhhcccccccCCceEE--EecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 321 -----ETFEVDNSNTKKLLEGERGEIIRQKNIIVV--GESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 321 -----~tf~vDl~~t~~L~~~i~~~~i~~~~v~vV--AESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
.....+++...++.+. .+++++ +.|||.|++|+..+.++|||+|+||++|++++||...+++|..
T Consensus 185 ~~~~~~~~~~~~~~i~~l~~~--------~~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~~dp~~~~~~l~~ 256 (297)
T 2zbt_A 185 LMAYAKEIGAPFELVKWVHDH--------GRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVR 256 (297)
T ss_dssp HHHHHHHHTCCHHHHHHHHHH--------SSCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGSSCHHHHHHHHHH
T ss_pred chhhhhcchhhHHHHHHHHHh--------cCCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCCCCHHHHHHHHHH
Confidence 1133445555555443 133444 9999999999999999999999999999999999988888753
No 26
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=99.74 E-value=1.9e-17 Score=151.74 Aligned_cols=174 Identities=13% Similarity=0.141 Sum_probs=138.9
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEe-ccccCCHHHHHHHHHcCcCEEEEeccCCChHH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC-KEFIVDAWQIYYARTKGADAVLLIAAVLPDLD 276 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~-KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~ 276 (398)
++.++++.+.++|+++|++ ++.. .+..+.++.+++. .++|++. .+++.++.+++.++.+|||.|.+.. ..
T Consensus 20 ~~~~~~~~~~~~G~~~i~l-~~~~--~~~~~~i~~i~~~-~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~--~~--- 90 (212)
T 2v82_A 20 EALAHVGAVIDAGFDAVEI-PLNS--PQWEQSIPAIVDA-YGDKALIGAGTVLKPEQVDALARMGCQLIVTPN--IH--- 90 (212)
T ss_dssp HHHHHHHHHHHHTCCEEEE-ETTS--TTHHHHHHHHHHH-HTTTSEEEEECCCSHHHHHHHHHTTCCEEECSS--CC---
T ss_pred HHHHHHHHHHHCCCCEEEE-eCCC--hhHHHHHHHHHHh-CCCCeEEEeccccCHHHHHHHHHcCCCEEEeCC--CC---
Confidence 6889999999999999998 5543 2335666667664 5677654 4677899999999999999998543 22
Q ss_pred HHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCC
Q 015899 277 IRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLF 356 (398)
Q Consensus 277 L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~ 356 (398)
..+++.++.+|+.+++++||.+|+..+..+ |+++|++++.+ ..+++...++.+. + +.++++++.|||+
T Consensus 91 -~~~~~~~~~~g~~~~~g~~t~~e~~~a~~~-G~d~v~v~~t~----~~g~~~~~~l~~~-----~-~~~ipvia~GGI~ 158 (212)
T 2v82_A 91 -SEVIRRAVGYGMTVCPGCATATEAFTALEA-GAQALKIFPSS----AFGPQYIKALKAV-----L-PSDIAVFAVGGVT 158 (212)
T ss_dssp -HHHHHHHHHTTCEEECEECSHHHHHHHHHT-TCSEEEETTHH----HHCHHHHHHHHTT-----S-CTTCEEEEESSCC
T ss_pred -HHHHHHHHHcCCCEEeecCCHHHHHHHHHC-CCCEEEEecCC----CCCHHHHHHHHHh-----c-cCCCeEEEeCCCC
Confidence 345678889999999999999999999997 99999986532 3456666666554 1 2258999999996
Q ss_pred CHHHHHHHHHcCCCEEEEcccccCC----CChHHHHHhhhc
Q 015899 357 TPDDIAYVQEAGVKAVLVGESIVKQ----DDPGKGITGLFG 393 (398)
Q Consensus 357 t~eD~~~l~~~GadaVLVGeaLmk~----~dp~~~i~~L~~ 393 (398)
++++..+.++|+++|.||++|++. +||.+.+++|..
T Consensus 159 -~~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l~~ 198 (212)
T 2v82_A 159 -PENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVK 198 (212)
T ss_dssp -TTTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999998 799999988854
No 27
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.72 E-value=8.5e-17 Score=148.42 Aligned_cols=188 Identities=21% Similarity=0.194 Sum_probs=140.9
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCC---CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEec
Q 015899 193 LREDFDPVEIARSYEKGGAACLSILTDEKYFKG---SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIA 269 (398)
Q Consensus 193 i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~G---s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLia 269 (398)
+....++.++++.++++||++|++..-...|.+ .++.++.+++. +++||+..++|.++.++.++..+|||+|.+..
T Consensus 29 ~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~-~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~ 107 (253)
T 1h5y_A 29 IREVGDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEA-VSIPVLVGGGVRSLEDATTLFRAGADKVSVNT 107 (253)
T ss_dssp HHEEECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHH-CSSCEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred eeecccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 334568999999999999999998643222222 45677788876 79999999999999999999999999999988
Q ss_pred cCCChHHHHHHHHHHHHcCCc---E-----------EEEcC---------CHHHHHHHhccCCCcEEeeccccCccc--c
Q 015899 270 AVLPDLDIRYMTKICKLLGLT---A-----------LVEVH---------DEREMDRVLGIEGIELIGINNRNLETF--E 324 (398)
Q Consensus 270 aiL~~~~L~~Li~~a~~LGL~---~-----------LVEVh---------t~eEl~rAl~l~Ga~iIGINnRdL~tf--~ 324 (398)
..+.+.+ .+.+.++.+|++ + +|.+| ..+.++.+.++ |++.|.+++++.... .
T Consensus 108 ~~~~~~~--~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~-G~d~i~~~~~~~~g~~~~ 184 (253)
T 1h5y_A 108 AAVRNPQ--LVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEEL-GAGEILLTSIDRDGTGLG 184 (253)
T ss_dssp HHHHCTH--HHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHH-TCSEEEEEETTTTTTCSC
T ss_pred HHhhCcH--HHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhC-CCCEEEEecccCCCCcCc
Confidence 7764322 233444555643 2 23332 24567788887 999999998775433 3
Q ss_pred cChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015899 325 VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 392 (398)
Q Consensus 325 vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 392 (398)
.|++...++.+. .++++++.|||++++|+.++.++||++|+||++|++.+++.+.+.+.+
T Consensus 185 ~~~~~i~~l~~~--------~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~~~~~~~~l 244 (253)
T 1h5y_A 185 YDVELIRRVADS--------VRIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFRVLSIAQVKRYL 244 (253)
T ss_dssp CCHHHHHHHHHH--------CSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHH
T ss_pred CCHHHHHHHHHh--------cCCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCCCHHHHHHHH
Confidence 467777776653 267899999999999999999999999999999999886555444443
No 28
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.65 E-value=4.9e-16 Score=141.87 Aligned_cols=182 Identities=13% Similarity=0.174 Sum_probs=137.4
Q ss_pred HHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccC---CHHHHHHHHHcCcCEEEEeccCCChH
Q 015899 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIV---DAWQIYYARTKGADAVLLIAAVLPDL 275 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIi---d~~QI~eAr~~GADaVLLiaaiL~~~ 275 (398)
..++++... +|++.|-+-+ |.++.++++.++.+|+...++||.+ |+.+ ..+++.++..+|||+|++.... ..+
T Consensus 15 ~~~~~~~~~-~~~diie~G~-p~~~~~g~~~i~~ir~~~~~~~i~~-~~~~~~~~~~~~~~~~~~Gad~v~v~~~~-~~~ 90 (211)
T 3f4w_A 15 AMVFMDKVV-DDVDIIEVGT-PFLIREGVNAIKAIKEKYPHKEVLA-DAKIMDGGHFESQLLFDAGADYVTVLGVT-DVL 90 (211)
T ss_dssp HHHHHHHHG-GGCSEEEECH-HHHHHHTTHHHHHHHHHCTTSEEEE-EEEECSCHHHHHHHHHHTTCSEEEEETTS-CHH
T ss_pred HHHHHHHhh-cCccEEEeCc-HHHHhccHHHHHHHHHhCCCCEEEE-EEEeccchHHHHHHHHhcCCCEEEEeCCC-Chh
Confidence 345566664 6788877755 3335667899999998535899864 3332 2456999999999999997654 345
Q ss_pred HHHHHHHHHHHcCCcEEEEcC---CH-HHHHHHhccCCCcEEeecc-ccCccccc-ChhhHHHHhhhhcccccccCCceE
Q 015899 276 DIRYMTKICKLLGLTALVEVH---DE-REMDRVLGIEGIELIGINN-RNLETFEV-DNSNTKKLLEGERGEIIRQKNIIV 349 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEVh---t~-eEl~rAl~l~Ga~iIGINn-RdL~tf~v-Dl~~t~~L~~~i~~~~i~~~~v~v 349 (398)
.+.++++.+++.|+.+++|+. |. ++++.+.++ |+++|++++ ++..++.. +++...++.+. + .++++
T Consensus 91 ~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~-g~d~i~v~~g~~g~~~~~~~~~~i~~l~~~-----~--~~~~i 162 (211)
T 3f4w_A 91 TIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEA-GADMLAVHTGTDQQAAGRKPIDDLITMLKV-----R--RKARI 162 (211)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHH-TCCEEEEECCHHHHHTTCCSHHHHHHHHHH-----C--SSCEE
T ss_pred HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHc-CCCEEEEcCCCcccccCCCCHHHHHHHHHH-----c--CCCcE
Confidence 789999999999999999953 43 558888887 999999873 22233332 45555555443 1 25789
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 350 VGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 350 VAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
++.|||+ ++++..+.++|+|+|+||++|++++||.+++++|..
T Consensus 163 ~~~gGI~-~~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~ 205 (211)
T 3f4w_A 163 AVAGGIS-SQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQ 205 (211)
T ss_dssp EEESSCC-TTTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHH
T ss_pred EEECCCC-HHHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHH
Confidence 9999995 999999999999999999999999999999988864
No 29
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.64 E-value=2.7e-15 Score=136.53 Aligned_cols=183 Identities=17% Similarity=0.198 Sum_probs=143.3
Q ss_pred eEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCC--CCcEEeccccCCHHHHH
Q 015899 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEFIVDAWQIY 255 (398)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v--~lPVL~KDFIid~~QI~ 255 (398)
.+|+=++-.++. +..++++.+.++|+.+|++..... +..+.++.+|+. . +++ +.-+.+.++.|+.
T Consensus 11 ~~i~~~~~~~~~--------~~~~~~~~~~~~G~~~iev~~~~~---~~~~~i~~ir~~-~~~~~~-ig~~~v~~~~~~~ 77 (205)
T 1wa3_A 11 KIVAVLRANSVE--------EAKEKALAVFEGGVHLIEITFTVP---DADTVIKELSFL-KEKGAI-IGAGTVTSVEQCR 77 (205)
T ss_dssp CEEEEECCSSHH--------HHHHHHHHHHHTTCCEEEEETTST---THHHHHHHTHHH-HHTTCE-EEEESCCSHHHHH
T ss_pred CEEEEEecCCHH--------HHHHHHHHHHHCCCCEEEEeCCCh---hHHHHHHHHHHH-CCCCcE-EEecccCCHHHHH
Confidence 467666655543 578899999999999999976542 345668888875 3 333 3344567899999
Q ss_pred HHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhh
Q 015899 256 YARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLE 335 (398)
Q Consensus 256 eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~ 335 (398)
+|..+|||+| +...++ .++++.++..|+.++.+++|.+|+.+++++ |+++|.+++.+.. .++...++.+
T Consensus 78 ~a~~~Gad~i--v~~~~~----~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~-Gad~vk~~~~~~~----g~~~~~~l~~ 146 (205)
T 1wa3_A 78 KAVESGAEFI--VSPHLD----EEISQFCKEKGVFYMPGVMTPTELVKAMKL-GHTILKLFPGEVV----GPQFVKAMKG 146 (205)
T ss_dssp HHHHHTCSEE--ECSSCC----HHHHHHHHHHTCEEECEECSHHHHHHHHHT-TCCEEEETTHHHH----HHHHHHHHHT
T ss_pred HHHHcCCCEE--EcCCCC----HHHHHHHHHcCCcEECCcCCHHHHHHHHHc-CCCEEEEcCcccc----CHHHHHHHHH
Confidence 9999999999 344444 357788999999999999999999999998 9999998864331 3444555544
Q ss_pred hhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC---hHHHHHhhhc
Q 015899 336 GERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD---PGKGITGLFG 393 (398)
Q Consensus 336 ~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d---p~~~i~~L~~ 393 (398)
. + + ++++++.|||+ ++++..+.++|+++|.||++|++ +| |.+.+++|..
T Consensus 147 ~-----~-~-~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~~ 198 (205)
T 1wa3_A 147 P-----F-P-NVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFVE 198 (205)
T ss_dssp T-----C-T-TCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHHH
T ss_pred h-----C-C-CCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHHH
Confidence 3 1 2 68999999995 89999999999999999999999 89 9888888764
No 30
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.63 E-value=9.9e-16 Score=145.45 Aligned_cols=191 Identities=19% Similarity=0.252 Sum_probs=141.6
Q ss_pred ceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhc-CCCCcEE---------ecc
Q 015899 177 PALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA-GVKCPLL---------CKE 246 (398)
Q Consensus 177 ~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a-~v~lPVL---------~KD 246 (398)
..++.-+...- ..|-+....++..++++|.++|+.+|.+ ++ ..+..+++. ..++|++ +||
T Consensus 26 ~~~~~~id~~~-~l~p~~~~~~~~~~~~~~~~~g~~~i~~--~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~~d 95 (273)
T 2qjg_A 26 KTVIVPMDHGV-SNGPIKGLIDIRKTVNDVAEGGANAVLL--HK-------GIVRHGHRGYGKDVGLIIHLSGGTAISPN 95 (273)
T ss_dssp CEEEEECCHHH-HHCSCTTSSSHHHHHHHHHHHTCSEEEE--CH-------HHHHSCCCSSSCCCEEEEECEECCTTSSS
T ss_pred CEEEEEccccc-ccCCCcchhhHHHHHHHHHhcCCCEEEe--CH-------HHHHHHHHhhcCCCCEEEEEcCCCcCCCC
Confidence 45666666511 0233556789999999999999999975 22 122222211 1255664 334
Q ss_pred ccCC---HHHHHHHHHcCcCEE--EEeccCCChH----HHHHHHHHHHHcCCcEEEEc----------CCH---HHH-HH
Q 015899 247 FIVD---AWQIYYARTKGADAV--LLIAAVLPDL----DIRYMTKICKLLGLTALVEV----------HDE---REM-DR 303 (398)
Q Consensus 247 FIid---~~QI~eAr~~GADaV--LLiaaiL~~~----~L~~Li~~a~~LGL~~LVEV----------ht~---eEl-~r 303 (398)
+ ++ .+++.+|...|||.| .+.....+.+ +++++.+.|+..|+.+++|+ ++. +++ +.
T Consensus 96 ~-~~~~~~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~ 174 (273)
T 2qjg_A 96 P-LKKVIVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARL 174 (273)
T ss_dssp T-TCCEECSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHH
T ss_pred c-ccchHHHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHH
Confidence 3 34 678999999999999 6666666653 47778888999999999998 454 555 77
Q ss_pred HhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCC--HHH----HHHHHHcCCCEEEEccc
Q 015899 304 VLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFT--PDD----IAYVQEAGVKAVLVGES 377 (398)
Q Consensus 304 Al~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t--~eD----~~~l~~~GadaVLVGea 377 (398)
+.++ |+++|++++ ..|++...++.+. .++++++.|||.+ .+| +..+.++|+++|.||++
T Consensus 175 a~~~-Gad~i~~~~------~~~~~~l~~i~~~--------~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~ 239 (273)
T 2qjg_A 175 GAEL-GADIVKTSY------TGDIDSFRDVVKG--------CPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRN 239 (273)
T ss_dssp HHHT-TCSEEEECC------CSSHHHHHHHHHH--------CSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHH
T ss_pred HHHc-CCCEEEECC------CCCHHHHHHHHHh--------CCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHH
Confidence 7886 999999984 3678877777654 2578999999995 778 77777899999999999
Q ss_pred ccCCCChHHHHHhhhc
Q 015899 378 IVKQDDPGKGITGLFG 393 (398)
Q Consensus 378 Lmk~~dp~~~i~~L~~ 393 (398)
|++.+||.+.+++|..
T Consensus 240 i~~~~~~~~~~~~l~~ 255 (273)
T 2qjg_A 240 IFQHDDVVGITRAVCK 255 (273)
T ss_dssp HHTSSSHHHHHHHHHH
T ss_pred hhCCCCHHHHHHHHHH
Confidence 9999999999988864
No 31
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=99.61 E-value=5.3e-15 Score=140.93 Aligned_cols=177 Identities=17% Similarity=0.130 Sum_probs=127.5
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCc-----CC-CCHH-HH------HHHHhcCCCCcEEeccccCCHHHHHHHHHcCcC
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKY-----FK-GSFE-NL------EAVRSAGVKCPLLCKEFIVDAWQIYYARTKGAD 263 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~-----F~-Gs~e-dL------~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GAD 263 (398)
.+..+..+...++|+.+|-+= ++.. |+ -+.. .+ ..+.+. -+.|++-.| .+++ |+++|||
T Consensus 43 ~~~~~~~~~al~~Gv~~vqlR-~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~-~~~~liInd----~~~l--A~~~gAd 114 (243)
T 3o63_A 43 GDLAQFAEAALAGGVDIIQLR-DKGSPGELRFGPLQARDELAACEILADAAHR-YGALFAVND----RADI--ARAAGAD 114 (243)
T ss_dssp CCHHHHHHHHHHTTCSEEEEC-CTTCHHHHHHCSCCHHHHHHHHHHHHHHHHH-TTCEEEEES----CHHH--HHHHTCS
T ss_pred chHHHHHHHHHHCCCCEEEEc-cCCCCccccccCCCHHHHHHHHHHHHHHHHh-hCCEEEEeC----HHHH--HHHhCCC
Confidence 467788888889999988872 2220 00 1122 22 222222 367766554 4566 7789999
Q ss_pred EEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCccc-----ccChhhHHHHhhhhc
Q 015899 264 AVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETF-----EVDNSNTKKLLEGER 338 (398)
Q Consensus 264 aVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf-----~vDl~~t~~L~~~i~ 338 (398)
+|.|+...++..+++.++. .++.+-+.|||.+|+.+|.+. |+++||+++.--++- ..+++...++...
T Consensus 115 GVHLg~~dl~~~~~r~~~~----~~~~iG~S~ht~~Ea~~A~~~-GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~-- 187 (243)
T 3o63_A 115 VLHLGQRDLPVNVARQILA----PDTLIGRSTHDPDQVAAAAAG-DADYFCVGPCWPTPTKPGRAAPGLGLVRVAAEL-- 187 (243)
T ss_dssp EEEECTTSSCHHHHHHHSC----TTCEEEEEECSHHHHHHHHHS-SCSEEEECCSSCCCC-----CCCHHHHHHHHTC--
T ss_pred EEEecCCcCCHHHHHHhhC----CCCEEEEeCCCHHHHHHHhhC-CCCEEEEcCccCCCCCCCcchhhHHHHHHHHHh--
Confidence 9999999998765555432 356666789999999999997 999999987432221 2355555555442
Q ss_pred ccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 339 GEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 339 ~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
.+.++++|++||| +++++..+.++|+++|.||++||+++||.+++++|..
T Consensus 188 ----~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~~ 237 (243)
T 3o63_A 188 ----GGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRS 237 (243)
T ss_dssp -------CCCEEEESSC-CTTTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHHHH
T ss_pred ----ccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHH
Confidence 1136899999999 9999999999999999999999999999999998864
No 32
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=99.53 E-value=1.9e-13 Score=124.16 Aligned_cols=170 Identities=20% Similarity=0.178 Sum_probs=126.1
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCH----HHHHHHHhc--CCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccC
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~----edL~~Ir~a--~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (398)
++.+.++.+.++||++|.+ +++. .+. +.++.+++. ..++||+..++ +..+..+|||.|.+....
T Consensus 27 ~~~~~~~~~~~~G~~~i~l-~~~~---~~~~~~~~~~~~l~~~~~~~~v~v~v~~~------~~~a~~~gad~v~l~~~~ 96 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQM-RIKN---APTREMYEIGKTLRQLTREYDALFFVDDR------VDVALAVDADGVQLGPED 96 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEE-CCCS---CCHHHHHHHHHHHHHHHHHTTCEEEEESC------HHHHHHHTCSEEEECTTS
T ss_pred hHHHHHHHHHHCCCCEEEE-CCCC---CCHHHHHHHHHHHHHHHHHcCCeEEEcCh------HHHHHHcCCCEEEECCcc
Confidence 8999999999999999976 4432 233 333344331 13677776543 567888999999987665
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcc------cccChhhHHHHhhhhcccccccC
Q 015899 272 LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLET------FEVDNSNTKKLLEGERGEIIRQK 345 (398)
Q Consensus 272 L~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~t------f~vDl~~t~~L~~~i~~~~i~~~ 345 (398)
++.+.++++ . .++.+.+++||.+|+..+... |+++|.+++.. .+ ...+++...++.+. .
T Consensus 97 ~~~~~~~~~----~-~~~~~~v~~~t~~e~~~~~~~-g~d~i~~~~~~-~~~~~~~~~~~~~~~l~~l~~~--------~ 161 (215)
T 1xi3_A 97 MPIEVAKEI----A-PNLIIGASVYSLEEALEAEKK-GADYLGAGSVF-PTKTKEDARVIGLEGLRKIVES--------V 161 (215)
T ss_dssp CCHHHHHHH----C-TTSEEEEEESSHHHHHHHHHH-TCSEEEEECSS-CC----CCCCCHHHHHHHHHHH--------C
T ss_pred CCHHHHHHh----C-CCCEEEEecCCHHHHHHHHhc-CCCEEEEcCCc-cCCCCCCCCCcCHHHHHHHHHh--------C
Confidence 654434333 2 588889999999999998886 99999986531 12 12345555555443 2
Q ss_pred CceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 346 NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 346 ~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
++++++.|||+ ++++..+.++|+++|.||++|++.+||.+.+++|..
T Consensus 162 ~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~ 208 (215)
T 1xi3_A 162 KIPVVAIGGIN-KDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRK 208 (215)
T ss_dssp SSCEEEESSCC-TTTHHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred CCCEEEECCcC-HHHHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHH
Confidence 57899999998 999999999999999999999999999988888764
No 33
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.8e-13 Score=131.23 Aligned_cols=184 Identities=15% Similarity=0.102 Sum_probs=133.1
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCCh
Q 015899 195 EDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (398)
Q Consensus 195 ~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~ 274 (398)
...||.++|+.|.+.||..|+++.... .+.+.++.+++. +.+||.....|.+. ++.+.. +|||.|.+.++.+.+
T Consensus 36 ~~~dp~~~A~~~~~~Ga~~l~vvDL~~---~n~~~i~~i~~~-~~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~~ 109 (260)
T 2agk_A 36 SQHPSSYYAKLYKDRDVQGCHVIKLGP---NNDDAAREALQE-SPQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLFTK 109 (260)
T ss_dssp -CCCHHHHHHHHHHTTCTTCEEEEESS---SCHHHHHHHHHH-STTTSEEESSCCTT-THHHHT-TTCSCEEECGGGBCT
T ss_pred cCCCHHHHHHHHHHcCCCEEEEEeCCC---CCHHHHHHHHhc-CCceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHHhh
Confidence 346999999999999999999987765 678899999887 89999988888776 888888 999999999998865
Q ss_pred ------HHHHHHHHHHHHcCCcEEEEcC--------------------CHH-HHHHHhccCCCcEEeeccccCcc--ccc
Q 015899 275 ------LDIRYMTKICKLLGLTALVEVH--------------------DER-EMDRVLGIEGIELIGINNRNLET--FEV 325 (398)
Q Consensus 275 ------~~L~~Li~~a~~LGL~~LVEVh--------------------t~e-El~rAl~l~Ga~iIGINnRdL~t--f~v 325 (398)
+.++++++...+-.+-+.+++. +.. |+-+.++-. +.-|-++.++-.. -.+
T Consensus 110 ~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~t~i~~dG~~~G~ 188 (260)
T 2agk_A 110 EGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLIHAADVEGLCGGI 188 (260)
T ss_dssp TCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEEEC-------CCC
T ss_pred cCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEEEeeccccCcCCC
Confidence 4477777766421222223222 122 444444433 6766677665422 346
Q ss_pred ChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHc--CCCEEEEcccc--cCCC-ChHHHHH
Q 015899 326 DNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA--GVKAVLVGESI--VKQD-DPGKGIT 389 (398)
Q Consensus 326 Dl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~--GadaVLVGeaL--mk~~-dp~~~i~ 389 (398)
|++...++.+.++. ..++++|++|||.|++|+.++++. |+++|+||+++ +..+ .....+.
T Consensus 189 d~eli~~l~~~~~~----~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~ 253 (260)
T 2agk_A 189 DELLVSKLFEWTKD----YDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCC 253 (260)
T ss_dssp CHHHHHHHHHHHTT----CSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHHHH
T ss_pred CHHHHHHHHHhhcc----cCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHH
Confidence 88888888765200 016899999999999999999998 99999999996 7766 4443333
No 34
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.44 E-value=5.1e-13 Score=140.38 Aligned_cols=190 Identities=17% Similarity=0.109 Sum_probs=138.8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeccCCcCCC------CHHHHHHHHhcCCCCcEEeccccCCH-----------HHHHH
Q 015899 194 REDFDPVEIARSYEKGGAACLSILTDEKYFKG------SFENLEAVRSAGVKCPLLCKEFIVDA-----------WQIYY 256 (398)
Q Consensus 194 ~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~G------s~edL~~Ir~a~v~lPVL~KDFIid~-----------~QI~e 256 (398)
+...||+++|++|.++||+.|+++.-..+..| +++.++.+++. +++||.....|.+. ..+.+
T Consensus 277 ~~~~dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~-~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~ 355 (555)
T 1jvn_A 277 RNLGKPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKT-VFVPLTVGGGIKDIVDVDGTKIPALEVASL 355 (555)
T ss_dssp --CHHHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTT-CCSCEEEESSCSCEECTTCCEECHHHHHHH
T ss_pred eEcCCHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhh-CCCcEEEeCccccchhcccccchHHHHHHH
Confidence 33449999999999999999999988877654 35566777665 89999987777775 34777
Q ss_pred HHHcCcCEEEEeccCCCh--------------HHHHHHHHHHHH----cCCcEEE-------------------------
Q 015899 257 ARTKGADAVLLIAAVLPD--------------LDIRYMTKICKL----LGLTALV------------------------- 293 (398)
Q Consensus 257 Ar~~GADaVLLiaaiL~~--------------~~L~~Li~~a~~----LGL~~LV------------------------- 293 (398)
...+|||.|.+.++.+.+ +-++++.+...+ +++++--
T Consensus 356 ~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (555)
T 1jvn_A 356 YFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEK 435 (555)
T ss_dssp HHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCC
T ss_pred HHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCc
Confidence 889999999999987542 234555443321 2333310
Q ss_pred ---------------EcCCHHHHHHHhccCCCcEEeeccccCcc--cccChhhHHHHhhhhcccccccCCceEEEecCCC
Q 015899 294 ---------------EVHDEREMDRVLGIEGIELIGINNRNLET--FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLF 356 (398)
Q Consensus 294 ---------------EVht~eEl~rAl~l~Ga~iIGINnRdL~t--f~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~ 356 (398)
++...+.++++.++ |++.|-++.++-.. -.+|++...++.+. .++++|++|||.
T Consensus 436 ~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~-Ga~~il~t~~~~dG~~~G~d~~li~~l~~~--------~~iPVIasGGi~ 506 (555)
T 1jvn_A 436 YCWYQCTIKGGRESRDLGVWELTRACEAL-GAGEILLNCIDKDGSNSGYDLELIEHVKDA--------VKIPVIASSGAG 506 (555)
T ss_dssp EEEEEEEETTTTEEEEEEHHHHHHHHHHT-TCCEEEECCGGGTTTCSCCCHHHHHHHHHH--------CSSCEEECSCCC
T ss_pred ceeEEEEEecCccCCCCCHHHHHHHHHHc-CCCEEEEeCCCCCCCCCCCCHHHHHHHHHh--------CCccEEEECCCC
Confidence 01135777788887 99988888665422 24688888887764 368999999999
Q ss_pred CHHHHHHHHH-cCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 357 TPDDIAYVQE-AGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 357 t~eD~~~l~~-~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
+++|+.++++ .|++||+||++|+..+...+.+++.+.
T Consensus 507 s~~d~~~~~~~~G~~gvivg~a~~~~~~~~~e~~~~l~ 544 (555)
T 1jvn_A 507 VPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLL 544 (555)
T ss_dssp SHHHHHHHHHHSCCSEEEESHHHHTTSCCHHHHHHHHH
T ss_pred CHHHHHHHHHhcCChHHHHHHHHHcCCCCHHHHHHHHH
Confidence 9999999998 899999999999999988777776543
No 35
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.44 E-value=9.9e-13 Score=126.06 Aligned_cols=200 Identities=18% Similarity=0.098 Sum_probs=130.1
Q ss_pred eEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcC--CCCHHHH-HHHHhcCCCCcEEecccc-CCHH-
Q 015899 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYF--KGSFENL-EAVRSAGVKCPLLCKEFI-VDAW- 252 (398)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F--~Gs~edL-~~Ir~a~v~lPVL~KDFI-id~~- 252 (398)
-.|+-++-.||----...+-++....++++++||+.|-|- -+..- +.+.+++ ..+++ ...|++-.... ....
T Consensus 4 ~~i~~~~~~~~~~~~t~g~p~~~~~~~~l~~~Gad~ielg-~pr~~~~g~~~~~~~~~l~~--~~~~~~pn~~~~~~~~~ 80 (264)
T 1xm3_A 4 LTIGGKSFQSRLLLGTGKYPSFDIQKEAVAVSESDILTFA-VRRMNIFEASQPNFLEQLDL--SKYTLLPNTAGASTAEE 80 (264)
T ss_dssp EEETTEEESCCEEEECSCSSCHHHHHHHHHHHTCSEEEEE-TTSSTTC-------CTTCCG--GGSEEEEECTTCSSHHH
T ss_pred eEECCEEecCCCEEEecCCCCHHHHHHHHHHcCCeEEEEc-ccccccCCCCHHHHHHHHHh--cCCeEcCCccccCCHHH
Confidence 4567777778832111235688888999999999999653 34221 1122222 22222 34565544432 1111
Q ss_pred ---HHHHHHHc-CcCEEEEecc-CCC--hHHHHHHHHHHHHc---CCcEE-EEcCCHHHHHHHhccCCCcEEeec-----
Q 015899 253 ---QIYYARTK-GADAVLLIAA-VLP--DLDIRYMTKICKLL---GLTAL-VEVHDEREMDRVLGIEGIELIGIN----- 316 (398)
Q Consensus 253 ---QI~eAr~~-GADaVLLiaa-iL~--~~~L~~Li~~a~~L---GL~~L-VEVht~eEl~rAl~l~Ga~iIGIN----- 316 (398)
-...++++ |++.|.|... -+. .+++.++++.++++ |+.++ ++++|.++++++.++ |+++|..-
T Consensus 81 ~~~f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~-gad~v~~~~~~~G 159 (264)
T 1xm3_A 81 AVRIARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEEL-GVHAIMPGASPIG 159 (264)
T ss_dssp HHHHHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHH-TCSCBEECSSSTT
T ss_pred HHHHHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHh-CCCEEEECCcccC
Confidence 12234555 6666655332 121 24678999999998 99999 899999999999997 99987431
Q ss_pred -cccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 317 -NRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 317 -nRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
++++. +.+....+.+. .++++|++|||++++|+.++.++|||||+||++|++.+||.+.+++|..
T Consensus 160 t~~~~~----~~~~l~~i~~~--------~~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~a~dp~~~~~~l~~ 225 (264)
T 1xm3_A 160 SGQGIL----NPLNLSFIIEQ--------AKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAMKL 225 (264)
T ss_dssp CCCCCS----CHHHHHHHHHH--------CSSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred CCCCCC----CHHHHHHHHhc--------CCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHH
Confidence 12221 23332333221 3689999999999999999999999999999999999999998888863
No 36
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=99.44 E-value=2.3e-12 Score=118.06 Aligned_cols=189 Identities=16% Similarity=0.113 Sum_probs=134.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcC----CCCHHHHHHHHhcCCCCcEEeccccCCHH-HHHHHHHcCcCEEEEeccC
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYF----KGSFENLEAVRSAGVKCPLLCKEFIVDAW-QIYYARTKGADAVLLIAAV 271 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F----~Gs~edL~~Ir~a~v~lPVL~KDFIid~~-QI~eAr~~GADaVLLiaai 271 (398)
.+..+.++.+.++|++.+++-.-++.| ..+++.++.+|+. ++.|+...=++.|+. .+..+..+|||.|.+-...
T Consensus 16 ~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~-~~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~ 94 (220)
T 2fli_A 16 ANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH-SKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTES 94 (220)
T ss_dssp GGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTT-CCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHh-CCCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCc
Confidence 367788999999999998876433333 3348999999986 688888766666663 4788889999999987654
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEc--CCHHHHHHHhccCCCcEE---eec-cccCcccccC-hhhHHHHhhhhccccccc
Q 015899 272 LPDLDIRYMTKICKLLGLTALVEV--HDEREMDRVLGIEGIELI---GIN-NRNLETFEVD-NSNTKKLLEGERGEIIRQ 344 (398)
Q Consensus 272 L~~~~L~~Li~~a~~LGL~~LVEV--ht~eEl~rAl~l~Ga~iI---GIN-nRdL~tf~vD-l~~t~~L~~~i~~~~i~~ 344 (398)
. +....+++.++..|+.+++-+ ++..|..+... .+++.| +++ ..+-.+|..+ ++...++.+... . ..
T Consensus 95 ~--~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~-~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~-~--~~ 168 (220)
T 2fli_A 95 T--RHIHGALQKIKAAGMKAGVVINPGTPATALEPLL-DLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRD-E--KG 168 (220)
T ss_dssp C--SCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGT-TTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHH-H--TT
T ss_pred c--ccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH-hhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHH-h--cC
Confidence 4 346777788888899998888 56555545554 367887 554 2232333322 122222222110 0 01
Q ss_pred CCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 345 KNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 345 ~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
.++++++.|||+ ++++..+.++|+|++.||++|++++||.+++++|..
T Consensus 169 ~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~ 216 (220)
T 2fli_A 169 LSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRT 216 (220)
T ss_dssp CCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHH
T ss_pred CCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHH
Confidence 157889999997 899999999999999999999999999999998854
No 37
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.42 E-value=1.5e-13 Score=137.56 Aligned_cols=190 Identities=16% Similarity=0.192 Sum_probs=136.3
Q ss_pred EEEeccCCCCCCCCCC--CCC---HHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEe--ccccCCHH
Q 015899 180 IAEVKKASPSRGILRE--DFD---PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC--KEFIVDAW 252 (398)
Q Consensus 180 IAEvKraSPSkG~i~~--~~d---p~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~--KDFIid~~ 252 (398)
|.|+++++|..+++.- ..| ..++++.++++|+.+|.|.+|..++++...++ |.. ..+|+.. ++|+-+++
T Consensus 114 ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~---r~~-~~~p~~~~~~~~~~~~~ 189 (370)
T 1gox_A 114 VEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADI---KNR-FVLPPFLTLKNFEGIDL 189 (370)
T ss_dssp HHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHH---HTT-CCCCTTCCCGGGSSSCC
T ss_pred HHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHH---Hhc-cCCCcccchhhhhhhhh
Confidence 4677777775555531 223 35678889999999999999999999988887 554 6788654 67766556
Q ss_pred HHHHHHHcCcCEEEEeccCCChH-HHHHHHHHHHHcCCcEEE-EcCCHHHHHHHhccCCCcEEeecc---ccCcccccCh
Q 015899 253 QIYYARTKGADAVLLIAAVLPDL-DIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGIELIGINN---RNLETFEVDN 327 (398)
Q Consensus 253 QI~eAr~~GADaVLLiaaiL~~~-~L~~Li~~a~~LGL~~LV-EVht~eEl~rAl~l~Ga~iIGINn---RdL~tf~vDl 327 (398)
|.... ..|++...++...+++. .++.+...++..++.+++ ++++.+++.++.++ |++.|.++| |.+.+...++
T Consensus 190 ~~~~~-~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~-Gad~I~vs~~ggr~~~~~~~~~ 267 (370)
T 1gox_A 190 GKMDK-ANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLAVQH-GAAGIIVSNHGARQLDYVPATI 267 (370)
T ss_dssp C----------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHHHHHT-TCSEEEECCGGGTSSTTCCCHH
T ss_pred hcccc-ccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEEEecCCHHHHHHHHHc-CCCEEEECCCCCccCCCcccHH
Confidence 55432 35776544555444432 345555556678999999 89999999999997 999999987 5555544555
Q ss_pred hhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 328 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 328 ~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
+...++.+.+ +.++++|+.|||.+++|+.++..+|||+|.||++++..
T Consensus 268 ~~l~~v~~~~------~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~ 315 (370)
T 1gox_A 268 MALEEVVKAA------QGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFS 315 (370)
T ss_dssp HHHHHHHHHT------TTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHH
T ss_pred HHHHHHHHHh------CCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHH
Confidence 5555555532 23689999999999999999999999999999999864
No 38
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.40 E-value=1.2e-12 Score=122.30 Aligned_cols=197 Identities=15% Similarity=0.171 Sum_probs=134.1
Q ss_pred CceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEe---ccC---CcCCC-----------C----HHHHHHHH
Q 015899 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSIL---TDE---KYFKG-----------S----FENLEAVR 234 (398)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVL---Td~---~~F~G-----------s----~edL~~Ir 234 (398)
+..+|+=+-...|+. .+..+.|+.++++ |++|++- +|| +.|-+ + ++.++.+|
T Consensus 4 ~~~~~~~i~~~~~~~------~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~ 76 (248)
T 1geq_A 4 DGSLIPYLTAGDPDK------QSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFR 76 (248)
T ss_dssp TTEEEEEEETTSSCH------HHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CccEEEEEeCCCCCH------HHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 446666665555542 2567899999999 9999997 222 22211 2 67888889
Q ss_pred hcCCCCcEEeccccCC------HHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEc--CCHHHHHHHhc
Q 015899 235 SAGVKCPLLCKEFIVD------AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEV--HDEREMDRVLG 306 (398)
Q Consensus 235 ~a~v~lPVL~KDFIid------~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEV--ht~eEl~rAl~ 306 (398)
+. +++||....++.+ ...+..+.++|||.|.+.. +..++...+++.++++|+.+++-+ +|..|..+++.
T Consensus 77 ~~-~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~--~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~ 153 (248)
T 1geq_A 77 RH-SSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVD--LPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVID 153 (248)
T ss_dssp TT-CCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETT--CCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHH
T ss_pred hh-CCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECC--CChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHH
Confidence 86 8999886654322 3578888999999999964 445578899999999999886655 46666655554
Q ss_pred cCCCc-EEeeccccCcc-----ccc-ChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccccc
Q 015899 307 IEGIE-LIGINNRNLET-----FEV-DNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIV 379 (398)
Q Consensus 307 l~Ga~-iIGINnRdL~t-----f~v-Dl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLm 379 (398)
. +++ +|.+-.++-.+ +.. .++...++.+. .++++++.|||++++++..+.++|+|+|+||++|+
T Consensus 154 ~-~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~--------~~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~ 224 (248)
T 1geq_A 154 D-MTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRI--------CRNKVAVGFGVSKREHVVSLLKEGANGVVVGSALV 224 (248)
T ss_dssp H-HCSSEEEEECCC-------CCCHHHHHHHHHHHHH--------CSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred h-cCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhh--------cCCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHH
Confidence 3 455 65443222111 111 12233344332 25789999999999999999999999999999999
Q ss_pred CCC--ChHHHHHhhh
Q 015899 380 KQD--DPGKGITGLF 392 (398)
Q Consensus 380 k~~--dp~~~i~~L~ 392 (398)
+.. ++ +.+++|+
T Consensus 225 ~~~~~~~-~~~~~~~ 238 (248)
T 1geq_A 225 KIIGEKG-REATEFL 238 (248)
T ss_dssp HHHHHHG-GGCHHHH
T ss_pred hhHhhCh-HHHHHHH
Confidence 873 44 5555544
No 39
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=99.39 E-value=1.3e-11 Score=117.12 Aligned_cols=182 Identities=18% Similarity=0.158 Sum_probs=134.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHH---HHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCC
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFE---NLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~e---dL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (398)
..||.++|+.|.+.||+.|+++.....+.|... -++.+.+. +.+|+-....|.+..++.....+|||.|.+.+..+
T Consensus 30 ~~dP~~~a~~~~~~gad~lhvvDld~a~~~~~~~~~~i~~i~~~-~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~ 108 (243)
T 4gj1_A 30 KYNPLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKE-VSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAI 108 (243)
T ss_dssp CCCHHHHHHHHHHHTCCEEEEEEHHHHHCGGGCCHHHHHHHHHH-CCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTT
T ss_pred CCCHHHHHHHHHHCCCCEEEEEecCcccccchhHHHHHHHHHHh-cCCCeEeccccccHHHHHHHHHcCCCEEEEccccc
Confidence 469999999999999999999998888877554 45555565 89999999999999999999999999999999988
Q ss_pred ChHH-HHHHHHHHHH----cCCcEE------EEcCC---------HHHHHHHhccCCCcEEeec--cccCcccccChhhH
Q 015899 273 PDLD-IRYMTKICKL----LGLTAL------VEVHD---------EREMDRVLGIEGIELIGIN--NRNLETFEVDNSNT 330 (398)
Q Consensus 273 ~~~~-L~~Li~~a~~----LGL~~L------VEVht---------~eEl~rAl~l~Ga~iIGIN--nRdL~tf~vDl~~t 330 (398)
.+.+ +.++.+...+ +++++. |-++. .+-+++..+. |+.-|=+| .||-+--.+|++..
T Consensus 109 ~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~-g~~eil~t~Id~DGt~~G~d~~l~ 187 (243)
T 4gj1_A 109 KDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNK-GLKHILCTDISKDGTMQGVNVRLY 187 (243)
T ss_dssp TCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTT-TCCEEEEEETTC-----CCCHHHH
T ss_pred cCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhc-CCcEEEeeeecccccccCCCHHHH
Confidence 7654 5555544321 233331 11121 3445566665 77766555 56666678899988
Q ss_pred HHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHH
Q 015899 331 KKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKG 387 (398)
Q Consensus 331 ~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~ 387 (398)
.++.+.. .++++|+.||+.+.+|+..++ .+++||+||++|+...-.-+-
T Consensus 188 ~~l~~~~-------~~ipviasGGv~~~~Dl~~l~-~~~~gvivg~Al~~g~i~l~e 236 (243)
T 4gj1_A 188 KLIHEIF-------PNICIQASGGVASLKDLENLK-GICSGVIVGKALLDGVFSVEE 236 (243)
T ss_dssp HHHHHHC-------TTSEEEEESCCCSHHHHHHTT-TTCSEEEECHHHHTTSSCHHH
T ss_pred HHHHHhc-------CCCCEEEEcCCCCHHHHHHHH-ccCchhehHHHHHCCCCCHHH
Confidence 8887641 368999999999999999985 569999999999988754333
No 40
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=99.38 E-value=1e-11 Score=115.20 Aligned_cols=190 Identities=18% Similarity=0.191 Sum_probs=133.9
Q ss_pred CHHHHHHHHHHcCCcEEEEec-cCCcCC---CCHHHHHHHHhcCCCCcEEeccccCCHH-HHHHHHHcCcCEEEEeccCC
Q 015899 198 DPVEIARSYEKGGAACLSILT-DEKYFK---GSFENLEAVRSAGVKCPLLCKEFIVDAW-QIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLT-d~~~F~---Gs~edL~~Ir~a~v~lPVL~KDFIid~~-QI~eAr~~GADaVLLiaaiL 272 (398)
+..+.++...++|+++|.+-- |..|++ .+++.++.+|+. ++.|+...=++.|+. .+..+..+|||.|.+-....
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~-~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~~ 102 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPI-TDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQS 102 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGG-CCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECSTT
T ss_pred HHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhc-cCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecCc
Confidence 567788899999999999842 444433 358899999886 677876555666664 68888999999998876511
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEc--CCHHHHHHHhccCCCcEE---eecc-ccCcccccC-hhhHHHHhhhhcccccccC
Q 015899 273 PDLDIRYMTKICKLLGLTALVEV--HDEREMDRVLGIEGIELI---GINN-RNLETFEVD-NSNTKKLLEGERGEIIRQK 345 (398)
Q Consensus 273 ~~~~L~~Li~~a~~LGL~~LVEV--ht~eEl~rAl~l~Ga~iI---GINn-RdL~tf~vD-l~~t~~L~~~i~~~~i~~~ 345 (398)
..+++.++++.++..|+.+++-+ +|..|...+.. .++++| +++. ..-.+|..+ ++...++.+.... ...
T Consensus 103 ~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~-~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~---~~~ 178 (230)
T 1rpx_A 103 STIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVL-DAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAE---RGL 178 (230)
T ss_dssp TCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTT-TTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHH---HTC
T ss_pred cchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH-hhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHh---cCC
Confidence 22456788888888999999888 45555444444 378988 6652 222233222 1222233222100 001
Q ss_pred CceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 346 NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 346 ~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
++++++.|||+ ++++..+.++|+|+|.||++|++++||.+++++|..
T Consensus 179 ~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l~~ 225 (230)
T 1rpx_A 179 NPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAPDYAEAIKGIKT 225 (230)
T ss_dssp CCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred CceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhCCCCHHHHHHHHHH
Confidence 57889999996 899999999999999999999999999999999865
No 41
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=99.35 E-value=1.2e-11 Score=113.55 Aligned_cols=173 Identities=18% Similarity=0.182 Sum_probs=119.3
Q ss_pred HHHHHHHHHHcCCcEEEEeccCCcCCCCH----HHHHHHHhc--CCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCC
Q 015899 199 PVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVLTd~~~F~Gs~----edL~~Ir~a--~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (398)
+.+.++.+.++|+++|.+- ++..-...+ +.++.+++. ..++||+..++ +..+..+|||.|.|.....
T Consensus 33 ~~~~~~~~~~~G~~~i~l~-~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~~~------~~~a~~~gad~v~l~~~~~ 105 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFR-EKGGDALTGEARIKFAEKAQAACREAGVPFIVNDD------VELALNLKADGIHIGQEDA 105 (227)
T ss_dssp HHHHHHHHHHHTCSEEEEC-CCSTTCCCHHHHHHHHHHHHHHHHHHTCCEEEESC------HHHHHHHTCSEEEECTTSS
T ss_pred HHHHHHHHHHCCCCEEEEe-cCCCCHhHHHHHHHHHHHHHHHHHHcCCeEEEcCH------HHHHHHcCCCEEEECCCcc
Confidence 8899999999999999874 221111222 333333321 13678887654 4678889999999855332
Q ss_pred ChHHHHHHHHHHHHcCC-cEEEEcCCHHHHHHHhccCCCcEEeec---cccCc---ccccChhhHHHHhhhhcccccccC
Q 015899 273 PDLDIRYMTKICKLLGL-TALVEVHDEREMDRVLGIEGIELIGIN---NRNLE---TFEVDNSNTKKLLEGERGEIIRQK 345 (398)
Q Consensus 273 ~~~~L~~Li~~a~~LGL-~~LVEVht~eEl~rAl~l~Ga~iIGIN---nRdL~---tf~vDl~~t~~L~~~i~~~~i~~~ 345 (398)
++ .+..+.+|. -+-+.+||.+|+..+.+. |+++|.+. ...-+ ....+++...++.+. . .
T Consensus 106 ---~~---~~~~~~~g~~~~~~s~~t~~e~~~a~~~-g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~-----~--~ 171 (227)
T 2tps_A 106 ---NA---KEVRAAIGDMILGVSAHTMSEVKQAEED-GADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQ-----G--I 171 (227)
T ss_dssp ---CH---HHHHHHHTTSEEEEEECSHHHHHHHHHH-TCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHT-----T--C
T ss_pred ---CH---HHHHHhcCCcEEEEecCCHHHHHHHHhC-CCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHh-----C--C
Confidence 22 233334664 344456999999999886 99999852 11111 122356666666543 1 1
Q ss_pred CceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 346 NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 346 ~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
++++++.|||+ ++++..+.++|+++|.||++|++.+||.+.+++|..
T Consensus 172 ~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~ 218 (227)
T 2tps_A 172 SIPIVGIGGIT-IDNAAPVIQAGADGVSMISAISQAEDPESAARKFRE 218 (227)
T ss_dssp CCCEEEESSCC-TTTSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHH
T ss_pred CCCEEEEcCCC-HHHHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHH
Confidence 37899999997 999999999999999999999999999888888764
No 42
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=99.35 E-value=1e-11 Score=112.84 Aligned_cols=180 Identities=18% Similarity=0.197 Sum_probs=129.6
Q ss_pred HHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCC-CCcEEe--ccccCC-HHH-HHHHHHcCcCEEEEeccCCC
Q 015899 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLC--KEFIVD-AWQ-IYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v-~lPVL~--KDFIid-~~Q-I~eAr~~GADaVLLiaaiL~ 273 (398)
..++++.... |+++|.| +++.|...+++.++.+|+. . +.|++. | +.| +.+ +..+..+|||.|.+-.. -+
T Consensus 15 ~~~~~~~~~~-~v~~iev-~~~~~~~~g~~~i~~l~~~-~~~~~i~~~l~--~~di~~~~~~~a~~~Gad~v~vh~~-~~ 88 (207)
T 3ajx_A 15 ALELAGKVAE-YVDIIEL-GTPLIKAEGLSVITAVKKA-HPDKIVFADMK--TMDAGELEADIAFKAGADLVTVLGS-AD 88 (207)
T ss_dssp HHHHHHHHGG-GCSEEEE-CHHHHHHHCTHHHHHHHHH-STTSEEEEEEE--ECSCHHHHHHHHHHTTCSEEEEETT-SC
T ss_pred HHHHHHHhhc-cCCEEEE-CcHHHHhhCHHHHHHHHHh-CCCCeEEEEEE--ecCccHHHHHHHHhCCCCEEEEecc-CC
Confidence 3455566655 7799999 6665666678899999986 5 789874 4 235 444 78889999999986442 23
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcC---CHHH-HHHHhccCCCcEEeec-cccCcccccChhhHHHHhhhhcccccccCCce
Q 015899 274 DLDIRYMTKICKLLGLTALVEVH---DERE-MDRVLGIEGIELIGIN-NRNLETFEVDNSNTKKLLEGERGEIIRQKNII 348 (398)
Q Consensus 274 ~~~L~~Li~~a~~LGL~~LVEVh---t~eE-l~rAl~l~Ga~iIGIN-nRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~ 348 (398)
+..+.++.+.+++.|+.+.+.++ |.++ ++.+.+. |+++|++. .++-.....++.. .++... . +.+++
T Consensus 89 ~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~~~-g~d~v~~~~~~~~~~~g~~~~~-~~i~~~-~-----~~~~p 160 (207)
T 3ajx_A 89 DSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRAL-GAKFVEMHAGLDEQAKPGFDLN-GLLAAG-E-----KARVP 160 (207)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHT-TCSEEEEECCHHHHTSTTCCTH-HHHHHH-H-----HHTSC
T ss_pred hHHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHh-CCCEEEEEecccccccCCCchH-HHHHHh-h-----CCCCC
Confidence 45788899999999999878886 6666 5666665 89999554 1111112223322 333222 1 11567
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 349 VVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 349 vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
+++.|||+ ++++..+.++|+|+|.||++|++++||.+++++|..
T Consensus 161 i~v~GGI~-~~~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 161 FSVAGGVK-VATIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRA 204 (207)
T ss_dssp EEEESSCC-GGGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred EEEECCcC-HHHHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHH
Confidence 99999996 899999999999999999999999999999998864
No 43
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=99.35 E-value=5.2e-12 Score=116.41 Aligned_cols=167 Identities=16% Similarity=0.118 Sum_probs=116.7
Q ss_pred HHHHHHcCCcEEEEeccCCcCCCCHHH----HHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHH
Q 015899 203 ARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (398)
Q Consensus 203 A~aY~~~GA~aISVLTd~~~F~Gs~ed----L~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~ 278 (398)
+....++|++.|.+ +++ ..+++. ++.+++. ..|. ..++++. ++..+..+|||.|.|....+....++
T Consensus 35 ~~~~~~~G~~~v~l--r~~--~~~~~~~~~~~~~l~~~--~~~~--~~l~v~~-~~~~a~~~gad~v~l~~~~~~~~~~~ 105 (221)
T 1yad_A 35 IIITIQNEVDFIHI--RER--SKSAADILKLLDLIFEG--GIDK--RKLVMNG-RVDIALFSTIHRVQLPSGSFSPKQIR 105 (221)
T ss_dssp HHHHHGGGCSEEEE--CCT--TSCHHHHHHHHHHHHHT--TCCG--GGEEEES-CHHHHHTTTCCEEEECTTSCCHHHHH
T ss_pred HHHHHHCCCCEEEE--ccC--CCCHHHHHHHHHHHHHh--cCcC--CeEEEeC-hHHHHHHcCCCEEEeCCCccCHHHHH
Confidence 56677889998876 222 134443 3334442 2331 1444443 46788999999999987665544444
Q ss_pred HHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCc-cc----ccChhhHHHHhhhhcccccccCCceEEEec
Q 015899 279 YMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLE-TF----EVDNSNTKKLLEGERGEIIRQKNIIVVGES 353 (398)
Q Consensus 279 ~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~-tf----~vDl~~t~~L~~~i~~~~i~~~~v~vVAES 353 (398)
.+. . |+.+.+.|||.+|+..+... |+++|++.+.--+ ++ ..+++...++.+. .++++++.|
T Consensus 106 ~~~----~-~~~ig~sv~t~~~~~~a~~~-gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~--------~~~pvia~G 171 (221)
T 1yad_A 106 ARF----P-HLHIGRSVHSLEEAVQAEKE-DADYVLFGHVFETDCKKGLEGRGVSLLSDIKQR--------ISIPVIAIG 171 (221)
T ss_dssp HHC----T-TCEEEEEECSHHHHHHHHHT-TCSEEEEECCC----------CHHHHHHHHHHH--------CCSCEEEES
T ss_pred HHC----C-CCEEEEEcCCHHHHHHHHhC-CCCEEEECCccccCCCCCCCCCCHHHHHHHHHh--------CCCCEEEEC
Confidence 332 2 88899999999999999996 9999999763111 11 1123333333322 267899999
Q ss_pred CCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 354 GLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 354 GI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
|| |++++..+.++|+++|.||+++++.+||.+.+++|..
T Consensus 172 GI-~~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~ 210 (221)
T 1yad_A 172 GM-TPDRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSR 210 (221)
T ss_dssp SC-CGGGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHH
Confidence 99 9999999999999999999999999999999988854
No 44
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=99.24 E-value=1.5e-10 Score=107.30 Aligned_cols=182 Identities=15% Similarity=0.139 Sum_probs=132.6
Q ss_pred eEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHH
Q 015899 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (398)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eA 257 (398)
.||+=+...+| .+..+++++..++|+.+|-+ ++..- ...+.++.+++ .++.+-. +.+++..++..|
T Consensus 14 ~ii~vi~~~~~--------~~~~~~~~~l~~gGv~~iel-~~k~~--~~~~~i~~~~~--~~~~~ga-g~vl~~d~~~~A 79 (207)
T 2yw3_A 14 RLLPLLTVRGG--------EDLLGLARVLEEEGVGALEI-TLRTE--KGLEALKALRK--SGLLLGA-GTVRSPKEAEAA 79 (207)
T ss_dssp CEEEEECCCSC--------CCHHHHHHHHHHTTCCEEEE-ECSST--HHHHHHHHHTT--SSCEEEE-ESCCSHHHHHHH
T ss_pred CEEEEEeCCCH--------HHHHHHHHHHHHcCCCEEEE-eCCCh--HHHHHHHHHhC--CCCEEEe-CeEeeHHHHHHH
Confidence 46666654433 36789999999999999975 44321 12344444443 3444444 446788999999
Q ss_pred HHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCccccc-ChhhHHHHhhh
Q 015899 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEV-DNSNTKKLLEG 336 (398)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~v-Dl~~t~~L~~~ 336 (398)
.++|||.|.+.. .+ ..+++.++.+|+..+..|||.+|+.+|.+. |+++|++-. .-.. .++....+...
T Consensus 80 ~~~GAd~v~~~~--~d----~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~-Gad~v~~fp----a~~~gG~~~lk~l~~~ 148 (207)
T 2yw3_A 80 LEAGAAFLVSPG--LL----EEVAALAQARGVPYLPGVLTPTEVERALAL-GLSALKFFP----AEPFQGVRVLRAYAEV 148 (207)
T ss_dssp HHHTCSEEEESS--CC----HHHHHHHHHHTCCEEEEECSHHHHHHHHHT-TCCEEEETT----TTTTTHHHHHHHHHHH
T ss_pred HHcCCCEEEcCC--CC----HHHHHHHHHhCCCEEecCCCHHHHHHHHHC-CCCEEEEec----CccccCHHHHHHHHhh
Confidence 999999998653 22 356778888999999999999999999997 999999932 1011 12333333322
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC---hHHHHHhhhc
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD---PGKGITGLFG 393 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d---p~~~i~~L~~ 393 (398)
+ .++++++-|||+ ++++..+.++|+++|.||++|+. +| +.+..+++..
T Consensus 149 -----~--~~ipvvaiGGI~-~~n~~~~l~aGa~~vavgSai~~-~d~~~i~~~a~~~~~ 199 (207)
T 2yw3_A 149 -----F--PEVRFLPTGGIK-EEHLPHYAALPNLLAVGGSWLLQ-GNLEAVRAKVRAAKA 199 (207)
T ss_dssp -----C--TTCEEEEBSSCC-GGGHHHHHTCSSBSCEEESGGGS-SCHHHHHHHHHHHHH
T ss_pred -----C--CCCcEEEeCCCC-HHHHHHHHhCCCcEEEEehhhhC-CCHHHHHHHHHHHHH
Confidence 1 268999999995 79999999999999999999999 78 7888877764
No 45
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=99.24 E-value=1.4e-10 Score=108.93 Aligned_cols=197 Identities=18% Similarity=0.145 Sum_probs=138.6
Q ss_pred CCCCCCCCCC-CCHHHHHHHHHHcCCcEEEEec-cCCc---CCCCHHHHHHHHhcCCCCcEEeccccCCHH-HHHHHHHc
Q 015899 187 SPSRGILRED-FDPVEIARSYEKGGAACLSILT-DEKY---FKGSFENLEAVRSAGVKCPLLCKEFIVDAW-QIYYARTK 260 (398)
Q Consensus 187 SPSkG~i~~~-~dp~~iA~aY~~~GA~aISVLT-d~~~---F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~-QI~eAr~~ 260 (398)
+||- +..+ .+..+..+...++||+.|++=. |-.| +.-.++.++.+|+. +++|+.+-=.+.||. -+..+..+
T Consensus 8 ~psi--la~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~-~~~~~~vhlmv~dp~~~i~~~~~a 84 (230)
T 1tqj_A 8 APSI--LSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPL-TKKTLDVHLMIVEPEKYVEDFAKA 84 (230)
T ss_dssp EEBG--GGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGG-CCSEEEEEEESSSGGGTHHHHHHH
T ss_pred EEEe--eecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhh-cCCcEEEEEEccCHHHHHHHHHHc
Confidence 5662 3333 3677788889999999976643 3332 23356889999986 777876444445541 25778889
Q ss_pred CcCEEEEecc--CCChHHHHHHHHHHHHcCCcEEEEc--CCHHHHHHHhccCCCcEEeeccccCcc----ccc-ChhhHH
Q 015899 261 GADAVLLIAA--VLPDLDIRYMTKICKLLGLTALVEV--HDEREMDRVLGIEGIELIGINNRNLET----FEV-DNSNTK 331 (398)
Q Consensus 261 GADaVLLiaa--iL~~~~L~~Li~~a~~LGL~~LVEV--ht~eEl~rAl~l~Ga~iIGINnRdL~t----f~v-Dl~~t~ 331 (398)
|||.|.+... .. +...++++.++..|+.+.+-+ +|..|..+.+. .++++|++-..+-.+ |.. .++...
T Consensus 85 Gadgv~vh~e~~~~--~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~-~~~D~v~~msv~pg~ggq~~~~~~~~~i~ 161 (230)
T 1tqj_A 85 GADIISVHVEHNAS--PHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVL-PVCDLILIMSVNPGFGGQSFIPEVLPKIR 161 (230)
T ss_dssp TCSEEEEECSTTTC--TTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTG-GGCSEEEEESSCC----CCCCGGGHHHHH
T ss_pred CCCEEEECcccccc--hhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHH-hcCCEEEEEEeccccCCccCcHHHHHHHH
Confidence 9999999865 43 357888999999999999988 78777666555 388999766554432 211 133333
Q ss_pred HHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 332 KLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 332 ~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
++.+..... ..++++.+-|||+. +++..+.++|+|+++||++|++++||.+++++|..
T Consensus 162 ~lr~~~~~~---~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~ 219 (230)
T 1tqj_A 162 ALRQMCDER---GLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRN 219 (230)
T ss_dssp HHHHHHHHH---TCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred HHHHHHHhc---CCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHH
Confidence 333321000 11578999999976 99999999999999999999999999999999864
No 46
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=99.22 E-value=1.1e-10 Score=110.65 Aligned_cols=173 Identities=17% Similarity=0.244 Sum_probs=134.2
Q ss_pred eEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEE-eccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHH
Q 015899 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSI-LTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYY 256 (398)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISV-LTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~e 256 (398)
.||+=+.-.+|. +..++|+++.++|+.+|-| ++.+ +..+.++.+++. +.-.++--+-+++..|+..
T Consensus 35 ~vv~Vir~~~~~--------~a~~~a~al~~gGi~~iEvt~~t~----~a~e~I~~l~~~-~~~~~iGaGTVlt~~~a~~ 101 (232)
T 4e38_A 35 KVIPVIAIDNAE--------DIIPLGKVLAENGLPAAEITFRSD----AAVEAIRLLRQA-QPEMLIGAGTILNGEQALA 101 (232)
T ss_dssp CEEEEECCSSGG--------GHHHHHHHHHHTTCCEEEEETTST----THHHHHHHHHHH-CTTCEEEEECCCSHHHHHH
T ss_pred CEEEEEEcCCHH--------HHHHHHHHHHHCCCCEEEEeCCCC----CHHHHHHHHHHh-CCCCEEeECCcCCHHHHHH
Confidence 577777655553 7899999999999999998 2322 457888888886 4334565566789999999
Q ss_pred HHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhh
Q 015899 257 ARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEG 336 (398)
Q Consensus 257 Ar~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~ 336 (398)
|..+|||.|..-. ++ .++++.|+..|+..+..|.|..|+.+|+++ |+++|.+-..... -.++..+.|..-
T Consensus 102 Ai~AGA~fIvsP~--~~----~~vi~~~~~~gi~~ipGv~TptEi~~A~~~-Gad~vK~FPa~~~---gG~~~lkal~~p 171 (232)
T 4e38_A 102 AKEAGATFVVSPG--FN----PNTVRACQEIGIDIVPGVNNPSTVEAALEM-GLTTLKFFPAEAS---GGISMVKSLVGP 171 (232)
T ss_dssp HHHHTCSEEECSS--CC----HHHHHHHHHHTCEEECEECSHHHHHHHHHT-TCCEEEECSTTTT---THHHHHHHHHTT
T ss_pred HHHcCCCEEEeCC--CC----HHHHHHHHHcCCCEEcCCCCHHHHHHHHHc-CCCEEEECcCccc---cCHHHHHHHHHH
Confidence 9999999998643 32 457788899999999999999999999998 9999998543210 123333444331
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
+ .++++++.||| +++++....++|+.++++|+.|+..
T Consensus 172 -----~--p~ip~~ptGGI-~~~n~~~~l~aGa~~~vgGs~l~~~ 208 (232)
T 4e38_A 172 -----Y--GDIRLMPTGGI-TPSNIDNYLAIPQVLACGGTWMVDK 208 (232)
T ss_dssp -----C--TTCEEEEBSSC-CTTTHHHHHTSTTBCCEEECGGGCH
T ss_pred -----h--cCCCeeeEcCC-CHHHHHHHHHCCCeEEEECchhcCh
Confidence 2 36899999999 5999999999999999999999864
No 47
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.21 E-value=9.6e-11 Score=115.66 Aligned_cols=157 Identities=17% Similarity=0.161 Sum_probs=103.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCcEEEEecc----------CCcCCCCHHHHHHHHhcCCCCcEEec--cccCCHHHHH
Q 015899 188 PSRGILREDFDPVEIARSYEKGGAACLSILTD----------EKYFKGSFENLEAVRSAGVKCPLLCK--EFIVDAWQIY 255 (398)
Q Consensus 188 PSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd----------~~~F~Gs~edL~~Ir~a~v~lPVL~K--DFIid~~QI~ 255 (398)
|..|.+...+++..+++.++..||++|.+..+ ...|.+.++.++.+|+. +++||+.| ++++++.++.
T Consensus 118 pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~-~~~Pv~vK~~~~~~~~~~a~ 196 (349)
T 1p0k_A 118 LIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSR-VSVPVIVKEVGFGMSKASAG 196 (349)
T ss_dssp CEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHH-CSSCEEEEEESSCCCHHHHH
T ss_pred eeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHH-cCCCEEEEecCCCCCHHHHH
Confidence 33333333567888999999999999999876 23455567889999987 89999999 6888999999
Q ss_pred HHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhh
Q 015899 256 YARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLE 335 (398)
Q Consensus 256 eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~ 335 (398)
.+..+|||+|.+...--+. ... ++.++..+ + ....... |. . ..+...++.+
T Consensus 197 ~a~~~Gad~I~v~~~ggt~--~~~-~e~~r~~~-----~------~~~~~~~------g~-----~----~~~~l~~v~~ 247 (349)
T 1p0k_A 197 KLYEAGAAAVDIGGYGGTN--FSK-IENLRRQR-----Q------ISFFNSW------GI-----S----TAASLAEIRS 247 (349)
T ss_dssp HHHHHTCSEEEEEC------------------C-----C------GGGGTTC------SC-----C----HHHHHHHHHH
T ss_pred HHHHcCCCEEEEcCCCCcc--hhh-HHHhhccc-----c------hhhhhcc------Cc-----c----HHHHHHHHHH
Confidence 9999999999997531110 000 12222221 0 0000010 11 1 1122233333
Q ss_pred hhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 336 GERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 336 ~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
. + .++++|+.|||.|++|+.++..+|||+|.||++++..
T Consensus 248 ~-----~--~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~ 286 (349)
T 1p0k_A 248 E-----F--PASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKA 286 (349)
T ss_dssp H-----C--TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred h-----c--CCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHH
Confidence 2 1 3689999999999999999999999999999999986
No 48
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=99.19 E-value=5e-10 Score=104.32 Aligned_cols=186 Identities=18% Similarity=0.185 Sum_probs=128.7
Q ss_pred CHHHHHHHHHHcCCcEEEEec-cCCcCCC---CHHHHHHHHhcCCCCcEEeccccCCHH-HHHHHHHcCcCEEEEeccCC
Q 015899 198 DPVEIARSYEKGGAACLSILT-DEKYFKG---SFENLEAVRSAGVKCPLLCKEFIVDAW-QIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLT-d~~~F~G---s~edL~~Ir~a~v~lPVL~KDFIid~~-QI~eAr~~GADaVLLiaaiL 272 (398)
+..+..+...++||+.|++-. |-.|+.. +++.++.+|+. ++.|+.+.=++.|+. .+..+..+|||.|.+-....
T Consensus 20 ~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~-~~~~~~v~lmv~d~~~~i~~~~~agad~v~vH~~~~ 98 (228)
T 1h1y_A 20 NLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKH-TKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVS 98 (228)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTT-CCSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGGGC
T ss_pred HHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhh-cCCcEEEEEEecCHHHHHHHHHHcCCCEEEECCCCc
Confidence 667788889999999988752 2233332 57899999986 666766544555551 27778889999998765443
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEc--CCHHHHHHHhccC--CCcEEeeccccC----cccccC-hhhHHHHhhhhcccccc
Q 015899 273 PDLDIRYMTKICKLLGLTALVEV--HDEREMDRVLGIE--GIELIGINNRNL----ETFEVD-NSNTKKLLEGERGEIIR 343 (398)
Q Consensus 273 ~~~~L~~Li~~a~~LGL~~LVEV--ht~eEl~rAl~l~--Ga~iIGINnRdL----~tf~vD-l~~t~~L~~~i~~~~i~ 343 (398)
+ ..+.+.++.++..|+.+.+-+ +|..|..+...-. ++++|++-..+- +.|... ++...++.+. .
T Consensus 99 ~-~~~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~------~ 171 (228)
T 1h1y_A 99 R-DNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKK------Y 171 (228)
T ss_dssp T-TTHHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHH------C
T ss_pred c-cHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHh------c
Confidence 2 223777888888999999988 5554433333211 678887754432 222211 2222333322 1
Q ss_pred cCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 344 QKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 344 ~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
.++++++-|||+. +++..+.++|+|+++||++|++++||.+++++|..
T Consensus 172 -~~~pi~v~GGI~~-~ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~~ 219 (228)
T 1h1y_A 172 -PSLDIEVDGGLGP-STIDVAASAGANCIVAGSSIFGAAEPGEVISALRK 219 (228)
T ss_dssp -TTSEEEEESSCST-TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHH
T ss_pred -CCCCEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHH
Confidence 2678999999965 99999999999999999999999999999988854
No 49
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.19 E-value=2.8e-10 Score=107.83 Aligned_cols=203 Identities=16% Similarity=0.262 Sum_probs=126.2
Q ss_pred CCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEec---cCCc----C---------CC-----CHHHHHHH
Q 015899 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT---DEKY----F---------KG-----SFENLEAV 233 (398)
Q Consensus 175 ~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLT---d~~~----F---------~G-----s~edL~~I 233 (398)
++..+|.=+--..|+. .+..++++.++++||++|.+-+ ||-. - +| .++.++.+
T Consensus 16 ~~~~~~~~i~~g~~~~------~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~i 89 (262)
T 1rd5_A 16 GKTAFIPYITAGDPDL------ATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREV 89 (262)
T ss_dssp TCCEEEEEEETTSSCH------HHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred CCceEEEEeeCCCCCH------HHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3446666553333331 2467789999999999999952 2111 0 11 24668888
Q ss_pred HhcCCCCcEEeccccCCHH---HHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEE--EcCC-HHHHHHHhcc
Q 015899 234 RSAGVKCPLLCKEFIVDAW---QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV--EVHD-EREMDRVLGI 307 (398)
Q Consensus 234 r~a~v~lPVL~KDFIid~~---QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LV--EVht-~eEl~rAl~l 307 (398)
|+. +++||+..++ .++. .+..+.++|||+|++. .++.+++.++++.+++.|+..+. -.++ .+.++.+...
T Consensus 90 r~~-~~~Pv~~m~~-~~~~~~~~~~~a~~aGadgv~v~--d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~ 165 (262)
T 1rd5_A 90 TPE-LSCPVVLLSY-YKPIMFRSLAKMKEAGVHGLIVP--DLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKA 165 (262)
T ss_dssp GGG-CSSCEEEECC-SHHHHSCCTHHHHHTTCCEEECT--TCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHH
T ss_pred Hhc-CCCCEEEEec-CcHHHHHHHHHHHHcCCCEEEEc--CCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhc
Confidence 886 8999876542 1221 2445889999998874 34445689999999999987633 3333 4555554543
Q ss_pred CCCcEEeeccc-cCcccccCh-hhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC---
Q 015899 308 EGIELIGINNR-NLETFEVDN-SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD--- 382 (398)
Q Consensus 308 ~Ga~iIGINnR-dL~tf~vDl-~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~--- 382 (398)
+..++.+-.. .++.-..++ ....++++.++. . .++++++.|||+|++++..+.++|||+|+||++|++..
T Consensus 166 -~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~--~--~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~~~~~~ 240 (262)
T 1rd5_A 166 -SEGFVYLVSVNGVTGPRANVNPRVESLIQEVKK--V--TNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEA 240 (262)
T ss_dssp -CCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHH--H--CSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHSS
T ss_pred -CCCeEEEecCCCCCCCCcCCCchHHHHHHHHHh--h--cCCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhHHHhc
Confidence 3344433221 111111111 122233333221 1 25789999999999999999999999999999999764
Q ss_pred -ChHH---HHHhhh
Q 015899 383 -DPGK---GITGLF 392 (398)
Q Consensus 383 -dp~~---~i~~L~ 392 (398)
++.. .+++|+
T Consensus 241 ~~~~~~~~~~~~~~ 254 (262)
T 1rd5_A 241 ASPKQGLRRLEEYA 254 (262)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHH
Confidence 4433 555554
No 50
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.19 E-value=3e-10 Score=108.74 Aligned_cols=190 Identities=17% Similarity=0.184 Sum_probs=121.1
Q ss_pred CCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEec---cCC----cC--------------CCCHHHHHHH
Q 015899 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT---DEK----YF--------------KGSFENLEAV 233 (398)
Q Consensus 175 ~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLT---d~~----~F--------------~Gs~edL~~I 233 (398)
++..+|.=+=-..|+. ....++++.++++||++|.+-+ ||- +- ...++.++.+
T Consensus 15 ~~~~~i~~i~~gdp~~------~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~i 88 (268)
T 1qop_A 15 REGAFVPFVTLGDPGI------EQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAII 88 (268)
T ss_dssp TCCEEEEEEETTSSCH------HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCceEEEEeeCCCCCH------HHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3456776664444433 1457889999999999999943 111 00 1124668888
Q ss_pred HhcCCCCcEEec---c--ccCC-HHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEE--E-EcCCHHHHHHH
Q 015899 234 RSAGVKCPLLCK---E--FIVD-AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTAL--V-EVHDEREMDRV 304 (398)
Q Consensus 234 r~a~v~lPVL~K---D--FIid-~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~L--V-EVht~eEl~rA 304 (398)
|+..+++||+.- + |+.. ..-+..+..+|||+|++- .++.+++..+++.+++.|+... + ..++.+.++..
T Consensus 89 r~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~--d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i 166 (268)
T 1qop_A 89 REKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVA--DVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQV 166 (268)
T ss_dssp HHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEET--TCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHH
T ss_pred HhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEc--CCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHH
Confidence 875368998541 1 1111 234667889999998774 4555678999999999998752 2 33556666665
Q ss_pred hccCCCcEEee-ccccCcc----cccC-hhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccc
Q 015899 305 LGIEGIELIGI-NNRNLET----FEVD-NSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 378 (398)
Q Consensus 305 l~l~Ga~iIGI-NnRdL~t----f~vD-l~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 378 (398)
... +..++-+ .-..++. +..+ .+...++.+. .+++++..+||+|++++.++..+|||+|+||++|
T Consensus 167 ~~~-~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~--------~~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai 237 (268)
T 1qop_A 167 ASY-GRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEY--------HAAPALQGFGISSPEQVSAAVRAGAAGAISGSAI 237 (268)
T ss_dssp HHH-CCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHT--------TCCCEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred Hhh-CCCcEEEEecCCcCCCccCCCchHHHHHHHHHhc--------cCCcEEEECCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 554 2222211 1112221 2222 2333344332 2578999999999999999999999999999999
Q ss_pred cCC
Q 015899 379 VKQ 381 (398)
Q Consensus 379 mk~ 381 (398)
++.
T Consensus 238 ~~~ 240 (268)
T 1qop_A 238 VKI 240 (268)
T ss_dssp HHH
T ss_pred hhh
Confidence 876
No 51
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=99.16 E-value=7.3e-10 Score=104.31 Aligned_cols=193 Identities=16% Similarity=0.192 Sum_probs=138.9
Q ss_pred CCCCCCCCCCC-CHHHHHHHHHHcCCcEEEE-eccCCc---CCCCHHHHHHHHhc-CCCCcEEeccccCCHH-HHHHHHH
Q 015899 187 SPSRGILREDF-DPVEIARSYEKGGAACLSI-LTDEKY---FKGSFENLEAVRSA-GVKCPLLCKEFIVDAW-QIYYART 259 (398)
Q Consensus 187 SPSkG~i~~~~-dp~~iA~aY~~~GA~aISV-LTd~~~---F~Gs~edL~~Ir~a-~v~lPVL~KDFIid~~-QI~eAr~ 259 (398)
||| ++.-|+ +..+-.+..+++||+.+++ +-|..| +.-++.-++.+|+. +.++|+-+.=.+-+|. -+..+..
T Consensus 8 ~ps--il~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~ 85 (228)
T 3ovp_A 8 GPS--ILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAV 85 (228)
T ss_dssp EEB--CTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHH
T ss_pred eee--heeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHH
Confidence 577 566555 5677788889999999999 445555 45678999999986 2478886654555554 3666788
Q ss_pred cCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHHHHhccCCCcEEeeccc--cC--ccccc-ChhhHH
Q 015899 260 KGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLGIEGIELIGINNR--NL--ETFEV-DNSNTK 331 (398)
Q Consensus 260 ~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~rAl~l~Ga~iIGINnR--dL--~tf~v-Dl~~t~ 331 (398)
+|||.|.+-..... ++.++++.+++.|+.+.+-++ +.+.++..+. .+++|-+-.. .. ..|.. .++...
T Consensus 86 aGad~itvH~Ea~~--~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~--~~D~Vl~msv~pGf~Gq~f~~~~l~ki~ 161 (228)
T 3ovp_A 86 AGANQYTFHLEATE--NPGALIKDIRENGMKVGLAIKPGTSVEYLAPWAN--QIDMALVMTVEPGFGGQKFMEDMMPKVH 161 (228)
T ss_dssp HTCSEEEEEGGGCS--CHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGG--GCSEEEEESSCTTTCSCCCCGGGHHHHH
T ss_pred cCCCEEEEccCCch--hHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhc--cCCeEEEeeecCCCCCcccCHHHHHHHH
Confidence 99999999875543 578899999999999999987 3444444333 3576644222 22 22322 133334
Q ss_pred HHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 332 KLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 332 ~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
+|.+. . .++.+..-||| +++.+..+.++|||.+++|++|++++||.+++++|..
T Consensus 162 ~lr~~-----~--~~~~I~VdGGI-~~~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~ 215 (228)
T 3ovp_A 162 WLRTQ-----F--PSLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215 (228)
T ss_dssp HHHHH-----C--TTCEEEEESSC-STTTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHH
T ss_pred HHHHh-----c--CCCCEEEeCCc-CHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHH
Confidence 44332 1 25678899999 6999999999999999999999999999999988864
No 52
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=99.15 E-value=3.5e-10 Score=108.03 Aligned_cols=197 Identities=19% Similarity=0.212 Sum_probs=140.1
Q ss_pred CCCCCCCCCCCC-CHHHHHHHHHHcCCcEEEE-eccCCc---CCCCHHHHHHHHhcCC-CCcEEeccccCCHH-HHHHHH
Q 015899 186 ASPSRGILREDF-DPVEIARSYEKGGAACLSI-LTDEKY---FKGSFENLEAVRSAGV-KCPLLCKEFIVDAW-QIYYAR 258 (398)
Q Consensus 186 aSPSkG~i~~~~-dp~~iA~aY~~~GA~aISV-LTd~~~---F~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~-QI~eAr 258 (398)
-||| ++.-|+ +..+-.+..+++||+.+++ +-|..| +.=++.-++.+|+. + ++|+.+.=-+.+|. -+..+.
T Consensus 30 i~pS--ilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~-~p~~~ldvHLmv~~p~~~i~~~~ 106 (246)
T 3inp_A 30 INPS--ILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDY-GITAGMDVHLMVKPVDALIESFA 106 (246)
T ss_dssp EEEB--GGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHH-TCCSCEEEEEECSSCHHHHHHHH
T ss_pred eehh--hhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHh-CCCCeEEEEEeeCCHHHHHHHHH
Confidence 4788 566555 4778888899999999998 344444 45578999999997 6 89986644455554 366778
Q ss_pred HcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHHHHhccCCCcEEee---c-cccCcccccC-hhhH
Q 015899 259 TKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLGIEGIELIGI---N-NRNLETFEVD-NSNT 330 (398)
Q Consensus 259 ~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~rAl~l~Ga~iIGI---N-nRdL~tf~vD-l~~t 330 (398)
.+|||.|.+-....+ ++.+.++.+++.|+.+-+.++ ..+.++..+. ..++|-+ | ...-..|..+ ++..
T Consensus 107 ~aGAd~itvH~Ea~~--~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~--~vD~VlvMsV~PGfgGQ~fi~~~l~KI 182 (246)
T 3inp_A 107 KAGATSIVFHPEASE--HIDRSLQLIKSFGIQAGLALNPATGIDCLKYVES--NIDRVLIMSVNPGFGGQKFIPAMLDKA 182 (246)
T ss_dssp HHTCSEEEECGGGCS--CHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGG--GCSEEEEECSCTTC--CCCCTTHHHHH
T ss_pred HcCCCEEEEccccch--hHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHh--cCCEEEEeeecCCCCCcccchHHHHHH
Confidence 999999999876653 588899999999999999986 3333333333 4676643 3 1122233332 3444
Q ss_pred HHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 331 KKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 331 ~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
.+|.+.+... ..++.+..-|||+ ++.+..+.++|||.+++|++|++++||.+++++|..
T Consensus 183 ~~lr~~~~~~---~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~ 241 (246)
T 3inp_A 183 KEISKWISST---DRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRD 241 (246)
T ss_dssp HHHHHHHHHH---TSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHH
T ss_pred HHHHHHHHhc---CCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHH
Confidence 4444331100 1246788999995 899999999999999999999999999999988754
No 53
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=99.13 E-value=1.4e-09 Score=101.37 Aligned_cols=175 Identities=11% Similarity=0.136 Sum_probs=129.2
Q ss_pred eEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHH
Q 015899 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (398)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eA 257 (398)
.||+=+..-+|. +..+++++..++|+.+|-+ |+.. .+..+-++.+++..-++ ++.-+.+++..++..|
T Consensus 17 ~~i~v~r~~~~~--------~~~~~~~al~~gGv~~iel-~~k~--~~~~~~i~~l~~~~~~~-~vgagtvi~~d~~~~A 84 (214)
T 1wbh_A 17 PVVPVIVVKKLE--------HAVPMAKALVAGGVRVLNV-TLRT--ECAVDAIRAIAKEVPEA-IVGAGTVLNPQQLAEV 84 (214)
T ss_dssp SEEEEECCSSGG--------GHHHHHHHHHHTTCCEEEE-ESCS--TTHHHHHHHHHHHCTTS-EEEEESCCSHHHHHHH
T ss_pred CEEEEEECCCHH--------HHHHHHHHHHHcCCCEEEE-eCCC--hhHHHHHHHHHHHCcCC-EEeeCEEEEHHHHHHH
Confidence 477766554443 5778999999999998876 4433 23456677676651233 3344567899999999
Q ss_pred HHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCccccc-ChhhHHHHhhh
Q 015899 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEV-DNSNTKKLLEG 336 (398)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~v-Dl~~t~~L~~~ 336 (398)
.++|||.|.+.. .+ ....+.++.+|+..+..|||.+|+.+|.+. |+++|++-. .-.. .++....+...
T Consensus 85 ~~aGAd~v~~p~--~d----~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~-Gad~v~~Fp----a~~~gG~~~lk~i~~~ 153 (214)
T 1wbh_A 85 TEAGAQFAISPG--LT----EPLLKAATEGTIPLIPGISTVSELMLGMDY-GLKEFKFFP----AEANGGVKALQAIAGP 153 (214)
T ss_dssp HHHTCSCEEESS--CC----HHHHHHHHHSSSCEEEEESSHHHHHHHHHT-TCCEEEETT----TTTTTHHHHHHHHHTT
T ss_pred HHcCCCEEEcCC--CC----HHHHHHHHHhCCCEEEecCCHHHHHHHHHC-CCCEEEEec----CccccCHHHHHHHhhh
Confidence 999999998653 22 457788889999999999999999999997 999999921 1111 13333344332
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHHc-CCCEEEEcccccCCCCh
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEA-GVKAVLVGESIVKQDDP 384 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~-GadaVLVGeaLmk~~dp 384 (398)
+ .++++++-||| |++++..+.++ |+++|- |++|++.+++
T Consensus 154 -----~--~~ipvvaiGGI-~~~n~~~~l~agg~~~v~-gS~i~~~~~~ 193 (214)
T 1wbh_A 154 -----F--SQVRFCPTGGI-SPANYRDYLALKSVLCIG-GSWLVPADAL 193 (214)
T ss_dssp -----C--TTCEEEEBSSC-CTTTHHHHHTSTTBSCEE-EGGGSCHHHH
T ss_pred -----C--CCCeEEEECCC-CHHHHHHHHhcCCCeEEE-eccccChhhh
Confidence 1 26899999999 78999999999 999999 9999987653
No 54
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.10 E-value=1.2e-09 Score=109.48 Aligned_cols=170 Identities=16% Similarity=0.182 Sum_probs=117.0
Q ss_pred HHHHHHHH-HcCCcEEEEeccCCcCCCCHH----HHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCCh
Q 015899 200 VEIARSYE-KGGAACLSILTDEKYFKGSFE----NLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (398)
Q Consensus 200 ~~iA~aY~-~~GA~aISVLTd~~~F~Gs~e----dL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~ 274 (398)
.++|.+.. ++|...|+ .. -+.+ .++.+|+. .++|+-..-++-+..++..+.++|||.|.|..+.-..
T Consensus 59 ~~lA~avA~~GGlgii~-----~~--~s~e~~~~~I~~vk~~-~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~~ 130 (361)
T 3khj_A 59 HLMAVGMARLGGIGIIH-----KN--MDMESQVNEVLKVKNS-GGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHS 130 (361)
T ss_dssp HHHHHHHHHTTCEEEEC-----SS--SCHHHHHHHHHHHHHT-TCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCSB
T ss_pred HHHHHHHHHcCCCeEEe-----cC--CCHHHHHHHHHHHHhc-cCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCCc
Confidence 37777655 45544443 11 2343 34455554 6788765555545667788889999999998766544
Q ss_pred HHHHHHHHHHHH-cCCcEEE-EcCCHHHHHHHhccCCCcEEeec--------cccCccc-ccChhhHHHHhhhhcccccc
Q 015899 275 LDIRYMTKICKL-LGLTALV-EVHDEREMDRVLGIEGIELIGIN--------NRNLETF-EVDNSNTKKLLEGERGEIIR 343 (398)
Q Consensus 275 ~~L~~Li~~a~~-LGL~~LV-EVht~eEl~rAl~l~Ga~iIGIN--------nRdL~tf-~vDl~~t~~L~~~i~~~~i~ 343 (398)
..+.+.++..++ +++.+++ .|+|.++++.+.++ |++.|.+. .|.+..+ ..++....++.... .
T Consensus 131 ~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~a-GaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~-----~ 204 (361)
T 3khj_A 131 LNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIEN-GADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVA-----S 204 (361)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHT-TCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHH-----H
T ss_pred HHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHc-CcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHH-----h
Confidence 455566665554 5999997 99999999999997 99988773 1222222 12333333443221 1
Q ss_pred cCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 344 QKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 344 ~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
..++++|+.|||.+++|+.++..+||++|.||++|+..++
T Consensus 205 ~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t~E 244 (361)
T 3khj_A 205 KFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEE 244 (361)
T ss_dssp HHTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTT
T ss_pred hcCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCc
Confidence 1368999999999999999999999999999999998765
No 55
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.10 E-value=4.1e-10 Score=118.27 Aligned_cols=182 Identities=19% Similarity=0.195 Sum_probs=126.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcCCCC-HHH---HHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccC
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGS-FEN---LEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs-~ed---L~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (398)
..+..+..+...++|+.+|.+- ++..-... .+. |..+.+. .+.|++-.|. +..|.+.|||+|.|...-
T Consensus 24 ~~~l~~~ve~al~~Gv~~vQlR-~K~~~~~~~~~~a~~l~~l~~~-~~v~liIND~------~dlA~~~gAdGVHLgq~d 95 (540)
T 3nl6_A 24 GKTLYGQVEAGLQNGVTLVQIR-EKDADTKFFIEEALQIKELCHA-HNVPLIINDR------IDVAMAIGADGIHVGQDD 95 (540)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEC-CSSSCTTHHHHHHHHHHHHHHH-TTCCEEECSC------SHHHHHTTCSEEEECTTS
T ss_pred cchHHHHHHHHHHCCCCEEEEe-cCCCCHHHHHHHHHHHHHHHHh-cCCEEEEeCc------HHHHHHcCCCEEEEChhh
Confidence 4578888888899999999873 22211111 112 2222333 4788887774 455778999999999888
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCC---CcEEeeccccCcccccC-------hhhHHHHhhhhcccc
Q 015899 272 LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEG---IELIGINNRNLETFEVD-------NSNTKKLLEGERGEI 341 (398)
Q Consensus 272 L~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~G---a~iIGINnRdL~tf~vD-------l~~t~~L~~~i~~~~ 341 (398)
++..+.++++ ..++-+-+-|||.+|+.+|.+. | +|+||+..---+.-+.+ ++...++...+...
T Consensus 96 l~~~~ar~~l----g~~~iiG~S~ht~eea~~A~~~-G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~- 169 (540)
T 3nl6_A 96 MPIPMIRKLV----GPDMVIGWSVGFPEEVDELSKM-GPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERN- 169 (540)
T ss_dssp SCHHHHHHHH----CTTSEEEEEECSHHHHHHHHHT-CC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHT-
T ss_pred cCHHHHHHHh----CCCCEEEEECCCHHHHHHHHHc-CCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhh-
Confidence 8755444443 2356667779999999999997 9 99999975422222222 34444554431100
Q ss_pred cccCCceEEEecCCCCHHHHHHHHH--------cCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 342 IRQKNIIVVGESGLFTPDDIAYVQE--------AGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 342 i~~~~v~vVAESGI~t~eD~~~l~~--------~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
...++++|+.||| +++++..+.. +|+++|.|+++||.++||.+++++|..
T Consensus 170 -~~~~iPvvAIGGI-~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~dp~~a~~~l~~ 227 (540)
T 3nl6_A 170 -NAHWCRTVGIGGL-HPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRG 227 (540)
T ss_dssp -TCTTCEEEEESSC-CTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTCTTHHHHHHHHHH
T ss_pred -ccCCCCEEEEcCC-CHHHHHHHHHhhcccccccCceEEEEeHHHhcCCCHHHHHHHHHH
Confidence 0126899999999 8999999998 899999999999999999999988854
No 56
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.09 E-value=1e-09 Score=111.45 Aligned_cols=127 Identities=17% Similarity=0.223 Sum_probs=96.5
Q ss_pred HHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHH-cCCcEEE-EcCCHHHHHHHhccCCCcEEeec--------cccC
Q 015899 251 AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKL-LGLTALV-EVHDEREMDRVLGIEGIELIGIN--------NRNL 320 (398)
Q Consensus 251 ~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~-LGL~~LV-EVht~eEl~rAl~l~Ga~iIGIN--------nRdL 320 (398)
..++..+.++|+|.|.++++.-.+..+.++++..++ +|+.+++ .|+|.++++.+.++ |++.|.+. .|++
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~a-GAD~I~vG~g~Gs~~~tr~~ 224 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIEN-GADGIKVGIGPGSICTTRIV 224 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHT-TCSEEEECC---------CC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHc-CCCEEEEeCCCCcCcccccc
Confidence 456778889999999998776555566777777665 5999997 99999999999997 99998873 2333
Q ss_pred cccc-cChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 321 ETFE-VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 321 ~tf~-vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
.... .++....++.+.. ...++++|+.|||.+++|+.++..+||++|.||++|+..+.
T Consensus 225 ~g~g~p~~~al~~v~~~~-----~~~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~t~E 283 (400)
T 3ffs_A 225 AGVGVPQITAIEKCSSVA-----SKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEE 283 (400)
T ss_dssp SCBCCCHHHHHHHHHHHH-----TTTTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTBTT
T ss_pred cccchhHHHHHHHHHHHH-----HhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhcCCC
Confidence 2222 2344444444331 12368999999999999999999999999999999998754
No 57
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=99.08 E-value=1.1e-10 Score=108.14 Aligned_cols=183 Identities=17% Similarity=0.147 Sum_probs=126.7
Q ss_pred HHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE--eccccCCHHHHHHHHHcCcCEEEEeccCCChHH
Q 015899 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD 276 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~ 276 (398)
..++++.. .+|++.+-+-+ +.++..+++.++.+|+...+.||+ .|=.-.+.+.+..+..+|||.|.+-... .++.
T Consensus 21 ~~~~~~~~-~~~vd~ie~g~-~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~-~~~~ 97 (218)
T 3jr2_A 21 AVAVASNV-ASYVDVIEVGT-ILAFAEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAA-HIAT 97 (218)
T ss_dssp HHHHHHHH-GGGCSEEEECH-HHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTS-CHHH
T ss_pred HHHHHHHh-cCCceEEEeCc-HHHHhcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCC-CHHH
Confidence 34555554 56788888744 223334678899998852366765 2222234567788899999999886533 2345
Q ss_pred HHHHHHHHHHcCCcEEEE---cCCHHHHHHHhccCCCcEEeec-cccCcc--cccChhhHHHHhhhhcccccccCCceEE
Q 015899 277 IRYMTKICKLLGLTALVE---VHDEREMDRVLGIEGIELIGIN-NRNLET--FEVDNSNTKKLLEGERGEIIRQKNIIVV 350 (398)
Q Consensus 277 L~~Li~~a~~LGL~~LVE---Vht~eEl~rAl~l~Ga~iIGIN-nRdL~t--f~vDl~~t~~L~~~i~~~~i~~~~v~vV 350 (398)
++++++.+++.|+.+.++ +.|.+++..+.+. |++.+++. ..+-.. .....+...++.+. . ..+++++
T Consensus 98 ~~~~~~~~~~~g~~~~~d~l~~~T~~~~~~~~~~-g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~-~-----~~~~pi~ 170 (218)
T 3jr2_A 98 IAACKKVADELNGEIQIEIYGNWTMQDAKAWVDL-GITQAIYHRSRDAELAGIGWTTDDLDKMRQL-S-----ALGIELS 170 (218)
T ss_dssp HHHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHT-TCCEEEEECCHHHHHHTCCSCHHHHHHHHHH-H-----HTTCEEE
T ss_pred HHHHHHHHHHhCCccceeeeecCCHHHHHHHHHc-CccceeeeeccccccCCCcCCHHHHHHHHHH-h-----CCCCCEE
Confidence 889999999999998664 4688899999887 99988763 111100 01122222223221 1 1357899
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 351 GESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 351 AESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
+.||| +++.+..+.++|||+++||++|++++||.+++ +|..
T Consensus 171 v~GGI-~~~~~~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~ 211 (218)
T 3jr2_A 171 ITGGI-VPEDIYLFEGIKTKTFIAGRALAGAEGQQTAA-ALRE 211 (218)
T ss_dssp EESSC-CGGGGGGGTTSCEEEEEESGGGSHHHHHHHHH-HHHH
T ss_pred EECCC-CHHHHHHHHHcCCCEEEEchhhcCCCCHHHHH-HHHH
Confidence 99999 69999999999999999999999999999988 7753
No 58
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=99.07 E-value=1.1e-09 Score=106.62 Aligned_cols=187 Identities=15% Similarity=0.153 Sum_probs=131.5
Q ss_pred HHHHHHHHcCCcEEEEeccCCcCC------------CCHHH-----HHHHHhcCCCCcEEeccccCCHH----H-HHHHH
Q 015899 201 EIARSYEKGGAACLSILTDEKYFK------------GSFEN-----LEAVRSAGVKCPLLCKEFIVDAW----Q-IYYAR 258 (398)
Q Consensus 201 ~iA~aY~~~GA~aISVLTd~~~F~------------Gs~ed-----L~~Ir~a~v~lPVL~KDFIid~~----Q-I~eAr 258 (398)
-.|+..+++||+-|=++.--.|-. |+-.+ -++|--..-++||++.=.-.||+ . +.+.+
T Consensus 39 lsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk 118 (286)
T 2p10_A 39 LSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELK 118 (286)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHH
T ss_pred hhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHH
Confidence 579999999999998864333311 22111 11222221288999763234443 3 45668
Q ss_pred HcCcCEEEEecc----------------CCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccc----
Q 015899 259 TKGADAVLLIAA----------------VLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNR---- 318 (398)
Q Consensus 259 ~~GADaVLLiaa----------------iL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnR---- 318 (398)
++|+.+| +... -++-++..++++.|+++||..++.|.|++|...+.++ |+|+|-+..-
T Consensus 119 ~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~a-gpDiI~~h~glT~g 196 (286)
T 2p10_A 119 EIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKA-GADILVCHMGLTTG 196 (286)
T ss_dssp HHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHH-TCSEEEEECSCC--
T ss_pred HhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHc-CCCEEEECCCCCCC
Confidence 9999999 7776 1345678899999999999999999999999999998 9999987632
Q ss_pred cCcc--cccChhh----HHHHhhhhcccccccCCceEEEec-CCCCHHHHHHHHHc--CCCEEEEcccccCCCChHHHHH
Q 015899 319 NLET--FEVDNSN----TKKLLEGERGEIIRQKNIIVVGES-GLFTPDDIAYVQEA--GVKAVLVGESIVKQDDPGKGIT 389 (398)
Q Consensus 319 dL~t--f~vDl~~----t~~L~~~i~~~~i~~~~v~vVAES-GI~t~eD~~~l~~~--GadaVLVGeaLmk~~dp~~~i~ 389 (398)
.+-. -.++++. ..++.+.++. + .+++++++-+ ||.+|+|+.++.+. |++|++.++++.|.+ |.++|+
T Consensus 197 glIG~~~avs~~~~~e~i~~i~~a~~~--v-npdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASsier~p-~e~ai~ 272 (286)
T 2p10_A 197 GAIGARSGKSMDDCVSLINECIEAART--I-RDDIIILSHGGPIANPEDARFILDSCQGCHGFYGASSMERLP-AEEAIR 272 (286)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHH--H-CSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHHHHHHH-HHHHHH
T ss_pred CcccCCCcccHHHhHHHHHHHHHHHHH--h-CCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehhhhcCC-HHHHHH
Confidence 1111 1223333 3333333221 2 2466777666 99999999999999 999999999999999 999999
Q ss_pred hhhc
Q 015899 390 GLFG 393 (398)
Q Consensus 390 ~L~~ 393 (398)
++..
T Consensus 273 ~~~~ 276 (286)
T 2p10_A 273 SQTL 276 (286)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
No 59
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=99.06 E-value=1.8e-09 Score=103.12 Aligned_cols=200 Identities=18% Similarity=0.146 Sum_probs=123.8
Q ss_pred CceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCC------------------------CHHHHH
Q 015899 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKG------------------------SFENLE 231 (398)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~G------------------------s~edL~ 231 (398)
+..+|.=+=.-.|+. ....++++.++++||++|=+-+ .|.. -++.++
T Consensus 16 ~~~~i~~i~~g~p~~------~~~~~~~~~l~~~G~D~IElG~---P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~ 86 (262)
T 2ekc_A 16 EKALVSYLMVGYPDY------ETSLKAFKEVLKNGTDILEIGF---PFSDPVADGPTIQVAHEVALKNGIRFEDVLELSE 86 (262)
T ss_dssp BCEEEEEEETTSSCH------HHHHHHHHHHHHTTCSEEEEEC---CCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CceEEEEecCCCCCh------HHHHHHHHHHHHcCCCEEEECC---CCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 346666663444443 2457899999999999999843 2211 235578
Q ss_pred HHHhcCC-CCcEEeccccC--C----HHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcE--EEEc-CCHHHH
Q 015899 232 AVRSAGV-KCPLLCKEFIV--D----AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTA--LVEV-HDEREM 301 (398)
Q Consensus 232 ~Ir~a~v-~lPVL~KDFIi--d----~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~--LVEV-ht~eEl 301 (398)
.+|+. + ++|++.-.+.- . +.-+..+.++|+|++++- -++.+++.++++.+++.|++. ++.- ++.+.+
T Consensus 87 ~ir~~-~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~--dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl 163 (262)
T 2ekc_A 87 TLRKE-FPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVP--DLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRI 163 (262)
T ss_dssp HHHHH-CTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECT--TCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHH
T ss_pred HHHhh-cCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEEC--CCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHH
Confidence 88886 7 89987631110 1 123456889999998773 566778999999999999875 3333 455555
Q ss_pred HHHhcc-CCCcEEeeccccCcccccCh--hhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccc
Q 015899 302 DRVLGI-EGIELIGINNRNLETFEVDN--SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 378 (398)
Q Consensus 302 ~rAl~l-~Ga~iIGINnRdL~tf~vDl--~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 378 (398)
...... .|+ +.-+.-...+...... ....++++.++. . .++++...+||+|++++.. ...|||+|+||++|
T Consensus 164 ~~ia~~a~gf-iy~vs~~g~TG~~~~~~~~~~~~~v~~vr~--~--~~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai 237 (262)
T 2ekc_A 164 KLICEAADEM-TYFVSVTGTTGAREKLPYERIKKKVEEYRE--L--CDKPVVVGFGVSKKEHARE-IGSFADGVVVGSAL 237 (262)
T ss_dssp HHHHHHCSSC-EEEESSCC---------CHHHHHHHHHHHH--H--CCSCEEEESSCCSHHHHHH-HHTTSSEEEECHHH
T ss_pred HHHHHhCCCC-EEEEecCCccCCCCCcCcccHHHHHHHHHh--h--cCCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHH
Confidence 554443 233 2121111111111111 112233333221 1 2567889999999999999 56789999999999
Q ss_pred cCC--CChHHHHHhhhc
Q 015899 379 VKQ--DDPGKGITGLFG 393 (398)
Q Consensus 379 mk~--~dp~~~i~~L~~ 393 (398)
++. +++...+++|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~ 254 (262)
T 2ekc_A 238 VKLAGQKKIEDLGNLVK 254 (262)
T ss_dssp HHHHHTTCHHHHHHHHH
T ss_pred HhhhhhhhHHHHHHHHH
Confidence 987 556667777653
No 60
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=99.05 E-value=3.6e-09 Score=99.47 Aligned_cols=174 Identities=17% Similarity=0.222 Sum_probs=126.2
Q ss_pred eEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHH
Q 015899 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (398)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eA 257 (398)
.||+=+.-.++ .+..+++++..++|+.+|=+ |+.. ....+.++.+++..-++-+- -+.+++..|+..|
T Consensus 18 ~ii~vir~~~~--------~~~~~~~~al~~gGv~~iel-~~k~--~~~~~~i~~l~~~~~~l~vg-aGtvl~~d~~~~A 85 (224)
T 1vhc_A 18 KIVPVIALDNA--------DDILPLADTLAKNGLSVAEI-TFRS--EAAADAIRLLRANRPDFLIA-AGTVLTAEQVVLA 85 (224)
T ss_dssp CEEEEECCSSG--------GGHHHHHHHHHHTTCCEEEE-ETTS--TTHHHHHHHHHHHCTTCEEE-EESCCSHHHHHHH
T ss_pred CeEEEEeCCCH--------HHHHHHHHHHHHcCCCEEEE-eccC--chHHHHHHHHHHhCcCcEEe-eCcEeeHHHHHHH
Confidence 46665544333 35788999999999998877 4443 23456677676651233333 3456789999999
Q ss_pred HHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCccccc-ChhhHHHHhhh
Q 015899 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEV-DNSNTKKLLEG 336 (398)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~v-Dl~~t~~L~~~ 336 (398)
.++|||.|.+.. . + ..+++.|+.+|...+..|+|.+|+.+|.++ |+++|++-. .-.. .++...++...
T Consensus 86 ~~aGAd~v~~p~--~-d---~~v~~~ar~~g~~~i~Gv~t~~e~~~A~~~-Gad~vk~Fp----a~~~gG~~~lk~l~~~ 154 (224)
T 1vhc_A 86 KSSGADFVVTPG--L-N---PKIVKLCQDLNFPITPGVNNPMAIEIALEM-GISAVKFFP----AEASGGVKMIKALLGP 154 (224)
T ss_dssp HHHTCSEEECSS--C-C---HHHHHHHHHTTCCEECEECSHHHHHHHHHT-TCCEEEETT----TTTTTHHHHHHHHHTT
T ss_pred HHCCCCEEEECC--C-C---HHHHHHHHHhCCCEEeccCCHHHHHHHHHC-CCCEEEEee----CccccCHHHHHHHHhh
Confidence 999999997653 2 2 456778889999999999999999999997 999999922 1011 13333444332
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHHc-CCCEEEEcccccCCCC
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEA-GVKAVLVGESIVKQDD 383 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~-GadaVLVGeaLmk~~d 383 (398)
+ .++++++-||| +++++..+.++ |+++|- |++|+++++
T Consensus 155 -----~--~~ipvvaiGGI-~~~N~~~~l~agga~~v~-gS~i~~~~~ 193 (224)
T 1vhc_A 155 -----Y--AQLQIMPTGGI-GLHNIRDYLAIPNIVACG-GSWFVEKKL 193 (224)
T ss_dssp -----T--TTCEEEEBSSC-CTTTHHHHHTSTTBCCEE-ECGGGCHHH
T ss_pred -----C--CCCeEEEECCc-CHHHHHHHHhcCCCEEEE-EchhcCcch
Confidence 1 26899999999 78999999999 999998 999998643
No 61
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=99.05 E-value=1.3e-09 Score=102.58 Aligned_cols=173 Identities=12% Similarity=0.111 Sum_probs=125.0
Q ss_pred eEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHH
Q 015899 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (398)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eA 257 (398)
.||+=+...++ .+..+++++..++|+.+|=+ |+.. .+..+.++.+++..-++-+-. +.+++..++..|
T Consensus 27 ~ii~V~r~~~~--------~~~~~~~~al~~gGv~~iel-~~k~--~~~~~~i~~l~~~~~~~~iga-gtvl~~d~~~~A 94 (225)
T 1mxs_A 27 RILPVITIARE--------EDILPLADALAAGGIRTLEV-TLRS--QHGLKAIQVLREQRPELCVGA-GTVLDRSMFAAV 94 (225)
T ss_dssp SEEEEECCSCG--------GGHHHHHHHHHHTTCCEEEE-ESSS--THHHHHHHHHHHHCTTSEEEE-ECCCSHHHHHHH
T ss_pred CEEEEEeCCCH--------HHHHHHHHHHHHCCCCEEEE-ecCC--ccHHHHHHHHHHhCcccEEee-CeEeeHHHHHHH
Confidence 46666655443 26789999999999998877 4432 123455665655412443333 456889999999
Q ss_pred HHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCccccc-ChhhHHHHhhh
Q 015899 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEV-DNSNTKKLLEG 336 (398)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~v-Dl~~t~~L~~~ 336 (398)
..+|||.|.+.. .+ ..+++.++.+|+..+..|||.+|+.+|.++ |+++|++-. .-.. .++....+...
T Consensus 95 ~~aGAd~v~~p~--~d----~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~-Gad~vk~FP----a~~~~G~~~lk~i~~~ 163 (225)
T 1mxs_A 95 EAAGAQFVVTPG--IT----EDILEAGVDSEIPLLPGISTPSEIMMGYAL-GYRRFKLFP----AEISGGVAAIKAFGGP 163 (225)
T ss_dssp HHHTCSSEECSS--CC----HHHHHHHHHCSSCEECEECSHHHHHHHHTT-TCCEEEETT----HHHHTHHHHHHHHHTT
T ss_pred HHCCCCEEEeCC--CC----HHHHHHHHHhCCCEEEeeCCHHHHHHHHHC-CCCEEEEcc----CccccCHHHHHHHHhh
Confidence 999999998653 22 457788889999999999999999999997 999999911 0001 12222333221
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHH-cCCCEEEEcccccCCC
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQE-AGVKAVLVGESIVKQD 382 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~-~GadaVLVGeaLmk~~ 382 (398)
+ .++++++-||| +++++..+.+ .|+++|. |++|++.+
T Consensus 164 -----~--~~ipvvaiGGI-~~~N~~~~l~~~Ga~~v~-gSai~~~~ 201 (225)
T 1mxs_A 164 -----F--GDIRFCPTGGV-NPANVRNYMALPNVMCVG-TTWMLDSS 201 (225)
T ss_dssp -----T--TTCEEEEBSSC-CTTTHHHHHHSTTBCCEE-ECTTSCHH
T ss_pred -----C--CCCeEEEECCC-CHHHHHHHHhccCCEEEE-EchhcCch
Confidence 1 26899999999 7899999999 6999999 99999854
No 62
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.05 E-value=5.8e-09 Score=102.52 Aligned_cols=163 Identities=15% Similarity=0.123 Sum_probs=116.3
Q ss_pred HHHHHHHHcCCcEEEEeccCCcCCCCHHH----HHHHHhcCCCCcEEeccccCC---HHHHHHHHHcCcCEEEEeccCCC
Q 015899 201 EIARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCKEFIVD---AWQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 201 ~iA~aY~~~GA~aISVLTd~~~F~Gs~ed----L~~Ir~a~v~lPVL~KDFIid---~~QI~eAr~~GADaVLLiaaiL~ 273 (398)
++|.+..++|+-+ ++.- .+ -+++. ++.+|+. ++.|+-..=|+.+ ...+..+...|+|.|.+.... +
T Consensus 41 ~la~av~~aGglG--~i~~-~~--~~~~~l~~~i~~i~~~-~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~-p 113 (326)
T 3bo9_A 41 TLAAAVSEAGGLG--IIGS-GA--MKPDDLRKAISELRQK-TDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN-P 113 (326)
T ss_dssp HHHHHHHHTTSBE--EEEC-TT--CCHHHHHHHHHHHHTT-CSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC-C
T ss_pred HHHHHHHhCCCcE--EeCC-CC--CCHHHHHHHHHHHHHh-cCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC-c
Confidence 5777777777533 3321 11 25554 4455664 6678765544423 245667788999999986642 3
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccc---cChhhHHHHhhhhcccccccCCceEE
Q 015899 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFE---VDNSNTKKLLEGERGEIIRQKNIIVV 350 (398)
Q Consensus 274 ~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~---vDl~~t~~L~~~i~~~~i~~~~v~vV 350 (398)
.++++.++..|+.+++.|++.+++.++.+. |++.|.+.++...... .+++...++.+. .++++|
T Consensus 114 ----~~~~~~l~~~g~~v~~~v~s~~~a~~a~~~-GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~--------~~iPvi 180 (326)
T 3bo9_A 114 ----TKYIRELKENGTKVIPVVASDSLARMVERA-GADAVIAEGMESGGHIGEVTTFVLVNKVSRS--------VNIPVI 180 (326)
T ss_dssp ----HHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSCEEEECTTSSEECCSSCHHHHHHHHHHH--------CSSCEE
T ss_pred ----HHHHHHHHHcCCcEEEEcCCHHHHHHHHHc-CCCEEEEECCCCCccCCCccHHHHHHHHHHH--------cCCCEE
Confidence 345666778899999999999999999997 9999999776543321 233333333322 267899
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 351 GESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 351 AESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
+.|||.+++|+.++..+|+++|.||++++..++
T Consensus 181 aaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~e 213 (326)
T 3bo9_A 181 AAGGIADGRGMAAAFALGAEAVQMGTRFVASVE 213 (326)
T ss_dssp EESSCCSHHHHHHHHHHTCSEEEESHHHHTBSS
T ss_pred EECCCCCHHHHHHHHHhCCCEEEechHHHcCcc
Confidence 999999999999999999999999999998876
No 63
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.04 E-value=1.2e-09 Score=105.19 Aligned_cols=185 Identities=21% Similarity=0.186 Sum_probs=122.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcC---CCCHHHHHHHHhcCCCCcEEecc-ccCCH-HHH---HHHHH--cCcCEE
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYF---KGSFENLEAVRSAGVKCPLLCKE-FIVDA-WQI---YYART--KGADAV 265 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F---~Gs~edL~~Ir~a~v~lPVL~KD-FIid~-~QI---~eAr~--~GADaV 265 (398)
.-++..+.++.+..|+.-+-|-.-..-. .+....+..+++ ..+.+|-.- +-.+. .-| ..||+ .|-|-|
T Consensus 29 y~~~~~~~~a~~asg~e~vtva~rR~~~~~~~~~~~~~~~i~~--~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~i 106 (265)
T 1wv2_A 29 YKDLDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDVIPP--DRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLV 106 (265)
T ss_dssp SSSHHHHHHHHHHSCCSEEEEEGGGCCC-------------CT--TTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEE
T ss_pred CCCHHHHHHHHHHhCCCeEEEEEEeeccccCCCcchHHhhhhh--cCCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeE
Confidence 4588899999999999999886533322 123334444543 355666211 00111 112 23444 577877
Q ss_pred EEecc----CCChHHHHHHHHHHHHc---CCcEE-EEcCCHHHHHHHhccCCCcEEeeccccCccc-c-cChhhHHHHhh
Q 015899 266 LLIAA----VLPDLDIRYMTKICKLL---GLTAL-VEVHDEREMDRVLGIEGIELIGINNRNLETF-E-VDNSNTKKLLE 335 (398)
Q Consensus 266 LLiaa----iL~~~~L~~Li~~a~~L---GL~~L-VEVht~eEl~rAl~l~Ga~iIGINnRdL~tf-~-vDl~~t~~L~~ 335 (398)
=|=.- .| -.|..+.++.|+.| |+.+| +.+.|+....+..++ |+++|---....-+- . .|++....+.+
T Consensus 107 KlEv~~d~~~l-lpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~-G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e 184 (265)
T 1wv2_A 107 KLEVLADQKTL-FPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEI-GCIAVMPLAGLIGSGLGICNPYNLRIILE 184 (265)
T ss_dssp EECCBSCTTTC-CBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHS-CCSEEEECSSSTTCCCCCSCHHHHHHHHH
T ss_pred EEEeecCcccc-CcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHh-CCCEEEeCCccCCCCCCcCCHHHHHHHHh
Confidence 76332 11 13578888888888 99999 799999999999998 998874422211111 1 24555555544
Q ss_pred hhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015899 336 GERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 392 (398)
Q Consensus 336 ~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 392 (398)
. .+++||++|||.||+|+..++++|||||+||++|++..||....+.+.
T Consensus 185 ~--------~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~ 233 (265)
T 1wv2_A 185 E--------AKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMK 233 (265)
T ss_dssp H--------CSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHTSSSHHHHHHHHH
T ss_pred c--------CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHH
Confidence 3 368899999999999999999999999999999999999987776664
No 64
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=99.04 E-value=3.7e-09 Score=99.85 Aligned_cols=197 Identities=13% Similarity=0.106 Sum_probs=133.6
Q ss_pred CCCCCCCCCCC-CHHHHHHHHHHcCCcEEEEec-cCCc---CCCCHHHHHHHHhcCCCCcEEeccccCCHHH-HHHHHHc
Q 015899 187 SPSRGILREDF-DPVEIARSYEKGGAACLSILT-DEKY---FKGSFENLEAVRSAGVKCPLLCKEFIVDAWQ-IYYARTK 260 (398)
Q Consensus 187 SPSkG~i~~~~-dp~~iA~aY~~~GA~aISVLT-d~~~---F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~Q-I~eAr~~ 260 (398)
||| ++.-|+ +..+-.+.. ++||+.+++=. |-+| +.=++.-++.+|+. +++|+.+-=-+.||.. +..+..+
T Consensus 4 ~pS--ila~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~-~~~~~dvhLmv~dp~~~i~~~~~a 79 (231)
T 3ctl_A 4 SPS--LMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKL-ATKPLDCHLMVTRPQDYIAQLARA 79 (231)
T ss_dssp EEB--GGGSCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTT-CCSCEEEEEESSCGGGTHHHHHHH
T ss_pred Eee--hhhCChhhHHHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhc-cCCcEEEEEEecCHHHHHHHHHHc
Confidence 576 455454 556666667 89999977632 3222 23368899999986 7888765434455543 6778899
Q ss_pred CcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC--CHHHHHHHhccCCCcEEeeccccC----cccccC-hhhHHHH
Q 015899 261 GADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH--DEREMDRVLGIEGIELIGINNRNL----ETFEVD-NSNTKKL 333 (398)
Q Consensus 261 GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh--t~eEl~rAl~l~Ga~iIGINnRdL----~tf~vD-l~~t~~L 333 (398)
|||.|.+-...+++ .+.++++.+++.|+.+.+.++ |..|....+- .++++|-+=..+- ..|..+ ++...+|
T Consensus 80 GAd~itvh~Ea~~~-~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l-~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~l 157 (231)
T 3ctl_A 80 GADFITLHPETING-QAFRLIDEIRRHDMKVGLILNPETPVEAMKYYI-HKADKITVMTVDPGFAGQPFIPEMLDKLAEL 157 (231)
T ss_dssp TCSEEEECGGGCTT-THHHHHHHHHHTTCEEEEEECTTCCGGGGTTTG-GGCSEEEEESSCTTCSSCCCCTTHHHHHHHH
T ss_pred CCCEEEECcccCCc-cHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHH-hcCCEEEEeeeccCcCCccccHHHHHHHHHH
Confidence 99999988766333 588999999999999988875 4433322222 2678886432222 233222 3333344
Q ss_pred hhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEc-ccccCCCC-hHHHHHhhhc
Q 015899 334 LEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVG-ESIVKQDD-PGKGITGLFG 393 (398)
Q Consensus 334 ~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVG-eaLmk~~d-p~~~i~~L~~ 393 (398)
.+.+.. ...++.+..-||| +++.+..+.++|||.+++| ++|++++| |.+.+++|..
T Consensus 158 r~~~~~---~~~~~~I~VdGGI-~~~~~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l~~ 215 (231)
T 3ctl_A 158 KAWRER---EGLEYEIEVDGSC-NQATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTA 215 (231)
T ss_dssp HHHHHH---HTCCCEEEEESCC-STTTHHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHHHH
T ss_pred HHHHhc---cCCCceEEEECCc-CHHHHHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHHHH
Confidence 332100 0125778889999 5889999999999999999 99999989 9999888853
No 65
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=99.02 E-value=2.9e-09 Score=102.75 Aligned_cols=186 Identities=20% Similarity=0.230 Sum_probs=112.6
Q ss_pred CceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEec---cCCc------------------CCCCHHHHHHHH
Q 015899 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT---DEKY------------------FKGSFENLEAVR 234 (398)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLT---d~~~------------------F~Gs~edL~~Ir 234 (398)
+.++|.=+=.-.|+.. ...+++++++++ |++|=+-+ ||-. ..+-++.++.+|
T Consensus 15 ~~~li~~i~~GdP~~~------~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir 87 (271)
T 1ujp_A 15 RAALIPYLTAGFPSRE------GFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVR 87 (271)
T ss_dssp BCEEEEEEETTSSCHH------HHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CceEEEEecCCCCChH------HHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 4466666644455431 345567777777 77777632 1100 011257799999
Q ss_pred hcCCCCcEEecccc--CC----HHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcE--EEE-cCCHHHHHHHh
Q 015899 235 SAGVKCPLLCKEFI--VD----AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTA--LVE-VHDEREMDRVL 305 (398)
Q Consensus 235 ~a~v~lPVL~KDFI--id----~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~--LVE-Vht~eEl~rAl 305 (398)
+. +++||+.-.+. +. ..-+..+.++|||++++. -++.+++.++.+.+++.|++. |+- ..+.+.++...
T Consensus 88 ~~-~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~--Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia 164 (271)
T 1ujp_A 88 AL-TEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILP--DLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVV 164 (271)
T ss_dssp HH-CCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECT--TCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHH
T ss_pred hc-CCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEec--CCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHH
Confidence 87 89998763221 11 123556889999987764 455678999999999999864 232 24456555544
Q ss_pred cc-CCCcEE----eeccccCcccccCh-hhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccccc
Q 015899 306 GI-EGIELI----GINNRNLETFEVDN-SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIV 379 (398)
Q Consensus 306 ~l-~Ga~iI----GINnRdL~tf~vDl-~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLm 379 (398)
.. .|+.++ |++...-. +..++ +...++.+. .+++++.++||+|+++++++ .|||+|+||++|+
T Consensus 165 ~~~~gfiy~vs~~G~TG~~~~-~~~~~~~~v~~vr~~--------~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~ 233 (271)
T 1ujp_A 165 RHATGFVYAVSVTGVTGMRER-LPEEVKDLVRRIKAR--------TALPVAVGFGVSGKATAAQA--AVADGVVVGSALV 233 (271)
T ss_dssp TTCCSCEEEECC-------------CCHHHHHHHHTT--------CCSCEEEESCCCSHHHHHHH--TTSSEEEECHHHH
T ss_pred HhCCCCEEEEecCcccCCCCC-CCccHHHHHHHHHhh--------cCCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHh
Confidence 43 255433 34332211 22222 333333322 36789999999999999997 9999999999999
Q ss_pred CCC
Q 015899 380 KQD 382 (398)
Q Consensus 380 k~~ 382 (398)
+..
T Consensus 234 ~~~ 236 (271)
T 1ujp_A 234 RAL 236 (271)
T ss_dssp HHH
T ss_pred ccc
Confidence 864
No 66
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=99.01 E-value=3.1e-09 Score=102.53 Aligned_cols=179 Identities=21% Similarity=0.157 Sum_probs=119.9
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcC-C-CCHHHHHHHHhcCCCCcEEeccccCCH-HHHH----HHH-HcCcCEEEE
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYF-K-GSFENLEAVRSAGVKCPLLCKEFIVDA-WQIY----YAR-TKGADAVLL 267 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F-~-Gs~edL~~Ir~a~v~lPVL~KDFIid~-~QI~----eAr-~~GADaVLL 267 (398)
.-++..+.++.+..||.-|-|-+-..-. . +....+..++ .+++|-.+-.... .+.. .++ ..|-+-|=|
T Consensus 22 y~~~~~~~~ai~asg~eivtva~rR~~~~~~~~~~~~~~i~----~~~~lpntaG~~taeeAv~~a~lare~~gt~~iKl 97 (268)
T 2htm_A 22 YEDFGVMREAIAAAKAEVVTVSVRRVELKAPGHVGLLEALE----GVRLLPNTAGARTAEEAVRLARLGRLLTGERWVKL 97 (268)
T ss_dssp CSCHHHHHHHHHHTTCSEEEEEEEECC-------CHHHHTT----TSEEEEBCTTCCSHHHHHHHHHHHHHHHCCSEEBC
T ss_pred CCCHHHHHHHHHHhCCCEEEEEccccCCCCCCcccHHHHHh----hhhccCcccCCCCHHHHHHHHHhhhHhcCcceeee
Confidence 4578899999999999998887644322 1 2222333343 4567755533322 2211 133 346665433
Q ss_pred e----ccCCChHHHHHHHHHHHHc---CCcEE-EEcCCHHHHHHHhccCCCcEE-------eeccccCcccccChhhHHH
Q 015899 268 I----AAVLPDLDIRYMTKICKLL---GLTAL-VEVHDEREMDRVLGIEGIELI-------GINNRNLETFEVDNSNTKK 332 (398)
Q Consensus 268 i----aaiL~~~~L~~Li~~a~~L---GL~~L-VEVht~eEl~rAl~l~Ga~iI-------GINnRdL~tf~vDl~~t~~ 332 (398)
- ...|. .|..+.++.|+.| |+.+| +...|+..++++.++ |+++| |. ++.+.+ ......
T Consensus 98 Evi~d~~~l~-pD~~~tv~aa~~L~k~Gf~Vlpy~~~D~~~ak~l~~~-G~~aVmPlg~pIGs-G~Gi~~----~~~L~~ 170 (268)
T 2htm_A 98 EVIPDPTYLL-PDPLETLKAAERLIEEDFLVLPYMGPDLVLAKRLAAL-GTATVMPLAAPIGS-GWGVRT----RALLEL 170 (268)
T ss_dssp CCCSCTTTTC-CCHHHHHHHHHHHHHTTCEECCEECSCHHHHHHHHHH-TCSCBEEBSSSTTT-CCCSTT----HHHHHH
T ss_pred eeccCccccC-cCHHHHHHHHHHHHHCCCEEeeccCCCHHHHHHHHhc-CCCEEEecCccCcC-CcccCC----HHHHHH
Confidence 1 11222 2578899999999 99999 788899998998887 88765 22 233332 333344
Q ss_pred HhhhhcccccccCC-ceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015899 333 LLEGERGEIIRQKN-IIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 392 (398)
Q Consensus 333 L~~~i~~~~i~~~~-v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 392 (398)
+.+. ..+ ++||+++||.||+|+..++++|||||+||++|+++.||.+..+.+.
T Consensus 171 i~~~-------~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~ 224 (268)
T 2htm_A 171 FARE-------KASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAEAQDPPAMAEAFR 224 (268)
T ss_dssp HHHT-------TTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHTSSSHHHHHHHHH
T ss_pred HHHh-------cCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHH
Confidence 4331 125 7899999999999999999999999999999999999987776664
No 67
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=99.01 E-value=2.9e-09 Score=102.74 Aligned_cols=190 Identities=18% Similarity=0.219 Sum_probs=123.3
Q ss_pred CCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEe---ccCCc----CC---------C-----CHHHHHHH
Q 015899 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSIL---TDEKY----FK---------G-----SFENLEAV 233 (398)
Q Consensus 175 ~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVL---Td~~~----F~---------G-----s~edL~~I 233 (398)
++.++|.=+=-.-|+. ..-.+++++++++||+.|.+- +||-+ -+ | -++.++.+
T Consensus 16 ~~~ali~yi~aGdP~~------~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~i 89 (267)
T 3vnd_A 16 DKGAFVPFVTIGDPSP------ELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKV 89 (267)
T ss_dssp TCCEEEEEEETTSSCH------HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCH------HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4557787662222321 235678999999999999995 22211 11 1 16777888
Q ss_pred HhcCCCCcEEeccccCCHH------HHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEE--E-EcCCHHHHHHH
Q 015899 234 RSAGVKCPLLCKEFIVDAW------QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTAL--V-EVHDEREMDRV 304 (398)
Q Consensus 234 r~a~v~lPVL~KDFIid~~------QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~L--V-EVht~eEl~rA 304 (398)
|+..+++||+.--+.-+-| -+..+.++|+|++++ --|+.++..++.+.+++.|++.+ + -..+.+.+..+
T Consensus 90 r~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii--~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i 167 (267)
T 3vnd_A 90 RAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLI--ADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMV 167 (267)
T ss_dssp HHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEE--TTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHH
T ss_pred HhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEe--CCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHH
Confidence 8643789987543311111 266778999999887 35777789999999999999863 2 22456778877
Q ss_pred hccCCCcEEee-ccccCcc----cccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccccc
Q 015899 305 LGIEGIELIGI-NNRNLET----FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIV 379 (398)
Q Consensus 305 l~l~Ga~iIGI-NnRdL~t----f~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLm 379 (398)
.+. +..+|-+ .....+. +..++ .++++.++. . .+++++..+||+|++++++....|||+|+||++|+
T Consensus 168 ~~~-~~gfvY~vS~~GvTG~~~~~~~~~---~~~v~~vr~--~--~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv 239 (267)
T 3vnd_A 168 SEQ-GEGYTYLLSRAGVTGTESKAGEPI---ENILTQLAE--F--NAPPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVV 239 (267)
T ss_dssp HHH-CCSCEEESCCCCCC--------CH---HHHHHHHHT--T--TCCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHh-CCCcEEEEecCCCCCCccCCcHHH---HHHHHHHHH--h--cCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 775 4333433 2112211 22232 333333221 1 35789999999999999989999999999999999
Q ss_pred C
Q 015899 380 K 380 (398)
Q Consensus 380 k 380 (398)
+
T Consensus 240 ~ 240 (267)
T 3vnd_A 240 K 240 (267)
T ss_dssp H
T ss_pred H
Confidence 7
No 68
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.01 E-value=6.9e-09 Score=101.40 Aligned_cols=167 Identities=15% Similarity=0.152 Sum_probs=114.6
Q ss_pred HHHHHHHHcCCcEEEEeccCCcCCCCHHH----HHHHHhcCCCCcEEeccccC-----C--HHHHHHHHHcCcCEEEEec
Q 015899 201 EIARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCKEFIV-----D--AWQIYYARTKGADAVLLIA 269 (398)
Q Consensus 201 ~iA~aY~~~GA~aISVLTd~~~F~Gs~ed----L~~Ir~a~v~lPVL~KDFIi-----d--~~QI~eAr~~GADaVLLia 269 (398)
++|.+..++|+ +.++.... + .+++. ++.+|+. ++.|+-..=|+- + ..++..+..+|+|.|.+..
T Consensus 30 ~la~av~~aGg--lG~i~~~~-~-~s~~~l~~~i~~i~~~-~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~ 104 (328)
T 2gjl_A 30 EMAAAVANAGG--LATLSALT-Q-PSPEALAAEIARCREL-TDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAG 104 (328)
T ss_dssp HHHHHHHHTTS--BCEEETTT-S-SSHHHHHHHHHHHHHH-CSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHCCC--eEEeCCCC-C-CCHHHHHHHHHHHHHh-cCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcC
Confidence 57778777774 33332211 1 23555 4556665 566764433332 1 2567888899999999876
Q ss_pred cCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCccc--ccChhhHHHHhhhhcccccccCCc
Q 015899 270 AVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETF--EVDNSNTKKLLEGERGEIIRQKNI 347 (398)
Q Consensus 270 aiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf--~vDl~~t~~L~~~i~~~~i~~~~v 347 (398)
.. + .++++.++..|+.++..|++.+++.++.+. |++.|.+.++..... ..+. .+..+++.+.. ..++
T Consensus 105 g~-p----~~~~~~l~~~gi~vi~~v~t~~~a~~~~~~-GaD~i~v~g~~~GG~~G~~~~-~~~~~l~~v~~----~~~i 173 (328)
T 2gjl_A 105 ND-P----GEHIAEFRRHGVKVIHKCTAVRHALKAERL-GVDAVSIDGFECAGHPGEDDI-PGLVLLPAAAN----RLRV 173 (328)
T ss_dssp SC-C----HHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSEEEEECTTCSBCCCSSCC-CHHHHHHHHHT----TCCS
T ss_pred CC-c----HHHHHHHHHcCCCEEeeCCCHHHHHHHHHc-CCCEEEEECCCCCcCCCCccc-cHHHHHHHHHH----hcCC
Confidence 42 2 356667777899999999999999999997 999998865543111 1011 12333333221 1368
Q ss_pred eEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 348 IVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 348 ~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
++|+.|||.+++|+.++..+|+|+|.||++++..++
T Consensus 174 PviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~~e 209 (328)
T 2gjl_A 174 PIIASGGFADGRGLVAALALGADAINMGTRFLATRE 209 (328)
T ss_dssp CEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTSSS
T ss_pred CEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCcc
Confidence 999999999999999999999999999999999887
No 69
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=99.00 E-value=3.5e-09 Score=102.41 Aligned_cols=193 Identities=18% Similarity=0.241 Sum_probs=120.9
Q ss_pred CCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEec---cCCc----CC--------------CCHHHHHHH
Q 015899 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT---DEKY----FK--------------GSFENLEAV 233 (398)
Q Consensus 175 ~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLT---d~~~----F~--------------Gs~edL~~I 233 (398)
++.++|.=+=--=|+. ..-.+++++++++||+.|.+-. ||-+ .+ .-++.++.+
T Consensus 18 ~~~ali~yi~aGdP~~------~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~ 91 (271)
T 3nav_A 18 QQGAFVPFVTIGDPNP------EQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQI 91 (271)
T ss_dssp TBCEEEEEEETTSSCH------HHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCH------HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3456776662222321 2356788889999999988852 2211 11 124667777
Q ss_pred HhcCCCCcEEeccccCCHH------HHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEE--EEc-CCHHHHHHH
Q 015899 234 RSAGVKCPLLCKEFIVDAW------QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTAL--VEV-HDEREMDRV 304 (398)
Q Consensus 234 r~a~v~lPVL~KDFIid~~------QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~L--VEV-ht~eEl~rA 304 (398)
|+..+++||+.--+.-+-| -+..+.++|+|++++ --|+.++..++.+.++..|++.+ +=- .+.+.+.++
T Consensus 92 r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIi--pDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i 169 (271)
T 3nav_A 92 RARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLI--ADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAV 169 (271)
T ss_dssp HHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEE--TTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHH
T ss_pred HhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEE--CCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHH
Confidence 7643689986543211111 266788999999877 45777789999999999999853 222 356777777
Q ss_pred hccCCCcEEee-ccccCcccccC-hhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015899 305 LGIEGIELIGI-NNRNLETFEVD-NSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 305 l~l~Ga~iIGI-NnRdL~tf~vD-l~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 380 (398)
.+. +..+|-. .....+.-... .....++++.++. . .+++++..+||+|++++++....|||||+||++|++
T Consensus 170 ~~~-~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~--~--~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv~ 242 (271)
T 3nav_A 170 AQL-GKGYTYLLSRAGVTGAETKANMPVHALLERLQQ--F--DAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVVK 242 (271)
T ss_dssp HHH-CCSCEEECCCC--------CCHHHHHHHHHHHH--T--TCCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred HHH-CCCeEEEEeccCCCCcccCCchhHHHHHHHHHH--h--cCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 765 4444433 21122111111 1122333443321 1 357899999999999999889999999999999997
No 70
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=99.00 E-value=2.7e-09 Score=100.41 Aligned_cols=174 Identities=16% Similarity=0.113 Sum_probs=133.7
Q ss_pred eEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHH
Q 015899 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (398)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eA 257 (398)
.||+=+.-.+| .+...+|+++.++|..+|-| |... .+.++.++.+++. +.-+++-=+-+++..|+..|
T Consensus 14 ~vi~Vir~~~~--------~~a~~~a~al~~gGi~~iEv-t~~t--~~a~~~I~~l~~~-~p~~~IGAGTVlt~~~a~~a 81 (217)
T 3lab_A 14 PLIPVIVIDDL--------VHAIPMAKALVAGGVHLLEV-TLRT--EAGLAAISAIKKA-VPEAIVGAGTVCTADDFQKA 81 (217)
T ss_dssp SEEEEECCSCG--------GGHHHHHHHHHHTTCCEEEE-ETTS--TTHHHHHHHHHHH-CTTSEEEEECCCSHHHHHHH
T ss_pred CEEEEEEcCCH--------HHHHHHHHHHHHcCCCEEEE-eCCC--ccHHHHHHHHHHH-CCCCeEeeccccCHHHHHHH
Confidence 56766644444 47889999999999999998 3222 3577899999886 55567767788999999999
Q ss_pred HHcCcCEEEEeccCCChHHHHHHHHHHHHcCC------cEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHH
Q 015899 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGL------TALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTK 331 (398)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL------~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~ 331 (398)
..+||+.|.--. ++ .+++++|++.|+ ..|--|.|.+|+.+|+++ |+++|.+-.-... -.++..+
T Consensus 82 i~AGA~fivsP~--~~----~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~~-Gad~vK~FPa~~~---gG~~~lk 151 (217)
T 3lab_A 82 IDAGAQFIVSPG--LT----PELIEKAKQVKLDGQWQGVFLPGVATASEVMIAAQA-GITQLKCFPASAI---GGAKLLK 151 (217)
T ss_dssp HHHTCSEEEESS--CC----HHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHHHHT-TCCEEEETTTTTT---THHHHHH
T ss_pred HHcCCCEEEeCC--Cc----HHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHHHHc-CCCEEEECccccc---cCHHHHH
Confidence 999999987633 33 467888999999 999999999999999998 9999977532110 0123333
Q ss_pred HHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 332 KLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 332 ~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
.|..- + .++.+++.|||+ ++++....++|+.++++|+.++..
T Consensus 152 al~~p-----~--p~i~~~ptGGI~-~~N~~~~l~aGa~~~vgGs~l~~~ 193 (217)
T 3lab_A 152 AWSGP-----F--PDIQFCPTGGIS-KDNYKEYLGLPNVICAGGSWLTES 193 (217)
T ss_dssp HHHTT-----C--TTCEEEEBSSCC-TTTHHHHHHSTTBCCEEESGGGCH
T ss_pred HHHhh-----h--cCceEEEeCCCC-HHHHHHHHHCCCEEEEEChhhcCh
Confidence 33321 2 368999999995 999999999999999888877754
No 71
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=98.99 E-value=6.1e-09 Score=98.24 Aligned_cols=194 Identities=13% Similarity=0.119 Sum_probs=133.9
Q ss_pred CCCCCCCCCCC-CHHHHHHHHHHcCCcEEEEec-cCCc---CCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHc
Q 015899 187 SPSRGILREDF-DPVEIARSYEKGGAACLSILT-DEKY---FKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTK 260 (398)
Q Consensus 187 SPSkG~i~~~~-dp~~iA~aY~~~GA~aISVLT-d~~~---F~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~ 260 (398)
||| ++.-|+ +..+-.+..+++||+.+++=. |-+| +.=++..++.+|+. + +.|+.+-=.|.||....+....
T Consensus 9 ~pS--ila~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~-~p~~~~dvhLmv~dp~~~i~~~~~ 85 (227)
T 1tqx_A 9 APS--VLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKY-TKSIFFDVHLMVEYPEKYVPLLKT 85 (227)
T ss_dssp EEB--GGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGG-CSSCEEEEEEESSCGGGGGGGCTT
T ss_pred Eee--hhcCChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHh-CCCCcEEEEEEEcCHHHHHHHHHh
Confidence 687 455554 666777888899999977632 3222 33357899999987 7 8888765556666543344344
Q ss_pred CcCEEEEeccCCChHHHHHHHH---HHHHcCCcEEEEcC--C-HHHHHHHhccCCCcEE---eecc-ccCccccc-Chhh
Q 015899 261 GADAVLLIAAVLPDLDIRYMTK---ICKLLGLTALVEVH--D-EREMDRVLGIEGIELI---GINN-RNLETFEV-DNSN 329 (398)
Q Consensus 261 GADaVLLiaaiL~~~~L~~Li~---~a~~LGL~~LVEVh--t-~eEl~rAl~l~Ga~iI---GINn-RdL~tf~v-Dl~~ 329 (398)
||.|..-...-. +.+...++ .+++.|+.+-+.++ | .+.++..+.+..+++| ++|. ..-..|.. .++.
T Consensus 86 -Ad~itvH~ea~~-~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~k 163 (227)
T 1tqx_A 86 -SNQLTFHFEALN-EDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGK 163 (227)
T ss_dssp -SSEEEEEGGGGT-TCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHH
T ss_pred -CCEEEEeecCCc-cCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHH
Confidence 999977665532 24778888 88999999999883 3 4455666664138988 4542 11122321 2333
Q ss_pred HHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 330 TKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 330 t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
..++.+. + + ++.+..-||| +++.+..+.++|||.+++|++|++++||.+++++|..
T Consensus 164 i~~lr~~-----~-~-~~~I~VdGGI-~~~ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~ 219 (227)
T 1tqx_A 164 VSFLRKK-----Y-K-NLNIQVDGGL-NIETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRV 219 (227)
T ss_dssp HHHHHHH-----C-T-TCEEEEESSC-CHHHHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHH
T ss_pred HHHHHHh-----c-c-CCeEEEECCC-CHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHH
Confidence 3444432 1 2 6778889999 6999999999999999999999999999999988753
No 72
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=98.91 E-value=7.8e-08 Score=95.59 Aligned_cols=125 Identities=20% Similarity=0.184 Sum_probs=93.4
Q ss_pred HHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccC----cccccC
Q 015899 251 AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNL----ETFEVD 326 (398)
Q Consensus 251 ~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL----~tf~vD 326 (398)
..++..+...|+|.|.+.....+ .++++..+..|+.+++.|+|.+++.++.+. |++.|.+.++.. .++..+
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~----~~~i~~~~~~g~~v~~~v~t~~~a~~a~~~-GaD~i~v~g~~~GGh~g~~~~~ 186 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPD----REVIARLRRAGTLTLVTATTPEEARAVEAA-GADAVIAQGVEAGGHQGTHRDS 186 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCC----HHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSEEEEECTTCSEECCCSSCC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCc----HHHHHHHHHCCCeEEEECCCHHHHHHHHHc-CCCEEEEeCCCcCCcCCCcccc
Confidence 44677788999999998765443 345555667899999999999999999997 999999865432 122111
Q ss_pred h------hhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCCh
Q 015899 327 N------SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDP 384 (398)
Q Consensus 327 l------~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp 384 (398)
. ..+..+++.++. ..++++|+.|||.+++++..+..+|+|+|.||++++..+++
T Consensus 187 ~~~~~~~~~~~~~l~~i~~----~~~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e~ 246 (369)
T 3bw2_A 187 SEDDGAGIGLLSLLAQVRE----AVDIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATDES 246 (369)
T ss_dssp GGGTTCCCCHHHHHHHHHH----HCSSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSTTC
T ss_pred cccccccccHHHHHHHHHH----hcCceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccc
Confidence 1 112334433221 13689999999999999999999999999999999998875
No 73
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=98.90 E-value=3e-08 Score=97.39 Aligned_cols=165 Identities=15% Similarity=0.126 Sum_probs=113.4
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcCCCCHHH----HHHHHhcCCCCcEEeccccCC---HHHHHHHHHcCcCEEEEeccCC
Q 015899 200 VEIARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCKEFIVD---AWQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F~Gs~ed----L~~Ir~a~v~lPVL~KDFIid---~~QI~eAr~~GADaVLLiaaiL 272 (398)
.+++.+..++|+-++-.. . + -+.+. ++.+|+. ++.|+-..=|+.+ ...+..+..+|+|+|.+... .
T Consensus 26 ~~la~av~~aG~lG~i~~--~-~--~~~~~~~~~i~~i~~~-~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g-~ 98 (332)
T 2z6i_A 26 GDLAGAVSKAGGLGIIGG--G-N--APKEVVKANIDKIKSL-TDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAG-N 98 (332)
T ss_dssp HHHHHHHHHHTSBEEEEC--T-T--CCHHHHHHHHHHHHHH-CCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSS-C
T ss_pred HHHHHHHHhCCCcEEeCC--C-C--CCHHHHHHHHHHHHHh-cCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCC-C
Confidence 357777777776332221 1 1 24444 4455665 5677755444323 24577788999999998764 2
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCccc---ccChhhHHHHhhhhcccccccCCceE
Q 015899 273 PDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETF---EVDNSNTKKLLEGERGEIIRQKNIIV 349 (398)
Q Consensus 273 ~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf---~vDl~~t~~L~~~i~~~~i~~~~v~v 349 (398)
+ .++++.++..|+.+++.|++.+++..+.+. |++.|.+.++.-... ..+++...++.+. .++++
T Consensus 99 p----~~~i~~l~~~g~~v~~~v~~~~~a~~~~~~-GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~--------~~iPV 165 (332)
T 2z6i_A 99 P----SKYMERFHEAGIIVIPVVPSVALAKRMEKI-GADAVIAEGMEAGGHIGKLTTMTLVRQVATA--------ISIPV 165 (332)
T ss_dssp G----GGTHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSCEEEECTTSSEECCSSCHHHHHHHHHHH--------CSSCE
T ss_pred h----HHHHHHHHHcCCeEEEEeCCHHHHHHHHHc-CCCEEEEECCCCCCCCCCccHHHHHHHHHHh--------cCCCE
Confidence 2 234555666799999999999999999997 999998865422111 1223333333322 36899
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEcccccCCCCh
Q 015899 350 VGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDP 384 (398)
Q Consensus 350 VAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp 384 (398)
|+.|||.+++++..+..+|+|+|.||++++..++.
T Consensus 166 iaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~e~ 200 (332)
T 2z6i_A 166 IAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKES 200 (332)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEECHHHHTBTTC
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEecHHHhcCccc
Confidence 99999999999999999999999999999998843
No 74
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.89 E-value=1.8e-08 Score=104.38 Aligned_cols=181 Identities=14% Similarity=0.211 Sum_probs=97.3
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCC--HHHHHHHHhcCCCCcEEeccc-----------c-CCH-HHHHHH
Q 015899 193 LREDFDPVEIARSYEKGGAACLSILTDEKYFKGS--FENLEAVRSAGVKCPLLCKEF-----------I-VDA-WQIYYA 257 (398)
Q Consensus 193 i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs--~edL~~Ir~a~v~lPVL~KDF-----------I-id~-~QI~eA 257 (398)
+.++.+..+..+.+.+.+...+-|+.+.+-+.|= ..|+.... .-|.-+||- . .+. ..+..+
T Consensus 162 v~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~----~~p~a~kd~~grl~v~aavG~~~~~~~~a~~l 237 (490)
T 4avf_A 162 AREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAK----TYPLASKDEQGRLRVGAAVGTGADTGERVAAL 237 (490)
T ss_dssp -------------------------------------------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhc----cCcchhhhccCcceeeeeeccccchHHHHHHH
Confidence 4566777888888899999999998887777773 34443332 334444441 1 132 456667
Q ss_pred HHcCcCEEEEeccCCChHHHHHHHHHHHH-c-CCcEEEE-cCCHHHHHHHhccCCCcEEeecc--------ccCccc-cc
Q 015899 258 RTKGADAVLLIAAVLPDLDIRYMTKICKL-L-GLTALVE-VHDEREMDRVLGIEGIELIGINN--------RNLETF-EV 325 (398)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~-L-GL~~LVE-Vht~eEl~rAl~l~Ga~iIGINn--------RdL~tf-~v 325 (398)
..+|+|.|.+.++.-....+.++++..++ . ++.+++- |.+.+++..+.++ |++.|.+.. |....+ ..
T Consensus 238 ~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~a-GaD~I~vg~g~Gs~~~t~~~~g~g~p 316 (490)
T 4avf_A 238 VAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEA-GADAVKVGIGPGSICTTRIVAGVGVP 316 (490)
T ss_dssp HHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHT-TCSEEEECSSCSTTCHHHHHTCBCCC
T ss_pred hhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHc-CCCEEEECCCCCcCCCccccCCCCcc
Confidence 78999999998876655556666666665 4 7777775 9999999999997 999987731 111222 22
Q ss_pred ChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 326 DNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 326 Dl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
++....++.+.+ ...++++|+.|||.+++|+.++..+||++|.||++|+....
T Consensus 317 ~~~~l~~v~~~~-----~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vGs~~~~~~E 369 (490)
T 4avf_A 317 QISAIANVAAAL-----EGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEE 369 (490)
T ss_dssp HHHHHHHHHHHH-----TTTTCCEEEESCCCSHHHHHHHHHHTCSEEEECTTTTTBTT
T ss_pred HHHHHHHHHHHh-----ccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeecHHHhcCCC
Confidence 344445555432 12368999999999999999999999999999999988653
No 75
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.88 E-value=9.5e-08 Score=91.51 Aligned_cols=174 Identities=19% Similarity=0.138 Sum_probs=124.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEec-----cc-cC-----CHHHHHHHHHcCcC
Q 015899 195 EDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCK-----EF-IV-----DAWQIYYARTKGAD 263 (398)
Q Consensus 195 ~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~K-----DF-Ii-----d~~QI~eAr~~GAD 263 (398)
...++..+.+...++|++++-+ ++..+.... . -+.|++.| .| .- -.+++.+|...|||
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v---------~~~~v~~~~-~-~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~ 107 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVF---------QRGIAEKYY-D-GSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGAS 107 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEE---------CHHHHHHHC-C-SSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCS
T ss_pred chhhHHHHHHHHHhhCCCEEEE---------CHHHHHHhh-c-CCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCC
Confidence 3678999999999999998887 344555544 3 45664421 12 11 11568899999999
Q ss_pred EEEEec--cCCCh----HHHHHHHHHHHHcCCcEEEEcC----------CHHHHH----HHhccCCCcEEeeccccCccc
Q 015899 264 AVLLIA--AVLPD----LDIRYMTKICKLLGLTALVEVH----------DEREMD----RVLGIEGIELIGINNRNLETF 323 (398)
Q Consensus 264 aVLLia--aiL~~----~~L~~Li~~a~~LGL~~LVEVh----------t~eEl~----rAl~l~Ga~iIGINnRdL~tf 323 (398)
+|-+-. .-.+. +++..+.+.|+..|+.+++|++ +.++.. .+.++ |+++|++..
T Consensus 108 ~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~-GAD~vkt~~------ 180 (263)
T 1w8s_A 108 AVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALEL-GADAMKIKY------ 180 (263)
T ss_dssp EEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHH-TCSEEEEEC------
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHc-CCCEEEEcC------
Confidence 998754 22222 2356666777788999999985 345544 34665 999999982
Q ss_pred ccChhhHHHHhhhhcccccccCCceEEEecCCC--CHHHHHHHH----HcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 324 EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLF--TPDDIAYVQ----EAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 324 ~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~--t~eD~~~l~----~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
..+++...++.+.. ..+++++.|||+ |.+|+.... ++|++|+.+|.+|++.+||.+++++|..
T Consensus 181 ~~~~e~~~~~~~~~-------~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~dp~~~~~~l~~ 249 (263)
T 1w8s_A 181 TGDPKTFSWAVKVA-------GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRDALKFARALAE 249 (263)
T ss_dssp CSSHHHHHHHHHHT-------TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTSTTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhC-------CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCcCHHHHHHHHHH
Confidence 13556655655431 123899999999 888877666 8999999999999999999999988864
No 76
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=98.88 E-value=1.6e-08 Score=95.93 Aligned_cols=192 Identities=9% Similarity=0.026 Sum_probs=128.8
Q ss_pred CCCCCCCCCCCC-CHHHHHHHHHHcCCcEEEEec-cCCcC---CCCHHHHHHHHhcCC--CCcEEeccccCCH-HHHHHH
Q 015899 186 ASPSRGILREDF-DPVEIARSYEKGGAACLSILT-DEKYF---KGSFENLEAVRSAGV--KCPLLCKEFIVDA-WQIYYA 257 (398)
Q Consensus 186 aSPSkG~i~~~~-dp~~iA~aY~~~GA~aISVLT-d~~~F---~Gs~edL~~Ir~a~v--~lPVL~KDFIid~-~QI~eA 257 (398)
-||| ++.-|+ +..+..+..+++||+.+++=. |-+|. .=++.-++.+|+. + ++.++ +-+| ..+..+
T Consensus 16 i~ps--ila~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G~~~v~~lr~~-~~~DvhLM----v~~p~~~i~~~ 88 (237)
T 3cu2_A 16 LSVG--ILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFPTH-CFKDVHLM----VRNQLEVAKAV 88 (237)
T ss_dssp EEEE--GGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCTHHHHTSCTT-SEEEEEEE----CSCHHHHHHHH
T ss_pred EEEe--eeeCCcccHHHHHHHHHHcCCCEEEEEEecCccccchhhhHHHHHHHhhh-CCCCeEEE----EECHHHHHHHH
Confidence 4677 455555 577778888999999987632 32222 1234677777764 4 22222 3444 457778
Q ss_pred HHcCcCEEEEeccCCChHHHHHHHHHHHHc---------CCcEEEEc--CCHHHHHHHhccCCCcEEee---cc-ccCcc
Q 015899 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLL---------GLTALVEV--HDEREMDRVLGIEGIELIGI---NN-RNLET 322 (398)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~L---------GL~~LVEV--ht~eEl~rAl~l~Ga~iIGI---Nn-RdL~t 322 (398)
..+|||.|.+-...- ..+...++.+++. |+.+-+.+ +|..|....+. +++++|.+ |. ..-.+
T Consensus 89 ~~aGAd~itvH~ea~--~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l-~~~D~vlvMsv~pgfggq~ 165 (237)
T 3cu2_A 89 VANGANLVTLQLEQY--HDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYL-DQIDVIQLLTLDPRNGTKY 165 (237)
T ss_dssp HHTTCSEEEEETTCT--TSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTT-TTCSEEEEESEETTTTEEC
T ss_pred HHcCCCEEEEecCCc--ccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHh-hcCceeeeeeeccCcCCee
Confidence 899999988766543 3488899999999 99999888 56655544443 37899866 42 11222
Q ss_pred ccc-ChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHH--cCCCEEEEcccccCCCChHHHHHhhh
Q 015899 323 FEV-DNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQE--AGVKAVLVGESIVKQDDPGKGITGLF 392 (398)
Q Consensus 323 f~v-Dl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~--~GadaVLVGeaLmk~~dp~~~i~~L~ 392 (398)
|.. .++...++.+.+... ..++.+.+-||| +++.+..+.+ +|+|.+++|++|+++ ||.+++++|.
T Consensus 166 f~~~~l~ki~~lr~~~~~~---~~~~~I~vdGGI-~~~~~~~~~~~~aGad~~VvGSaIf~~-d~~~~~~~l~ 233 (237)
T 3cu2_A 166 PSELILDRVIQVEKRLGNR---RVEKLINIDGSM-TLELAKYFKQGTHQIDWLVSGSALFSG-ELKTNLKVWK 233 (237)
T ss_dssp CHHHHHHHHHHHHHHHGGG---GGGCEEEEESSC-CHHHHHHHHHSSSCCCCEEECGGGGSS-CHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHHHhc---CCCceEEEECCc-CHHHHHHHHHhCCCCcEEEEeeHHhCC-CHHHHHHHHH
Confidence 311 133333443331100 125778899999 6999999999 999999999999999 9999998885
No 77
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.86 E-value=2.9e-09 Score=98.12 Aligned_cols=157 Identities=10% Similarity=0.043 Sum_probs=109.3
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcCCCCHHH-HHHHHhc--CCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHH
Q 015899 200 VEIARSYEKGGAACLSILTDEKYFKGSFEN-LEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD 276 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F~Gs~ed-L~~Ir~a--~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~ 276 (398)
.+.++...++|+++|-+- ++. -+.+. .+.+++. ....|++..|. +..|..+|||.|.|....++...
T Consensus 16 ~~~~~~a~~~Gv~~v~lr-~k~---~~~~~~~~~i~~l~~~~~~~livnd~------~~~A~~~gadgvhl~~~~~~~~~ 85 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLR-KPE---TPAMYSERLLTLIPEKYHRRIVTHEH------FYLKEEFNLMGIHLNARNPSEPH 85 (210)
T ss_dssp HHHHHHHHHTTCCEEEEC-CSS---CCHHHHHHHHHHSCGGGGGGEEESSC------TTHHHHTTCSEEECCSSSCSCCT
T ss_pred HHHHHHHHHCCCCEEEEc-cCC---CCHHHHHHHHHHHHHHhCCeEEEeCC------HHHHHHcCCCEEEECcccccccc
Confidence 477888889999999764 432 23333 3334432 12456654443 36688899999999766553211
Q ss_pred HHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCccc-------ccChhhHHHHhhhhcccccccCCceE
Q 015899 277 IRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETF-------EVDNSNTKKLLEGERGEIIRQKNIIV 349 (398)
Q Consensus 277 L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf-------~vDl~~t~~L~~~i~~~~i~~~~v~v 349 (398)
..++-+.+-|||.+|+..|. + |+++|++... +.|- ..+++...++... + ..++++
T Consensus 86 ---------~~~~~ig~s~~t~~e~~~A~-~-GaDyv~~g~v-f~t~sk~~~~~~~g~~~l~~~~~~-----~-~~~iPv 147 (210)
T 3ceu_A 86 ---------DYAGHVSCSCHSVEEVKNRK-H-FYDYVFMSPI-YDSISKVNYYSTYTAEELREAQKA-----K-IIDSKV 147 (210)
T ss_dssp ---------TCCSEEEEEECSHHHHHTTG-G-GSSEEEECCC-C---------CCCCHHHHHHHHHT-----T-CSSTTE
T ss_pred ---------ccCCEEEEecCCHHHHHHHh-h-CCCEEEECCc-CCCCCCCCCCCCCCHHHHHHHHHh-----c-CCCCCE
Confidence 13788889999999999987 6 9999997542 1111 2345544444331 0 025789
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChH
Q 015899 350 VGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPG 385 (398)
Q Consensus 350 VAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~ 385 (398)
|+.|||+ ++++..+.++|++||-||++|++.+||.
T Consensus 148 iaiGGI~-~~nv~~~~~~Ga~gVav~s~i~~~~d~~ 182 (210)
T 3ceu_A 148 MALGGIN-EDNLLEIKDFGFGGAVVLGDLWNKFDAC 182 (210)
T ss_dssp EEESSCC-TTTHHHHHHTTCSEEEESHHHHTTCCTT
T ss_pred EEECCCC-HHHHHHHHHhCCCEEEEhHHhHcCCCHH
Confidence 9999995 9999999999999999999999999986
No 78
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.85 E-value=1.2e-08 Score=104.96 Aligned_cols=181 Identities=12% Similarity=0.162 Sum_probs=93.8
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccc----c----C---C--HHHHHHHHH
Q 015899 193 LREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEF----I----V---D--AWQIYYART 259 (398)
Q Consensus 193 i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDF----I----i---d--~~QI~eAr~ 259 (398)
+.++.+..+.++.+.+.+...+-|+++.+-+.|=...-..++.. .-|+.++|+ + + . ..++..+..
T Consensus 170 v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~--~~~~~~~D~~~~l~vga~ig~~~~~~~~a~~l~~ 247 (494)
T 1vrd_A 170 APPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVI--EHPNAARDEKGRLLVGAAVGTSPETMERVEKLVK 247 (494)
T ss_dssp ---------------------------------------CHHHH--TCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhh--ccccccccchhhhccccccCcCHhHHHHHHHHHH
Confidence 45567788889999999999999999888887855444334432 334444443 1 1 1 347778889
Q ss_pred cCcCEEEEeccCCChHHHHHHHHHHHH-c-CCcEEE-EcCCHHHHHHHhccCCCcEEeeccc--------cCcccc-cCh
Q 015899 260 KGADAVLLIAAVLPDLDIRYMTKICKL-L-GLTALV-EVHDEREMDRVLGIEGIELIGINNR--------NLETFE-VDN 327 (398)
Q Consensus 260 ~GADaVLLiaaiL~~~~L~~Li~~a~~-L-GL~~LV-EVht~eEl~rAl~l~Ga~iIGINnR--------dL~tf~-vDl 327 (398)
+|+|+|.+....-......++++..++ . ++.+++ .+.+.+++..+.++ |++.|-+++. .+.... ..+
T Consensus 248 aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~-G~d~I~v~~~~G~~~~~~~~~~~g~p~~ 326 (494)
T 1vrd_A 248 AGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKA-GADAVKVGVGPGSICTTRVVAGVGVPQL 326 (494)
T ss_dssp TTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHT-TCSEEEECSSCSTTCHHHHHHCCCCCHH
T ss_pred hCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHc-CCCEEEEcCCCCccccccccCCCCccHH
Confidence 999999997654332334445555554 4 777764 58999999999997 9999988552 222221 122
Q ss_pred hhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 328 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 328 ~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
.....+.... ...++++|+.|||.+++|+.++..+|||+|.+|++++..
T Consensus 327 ~~l~~v~~~~-----~~~~ipvia~GGI~~~~di~kala~GAd~V~iGr~~l~~ 375 (494)
T 1vrd_A 327 TAVMECSEVA-----RKYDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFAGT 375 (494)
T ss_dssp HHHHHHHHHH-----HTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTB
T ss_pred HHHHHHHHHH-----hhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHhcC
Confidence 2223333221 113689999999999999999999999999999999753
No 79
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.83 E-value=7.5e-08 Score=100.31 Aligned_cols=185 Identities=15% Similarity=0.156 Sum_probs=126.8
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCC--CHHHHHHHHhc-------CCCCcEEeccccC-CHH-HHHHHHHcC
Q 015899 193 LREDFDPVEIARSYEKGGAACLSILTDEKYFKG--SFENLEAVRSA-------GVKCPLLCKEFIV-DAW-QIYYARTKG 261 (398)
Q Consensus 193 i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~G--s~edL~~Ir~a-------~v~lPVL~KDFIi-d~~-QI~eAr~~G 261 (398)
+.++.++.+..+.+.+.+...+-|+.+.+.+.| +.+|+-..... ...++|-..-... +.. .+.....+|
T Consensus 189 v~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaG 268 (511)
T 3usb_A 189 APVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKAS 268 (511)
T ss_dssp EETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTT
T ss_pred ECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhc
Confidence 446778999999999999999999998888878 56666655432 0122222221112 223 455567899
Q ss_pred cCEEEEeccCCChHHHHHHHHHHHHc--CCcEEE-EcCCHHHHHHHhccCCCcEEeecc--------ccCccc-ccChhh
Q 015899 262 ADAVLLIAAVLPDLDIRYMTKICKLL--GLTALV-EVHDEREMDRVLGIEGIELIGINN--------RNLETF-EVDNSN 329 (398)
Q Consensus 262 ADaVLLiaaiL~~~~L~~Li~~a~~L--GL~~LV-EVht~eEl~rAl~l~Ga~iIGINn--------RdL~tf-~vDl~~ 329 (398)
+|.|.+..+--....+.++++..++. ++.+++ .|.+.+++..+.++ |++.|-+.. |..... ..++..
T Consensus 269 vd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~a-Gad~i~vg~g~gsi~~~~~~~g~g~p~~~~ 347 (511)
T 3usb_A 269 VDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEA-GANVVKVGIGPGSICTTRVVAGVGVPQLTA 347 (511)
T ss_dssp CSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHH-TCSEEEECSSCSTTCCHHHHHCCCCCHHHH
T ss_pred cceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHh-CCCEEEECCCCccccccccccCCCCCcHHH
Confidence 99999987754444566677666653 577766 99999999999997 999885521 111111 122333
Q ss_pred HHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 330 TKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 330 t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
..++.+.. ...++++|+.|||.+++|+.++..+||++|.||++|+....
T Consensus 348 l~~v~~~~-----~~~~iPVIa~GGI~~~~di~kala~GA~~V~vGs~~~~~~e 396 (511)
T 3usb_A 348 VYDCATEA-----RKHGIPVIADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAE 396 (511)
T ss_dssp HHHHHHHH-----HTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTT
T ss_pred HHHHHHHH-----HhCCCcEEEeCCCCCHHHHHHHHHhCchhheecHHHhcCcc
Confidence 33333321 11368999999999999999999999999999999976654
No 80
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=98.82 E-value=1.3e-07 Score=94.95 Aligned_cols=128 Identities=13% Similarity=0.159 Sum_probs=92.5
Q ss_pred CHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHc--CCcEEE-EcCCHHHHHHHhccCCCcEEeec---cccCcc-
Q 015899 250 DAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLL--GLTALV-EVHDEREMDRVLGIEGIELIGIN---NRNLET- 322 (398)
Q Consensus 250 d~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~L--GL~~LV-EVht~eEl~rAl~l~Ga~iIGIN---nRdL~t- 322 (398)
+..++..+.++|+|.|.+.++--......+.++.+++. ++.+++ -|.|.+++..+.++ |++.|.+. .....|
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~a-GAD~I~vG~gpGs~~~tr 187 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEA-GVSAVKVGIGPGSICTTR 187 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHH-TCSEEEECSSCSTTBCHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHc-CCCEEEEecCCCCCCCcc
Confidence 35678888999999999977654444555566666654 788776 59999999999997 99999882 111111
Q ss_pred ----cc-cChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 323 ----FE-VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 323 ----f~-vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
.. .++....++.+.. ...++++|+.|||.++.|+.++..+||++|.||++|+..+.
T Consensus 188 ~~~g~g~p~~~~l~~v~~~~-----~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t~E 248 (366)
T 4fo4_A 188 IVTGVGVPQITAIADAAGVA-----NEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEE 248 (366)
T ss_dssp HHHCCCCCHHHHHHHHHHHH-----GGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTT
T ss_pred cccCcccchHHHHHHHHHHH-----hhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCC
Confidence 11 2233333333221 11368999999999999999999999999999999998654
No 81
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=98.82 E-value=1.9e-08 Score=98.46 Aligned_cols=175 Identities=17% Similarity=0.195 Sum_probs=120.9
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHH--HhcCCCCcEE---------eccc----cCC-HHHHHHHHHc
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAV--RSAGVKCPLL---------CKEF----IVD-AWQIYYARTK 260 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~I--r~a~v~lPVL---------~KDF----Iid-~~QI~eAr~~ 260 (398)
.++..+.....++|+++|-+ +++|- .. ... +....++|++ +.|. .++ .+.+.+|..+
T Consensus 48 ~~~k~lv~~~~~~~~~avl~--~~g~~----~~-a~~~~~~~~~~~glil~l~~~~~l~~~~~~~~l~~~~~~ve~a~~~ 120 (304)
T 1to3_A 48 TDFKVNAAKILSPYASAVLL--DQQFC----YR-QAVEQNAVAKSCAMIVAADDFIPGNGIPVDNVVLDKKINAQAVKRD 120 (304)
T ss_dssp HHHHHHHHHHHGGGCSEEEE--CTTTT----HH-HHHHTTCSCTTSEEEEECEEEEEETTEEEEEEEECSSCCHHHHHHT
T ss_pred hhHHHHHHHHHhcCCCEEEe--CHHHH----HH-HhhcccccCCCCcEEEEECCCCCCCCCccchhhccCchhHHHHHHc
Confidence 56788888888999888654 55432 11 112 1112456765 2222 232 4789999999
Q ss_pred CcCEEEEeccCCCh-------HHHHHHHHHHHHcCCcEEEEcC--------------CHHH-HHHHhccCCCcEEeecc-
Q 015899 261 GADAVLLIAAVLPD-------LDIRYMTKICKLLGLTALVEVH--------------DERE-MDRVLGIEGIELIGINN- 317 (398)
Q Consensus 261 GADaVLLiaaiL~~-------~~L~~Li~~a~~LGL~~LVEVh--------------t~eE-l~rAl~l~Ga~iIGINn- 317 (398)
|||+|-+...+-++ +++.++.+.|++.|+.+++|+- +..+ +..+.++ |+++|++.-
T Consensus 121 GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~l-GaD~iKv~~~ 199 (304)
T 1to3_A 121 GAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDS-GADLYKVEMP 199 (304)
T ss_dssp TCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTS-SCSEEEECCG
T ss_pred CCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHc-CCCEEEeCCC
Confidence 99999755544432 4588888999999999999982 2345 6666776 999999985
Q ss_pred ccCcccccChhhHHHHhhhhccccccc-CCce-EEEecCCCCHH----HHHHHHHcCCCEEEEcccccCC----CChHHH
Q 015899 318 RNLETFEVDNSNTKKLLEGERGEIIRQ-KNII-VVGESGLFTPD----DIAYVQEAGVKAVLVGESIVKQ----DDPGKG 387 (398)
Q Consensus 318 RdL~tf~vDl~~t~~L~~~i~~~~i~~-~~v~-vVAESGI~t~e----D~~~l~~~GadaVLVGeaLmk~----~dp~~~ 387 (398)
.+ .+. +.+...++++.. .+ .+++ +|..||+ +++ .+..++++|++||+||.+|+.. +||.+.
T Consensus 200 ~~--~~g-~~~~~~~vv~~~-----~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~~~~dp~~~ 270 (304)
T 1to3_A 200 LY--GKG-ARSDLLTASQRL-----NGHINMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGRAVWSSVIGLPDTELM 270 (304)
T ss_dssp GG--GCS-CHHHHHHHHHHH-----HHTCCSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESHHHHGGGTTCSCHHHH
T ss_pred cC--CCC-CHHHHHHHHHhc-----cccCCCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEehHHhCccccCCCHHHH
Confidence 22 111 555555555431 01 2457 9999999 663 4888999999999999999999 999999
Q ss_pred H
Q 015899 388 I 388 (398)
Q Consensus 388 i 388 (398)
+
T Consensus 271 ~ 271 (304)
T 1to3_A 271 L 271 (304)
T ss_dssp H
T ss_pred H
Confidence 8
No 82
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=98.81 E-value=2.3e-08 Score=100.73 Aligned_cols=126 Identities=13% Similarity=0.184 Sum_probs=92.7
Q ss_pred HHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHc--CCcEEE-EcCCHHHHHHHhccCCCcEEeecc--------ccC
Q 015899 252 WQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLL--GLTALV-EVHDEREMDRVLGIEGIELIGINN--------RNL 320 (398)
Q Consensus 252 ~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~L--GL~~LV-EVht~eEl~rAl~l~Ga~iIGINn--------RdL 320 (398)
.++..+..+|+|+|.+++..-.+..+.++++.+++. ++.+++ .+++.++++++.++ |++.|.+.. +..
T Consensus 156 ~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~-Gad~I~vg~~~G~~~~~~~~ 234 (404)
T 1eep_A 156 ERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISV-GADCLKVGIGPGSICTTRIV 234 (404)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTT-TCSEEEECSSCSTTSHHHHH
T ss_pred HHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhc-CCCEEEECCCCCcCcCcccc
Confidence 456667789999999876554445677788877765 899997 89999999999997 999998831 111
Q ss_pred cccc-cChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 321 ETFE-VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 321 ~tf~-vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
.... .++.....+.... ...++++|+.|||.+++|+.++..+|||+|.||++++..++
T Consensus 235 ~~~g~p~~~~l~~v~~~~-----~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e 293 (404)
T 1eep_A 235 AGVGVPQITAICDVYEAC-----NNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKE 293 (404)
T ss_dssp HCCCCCHHHHHHHHHHHH-----TTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTT
T ss_pred CCCCcchHHHHHHHHHHH-----hhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCC
Confidence 1111 2333333333321 11368999999999999999999999999999999987643
No 83
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=98.74 E-value=3.5e-07 Score=91.82 Aligned_cols=170 Identities=16% Similarity=0.118 Sum_probs=111.3
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEe--ccccCCHHHHHHHHHcCcCEEEEeccCCChHHH
Q 015899 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC--KEFIVDAWQIYYARTKGADAVLLIAAVLPDLDI 277 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~--KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L 277 (398)
.++|.+..+.|. +-++. .+ -+++++....+. +..++.. ++--.+...+..+.++|+|.|.+.++.-....+
T Consensus 56 ~~lA~A~a~~Gg--~gvi~--~~--~s~ee~~~~i~~-~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~ 128 (361)
T 3r2g_A 56 SNMANFMHSKGA--MGALH--RF--MTIEENIQEFKK-CKGPVFVSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYV 128 (361)
T ss_dssp HHHHHHHHHTTC--EEBCC--SC--SCHHHHHHHHHT-CCSCCBEEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHH
T ss_pred HHHHHHHHHcCC--CEEEe--CC--CCHHHHHHHHhh-cceEEEEEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhH
Confidence 578888887763 44443 11 578777655432 3333322 211012235667788999998887665433445
Q ss_pred HHHHHHHHHc--CCcEEE-EcCCHHHHHHHhccCCCcEEeeccc---cCccc---ccChhhHHHHhhhhcccccccCCce
Q 015899 278 RYMTKICKLL--GLTALV-EVHDEREMDRVLGIEGIELIGINNR---NLETF---EVDNSNTKKLLEGERGEIIRQKNII 348 (398)
Q Consensus 278 ~~Li~~a~~L--GL~~LV-EVht~eEl~rAl~l~Ga~iIGINnR---dL~tf---~vDl~~t~~L~~~i~~~~i~~~~v~ 348 (398)
.++++..++. ++.+++ .|.|.+++..+.++ |++.|-+.+- ..+|- .+.......+ ..+.. ... +
T Consensus 129 ~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~a-GaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI-~~~~~----~~~-P 201 (361)
T 3r2g_A 129 GKTLKSLRQLLGSRCIMAGNVATYAGADYLASC-GADIIKAGIGGGSVCSTRIKTGFGVPMLTCI-QDCSR----ADR-S 201 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHT-TCSEEEECCSSSSCHHHHHHHCCCCCHHHHH-HHHTT----SSS-E
T ss_pred HHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHc-CCCEEEEcCCCCcCccccccCCccHHHHHHH-HHHHH----hCC-C
Confidence 6677777764 899999 79999999999997 9998877432 11110 0111122222 22111 012 8
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 349 VVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 349 vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
+|+.|||.++.|+.++..+|||+|.||+.|+..+.
T Consensus 202 VIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~E 236 (361)
T 3r2g_A 202 IVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAP 236 (361)
T ss_dssp EEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTT
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCcc
Confidence 99999999999999999999999999999998753
No 84
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=98.73 E-value=1.1e-07 Score=87.72 Aligned_cols=185 Identities=10% Similarity=0.027 Sum_probs=122.8
Q ss_pred CHHHHHHHHHHcC--CcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE--eccccCCHHHHHHHHHcCcCEEEEeccCCC
Q 015899 198 DPVEIARSYEKGG--AACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 198 dp~~iA~aY~~~G--A~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (398)
+..+..+..++.| +.++-| .++.|...+++.++.+|+..-+.+|+ .|=..++..-+..+..+|||.|.+-+.. .
T Consensus 14 ~~~~~~~~~~~~~~~v~~~kv-~~~~f~~~G~~~i~~l~~~~p~~~v~lD~kl~dip~t~~~~~~~~Gad~itvh~~~-g 91 (216)
T 1q6o_A 14 TMDSAYETTRLIAEEVDIIEV-GTILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCA-D 91 (216)
T ss_dssp SHHHHHHHHHHHGGGCSEEEE-CHHHHHHHCTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTS-C
T ss_pred CHHHHHHHHHHhcccCCEEEE-CHHHHHHhCHHHHHHHHHhCCCCeEEEEEEecccHHHHHHHHHhCCCCEEEEeccC-C
Confidence 4444445555545 367876 45667777888999999851134544 3433355555667789999999987654 3
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcC-C--HHHHHHHhccCCCcEEeeccccCccccc----ChhhHHHHhhhhcccccccCC
Q 015899 274 DLDIRYMTKICKLLGLTALVEVH-D--EREMDRVLGIEGIELIGINNRNLETFEV----DNSNTKKLLEGERGEIIRQKN 346 (398)
Q Consensus 274 ~~~L~~Li~~a~~LGL~~LVEVh-t--~eEl~rAl~l~Ga~iIGINnRdL~tf~v----Dl~~t~~L~~~i~~~~i~~~~ 346 (398)
...++.+++.+++.|+.+.+++- . ....+.+..+ |...+.... -..+.+. .++...++.+.. +.+
T Consensus 92 ~~~l~~~~~~~~~~g~~~~~~ll~~~t~~~~~~l~~~-~~~~~vl~~-a~~~~~~G~~g~~~~i~~lr~~~------~~~ 163 (216)
T 1q6o_A 92 INTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDA-GIGQVVYHR-SRDAQAAGVAWGEADITAIKRLS------DMG 163 (216)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCCCHHHHHHHHHT-TCCEEEEEC-CHHHHHTTCCCCHHHHHHHHHHH------HTT
T ss_pred HHHHHHHHHHHHHcCCCceeeeeeCCChhhHHHHHhc-CcHHHHHHH-HHHHHhcCCCCCHHHHHHHHHhc------CCC
Confidence 44589999999999999866433 2 4555555554 554433311 0001111 234444443321 235
Q ss_pred ceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 347 IIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 347 v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
++++..|||+ ++.+..+.++|+|.++||++|++++||.++++++..
T Consensus 164 ~~i~v~GGI~-~~~~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~ 209 (216)
T 1q6o_A 164 FKVTVTGGLA-LEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKR 209 (216)
T ss_dssp CEEEEESSCC-GGGGGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHH
T ss_pred CcEEEECCcC-hhhHHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHH
Confidence 6689999996 888999999999999999999999999999888753
No 85
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=98.72 E-value=1.1e-07 Score=95.42 Aligned_cols=180 Identities=19% Similarity=0.197 Sum_probs=117.0
Q ss_pred CCCC--CCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEe-----ccccCCHHHHHHHHH
Q 015899 187 SPSR--GILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC-----KEFIVDAWQIYYART 259 (398)
Q Consensus 187 SPSk--G~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~-----KDFIid~~QI~eAr~ 259 (398)
+|.. |..+++.+ ..+|++..+.|+... +++- -.-+++++.... .+-|+.. +|.-.....+..|..
T Consensus 86 APma~~g~~~~~~e-~~la~aa~~~G~~~~--~s~~--~s~~le~v~~~~---~~~~~~~QLy~~~d~~~~~~~~~ra~~ 157 (368)
T 2nli_A 86 APIAAHGLAHTTKE-AGTARAVSEFGTIMS--ISAY--SGATFEEISEGL---NGGPRWFQIYMAKDDQQNRDILDEAKS 157 (368)
T ss_dssp CCCSCGGGTCTTHH-HHHHHHHHHHTCCEE--ECTT--CSSCHHHHHHHH---TTCCEEEEECCBSSHHHHHHHHHHHHH
T ss_pred cchhhccCCCcHHH-HHHHHHHHHcCCCEE--eech--HhHHHHHHHHhC---CCCCEEEEEeccCCHHHHHHHHHHHHH
Confidence 4554 54444333 688999999887532 3331 223566654432 2345532 332223334667778
Q ss_pred cCcCEEEEeccC---------------CC---------------------------hHHHHHHHHHHH-HcCCcEEE-Ec
Q 015899 260 KGADAVLLIAAV---------------LP---------------------------DLDIRYMTKICK-LLGLTALV-EV 295 (398)
Q Consensus 260 ~GADaVLLiaai---------------L~---------------------------~~~L~~Li~~a~-~LGL~~LV-EV 295 (398)
+|++++.+.+.. ++ ..-..+.++..+ ..++.+++ ++
T Consensus 158 aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v 237 (368)
T 2nli_A 158 DGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGHSGLPVFVKGI 237 (368)
T ss_dssp TTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHHHSSSCEEEEEE
T ss_pred CCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHHHcCCCEEEEcC
Confidence 899888765431 00 000112233333 36888877 79
Q ss_pred CCHHHHHHHhccCCCcEEeecc---ccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEE
Q 015899 296 HDEREMDRVLGIEGIELIGINN---RNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAV 372 (398)
Q Consensus 296 ht~eEl~rAl~l~Ga~iIGINn---RdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaV 372 (398)
++.+++.++.++ |++.|.+.| |.+.....+++...++.+.+ +.++++|+.|||.+++|+.++..+|||+|
T Consensus 238 ~~~e~a~~a~~~-Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v------~~~ipVia~GGI~~g~D~~kalalGAd~V 310 (368)
T 2nli_A 238 QHPEDADMAIKR-GASGIWVSNHGARQLYEAPGSFDTLPAIAERV------NKRVPIVFDSGVRRGEHVAKALASGADVV 310 (368)
T ss_dssp CSHHHHHHHHHT-TCSEEEECCGGGTSCSSCCCHHHHHHHHHHHH------TTSSCEEECSSCCSHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHc-CCCEEEEcCCCcCCCCCCCChHHHHHHHHHHh------CCCCeEEEECCCCCHHHHHHHHHcCCCEE
Confidence 999999999997 999999988 45544444555555555442 23689999999999999999999999999
Q ss_pred EEcccccCC
Q 015899 373 LVGESIVKQ 381 (398)
Q Consensus 373 LVGeaLmk~ 381 (398)
.||+.++..
T Consensus 311 ~iGr~~l~~ 319 (368)
T 2nli_A 311 ALGRPVLFG 319 (368)
T ss_dssp EECHHHHHH
T ss_pred EECHHHHHH
Confidence 999988865
No 86
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=98.69 E-value=5.1e-08 Score=92.82 Aligned_cols=162 Identities=14% Similarity=0.112 Sum_probs=103.4
Q ss_pred HHHHHHHHHHcCCcEEEEec-cCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHH
Q 015899 199 PVEIARSYEKGGAACLSILT-DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDI 277 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVLT-d~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L 277 (398)
..++.++..++||++|=+-- .---....++.++.+|+ +++||+---+...+. ..|+|++++-. |.+++-
T Consensus 22 t~~~~~~l~~~GaD~ielG~S~Gvt~~~~~~~v~~ir~--~~~Pivlm~y~~n~i------~~G~dg~iiPd--Lp~ee~ 91 (240)
T 1viz_A 22 PDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR--FLVPCVLEVSAIEAI------VPGFDLYFIPS--VLNSKN 91 (240)
T ss_dssp CHHHHHHHHTSCCSEEEECC----CHHHHHHHHHHHTT--SSSCEEEECSCGGGC------CSCCSEEEEEE--ETTBSS
T ss_pred cHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhhC--cCCCEEEecCccccc------cCCCCEEEEcc--cCcccC
Confidence 35678999999999998821 00001115677888886 699998533322222 57999987743 332222
Q ss_pred HHH-----HHHHHHcC-----CcEEEE---c----------------CCHHHHHHHhccCCC----cEEeeccccCcccc
Q 015899 278 RYM-----TKICKLLG-----LTALVE---V----------------HDEREMDRVLGIEGI----ELIGINNRNLETFE 324 (398)
Q Consensus 278 ~~L-----i~~a~~LG-----L~~LVE---V----------------ht~eEl~rAl~l~Ga----~iIGINnRdL~tf~ 324 (398)
.++ ...+++.| ++.+-+ + .+.+.+.+..+. |. .+|=... ..-.
T Consensus 92 ~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~-g~~~~~~~VYl~s---~G~~ 167 (240)
T 1viz_A 92 ADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARV-SELLQLPIFYLEY---SGVL 167 (240)
T ss_dssp GGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHH-HHHTTCSEEEEEC---TTSC
T ss_pred hhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHh-CcccCCCEEEEeC---CCcc
Confidence 333 56678888 887652 1 345666665543 31 2321111 1113
Q ss_pred cChhhHHHHhhhhcccccccC-CceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 325 VDNSNTKKLLEGERGEIIRQK-NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 325 vDl~~t~~L~~~i~~~~i~~~-~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
.+.+...++.+. . +++++.++||+|+++++++.+ |||+|+||+++++.++
T Consensus 168 ~~~~~i~~i~~~--------~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~~~~ 218 (240)
T 1viz_A 168 GDIEAVKKTKAV--------LETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYEDFD 218 (240)
T ss_dssp CCHHHHHHHHHT--------CSSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHHCHH
T ss_pred ChHHHHHHHHHh--------cCCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHhCHH
Confidence 455555565543 3 678999999999999999999 9999999999998655
No 87
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.69 E-value=3.3e-08 Score=102.61 Aligned_cols=179 Identities=15% Similarity=0.201 Sum_probs=117.7
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeccCCcCCC--CHHHHHHHHhcCCCCcEEeccc-------------cCCHHHHHHHHH
Q 015899 195 EDFDPVEIARSYEKGGAACLSILTDEKYFKG--SFENLEAVRSAGVKCPLLCKEF-------------IVDAWQIYYART 259 (398)
Q Consensus 195 ~~~dp~~iA~aY~~~GA~aISVLTd~~~F~G--s~edL~~Ir~a~v~lPVL~KDF-------------Iid~~QI~eAr~ 259 (398)
++.+..+..+.+.+.+...+-|+.+.+-+.| +.+|+.... .-|..+||. .-+...+..+..
T Consensus 166 ~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~----~~p~a~~d~~grL~v~aavG~~~d~~~~a~~l~~ 241 (496)
T 4fxs_A 166 EGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAE----SKPNACKDEQGRLRVGAAVGAAPGNEERVKALVE 241 (496)
T ss_dssp CC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----C----CCTTCCBCTTSCBCCEEECCSSSCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhh----cccchhhhcccceeeeeeeccccchHHHHHHHHh
Confidence 4556677777788888899999988877777 445554432 223333331 123456667788
Q ss_pred cCcCEEEEeccCCChHHHHHHHHHHHH-c-CCcEEE-EcCCHHHHHHHhccCCCcEEeec--------cccCccc-ccCh
Q 015899 260 KGADAVLLIAAVLPDLDIRYMTKICKL-L-GLTALV-EVHDEREMDRVLGIEGIELIGIN--------NRNLETF-EVDN 327 (398)
Q Consensus 260 ~GADaVLLiaaiL~~~~L~~Li~~a~~-L-GL~~LV-EVht~eEl~rAl~l~Ga~iIGIN--------nRdL~tf-~vDl 327 (398)
+|+|.|.+..+.-....+.++++..++ . ++.+++ -+.+.++++.+.++ |++.|-+. .|..... ..++
T Consensus 242 aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~a-GaD~I~Vg~g~Gs~~~tr~~~g~g~p~~ 320 (496)
T 4fxs_A 242 AGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEA-GVSAVKVGIGPGSICTTRIVTGVGVPQI 320 (496)
T ss_dssp TTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHH-TCSEEEECSSCCTTBCHHHHHCCCCCHH
T ss_pred ccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHh-CCCEEEECCCCCcCcccccccCCCccHH
Confidence 999999998876544455666666665 3 788877 59999999999997 99988663 1111112 1234
Q ss_pred hhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 328 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 328 ~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
....++.+.+ ...++++|+.|||.+++|+.++..+||++|.||++|.....
T Consensus 321 ~~i~~v~~~~-----~~~~iPVIa~GGI~~~~di~kala~GAd~V~iGs~f~~t~E 371 (496)
T 4fxs_A 321 TAIADAAGVA-----NEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEE 371 (496)
T ss_dssp HHHHHHHHHH-----GGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTT
T ss_pred HHHHHHHHHh-----ccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEecHHHhcCCC
Confidence 4444554432 12368999999999999999999999999999999987653
No 88
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=98.69 E-value=1.4e-07 Score=92.26 Aligned_cols=124 Identities=15% Similarity=0.157 Sum_probs=93.3
Q ss_pred HHHHHHHcCcCEEEEeccCCCh------HHHHHHHHHHHHcCCcEEEEcCC-------HH----HHHHHhccCCCcEEee
Q 015899 253 QIYYARTKGADAVLLIAAVLPD------LDIRYMTKICKLLGLTALVEVHD-------ER----EMDRVLGIEGIELIGI 315 (398)
Q Consensus 253 QI~eAr~~GADaVLLiaaiL~~------~~L~~Li~~a~~LGL~~LVEVht-------~e----El~rAl~l~Ga~iIGI 315 (398)
++.+|...|||+|.+-..+-++ +++.++.+.|+..||-+++|.+- .+ ....+.++ ||++|.+
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~el-GAD~VKt 208 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEM-GAQIIKT 208 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHT-TCSEEEE
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHh-CCCEEEe
Confidence 6889999999999997665542 23557788888899999997642 22 34556677 9999999
Q ss_pred ccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCH-----HHHHHHHHcCCCEEEEcccccCCCChHHHHHh
Q 015899 316 NNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTP-----DDIAYVQEAGVKAVLVGESIVKQDDPGKGITG 390 (398)
Q Consensus 316 NnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~-----eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~ 390 (398)
+ ++. +...++... ..+++|++||+++. +.++.+.++|++|+.||.+|+..+||.+.++.
T Consensus 209 ~---~t~-----e~~~~vv~~--------~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~~~a 272 (295)
T 3glc_A 209 Y---YVE-----KGFERIVAG--------CPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKA 272 (295)
T ss_dssp E---CCT-----TTHHHHHHT--------CSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHH
T ss_pred C---CCH-----HHHHHHHHh--------CCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHHHHH
Confidence 8 221 233555543 24789999999853 25667779999999999999999999988887
Q ss_pred hhc
Q 015899 391 LFG 393 (398)
Q Consensus 391 L~~ 393 (398)
|..
T Consensus 273 l~~ 275 (295)
T 3glc_A 273 VQA 275 (295)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
No 89
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.67 E-value=3e-07 Score=95.19 Aligned_cols=183 Identities=11% Similarity=0.160 Sum_probs=117.8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEecc-------------ccCCHHHHHHHHHc
Q 015899 194 REDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKE-------------FIVDAWQIYYARTK 260 (398)
Q Consensus 194 ~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KD-------------FIid~~QI~eAr~~ 260 (398)
.++.+..+..+.+.+.+...+-|+.+.+-+.|=...-..++. ..-|.-++| ..-...++..+..+
T Consensus 189 ~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~--~~~~~~~~~~~~rl~vga~vG~~~~~~~~a~~~~~a 266 (514)
T 1jcn_A 189 PAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKN--RDYPLASKDSQKQLLCGAAVGTREDDKYRLDLLTQA 266 (514)
T ss_dssp ETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSC--CCCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHH--hhCcchhcccCCceeeeeEecCchhhHHHHHHHHHc
Confidence 345556667777778888888888777655553221111111 112211111 00123456677889
Q ss_pred CcCEEEEeccCCChHHHHHHHHHHHHc--CCcEEE-EcCCHHHHHHHhccCCCcEEeec--------cccCcccccChhh
Q 015899 261 GADAVLLIAAVLPDLDIRYMTKICKLL--GLTALV-EVHDEREMDRVLGIEGIELIGIN--------NRNLETFEVDNSN 329 (398)
Q Consensus 261 GADaVLLiaaiL~~~~L~~Li~~a~~L--GL~~LV-EVht~eEl~rAl~l~Ga~iIGIN--------nRdL~tf~vDl~~ 329 (398)
|+|+|.+.++.-......++++.+++. ++.+++ +|++.+++.++.++ |++.|-+. +|...........
T Consensus 267 G~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~a-Gad~I~vg~~~G~~~~t~~~~~~g~~~~~ 345 (514)
T 1jcn_A 267 GVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDA-GVDGLRVGMGCGSICITQEVMACGRPQGT 345 (514)
T ss_dssp TCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHH-TCSEEEECSSCSCCBTTBCCCSCCCCHHH
T ss_pred CCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHc-CCCEEEECCCCCcccccccccCCCccchh
Confidence 999999977654333445667766664 899887 89999999999997 99988442 1222222222333
Q ss_pred HHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 330 TKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 330 t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
+..++..+.. ..++++|+.|||.+++|+.++..+||++|.+|++|+..++
T Consensus 346 ~~~~~~~~~~----~~~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~~~e 395 (514)
T 1jcn_A 346 AVYKVAEYAR----RFGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTE 395 (514)
T ss_dssp HHHHHHHHHG----GGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTSTT
T ss_pred HHHHHHHHHh----hCCCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcCCc
Confidence 3444443211 1368999999999999999999999999999999988653
No 90
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=98.61 E-value=2e-08 Score=95.28 Aligned_cols=168 Identities=12% Similarity=0.068 Sum_probs=104.4
Q ss_pred HHHHHHHHHHcCCcEEEEec-cCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHH
Q 015899 199 PVEIARSYEKGGAACLSILT-DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDI 277 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVLT-d~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L 277 (398)
..+++++..++||++|=+=- ..--...-++.++.+|+ .++||+.--+-..+. .+|+|++++-. ++ +++-
T Consensus 22 t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~--~~~Pivl~~y~~n~i------~~gvDg~iipd-Lp-~ee~ 91 (234)
T 2f6u_A 22 TDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQ--YGLPIVVEPSDPSNV------VYDVDYLFVPT-VL-NSAD 91 (234)
T ss_dssp CHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTT--SCCCEEECCSSCCCC------CCCSSEEEEEE-ET-TBSB
T ss_pred cHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcC--CCCCEEEecCCcchh------hcCCCEEEEcc-cC-CCCC
Confidence 35678999999999998832 10000113445666665 589987533322232 67999998744 33 2222
Q ss_pred HHHH-----HHH-------HHcC-----CcEEEE-------------cC------CHHHHHHHhccCCC-----cEEeec
Q 015899 278 RYMT-----KIC-------KLLG-----LTALVE-------------VH------DEREMDRVLGIEGI-----ELIGIN 316 (398)
Q Consensus 278 ~~Li-----~~a-------~~LG-----L~~LVE-------------Vh------t~eEl~rAl~l~Ga-----~iIGIN 316 (398)
.+++ +.+ +..| ++.+-+ +. +.+.+....+. |. .+|=..
T Consensus 92 ~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~~-g~~~l~~~~Vyl~ 170 (234)
T 2f6u_A 92 GDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALV-GEKLFNLPIIYIE 170 (234)
T ss_dssp GGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHH-HHHTTCCSEEEEE
T ss_pred HHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHHh-hhhhcCCCEEEEe
Confidence 2222 334 5567 888775 22 56556665554 54 332222
Q ss_pred cccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHh
Q 015899 317 NRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITG 390 (398)
Q Consensus 317 nRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~ 390 (398)
. ..-..+.+...++.+.. .+++++..+||+|+++++++.+ |||+|+||+++++. |.+++++
T Consensus 171 ~---~G~~~~~~~i~~i~~~~-------~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~~--~~~~~~~ 231 (234)
T 2f6u_A 171 Y---SGTYGNPELVAEVKKVL-------DKARLFYGGGIDSREKAREMLR-YADTIIVGNVIYEK--GIDAFLE 231 (234)
T ss_dssp C---TTSCCCHHHHHHHHHHC-------SSSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHHH--CHHHHHT
T ss_pred C---CCCcchHHHHHHHHHhC-------CCCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHhC--HHHHHHh
Confidence 1 11244555556665531 1678999999999999999999 99999999999975 5566644
No 91
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.55 E-value=3.2e-06 Score=86.69 Aligned_cols=182 Identities=14% Similarity=0.127 Sum_probs=119.9
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeccCCcCCC--CHHHHHHHHhc---C--CCCcEEecccc----CCHHHHHHHHHcCc
Q 015899 194 REDFDPVEIARSYEKGGAACLSILTDEKYFKG--SFENLEAVRSA---G--VKCPLLCKEFI----VDAWQIYYARTKGA 262 (398)
Q Consensus 194 ~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~G--s~edL~~Ir~a---~--v~lPVL~KDFI----id~~QI~eAr~~GA 262 (398)
.++.+..+.++.+.+.+...+-|+.+.+-+.| +.+||-..... . ...+++..-.+ .....+..+..+|+
T Consensus 167 ~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~~l~~~G~ 246 (491)
T 1zfj_A 167 AVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGA 246 (491)
T ss_dssp ETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHHHHHHHcCC
Confidence 34678899999999999999999987766666 56666655431 0 01112211111 12355667778899
Q ss_pred CEEEEeccCCChHHHHHHHHH-HHHc-CCcEEE-EcCCHHHHHHHhccCCCcEEeecc--------ccCcccc-cChhhH
Q 015899 263 DAVLLIAAVLPDLDIRYMTKI-CKLL-GLTALV-EVHDEREMDRVLGIEGIELIGINN--------RNLETFE-VDNSNT 330 (398)
Q Consensus 263 DaVLLiaaiL~~~~L~~Li~~-a~~L-GL~~LV-EVht~eEl~rAl~l~Ga~iIGINn--------RdL~tf~-vDl~~t 330 (398)
|+|.+..+.-......++++. .... ++.++. .+.+.+.+.+++++ |++.|-+++ |.+.++. +.+...
T Consensus 247 d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~-Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l 325 (491)
T 1zfj_A 247 DAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDA-GVDVVKVGIGPGSICTTRVVAGVGVPQVTAI 325 (491)
T ss_dssp SEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHT-TCSEEEECSSCCTTBCHHHHTCCCCCHHHHH
T ss_pred CeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHc-CCCEEEECccCCcceEEeeecCCCCCcHHHH
Confidence 999987653322333344433 3344 566543 56789999999997 999986652 2222222 223333
Q ss_pred HHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 331 KKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 331 ~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
.++.... ...++++|+.|||.+++|+.++..+||++|.+|++++..
T Consensus 326 ~~~~~~~-----~~~~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~~~ 371 (491)
T 1zfj_A 326 YDAAAVA-----REYGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFAGT 371 (491)
T ss_dssp HHHHHHH-----HHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred HHHHHHH-----hhcCCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhhCC
Confidence 3443321 113689999999999999999999999999999999864
No 92
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.51 E-value=1.6e-06 Score=83.20 Aligned_cols=173 Identities=16% Similarity=0.164 Sum_probs=107.3
Q ss_pred HHHHHHHHHHcCCcEEEEe---ccCCcCCC---------------CH-HHHHHHHhcCCCCcEEeccccCCHHH------
Q 015899 199 PVEIARSYEKGGAACLSIL---TDEKYFKG---------------SF-ENLEAVRSAGVKCPLLCKEFIVDAWQ------ 253 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVL---Td~~~F~G---------------s~-edL~~Ir~a~v~lPVL~KDFIid~~Q------ 253 (398)
-.+++++++++||+.|=+- +||-+= | ++ ..|..+++....+|++.--+.-+-++
T Consensus 30 t~~~~~~l~~~GaD~iElGiPfSDP~aD-GpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G~e~F 108 (252)
T 3tha_A 30 SEAFLQRLDQSPIDILELGVAYSDPIAD-GEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGLEKF 108 (252)
T ss_dssp HHHHHHTGGGSSCSEEEEECCCSCCCSC-CCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHHCHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCC-cHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHhhHHHH
Confidence 3456777778888877663 222211 1 11 22333443212479876554322222
Q ss_pred HHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEE--EEc-CCHHHHHHHhccCCCcEEeeccccCcc-cccC-hh
Q 015899 254 IYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTAL--VEV-HDEREMDRVLGIEGIELIGINNRNLET-FEVD-NS 328 (398)
Q Consensus 254 I~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~L--VEV-ht~eEl~rAl~l~Ga~iIGINnRdL~t-f~vD-l~ 328 (398)
+..++++|+|++++- -|+.++..++.+.|+..|++.+ +=- .+.+.++++.+. +..+|-+..+.-.| -... .+
T Consensus 109 ~~~~~~aGvdG~Iip--DLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~-a~gFiY~Vs~~GvTG~~~~~~~ 185 (252)
T 3tha_A 109 VKKAKSLGICALIVP--ELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKH-AKGFIYLLASIGITGTKSVEEA 185 (252)
T ss_dssp HHHHHHTTEEEEECT--TCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTT-CCSCEEEECCSCSSSCSHHHHH
T ss_pred HHHHHHcCCCEEEeC--CCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHh-CCCeEEEEecCCCCCcccCCCH
Confidence 557889999998874 3787889999999999999873 332 347888877775 33333332222111 1111 11
Q ss_pred hHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015899 329 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 329 ~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 380 (398)
...++++.++. . .+.+++..+||+++++++.+.+ +||||+||++|++
T Consensus 186 ~~~~~v~~vr~--~--~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk 232 (252)
T 3tha_A 186 ILQDKVKEIRS--F--TNLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVK 232 (252)
T ss_dssp HHHHHHHHHHT--T--CCSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHH
T ss_pred HHHHHHHHHHH--h--cCCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHH
Confidence 22344444322 1 3578999999999999999987 5999999999986
No 93
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=98.44 E-value=3.9e-06 Score=82.70 Aligned_cols=170 Identities=11% Similarity=0.006 Sum_probs=101.5
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHH---HHHHcC--cCEEEEeccCCCh
Q 015899 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIY---YARTKG--ADAVLLIAAVLPD 274 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~---eAr~~G--ADaVLLiaaiL~~ 274 (398)
.++|.+..+.|.-.+-+..++. -..+.++.+++. .+|+-.. +..++..+. .+...| +|.|.+..+.=..
T Consensus 60 ~~la~a~~~~gg~g~~~~~~~~---~~~~~i~~~~~~--g~~v~v~-~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~ 133 (336)
T 1ypf_A 60 ERIATYLAENNYFYIMHRFQPE---KRISFIRDMQSR--GLIASIS-VGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHS 133 (336)
T ss_dssp HHHHHHHHHTTCCCCCCCSSGG---GHHHHHHHHHHT--TCCCEEE-ECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCS
T ss_pred HHHHHHHHhCCCEEEecCCCCH---HHHHHHHHHHhc--CCeEEEe-CCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCc
Confidence 5676654554433332222221 123344555543 4555433 444444333 345778 9998876532122
Q ss_pred HHHHHHHHHHHH-c-CCcEEEE-cCCHHHHHHHhccCCCcEEeecccc---Ccccc---cChh-hHHHHhhhhccccccc
Q 015899 275 LDIRYMTKICKL-L-GLTALVE-VHDEREMDRVLGIEGIELIGINNRN---LETFE---VDNS-NTKKLLEGERGEIIRQ 344 (398)
Q Consensus 275 ~~L~~Li~~a~~-L-GL~~LVE-Vht~eEl~rAl~l~Ga~iIGINnRd---L~tf~---vDl~-~t~~L~~~i~~~~i~~ 344 (398)
....++++..++ . +..++.- +.+.++++++.++ |++.|-+.|.. +.+-. .... .+..++..+.. .
T Consensus 134 ~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~a-Gad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~----~ 208 (336)
T 1ypf_A 134 NAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENA-GADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAK----A 208 (336)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHH-TCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHH----T
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHc-CCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHH----H
Confidence 334555555544 3 5666666 8899999999997 99998885532 21100 0000 02223332211 1
Q ss_pred CCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015899 345 KNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 345 ~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 380 (398)
.++++|+.|||.++.|+.++..+||++|.||++++.
T Consensus 209 ~~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~ 244 (336)
T 1ypf_A 209 ASKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAG 244 (336)
T ss_dssp CSSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTT
T ss_pred cCCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhc
Confidence 268999999999999999999999999999999994
No 94
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.39 E-value=2.9e-06 Score=82.63 Aligned_cols=177 Identities=16% Similarity=0.183 Sum_probs=105.2
Q ss_pred HHHHHHHHHHcCCcEEEEeccCC-cCCC-CHHHHHHHHhcCCCCcEEeccc--cCCHHHHHHHHHcCcCEEEEeccCCCh
Q 015899 199 PVEIARSYEKGGAACLSILTDEK-YFKG-SFENLEAVRSAGVKCPLLCKEF--IVDAWQIYYARTKGADAVLLIAAVLPD 274 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVLTd~~-~F~G-s~edL~~Ir~a~v~lPVL~KDF--Iid~~QI~eAr~~GADaVLLiaaiL~~ 274 (398)
..++++...+.|+++|-|-|+.- .|.. -.+.+..||+. +++||+-|.- +=+..|| .-|||++++. ++|+.
T Consensus 55 ~~~~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~-~~lPvil~fPP~~g~~~~i----~~~aDa~l~p-svlNs 128 (286)
T 3vk5_A 55 AVEKAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAA-TPLPVVLHFPPRPGAGFPV----VRGADALLLP-ALLGS 128 (286)
T ss_dssp HHHHHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHHH-CSSCEEEECCCBTTTBSCC----CTTCSEEEEE-EETTB
T ss_pred HHHHHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHHh-CCCCEEEECCCCCCCcccc----ccCCCEEEEE-EEecC
Confidence 33478888889999999964411 1222 23445667876 7999987432 0122333 3499998874 56643
Q ss_pred HHHHHHHHH---------H----HHcCCcEEEE----cC---------------CHHHH--H-H---HhccCCCcEEeec
Q 015899 275 LDIRYMTKI---------C----KLLGLTALVE----VH---------------DEREM--D-R---VLGIEGIELIGIN 316 (398)
Q Consensus 275 ~~L~~Li~~---------a----~~LGL~~LVE----Vh---------------t~eEl--~-r---Al~l~Ga~iIGIN 316 (398)
.+-.+++.. . +.+| +++-| |+ +.+.+ . . +..+ |.+++=..
T Consensus 129 ~n~~~i~g~~~~~~aa~~v~~~~~~~g-e~ip~gYL~v~~g~k~V~fv~~~~~~~~e~A~~~aYa~~gad~-G~~lV~LD 206 (286)
T 3vk5_A 129 GDDYFVWKSFLETLAAFPGRIPREEWP-ELLLTVALTFGEDPRTGDLLGTVPVSTASTEEIDRYLHVARAF-GFHMVYLY 206 (286)
T ss_dssp SSHHHHTHHHHHHHHHCSTTSCGGGCC-EEEEEEEEECSCCHHHHHHHCBCCCCCSSSHHHHHHHHHHHHT-TCSEEEEE
T ss_pred CCcccccCcHHHHHHhHHHHHHHHHhC-CcceEEEEEECCCCceeeeeCCCCCCCHHHHHHHHHHHHHHHc-CCCEEEEc
Confidence 344444433 1 3344 44222 22 22211 1 1 1122 44555333
Q ss_pred cccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 317 NRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 317 nRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
- ..-.++++...++.+.+ +.+++++..|||+|++|++++.++|||+|+||+++++.+ .-+.++++.+
T Consensus 207 ~---~~~~v~~e~V~~I~~~~------~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d~-~Pelv~e~a~ 273 (286)
T 3vk5_A 207 S---RNEHVPPEVVRHFRKGL------GPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQPD-WRSALAEIAG 273 (286)
T ss_dssp C---SSSCCCHHHHHHHHHHS------CTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSSTT-HHHHHHHHHC
T ss_pred C---CCCcCCHHHHHHHHHhc------CCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcCC-CHHHHHHHHH
Confidence 1 11334555555655531 116789999999999999999999999999999999975 3356666654
No 95
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=98.34 E-value=5.3e-06 Score=82.56 Aligned_cols=122 Identities=14% Similarity=0.109 Sum_probs=83.3
Q ss_pred HHHHHHc--CcCEEEEeccCCChHHHHHHHHHHHHc--CCcEEE-EcCCHHHHHHHhccCCCcEEeecc--------ccC
Q 015899 254 IYYARTK--GADAVLLIAAVLPDLDIRYMTKICKLL--GLTALV-EVHDEREMDRVLGIEGIELIGINN--------RNL 320 (398)
Q Consensus 254 I~eAr~~--GADaVLLiaaiL~~~~L~~Li~~a~~L--GL~~LV-EVht~eEl~rAl~l~Ga~iIGINn--------RdL 320 (398)
+...... |+|+|.+..+.-....+.+.++..++. ++.+++ -|.|.+++.++.++ |++.|-+.+ |.+
T Consensus 123 ~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~a-GaD~I~v~~g~G~~~~~r~~ 201 (351)
T 2c6q_A 123 LEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILS-GADIIKVGIGPGSVCTTRKK 201 (351)
T ss_dssp HHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHT-TCSEEEECSSCSTTBCHHHH
T ss_pred HHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHh-CCCEEEECCCCCcCcCcccc
Confidence 3344454 999887765433334455666665553 787775 68899999999997 999986643 111
Q ss_pred ccccc-ChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 321 ETFEV-DNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 321 ~tf~v-Dl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
..... .+....++.... ...++++|+.|||.++.|+.++..+||++|.||+.++..
T Consensus 202 ~g~~~p~~~~l~~v~~~~-----~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~ 258 (351)
T 2c6q_A 202 TGVGYPQLSAVMECADAA-----HGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGH 258 (351)
T ss_dssp HCBCCCHHHHHHHHHHHH-----HHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred CCCCccHHHHHHHHHHHH-----hhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcC
Confidence 11111 122223333221 113689999999999999999999999999999999864
No 96
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=98.33 E-value=1.4e-05 Score=77.97 Aligned_cols=163 Identities=23% Similarity=0.322 Sum_probs=112.0
Q ss_pred HHHHHHHHcCCcEEEEeccCCcCCC---CHHHHHHHHhcCCCCcEE------eccccCCHH-------HHHHHHHcCcCE
Q 015899 201 EIARSYEKGGAACLSILTDEKYFKG---SFENLEAVRSAGVKCPLL------CKEFIVDAW-------QIYYARTKGADA 264 (398)
Q Consensus 201 ~iA~aY~~~GA~aISVLTd~~~F~G---s~edL~~Ir~a~v~lPVL------~KDFIid~~-------QI~eAr~~GADa 264 (398)
+-|.+.+++||+.|-.. +.-+.+| |+..++.+|+. +++||- -.||+.++. .|..++++|||.
T Consensus 50 ~~a~~A~~gGAdRIELc-~~l~~GGlTPS~g~i~~a~~~-~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdG 127 (287)
T 3iwp_A 50 ESAVNAERGGADRIELC-SGLSEGGTTPSMGVLQVVKQS-VQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADG 127 (287)
T ss_dssp HHHHHHHHHTCSEEEEC-BCGGGTCBCCCHHHHHHHHTT-CCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCEEEEC-CCCCCCCCCCCHHHHHHHHHh-cCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Confidence 56777888999999986 4455555 88999999986 899985 268999965 467889999999
Q ss_pred EEEec--c--CCChHHHHHHHHHHHHcCCcE---EEEcCCH-HHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhh
Q 015899 265 VLLIA--A--VLPDLDIRYMTKICKLLGLTA---LVEVHDE-REMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEG 336 (398)
Q Consensus 265 VLLia--a--iL~~~~L~~Li~~a~~LGL~~---LVEVht~-eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~ 336 (398)
|.+.+ . -++.+.+++|++.++.++++. +=++.|. +-++...++ |++-|=+..- -.+-.-.++...+|...
T Consensus 128 vVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~l-GvdrILTSG~-~~~a~~Gl~~Lk~Lv~~ 205 (287)
T 3iwp_A 128 LVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTL-GFERVLTSGC-DSSALEGLPLIKRLIEQ 205 (287)
T ss_dssp EEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHH-TCSEEEECTT-SSSTTTTHHHHHHHHHH
T ss_pred EEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHc-CCCEEECCCC-CCChHHhHHHHHHHHHH
Confidence 99986 2 245567889998887666552 1122233 344555565 7765544322 11222346666666654
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHH-cCCCEEEE
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQE-AGVKAVLV 374 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~-~GadaVLV 374 (398)
. ...+.+++.||| +++.+..+.+ .|++.|=.
T Consensus 206 a------~~rI~ImaGGGV-~~~Ni~~l~~~tG~~~~H~ 237 (287)
T 3iwp_A 206 A------KGRIVVMPGGGI-TDRNLQRILEGSGATEFHC 237 (287)
T ss_dssp H------TTSSEEEECTTC-CTTTHHHHHHHHCCSEEEE
T ss_pred h------CCCCEEEECCCc-CHHHHHHHHHhhCCCEEeE
Confidence 1 235789999999 7777888766 89987743
No 97
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.31 E-value=1.3e-05 Score=76.76 Aligned_cols=154 Identities=18% Similarity=0.132 Sum_probs=96.5
Q ss_pred HHHhcCCCCcEEeccccCCHHH---HHHHHH--cCcCEEEEecc----------CC-ChHHHHHHHHHHHHc-CCcEEE-
Q 015899 232 AVRSAGVKCPLLCKEFIVDAWQ---IYYART--KGADAVLLIAA----------VL-PDLDIRYMTKICKLL-GLTALV- 293 (398)
Q Consensus 232 ~Ir~a~v~lPVL~KDFIid~~Q---I~eAr~--~GADaVLLiaa----------iL-~~~~L~~Li~~a~~L-GL~~LV- 293 (398)
.+++...+.|+...=+.-++.+ ..+... +|+|+|-|... .. +...+.++++.+++. +..+++
T Consensus 91 ~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk 170 (311)
T 1ep3_A 91 WLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVK 170 (311)
T ss_dssp HHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4554213678764333223333 222233 89999988643 11 334467888877764 888887
Q ss_pred ---EcCCHHH-HHHHhccCCCcEEeecccc------Ccc-----------ccc--ChhhHHHHhhhhcccccccCCceEE
Q 015899 294 ---EVHDERE-MDRVLGIEGIELIGINNRN------LET-----------FEV--DNSNTKKLLEGERGEIIRQKNIIVV 350 (398)
Q Consensus 294 ---EVht~eE-l~rAl~l~Ga~iIGINnRd------L~t-----------f~v--Dl~~t~~L~~~i~~~~i~~~~v~vV 350 (398)
.+.+..+ ++.+.++ |++.|-+.|.. ..+ +.- +.....+++..++. ..++++|
T Consensus 171 ~~~~~~~~~~~a~~l~~~-G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~----~~~ipvi 245 (311)
T 1ep3_A 171 LSPNVTDIVPIAKAVEAA-GADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQ----DVDIPII 245 (311)
T ss_dssp ECSCSSCSHHHHHHHHHT-TCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHT----TCSSCEE
T ss_pred ECCChHHHHHHHHHHHHc-CCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHH----hcCCCEE
Confidence 4456566 5667776 99998885421 111 110 11112233333221 1268999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHh
Q 015899 351 GESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITG 390 (398)
Q Consensus 351 AESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~ 390 (398)
+.|||.+++|+.++.++|||+|.||++++..++..+.+++
T Consensus 246 a~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~~~~~i~~ 285 (311)
T 1ep3_A 246 GMGGVANAQDVLEMYMAGASAVAVGTANFADPFVCPKIID 285 (311)
T ss_dssp ECSSCCSHHHHHHHHHHTCSEEEECTHHHHCTTHHHHHHH
T ss_pred EECCcCCHHHHHHHHHcCCCEEEECHHHHcCcHHHHHHHH
Confidence 9999999999999999999999999999998876655543
No 98
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=98.31 E-value=3.1e-06 Score=79.05 Aligned_cols=173 Identities=14% Similarity=0.065 Sum_probs=116.4
Q ss_pred CcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEe--ccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcC
Q 015899 211 AACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC--KEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLG 288 (398)
Q Consensus 211 A~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~--KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LG 288 (398)
+..+.|- ++-|+..+++-++.+|+...+.+|+. |=.=++..-...+..+|||.|.+-+. -+...++..++.+++.|
T Consensus 31 ~~~ikvg-~~lf~~~G~~~v~~l~~~~p~~~iflDlKl~Dip~t~~~~~~~~Gad~vtVH~~-~g~~~l~~a~~~~~~~g 108 (221)
T 3exr_A 31 VDVIEAG-TVCLLQVGSELVEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICS-ATIPTMKAARKAIEDIN 108 (221)
T ss_dssp CSEEEEC-HHHHHHHCTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHTTTCSEEEEETT-SCHHHHHHHHHHHHHHC
T ss_pred ceEEEEC-HHHHHhcCHHHHHHHHHhCCCCcEEEEEEeeccHHHHHHHHHHcCCCEEEEecc-CCHHHHHHHHHHHHhcC
Confidence 7889994 45566677888999987511455542 22223444444567889999888553 24456899999888887
Q ss_pred ---CcEEEEcCC---HHHHHHHhccCCCcEEeeccccCc---ccccChhhHHHHhhhhcccccccCCceEEEecCCCCHH
Q 015899 289 ---LTALVEVHD---EREMDRVLGIEGIELIGINNRNLE---TFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPD 359 (398)
Q Consensus 289 ---L~~LVEVht---~eEl~rAl~l~Ga~iIGINnRdL~---tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~e 359 (398)
..+.|.+.+ .++++..++. +++.+.++.-... ......+....+.+. ...+..+..-||| +++
T Consensus 109 ~~~~~~~Vt~lts~~~~~~~~~~~~-~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~------~~~~~~i~v~gGI-~~~ 180 (221)
T 3exr_A 109 PDKGEIQVELYGDWTYDQAQQWLDA-GISQAIYHQSRDALLAGETWGEKDLNKVKKL------IEMGFRVSVTGGL-SVD 180 (221)
T ss_dssp TTTCEEEEECCSSCCHHHHHHHHHT-TCCEEEEECCHHHHHHTCCCCHHHHHHHHHH------HHHTCEEEEESSC-CGG
T ss_pred CCcceEEEEEcCCCCHHHHHHHHcC-CHHHHHHHHHHhcCCCccccCHHHHHHHHHh------hcCCceEEEECCC-CHH
Confidence 667777754 6677667775 7766655421111 111122333333322 1235667889999 888
Q ss_pred HHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 360 DIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 360 D~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
++..+.++|+|.++||++|++++||.++++++..
T Consensus 181 ~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~ 214 (221)
T 3exr_A 181 TLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKD 214 (221)
T ss_dssp GGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999888753
No 99
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.22 E-value=1.8e-05 Score=79.21 Aligned_cols=149 Identities=13% Similarity=0.181 Sum_probs=89.0
Q ss_pred HHHHhcCCCCcEEeccccCCHHHHH-HHHHcCcCEEEEeccC-----CChH-HHHHHHHHHHHcCCcEEE-EcCCHHHHH
Q 015899 231 EAVRSAGVKCPLLCKEFIVDAWQIY-YARTKGADAVLLIAAV-----LPDL-DIRYMTKICKLLGLTALV-EVHDEREMD 302 (398)
Q Consensus 231 ~~Ir~a~v~lPVL~KDFIid~~QI~-eAr~~GADaVLLiaai-----L~~~-~L~~Li~~a~~LGL~~LV-EVht~eEl~ 302 (398)
+.+++. .+|++.+=..-+..+.. .+..+|+|++.+...- ..+. ....+....+..++.+++ -+.|.+++.
T Consensus 149 ~~~~~~--g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~ggi~t~e~a~ 226 (393)
T 2qr6_A 149 AQVRDS--GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPVIAGGVNDYTTAL 226 (393)
T ss_dssp HHHHHT--TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCEEEECCCSHHHHH
T ss_pred HHHhhc--CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCCEEECCcCCHHHHH
Confidence 344543 55655432222333333 3346799998775322 1111 233444555567898887 688999999
Q ss_pred HHhccCCCcEEeecc-----ccCccccc-ChhhHHHHhhhhcc--cccccC-CceEEEecCCCCHHHHHHHHHcCCCEEE
Q 015899 303 RVLGIEGIELIGINN-----RNLETFEV-DNSNTKKLLEGERG--EIIRQK-NIIVVGESGLFTPDDIAYVQEAGVKAVL 373 (398)
Q Consensus 303 rAl~l~Ga~iIGINn-----RdL~tf~v-Dl~~t~~L~~~i~~--~~i~~~-~v~vVAESGI~t~eD~~~l~~~GadaVL 373 (398)
++.++ |++.|-+.+ |.+....+ .+....++.+..+. ..+ .. ++++|+.|||.+++|+.++..+||++|.
T Consensus 227 ~~~~~-Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~-~~~~ipvia~GGI~~~~dv~kalalGA~~V~ 304 (393)
T 2qr6_A 227 HMMRT-GAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDET-GGRYVHIIADGSIENSGDVVKAIACGADAVV 304 (393)
T ss_dssp HHHTT-TCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHH-TSCCCEEEECSSCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHc-CCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhc-CCcceEEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 99997 999888854 11112111 12222222221000 001 11 2899999999999999999999999999
Q ss_pred EcccccCCCC
Q 015899 374 VGESIVKQDD 383 (398)
Q Consensus 374 VGeaLmk~~d 383 (398)
||++++....
T Consensus 305 iG~~~l~~~e 314 (393)
T 2qr6_A 305 LGSPLARAEE 314 (393)
T ss_dssp ECGGGGGSTT
T ss_pred ECHHHHcCCC
Confidence 9999866543
No 100
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.21 E-value=2.9e-05 Score=69.41 Aligned_cols=181 Identities=12% Similarity=0.050 Sum_probs=99.7
Q ss_pred HHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhc--CCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHH
Q 015899 201 EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (398)
Q Consensus 201 ~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a--~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~ 278 (398)
+..+.+.+.+.+ +-+++-.---..+++-++.+|+. ...+|++.-.. +...+.++...|||.+++-...++..++.
T Consensus 16 ~a~~~~~~~~~d-lvl~D~~~p~~~g~~~~~~l~~~~~~~~i~vi~~~~--~~~~~~~~~~~Ga~~~l~kp~~~~~~~l~ 92 (237)
T 3cwo_X 16 EAVEKYKELKPD-IVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG--QQAMVIEAIKAGAKDFIVNTAAVENPSLI 92 (237)
T ss_dssp TTHHHHHHHCCS-CEEEECCSTTSSHHHHHHHHHHHSSSCCEEEECCSS--THHHHHHHHHTTCCEEEESHHHHHCTHHH
T ss_pred HHHHHHHhcCCC-EEEEeCCCCCCCHHHHHHHHHHhCCCCCEEEEECCC--CHHHHHHHHHCCHHheEeCCcccChHHHH
Confidence 334445555666 43433222223447777887753 13466664221 26678889999999988643212222222
Q ss_pred HHHHHHHHcCCc-EEEEc---------------------CCHHHH-HHHhccCCCcEEeecc--ccCcccccChhhHHHH
Q 015899 279 YMTKICKLLGLT-ALVEV---------------------HDEREM-DRVLGIEGIELIGINN--RNLETFEVDNSNTKKL 333 (398)
Q Consensus 279 ~Li~~a~~LGL~-~LVEV---------------------ht~eEl-~rAl~l~Ga~iIGINn--RdL~tf~vDl~~t~~L 333 (398)
..+ .+.++.. .++.+ .+..+. .++... ++.-+=++. ++-+.-..+.+...++
T Consensus 93 ~~i--~~~~~~~~~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~~~~-~~~~vli~~~~~~g~~~g~~~~~i~~~ 169 (237)
T 3cwo_X 93 TQI--AQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKR-GAGEILLTSIDRDGTKSGYDTEMIRFV 169 (237)
T ss_dssp HHH--HHHHTGGGEEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHHHHH-TCSEEEEEETTTTTCCSCCCHHHHHHH
T ss_pred HHH--HHHhCCCceEEEeeecccCCcEEEEEeCCccccccCHHHHHHHHhhc-CCCeEEEEecCCCCccccccHHHHHHH
Confidence 222 2233433 11211 133343 444443 555222222 2222223343344444
Q ss_pred hhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC-ChHHHHHhhhcCc
Q 015899 334 LEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD-DPGKGITGLFGKD 395 (398)
Q Consensus 334 ~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~-dp~~~i~~L~~~~ 395 (398)
... .+.++|+.+|+.+++++.++.+.|++++++|++++..+ ++.+..+.|....
T Consensus 170 ~~~--------~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~~~~~~~~~~~~l~~~~ 224 (237)
T 3cwo_X 170 RPL--------TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEYLKKHG 224 (237)
T ss_dssp GGG--------CCSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHTTSSCHHHHHHHHHTTT
T ss_pred HHh--------cCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHcCCCCHHHHHHHHHHCC
Confidence 332 36799999999999999999999999999999996554 6666665554433
No 101
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=98.21 E-value=5.9e-06 Score=78.52 Aligned_cols=161 Identities=13% Similarity=0.154 Sum_probs=93.7
Q ss_pred HHHHHHHHcCCcEEEEeccCCcCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChH--H-
Q 015899 201 EIARSYEKGGAACLSILTDEKYFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL--D- 276 (398)
Q Consensus 201 ~iA~aY~~~GA~aISVLTd~~~F~G-s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~--~- 276 (398)
+.++...++|+++|-|=-..+...- -.+-++.||+ .++||+- |.-++.++ ..|||++++-. ++..+ .
T Consensus 27 ~~l~~~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~--~~~Piil--~p~~~~~~----~~gaD~il~ps-lln~~~~~~ 97 (235)
T 3w01_A 27 DDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR--YPLPLVL--EISNIESV----MPGFDFYFVPT-VLNSTDVAF 97 (235)
T ss_dssp HHHHHHHTSSCSEEEECCSSCCCHHHHHHHHHHHTT--SCSCEEE--ECCCSTTC----CTTCSEEEEEE-ETTBSSGGG
T ss_pred HHHHHHHHcCCCEEEECCcCCcCHHHHHHHHHHhcC--cCCCEEE--ecCCHHHh----hcCCCEEEEcc-ccCCCCcch
Confidence 3445567899999999321111110 1233445554 6899864 32233333 45999998854 44321 2
Q ss_pred -HHHHHHHHHHcCC-----cEEEE----cC--C-------------HHHHHHHh----ccCCCcEEeeccccCcccccCh
Q 015899 277 -IRYMTKICKLLGL-----TALVE----VH--D-------------EREMDRVL----GIEGIELIGINNRNLETFEVDN 327 (398)
Q Consensus 277 -L~~Li~~a~~LGL-----~~LVE----Vh--t-------------~eEl~rAl----~l~Ga~iIGINnRdL~tf~vDl 327 (398)
.....+.+++.|+ +++-| +. + .+++.... ++-|..+|=+-.... ..+.
T Consensus 98 i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~~~vY~e~sG~---~g~~ 174 (235)
T 3w01_A 98 HNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGI---YGDV 174 (235)
T ss_dssp TTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEECTTS---CCCH
T ss_pred hhhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCCCEEEEecCCC---cCCH
Confidence 1223445778899 88775 21 2 22222211 111334443322221 2355
Q ss_pred hhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 328 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 328 ~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
+...++.+. . .+++++.++||+++++++++.+ |||+|+||+++++.
T Consensus 175 ~~v~~ir~~-----~--~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~ 220 (235)
T 3w01_A 175 SKVQAVSEH-----L--TETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKD 220 (235)
T ss_dssp HHHHHHHTT-----C--SSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHC
T ss_pred HHHHHHHHh-----c--CCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecC
Confidence 555555443 1 2679999999999999999998 99999999999994
No 102
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.20 E-value=5.9e-06 Score=78.15 Aligned_cols=160 Identities=16% Similarity=0.141 Sum_probs=96.0
Q ss_pred HHHHHHHcCCcEEEEeccCCcCCCC----HHH----HHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCC
Q 015899 202 IARSYEKGGAACLSILTDEKYFKGS----FEN----LEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 202 iA~aY~~~GA~aISVLTd~~~F~Gs----~ed----L~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (398)
..+...++|+++|-| +|| .++ ++.+|+ .++|++- |.-++-|+ ..|||++++-. +|.
T Consensus 23 ~~~~~~~~GtD~i~v-------GGs~gvt~~~~~~~v~~ik~--~~~Pvvl--fp~~~~~v----~~gaD~~l~ps-lln 86 (228)
T 3vzx_A 23 QLEILCESGTDAVII-------GGSDGVTEDNVLRMMSKVRR--FLVPCVL--EVSAIEAI----VPGFDLYFIPS-VLN 86 (228)
T ss_dssp HHHHHHTSSCSEEEE-------CCCSCCCHHHHHHHHHHHTT--SSSCEEE--ECSCGGGC----CSCCSEEEEEE-ETT
T ss_pred HHHHHHHcCCCEEEE-------CCcCCCCHHHHHHHHHHhhc--cCCCEEE--eCCCHHHc----cccCCEEEEee-ecC
Confidence 344456899999999 333 233 344454 6999874 33333333 36999998854 442
Q ss_pred h--HH--HHHHHHHHHHcCC-----cEEEE----cC--C-------------HHHHHHHhcc---CCCcEEeeccccCcc
Q 015899 274 D--LD--IRYMTKICKLLGL-----TALVE----VH--D-------------EREMDRVLGI---EGIELIGINNRNLET 322 (398)
Q Consensus 274 ~--~~--L~~Li~~a~~LGL-----~~LVE----Vh--t-------------~eEl~rAl~l---~Ga~iIGINnRdL~t 322 (398)
. .. .....+.+++.|+ +++-| ++ + .+++...... .|..+|=.....
T Consensus 87 ~~~~~~i~g~~~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~~~VYld~sG--- 163 (228)
T 3vzx_A 87 SKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEYSG--- 163 (228)
T ss_dssp BSSGGGTTHHHHHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEECTT---
T ss_pred CCCcchhhhHHHHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccCCCCHHHHHHHHHHHHHcCCCEEEecCCC---
Confidence 2 11 2233355677886 77665 21 1 1333222221 133444222211
Q ss_pred cccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHH
Q 015899 323 FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGI 388 (398)
Q Consensus 323 f~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i 388 (398)
-..|++...++.+.+ .+++++.++||+|+++++++. .|||+|+||+++++.++..+.+
T Consensus 164 ~~~~~~~i~~i~~~~-------~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~p~~~~~~ 221 (228)
T 3vzx_A 164 VLGDIEAVKKTKAVL-------ETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYEDFDRALKT 221 (228)
T ss_dssp SCCCHHHHHHHHHHC-------SSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHCHHHHHHH
T ss_pred CcCCHHHHHHHHHhc-------CCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcCHHHHHHH
Confidence 123666666665531 257899999999999999998 7999999999999975544433
No 103
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=98.16 E-value=1.6e-05 Score=79.72 Aligned_cols=168 Identities=13% Similarity=0.130 Sum_probs=100.3
Q ss_pred ceEEEEeccCCCCCCCCCCCCCHHHHHHHHH--HcCCcEEEEecc--------CCcCC-CCHHHHHHHHhcCCCCcEEec
Q 015899 177 PALIAEVKKASPSRGILREDFDPVEIARSYE--KGGAACLSILTD--------EKYFK-GSFENLEAVRSAGVKCPLLCK 245 (398)
Q Consensus 177 ~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~--~~GA~aISVLTd--------~~~F~-Gs~edL~~Ir~a~v~lPVL~K 245 (398)
..+|+-+--.. +....++..+.++.+ ++||-.|++.+- +.-|. |..++|+.+++. +++||+.|
T Consensus 120 ~~~~anlg~~q-----l~~~~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~-~~vPVivK 193 (368)
T 3vkj_A 120 IPIIANLGMPQ-----LVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKE-LSVPIIVK 193 (368)
T ss_dssp SCEEEEEEGGG-----GGTTCCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTT-CSSCEEEE
T ss_pred cceecCcCeee-----cCCCCCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHH-cCCCEEEE
Confidence 45777652211 222255666655554 456666666542 23344 678899999986 89999999
Q ss_pred --cccCCHHHHHHHHHcCcCEEEEeccCC-ChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcc
Q 015899 246 --EFIVDAWQIYYARTKGADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLET 322 (398)
Q Consensus 246 --DFIid~~QI~eAr~~GADaVLLiaaiL-~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~t 322 (398)
.+.+++.....+..+|||+|.+.-.-= +..+++..- .+.-+ .-...+-..+. + .|+ .|
T Consensus 194 ~vG~g~s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R----~~~~~-----~~~~~~~~~~~--~---~g~-----pt 254 (368)
T 3vkj_A 194 ESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIR----DIRRG-----NWKAESAKNFL--D---WGV-----PT 254 (368)
T ss_dssp CSSSCCCHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHH----HHHTT-----CTHHHHHHHTT--T---CSC-----BH
T ss_pred eCCCCCCHHHHHHHHhCCCCEEEEeCCCCCcccchhhhh----ccccc-----ccchhhccccc--c---ccc-----cH
Confidence 556899999999999999999865421 122222221 11000 00000100000 0 011 11
Q ss_pred cccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015899 323 FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 323 f~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 380 (398)
. ....++... + .++++|+.|||.++.|+.++..+|||+|.||..++.
T Consensus 255 ~----~~l~~v~~~-----~--~~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~ 301 (368)
T 3vkj_A 255 A----ASIMEVRYS-----V--PDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLK 301 (368)
T ss_dssp H----HHHHHHHHH-----S--TTCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred H----HHHHHHHHH-----c--CCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHH
Confidence 0 111222222 1 257899999999999999999999999999999884
No 104
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.16 E-value=3.5e-05 Score=74.26 Aligned_cols=148 Identities=11% Similarity=0.019 Sum_probs=90.9
Q ss_pred CCcEEeccccCCHHH----HHHHHHcCcC-EEEEecc--------CC--ChHHHHHHHHHHHH-cCCcEEEEcC---CHH
Q 015899 239 KCPLLCKEFIVDAWQ----IYYARTKGAD-AVLLIAA--------VL--PDLDIRYMTKICKL-LGLTALVEVH---DER 299 (398)
Q Consensus 239 ~lPVL~KDFIid~~Q----I~eAr~~GAD-aVLLiaa--------iL--~~~~L~~Li~~a~~-LGL~~LVEVh---t~e 299 (398)
+.|+...=+..++.+ +..+..+|+| +|-|... .+ +.+.+.++++..++ .++.+++-+. +.+
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~ 172 (311)
T 1jub_A 93 EGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDLV 172 (311)
T ss_dssp SSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCSHH
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCCCCHH
Confidence 677653322223322 2334578999 8988653 11 34456777777665 4777777543 444
Q ss_pred H----HHHHhccCCCcEEeeccccCccccc----------------------ChhhHHHHhhhhcccccccCCceEEEec
Q 015899 300 E----MDRVLGIEGIELIGINNRNLETFEV----------------------DNSNTKKLLEGERGEIIRQKNIIVVGES 353 (398)
Q Consensus 300 E----l~rAl~l~Ga~iIGINnRdL~tf~v----------------------Dl~~t~~L~~~i~~~~i~~~~v~vVAES 353 (398)
+ ++.+.+. |++.|-+.|+......+ ....+.+++..++.. + +.++++|+.|
T Consensus 173 ~~~~~a~~~~~~-G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~-~-~~~ipvi~~G 249 (311)
T 1jub_A 173 HFDIMAEILNQF-PLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTR-L-KPEIQIIGTG 249 (311)
T ss_dssp HHHHHHHHHTTS-CCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTT-S-CTTSEEEEES
T ss_pred HHHHHHHHHHHc-CCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHh-c-CCCCCEEEEC
Confidence 4 4555665 99988777663110000 011123333332211 1 2368999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEEcccccC-CCChHHHHH
Q 015899 354 GLFTPDDIAYVQEAGVKAVLVGESIVK-QDDPGKGIT 389 (398)
Q Consensus 354 GI~t~eD~~~l~~~GadaVLVGeaLmk-~~dp~~~i~ 389 (398)
||.|++|+.++..+|||+|.||++++. .++....++
T Consensus 250 GI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~~~i~ 286 (311)
T 1jub_A 250 GIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRII 286 (311)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHHHHHH
Confidence 999999999999999999999999996 776554443
No 105
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=98.15 E-value=2.8e-05 Score=78.06 Aligned_cols=170 Identities=15% Similarity=0.168 Sum_probs=99.7
Q ss_pred HHHHHHHHHcCCcEEE-----EeccCCcCCCCHHHHHHHHhcCCCCcEEecccc-CCHHHHHHHH-HcCcCEEEEeccCC
Q 015899 200 VEIARSYEKGGAACLS-----ILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFI-VDAWQIYYAR-TKGADAVLLIAAVL 272 (398)
Q Consensus 200 ~~iA~aY~~~GA~aIS-----VLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFI-id~~QI~eAr-~~GADaVLLiaaiL 272 (398)
..+|++..+.|..... .+.++.. +.+..+|.. .+.|++..=.. .+..+..++. .+|||++-+....+
T Consensus 106 ~~lA~~a~~~G~~~~vGs~~~~le~~~~-----~~~~v~r~~-P~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~~ 179 (365)
T 3sr7_A 106 EKLAQVADTCGLLFVTGSYSTALKNPDD-----TSYQVKKSR-PHLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLM 179 (365)
T ss_dssp HHHHHHHHHHTCCEEC-----------------------------CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECHH
T ss_pred HHHHHHHHHcCCCeecccccccccCccc-----cceEehhhC-CCCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEecccc
Confidence 4578889998876431 1223332 222223433 46666521111 1233444444 67999998876653
Q ss_pred ----------ChHHHHHHHHHH-HHcCCcEEEE-c---CCHHHHHHHhccCCCcEEeeccccCccc--------------
Q 015899 273 ----------PDLDIRYMTKIC-KLLGLTALVE-V---HDEREMDRVLGIEGIELIGINNRNLETF-------------- 323 (398)
Q Consensus 273 ----------~~~~L~~Li~~a-~~LGL~~LVE-V---ht~eEl~rAl~l~Ga~iIGINnRdL~tf-------------- 323 (398)
+-..+.+.++.. +..++.+++- | .+.+++.++.++ |++.|-+-|+.-+.|
T Consensus 180 qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~a-Gad~I~V~g~GGt~~a~ie~~r~~~~~~~ 258 (365)
T 3sr7_A 180 QELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDL-GVKTVDISGRGGTSFAYIENRRGGNRSYL 258 (365)
T ss_dssp HHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHH-TCCEEECCCBC--------------CGGG
T ss_pred ccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHc-CCCEEEEeCCCCcccchhhcccccccccc
Confidence 112233444443 3578999887 7 799999999997 999998877644433
Q ss_pred -ccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015899 324 -EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 324 -~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 380 (398)
...+.+...|. .++. + ..++++|+.|||.++.|+.++..+|||+|.||++++.
T Consensus 259 ~~~g~pt~~~L~-~v~~--~-~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~ 312 (365)
T 3sr7_A 259 NQWGQTTAQVLL-NAQP--L-MDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLE 312 (365)
T ss_dssp TTCSCBHHHHHH-HHGG--G-TTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred ccccccHHHHHH-HHHH--h-cCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 11122222222 2211 1 1368999999999999999999999999999999985
No 106
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=98.13 E-value=5.3e-05 Score=79.00 Aligned_cols=175 Identities=12% Similarity=0.088 Sum_probs=108.1
Q ss_pred HHHHHHHHHH--cCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEe-----ccccCCHHHHHHHHHcCcCEEEEecc-
Q 015899 199 PVEIARSYEK--GGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC-----KEFIVDAWQIYYARTKGADAVLLIAA- 270 (398)
Q Consensus 199 p~~iA~aY~~--~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~-----KDFIid~~QI~eAr~~GADaVLLiaa- 270 (398)
-..+|+++.+ .|+... + ..+-.++++.+...... ..-|... +|.-+...-+..|..+|++++.+...
T Consensus 209 e~alaraA~~~~~G~~~~--~--s~~a~~s~e~v~~~~~~-~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~ 283 (511)
T 1kbi_A 209 EKDVARGCGQGVTKVPQM--I--STLASCSPEEIIEAAPS-DKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDA 283 (511)
T ss_dssp HHHHHHHHHSSSSCCCEE--E--CTTCSSCHHHHHHTCCC-SSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSC
T ss_pred HHHHHHHHHHhCCCeeEE--e--CCcccCCHHHHHhhcCC-CCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 3489999999 886532 2 22334677776443200 1334432 33222223355667789998766543
Q ss_pred -CCC----------------------------------------hH-HHHHHHHHHH-HcCCcEEE-EcCCHHHHHHHhc
Q 015899 271 -VLP----------------------------------------DL-DIRYMTKICK-LLGLTALV-EVHDEREMDRVLG 306 (398)
Q Consensus 271 -iL~----------------------------------------~~-~L~~Li~~a~-~LGL~~LV-EVht~eEl~rAl~ 306 (398)
.+. +. .. +.++..+ ..++.+++ ++.+.+++.++.+
T Consensus 284 p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~-~~i~~lr~~~~~PvivKgv~~~e~A~~a~~ 362 (511)
T 1kbi_A 284 PSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTW-KDIEELKKKTKLPIVIKGVQRTEDVIKAAE 362 (511)
T ss_dssp SSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCH-HHHHHHHHHCSSCEEEEEECSHHHHHHHHH
T ss_pred CCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHH-HHHHHHHHHhCCcEEEEeCCCHHHHHHHHH
Confidence 211 00 12 2244444 36887776 5889999999999
Q ss_pred cCCCcEEeeccccCcccc---cChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 307 IEGIELIGINNRNLETFE---VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 307 l~Ga~iIGINnRdL~tf~---vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
+ |++.|-+.|..-+.+. .+++...++.+.++...+ ..++++|+.|||.+++|+.+++.+|||+|.||..++..
T Consensus 363 a-Gad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~-~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~~ 438 (511)
T 1kbi_A 363 I-GVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNL-KDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYA 438 (511)
T ss_dssp T-TCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTC-BTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHH
T ss_pred c-CCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhcc-CCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHH
Confidence 7 9999988765443222 223333344333211001 13689999999999999999999999999999988864
No 107
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=98.11 E-value=3.6e-05 Score=76.97 Aligned_cols=164 Identities=13% Similarity=0.162 Sum_probs=99.2
Q ss_pred HHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE--EeccccCCHHHHHHHHHcCcCEEEEeccCCChHH
Q 015899 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL--LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD 276 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV--L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~ 276 (398)
..++.+..+++|+.+|-+=.|-..++-...|++.= ..+|- -.+.+. ++.. ..-..+... -..-..++.++
T Consensus 137 ~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~----~~~p~~~~~~~~~-~~~~--~~~~~~~~~-~~~d~~~~w~~ 208 (352)
T 3sgz_A 137 NKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQ----LNLEANILKAALR-ALKE--EKPTQSVPV-LFPKASFCWND 208 (352)
T ss_dssp HHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHH----HHSCHHHHTTCC-------------------CCCTTCCHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcC----CCCCcccchhhhc-cccc--ccccchhhh-hccCCCCCHHH
Confidence 34566778889999998888887777777776532 12221 001110 0000 000001100 01112234444
Q ss_pred HHHHHHHHHHcCCcEEE-EcCCHHHHHHHhccCCCcEEeeccccCccccc---ChhhHHHHhhhhcccccccCCceEEEe
Q 015899 277 IRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGIELIGINNRNLETFEV---DNSNTKKLLEGERGEIIRQKNIIVVGE 352 (398)
Q Consensus 277 L~~Li~~a~~LGL~~LV-EVht~eEl~rAl~l~Ga~iIGINnRdL~tf~v---Dl~~t~~L~~~i~~~~i~~~~v~vVAE 352 (398)
++.+.+ ..++.+++ ++.+.+++.++.++ |++.|-+.|..-+.+.- +++...++.+. + ...+++|+.
T Consensus 209 i~~lr~---~~~~PvivK~v~~~e~A~~a~~~-GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~a-----v-~~~ipVia~ 278 (352)
T 3sgz_A 209 LSLLQS---ITRLPIILKGILTKEDAELAMKH-NVQGIVVSNHGGRQLDEVSASIDALREVVAA-----V-KGKIEVYMD 278 (352)
T ss_dssp HHHHHH---HCCSCEEEEEECSHHHHHHHHHT-TCSEEEECCGGGTSSCSSCCHHHHHHHHHHH-----H-TTSSEEEEE
T ss_pred HHHHHH---hcCCCEEEEecCcHHHHHHHHHc-CCCEEEEeCCCCCccCCCccHHHHHHHHHHH-----h-CCCCeEEEE
Confidence 444433 35777654 57899999999997 99999887765433222 23333333332 1 236899999
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015899 353 SGLFTPDDIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 353 SGI~t~eD~~~l~~~GadaVLVGeaLmk 380 (398)
|||.+.+|+.++..+||++|.||++++-
T Consensus 279 GGI~~g~Dv~kaLalGA~aV~iGr~~l~ 306 (352)
T 3sgz_A 279 GGVRTGTDVLKALALGARCIFLGRPILW 306 (352)
T ss_dssp SSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 9999999999999999999999999885
No 108
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=98.09 E-value=3.2e-05 Score=78.16 Aligned_cols=168 Identities=17% Similarity=0.190 Sum_probs=108.4
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEe-----ccccCCHHHHHHHHHcCcCEEEEecc--C-
Q 015899 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC-----KEFIVDAWQIYYARTKGADAVLLIAA--V- 271 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~-----KDFIid~~QI~eAr~~GADaVLLiaa--i- 271 (398)
..+|+++.+.|+.. ++++ +-.-+++++.... .+-|+.. +|.-+....+..|..+|++++.+.+- .
T Consensus 114 ~~laraA~~~G~~~--~~s~--~~s~~le~v~~~~---~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~ 186 (392)
T 2nzl_A 114 LATVRACQSLGTGM--MLSS--WATSSIEEVAEAG---PEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYL 186 (392)
T ss_dssp HHHHHHHHHHTCEE--EECT--TCSSCHHHHHHHC---TTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSC
T ss_pred HHHHHHHHHcCCCe--eccc--hHHHHHHHHHHhc---CCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCc
Confidence 57899999988743 3332 2224677654321 2456532 44333445577788899999887431 1
Q ss_pred ----------------C--------------------------------ChHHHHHHHHHHH-HcCCcEEE-EcCCHHHH
Q 015899 272 ----------------L--------------------------------PDLDIRYMTKICK-LLGLTALV-EVHDEREM 301 (398)
Q Consensus 272 ----------------L--------------------------------~~~~L~~Li~~a~-~LGL~~LV-EVht~eEl 301 (398)
+ ++....+.++..+ ..++.+++ ++.+.+++
T Consensus 187 g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~~e~A 266 (392)
T 2nzl_A 187 GNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDDA 266 (392)
T ss_dssp CCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEECCHHHH
T ss_pred cchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEecCCHHHH
Confidence 0 0000111233332 35778877 78999999
Q ss_pred HHHhccCCCcEEeeccccCccccc---ChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccc
Q 015899 302 DRVLGIEGIELIGINNRNLETFEV---DNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 378 (398)
Q Consensus 302 ~rAl~l~Ga~iIGINnRdL~tf~v---Dl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 378 (398)
.++.++ |++.|-+.|+.-..... +++...++.+. + ..++++|+.|||.+++|+.++..+|||+|.||.++
T Consensus 267 ~~a~~a-Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~a-----v-~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~ 339 (392)
T 2nzl_A 267 REAVKH-GLNGILVSNHGARQLDGVPATIDVLPEIVEA-----V-EGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPI 339 (392)
T ss_dssp HHHHHT-TCCEEEECCGGGTSSTTCCCHHHHHHHHHHH-----H-TTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHc-CCCEEEeCCCCCCcCCCCcChHHHHHHHHHH-----c-CCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHH
Confidence 999997 99999987665433222 23333344333 1 23589999999999999999999999999999998
Q ss_pred cCC
Q 015899 379 VKQ 381 (398)
Q Consensus 379 mk~ 381 (398)
+..
T Consensus 340 l~~ 342 (392)
T 2nzl_A 340 VWG 342 (392)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
No 109
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.08 E-value=0.00011 Score=70.75 Aligned_cols=157 Identities=13% Similarity=0.068 Sum_probs=96.2
Q ss_pred HHHHHhc--CCCCcEEeccccCCHHH----HHHHHHcCcC---EEEEeccC--------C--ChHHHHHHHHHHHH-cCC
Q 015899 230 LEAVRSA--GVKCPLLCKEFIVDAWQ----IYYARTKGAD---AVLLIAAV--------L--PDLDIRYMTKICKL-LGL 289 (398)
Q Consensus 230 L~~Ir~a--~v~lPVL~KDFIid~~Q----I~eAr~~GAD---aVLLiaai--------L--~~~~L~~Li~~a~~-LGL 289 (398)
++.+++. ..+.|+...=+..++.+ +..+..+|+| +|-|.... + +.+.+.++++..++ .++
T Consensus 82 ~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~ 161 (314)
T 2e6f_A 82 LKYASDLHDYSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGL 161 (314)
T ss_dssp HHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHhhcCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCC
Confidence 4455542 13678764322223332 2233467999 88886531 1 33456677776664 477
Q ss_pred cEEEEcC---CHHH----HHHHhccCC-CcEEeeccccCccccc----------------------ChhhHHHHhhhhcc
Q 015899 290 TALVEVH---DERE----MDRVLGIEG-IELIGINNRNLETFEV----------------------DNSNTKKLLEGERG 339 (398)
Q Consensus 290 ~~LVEVh---t~eE----l~rAl~l~G-a~iIGINnRdL~tf~v----------------------Dl~~t~~L~~~i~~ 339 (398)
.++|-+. +.++ ++.+.++ | ++.|-+.|+......+ ....+.+++..++.
T Consensus 162 Pv~vK~~~~~~~~~~~~~a~~~~~a-G~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~ 240 (314)
T 2e6f_A 162 PFGVKMPPYFDIAHFDTAAAVLNEF-PLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYR 240 (314)
T ss_dssp CEEEEECCCCCHHHHHHHHHHHHTC-TTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHhc-CCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHH
Confidence 7777654 4456 5566675 8 9988777654110000 01122333333322
Q ss_pred cccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC-CCChHHHHHh
Q 015899 340 EIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK-QDDPGKGITG 390 (398)
Q Consensus 340 ~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk-~~dp~~~i~~ 390 (398)
. + .++++|+.|||.|++|+.++..+|||+|.||++++. .++....+++
T Consensus 241 ~-~--~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~~~p~~~~~i~~ 289 (314)
T 2e6f_A 241 R-C--PDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQEEGPGIFTRLED 289 (314)
T ss_dssp H-C--TTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHHHCTTHHHHHHH
T ss_pred h-c--CCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHhcCcHHHHHHHH
Confidence 1 1 268999999999999999999999999999999995 7776555543
No 110
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=98.06 E-value=1.1e-05 Score=80.99 Aligned_cols=101 Identities=24% Similarity=0.239 Sum_probs=76.6
Q ss_pred CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHh
Q 015899 226 SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVL 305 (398)
Q Consensus 226 s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl 305 (398)
+.+.++.+|+. +++||+.|. +.++..+..+..+|||+|.+... . |.
T Consensus 213 ~~~~i~~i~~~-~~~Pv~vkg-v~t~e~a~~a~~aGad~I~vs~~--g--------------g~---------------- 258 (380)
T 1p4c_A 213 NWEALRWLRDL-WPHKLLVKG-LLSAEDADRCIAEGADGVILSNH--G--------------GR---------------- 258 (380)
T ss_dssp CHHHHHHHHHH-CCSEEEEEE-ECCHHHHHHHHHTTCSEEEECCG--G--------------GT----------------
T ss_pred cHHHHHHHHHh-cCCCEEEEe-cCcHHHHHHHHHcCCCEEEEcCC--C--------------CC----------------
Confidence 47899999997 899999996 57888999999999999999310 0 00
Q ss_pred ccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 306 GIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 306 ~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
.+..-..+++...++.+.+ +.++|+.|||.+++|+.++..+||++|.||++++..
T Consensus 259 -------------~~d~~~~~~~~l~~v~~~~--------~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~ 313 (380)
T 1p4c_A 259 -------------QLDCAISPMEVLAQSVAKT--------GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYG 313 (380)
T ss_dssp -------------SCTTCCCGGGTHHHHHHHH--------CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHH
T ss_pred -------------cCCCCcCHHHHHHHHHHHc--------CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHH
Confidence 0011112344555555431 348999999999999999999999999999999864
No 111
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=98.02 E-value=8.5e-06 Score=74.61 Aligned_cols=175 Identities=11% Similarity=0.100 Sum_probs=110.7
Q ss_pred CHHHHHHHHHHcCCcEEEE-eccCCcCCCCHHHHHHHHhcCCCCcEE--e--ccccCCHH-HHHHHHHcCcCEEEEeccC
Q 015899 198 DPVEIARSYEKGGAACLSI-LTDEKYFKGSFENLEAVRSAGVKCPLL--C--KEFIVDAW-QIYYARTKGADAVLLIAAV 271 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISV-LTd~~~F~Gs~edL~~Ir~a~v~lPVL--~--KDFIid~~-QI~eAr~~GADaVLLiaai 271 (398)
+..+..+..++.|+..+++ +-++.|+.-+++.++.+|+. .+.+++ . -|.+.++. .+..+..+|||+|-+-+..
T Consensus 10 ~l~~~~~~~~~~~~~~~~~kv~~~~f~~~G~~~i~~lr~~-~~~~v~~D~kl~DI~~t~~~~v~~~~~~Gad~vtvh~~~ 88 (208)
T 2czd_A 10 EGERAIKIAKSVKDYISMIKVNWPLILGSGVDIIRRLKEE-TGVEIIADLKLADIPNTNRLIARKVFGAGADYVIVHTFV 88 (208)
T ss_dssp SHHHHHHHHHHHGGGCSEEEEEHHHHHHHCTTHHHHHHHH-HCCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTT
T ss_pred CHHHHHHHHHHhcccccEEEecHHHHHhhCHHHHHHHHHc-CCCEEEEEeeeCchHHHHHHHHHHHHhcCCCEEEEeccC
Confidence 4555556666667665543 23455655677788889875 234443 3 35555554 3667788999999886654
Q ss_pred CChHHHHHHHHHHHHc-CCcEEEEcCCHH--H---------HHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcc
Q 015899 272 LPDLDIRYMTKICKLL-GLTALVEVHDER--E---------MDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERG 339 (398)
Q Consensus 272 L~~~~L~~Li~~a~~L-GL~~LVEVht~e--E---------l~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~ 339 (398)
.... ++.+++. |+.++.++.+.. + +..+.+. |++.+-+... .++...++.+.
T Consensus 89 -g~~~----i~~~~~~~gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~-G~~G~~~~~~-------~~~~i~~lr~~--- 152 (208)
T 2czd_A 89 -GRDS----VMAVKELGEIIMVVEMSHPGALEFINPLTDRFIEVANEI-EPFGVIAPGT-------RPERIGYIRDR--- 152 (208)
T ss_dssp -CHHH----HHHHHTTSEEEEECCCCSGGGGTTTGGGHHHHHHHHHHH-CCSEEECCCS-------STHHHHHHHHH---
T ss_pred -CHHH----HHHHHHhCCcEEEEecCCcchhhHHHHHHHHHHHHHHHh-CCcEEEECCC-------ChHHHHHHHHh---
Confidence 3333 4444444 888888765532 1 2234454 6665433322 12333444433
Q ss_pred cccccCCceEEEecCCCCH-HHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 340 EIIRQKNIIVVGESGLFTP-DDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 340 ~~i~~~~v~vVAESGI~t~-eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
. +.+ +++..|||+.. .++..+.++|+|.++||++|++++||.+++++|..
T Consensus 153 --~-~~~-~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a~dp~~~~~~l~~ 203 (208)
T 2czd_A 153 --L-KEG-IKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNAPNPREAAKAIYD 203 (208)
T ss_dssp --S-CTT-CEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred --C-CCC-eEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcCCCHHHHHHHHHH
Confidence 1 223 35689999753 27889999999999999999999999999988754
No 112
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.96 E-value=6.2e-05 Score=77.98 Aligned_cols=184 Identities=11% Similarity=0.106 Sum_probs=83.8
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCC--CHHHHHHHHhcCCCCcEEecc----cc-------CCHHH-HHHHH
Q 015899 193 LREDFDPVEIARSYEKGGAACLSILTDEKYFKG--SFENLEAVRSAGVKCPLLCKE----FI-------VDAWQ-IYYAR 258 (398)
Q Consensus 193 i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~G--s~edL~~Ir~a~v~lPVL~KD----FI-------id~~Q-I~eAr 258 (398)
+.++.+..+.++.+.+.+...+-|+.+.+-+.| +..||..... -|.-.+| +. -+.++ +....
T Consensus 176 v~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~----~~~~~~d~~~~l~v~a~v~~~~~~e~~~~l~ 251 (503)
T 1me8_A 176 AHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQV----CHNELVDSQKRYLVGAGINTRDFRERVPALV 251 (503)
T ss_dssp --------------------------------------------------CCCCBCTTSCBCCEEEECSSSHHHHHHHHH
T ss_pred EcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhh----cccchhccccccccccccCchhHHHHHHHHH
Confidence 455667777888888888888888877666666 3334432211 1111122 11 12233 44446
Q ss_pred HcCcCEEEEeccCCChHHHHHHHHHHHHc--C-CcEEE-EcCCHHHHHHHhccCCCcEEeecc--------ccCcccccC
Q 015899 259 TKGADAVLLIAAVLPDLDIRYMTKICKLL--G-LTALV-EVHDEREMDRVLGIEGIELIGINN--------RNLETFEVD 326 (398)
Q Consensus 259 ~~GADaVLLiaaiL~~~~L~~Li~~a~~L--G-L~~LV-EVht~eEl~rAl~l~Ga~iIGINn--------RdL~tf~vD 326 (398)
..|++.+.+..+--......+.++..++. + +.+++ .+.+.++++.+.++ |++.|-+++ |.+..+.+.
T Consensus 252 e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~a-Gad~I~Vg~~~g~~~~~r~~~~~g~p 330 (503)
T 1me8_A 252 EAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADA-GADFIKIGIGGGSICITREQKGIGRG 330 (503)
T ss_dssp HHTCSEEEECCSCCCSHHHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHH-TCSEEEECSSCSTTCCSTTTTCCCCC
T ss_pred hhhccceEEecccCcccchhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHh-CCCeEEecccCCcCcccccccCCCCc
Confidence 77999887755432222233444555543 5 66664 78999999999998 999885532 333322222
Q ss_pred -hhhHHHHhhhhccc--ccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 327 -NSNTKKLLEGERGE--IIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 327 -l~~t~~L~~~i~~~--~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
+....++.+..+.- .. ..++++|+.|||.++.|+.++..+||++|.||+.|+...
T Consensus 331 ~~~~l~~v~~~~~~~~~~~-~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~~~ 388 (503)
T 1me8_A 331 QATAVIDVVAERNKYFEET-GIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFE 388 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHH-SEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBT
T ss_pred hHHHHHHHHHHHHHHhhhc-CCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhccc
Confidence 22222333221000 00 015889999999999999999999999999999997543
No 113
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.95 E-value=3.2e-05 Score=74.58 Aligned_cols=117 Identities=16% Similarity=0.236 Sum_probs=82.1
Q ss_pred HHHHHHHHcCcC--------EEEEecc---CCChHHHHHHHHHHHHc-C--CcEEEEcCCHHHHHHHhccCCCcEEeecc
Q 015899 252 WQIYYARTKGAD--------AVLLIAA---VLPDLDIRYMTKICKLL-G--LTALVEVHDEREMDRVLGIEGIELIGINN 317 (398)
Q Consensus 252 ~QI~eAr~~GAD--------aVLLiaa---iL~~~~L~~Li~~a~~L-G--L~~LVEVht~eEl~rAl~l~Ga~iIGINn 317 (398)
++-|.++.-|++ .|++-.. ...+ ..+-++.+++. + +.+.+||+|++|+..|++. |+++|++.|
T Consensus 134 ~~~~A~~~gG~~~hr~~l~d~vlik~~Hi~~~g~--~~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~a-GaD~I~ld~ 210 (273)
T 2b7n_A 134 FEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKD--LKSFLTHARKNLPFTAKIEIECESFEEAKNAMNA-GADIVMCDN 210 (273)
T ss_dssp HHHHHHHTTTCCCCCSSTTTCEEECHHHHTTCSS--HHHHHHHHGGGSCTTCCEEEEESSHHHHHHHHHH-TCSEEEEET
T ss_pred HHHHHHHhCCCcceEcCccceEEeeCCHHHHhCC--HHHHHHHHHHhCCCCceEEEEcCCHHHHHHHHHc-CCCEEEECC
Confidence 456666777865 6663211 0111 23445555553 3 5789999999999999997 999999876
Q ss_pred ccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 318 RNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 318 RdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
- +++...++.+.+++ .+ +++.+++.||| |++.+..+.++|+|++-||+.++..+
T Consensus 211 ~-------~~~~l~~~v~~l~~-~~--~~~~i~AsGGI-~~~ni~~~~~aGaD~i~vGs~i~~a~ 264 (273)
T 2b7n_A 211 L-------SVLETKEIAAYRDA-HY--PFVLLEASGNI-SLESINAYAKSGVDAISVGALIHQAT 264 (273)
T ss_dssp C-------CHHHHHHHHHHHHH-HC--TTCEEEEESSC-CTTTHHHHHTTTCSEEECTHHHHTCC
T ss_pred C-------CHHHHHHHHHHhhc-cC--CCcEEEEECCC-CHHHHHHHHHcCCcEEEEcHHhcCCC
Confidence 2 34444444443221 11 25789999999 99999999999999999999988654
No 114
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.89 E-value=3.3e-05 Score=75.48 Aligned_cols=114 Identities=15% Similarity=0.168 Sum_probs=81.2
Q ss_pred HHHHHHHHcCcC--------EEEEeccCCChHHH------HHHHHHHHH-cC--CcEEEEcCCHHHHHHHhccCCCcEEe
Q 015899 252 WQIYYARTKGAD--------AVLLIAAVLPDLDI------RYMTKICKL-LG--LTALVEVHDEREMDRVLGIEGIELIG 314 (398)
Q Consensus 252 ~QI~eAr~~GAD--------aVLLiaaiL~~~~L------~~Li~~a~~-LG--L~~LVEVht~eEl~rAl~l~Ga~iIG 314 (398)
++-|.++.-|++ .|++ .+..+ .+-++.+++ .+ +.+.+||+|++|+..|++. |+++|+
T Consensus 149 ~e~~A~~~GG~~~hr~~l~d~vli-----k~~Hi~~~g~~~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~a-GaD~I~ 222 (299)
T 2jbm_A 149 VEKYGLLVGGAASHRYDLGGLVMV-----KDNHVVAAGGVEKAVRAARQAADFALKVEVECSSLQEAVQAAEA-GADLVL 222 (299)
T ss_dssp HHHHHHHHTTCBCCCCSTTSSEEE-----CHHHHHHHTSHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHT-TCSEEE
T ss_pred HHHHHHHHCCCCceecCccceEEe-----cccHHHHcCCHHHHHHHHHHhCCcCCeEEEecCCHHHHHHHHHc-CCCEEE
Confidence 466667778988 5553 22222 233444444 33 6789999999999999997 999999
Q ss_pred eccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 315 INNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 315 INnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
+.|- +++...++.+.+.+ .. +++.+++.||| |++.+..+.++|+|++-||+.+...+
T Consensus 223 ld~~-------~~~~l~~~v~~l~~-~~--~~~~I~ASGGI-t~~ni~~~~~aGaD~i~vGs~i~~a~ 279 (299)
T 2jbm_A 223 LDNF-------KPEELHPTATVLKA-QF--PSVAVEASGGI-TLDNLPQFCGPHIDVISMGMLTQAAP 279 (299)
T ss_dssp EESC-------CHHHHHHHHHHHHH-HC--TTSEEEEESSC-CTTTHHHHCCTTCCEEECTHHHHSCC
T ss_pred ECCC-------CHHHHHHHHHHhhc-cC--CCeeEEEECCC-CHHHHHHHHHCCCCEEEEChhhcCCC
Confidence 8762 34444444443221 11 24789999999 99999999999999999999877654
No 115
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=97.87 E-value=0.00048 Score=67.13 Aligned_cols=127 Identities=14% Similarity=0.088 Sum_probs=80.9
Q ss_pred cCcCEEEEeccC--------C-ChHHHHHHHHHHHH-c---------CCcEEEEcCC---HHH----HHHHhccCCCcEE
Q 015899 260 KGADAVLLIAAV--------L-PDLDIRYMTKICKL-L---------GLTALVEVHD---ERE----MDRVLGIEGIELI 313 (398)
Q Consensus 260 ~GADaVLLiaai--------L-~~~~L~~Li~~a~~-L---------GL~~LVEVht---~eE----l~rAl~l~Ga~iI 313 (398)
.|+|+|-+.... + ....+.++++..++ . ++.++|-++. .+| ++.+.+. |++.|
T Consensus 164 ~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~-Gvd~i 242 (336)
T 1f76_A 164 AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRH-NIDGV 242 (336)
T ss_dssp GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHT-TCSEE
T ss_pred ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHc-CCcEE
Confidence 489999886531 1 12235566665554 2 7888888762 233 4566675 99999
Q ss_pred eeccccCcc--------------cc--cChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccc
Q 015899 314 GINNRNLET--------------FE--VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 377 (398)
Q Consensus 314 GINnRdL~t--------------f~--vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 377 (398)
-+.|+.... +. .+...+.+++..++.. + +.++++|+.|||.|++|+.++..+|||+|.||++
T Consensus 243 ~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~-~-~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~ 320 (336)
T 1f76_A 243 IATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLE-L-NGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSG 320 (336)
T ss_dssp EECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHH-H-TTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHH
T ss_pred EEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHH-h-CCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHH
Confidence 887763211 00 0011222333332211 1 2368999999999999999999999999999999
Q ss_pred ccC-CCChHHHHH
Q 015899 378 IVK-QDDPGKGIT 389 (398)
Q Consensus 378 Lmk-~~dp~~~i~ 389 (398)
++. .++....++
T Consensus 321 ~l~~~P~~~~~i~ 333 (336)
T 1f76_A 321 FIFKGPPLIKEIV 333 (336)
T ss_dssp HHHHCHHHHHHHH
T ss_pred HHhcCcHHHHHHH
Confidence 886 666555554
No 116
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.86 E-value=3.4e-05 Score=79.41 Aligned_cols=134 Identities=16% Similarity=0.205 Sum_probs=91.4
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHH
Q 015899 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRY 279 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~ 279 (398)
.+.+..+.+.|++++-|-|..++|.+-++.++.+++. .++||+.|+.. ++.....+. |||+|-+..-.=+. -.
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~l~~~-~~vpvi~k~v~-~~~~a~~l~--G~d~v~vg~g~g~~-~~-- 302 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQK-VDADFIVGNIA-NPKAVDDLT--FADAVKVGIGPGSI-CT-- 302 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHT-CCSEEEEEEEC-CHHHHTTCT--TSSEEEECSSCSTT-BC--
T ss_pred HHHHHHHHHhcCCceEEEecCCcEeehhhHHHHHHHH-hCCccccCCcC-CHHHHHHhh--CCCeEEEeeeeccc-ee--
Confidence 6778889999999987777677888888889999986 79999999865 554443333 99999983111010 00
Q ss_pred HHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHH
Q 015899 280 MTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPD 359 (398)
Q Consensus 280 Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~e 359 (398)
.. +. . |. |+. .+ ..+....+++.. .++++|+.|||.+..
T Consensus 303 --~r--------------------~~-~-~~---g~~--~~----~~l~~~~~~~~~--------~~vpVia~GGi~~~~ 341 (486)
T 2cu0_A 303 --TR--------------------IV-A-GV---GVP--QI----TAVAMVADRAQE--------YGLYVIADGGIRYSG 341 (486)
T ss_dssp --HH--------------------HH-T-CC---CCC--HH----HHHHHHHHHHHH--------HTCEEEEESCCCSHH
T ss_pred --ee--------------------EE-e-ec---Ccc--hH----HHHHHHHHHHHH--------cCCcEEecCCCCCHH
Confidence 00 00 1 11 111 00 012222333322 257999999999999
Q ss_pred HHHHHHHcCCCEEEEcccccCC
Q 015899 360 DIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 360 D~~~l~~~GadaVLVGeaLmk~ 381 (398)
|+.++..+||++|.+|+.++..
T Consensus 342 di~kalalGA~~v~~g~~~~~~ 363 (486)
T 2cu0_A 342 DIVKAIAAGADAVMLGNLLAGT 363 (486)
T ss_dssp HHHHHHHTTCSEEEESTTTTTB
T ss_pred HHHHHHHcCCCceeeChhhhcC
Confidence 9999999999999999999965
No 117
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=97.85 E-value=0.00018 Score=70.43 Aligned_cols=174 Identities=14% Similarity=0.179 Sum_probs=104.6
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcC---CCCHHHHHHHHhcCCCCcEEec---c--ccCCHHHHHHH-HHcCcCEEEEecc
Q 015899 200 VEIARSYEKGGAACLSILTDEKYF---KGSFENLEAVRSAGVKCPLLCK---E--FIVDAWQIYYA-RTKGADAVLLIAA 270 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F---~Gs~edL~~Ir~a~v~lPVL~K---D--FIid~~QI~eA-r~~GADaVLLiaa 270 (398)
..+|+++.+.|+.. ++++-... .+....++ +|...++.|++.. + +-.++..+.++ ...|+|++.+...
T Consensus 78 ~~la~~a~~~G~~~--~~~~~~~~le~~~~~~~~q-l~~~~~d~pv~~~~~~~q~~~~~~~~~~~a~~~~~~~a~~i~~n 154 (332)
T 1vcf_A 78 LALAEAAEALGVGM--MLGSGRILLERPEALRSFR-VRKVAPKALLIANLGLAQLRRYGRDDLLRLVEMLEADALAFHVN 154 (332)
T ss_dssp HHHHHHHHHHTCEE--EEEECHHHHHCTTTHHHHC-CTTTCSSSCEEEEEEGGGGGTCCHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHHcCCCE--EeCCchhcccCCCccceEE-eeccCCCceeecccChhhhhccChHHHHHHHhhcCCCceeeccc
Confidence 47888999988532 22221000 02222222 3443368898721 1 22455555554 4558998755432
Q ss_pred C-----CC-hHH---HHHHHHHHHHcCCcEEEE-c---CCHHHHHHHhccCCCcEEeeccccCcc---------------
Q 015899 271 V-----LP-DLD---IRYMTKICKLLGLTALVE-V---HDEREMDRVLGIEGIELIGINNRNLET--------------- 322 (398)
Q Consensus 271 i-----L~-~~~---L~~Li~~a~~LGL~~LVE-V---ht~eEl~rAl~l~Ga~iIGINnRdL~t--------------- 322 (398)
. .+ +.+ +.+.++..++.++.+++- + .+.+++.++.++ |++.|-+.|..-++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~i~~vr~~~~Pv~vK~v~~g~~~e~a~~~~~~-G~d~I~vs~~ggt~~~~~~~~r~~~~~~~ 233 (332)
T 1vcf_A 155 PLQEAVQRGDTDFRGLVERLAELLPLPFPVMVKEVGHGLSREAALALRDL-PLAAVDVAGAGGTSWARVEEWVRFGEVRH 233 (332)
T ss_dssp HHHHHHTTSCCCCTTHHHHHHHHCSCSSCEEEECSSSCCCHHHHHHHTTS-CCSEEECCCBTSCCHHHHHHTC-------
T ss_pred hHHHHhcCCCccHHHHHHHHHHHHcCCCCEEEEecCCCCCHHHHHHHHHc-CCCEEEeCCCCCCcchhHHHhhccccchh
Confidence 1 01 111 344555544478899998 8 899999999997 99999776543321
Q ss_pred ---cccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 323 ---FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 323 ---f~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
...-+.+ .+++..+.. .+ .++++|+.|||.+++|+.++..+|||+|.||++++..
T Consensus 234 ~~~~~~g~~~-~~~l~~v~~-~~--~~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~ 291 (332)
T 1vcf_A 234 PELCEIGIPT-ARAILEVRE-VL--PHLPLVASGGVYTGTDGAKALALGADLLAVARPLLRP 291 (332)
T ss_dssp -CCTTCSCBH-HHHHHHHHH-HC--SSSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHH
T ss_pred hhHhhccccH-HHHHHHHHH-hc--CCCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHH
Confidence 1111112 222222211 11 2589999999999999999999999999999999953
No 118
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=97.82 E-value=0.0008 Score=62.65 Aligned_cols=161 Identities=16% Similarity=0.130 Sum_probs=95.0
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCC-CCcEEec-ccc--C-----CHHHHHHHHHcCcCEEE
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCK-EFI--V-----DAWQIYYARTKGADAVL 266 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v-~lPVL~K-DFI--i-----d~~QI~eAr~~GADaVL 266 (398)
+.++..+++...+.|+.++.|. +..+..+++. . ++++... +|- . ...++.+|...|||.|-
T Consensus 19 ~~~i~~l~~~a~~~g~~~v~v~---------~~~v~~~~~~-l~~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~Id 88 (225)
T 1mzh_A 19 EKEIEEFVLKSEELGIYAVCVN---------PYHVKLASSI-AKKVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQELD 88 (225)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEC---------GGGHHHHHHH-CSSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHhCCeEEEEC---------HHHHHHHHHH-hcCCceeeEecCCCCccchhhhHHHHHHHHHcCCCEEE
Confidence 4455666666668999988873 3345555443 2 4555422 331 1 12345678889999998
Q ss_pred E--eccCC---ChHHHHHHHHHHHH-cCCcEEEEc------CCHHH----HHHHhccCCCcEEeeccccCcccccChhhH
Q 015899 267 L--IAAVL---PDLDIRYMTKICKL-LGLTALVEV------HDERE----MDRVLGIEGIELIGINNRNLETFEVDNSNT 330 (398)
Q Consensus 267 L--iaaiL---~~~~L~~Li~~a~~-LGL~~LVEV------ht~eE----l~rAl~l~Ga~iIGINnRdL~tf~vDl~~t 330 (398)
+ ....+ ..+.+.+.++..++ .+ .+++-+ -|.++ .+.+.++ |++.|-+| ....+-..+++..
T Consensus 89 ~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~ea-Gad~I~ts-tg~~~gga~~~~i 165 (225)
T 1mzh_A 89 IVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEA-GADFIKTS-TGFAPRGTTLEEV 165 (225)
T ss_dssp EECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHH-TCSEEECC-CSCSSSCCCHHHH
T ss_pred EEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHh-CCCEEEEC-CCCCCCCCCHHHH
Confidence 4 33322 23333333444433 33 334433 34444 4455565 99999544 3332223355555
Q ss_pred HHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccc
Q 015899 331 KKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 377 (398)
Q Consensus 331 ~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 377 (398)
..+.+.+ +.++++++.|||+|++|+.++.++||+ +||.+
T Consensus 166 ~~v~~~v------~~~ipVia~GGI~t~~da~~~l~aGA~--~iG~s 204 (225)
T 1mzh_A 166 RLIKSSA------KGRIKVKASGGIRDLETAISMIEAGAD--RIGTS 204 (225)
T ss_dssp HHHHHHH------TTSSEEEEESSCCSHHHHHHHHHTTCS--EEEES
T ss_pred HHHHHHh------CCCCcEEEECCCCCHHHHHHHHHhCch--HHHHc
Confidence 5554431 236899999999999999999999999 45655
No 119
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=97.81 E-value=3.3e-05 Score=75.32 Aligned_cols=115 Identities=18% Similarity=0.183 Sum_probs=68.9
Q ss_pred HHHHHHHHcCcC--------EEEEeccCCChHHH------HHHHHHHHH-cC--CcEEEEcCCHHHHHHHhccCCCcEEe
Q 015899 252 WQIYYARTKGAD--------AVLLIAAVLPDLDI------RYMTKICKL-LG--LTALVEVHDEREMDRVLGIEGIELIG 314 (398)
Q Consensus 252 ~QI~eAr~~GAD--------aVLLiaaiL~~~~L------~~Li~~a~~-LG--L~~LVEVht~eEl~rAl~l~Ga~iIG 314 (398)
++-|.++.-|++ .|++ .+..+ .+-++.+++ .+ +.+.+||+|++|+..|++. |+++|+
T Consensus 151 ~e~~A~~~GG~~~hr~~l~d~vli-----k~nh~~~~g~i~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~a-GaD~I~ 224 (294)
T 3c2e_A 151 LEKYSMLVGGCDTHRYDLSSMVML-----KDNHIWATGSITNAVKNARAVCGFAVKIEVECLSEDEATEAIEA-GADVIM 224 (294)
T ss_dssp HHHHHHHHTTCBCCCCSTTTSEEE-----CHHHHHHHSSHHHHHHHHHHHHCTTSCEEEECSSSHHHHHHHHH-TCSEEE
T ss_pred HHHHHHHhCCCCceecCccceEEe-----ecchhhhcCCHHHHHHHHHHhcCcCCeEEEecCCHHHHHHHHHc-CCCEEE
Confidence 566677788987 5552 22222 223444443 33 6789999999999999997 999999
Q ss_pred eccccCcccccChhhHHHHhhhhccc--ccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 315 INNRNLETFEVDNSNTKKLLEGERGE--IIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 315 INnRdL~tf~vDl~~t~~L~~~i~~~--~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
+.|-++ +...++.+.+.+. .+ +++.+++.||| |++.+..+.++|+|++-||+.+...+
T Consensus 225 ld~~~~-------~~l~~~v~~l~~~~~g~--~~v~I~ASGGI-t~~ni~~~~~~GvD~i~vGs~i~~a~ 284 (294)
T 3c2e_A 225 LDNFKG-------DGLKMCAQSLKNKWNGK--KHFLLECSGGL-NLDNLEEYLCDDIDIYSTSSIHQGTP 284 (294)
T ss_dssp CCC------------------------------CCEEEEECCC-CC------CCCSCSEEECGGGTSSCC
T ss_pred ECCCCH-------HHHHHHHHHhcccccCC--CCeEEEEECCC-CHHHHHHHHHcCCCEEEEechhcCCC
Confidence 876332 3333333322110 01 23789999999 99999999999999999999987654
No 120
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.80 E-value=8e-05 Score=72.51 Aligned_cols=124 Identities=21% Similarity=0.196 Sum_probs=85.1
Q ss_pred eccc-cCCHHHHHHHHHcCcC--------EEEEeccCCCh-HHHHHHHHHHHHc---CCcEEEEcCCHHHHHHHhccCCC
Q 015899 244 CKEF-IVDAWQIYYARTKGAD--------AVLLIAAVLPD-LDIRYMTKICKLL---GLTALVEVHDEREMDRVLGIEGI 310 (398)
Q Consensus 244 ~KDF-Iid~~QI~eAr~~GAD--------aVLLiaaiL~~-~~L~~Li~~a~~L---GL~~LVEVht~eEl~rAl~l~Ga 310 (398)
||.. .+-..+-|.++.-|++ ++|+.---+.- ..+..-++.+++. .+.+-|||+|.+|++.|++. |+
T Consensus 139 RKt~Pglr~~~kyAv~~GGg~nHR~~L~d~~LIkdnHi~~aggi~~av~~ar~~~~~~~~IgVev~t~eea~eA~~a-Ga 217 (286)
T 1x1o_A 139 RKTTPGLRALEKYAVRVGGGRNHRYGLFDGILLKENHVRAAGGVGEAVRRAKARAPHYLKVEVEVRSLEELEEALEA-GA 217 (286)
T ss_dssp SCCCTTCHHHHHHHHHHHTCBCCCSSSSSCEEECHHHHHHHTSHHHHHHHHHHHSCTTSCEEEEESSHHHHHHHHHH-TC
T ss_pred CCCChhhHHHHHHHHHhCCCcccccccccceEEECCHHHHhCCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHc-CC
Confidence 5653 2333566777777765 56553221100 0134456666653 25688999999999999997 99
Q ss_pred cEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 311 ELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 311 ~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
++|++-|- +.+.+++..+.+ ...+++++.||| |++.+..+.+.|+|++-||..+...+
T Consensus 218 D~I~ld~~-------~~~~~k~av~~v------~~~ipi~AsGGI-t~eni~~~a~tGvD~IsVgs~~~~a~ 275 (286)
T 1x1o_A 218 DLILLDNF-------PLEALREAVRRV------GGRVPLEASGNM-TLERAKAAAEAGVDYVSVGALTHSAK 275 (286)
T ss_dssp SEEEEESC-------CHHHHHHHHHHH------TTSSCEEEESSC-CHHHHHHHHHHTCSEEECTHHHHSCC
T ss_pred CEEEECCC-------CHHHHHHHHHHh------CCCCeEEEEcCC-CHHHHHHHHHcCCCEEEEcHHHcCCC
Confidence 99999984 334445555432 125789999999 89999999999999999998666543
No 121
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=97.78 E-value=0.00064 Score=67.17 Aligned_cols=157 Identities=18% Similarity=0.174 Sum_probs=99.9
Q ss_pred HHHHHHHHHcCCcEEEEecc----------------CCcCCCCHHH--------HHHHHhcCCCCcEEeccccCCHHHHH
Q 015899 200 VEIARSYEKGGAACLSILTD----------------EKYFKGSFEN--------LEAVRSAGVKCPLLCKEFIVDAWQIY 255 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd----------------~~~F~Gs~ed--------L~~Ir~a~v~lPVL~KDFIid~~QI~ 255 (398)
++-|+...++|+++|=+..- ..-|+||+++ +++||++ ++.||..|=-..+ +.
T Consensus 147 ~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~-v~~pv~vRls~~~-~~-- 222 (340)
T 3gr7_A 147 QNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREV-WDGPLFVRISASD-YH-- 222 (340)
T ss_dssp HHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH-CCSCEEEEEESCC-CS--
T ss_pred HHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHh-cCCceEEEecccc-cc--
Confidence 44456667789999988632 2346888875 4556776 7899864411000 00
Q ss_pred HHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhh
Q 015899 256 YARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLE 335 (398)
Q Consensus 256 eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~ 335 (398)
-| -.+.++..++++...+.|++ +++||+-. .....+ . ..-..+++...++.+
T Consensus 223 ----~~---------g~~~~~~~~la~~L~~~Gvd-~i~vs~g~-------~~~~~~-----~--~~~~~~~~~~~~ik~ 274 (340)
T 3gr7_A 223 ----PD---------GLTAKDYVPYAKRMKEQGVD-LVDVSSGA-------IVPARM-----N--VYPGYQVPFAELIRR 274 (340)
T ss_dssp ----TT---------SCCGGGHHHHHHHHHHTTCC-EEEEECCC-------SSCCCC-----C--CCTTTTHHHHHHHHH
T ss_pred ----CC---------CCCHHHHHHHHHHHHHcCCC-EEEEecCC-------ccCCCC-----C--CCccccHHHHHHHHH
Confidence 01 12345566777777777776 44554310 000000 0 001123444555544
Q ss_pred hhcccccccCCceEEEecCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHhhhcCcC
Q 015899 336 GERGEIIRQKNIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITGLFGKDI 396 (398)
Q Consensus 336 ~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~L~~~~~ 396 (398)
. .++++++.|||.|++++.++.+.| ||+|.+|.+++..+|....+++-++.++
T Consensus 275 ~--------~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l~~~~ 328 (340)
T 3gr7_A 275 E--------ADIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAARELGAKI 328 (340)
T ss_dssp H--------TTCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTTCCC
T ss_pred H--------cCCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHCCCCC
Confidence 3 257899999999999999999999 9999999999999999888888777543
No 122
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=97.77 E-value=0.00012 Score=72.68 Aligned_cols=145 Identities=12% Similarity=0.166 Sum_probs=96.0
Q ss_pred CCcEEeccccCCHHHHHHH----HHcCcCEEEEecc--------------CC-ChHHHHHHHHHHHH-cCCcEEEEcC--
Q 015899 239 KCPLLCKEFIVDAWQIYYA----RTKGADAVLLIAA--------------VL-PDLDIRYMTKICKL-LGLTALVEVH-- 296 (398)
Q Consensus 239 ~lPVL~KDFIid~~QI~eA----r~~GADaVLLiaa--------------iL-~~~~L~~Li~~a~~-LGL~~LVEVh-- 296 (398)
+.|+...=|.-++.+..+| ..+|+|.|-|... ++ ..+.+.++++..++ .++.+.+-++
T Consensus 57 ~~p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g 136 (350)
T 3b0p_A 57 EHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLG 136 (350)
T ss_dssp GCSEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESC
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecC
Confidence 4566543334456544433 4679999999863 12 23447777776664 5777777332
Q ss_pred -----C----HHHHHHHhccCCCcEEeeccccCcc-c---------ccChhhHHHHhhhhcccccccCCceEEEecCCCC
Q 015899 297 -----D----EREMDRVLGIEGIELIGINNRNLET-F---------EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFT 357 (398)
Q Consensus 297 -----t----~eEl~rAl~l~Ga~iIGINnRdL~t-f---------~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t 357 (398)
+ .+.++.+.+. |++.|-+..|.... + ..+++...++.+. + .++++|+-|||.|
T Consensus 137 ~~~~~~~~~~~~~a~~l~~a-G~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~-----~--~~iPVianGgI~s 208 (350)
T 3b0p_A 137 LEGKETYRGLAQSVEAMAEA-GVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGD-----F--PQLTFVTNGGIRS 208 (350)
T ss_dssp BTTCCCHHHHHHHHHHHHHT-TCCEEEEECSCBC----------CCCCCHHHHHHHHHH-----C--TTSEEEEESSCCS
T ss_pred cCccccHHHHHHHHHHHHHc-CCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHh-----C--CCCeEEEECCcCC
Confidence 2 2334566665 99999888764310 1 1355555555443 1 2689999999999
Q ss_pred HHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015899 358 PDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 392 (398)
Q Consensus 358 ~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 392 (398)
++|+.++.+ |||+|.||++++..++....+.+.+
T Consensus 209 ~eda~~~l~-GaD~V~iGRa~l~~P~l~~~i~~~l 242 (350)
T 3b0p_A 209 LEEALFHLK-RVDGVMLGRAVYEDPFVLEEADRRV 242 (350)
T ss_dssp HHHHHHHHT-TSSEEEECHHHHHCGGGGTTHHHHT
T ss_pred HHHHHHHHh-CCCEEEECHHHHhCcHHHHHHHHHh
Confidence 999999998 9999999999998887766665433
No 123
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=97.75 E-value=3.8e-05 Score=74.81 Aligned_cols=94 Identities=14% Similarity=0.175 Sum_probs=73.3
Q ss_pred HHHHHHHHHHcC---CcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEec
Q 015899 277 IRYMTKICKLLG---LTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGES 353 (398)
Q Consensus 277 L~~Li~~a~~LG---L~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAES 353 (398)
+..-++.+++.. ..+.|||+|.+|++.|+++ |+++|+.-|- +++...+.++.+++. . ..+++.+.|
T Consensus 179 i~~av~~ar~~~~~~~~I~VEV~tleea~eA~~a-GaD~I~LDn~-------~~e~l~~av~~l~~~-~--~~v~ieASG 247 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVEVENLEDALRAVEA-GADIVMLDNL-------SPEEVKDISRRIKDI-N--PNVIVEVSG 247 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEESSHHHHHHHHHT-TCSEEEEESC-------CHHHHHHHHHHHHHH-C--TTSEEEEEE
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHc-CCCEEEECCC-------CHHHHHHHHHHhhcc-C--CCceEEEEC
Confidence 455677777654 6789999999999999997 9999999983 344445554443210 0 257899999
Q ss_pred CCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 354 GLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 354 GI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
|| |++.+..+.+.|+|.+-||..+...+
T Consensus 248 GI-t~eni~~~a~tGVD~IsvGslt~sa~ 275 (285)
T 1o4u_A 248 GI-TEENVSLYDFETVDVISSSRLTLQEV 275 (285)
T ss_dssp CC-CTTTGGGGCCTTCCEEEEGGGTSSCC
T ss_pred CC-CHHHHHHHHHcCCCEEEEeHHHcCCC
Confidence 99 89999999999999999999887665
No 124
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.74 E-value=7.8e-05 Score=72.88 Aligned_cols=115 Identities=18% Similarity=0.222 Sum_probs=79.8
Q ss_pred HHHHHHHHcCcC--------EEEEeccCCCh-HHHHHHHHHHHHc--CCcEEEEcCCHHHHHHHhccCCCcEEeeccccC
Q 015899 252 WQIYYARTKGAD--------AVLLIAAVLPD-LDIRYMTKICKLL--GLTALVEVHDEREMDRVLGIEGIELIGINNRNL 320 (398)
Q Consensus 252 ~QI~eAr~~GAD--------aVLLiaaiL~~-~~L~~Li~~a~~L--GL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL 320 (398)
++-|.++.-|++ +|++--.-+.- ..+.+-++.+++. ...+.|||+|++|+..++++ |+++|++-|
T Consensus 161 ~e~~Av~~GG~~~hr~~l~d~vlikdnhi~~~Gti~~ai~~~r~~~~~~kI~vev~tlee~~eA~~a-GaD~I~ld~--- 236 (296)
T 1qap_A 161 ALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVENLDELDDALKA-GADIIMLDN--- 236 (296)
T ss_dssp HHHHHHHHHTCBCCCSSSSSCEEECHHHHHHHSSHHHHHHHHHHHSTTSCEEEEESSHHHHHHHHHT-TCSEEEESS---
T ss_pred HHHHHHHHCCchhhccccccEEEEEcCCeeccCCHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHc-CCCEEEECC---
Confidence 566777778877 44421000000 0123344444442 23689999999999999997 999999976
Q ss_pred cccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 321 ETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 321 ~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
.+++...++.+.+ ...+.+.+.||| |++.+..+.+.|+|.+-||+.+...
T Consensus 237 ----~~~e~l~~~v~~~------~~~~~I~ASGGI-t~~~i~~~a~~GvD~isvGsli~~a 286 (296)
T 1qap_A 237 ----FNTDQMREAVKRV------NGQARLEVSGNV-TAETLREFAETGVDFISVGALTKHV 286 (296)
T ss_dssp ----CCHHHHHHHHHTT------CTTCCEEECCCS-CHHHHHHHHHTTCSEEECSHHHHEE
T ss_pred ----CCHHHHHHHHHHh------CCCCeEEEECCC-CHHHHHHHHHcCCCEEEEeHHHcCC
Confidence 4445555555432 235789999999 9999999999999999999866443
No 125
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=97.71 E-value=0.00033 Score=66.07 Aligned_cols=172 Identities=18% Similarity=0.252 Sum_probs=108.7
Q ss_pred HHHHHHcCCcEEEEeccCCcCCC---CHHHHHHHH---hcCCCCcEE------eccccCCHH-------HHHHHHHcCcC
Q 015899 203 ARSYEKGGAACLSILTDEKYFKG---SFENLEAVR---SAGVKCPLL------CKEFIVDAW-------QIYYARTKGAD 263 (398)
Q Consensus 203 A~aY~~~GA~aISVLTd~~~F~G---s~edL~~Ir---~a~v~lPVL------~KDFIid~~-------QI~eAr~~GAD 263 (398)
|.+.+++||+.|=..+.- .-+| |+..++.++ +. +++||. ..||..++. +|..++.+|||
T Consensus 14 a~~A~~~GAdRIELc~~L-~~GGlTPS~g~i~~~~~~~~~-~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~Gad 91 (224)
T 2bdq_A 14 LTRLDKAIISRVELCDNL-AVGGTTPSYGVIKEANQYLHE-KGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESD 91 (224)
T ss_dssp GGGCCTTTCCEEEEEBCG-GGTCBCCCHHHHHHHHHHHHH-TTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHcCCCEEEEcCCc-ccCCcCCCHHHHHHHHHhhhh-cCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCC
Confidence 456678999999987643 3344 889999998 76 899985 378998876 36688999999
Q ss_pred EEEEeccC----CChHHHHHHHHHHHHcCCcEEE-----Ec--CCHHH-HHHHhccCCCcEEeec-cccCcccccChhhH
Q 015899 264 AVLLIAAV----LPDLDIRYMTKICKLLGLTALV-----EV--HDERE-MDRVLGIEGIELIGIN-NRNLETFEVDNSNT 330 (398)
Q Consensus 264 aVLLiaai----L~~~~L~~Li~~a~~LGL~~LV-----EV--ht~eE-l~rAl~l~Ga~iIGIN-nRdL~tf~vDl~~t 330 (398)
.|.+.+=- ++.+.++.|++.|+ ||.+-. ++ .|..+ ++...++ |++=|=+. ...-++..-.++..
T Consensus 92 GvV~G~Lt~dg~iD~~~~~~Li~~a~--~~~vTFHRAFD~~~~~d~~~ale~L~~l-Gv~rILTSG~~~~~~a~~g~~~L 168 (224)
T 2bdq_A 92 ALVLGILTSNNHIDTEAIEQLLPATQ--GLPLVFHMAFDVIPKSDQKKSIDQLVAL-GFTRILLHGSSNGEPIIENIKHI 168 (224)
T ss_dssp EEEECCBCTTSSBCHHHHHHHHHHHT--TCCEEECGGGGGSCTTTHHHHHHHHHHT-TCCEEEECSCSSCCCGGGGHHHH
T ss_pred EEEEeeECCCCCcCHHHHHHHHHHhC--CCeEEEECchhccCCcCHHHHHHHHHHc-CCCEEECCCCCCCCcHHHHHHHH
Confidence 99997731 34466899998876 454421 13 44444 4555565 76533322 11111122235555
Q ss_pred HHHhhhhcccccccCCceEEEecCCCCHHHHHHHH-HcCCCEEEEcccccCCCChHH
Q 015899 331 KKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQ-EAGVKAVLVGESIVKQDDPGK 386 (398)
Q Consensus 331 ~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~-~~GadaVLVGeaLmk~~dp~~ 386 (398)
.+|.... ...+.+++.||| +++.+..+. ..|++.|=...-+.++.+|.+
T Consensus 169 ~~Lv~~a------~~ri~Im~GgGV-~~~Ni~~l~~~tGv~e~H~s~i~~~~~~~~~ 218 (224)
T 2bdq_A 169 KALVEYA------NNRIEIMVGGGV-TAENYQYICQETGVKQAHGTRITQMAGDPLE 218 (224)
T ss_dssp HHHHHHH------TTSSEEEECSSC-CTTTHHHHHHHHTCCEEEETTCC--------
T ss_pred HHHHHhh------CCCeEEEeCCCC-CHHHHHHHHHhhCCCEEccccccCCCCCcch
Confidence 6665531 235789999999 667777776 689999887666666666643
No 126
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=97.70 E-value=0.00098 Score=64.79 Aligned_cols=154 Identities=18% Similarity=0.162 Sum_probs=101.7
Q ss_pred CHHHHHHHHhcCCCCcEEeccccCCHHHHHHH----HHcCcCEEEEeccC--------------C-ChHHHHHHHHHHHH
Q 015899 226 SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA----RTKGADAVLLIAAV--------------L-PDLDIRYMTKICKL 286 (398)
Q Consensus 226 s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eA----r~~GADaVLLiaai--------------L-~~~~L~~Li~~a~~ 286 (398)
+...++.+.. ..+.|+...=+..++.+..+| ..+ +|+|-|.+.. + ....+.++++..++
T Consensus 46 ~~~~~~~l~~-~~~~~~~~QL~g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~ 123 (318)
T 1vhn_A 46 SQKTEELLPQ-PHERNVAVQIFGSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRK 123 (318)
T ss_dssp CHHHHHHSCC-TTCTTEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHH
T ss_pred CHhHHHhhhC-cCCCeEEEEeCCCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHH
Confidence 3344444422 246777654445566554443 346 9999887532 2 23346677776654
Q ss_pred -cCCcEEEEcC-------CHHHHHHHhccCCCcEEeeccccCccc---ccChhhHHHHhhhhcccccccCCceEEEecCC
Q 015899 287 -LGLTALVEVH-------DEREMDRVLGIEGIELIGINNRNLETF---EVDNSNTKKLLEGERGEIIRQKNIIVVGESGL 355 (398)
Q Consensus 287 -LGL~~LVEVh-------t~eEl~rAl~l~Ga~iIGINnRdL~tf---~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI 355 (398)
.|+.+.|-++ +.+.++.+.+. |++.|-+..|...+. ..++ +++.. +.. ++++|+.|||
T Consensus 124 ~~~~pv~vKir~G~~~~~~~~~a~~l~~~-G~d~i~v~g~~~~~~~~~~~~~----~~i~~-----i~~-~ipVi~~GgI 192 (318)
T 1vhn_A 124 SVSGKFSVKTRLGWEKNEVEEIYRILVEE-GVDEVFIHTRTVVQSFTGRAEW----KALSV-----LEK-RIPTFVSGDI 192 (318)
T ss_dssp HCSSEEEEEEESCSSSCCHHHHHHHHHHT-TCCEEEEESSCTTTTTSSCCCG----GGGGG-----SCC-SSCEEEESSC
T ss_pred hhCCCEEEEecCCCChHHHHHHHHHHHHh-CCCEEEEcCCCccccCCCCcCH----HHHHH-----HHc-CCeEEEECCc
Confidence 6777777643 12456666675 999998876643322 1233 33443 223 7899999999
Q ss_pred CCHHHHHHHHH-cCCCEEEEcccccCCCChHHHHHhhh
Q 015899 356 FTPDDIAYVQE-AGVKAVLVGESIVKQDDPGKGITGLF 392 (398)
Q Consensus 356 ~t~eD~~~l~~-~GadaVLVGeaLmk~~dp~~~i~~L~ 392 (398)
.|++|+.++.+ .|||+|.||.+++..++....+++.+
T Consensus 193 ~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~~~ 230 (318)
T 1vhn_A 193 FTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFL 230 (318)
T ss_dssp CSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHHHH
Confidence 99999999998 79999999999999999877776644
No 127
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=97.70 E-value=0.0006 Score=67.00 Aligned_cols=153 Identities=14% Similarity=0.178 Sum_probs=98.2
Q ss_pred HHHHHHHHHcCCcEEEEecc----------------CCcCCCCH--------HHHHHHHhcCCCCcEEec----cccCCH
Q 015899 200 VEIARSYEKGGAACLSILTD----------------EKYFKGSF--------ENLEAVRSAGVKCPLLCK----EFIVDA 251 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd----------------~~~F~Gs~--------edL~~Ir~a~v~lPVL~K----DFIid~ 251 (398)
++-|+.+.++|+++|=+..- ..-|+||+ +-++.||++ ++.||..| |+. +
T Consensus 147 ~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~-v~~pv~vris~~~~~-~- 223 (338)
T 1z41_A 147 KQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQV-WDGPLFVRVSASDYT-D- 223 (338)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH-CCSCEEEEEECCCCS-T-
T ss_pred HHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHH-cCCcEEEEecCcccC-C-
Confidence 55577778899999977642 12367886 445667876 68998755 221 1
Q ss_pred HHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHH
Q 015899 252 WQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTK 331 (398)
Q Consensus 252 ~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~ 331 (398)
| -++.++..++.+.....|++. ++||+.. ..+. .... .-..+++...
T Consensus 224 ---------~---------g~~~~~~~~~a~~l~~~Gvd~-i~v~~~~-------~~~~------~~~~-~~~~~~~~~~ 270 (338)
T 1z41_A 224 ---------K---------GLDIADHIGFAKWMKEQGVDL-IDCSSGA-------LVHA------DINV-FPGYQVSFAE 270 (338)
T ss_dssp ---------T---------SCCHHHHHHHHHHHHHTTCCE-EEEECCC-------SSCC------CCCC-CTTTTHHHHH
T ss_pred ---------C---------CCCHHHHHHHHHHHHHcCCCE-EEEecCc-------cccC------CCCC-CccchHHHHH
Confidence 1 133445566666666667653 3343310 0000 0000 0012344455
Q ss_pred HHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHhhhcCcC
Q 015899 332 KLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITGLFGKDI 396 (398)
Q Consensus 332 ~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~L~~~~~ 396 (398)
++.+. .++++++-|||.|++++.++.+.| ||.|.+|.+++..+|....+++-++.+|
T Consensus 271 ~ir~~--------~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~~~~~~i 328 (338)
T 1z41_A 271 KIREQ--------ADMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAAKQLNTEI 328 (338)
T ss_dssp HHHHH--------HCCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTTCCC
T ss_pred HHHHH--------CCCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHHcCCCccc
Confidence 55443 257899999999999999999999 9999999999999999888877666554
No 128
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=97.68 E-value=0.00035 Score=69.80 Aligned_cols=157 Identities=16% Similarity=0.051 Sum_probs=95.9
Q ss_pred HHHHHHhc--CCCCcEEeccccCCHHHHHHH-------HHcCcCEEEEeccC--------C--ChHHHHHHHHHHHH-cC
Q 015899 229 NLEAVRSA--GVKCPLLCKEFIVDAWQIYYA-------RTKGADAVLLIAAV--------L--PDLDIRYMTKICKL-LG 288 (398)
Q Consensus 229 dL~~Ir~a--~v~lPVL~KDFIid~~QI~eA-------r~~GADaVLLiaai--------L--~~~~L~~Li~~a~~-LG 288 (398)
+++.+++. ..+.||...=+..++.+..++ ...|+|+|-|.... | +++.+.++++..++ ..
T Consensus 114 ~~~~l~~~~~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~ 193 (354)
T 4ef8_A 114 YLAYAAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYP 193 (354)
T ss_dssp HHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhC
Confidence 44555432 146787644233334322111 13689999998762 3 34668888887765 57
Q ss_pred CcEEEEcC---CHHHHHHHh----ccCC-CcEEeecccc-------CcccccC---------------hhhHHHHhhhhc
Q 015899 289 LTALVEVH---DEREMDRVL----GIEG-IELIGINNRN-------LETFEVD---------------NSNTKKLLEGER 338 (398)
Q Consensus 289 L~~LVEVh---t~eEl~rAl----~l~G-a~iIGINnRd-------L~tf~vD---------------l~~t~~L~~~i~ 338 (398)
+.++|-+. +.+++..+. +. | ++.|-+.|+- .++-.+- .....+++..++
T Consensus 194 ~PV~vKi~p~~d~~~~~~~a~~~~~~-Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~ 272 (354)
T 4ef8_A 194 HSFGVKMPPYFDFAHFDAAAEILNEF-PKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFY 272 (354)
T ss_dssp SCEEEEECCCCSHHHHHHHHHHHHTC-TTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHH
T ss_pred CCeEEEecCCCCHHHHHHHHHHHHhC-CCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHH
Confidence 88888776 555555544 43 6 7766554431 1111100 012233333332
Q ss_pred ccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC-CChHHHHH
Q 015899 339 GEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ-DDPGKGIT 389 (398)
Q Consensus 339 ~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~-~dp~~~i~ 389 (398)
.. . .++++|+.|||.|++|+.++..+|||+|.||++++.. ++....+.
T Consensus 273 ~~-~--~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~~~i~ 321 (354)
T 4ef8_A 273 RR-C--PGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLT 321 (354)
T ss_dssp HH-C--TTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHH
T ss_pred Hh-C--CCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHHHHHH
Confidence 21 1 3689999999999999999999999999999999976 66554443
No 129
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=97.65 E-value=0.00034 Score=68.24 Aligned_cols=125 Identities=19% Similarity=0.214 Sum_probs=86.3
Q ss_pred CCCcEE--eccc-cCCHHHHHHHHHcCc--------CEEEEec---cCCChHHHHHHHHHHHHc--CCcEEEEcCCHHHH
Q 015899 238 VKCPLL--CKEF-IVDAWQIYYARTKGA--------DAVLLIA---AVLPDLDIRYMTKICKLL--GLTALVEVHDEREM 301 (398)
Q Consensus 238 v~lPVL--~KDF-Iid~~QI~eAr~~GA--------DaVLLia---aiL~~~~L~~Li~~a~~L--GL~~LVEVht~eEl 301 (398)
+++-|+ ||-+ .+-..+-|.++.-|+ |+||+-- .... .+.+.++.+++. ...+.|||+|++|+
T Consensus 134 ~~~~i~dTRKT~PglR~l~kyAV~~GGg~nHR~gL~d~vlikdNHi~~~G--~i~~Av~~ar~~~~~~~IeVEv~tl~ea 211 (287)
T 3tqv_A 134 YKTKLLDTRKTIPGFRLAQKYAVRCGGGFNHRIGLFDAYLIKENHIRSAG--GIAKAVTKAKKLDSNKVVEVEVTNLDEL 211 (287)
T ss_dssp SSCEEECCSCCCTTCHHHHHHHHHHTTCBCCCSSSSSSEEECTTTC------CHHHHHHHHHHHCTTSCEEEEESSHHHH
T ss_pred CCeEEEeecccCcchHHHHHHHHHhcCchheeccCccEEEEeHHHHHHhC--CHHHHHHHHHhhCCCCcEEEEeCCHHHH
Confidence 334444 4553 123357777787787 6777621 1122 245566666653 57889999999999
Q ss_pred HHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccccc
Q 015899 302 DRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIV 379 (398)
Q Consensus 302 ~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLm 379 (398)
+.|+++ |+++|...|- +++...+.++.+ ...+.+.+.||| |++.+..+.+.|+|.+-||....
T Consensus 212 ~eAl~a-GaD~I~LDn~-------~~~~l~~av~~~------~~~v~ieaSGGI-t~~~i~~~a~tGVD~IsvGalt~ 274 (287)
T 3tqv_A 212 NQAIAA-KADIVMLDNF-------SGEDIDIAVSIA------RGKVALEVSGNI-DRNSIVAIAKTGVDFISVGAITK 274 (287)
T ss_dssp HHHHHT-TCSEEEEESC-------CHHHHHHHHHHH------TTTCEEEEESSC-CTTTHHHHHTTTCSEEECSHHHH
T ss_pred HHHHHc-CCCEEEEcCC-------CHHHHHHHHHhh------cCCceEEEECCC-CHHHHHHHHHcCCCEEEEChhhc
Confidence 999997 9999999763 334445555432 235788899999 99999999999999999996543
No 130
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.65 E-value=0.00031 Score=69.07 Aligned_cols=126 Identities=10% Similarity=0.075 Sum_probs=94.6
Q ss_pred CHHHHHHHHHHcC--CcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEec---cCC
Q 015899 198 DPVEIARSYEKGG--AACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIA---AVL 272 (398)
Q Consensus 198 dp~~iA~aY~~~G--A~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLia---aiL 272 (398)
+..+.++.+.+.| +.+|.+.+-.+++....+.++.+|+. ++.|++.++.+.++.+...+..+|||+|.+.. +.+
T Consensus 106 ~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~-~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~ 184 (336)
T 1ypf_A 106 DEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKH-LPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVC 184 (336)
T ss_dssp HHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHH-CTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTC
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHh-CCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCcee
Confidence 3456788899999 99998754222333456788888887 76555557778899999999999999999932 222
Q ss_pred Ch--H--------HHHHHHHHHHHcCCcEEE--EcCCHHHHHHHhccCCCcEEeeccccCccccc
Q 015899 273 PD--L--------DIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFEV 325 (398)
Q Consensus 273 ~~--~--------~L~~Li~~a~~LGL~~LV--EVht~eEl~rAl~l~Ga~iIGINnRdL~tf~v 325 (398)
+. . .+..+.+.+..+++.++. -|.+..++.+++.+ ||+.+++...-+.+.+-
T Consensus 185 ~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kalal-GAdaV~iGr~~l~t~Es 248 (336)
T 1ypf_A 185 ITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSIRF-GATMVMIGSLFAGHEES 248 (336)
T ss_dssp HHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHHHT-TCSEEEESGGGTTCTTS
T ss_pred ecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHc-CCCEEEeChhhhccccC
Confidence 11 1 456666666677999999 89999999999998 99999999777765443
No 131
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=97.61 E-value=0.0013 Score=63.20 Aligned_cols=162 Identities=16% Similarity=0.180 Sum_probs=109.9
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcCCC---CHHHHHHHHhcCCCCcEE------eccccCCHH-------HHHHHHHcCcC
Q 015899 200 VEIARSYEKGGAACLSILTDEKYFKG---SFENLEAVRSAGVKCPLL------CKEFIVDAW-------QIYYARTKGAD 263 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F~G---s~edL~~Ir~a~v~lPVL------~KDFIid~~-------QI~eAr~~GAD 263 (398)
.+-|.+.+++||+.|=..+.- .-+| |+..++.+++. +++||. ..||..++. +|..++.+|||
T Consensus 11 ~~~a~~A~~~GAdRIELc~~L-~~GGlTPS~g~i~~~~~~-~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~Gad 88 (256)
T 1twd_A 11 MECALTAQQNGADRVELCAAP-KEGGLTPSLGVLKSVRQR-VTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFP 88 (256)
T ss_dssp HHHHHHHHHTTCSEEEECBCG-GGTCBCCCHHHHHHHHHH-CCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCEEEEcCCc-ccCCCCCCHHHHHHHHHH-cCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCC
Confidence 356788899999999987643 3344 88999999987 899985 378999876 36688999999
Q ss_pred EEEEeccC----CChHHHHHHHHHHHHcCCcEEE-----EcCCHHH-HHHHhccCCCcEEeeccccCcccccChhhHHHH
Q 015899 264 AVLLIAAV----LPDLDIRYMTKICKLLGLTALV-----EVHDERE-MDRVLGIEGIELIGINNRNLETFEVDNSNTKKL 333 (398)
Q Consensus 264 aVLLiaai----L~~~~L~~Li~~a~~LGL~~LV-----EVht~eE-l~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L 333 (398)
.|.+++-- ++-+.++.|++.|+ ||.+-. ++.|..+ ++...++ |++=|=+..- -.+-.-.++...+|
T Consensus 89 GvV~G~Lt~dg~iD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~ale~L~~l-G~~rILTSG~-~~~a~~g~~~L~~L 164 (256)
T 1twd_A 89 GLVTGVLDVDGNVDMPRMEKIMAAAG--PLAVTFHRAFDMCANPLYTLNNLAEL-GIARVLTSGQ-KSDALQGLSKIMEL 164 (256)
T ss_dssp EEEECCBCTTSSBCHHHHHHHHHHHT--TSEEEECGGGGGCSCHHHHHHHHHHH-TCCEEEECTT-SSSTTTTHHHHHHH
T ss_pred EEEEeeECCCCCcCHHHHHHHHHHhC--CCcEEEECchhccCCHHHHHHHHHHc-CCCEEECCCC-CCCHHHHHHHHHHH
Confidence 99998732 34456888998776 554321 2355555 4455565 6653322211 11222235556666
Q ss_pred hhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 015899 334 LEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVG 375 (398)
Q Consensus 334 ~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVG 375 (398)
... .. .+.+++.||| +++.+..+...|++.|=.+
T Consensus 165 v~~------a~-~i~Im~GgGv-~~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 165 IAH------RD-APIIMAGAGV-RAENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp HTS------SS-CCEEEEESSC-CTTTHHHHHHHTCSEEEEC
T ss_pred HHh------hC-CcEEEecCCc-CHHHHHHHHHcCCCeEeEC
Confidence 553 12 5789999999 6777888778999988755
No 132
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=97.61 E-value=0.00048 Score=67.21 Aligned_cols=158 Identities=16% Similarity=0.133 Sum_probs=98.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhc--CCCCcEEe-cccc--CCH-----HHHHHHHHcCcCEEE
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLC-KEFI--VDA-----WQIYYARTKGADAVL 266 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a--~v~lPVL~-KDFI--id~-----~QI~eAr~~GADaVL 266 (398)
.++.++++...++|+.++.| ++.++..+++. +.+++|-. -+|= -++ +++.+|...|||.|-
T Consensus 74 ~dI~~lc~eA~~~g~aaVCV---------~P~~V~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEID 144 (288)
T 3oa3_A 74 SQIDVLCAEAKEYGFATVCV---------RPDYVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELD 144 (288)
T ss_dssp HHHHHHHHHHHHHTCSEEEE---------CGGGHHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHhcCCcEEEE---------CHHHHHHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEE
Confidence 35556677777889999988 34466666553 13555531 3341 111 367788999999998
Q ss_pred Eecc--CC-Ch--H----HHHHHHHHHHHcCCcEEEEcC--CHHHH----HHHhccCCCcEEeeccccCccccc---Chh
Q 015899 267 LIAA--VL-PD--L----DIRYMTKICKLLGLTALVEVH--DEREM----DRVLGIEGIELIGINNRNLETFEV---DNS 328 (398)
Q Consensus 267 Liaa--iL-~~--~----~L~~Li~~a~~LGL~~LVEVh--t~eEl----~rAl~l~Ga~iIGINnRdL~tf~v---Dl~ 328 (398)
+..- .+ +. + ++..+.+.|+...|.+++|.. +.+|+ +.+.++ |+++|-++ ..+.+-.. |+.
T Consensus 145 mVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~ea-GADfVKTS-TGf~~~GAT~edv~ 222 (288)
T 3oa3_A 145 MVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLA-GADYVKTS-TGFNGPGASIENVS 222 (288)
T ss_dssp EECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHT-TCSEEECC-CSSSSCCCCHHHHH
T ss_pred EEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHc-CCCEEEcC-CCCCCCCCCHHHHH
Confidence 5433 22 21 2 233344444333488899974 77884 444565 99999887 33332222 333
Q ss_pred hHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCE
Q 015899 329 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKA 371 (398)
Q Consensus 329 ~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gada 371 (398)
...+.++. ....+.+.+.|||+|.+|+..+.++||+.
T Consensus 223 lmr~~v~~------~g~~v~VKAAGGIrt~edAl~mi~aGA~R 259 (288)
T 3oa3_A 223 LMSAVCDS------LQSETRVKASGGIRTIEDCVKMVRAGAER 259 (288)
T ss_dssp HHHHHHHH------SSSCCEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHH------hCCCceEEEeCCCCCHHHHHHHHHcCCce
Confidence 33333321 02468899999999999999999999995
No 133
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.61 E-value=0.00044 Score=71.69 Aligned_cols=126 Identities=13% Similarity=0.164 Sum_probs=98.0
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEe------
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLI------ 268 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLi------ 268 (398)
..+..+.|+++.++||++|.+-+-...+.+-.+.++.+|+. . ++||+.+. +.+..+...+..+|||+|.+.
T Consensus 229 ~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~-~p~~~Vi~g~-v~t~e~a~~l~~aGaD~I~Vg~g~Gs~ 306 (496)
T 4fxs_A 229 APGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA-YPHLEIIGGN-VATAEGARALIEAGVSAVKVGIGPGSI 306 (496)
T ss_dssp SSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH-CTTCCEEEEE-ECSHHHHHHHHHHTCSEEEECSSCCTT
T ss_pred ccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHH-CCCceEEEcc-cCcHHHHHHHHHhCCCEEEECCCCCcC
Confidence 34668889999999999999988776666667889999986 5 89998854 578888889999999999974
Q ss_pred ccC-------CCh-HHHHHHHHHHHHcCCcEEE--EcCCHHHHHHHhccCCCcEEeeccccCcccc
Q 015899 269 AAV-------LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFE 324 (398)
Q Consensus 269 aai-------L~~-~~L~~Li~~a~~LGL~~LV--EVht~eEl~rAl~l~Ga~iIGINnRdL~tf~ 324 (398)
+.. .+. ..+.++.+.++..++.++. -+.+.+++.+++.+ ||+.+.+...=+.|.+
T Consensus 307 ~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~-GAd~V~iGs~f~~t~E 371 (496)
T 4fxs_A 307 CTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAA-GASCVMVGSMFAGTEE 371 (496)
T ss_dssp BCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTBTT
T ss_pred cccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHc-CCCeEEecHHHhcCCC
Confidence 111 122 2256666666677999999 58999999999998 9999998866554443
No 134
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=97.56 E-value=0.00028 Score=68.56 Aligned_cols=94 Identities=21% Similarity=0.221 Sum_probs=70.5
Q ss_pred HHHHHHHHHHcC--CcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecC
Q 015899 277 IRYMTKICKLLG--LTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESG 354 (398)
Q Consensus 277 L~~Li~~a~~LG--L~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESG 354 (398)
+...++.+++.. ..+.|||+|.+|++.|+++ |+++|..-|. +++...+.++.+++. ...+.+.+.||
T Consensus 181 i~~av~~ar~~~~~~~I~Vev~t~eea~eal~a-GaD~I~LDn~-------~~~~~~~~v~~l~~~---~~~v~ieaSGG 249 (284)
T 1qpo_A 181 VVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPE-KPELILLDNF-------AVWQTQTAVQRRDSR---APTVMLESSGG 249 (284)
T ss_dssp HHHHHHHHHHHCTTSCEEEEESSHHHHHHHGGG-CCSEEEEETC-------CHHHHHHHHHHHHHH---CTTCEEEEESS
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHc-CCCEEEECCC-------CHHHHHHHHHHhhcc---CCCeEEEEECC
Confidence 445556666542 3789999999999999997 9999999873 334444444443211 12578899999
Q ss_pred CCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 355 LFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 355 I~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
| |++.+..+.+.|+|.+.||..+...+
T Consensus 250 I-t~~~i~~~a~tGVD~isvG~l~~~a~ 276 (284)
T 1qpo_A 250 L-SLQTAATYAETGVDYLAVGALTHSVR 276 (284)
T ss_dssp C-CTTTHHHHHHTTCSEEECGGGTSSBC
T ss_pred C-CHHHHHHHHhcCCCEEEECHHHcCCC
Confidence 9 89999999999999999999776654
No 135
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=97.53 E-value=0.00056 Score=81.53 Aligned_cols=171 Identities=13% Similarity=0.142 Sum_probs=112.4
Q ss_pred HHHHHHHHHHcCCcEEEEeccCCcCCCCHHH----HHHHHhcCC--CCcEEeccccCCHH-------HHHHHHHcCcCE-
Q 015899 199 PVEIARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGV--KCPLLCKEFIVDAW-------QIYYARTKGADA- 264 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVLTd~~~F~Gs~ed----L~~Ir~a~v--~lPVL~KDFIid~~-------QI~eAr~~GADa- 264 (398)
-.++|.+..++|. +-+++--+++ +.+. ++.+|+. . +.|+-+.=+..+++ .+..++..|++.
T Consensus 596 ~~~LaaAva~aGg--lG~i~g~g~~--~~e~l~~~i~~vk~~-~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~ 670 (2060)
T 2uva_G 596 PWDFVAATMNAGY--HIELAGGGYY--NAQKMSDAISKIEKA-IPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIE 670 (2060)
T ss_dssp SHHHHHHHHHTTC--EECEEGGGCC--SHHHHHHHHHHHGGG-SCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEE
T ss_pred cHHHHHHHHHCCC--EEEECcCCCC--CHHHHHHHHHHHHhh-cccCCCeEecccccCcccchhHHHHHHHHHHcCCCcc
Confidence 3567877777664 4444222222 4444 4455654 5 57776554444444 366778899999
Q ss_pred -EEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHH----hccCCCcEEe---ecccc---CcccccCh-hhHHH
Q 015899 265 -VLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRV----LGIEGIELIG---INNRN---LETFEVDN-SNTKK 332 (398)
Q Consensus 265 -VLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rA----l~l~Ga~iIG---INnRd---L~tf~vDl-~~t~~ 332 (398)
|...+-+-+ .+++.++.+.+|+.++.-|.+..+..++ .++ |++.|- +...+ -..+ .|+ ..+..
T Consensus 671 gv~~~~G~p~---~e~~~~~l~~~gi~~i~~v~~~~~a~~~v~~l~~a-G~D~iV~~q~~G~eaGGH~g~-~d~~~~~l~ 745 (2060)
T 2uva_G 671 GLTIGAGVPS---IEVANEYIQTLGIRHISFKPGSVDAIQQVINIAKA-NPTFPIILQWTGGRGGGHHSF-EDFHQPILL 745 (2060)
T ss_dssp EEEEESSCCC---HHHHHHHHHHSCCSEEEECCCSHHHHHHHHHHHHH-CTTSCEEEEECCTTSSSSCCS-CCSHHHHHH
T ss_pred eEeecCCCCC---HHHHHHHHHHcCCeEEEecCCHHHHHHHHHHHHHc-CCCEEEEeeeEcccCCCCCCc-ccccchHHH
Confidence 666554433 3456667778899999999999988877 776 888554 22111 1111 121 23345
Q ss_pred HhhhhcccccccCCceEEEecCCCCHHHHHHHH-----------HcCCCEEEEcccccCCCC
Q 015899 333 LLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQ-----------EAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 333 L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~-----------~~GadaVLVGeaLmk~~d 383 (398)
+++.++. ..++++|+.|||.+.+|+..+. .+|||||.||+.+|-...
T Consensus 746 lv~~i~~----~~~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~E 803 (2060)
T 2uva_G 746 MYSRIRK----CSNIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKE 803 (2060)
T ss_dssp HHHHHHT----STTEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTT
T ss_pred HHHHHHH----HcCCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcC
Confidence 5555432 1368999999999999999999 999999999999997653
No 136
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.52 E-value=0.00059 Score=70.62 Aligned_cols=125 Identities=16% Similarity=0.137 Sum_probs=96.8
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEe------
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLI------ 268 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLi------ 268 (398)
..+..+.|+++.++||++|.+-+-..+..+..+.++.+|+. . ++||+.++ +.+..+...+..+|||+|.+.
T Consensus 227 ~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~-~p~~~Vi~g~-v~t~e~a~~l~~aGaD~I~vg~g~Gs~ 304 (490)
T 4avf_A 227 GADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQT-FPDVQVIGGN-IATAEAAKALAEAGADAVKVGIGPGSI 304 (490)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHH-CTTSEEEEEE-ECSHHHHHHHHHTTCSEEEECSSCSTT
T ss_pred ccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHH-CCCceEEEee-eCcHHHHHHHHHcCCCEEEECCCCCcC
Confidence 34778999999999999999988776666667899999986 5 78999865 578888999999999999983
Q ss_pred ccC-------CCh-HHHHHHHHHHHHcCCcEEE--EcCCHHHHHHHhccCCCcEEeeccccCccc
Q 015899 269 AAV-------LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETF 323 (398)
Q Consensus 269 aai-------L~~-~~L~~Li~~a~~LGL~~LV--EVht~eEl~rAl~l~Ga~iIGINnRdL~tf 323 (398)
+.- .+. ..+.++.+.++..++.++. -+.+.+++.+++.+ ||+.+.+...=+.+.
T Consensus 305 ~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~-GAd~V~vGs~~~~~~ 368 (490)
T 4avf_A 305 CTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVA-GAYCVMMGSMFAGTE 368 (490)
T ss_dssp CHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHH-TCSEEEECTTTTTBT
T ss_pred CCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHc-CCCeeeecHHHhcCC
Confidence 110 122 1245555555567999999 58999999999998 999999986554443
No 137
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=97.50 E-value=0.00047 Score=69.05 Aligned_cols=127 Identities=13% Similarity=0.108 Sum_probs=81.4
Q ss_pred HcCcCEEEEeccC--------C-ChHHHHHHHHHHHH--------cCCcEEEEcC---CHHH----HHHHhccCCCcEEe
Q 015899 259 TKGADAVLLIAAV--------L-PDLDIRYMTKICKL--------LGLTALVEVH---DERE----MDRVLGIEGIELIG 314 (398)
Q Consensus 259 ~~GADaVLLiaai--------L-~~~~L~~Li~~a~~--------LGL~~LVEVh---t~eE----l~rAl~l~Ga~iIG 314 (398)
.-+||+|-|..+. | +++.+.++++..++ ....++|-+. +.++ ++.+.+. |++.|-
T Consensus 174 ~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~a-Gadgi~ 252 (367)
T 3zwt_A 174 GPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKEL-GIDGLI 252 (367)
T ss_dssp GGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHH-TCCEEE
T ss_pred hhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHc-CCCEEE
Confidence 3458999998763 2 34557777776543 4677888776 3323 3444554 999887
Q ss_pred eccccCccc--------------c--cChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccc
Q 015899 315 INNRNLETF--------------E--VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 378 (398)
Q Consensus 315 INnRdL~tf--------------~--vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 378 (398)
+.|+..... + .....+.+++..++.. + +.++++|+.|||.|++|+.++..+|||+|.||+++
T Consensus 253 v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~-v-~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~ 330 (367)
T 3zwt_A 253 VTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYAL-T-QGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTAL 330 (367)
T ss_dssp ECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHH-T-TTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred EeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHH-c-CCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 776643210 0 0112223333332211 1 23689999999999999999999999999999999
Q ss_pred c-CCCChHHHH
Q 015899 379 V-KQDDPGKGI 388 (398)
Q Consensus 379 m-k~~dp~~~i 388 (398)
+ ..++....+
T Consensus 331 l~~gP~~~~~i 341 (367)
T 3zwt_A 331 TFWGPPVVGKV 341 (367)
T ss_dssp HHHCTHHHHHH
T ss_pred HhcCcHHHHHH
Confidence 5 555544333
No 138
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=97.50 E-value=0.00069 Score=66.40 Aligned_cols=125 Identities=18% Similarity=0.234 Sum_probs=82.2
Q ss_pred CCcEE--ecccc-CCHHHHHHHHHcCcC--------EEEE----eccCCChHHHHHHHHHHHHc--CCcEEEEcCCHHHH
Q 015899 239 KCPLL--CKEFI-VDAWQIYYARTKGAD--------AVLL----IAAVLPDLDIRYMTKICKLL--GLTALVEVHDEREM 301 (398)
Q Consensus 239 ~lPVL--~KDFI-id~~QI~eAr~~GAD--------aVLL----iaaiL~~~~L~~Li~~a~~L--GL~~LVEVht~eEl 301 (398)
.+-++ ||-+- +-..+-|.++.-|++ +|++ ++. .. .+.+.++.+++. +..+.|||+|++|+
T Consensus 146 ~~~i~~TRKt~Pglr~l~kyAv~~GGg~nHR~gL~d~vlikdNHi~~-~G--~i~~Av~~~r~~~p~~~ieVEvdtlde~ 222 (298)
T 3gnn_A 146 RARILDTRKTLPGLRLAQKYAVRVGGGANQRLALYAGILIKENHIAA-AG--GVGEALDAAFALNAEVPVQIEVETLDQL 222 (298)
T ss_dssp SCCEECCSCCCTTCHHHHHHHHHHTTCCCC----------------------CHHHHHHHHHHHC--CCCEEEESSHHHH
T ss_pred CeEEEEecCCCcchHHHHHhhHHhcCccceecCCCcEEEEeHHHHHH-cC--CHHHHHHHHHHhCCCCCEEEEeCCHHHH
Confidence 34444 45531 223577777777773 4444 111 11 244555566653 57788999999999
Q ss_pred HHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 302 DRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 302 ~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
+.|+++ |+++|-.-|-+ ++...+.++.+ ...+.+.+.||| |++.+..+.+.|+|.+-||......
T Consensus 223 ~eAl~a-GaD~I~LDn~~-------~~~l~~av~~i------~~~v~ieaSGGI-~~~~i~~~a~tGVD~isvG~lt~sa 287 (298)
T 3gnn_A 223 RTALAH-GARSVLLDNFT-------LDMMRDAVRVT------EGRAVLEVSGGV-NFDTVRAIAETGVDRISIGALTKDV 287 (298)
T ss_dssp HHHHHT-TCEEEEEESCC-------HHHHHHHHHHH------TTSEEEEEESSC-STTTHHHHHHTTCSEEECGGGGTSC
T ss_pred HHHHHc-CCCEEEECCCC-------HHHHHHHHHHh------CCCCeEEEEcCC-CHHHHHHHHHcCCCEEEECCeecCC
Confidence 999997 99999987733 34444444432 246788899999 9999999999999999999865443
No 139
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=97.49 E-value=0.0021 Score=63.90 Aligned_cols=150 Identities=12% Similarity=0.012 Sum_probs=91.3
Q ss_pred CCCcEEeccccCCHHHHHHH----HHcCcC-EEEEeccC--------C--ChHHHHHHHHHHHH-cCCcEEEEcC---CH
Q 015899 238 VKCPLLCKEFIVDAWQIYYA----RTKGAD-AVLLIAAV--------L--PDLDIRYMTKICKL-LGLTALVEVH---DE 298 (398)
Q Consensus 238 v~lPVL~KDFIid~~QI~eA----r~~GAD-aVLLiaai--------L--~~~~L~~Li~~a~~-LGL~~LVEVh---t~ 298 (398)
.+.||...=+..++.+..++ ..+|+| +|-|.... | +.+.+.++++..++ .+..++|-+. +.
T Consensus 127 ~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~~~~ 206 (345)
T 3oix_A 127 DSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPYFDI 206 (345)
T ss_dssp TCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCCH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCCCCH
Confidence 57887643333344333222 225877 89988762 3 44568888887764 4777787776 67
Q ss_pred HHHHHHhccCCC---cEEeeccc-----cCccc---------------ccChhhHHHHhhhhcccccccCCceEEEecCC
Q 015899 299 REMDRVLGIEGI---ELIGINNR-----NLETF---------------EVDNSNTKKLLEGERGEIIRQKNIIVVGESGL 355 (398)
Q Consensus 299 eEl~rAl~l~Ga---~iIGINnR-----dL~tf---------------~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI 355 (398)
+|+.++++..|+ ++|...|. ++++- ..+...+.+++..++.. + +.++++|+.|||
T Consensus 207 ~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~-~-~~~ipIIg~GGI 284 (345)
T 3oix_A 207 VHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKR-L-NPSIQIIGTGGV 284 (345)
T ss_dssp HHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTT-S-CTTSEEEEESSC
T ss_pred HHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHH-c-CCCCcEEEECCC
Confidence 776666554344 34333221 11111 11122223444433221 2 236899999999
Q ss_pred CCHHHHHHHHHcCCCEEEEccc-ccCCCChHHHHH
Q 015899 356 FTPDDIAYVQEAGVKAVLVGES-IVKQDDPGKGIT 389 (398)
Q Consensus 356 ~t~eD~~~l~~~GadaVLVGea-Lmk~~dp~~~i~ 389 (398)
.|++|+.++..+|||+|.||++ ++..++....+.
T Consensus 285 ~s~~da~~~l~aGAd~V~igra~~~~gP~~~~~i~ 319 (345)
T 3oix_A 285 XTGRDAFEHILCGASMVQIGTALHQEGPQIFKRIT 319 (345)
T ss_dssp CSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHH
T ss_pred CChHHHHHHHHhCCCEEEEChHHHhcChHHHHHHH
Confidence 9999999999999999999999 677766544443
No 140
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.47 E-value=0.001 Score=74.35 Aligned_cols=155 Identities=9% Similarity=0.041 Sum_probs=93.9
Q ss_pred HHHHHHhcCCCCcEEecc-ccCCHHH----HHHHHHcCcCEEEEeccC--------------CChHHHHHHHHHHHH-cC
Q 015899 229 NLEAVRSAGVKCPLLCKE-FIVDAWQ----IYYARTKGADAVLLIAAV--------------LPDLDIRYMTKICKL-LG 288 (398)
Q Consensus 229 dL~~Ir~a~v~lPVL~KD-FIid~~Q----I~eAr~~GADaVLLiaai--------------L~~~~L~~Li~~a~~-LG 288 (398)
++..+++..-+.|++..= +.-++.+ +..+..+|+|+|-|.... -+.+.+.++++..++ .+
T Consensus 624 ~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~ 703 (1025)
T 1gte_A 624 SVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQ 703 (1025)
T ss_dssp HHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhC
Confidence 355566541256765321 1123322 223346899999997642 123447778887775 48
Q ss_pred CcEEEEcC----CHHH-HHHHhccCCCcEEeeccccCc-------------------c----cc--cChhhHHHHhhhhc
Q 015899 289 LTALVEVH----DERE-MDRVLGIEGIELIGINNRNLE-------------------T----FE--VDNSNTKKLLEGER 338 (398)
Q Consensus 289 L~~LVEVh----t~eE-l~rAl~l~Ga~iIGINnRdL~-------------------t----f~--vDl~~t~~L~~~i~ 338 (398)
+.++|-+. +..+ ++.+.+. |++.|-+.|.-.. + +. .+...+.+++..++
T Consensus 704 ~Pv~vK~~~~~~~~~~~a~~~~~~-G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~ 782 (1025)
T 1gte_A 704 IPFFAKLTPNVTDIVSIARAAKEG-GADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIA 782 (1025)
T ss_dssp SCEEEEECSCSSCHHHHHHHHHHH-TCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHH
T ss_pred CceEEEeCCChHHHHHHHHHHHHc-CCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHH
Confidence 88877443 4444 5555665 9998888543110 0 00 11111123333322
Q ss_pred ccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC-CCChHHH
Q 015899 339 GEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK-QDDPGKG 387 (398)
Q Consensus 339 ~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk-~~dp~~~ 387 (398)
.. + .++++|+.|||.|++|+.+++.+||++|.||++++. +++....
T Consensus 783 ~~-~--~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~~~~~~~~~ 829 (1025)
T 1gte_A 783 RA-L--PGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQD 829 (1025)
T ss_dssp HH-S--TTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSCTTHHHH
T ss_pred HH-c--CCCCEEEecCcCCHHHHHHHHHcCCCEEEEeeccccCCccHHHH
Confidence 11 2 268999999999999999999999999999999997 6654443
No 141
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=97.47 E-value=0.00028 Score=86.57 Aligned_cols=174 Identities=15% Similarity=0.201 Sum_probs=110.8
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcCCCCHH----HHHHHHhcCC--CCcEEeccccCCHH----------HHHHHHHcC--
Q 015899 200 VEIARSYEKGGAACLSILTDEKYFKGSFE----NLEAVRSAGV--KCPLLCKEFIVDAW----------QIYYARTKG-- 261 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F~Gs~e----dL~~Ir~a~v--~lPVL~KDFIid~~----------QI~eAr~~G-- 261 (398)
.++|-+..++|. +-+|.--.++ +++ .|+.+|+. + +.|+=..=+...++ .+..+++.|
T Consensus 442 ~~LaaAVs~AGg--lG~l~~~g~~--~~~~l~~~i~~~r~~-~~~~~p~~vNl~~~~p~~~~~~~g~~~~~~~~~~~g~~ 516 (3089)
T 3zen_D 442 AKIVAAAANAGH--WAELAGGGQV--TEQIFNDRIAELETL-LEPGRAIQFNTLFLDPYLWKLQVGGKRLVQRARQSGAP 516 (3089)
T ss_dssp HHHHHHHHHTTC--EEEECSTTCC--SHHHHHHHHHHHHHH-SCTTCCCEEEEECSCHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHhCCC--ceeecCCCCC--CHHHHHHHHHHHHHh-cCCCCceeechhhcChhhhhhccCHHHHHHHHHHcCCC
Confidence 367777777664 4444221221 343 45556665 4 45542111123332 356778999
Q ss_pred cCEEEEeccCCChHHHHHHHHHHHHcCCcEEE-EcCCHHHHHHHhccCCCc------EEeeccccC--cccccChhhHH-
Q 015899 262 ADAVLLIAAVLPDLDIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGIE------LIGINNRNL--ETFEVDNSNTK- 331 (398)
Q Consensus 262 ADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LV-EVht~eEl~rAl~l~Ga~------iIGINnRdL--~tf~vDl~~t~- 331 (398)
+|+|.+.+-+-+.++..++++.++..|+.++. -+.+.+++.++.++ +++ +|-+..-.- +....++....
T Consensus 517 vdgv~~~aG~P~~ee~~~~i~~l~~~Gi~~i~~~~~t~~~a~~~~~i-~~d~~~~~y~vv~~G~eaGGH~g~~~~~~ll~ 595 (3089)
T 3zen_D 517 IDGLVVSAGIPDLEEAVDIIDELNEVGISHVVFKPGTVEQIRSVIRI-AAEVPTKPVIVHIEGGRAGGHHSWEDLDDLLL 595 (3089)
T ss_dssp CCEEEEESSCCCHHHHHHHHTSTTHHHHCSEEECCCSHHHHHHHHHH-HTTSTTSCEEEEECCSSSSEECCSCCHHHHHH
T ss_pred ceEEEEeCCCCchhHhHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHh-hhhcCCCcEEEEEeCCCcCCCCCcccHHHHHH
Confidence 88898866443456677888888888998877 89999999888887 776 554432111 11112322211
Q ss_pred HHhhhhcccccccCCceEEEecCCCCHHHHHHHH-----------HcCCCEEEEcccccCCCC
Q 015899 332 KLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQ-----------EAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 332 ~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~-----------~~GadaVLVGeaLmk~~d 383 (398)
.+...++. ..++++|+.|||.+++++..++ .+|||||+||+++|....
T Consensus 596 ~~~~~ir~----~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~E 654 (3089)
T 3zen_D 596 ATYSELRS----RSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATLE 654 (3089)
T ss_dssp HHHHHHTT----CTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCTT
T ss_pred HHHHHHhh----cCCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhCcc
Confidence 11133221 1478999999999999999999 999999999999998764
No 142
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.43 E-value=0.00028 Score=65.74 Aligned_cols=86 Identities=13% Similarity=0.051 Sum_probs=59.6
Q ss_pred HHHHHHhccCCCcEEeeccccC--cccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcc
Q 015899 299 REMDRVLGIEGIELIGINNRNL--ETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGE 376 (398)
Q Consensus 299 eEl~rAl~l~Ga~iIGINnRdL--~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGe 376 (398)
+-++.+.+. |++.|-+...+- .....+++...++.+. .++++++.|||.+++|+..+.++|||+|+||+
T Consensus 39 ~~a~~~~~~-G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~--------~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~ 109 (247)
T 3tdn_A 39 DWVVEVEKR-GAGEILLTSIDRDGTKSGYDTEMIRFVRPL--------TTLPIIASGGAGKMEHFLEAFLRGADKVSINT 109 (247)
T ss_dssp HHHHHHHHT-TCSEEEEEETTTTTCSSCCCHHHHHHHGGG--------CCSCEEEESCCCSHHHHHHHHHTTCSEECCSH
T ss_pred HHHHHHHHc-CCCEEEEEecCcccCCCcccHHHHHHHHHh--------CCCCEEEeCCCCCHHHHHHHHHcCCCeeehhh
Confidence 333444443 777666653332 1223456666666553 36899999999999999999999999999999
Q ss_pred cccCCCChHHHHHhhhc
Q 015899 377 SIVKQDDPGKGITGLFG 393 (398)
Q Consensus 377 aLmk~~dp~~~i~~L~~ 393 (398)
+++..++....+.+.++
T Consensus 110 ~~l~dp~~~~~~~~~~g 126 (247)
T 3tdn_A 110 AAVENPSLITQIAQTFG 126 (247)
T ss_dssp HHHHCTHHHHHHHHHHC
T ss_pred HHhhChHHHHHHHHHhC
Confidence 99987775555544443
No 143
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=97.41 E-value=0.002 Score=63.75 Aligned_cols=132 Identities=15% Similarity=0.158 Sum_probs=88.8
Q ss_pred HHHHHcCcCEEEEeccC-------C-------Ch-------H---HHHHHHHHHHH-cC--CcEEEEcC---------CH
Q 015899 255 YYARTKGADAVLLIAAV-------L-------PD-------L---DIRYMTKICKL-LG--LTALVEVH---------DE 298 (398)
Q Consensus 255 ~eAr~~GADaVLLiaai-------L-------~~-------~---~L~~Li~~a~~-LG--L~~LVEVh---------t~ 298 (398)
..|..+|.|+|=|.++- | +| . -+.+.++..++ .| ..+.|-++ +.
T Consensus 159 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~ 238 (349)
T 3hgj_A 159 RRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSL 238 (349)
T ss_dssp HHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCH
T ss_pred HHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCH
Confidence 35667899999998764 1 11 1 13455555553 54 44666555 34
Q ss_pred HH----HHHHhccCCCcEEeeccccCc-cc------ccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHc
Q 015899 299 RE----MDRVLGIEGIELIGINNRNLE-TF------EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA 367 (398)
Q Consensus 299 eE----l~rAl~l~Ga~iIGINnRdL~-tf------~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~ 367 (398)
+| ++...++ |+++|-+.+.... +. ..+++...++.+. .++++++.|||.|++++.++.+.
T Consensus 239 ~~~~~la~~L~~~-Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~--------~~iPVi~~Ggi~t~e~a~~~l~~ 309 (349)
T 3hgj_A 239 EDTLAFARRLKEL-GVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKR--------VGLRTGAVGLITTPEQAETLLQA 309 (349)
T ss_dssp HHHHHHHHHHHHT-TCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHH--------HCCEEEECSSCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc-CCCEEEEecCCcCcccccCCCccccHHHHHHHHHH--------cCceEEEECCCCCHHHHHHHHHC
Confidence 55 3333344 8999988742221 11 1234444555443 25789999999999999999999
Q ss_pred C-CCEEEEcccccCCCChHHHHHhhhcCc
Q 015899 368 G-VKAVLVGESIVKQDDPGKGITGLFGKD 395 (398)
Q Consensus 368 G-adaVLVGeaLmk~~dp~~~i~~L~~~~ 395 (398)
| ||.|.+|.+++..+|....+++-++.+
T Consensus 310 G~aD~V~iGR~~lanPdl~~k~~~~l~~~ 338 (349)
T 3hgj_A 310 GSADLVLLGRVLLRDPYFPLRAAKALGVA 338 (349)
T ss_dssp TSCSEEEESTHHHHCTTHHHHHHHHTTCC
T ss_pred CCceEEEecHHHHhCchHHHHHHHHCCCC
Confidence 9 999999999999999888888777644
No 144
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.41 E-value=0.0012 Score=67.78 Aligned_cols=118 Identities=16% Similarity=0.229 Sum_probs=91.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEecc-----
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAA----- 270 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa----- 270 (398)
.+..+.+..+.++|+++|.+-+-.+++.+.++.++.+|+. + ++||+.++ +.+..+...+..+|||+|.+...
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~-~p~~pvi~g~-~~t~e~a~~l~~~G~d~I~v~~~~G~~~ 313 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD-YPDLPVVAGN-VATPEGTEALIKAGADAVKVGVGPGSIC 313 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH-CTTSCEEEEE-ECSHHHHHHHHHTTCSEEEECSSCSTTC
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH-CCCceEEeCC-cCCHHHHHHHHHcCCCEEEEcCCCCccc
Confidence 4667899999999999999966555566677889999986 6 79998864 57888888889999999998321
Q ss_pred --------CCChH-HHHHHHHHHHHcCCcEEE--EcCCHHHHHHHhccCCCcEEeecc
Q 015899 271 --------VLPDL-DIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINN 317 (398)
Q Consensus 271 --------iL~~~-~L~~Li~~a~~LGL~~LV--EVht~eEl~rAl~l~Ga~iIGINn 317 (398)
-.+.. .+.++.+.++..++.+++ -+.+..++.+++.+ ||+.+++..
T Consensus 314 ~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~-GAd~V~iGr 370 (494)
T 1vrd_A 314 TTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAA-GAESVMVGS 370 (494)
T ss_dssp HHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHT-TCSEEEESH
T ss_pred cccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHc-CCCEEEECH
Confidence 02222 244454545557899999 78999999999998 999999873
No 145
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.41 E-value=0.0025 Score=67.08 Aligned_cols=123 Identities=15% Similarity=0.179 Sum_probs=87.8
Q ss_pred HHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHc--CCcEEE-EcCCHHHHHHHhccCCCcEE--eec------cccCcc
Q 015899 254 IYYARTKGADAVLLIAAVLPDLDIRYMTKICKLL--GLTALV-EVHDEREMDRVLGIEGIELI--GIN------NRNLET 322 (398)
Q Consensus 254 I~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~L--GL~~LV-EVht~eEl~rAl~l~Ga~iI--GIN------nRdL~t 322 (398)
+....++|+|.|.++.+-=..+...++++..++. .+++++ -|.|.+-++...++ ||+.| ||. .|....
T Consensus 286 ~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~a-GAD~vkVGiGpGSiCtTr~v~G 364 (556)
T 4af0_A 286 LKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAA-GADGLRIGMGSGSICITQEVMA 364 (556)
T ss_dssp HHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHH-TCSEEEECSSCSTTBCCTTTCC
T ss_pred HHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHc-CCCEEeecCCCCcccccccccC
Confidence 3344688999999998865544566677777765 677766 57888888888886 99966 443 444444
Q ss_pred cccC-hhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 323 FEVD-NSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 323 f~vD-l~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
..+- +....+.+... ...++++||-|||.++-|+.+...+|||+|.+|+-|-...
T Consensus 365 vG~PQ~tAi~~~a~~a-----~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMlGsllAGt~ 420 (556)
T 4af0_A 365 VGRPQGTAVYAVAEFA-----SRFGIPCIADGGIGNIGHIAKALALGASAVMMGGLLAGTT 420 (556)
T ss_dssp SCCCHHHHHHHHHHHH-----GGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBT
T ss_pred CCCcHHHHHHHHHHHH-----HHcCCCEEecCCcCcchHHHHHhhcCCCEEEEchhhcccc
Confidence 4433 22223333321 1247899999999999999999999999999999887544
No 146
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.41 E-value=0.0012 Score=68.23 Aligned_cols=123 Identities=9% Similarity=0.082 Sum_probs=92.8
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEecc---C-
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---V- 271 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa---i- 271 (398)
.+..+.|+.+.++|+++|.+.+-.++-....+.++.+|+. + ++||+.|+. .+..+...+..+|||+|.+... .
T Consensus 254 ~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~-~~~~pvi~~~v-~t~~~a~~l~~aGad~I~vg~~~G~~~ 331 (514)
T 1jcn_A 254 EDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK-YPHLQVIGGNV-VTAAQAKNLIDAGVDGLRVGMGCGSIC 331 (514)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH-CTTCEEEEEEE-CSHHHHHHHHHHTCSEEEECSSCSCCB
T ss_pred hhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh-CCCCceEeccc-chHHHHHHHHHcCCCEEEECCCCCccc
Confidence 4578889999999999999965432222235778889986 6 899998875 6777888889999999988320 1
Q ss_pred -------CC---hHHHHHHHHHHHHcCCcEEE--EcCCHHHHHHHhccCCCcEEeeccccCcc
Q 015899 272 -------LP---DLDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLET 322 (398)
Q Consensus 272 -------L~---~~~L~~Li~~a~~LGL~~LV--EVht~eEl~rAl~l~Ga~iIGINnRdL~t 322 (398)
.. ...+..+.+.++..++.++. -+.+..++.+++.+ ||+.+++...-+.+
T Consensus 332 ~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~-GAd~V~iG~~~l~~ 393 (514)
T 1jcn_A 332 ITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALAL-GASTVMMGSLLAAT 393 (514)
T ss_dssp TTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTS
T ss_pred ccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHc-CCCeeeECHHHHcC
Confidence 11 22355555666667999998 78999999999998 99999998655544
No 147
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.40 E-value=0.00074 Score=63.30 Aligned_cols=159 Identities=16% Similarity=0.147 Sum_probs=98.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhc--CCCCcEEe-ccccC--C--H---HHHHHHHHcCcCEE
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLC-KEFIV--D--A---WQIYYARTKGADAV 265 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a--~v~lPVL~-KDFIi--d--~---~QI~eAr~~GADaV 265 (398)
..++.++++...+.|++++-| ++..++.+++. +.+++|-. =+|-. + . +++.+|...|||.|
T Consensus 18 ~~~i~~l~~~a~~~~~~aVcv---------~p~~v~~~~~~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAdev 88 (220)
T 1ub3_A 18 LEEVAKAAEEALEYGFYGLCI---------PPSYVAWVRARYPHAPFRLVTVVGFPLGYQEKEVKALEAALACARGADEV 88 (220)
T ss_dssp HHHHHHHHHHHHHHTCSEEEC---------CGGGHHHHHHHCTTCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHhCCCEEEE---------CHHHHHHHHHHhCCCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCEE
Confidence 345666677777889998887 33445555432 23455421 23421 1 1 57889999999999
Q ss_pred EEeccC---CC--h----HHHHHHHHHHHHcCCcEEEEcC--CHHHHHHHhcc---CCCcEEeeccccCcccccChhhHH
Q 015899 266 LLIAAV---LP--D----LDIRYMTKICKLLGLTALVEVH--DEREMDRVLGI---EGIELIGINNRNLETFEVDNSNTK 331 (398)
Q Consensus 266 LLiaai---L~--~----~~L~~Li~~a~~LGL~~LVEVh--t~eEl~rAl~l---~Ga~iIGINnRdL~tf~vDl~~t~ 331 (398)
-+..-+ ++ . +++..+.+.|+..+|.+++|.. +.+++.++.++ .||++|=+.. .+.+-...++...
T Consensus 89 d~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsT-Gf~~~gat~~dv~ 167 (220)
T 1ub3_A 89 DMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTST-GFGPRGASLEDVA 167 (220)
T ss_dssp EEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC-SSSSCCCCHHHHH
T ss_pred EecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCC-CCCCCCCCHHHHH
Confidence 764432 11 1 2344455555556788899975 77777666433 2999987762 2221112233322
Q ss_pred HHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCC
Q 015899 332 KLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVK 370 (398)
Q Consensus 332 ~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gad 370 (398)
.+.+. . ...+.+.+.|||+|.+|+..+.++|++
T Consensus 168 ~m~~~-----v-g~~v~VkaaGGirt~~~al~~i~aGa~ 200 (220)
T 1ub3_A 168 LLVRV-----A-QGRAQVKAAGGIRDRETALRMLKAGAS 200 (220)
T ss_dssp HHHHH-----H-TTSSEEEEESSCCSHHHHHHHHHTTCS
T ss_pred HHHHh-----h-CCCCeEEEECCCCCHHHHHHHHHCCCc
Confidence 23222 1 246789999999999999999999999
No 148
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=97.40 E-value=0.00012 Score=69.11 Aligned_cols=186 Identities=11% Similarity=0.066 Sum_probs=106.6
Q ss_pred CHHHHHHHHHHcC--CcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHH---HHHHHHHcCcCEEEEeccCC
Q 015899 198 DPVEIARSYEKGG--AACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAW---QIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 198 dp~~iA~aY~~~G--A~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~---QI~eAr~~GADaVLLiaaiL 272 (398)
+..+.-+..++.| ++++=+-+|= |+.-++.-++.+|+.+..+++=+|=.-++.. -++.+..+|||+|-+-+..
T Consensus 25 ~l~~~~~~~~~~~~~v~~~Kv~~d~-~~~~G~~~v~~lr~~~~~v~lD~kl~Dip~t~~~~i~~~~~~Gad~vTvH~~~- 102 (245)
T 1eix_A 25 NRDDALAFVDKIDPRDCRLKVGKEM-FTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG- 102 (245)
T ss_dssp SHHHHHHHHTTSCTTTCEEEEEHHH-HHHHHHHHHHHHHHTTCCEEEEEEECSCHHHHHHHHHHHHHHTCSEEEEBGGG-
T ss_pred CHHHHHHHHHHhCccCcEEEEcHHH-HHHhCHHHHHHHHHCCCcEEEEeeccccHHHHHHHHHHHHhCCCCEEEEeccC-
Confidence 5666666667777 7784443333 5555678888898752333331232212332 3557778999999986643
Q ss_pred ChHHHHHHHHHHHHcCC-cE-EEEc----CC-HHHHHHHh-ccCCCcEE---eeccc--cCcccccChhhHHHHhhhhcc
Q 015899 273 PDLDIRYMTKICKLLGL-TA-LVEV----HD-EREMDRVL-GIEGIELI---GINNR--NLETFEVDNSNTKKLLEGERG 339 (398)
Q Consensus 273 ~~~~L~~Li~~a~~LGL-~~-LVEV----ht-~eEl~rAl-~l~Ga~iI---GINnR--dL~tf~vDl~~t~~L~~~i~~ 339 (398)
....+..+++.+++.|+ .+ ++-| ++ .++++... ...-.++| +..+. ....|-.......++.+.
T Consensus 103 g~~~l~~~~~~~~~~G~~~~~~l~v~~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~~ei~~lr~~--- 179 (245)
T 1eix_A 103 GARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQV--- 179 (245)
T ss_dssp CHHHHHHHHHTTGGGGGGCCEEEEECSCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECCGGGHHHHHHH---
T ss_pred CHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeCHHHHHHHHHh---
Confidence 44458899998888887 33 2222 22 24442210 00000111 11011 112222222223344332
Q ss_pred cccccCCceEEEecCCCCHH-----------HHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 340 EIIRQKNIIVVGESGLFTPD-----------DIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 340 ~~i~~~~v~vVAESGI~t~e-----------D~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
+ + +..++.-+||+. + .+..+.++|+|.++||++|++++||.++++++..
T Consensus 180 --~-~-~~~i~v~gGI~~-~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~ 239 (245)
T 1eix_A 180 --F-G-QEFKLVTPGIRP-QGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINA 239 (245)
T ss_dssp --H-C-SSSEEEECCBCC-TTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred --c-C-CCCEEEECCcCC-CCCCccchhccCCHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHH
Confidence 1 2 235667799953 3 4677789999999999999999999999988854
No 149
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.32 E-value=0.00083 Score=62.75 Aligned_cols=93 Identities=20% Similarity=0.122 Sum_probs=63.5
Q ss_pred CCHHHHHHHHHHcCCcEEEEec---cCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCC
Q 015899 197 FDPVEIARSYEKGGAACLSILT---DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLT---d~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (398)
.++.+.++.+++.|+..|-+.+ +..+++=+++.++.+++. +++||+.-..|-++.++.++..+|||+|++..+++.
T Consensus 156 ~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~-~~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~ 234 (266)
T 2w6r_A 156 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 234 (266)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC-
T ss_pred hhHHHHHHHHHHcCCCEEEEEeecCCCCcCCCCHHHHHHHHHH-cCCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHc
Confidence 4688999999999999998732 223444468899999987 899999999999999999999999999999999886
Q ss_pred hH-HHHHHHHHHHHcCCc
Q 015899 274 DL-DIRYMTKICKLLGLT 290 (398)
Q Consensus 274 ~~-~L~~Li~~a~~LGL~ 290 (398)
.. .+.++.++..+.|+.
T Consensus 235 ~~~~~~~~~~~l~~~g~~ 252 (266)
T 2w6r_A 235 REIDMRELKEYLKKHGVN 252 (266)
T ss_dssp ------------------
T ss_pred CCCCHHHHHHHHHHCCCc
Confidence 54 577777777766665
No 150
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.29 E-value=0.0022 Score=66.67 Aligned_cols=126 Identities=12% Similarity=0.142 Sum_probs=97.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEecc---C-
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---V- 271 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa---i- 271 (398)
..+..+.++++.++|+++|.|-+...++.+-.+.++.+|+...++||+.++. .+..+...+..+|||+|.+... +
T Consensus 254 ~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v-~t~e~a~~~~~aGad~i~vg~g~gsi~ 332 (511)
T 3usb_A 254 TADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNV-ATAEATKALIEAGANVVKVGIGPGSIC 332 (511)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEE-CSHHHHHHHHHHTCSEEEECSSCSTTC
T ss_pred ccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeee-ccHHHHHHHHHhCCCEEEECCCCcccc
Confidence 3467888999999999999998887777777888999988633589998874 5777888889999999987221 1
Q ss_pred ---------CCh-HHHHHHHHHHHHcCCcEEE--EcCCHHHHHHHhccCCCcEEeeccccCccc
Q 015899 272 ---------LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETF 323 (398)
Q Consensus 272 ---------L~~-~~L~~Li~~a~~LGL~~LV--EVht~eEl~rAl~l~Ga~iIGINnRdL~tf 323 (398)
.+. ..+.++.+.++..++.+++ -+.+.+++.+|+.+ ||+.+.+...=+.+.
T Consensus 333 ~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~-GA~~V~vGs~~~~~~ 395 (511)
T 3usb_A 333 TTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAA-GAHVVMLGSMFAGVA 395 (511)
T ss_dssp CHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTBT
T ss_pred ccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHh-CchhheecHHHhcCc
Confidence 122 2255556667778999998 67899999999998 999999986544443
No 151
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.28 E-value=0.0009 Score=61.96 Aligned_cols=93 Identities=20% Similarity=0.124 Sum_probs=75.9
Q ss_pred CCHHHHHHHHHHcCCcEEEEec-c--CCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCC
Q 015899 197 FDPVEIARSYEKGGAACLSILT-D--EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLT-d--~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (398)
.++.+.++.+++.|+..|-+.+ . ..+++=+++.++.+++. +++||+.-..|-++.++.++..+|||+|++..+++.
T Consensus 151 ~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~-~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~ 229 (253)
T 1thf_D 151 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 229 (253)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred CCHHHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHc
Confidence 3688999999999999887752 2 22232368899999886 899999988888899999999999999999988876
Q ss_pred hH-HHHHHHHHHHHcCCc
Q 015899 274 DL-DIRYMTKICKLLGLT 290 (398)
Q Consensus 274 ~~-~L~~Li~~a~~LGL~ 290 (398)
.. +++++.+..++.|+.
T Consensus 230 ~~~~~~~~~~~l~~~g~~ 247 (253)
T 1thf_D 230 REIDVRELKEYLKKHGVN 247 (253)
T ss_dssp TCSCHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHcCCc
Confidence 54 688888888888876
No 152
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.28 E-value=0.00088 Score=61.97 Aligned_cols=93 Identities=18% Similarity=0.073 Sum_probs=76.4
Q ss_pred CCHHHHHHHHHHcCCcEEEEec---cCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCC
Q 015899 197 FDPVEIARSYEKGGAACLSILT---DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLT---d~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (398)
.++.+.++.+++.||..|-+.+ +..+++=+++.++.+++. +++||+.-..|-++.++.++..+|||+|+++.+++.
T Consensus 152 ~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~-~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~ 230 (252)
T 1ka9_F 152 LHAVEWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEA-VGVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHF 230 (252)
T ss_dssp EEHHHHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred CcHHHHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHH-cCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHc
Confidence 4688999999999999887752 223333368999999987 899999999888899999999999999999988876
Q ss_pred hH-HHHHHHHHHHHcCCc
Q 015899 274 DL-DIRYMTKICKLLGLT 290 (398)
Q Consensus 274 ~~-~L~~Li~~a~~LGL~ 290 (398)
.. ++.++.+++..-|+.
T Consensus 231 ~~~~~~~~~~~l~~~~~~ 248 (252)
T 1ka9_F 231 GEIPIPKLKRYLAEKGVH 248 (252)
T ss_dssp TSSCHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHCCCC
Confidence 54 688888888877775
No 153
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=97.27 E-value=0.0018 Score=63.66 Aligned_cols=171 Identities=12% Similarity=0.141 Sum_probs=110.0
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE---ecc------c----cCCHHHHHHHHHcCcCE
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL---CKE------F----IVDAWQIYYARTKGADA 264 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL---~KD------F----Iid~~QI~eAr~~GADa 264 (398)
+...+..+..++|++++-.- .|=.+|+..+-.. ..--++ ..+ | -+.-|.+.+|..+|||+
T Consensus 72 ~l~~~~~~~~~~Gvdavl~~------~gi~~d~~Li~~L-~~~tv~gs~~~ggl~g~~~~~d~~~~~~sVe~AvrlGADa 144 (307)
T 3fok_A 72 LLERMAIALSRPGVDGVLGT------PDIIDDLAALGLL-DDKIVVGSMNRGGLRGASFEMDDRYTGYNVSSMVDRGVDF 144 (307)
T ss_dssp HHHHHHHHHHSTTCCEEEEC------HHHHHHHHHTTCC-TTCEEEEECCCCSCTTCTTTTSCCCCSCCHHHHHHHTCCE
T ss_pred HHHHHHHHHhccCCCEEEEC------cchhhcccceEEe-cCcccccccCccccccCCCCccccccccCHHHHHHCCCCE
Confidence 35566667789999998762 2334666655432 122222 121 1 12335799999999999
Q ss_pred EEEeccC-C-C---h---HHHHHHHHHHHHcCCcEEEE--c-----------CCHHHHH----HHhccCCCc----EEee
Q 015899 265 VLLIAAV-L-P---D---LDIRYMTKICKLLGLTALVE--V-----------HDEREMD----RVLGIEGIE----LIGI 315 (398)
Q Consensus 265 VLLiaai-L-~---~---~~L~~Li~~a~~LGL~~LVE--V-----------ht~eEl~----rAl~l~Ga~----iIGI 315 (398)
|-+...+ + + . +++.++++.|++.||-+|+| + ++.+-+. .+.++ |++ +|=+
T Consensus 145 V~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaEL-GADs~~tivK~ 223 (307)
T 3fok_A 145 AKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGL-GNDSSYTWMKL 223 (307)
T ss_dssp EEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTC-SSCCSSEEEEE
T ss_pred EEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHh-CCCcCCCEEEe
Confidence 7754333 2 2 1 24666677788899999998 2 3444443 34566 999 8887
Q ss_pred ccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCC--HHH----HHHHHH-cCCCEEEEcccccC--CCChHH
Q 015899 316 NNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFT--PDD----IAYVQE-AGVKAVLVGESIVK--QDDPGK 386 (398)
Q Consensus 316 NnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t--~eD----~~~l~~-~GadaVLVGeaLmk--~~dp~~ 386 (398)
+-- +...++... ..+++|..||=.+ +++ ++..++ .|+.|+.+|..+.. .+||.+
T Consensus 224 ~y~---------e~f~~Vv~a--------~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ~~~~dp~~ 286 (307)
T 3fok_A 224 PVV---------EEMERVMES--------TTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYPQDGDVAA 286 (307)
T ss_dssp ECC---------TTHHHHGGG--------CSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSCSSSCHHH
T ss_pred CCc---------HHHHHHHHh--------CCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhccCCCCCHHH
Confidence 532 234666554 2356666666653 333 455667 69999999999999 899999
Q ss_pred HHHhhhc
Q 015899 387 GITGLFG 393 (398)
Q Consensus 387 ~i~~L~~ 393 (398)
.++.+..
T Consensus 287 ~v~al~~ 293 (307)
T 3fok_A 287 AVDTAAR 293 (307)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887754
No 154
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=97.27 E-value=0.0013 Score=65.06 Aligned_cols=87 Identities=21% Similarity=0.279 Sum_probs=67.5
Q ss_pred HHHHHHHHHHc--CCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecC
Q 015899 277 IRYMTKICKLL--GLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESG 354 (398)
Q Consensus 277 L~~Li~~a~~L--GL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESG 354 (398)
+.+.++.+++. ...+.|||.|++|++.|+++ |+++|..-|- +++...+.++.+ ...+.+.+.||
T Consensus 218 i~~Av~~ar~~~p~~kIeVEVdtldea~eAl~a-GaD~I~LDn~-------~~~~l~~av~~l------~~~v~ieaSGG 283 (320)
T 3paj_A 218 IRQAISTAKQLNPGKPVEVETETLAELEEAISA-GADIIMLDNF-------SLEMMREAVKIN------AGRAALENSGN 283 (320)
T ss_dssp HHHHHHHHHHHSTTSCEEEEESSHHHHHHHHHT-TCSEEEEESC-------CHHHHHHHHHHH------TTSSEEEEESS
T ss_pred HHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHc-CCCEEEECCC-------CHHHHHHHHHHh------CCCCeEEEECC
Confidence 44555555643 46788999999999999997 9999999763 444555555432 23678999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEcccc
Q 015899 355 LFTPDDIAYVQEAGVKAVLVGESI 378 (398)
Q Consensus 355 I~t~eD~~~l~~~GadaVLVGeaL 378 (398)
| |++.+..+.+.|+|.+-||...
T Consensus 284 I-t~~~I~~~a~tGVD~isvGalt 306 (320)
T 3paj_A 284 I-TLDNLKECAETGVDYISVGALT 306 (320)
T ss_dssp C-CHHHHHHHHTTTCSEEECTHHH
T ss_pred C-CHHHHHHHHHcCCCEEEECcee
Confidence 9 8999999999999999999743
No 155
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=97.26 E-value=0.0019 Score=66.29 Aligned_cols=98 Identities=17% Similarity=0.207 Sum_probs=63.3
Q ss_pred CCc-EEEEcC---CHHH----HHHHhccCCCcEEeeccccCcccccC--------------hhhHHHHhhhhcccccccC
Q 015899 288 GLT-ALVEVH---DERE----MDRVLGIEGIELIGINNRNLETFEVD--------------NSNTKKLLEGERGEIIRQK 345 (398)
Q Consensus 288 GL~-~LVEVh---t~eE----l~rAl~l~Ga~iIGINnRdL~tf~vD--------------l~~t~~L~~~i~~~~i~~~ 345 (398)
.+. ++|-+. +.++ ++.+.+. |++.|-+.|+......++ ...+.+++..++.. + +.
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~a-GaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~-v-~~ 372 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLET-NIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNY-T-NK 372 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHT-TCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHH-T-TT
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHc-CCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHH-c-CC
Confidence 345 567665 2334 4555665 999888888755322110 11123333332211 1 23
Q ss_pred CceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC-CCChHHHH
Q 015899 346 NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK-QDDPGKGI 388 (398)
Q Consensus 346 ~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk-~~dp~~~i 388 (398)
++++|+-|||.|++|+.++..+|||+|-||++++. .++....+
T Consensus 373 ~iPVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~~gP~l~~~i 416 (443)
T 1tv5_A 373 QIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQI 416 (443)
T ss_dssp CSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHHGGGHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcChHHHHHH
Confidence 68999999999999999999999999999999764 66544444
No 156
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=97.24 E-value=0.0023 Score=64.09 Aligned_cols=125 Identities=14% Similarity=0.173 Sum_probs=90.5
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEe---ccC---
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLI---AAV--- 271 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLi---aai--- 271 (398)
+..+.++...++|++.|+|-|-.....+-.+.++.+|+...++||+.+. +.++.+...+..+|||+|.+. ...
T Consensus 108 ~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~-v~t~e~A~~a~~aGAD~I~vG~gpGs~~~t 186 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN-VATAEGARALIEAGVSAVKVGIGPGSICTT 186 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEE-ECSHHHHHHHHHHTCSEEEECSSCSTTBCH
T ss_pred hHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeee-eCCHHHHHHHHHcCCCEEEEecCCCCCCCc
Confidence 4467889999999999998664333333345567787762378988754 578889999999999999983 111
Q ss_pred -------CCh-HHHHHHHHHHHHcCCcEEE--EcCCHHHHHHHhccCCCcEEeeccccCcccc
Q 015899 272 -------LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFE 324 (398)
Q Consensus 272 -------L~~-~~L~~Li~~a~~LGL~~LV--EVht~eEl~rAl~l~Ga~iIGINnRdL~tf~ 324 (398)
.+. ..+.++.+.++..++.++. -+.+..++.+++.+ ||+.+++..+=+.+-+
T Consensus 187 r~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~-GAd~V~vGs~f~~t~E 248 (366)
T 4fo4_A 187 RIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAA-GASCVMVGSMFAGTEE 248 (366)
T ss_dssp HHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTBTT
T ss_pred ccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHc-CCCEEEEChHhhcCCC
Confidence 122 1244555555578999999 78999999999998 9999999876555543
No 157
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.22 E-value=0.0027 Score=63.43 Aligned_cols=121 Identities=13% Similarity=0.213 Sum_probs=88.3
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEecc---C-----
Q 015899 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---V----- 271 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa---i----- 271 (398)
.+.++.+.++||+.|.+.+-......-.+.++.+|+. .++||+.+. +.++.++..+..+|||+|.+... +
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~-~~~~Vivg~-v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~ 184 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK-MNIDVIVGN-VVTEEATKELIENGADGIKVGIGPGSICTTRI 184 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHH-CCCEEEEEE-ECSHHHHHHHHHTTCSEEEECSSCCTTCCHHH
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHh-cCCcEEEcc-CCCHHHHHHHHHcCcCEEEEecCCCcCCCccc
Confidence 7889999999999998855432211224567777876 699999865 47888899999999999998310 1
Q ss_pred -----CCh-HHHHHHHHHHHHcCCcEEE--EcCCHHHHHHHhccCCCcEEeeccccCccc
Q 015899 272 -----LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETF 323 (398)
Q Consensus 272 -----L~~-~~L~~Li~~a~~LGL~~LV--EVht~eEl~rAl~l~Ga~iIGINnRdL~tf 323 (398)
.+. ..+.++.+.++..++.++. -++|.+++.+++.+ ||+.+++...-+.+-
T Consensus 185 ~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~-GAd~V~vGs~~~~t~ 243 (361)
T 3khj_A 185 VAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAV-GASSVMIGSILAGTE 243 (361)
T ss_dssp HTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHH-TCSEEEESTTTTTBT
T ss_pred ccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHc-CCCEEEEChhhhcCC
Confidence 122 2245555556667999988 48899999999998 999999886555443
No 158
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=97.21 E-value=0.003 Score=62.76 Aligned_cols=121 Identities=11% Similarity=0.093 Sum_probs=87.2
Q ss_pred HHHHHHHHHc--CCcEEEEeccCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEecc------
Q 015899 200 VEIARSYEKG--GAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAA------ 270 (398)
Q Consensus 200 ~~iA~aY~~~--GA~aISVLTd~~~F~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa------ 270 (398)
.+.+....+. |+++|.+-+-..+..+..+.++.+|+. . ++||+.++ +.++.+...+..+|||+|.+...
T Consensus 120 ~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~-~~~~~vi~g~-v~t~e~A~~a~~aGaD~I~v~~g~G~~~~ 197 (351)
T 2c6q_A 120 FEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKR-FPQHTIMAGN-VVTGEMVEELILSGADIIKVGIGPGSVCT 197 (351)
T ss_dssp HHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHH-CTTSEEEEEE-ECSHHHHHHHHHTTCSEEEECSSCSTTBC
T ss_pred HHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHh-cCCCeEEEEe-CCCHHHHHHHHHhCCCEEEECCCCCcCcC
Confidence 3456666665 899888743222222234678888886 6 89999875 57888899999999999977321
Q ss_pred -------CCCh-HHHHHHHHHHHHcCCcEEE--EcCCHHHHHHHhccCCCcEEeeccccCccc
Q 015899 271 -------VLPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETF 323 (398)
Q Consensus 271 -------iL~~-~~L~~Li~~a~~LGL~~LV--EVht~eEl~rAl~l~Ga~iIGINnRdL~tf 323 (398)
-.+. ..|.++.+.+...++.++. -+.|..++.+|+.+ ||+.+++...-+.+.
T Consensus 198 ~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlal-GA~~V~vG~~fl~~~ 259 (351)
T 2c6q_A 198 TRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGA-GADFVMLGGMLAGHS 259 (351)
T ss_dssp HHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTBT
T ss_pred ccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHc-CCCceeccHHHhcCc
Confidence 0111 1245666666667999999 78999999999998 999999997766543
No 159
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=97.19 E-value=0.0016 Score=63.89 Aligned_cols=111 Identities=14% Similarity=0.166 Sum_probs=79.0
Q ss_pred HHHHHHHHHcCc--------CEEEEecc---CCChHHHHHHHHHHHH--cCCcEEEEcCCHHHHHHHhccCCCcEEeecc
Q 015899 251 AWQIYYARTKGA--------DAVLLIAA---VLPDLDIRYMTKICKL--LGLTALVEVHDEREMDRVLGIEGIELIGINN 317 (398)
Q Consensus 251 ~~QI~eAr~~GA--------DaVLLiaa---iL~~~~L~~Li~~a~~--LGL~~LVEVht~eEl~rAl~l~Ga~iIGINn 317 (398)
..|-|.++.-|+ |+||+=-- ... .+.+.++.+++ ..+.+-|||.|++|++.|+++ |+++|-..|
T Consensus 159 ~lekyAV~~GGg~nHR~gL~D~vLIKdNHi~~~G--~i~~Av~~ar~~~p~~kIeVEv~tl~e~~eAl~a-GaDiImLDn 235 (300)
T 3l0g_A 159 MLDKYSVCIGGGESYRDNLCDGVLIKDNHIASCG--SITLAIQRLRKNLKNEYIAIECDNISQVEESLSN-NVDMILLDN 235 (300)
T ss_dssp HHHHHHHHHTTCBCSCSSTTSCEEECHHHHHHHS--CHHHHHHHHHHHSSSCCEEEEESSHHHHHHHHHT-TCSEEEEES
T ss_pred HHHHHHHHhcCCcccccCCcceEEEcHhHHHHhC--CHHHHHHHHHHhCCCCCEEEEECCHHHHHHHHHc-CCCEEEECC
Confidence 356777777777 45555100 111 14455556664 367889999999999999997 999998876
Q ss_pred ccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccc
Q 015899 318 RNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 378 (398)
Q Consensus 318 RdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 378 (398)
- +++...+.++.+ ...+.+-+.||| |++.+..+.+.|+|.+-+|...
T Consensus 236 ~-------s~~~l~~av~~~------~~~v~leaSGGI-t~~~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 236 M-------SISEIKKAVDIV------NGKSVLEVSGCV-NIRNVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp C-------CHHHHHHHHHHH------TTSSEEEEESSC-CTTTHHHHHTTTCSEEECGGGT
T ss_pred C-------CHHHHHHHHHhh------cCceEEEEECCC-CHHHHHHHHHcCCCEEEeCccc
Confidence 3 334455555542 235788889999 9999999999999999999543
No 160
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.17 E-value=0.0013 Score=59.87 Aligned_cols=93 Identities=24% Similarity=0.254 Sum_probs=74.4
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCC-c-CCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCC
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEK-Y-FKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~-~-F~G-s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (398)
.++.+.++.+.+.||+.|-+..-.. . .+| +++.++.+++. +++||+.-..|-++.++.++..+|||+|++..+++.
T Consensus 154 ~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~-~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 154 LDAVKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADS-VRIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred CCHHHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHh-cCCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHc
Confidence 4788999999999999998753211 1 112 57889999887 799999888887889999999999999999988775
Q ss_pred hH-HHHHHHHHHHHcCCc
Q 015899 274 DL-DIRYMTKICKLLGLT 290 (398)
Q Consensus 274 ~~-~L~~Li~~a~~LGL~ 290 (398)
.. .++++.+..++.|+.
T Consensus 233 ~~~~~~~~~~~l~~~g~~ 250 (253)
T 1h5y_A 233 RVLSIAQVKRYLKERGVE 250 (253)
T ss_dssp TSSCHHHHHHHHHHTTCB
T ss_pred CCCCHHHHHHHHHHcCCC
Confidence 43 578888888888876
No 161
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.17 E-value=0.0043 Score=61.93 Aligned_cols=123 Identities=15% Similarity=0.168 Sum_probs=86.5
Q ss_pred CHHHHHHHHHHcCCcEEEEeccC---CcCC--CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEecc--
Q 015899 198 DPVEIARSYEKGGAACLSILTDE---KYFK--GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA-- 270 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~---~~F~--Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa-- 270 (398)
+..+.++.+.+.|+++|.+-..+ .|++ +..+++..+|+. +++||+.|+ +.++.+...+..+|||+|.+...
T Consensus 166 ~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~-~~~pvi~gg-i~t~e~a~~~~~~Gad~i~vg~Gg~ 243 (393)
T 2qr6_A 166 NVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGS-LDVPVIAGG-VNDYTTALHMMRTGAVGIIVGGGEN 243 (393)
T ss_dssp THHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHH-CSSCEEEEC-CCSHHHHHHHHTTTCSEEEESCCSC
T ss_pred cHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHh-cCCCEEECC-cCCHHHHHHHHHcCCCEEEECCCcc
Confidence 56788999999999999764222 2433 266789999987 899999965 68888999999999999999431
Q ss_pred --------CCChH-HHHHHHHHH----HHcC---CcEEEE--cCCHHHHHHHhccCCCcEEeeccccCccc
Q 015899 271 --------VLPDL-DIRYMTKIC----KLLG---LTALVE--VHDEREMDRVLGIEGIELIGINNRNLETF 323 (398)
Q Consensus 271 --------iL~~~-~L~~Li~~a----~~LG---L~~LVE--Vht~eEl~rAl~l~Ga~iIGINnRdL~tf 323 (398)
-.+.. .+.++.+.+ ..+| +.+++. |++..++.+++.+ ||+.+++...-+.+.
T Consensus 244 ~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalal-GA~~V~iG~~~l~~~ 313 (393)
T 2qr6_A 244 TNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIAC-GADAVVLGSPLARAE 313 (393)
T ss_dssp CHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHH-TCSEEEECGGGGGST
T ss_pred cccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHc-CCCEEEECHHHHcCC
Confidence 02221 133333332 2256 777774 7899999999998 999999986655444
No 162
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=97.17 E-value=0.0016 Score=66.37 Aligned_cols=125 Identities=17% Similarity=0.153 Sum_probs=80.8
Q ss_pred CcCEEEEeccC--------C-ChHHHHHHHHHHHHc---------------------CCc-EEEEcC---CH---HH-HH
Q 015899 261 GADAVLLIAAV--------L-PDLDIRYMTKICKLL---------------------GLT-ALVEVH---DE---RE-MD 302 (398)
Q Consensus 261 GADaVLLiaai--------L-~~~~L~~Li~~a~~L---------------------GL~-~LVEVh---t~---eE-l~ 302 (398)
-||+|-+..+. | +.+.+.++++..++. ... ++|-+. +. .+ ++
T Consensus 211 ~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~ 290 (415)
T 3i65_A 211 YADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIAD 290 (415)
T ss_dssp GCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHH
T ss_pred hCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHHHHH
Confidence 38999998763 2 345577777766542 455 677765 22 22 34
Q ss_pred HHhccCCCcEEeeccccCccccc--------------ChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcC
Q 015899 303 RVLGIEGIELIGINNRNLETFEV--------------DNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAG 368 (398)
Q Consensus 303 rAl~l~Ga~iIGINnRdL~tf~v--------------Dl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~G 368 (398)
.+.+. |++-|-+.|+......+ +...+.+++..++.. + +.++++|+.|||.|++|+.++..+|
T Consensus 291 ~a~~a-GaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~-v-~~~iPIIg~GGI~s~eDa~e~l~aG 367 (415)
T 3i65_A 291 VLLET-NIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNY-T-NKQIPIIASGGIFSGLDALEKIEAG 367 (415)
T ss_dssp HHHHH-TCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHH-T-TTCSCEEECSSCCSHHHHHHHHHHT
T ss_pred HHHHc-CCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHH-h-CCCCCEEEECCCCCHHHHHHHHHcC
Confidence 44554 99988777765532111 122233444433221 1 2368999999999999999999999
Q ss_pred CCEEEEcccccCC-CChHHHH
Q 015899 369 VKAVLVGESIVKQ-DDPGKGI 388 (398)
Q Consensus 369 adaVLVGeaLmk~-~dp~~~i 388 (398)
|++|.||++++.. +.....+
T Consensus 368 Ad~VqIgra~l~~GP~~~~~i 388 (415)
T 3i65_A 368 ASVCQLYSCLVFNGMKSAVQI 388 (415)
T ss_dssp EEEEEESHHHHHHGGGHHHHH
T ss_pred CCEEEEcHHHHhcCHHHHHHH
Confidence 9999999999754 5544443
No 163
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=97.13 E-value=0.004 Score=59.20 Aligned_cols=162 Identities=15% Similarity=0.177 Sum_probs=98.1
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhc--CCCCcEE-eccc--cCC-----HHHHHHHHHcCcCEEE
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLL-CKEF--IVD-----AWQIYYARTKGADAVL 266 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a--~v~lPVL-~KDF--Iid-----~~QI~eAr~~GADaVL 266 (398)
.++.+++....++|++++-| ++.++..+++. +.++.|- .=+| .-+ -+++.+|...|||.|-
T Consensus 43 ~~i~~lc~eA~~~~~~aVcV---------~p~~v~~a~~~L~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEID 113 (239)
T 3ngj_A 43 EQIRKLCSEAAEYKFASVCV---------NPTWVPLCAELLKGTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEEVD 113 (239)
T ss_dssp HHHHHHHHHHHHHTCSEEEE---------CGGGHHHHHHHHTTSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHhcCCcEEEE---------CHHHHHHHHHHhCCCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCEEE
Confidence 34556667777889998888 33345555432 2344432 1244 111 1467788899999987
Q ss_pred EeccC---CC---h---HHHHHHHHHHHHcCCcEEEEcC--CHHHHHHH----hccCCCcEEeeccccCcccccChhhHH
Q 015899 267 LIAAV---LP---D---LDIRYMTKICKLLGLTALVEVH--DEREMDRV----LGIEGIELIGINNRNLETFEVDNSNTK 331 (398)
Q Consensus 267 Liaai---L~---~---~~L~~Li~~a~~LGL~~LVEVh--t~eEl~rA----l~l~Ga~iIGINnRdL~tf~vDl~~t~ 331 (398)
+-.-+ ++ + +++..+.+.|+..-+.+++|+. |.+|+.++ .++ |+++|=+.. .+.+-...++...
T Consensus 114 mViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~a-GADfVKTST-Gf~~ggAt~~dv~ 191 (239)
T 3ngj_A 114 MVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAA-GAEYVKTST-GFGTHGATPEDVK 191 (239)
T ss_dssp EECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHH-TCSEEECCC-SSSSCCCCHHHHH
T ss_pred EEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHH-CcCEEECCC-CCCCCCCCHHHHH
Confidence 64442 22 1 2344444444333377888986 78888887 666 999987652 1111112222222
Q ss_pred HHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccc
Q 015899 332 KLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 377 (398)
Q Consensus 332 ~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 377 (398)
-+.+.+ ...+.+.+.|||+|.+|+..+.++||+. ||.|
T Consensus 192 lmr~~v------g~~v~VKasGGIrt~~da~~~i~aGA~r--iGtS 229 (239)
T 3ngj_A 192 LMKDTV------GDKALVKAAGGIRTFDDAMKMINNGASR--IGAS 229 (239)
T ss_dssp HHHHHH------GGGSEEEEESSCCSHHHHHHHHHTTEEE--EEES
T ss_pred HHHHhh------CCCceEEEeCCCCCHHHHHHHHHhcccc--eecc
Confidence 222221 2467899999999999999999999984 3544
No 164
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=97.12 E-value=0.0014 Score=63.13 Aligned_cols=73 Identities=23% Similarity=0.143 Sum_probs=62.7
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcCC---CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCC
Q 015899 200 VEIARSYEKGGAACLSILTDEKYFK---GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F~---Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (398)
..+|+.+++.|++++-.+..+---+ -+++.|+.+++. .++||++...|-+|.++.+|.++|||+|++..++..
T Consensus 146 ~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~-~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 146 PIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEE-AKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAH 221 (265)
T ss_dssp HHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHH-CSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred HHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhc-CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 4689999999999997766642221 278999999986 899999999999999999999999999999998864
No 165
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=97.11 E-value=0.0078 Score=56.23 Aligned_cols=177 Identities=15% Similarity=0.123 Sum_probs=103.0
Q ss_pred CHHHHHHHHHHcC--CcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE--eccccCCHH---HHHHHHHcCcCEEEEecc
Q 015899 198 DPVEIARSYEKGG--AACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--CKEFIVDAW---QIYYARTKGADAVLLIAA 270 (398)
Q Consensus 198 dp~~iA~aY~~~G--A~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL--~KDFIid~~---QI~eAr~~GADaVLLiaa 270 (398)
+..+.-+..++.| +.++.|-+ +-|...+++-++.+|+. .+.+|+ .|=.-++.. .+..+..+|||.|.+-+
T Consensus 23 ~~~~a~~~v~~~~~~v~~~Kvg~-~lf~~~G~~~v~~l~~~-~g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~- 99 (228)
T 3m47_A 23 NRDDALRVTGEVREYIDTVKIGY-PLVLSEGMDIIAEFRKR-FGCRIIADFKVADIPETNEKICRATFKAGADAIIVHG- 99 (228)
T ss_dssp SHHHHHHHHHTTTTTCSEEEEEH-HHHHHHCTHHHHHHHHH-HCCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEES-
T ss_pred CHHHHHHHHHHcCCcccEEEEcH-HHHHhcCHHHHHHHHhc-CCCeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEec-
Confidence 3444444445555 78999955 55666677888888872 245554 232223322 56667789999988844
Q ss_pred CCChHHHHHHHHHHHHcCCcE--EEEcCCHH-----------HHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhh
Q 015899 271 VLPDLDIRYMTKICKLLGLTA--LVEVHDER-----------EMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGE 337 (398)
Q Consensus 271 iL~~~~L~~Li~~a~~LGL~~--LVEVht~e-----------El~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i 337 (398)
....+.++.+++.+++.|..+ |.+..+.. -+..+.+. |.+-+-+.. ...+...++.+..
T Consensus 100 ~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~-G~~GvV~~a-------t~~~e~~~ir~~~ 171 (228)
T 3m47_A 100 FPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDL-GVKNYVGPS-------TRPERLSRLREII 171 (228)
T ss_dssp TTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHT-TCCEEECCS-------SCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHh-CCcEEEECC-------CChHHHHHHHHhc
Confidence 445556999999888766544 44555542 12233333 443211111 1233344444431
Q ss_pred cccccccCCceEEEecCCCCH-HHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 338 RGEIIRQKNIIVVGESGLFTP-DDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 338 ~~~~i~~~~v~vVAESGI~t~-eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
+.+..+ .-.||.-. .+. .+.++|+|.++||.+|++++||.++++++..
T Consensus 172 ------~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~~~ 220 (228)
T 3m47_A 172 ------GQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAGAIE 220 (228)
T ss_dssp ------CSSSEE-EECC----------CGGGTCSEEEECHHHHTSSCHHHHHHHHHH
T ss_pred ------CCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHHHHH
Confidence 233444 44566321 156 7778999999999999999999999988754
No 166
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.10 E-value=0.0041 Score=63.55 Aligned_cols=121 Identities=18% Similarity=0.180 Sum_probs=93.5
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEec-------
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIA------- 269 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLia------- 269 (398)
...+.|+.+.++|+++|-+-+-.++|.+.++.+..+++. + ++||+.+ .+.+......+..+|||+|.+..
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~-~p~~pvi~G-~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~ 310 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAH-FPNRTLIAG-NIATAEGARALYDAGVDVVKVGIGPGSICT 310 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHH-CSSSCEEEE-EECSHHHHHHHHHTTCSEEEECSSCCTTBC
T ss_pred hHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHH-CCCCcEeCC-CccCHHHHHHHHHcCCCEEEECccCCcceE
Confidence 457889999999999999877666666667788888886 6 8999955 55778888889999999998752
Q ss_pred -cC-----CC-hHHHHHHHHHHHHcCCcEEE--EcCCHHHHHHHhccCCCcEEeeccccCc
Q 015899 270 -AV-----LP-DLDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLE 321 (398)
Q Consensus 270 -ai-----L~-~~~L~~Li~~a~~LGL~~LV--EVht~eEl~rAl~l~Ga~iIGINnRdL~ 321 (398)
.. .+ ...+.++...+...++.+++ -+++.+++.+++.+ ||+.+++...-+.
T Consensus 311 tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~-GA~~v~vG~~~~~ 370 (491)
T 1zfj_A 311 TRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAA-GGNAVMLGSMFAG 370 (491)
T ss_dssp HHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTT
T ss_pred EeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHc-CCcceeeCHHhhC
Confidence 00 11 22356666666678999988 57899999999998 9999999754443
No 167
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=97.03 E-value=0.0044 Score=62.88 Aligned_cols=122 Identities=14% Similarity=0.210 Sum_probs=87.0
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEec--------cC
Q 015899 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIA--------AV 271 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLia--------ai 271 (398)
.+.++++.++|++.|.+-|-...-.+-.+.++.+|+. .++||+.+.. .+..+...+..+|||+|.+.. ..
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~-~~i~Vi~g~V-~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~ 223 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK-MNIDVIVGNV-VTEEATKELIENGADGIKVGIGPGSICTTRI 223 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTT-CCCEEEEEEE-CSHHHHHHHHHTTCSEEEECC---------C
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhc-CCCeEEEeec-CCHHHHHHHHHcCCCEEEEeCCCCcCccccc
Confidence 6889999999999997633211111114677788875 6899998653 678888889999999999831 11
Q ss_pred -----CCh-HHHHHHHHHHHHcCCcEEE--EcCCHHHHHHHhccCCCcEEeeccccCcccc
Q 015899 272 -----LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFE 324 (398)
Q Consensus 272 -----L~~-~~L~~Li~~a~~LGL~~LV--EVht~eEl~rAl~l~Ga~iIGINnRdL~tf~ 324 (398)
.+. ..+.++.+.++..++.++. -++|.+++.+++.+ ||+.+.+..+=+.+-+
T Consensus 224 ~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalal-GAd~V~vGt~f~~t~E 283 (400)
T 3ffs_A 224 VAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAV-GASSVMIGSILAGTEE 283 (400)
T ss_dssp CSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTT-TCSEEEECGGGTTBTT
T ss_pred ccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHc-CCCEEEEChHHhcCCC
Confidence 122 1244444444557899999 58999999999998 9999998866555544
No 168
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=97.03 E-value=0.0052 Score=61.17 Aligned_cols=125 Identities=18% Similarity=0.202 Sum_probs=83.5
Q ss_pred HHHHcCcCEEEEeccC-------C-------Ch----------HHHHHHHHHHHH-cCC-cEEE-----EcC--------
Q 015899 256 YARTKGADAVLLIAAV-------L-------PD----------LDIRYMTKICKL-LGL-TALV-----EVH-------- 296 (398)
Q Consensus 256 eAr~~GADaVLLiaai-------L-------~~----------~~L~~Li~~a~~-LGL-~~LV-----EVh-------- 296 (398)
.|.++|+|+|=|.++- | +| .-+.++++..++ +|= .+.| |.+
T Consensus 169 ~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~ 248 (364)
T 1vyr_A 169 NAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPN 248 (364)
T ss_dssp HHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTT
T ss_pred HHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCCC
Confidence 4567899999997642 1 11 124555665554 442 4555 322
Q ss_pred CHHH----HHHHhccCCCcEEeeccccCccc-ccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcC-CC
Q 015899 297 DERE----MDRVLGIEGIELIGINNRNLETF-EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAG-VK 370 (398)
Q Consensus 297 t~eE----l~rAl~l~Ga~iIGINnRdL~tf-~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~G-ad 370 (398)
+.++ ++.+.+. |++.|.+.++...+. ..+.+...++.+. .++++|+-||| |++++.++.+.| ||
T Consensus 249 ~~~~~~~~a~~l~~~-G~d~i~v~~~~~~~~~~~~~~~~~~v~~~--------~~iPvi~~Ggi-t~~~a~~~l~~g~aD 318 (364)
T 1vyr_A 249 EEADALYLIEELAKR-GIAYLHMSETDLAGGKPYSEAFRQKVRER--------FHGVIIGAGAY-TAEKAEDLIGKGLID 318 (364)
T ss_dssp HHHHHHHHHHHHHHT-TCSEEEEECCBTTBCCCCCHHHHHHHHHH--------CCSEEEEESSC-CHHHHHHHHHTTSCS
T ss_pred CHHHHHHHHHHHHHh-CCCEEEEecCcccCCCcccHHHHHHHHHH--------CCCCEEEECCc-CHHHHHHHHHCCCcc
Confidence 3333 3334454 999999987654321 1234444444433 35789999999 999999999998 99
Q ss_pred EEEEcccccCCCChHHHHHh
Q 015899 371 AVLVGESIVKQDDPGKGITG 390 (398)
Q Consensus 371 aVLVGeaLmk~~dp~~~i~~ 390 (398)
+|.+|.+++..++....+++
T Consensus 319 ~V~~gR~~l~~P~~~~~~~~ 338 (364)
T 1vyr_A 319 AVAFGRDYIANPDLVARLQK 338 (364)
T ss_dssp EEEESHHHHHCTTHHHHHHH
T ss_pred EEEECHHHHhChhHHHHHHc
Confidence 99999999999998888764
No 169
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.96 E-value=0.0085 Score=61.71 Aligned_cols=174 Identities=14% Similarity=0.115 Sum_probs=120.6
Q ss_pred CceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEec-cCCcCCCCHHHHHHHHhc-CCCCcEEeccccCCHHH
Q 015899 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT-DEKYFKGSFENLEAVRSA-GVKCPLLCKEFIVDAWQ 253 (398)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLT-d~~~F~Gs~edL~~Ir~a-~v~lPVL~KDFIid~~Q 253 (398)
.+-+++|| .+..++.++. +.||..|.|.- +-+-|.=+++....+.+. ..+.++++--.|-++.+
T Consensus 157 gm~~LvEv-------------h~~eE~~~A~-~lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~ed 222 (452)
T 1pii_A 157 EMGVLTEV-------------SNEEEQERAI-ALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQ 222 (452)
T ss_dssp TCEEEEEE-------------CSHHHHHHHH-HTTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCCCHHH
T ss_pred CCeEEEEe-------------CCHHHHHHHH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHH
Confidence 46888988 3667766555 46899999962 222355567777776553 12678999999999999
Q ss_pred HHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHH
Q 015899 254 IYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKL 333 (398)
Q Consensus 254 I~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L 333 (398)
+..++.+ ||+||++.++...++....++... .|.-=++-+.+.+++..|.++ |++.+|..-..-..=.++++++.+|
T Consensus 223 v~~~~~~-a~avLVGealmr~~d~~~~~~~l~-~~~~KICGit~~eda~~a~~~-Gad~iGfIf~~~SpR~V~~~~a~~i 299 (452)
T 1pii_A 223 VRELSHF-ANGFLIGSALMAHDDLHAAVRRVL-LGENKVCGLTRGQDAKAAYDA-GAIYGGLIFVATSPRCVNVEQAQEV 299 (452)
T ss_dssp HHHHTTT-CSEEEECHHHHTCSCHHHHHHHHH-HCSCEECCCCSHHHHHHHHHH-TCSEEEEECCTTCTTBCCHHHHHHH
T ss_pred HHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHH-HHhccccCCCcHHHHHHHHhc-CCCEEEeecCCCCCCCCCHHHHHHH
Confidence 9999999 999999999876544443333222 244557778899999999998 9999999843333345788888888
Q ss_pred hhhhcccccccCCceEEEecCCCCHHHHHHHH-HcCCCEEEE
Q 015899 334 LEGERGEIIRQKNIIVVGESGLFTPDDIAYVQ-EAGVKAVLV 374 (398)
Q Consensus 334 ~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~-~~GadaVLV 374 (398)
... ..+..|.--==.+++.+.... .+|.|.|=+
T Consensus 300 ~~~--------~~v~~VgVFvn~~~~~i~~~~~~~~ld~vQL 333 (452)
T 1pii_A 300 MAA--------APLQYVGVFRNHDIADVVDKAKVLSLAAVQL 333 (452)
T ss_dssp HHH--------CCCEEEEEESSCCHHHHHHHHHHHTCSEEEE
T ss_pred Hhc--------CCCCEEEEEeCCCHHHHHHHHHhcCCCEEEE
Confidence 764 123344433345667766654 467777744
No 170
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=96.96 E-value=0.0058 Score=60.88 Aligned_cols=125 Identities=14% Similarity=0.077 Sum_probs=82.7
Q ss_pred HHHHcCcCEEEEeccC--------------CCh----------HHHHHHHHHHHH-cCC-cEEEEcC------------C
Q 015899 256 YARTKGADAVLLIAAV--------------LPD----------LDIRYMTKICKL-LGL-TALVEVH------------D 297 (398)
Q Consensus 256 eAr~~GADaVLLiaai--------------L~~----------~~L~~Li~~a~~-LGL-~~LVEVh------------t 297 (398)
.|.++|+|+|=|.++. .++ .-+.++++..++ +|- .+.|-++ +
T Consensus 169 ~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~ 248 (365)
T 2gou_A 169 NAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADP 248 (365)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSH
T ss_pred HHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCC
Confidence 4567899999997642 111 024455655553 443 4555222 3
Q ss_pred HHH----HHHHhccCCCcEEeeccccCccc-ccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcC-CCE
Q 015899 298 ERE----MDRVLGIEGIELIGINNRNLETF-EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAG-VKA 371 (398)
Q Consensus 298 ~eE----l~rAl~l~Ga~iIGINnRdL~tf-~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~G-ada 371 (398)
.++ ++.+.+. |++.|.+.++.+..- ....+...++.+. .++++|+-||| |++++.++.+.| ||+
T Consensus 249 ~~~~~~~a~~l~~~-G~d~i~v~~~~~~~~~~~~~~~~~~i~~~--------~~iPvi~~Ggi-~~~~a~~~l~~g~aD~ 318 (365)
T 2gou_A 249 ILTYTAAAALLNKH-RIVYLHIAEVDWDDAPDTPVSFKRALREA--------YQGVLIYAGRY-NAEKAEQAINDGLADM 318 (365)
T ss_dssp HHHHHHHHHHHHHT-TCSEEEEECCBTTBCCCCCHHHHHHHHHH--------CCSEEEEESSC-CHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHHHHc-CCCEEEEeCCCcCCCCCccHHHHHHHHHH--------CCCcEEEeCCC-CHHHHHHHHHCCCcce
Confidence 344 3444454 999999987754211 1123333444333 25789999999 999999999998 999
Q ss_pred EEEcccccCCCChHHHHHh
Q 015899 372 VLVGESIVKQDDPGKGITG 390 (398)
Q Consensus 372 VLVGeaLmk~~dp~~~i~~ 390 (398)
|.+|.+++..++....+++
T Consensus 319 V~igR~~i~~P~l~~~~~~ 337 (365)
T 2gou_A 319 IGFGRPFIANPDLPERLRH 337 (365)
T ss_dssp EECCHHHHHCTTHHHHHHH
T ss_pred ehhcHHHHhCchHHHHHHc
Confidence 9999999999998888764
No 171
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=96.95 E-value=0.0022 Score=64.34 Aligned_cols=121 Identities=15% Similarity=0.166 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccC----------CcCCCCHHHHHHHHhcCCCCcEEecc--ccCCHHHHHHHHHcCcCE
Q 015899 197 FDPVEIARSYEKGGAACLSILTDE----------KYFKGSFENLEAVRSAGVKCPLLCKE--FIVDAWQIYYARTKGADA 264 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~----------~~F~Gs~edL~~Ir~a~v~lPVL~KD--FIid~~QI~eAr~~GADa 264 (398)
....+..++.+..||+++-+-.+. .-|.+-.++++.+|+. +++||+.|. |..++.....+..+|||+
T Consensus 155 ~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~-~~~PVivK~vg~g~s~e~A~~l~~aGad~ 233 (365)
T 3sr7_A 155 KPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKK-LQLPFILKEVGFGMDVKTIQTAIDLGVKT 233 (365)
T ss_dssp SCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHH-CCSCEEEEECSSCCCHHHHHHHHHHTCCE
T ss_pred CCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHh-hCCCEEEEECCCCCCHHHHHHHHHcCCCE
Confidence 345678888889999888776543 2244555889999997 899999995 227888888999999999
Q ss_pred EEEecc---CC-----------------ChHHHHHHHHHHHHc--CCcEEEE--cCCHHHHHHHhccCCCcEEeeccccC
Q 015899 265 VLLIAA---VL-----------------PDLDIRYMTKICKLL--GLTALVE--VHDEREMDRVLGIEGIELIGINNRNL 320 (398)
Q Consensus 265 VLLiaa---iL-----------------~~~~L~~Li~~a~~L--GL~~LVE--Vht~eEl~rAl~l~Ga~iIGINnRdL 320 (398)
|.+.-. .+ .......+. .++.+ .+.+++. ++|..++.+++.+ ||+.+++...-+
T Consensus 234 I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~-~v~~~~~~ipvia~GGI~~g~Dv~KaLal-GAdaV~ig~~~l 311 (365)
T 3sr7_A 234 VDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLL-NAQPLMDKVEILASGGIRHPLDIIKALVL-GAKAVGLSRTML 311 (365)
T ss_dssp EECCCBC--------------CGGGTTCSCBHHHHHH-HHGGGTTTSEEEECSSCCSHHHHHHHHHH-TCSEEEESHHHH
T ss_pred EEEeCCCCcccchhhccccccccccccccccHHHHHH-HHHHhcCCCeEEEeCCCCCHHHHHHHHHc-CCCEEEECHHHH
Confidence 998432 11 111122333 34444 5667775 6899999999998 999999985444
No 172
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=96.93 E-value=0.0064 Score=60.72 Aligned_cols=89 Identities=16% Similarity=0.181 Sum_probs=72.0
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEE
Q 015899 272 LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVG 351 (398)
Q Consensus 272 L~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVA 351 (398)
|+.+.++.|.++|+++||.++.|+.|.+.++.+.++ +++++=|-.+|+++| ....++.+ .+.++|-
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~-~v~~~KI~S~~~~n~----~LL~~va~---------~gkPviL 153 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFISTLFSRAAALRLQRM-DIPAYKIGSGECNNY----PLIKLVAS---------FGKPIIL 153 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHH-TCSCEEECGGGTTCH----HHHHHHHT---------TCSCEEE
T ss_pred CCHHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhc-CCCEEEECcccccCH----HHHHHHHh---------cCCeEEE
Confidence 677889999999999999999999999999999887 899999999998754 33334433 4678888
Q ss_pred ecCCCCHHHHHHH----HHcCCCEEEE
Q 015899 352 ESGLFTPDDIAYV----QEAGVKAVLV 374 (398)
Q Consensus 352 ESGI~t~eD~~~l----~~~GadaVLV 374 (398)
.-|..|.+++... ++.|.+=+|.
T Consensus 154 stGmat~~Ei~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 154 STGMNSIESIKKSVEIIREAGVPYALL 180 (349)
T ss_dssp ECTTCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 9999999987654 4567765554
No 173
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=96.92 E-value=0.0056 Score=61.36 Aligned_cols=118 Identities=15% Similarity=0.144 Sum_probs=82.3
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEec-------
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIA------- 269 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLia------- 269 (398)
+-.+.++.+.+.|+++|.+.+-...-....+.++.+|+. + ++||+.++ +.++.++..+..+|||+|.+..
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~-~~~~pviv~~-v~~~~~a~~a~~~Gad~I~vg~~~G~~~~ 230 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK-YPNLDLIAGN-IVTKEAALDLISVGADCLKVGIGPGSICT 230 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH-CTTCEEEEEE-ECSHHHHHHHHTTTCSEEEECSSCSTTSH
T ss_pred hHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH-CCCCeEEEcC-CCcHHHHHHHHhcCCCEEEECCCCCcCcC
Confidence 456778888899999999843211111125667778886 6 89999754 5677888888999999999821
Q ss_pred ----cCCChHH---HHHHHHHHHHcCCcEEE--EcCCHHHHHHHhccCCCcEEeeccc
Q 015899 270 ----AVLPDLD---IRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNR 318 (398)
Q Consensus 270 ----aiL~~~~---L~~Li~~a~~LGL~~LV--EVht~eEl~rAl~l~Ga~iIGINnR 318 (398)
.-....+ +.++.+.+...++.++. -++|.+++.+++.+ ||+.+++...
T Consensus 231 ~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~-GAd~V~iG~~ 287 (404)
T 1eep_A 231 TRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAA-GADSVMIGNL 287 (404)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHH-TCSEEEECHH
T ss_pred ccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHc-CCCHHhhCHH
Confidence 1111112 34444433356888888 68999999999998 9999999643
No 174
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=96.90 E-value=0.0027 Score=58.55 Aligned_cols=94 Identities=17% Similarity=0.160 Sum_probs=71.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCcEEEEec---cCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHc---Cc
Q 015899 189 SRGILREDFDPVEIARSYEKGGAACLSILT---DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK---GA 262 (398)
Q Consensus 189 SkG~i~~~~dp~~iA~aY~~~GA~aISVLT---d~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~---GA 262 (398)
.+|+.....++.+.++.+++.|+..|-+.+ +..+++-+++.++.+++. +++||+.-..|.++..+.+++.+ ||
T Consensus 138 ~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~-~~ipvia~GGI~~~~d~~~~~~~~~~Ga 216 (244)
T 1vzw_A 138 GRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAA-TDRPVVASGGVSSLDDLRAIAGLVPAGV 216 (244)
T ss_dssp CSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC-------CCCHHHHHHHHHT-CSSCEEEESCCCSHHHHHHHHTTGGGTE
T ss_pred EcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHhhccCCC
Confidence 345554444899999999999999887754 122233368899999986 89999999888889999999998 99
Q ss_pred CEEEEeccCCChH-HHHHHHHH
Q 015899 263 DAVLLIAAVLPDL-DIRYMTKI 283 (398)
Q Consensus 263 DaVLLiaaiL~~~-~L~~Li~~ 283 (398)
|+|+++.+++... .++++.++
T Consensus 217 dgv~vG~al~~~~~~~~~~~~~ 238 (244)
T 1vzw_A 217 EGAIVGKALYAKAFTLEEALEA 238 (244)
T ss_dssp EEEEECHHHHTTSSCHHHHHHH
T ss_pred ceeeeeHHHHcCCCCHHHHHHH
Confidence 9999998887543 46666554
No 175
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=96.84 E-value=0.0064 Score=60.40 Aligned_cols=130 Identities=15% Similarity=0.070 Sum_probs=85.9
Q ss_pred HHHHHcCcCEEEEeccC--------------CCh------H----HHHHHHHHHHH-cC--CcEEEEcC----------C
Q 015899 255 YYARTKGADAVLLIAAV--------------LPD------L----DIRYMTKICKL-LG--LTALVEVH----------D 297 (398)
Q Consensus 255 ~eAr~~GADaVLLiaai--------------L~~------~----~L~~Li~~a~~-LG--L~~LVEVh----------t 297 (398)
..|..+|.|+|=|.++- .+| + -+.+.++..++ .| ..+.|-++ +
T Consensus 165 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~ 244 (363)
T 3l5l_A 165 RRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQT 244 (363)
T ss_dssp HHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHH
T ss_pred HHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCC
Confidence 35667899999998751 111 1 13455555553 44 34555442 2
Q ss_pred HHH----HHHHhccCCCcEEeeccccCcc-----c--ccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHH
Q 015899 298 ERE----MDRVLGIEGIELIGINNRNLET-----F--EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQE 366 (398)
Q Consensus 298 ~eE----l~rAl~l~Ga~iIGINnRdL~t-----f--~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~ 366 (398)
.+| ++...++ |+++|-+.+..... . ..+++...++.+. .++++++-|||.|++++.++.+
T Consensus 245 ~~~~~~la~~L~~~-Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~--------~~iPVi~~GgI~s~e~a~~~l~ 315 (363)
T 3l5l_A 245 LEESIELARRFKAG-GLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRRE--------AKLPVTSAWGFGTPQLAEAALQ 315 (363)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH--------HTCCEEECSSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCCEEEEecCccccccccCCCcchhHHHHHHHHHH--------cCCcEEEeCCCCCHHHHHHHHH
Confidence 333 2233343 89999887643321 0 1233444444433 2578999999999999999999
Q ss_pred cC-CCEEEEcccccCCCChHHHHHhhhc
Q 015899 367 AG-VKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 367 ~G-adaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
.| ||.|.+|.+++..+|....+++-++
T Consensus 316 ~G~aD~V~iGR~~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 316 ANQLDLVSVGRAHLADPHWAYFAAKELG 343 (363)
T ss_dssp TTSCSEEECCHHHHHCTTHHHHHHHHTT
T ss_pred CCCccEEEecHHHHhCchHHHHHHHHcC
Confidence 99 9999999999999998888887766
No 176
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=96.80 E-value=0.0013 Score=62.41 Aligned_cols=136 Identities=7% Similarity=0.008 Sum_probs=88.0
Q ss_pred CCHHHHHHHHHcCcCEEEEecc----CC--ChHHHHHHHHHHHHcCCcEEEEcCC-HHHHHHH------------hcc--
Q 015899 249 VDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHD-EREMDRV------------LGI-- 307 (398)
Q Consensus 249 id~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~~LVEVht-~eEl~rA------------l~l-- 307 (398)
+.+.++ +.+||+.|+|+.+ .+ +++.+..=++.|.+.||.++++|.. ++|-+.= ..+
T Consensus 72 iS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~~~t~~vv~~Ql~~l~~ 148 (233)
T 2jgq_A 72 ITSKHL---EELKIHTLLIGHSERRTLLKESPSFLKEKFDFFKSKNFKIVYCIGEELTTREKGFKAVKEFLSEQLENIDL 148 (233)
T ss_dssp CBHHHH---HHTTCCEEEECCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHCHHHHHHHHHHHHTTSCT
T ss_pred cCHHHH---HHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCchhHHHHHHHHHHhhhh
Confidence 455554 4579999999998 23 4566788888899999999999974 4432220 001
Q ss_pred C-CCcEEeeccc-cC-cccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCCh
Q 015899 308 E-GIELIGINNR-NL-ETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDP 384 (398)
Q Consensus 308 ~-Ga~iIGINnR-dL-~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp 384 (398)
+ ...+|..-.. -. +.-.-+.+...+....+|.- +. ..+.++..|+++..++...+...++||+|||.+-+++++.
T Consensus 149 ~~~~~vIAYEPvWAIGTG~~At~e~a~ev~~~IR~~-l~-~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsl~a~~f 226 (233)
T 2jgq_A 149 NYPNLVVAYEPIWAIGTKKSASLEDIYLTHGFLKQI-LN-QKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASWELENF 226 (233)
T ss_dssp TCTTEEEEECCGGGTTC--CCCHHHHHHHHHHHHHH-SC-TTSCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGSHHHH
T ss_pred hccceEEEEeCHHHhCCCCCCCHHHHHHHHHHHHHH-Hh-cCCcEEEcCCcChhhHHHHhcCCCCCeeEecHHHhChHHH
Confidence 0 1112322110 00 01123455566655554431 21 3578999999988888888889999999999999998887
Q ss_pred HHHHH
Q 015899 385 GKGIT 389 (398)
Q Consensus 385 ~~~i~ 389 (398)
.+.++
T Consensus 227 ~~ii~ 231 (233)
T 2jgq_A 227 KTIIS 231 (233)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 76654
No 177
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=96.76 E-value=0.028 Score=56.11 Aligned_cols=182 Identities=13% Similarity=0.027 Sum_probs=118.8
Q ss_pred CceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEec-----cCCcCCC-CHHHHH---HHHhcCCCCcEEecc
Q 015899 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT-----DEKYFKG-SFENLE---AVRSAGVKCPLLCKE 246 (398)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLT-----d~~~F~G-s~edL~---~Ir~a~v~lPVL~KD 246 (398)
++.||||. |.+....-..++|+...++||.++..-+ -+..|+| +.+.|+ .+++. ..+|+++-=
T Consensus 106 ~~~vIAgp-------cs~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e-~Gl~~~te~ 177 (350)
T 1vr6_A 106 YFTIIAGP-------CSVEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADK-YGMYVVTEA 177 (350)
T ss_dssp EEEEEEEC-------SBCCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHH-HTCEEEEEC
T ss_pred CeEEEEeC-------CCcCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHH-cCCcEEEEe
Confidence 57899998 3344444567889999999999987653 3335666 344444 44544 689999843
Q ss_pred ccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHHHHhcc---CCC-cEEe----e
Q 015899 247 FIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLGI---EGI-ELIG----I 315 (398)
Q Consensus 247 FIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~rAl~l---~Ga-~iIG----I 315 (398)
.|+.++..+... +|.+-+.+..+.+.+ |++.+..+|..+++... |.+|+..|++. .|. +++= +
T Consensus 178 --~d~~~~~~l~~~-vd~lkIgAr~~~n~~---LL~~va~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~ 251 (350)
T 1vr6_A 178 --LGEDDLPKVAEY-ADIIQIGARNAQNFR---LLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGI 251 (350)
T ss_dssp --SSGGGHHHHHHH-CSEEEECGGGTTCHH---HHHHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred --CCHHHHHHHHHh-CCEEEECcccccCHH---HHHHHHccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCC
Confidence 599999888888 999999998887743 34444478999999874 66888887752 244 4433 3
Q ss_pred ccc-cCcccccChhhHHHHhhhhcccccccCCceEEE-ec---CCCC--HHHHHHHHHcCCCEEEEccccc
Q 015899 316 NNR-NLETFEVDNSNTKKLLEGERGEIIRQKNIIVVG-ES---GLFT--PDDIAYVQEAGVKAVLVGESIV 379 (398)
Q Consensus 316 NnR-dL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVA-ES---GI~t--~eD~~~l~~~GadaVLVGeaLm 379 (398)
.++ ++....+|+.....|.+. .+++++. .| |-+. +.-......+||+|++|-.-+.
T Consensus 252 ~typ~~~~~~vdl~ai~~lk~~--------~~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~ 314 (350)
T 1vr6_A 252 RTFEKATRNTLDISAVPIIRKE--------SHLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPE 314 (350)
T ss_dssp CCSCCSSSSBCCTTHHHHHHHH--------BSSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSC
T ss_pred CCCCCcChhhhhHHHHHHHHHh--------hCCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCC
Confidence 233 344456677665555442 2445533 33 4332 3334444568999999987764
No 178
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=96.76 E-value=0.0057 Score=63.28 Aligned_cols=122 Identities=15% Similarity=0.069 Sum_probs=93.0
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCC-CcEEeccccCCHHHHHHHHHcCcCEEEEeccC----
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIAAV---- 271 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~-lPVL~KDFIid~~QI~eAr~~GADaVLLiaai---- 271 (398)
.+..+.++.+.+.|+..+.|-+..++..|..+.++.+++...+ +||+.++ +.+..+...+..+|||+|.+...-
T Consensus 241 ~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~~~~~Vi~G~-V~t~~~a~~l~~aGad~I~Vg~~~g~~~ 319 (503)
T 1me8_A 241 RDFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGN-IVDGEGFRYLADAGADFIKIGIGGGSIC 319 (503)
T ss_dssp SSHHHHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHHGGGSCEEEEE-ECSHHHHHHHHHHTCSEEEECSSCSTTC
T ss_pred hhHHHHHHHHHhhhccceEEecccCcccchhhHHHHHHHhCCCCceEeecc-ccCHHHHHHHHHhCCCeEEecccCCcCc
Confidence 5667778888888999998877666666677888888875225 8999776 477788889999999999875411
Q ss_pred ---------CCh-HHHHHHHHHHHHc------CCcEEE--EcCCHHHHHHHhccCCCcEEeeccccC
Q 015899 272 ---------LPD-LDIRYMTKICKLL------GLTALV--EVHDEREMDRVLGIEGIELIGINNRNL 320 (398)
Q Consensus 272 ---------L~~-~~L~~Li~~a~~L------GL~~LV--EVht~eEl~rAl~l~Ga~iIGINnRdL 320 (398)
.+. .-+.+..+.++.. ++.++. -+++..|+.+|+.+ ||+.+++..+=+
T Consensus 320 ~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlal-GA~~V~iG~~~~ 385 (503)
T 1me8_A 320 ITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAM-GADFIMLGRYFA 385 (503)
T ss_dssp CSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHT-TCSEEEESHHHH
T ss_pred ccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHc-CCCEEEECchhh
Confidence 122 2245555555655 899999 79999999999998 999999985543
No 179
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=96.75 E-value=0.052 Score=51.26 Aligned_cols=155 Identities=14% Similarity=0.134 Sum_probs=95.5
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhc--CC-CCcEEe-ccccC----CH---HHHHHHHHcCcCE
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GV-KCPLLC-KEFIV----DA---WQIYYARTKGADA 264 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a--~v-~lPVL~-KDFIi----d~---~QI~eAr~~GADa 264 (398)
..++.+++....++|++++-| ++..+ .+++. +. ++.|-. =+|-. .. +++.+|...|||.
T Consensus 35 ~~~i~~l~~~a~~~~~~aVcv---------~p~~v-~a~~~l~~~~~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdE 104 (234)
T 1n7k_A 35 EEDVRNLVREASDYGFRCAVL---------TPVYT-VKISGLAEKLGVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATE 104 (234)
T ss_dssp HHHHHHHHHHHHHHTCSEEEE---------CHHHH-HHHHHHHHHHTCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHhCCCEEEE---------chHHh-eeehHhCCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 446667777788889999887 44455 44331 11 333321 13311 11 5788999999999
Q ss_pred EEEeccC--C-C--hHHHHHHHHHHHHcCCcE--EEEcC--CHHHHHHHh----ccCCCcEEeeccccCcc-cccChhhH
Q 015899 265 VLLIAAV--L-P--DLDIRYMTKICKLLGLTA--LVEVH--DEREMDRVL----GIEGIELIGINNRNLET-FEVDNSNT 330 (398)
Q Consensus 265 VLLiaai--L-~--~~~L~~Li~~a~~LGL~~--LVEVh--t~eEl~rAl----~l~Ga~iIGINnRdL~t-f~vDl~~t 330 (398)
|-+..-+ + + -+++..+.+.|+..|+.+ ++|.. +.+++.++. ++ |+++|=+.. .+.+ -..+++..
T Consensus 105 ID~vinig~~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i~~a~ria~ea-GADfVKTsT-G~~~~~gAt~~dv 182 (234)
T 1n7k_A 105 LDVVPHLSLGPEAVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTLSLLVDSSRRA-GADIVKTST-GVYTKGGDPVTVF 182 (234)
T ss_dssp EEECCCGGGCHHHHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHHHHHHHHHHHT-TCSEEESCC-SSSCCCCSHHHHH
T ss_pred EEEeccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHHHHHHHHHHHh-CCCEEEeCC-CCCCCCCCCHHHH
Confidence 9764322 2 2 235666677777767654 77764 566666554 44 999987762 1111 11122222
Q ss_pred HH--HhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCC
Q 015899 331 KK--LLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVK 370 (398)
Q Consensus 331 ~~--L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gad 370 (398)
.- +.+. + . +.+.+.|||+|.+|+..+.++|++
T Consensus 183 ~l~~m~~~-----v--~-v~VKaaGGirt~~~al~~i~aGa~ 216 (234)
T 1n7k_A 183 RLASLAKP-----L--G-MGVKASGGIRSGIDAVLAVGAGAD 216 (234)
T ss_dssp HHHHHHGG-----G--T-CEEEEESSCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHH-----H--C-CCEEEecCCCCHHHHHHHHHcCcc
Confidence 22 3322 2 2 789999999999999999999999
No 180
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=96.74 E-value=0.015 Score=58.14 Aligned_cols=93 Identities=19% Similarity=0.243 Sum_probs=74.3
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEE
Q 015899 272 LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVG 351 (398)
Q Consensus 272 L~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVA 351 (398)
|+.++++.|.++|++.||.++.++-|.+.++...++ |++++=|..+|+++| ...+++.+ .+.++|-
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD~~svd~l~~~-~v~~~KI~S~~~~N~----pLL~~va~---------~gKPviL 140 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFDEESVDLIEAH-GIEIIKIASCSFTDW----PLLERIAR---------SDKPVVA 140 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHT-TCCEEEECSSSTTCH----HHHHHHHT---------SCSCEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCCHHHHHHHHHc-CCCEEEECcccccCH----HHHHHHHh---------hCCcEEE
Confidence 777889999999999999999999999999999997 999999999998654 33334432 4678888
Q ss_pred ecCCCCHHHHHHH----HHcCCCEEEE--ccccc
Q 015899 352 ESGLFTPDDIAYV----QEAGVKAVLV--GESIV 379 (398)
Q Consensus 352 ESGI~t~eD~~~l----~~~GadaVLV--GeaLm 379 (398)
.-|..|.+++... ++.|.+ |++ .++-+
T Consensus 141 stGmstl~Ei~~Ave~i~~~g~~-viLlhC~s~Y 173 (350)
T 3g8r_A 141 STAGARREDIDKVVSFMLHRGKD-LTIMHCVAEY 173 (350)
T ss_dssp ECTTCCHHHHHHHHHHHHTTTCC-EEEEECCCCS
T ss_pred ECCCCCHHHHHHHHHHHHHcCCC-EEEEecCCCC
Confidence 9999999998765 445776 444 55444
No 181
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=96.74 E-value=0.034 Score=53.71 Aligned_cols=181 Identities=19% Similarity=0.171 Sum_probs=119.5
Q ss_pred CceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEecc-----CCcCCC-CHHHHHHH---HhcCCCCcEEecc
Q 015899 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTD-----EKYFKG-SFENLEAV---RSAGVKCPLLCKE 246 (398)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd-----~~~F~G-s~edL~~I---r~a~v~lPVL~KD 246 (398)
++.||||.= .+....-..++|+...++||.++..-+. +..|+| +.+.++.+ ++. ..+|++.-=
T Consensus 38 ~~~vIAgpc-------~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~-~Gl~~~te~ 109 (276)
T 1vs1_A 38 SKAVIAGPC-------SVESWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDE-AGLPVVTEV 109 (276)
T ss_dssp BCEEEEECS-------BCCCHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH-HTCCEEEEC
T ss_pred CeEEEEecC-------CCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHH-cCCcEEEec
Confidence 578999982 3334445677899999999999876533 334666 34445444 444 689999754
Q ss_pred ccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHHHHhcc---CCC-cEE----ee
Q 015899 247 FIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLGI---EGI-ELI----GI 315 (398)
Q Consensus 247 FIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~rAl~l---~Ga-~iI----GI 315 (398)
.|+.++..+... +|.+-+.+..+.+.+ |++.+..+|+.+++... |.+|+..|++. .|. +++ |+
T Consensus 110 --~d~~~~~~l~~~-vd~~kIgs~~~~n~~---ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~ 183 (276)
T 1vs1_A 110 --LDPRHVETVSRY-ADMLQIGARNMQNFP---LLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGI 183 (276)
T ss_dssp --CCGGGHHHHHHH-CSEEEECGGGTTCHH---HHHHHHHHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred --CCHHHHHHHHHh-CCeEEECcccccCHH---HHHHHHccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 589999888888 999999998887743 34445578999998874 66998888753 244 332 44
Q ss_pred ccc-cCcccccChhhHHHHhhhhcccccccCCceEEE-ec---CCCC--HHHHHHHHHcCCCEEEEcccc
Q 015899 316 NNR-NLETFEVDNSNTKKLLEGERGEIIRQKNIIVVG-ES---GLFT--PDDIAYVQEAGVKAVLVGESI 378 (398)
Q Consensus 316 NnR-dL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVA-ES---GI~t--~eD~~~l~~~GadaVLVGeaL 378 (398)
.+. ++....+|+.....|.+. .+++|+. .+ |.+. +.-......+|++|++|-+-+
T Consensus 184 ~~yp~y~~~~vdl~~i~~lk~~--------~~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 184 RTFEPSTRFTLDVAAVAVLKEA--------THLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp CCSCCSSSSBCBHHHHHHHHHH--------BSSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CCCCCcCcchhCHHHHHHHHHH--------hCCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 343 445556777765555442 2445542 33 4332 333444466899999998876
No 182
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=96.73 E-value=0.0086 Score=60.57 Aligned_cols=89 Identities=15% Similarity=0.126 Sum_probs=72.0
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEE
Q 015899 272 LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVG 351 (398)
Q Consensus 272 L~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVA 351 (398)
|+.++++.|.++|+++||.++.++.|.+.++...++ +++++=|-.+|+++| ....++.+ .+.++|-
T Consensus 98 l~~e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~-~vd~~KIgS~~~~N~----pLL~~va~---------~gKPViL 163 (385)
T 1vli_A 98 MPAEWILPLLDYCREKQVIFLSTVCDEGSADLLQST-SPSAFKIASYEINHL----PLLKYVAR---------LNRPMIF 163 (385)
T ss_dssp SCGGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTT-CCSCEEECGGGTTCH----HHHHHHHT---------TCSCEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhc-CCCEEEECcccccCH----HHHHHHHh---------cCCeEEE
Confidence 677889999999999999999999999999999897 899999999998754 33344433 4678889
Q ss_pred ecCCCCHHHHHHH----HHcCCCEEEE
Q 015899 352 ESGLFTPDDIAYV----QEAGVKAVLV 374 (398)
Q Consensus 352 ESGI~t~eD~~~l----~~~GadaVLV 374 (398)
.-|..|.+++... ++.|..-|++
T Consensus 164 StGmaTl~Ei~~Ave~i~~~Gn~~iiL 190 (385)
T 1vli_A 164 STAGAEISDVHEAWRTIRAEGNNQIAI 190 (385)
T ss_dssp ECTTCCHHHHHHHHHHHHTTTCCCEEE
T ss_pred ECCCCCHHHHHHHHHHHHHCCCCcEEE
Confidence 9999999997654 4568744444
No 183
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=96.70 E-value=0.0025 Score=60.73 Aligned_cols=76 Identities=25% Similarity=0.306 Sum_probs=61.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEec-------cC-----------CcCCCC------HHHHHHHHhcCCCCcEEeccccCCHH
Q 015899 197 FDPVEIARSYEKGGAACLSILT-------DE-----------KYFKGS------FENLEAVRSAGVKCPLLCKEFIVDAW 252 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLT-------d~-----------~~F~Gs------~edL~~Ir~a~v~lPVL~KDFIid~~ 252 (398)
.++.++|+.+++.|+++|.|-. +. ..|.|. ++.+..+++. +++||+.-..|.++.
T Consensus 176 ~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~-~~ipvia~GGI~~~~ 254 (311)
T 1ep3_A 176 TDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQD-VDIPIIGMGGVANAQ 254 (311)
T ss_dssp SCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTT-CSSCEEECSSCCSHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHh-cCCCEEEECCcCCHH
Confidence 3678999999999999999931 11 112332 4778888886 899999998889999
Q ss_pred HHHHHHHcCcCEEEEeccCCC
Q 015899 253 QIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 253 QI~eAr~~GADaVLLiaaiL~ 273 (398)
++.++..+|||+|.+..+++.
T Consensus 255 d~~~~l~~GAd~V~vg~~~l~ 275 (311)
T 1ep3_A 255 DVLEMYMAGASAVAVGTANFA 275 (311)
T ss_dssp HHHHHHHHTCSEEEECTHHHH
T ss_pred HHHHHHHcCCCEEEECHHHHc
Confidence 999999999999999888774
No 184
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=96.69 E-value=0.0075 Score=56.64 Aligned_cols=185 Identities=14% Similarity=0.122 Sum_probs=105.1
Q ss_pred CHHHHHHHHHHcCC--cEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE--eccccCCHH---HHHHHHHcCcCEEEEecc
Q 015899 198 DPVEIARSYEKGGA--ACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--CKEFIVDAW---QIYYARTKGADAVLLIAA 270 (398)
Q Consensus 198 dp~~iA~aY~~~GA--~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL--~KDFIid~~---QI~eAr~~GADaVLLiaa 270 (398)
+..+..+..++.|+ .++=+-+|= |+.-++.-++.+|+. +.+|+ .|=.-++.. -++.+..+|||+|-+-+.
T Consensus 15 ~l~~~~~~v~~~~~~v~~~Kv~~d~-~~~~G~~~v~~lr~~--~~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vTvH~~ 91 (246)
T 2yyu_A 15 SKQEVERFLRPFAGTPLFVKVGMEL-YYQEGPAIVAFLKEQ--GHAVFLDLKLHDIPNTVKQAMKGLARVGADLVNVHAA 91 (246)
T ss_dssp SHHHHHHHHGGGTTSCCEEEECHHH-HHHHTHHHHHHHHHT--TCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGG
T ss_pred CHHHHHHHHHHhcccccEEEeCHHH-HHHhCHHHHHHHHHC--CCeEEEEeecccchHHHHHHHHHHHhcCCCEEEEECC
Confidence 56666666667774 553343332 555577888999875 34443 222213333 466778899999999765
Q ss_pred CCChHHHHHHHHHHHH---cCCc-E-EEEc--CC---HHHH-HHH-hccCCCcEE---eeccc--cCcccccChhhHHHH
Q 015899 271 VLPDLDIRYMTKICKL---LGLT-A-LVEV--HD---EREM-DRV-LGIEGIELI---GINNR--NLETFEVDNSNTKKL 333 (398)
Q Consensus 271 iL~~~~L~~Li~~a~~---LGL~-~-LVEV--ht---~eEl-~rA-l~l~Ga~iI---GINnR--dL~tf~vDl~~t~~L 333 (398)
. ....+..+++.+++ .|+. + ++-| .| .+++ +.. ....-.++| +.++. ....|-.......++
T Consensus 92 ~-g~~~l~~~~~~~~~~~~~G~~~~~~lav~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~~ei~~l 170 (246)
T 2yyu_A 92 G-GRRMMEAAIEGLDAGTPSGRMRPRCIAVTQLTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCSANEAAFI 170 (246)
T ss_dssp G-CHHHHHHHHHHHHHHSCSSSCCCEEEEESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECCHHHHHHH
T ss_pred C-CHHHHHHHHHHHHhhcccCCcCCCEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeCHHHHHHH
Confidence 4 44447889998888 7853 2 3332 22 2444 221 000000111 11111 112222222223333
Q ss_pred hhhhcccccccCCceEEEecCCCCH-H---------HHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 334 LEGERGEIIRQKNIIVVGESGLFTP-D---------DIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 334 ~~~i~~~~i~~~~v~vVAESGI~t~-e---------D~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
.+. . +.. +++.-+||+-. . .+..+.++|+|.++||++|++++||.++++++..
T Consensus 171 r~~-----~-~~~-~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~ 233 (246)
T 2yyu_A 171 KER-----C-GAS-FLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRAADPLRTYARLQH 233 (246)
T ss_dssp HHH-----H-CTT-SEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred HHh-----c-CCC-CEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCCCCHHHHHHHHHH
Confidence 332 1 223 36667999532 0 4667788999999999999999999999988854
No 185
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=96.69 E-value=0.018 Score=57.73 Aligned_cols=125 Identities=12% Similarity=0.026 Sum_probs=81.4
Q ss_pred HHHHcCcCEEEEeccC--------------CCh-------H---HHHHHHHHHHH-cCC-cEEEEcC------------C
Q 015899 256 YARTKGADAVLLIAAV--------------LPD-------L---DIRYMTKICKL-LGL-TALVEVH------------D 297 (398)
Q Consensus 256 eAr~~GADaVLLiaai--------------L~~-------~---~L~~Li~~a~~-LGL-~~LVEVh------------t 297 (398)
.|.++|+|+|=|.++- .+| . -+.++++..++ .|- .+.|-++ +
T Consensus 174 ~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~ 253 (377)
T 2r14_A 174 RAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEP 253 (377)
T ss_dssp HHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCH
T ss_pred HHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCC
Confidence 4467899999997652 111 1 14455555553 453 5666543 1
Q ss_pred HHH----HHHHhccCCCcEEeeccccCcccc--cChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcC-CC
Q 015899 298 ERE----MDRVLGIEGIELIGINNRNLETFE--VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAG-VK 370 (398)
Q Consensus 298 ~eE----l~rAl~l~Ga~iIGINnRdL~tf~--vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~G-ad 370 (398)
.++ ++.+.+. |++.|-+.++...... .+.+...++.+. .++++|+-||| +++++.++.+.| ||
T Consensus 254 ~~~~~~la~~le~~-Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~--------~~iPvi~~Ggi-~~~~a~~~l~~g~aD 323 (377)
T 2r14_A 254 EAMAFYLAGELDRR-GLAYLHFNEPDWIGGDITYPEGFREQMRQR--------FKGGLIYCGNY-DAGRAQARLDDNTAD 323 (377)
T ss_dssp HHHHHHHHHHHHHT-TCSEEEEECCC------CCCTTHHHHHHHH--------CCSEEEEESSC-CHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHc-CCCEEEEeCCcccCCCCcchHHHHHHHHHH--------CCCCEEEECCC-CHHHHHHHHHCCCce
Confidence 233 2333344 8999988776432211 134444455443 25789999999 799999999998 99
Q ss_pred EEEEcccccCCCChHHHHHh
Q 015899 371 AVLVGESIVKQDDPGKGITG 390 (398)
Q Consensus 371 aVLVGeaLmk~~dp~~~i~~ 390 (398)
+|.+|.+++..+|....+++
T Consensus 324 ~V~igR~~l~~P~l~~k~~~ 343 (377)
T 2r14_A 324 AVAFGRPFIANPDLPERFRL 343 (377)
T ss_dssp EEEESHHHHHCTTHHHHHHH
T ss_pred EEeecHHHHhCchHHHHHHc
Confidence 99999999999998887764
No 186
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=96.63 E-value=0.015 Score=58.63 Aligned_cols=108 Identities=18% Similarity=0.239 Sum_probs=82.8
Q ss_pred HHHHHHcCcCEEEEeccC----------CChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCccc
Q 015899 254 IYYARTKGADAVLLIAAV----------LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETF 323 (398)
Q Consensus 254 I~eAr~~GADaVLLiaai----------L~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf 323 (398)
+..++.+|||+|-..+-- ++.+.++.|.++|+++||.++.|+++.+.++.+.++ ++++-|..++.+.+
T Consensus 162 a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~--vd~lkIgs~~~~n~ 239 (385)
T 3nvt_A 162 AESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDY--VDVIQIGARNMQNF 239 (385)
T ss_dssp HHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTT--CSEEEECGGGTTCH
T ss_pred HHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhh--CCEEEECcccccCH
Confidence 446678999988776521 556779999999999999999999999999999885 89999999988764
Q ss_pred ccChhhHHHHhhhhcccccccCCceEEEecCC-CCHHHHHH----HHHcCCCEEEEcc
Q 015899 324 EVDNSNTKKLLEGERGEIIRQKNIIVVGESGL-FTPDDIAY----VQEAGVKAVLVGE 376 (398)
Q Consensus 324 ~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI-~t~eD~~~----l~~~GadaVLVGe 376 (398)
.....+.+ .+.+|+..-|. .|++++.. +.+.|..-+++-+
T Consensus 240 ----~LL~~~a~---------~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~ 284 (385)
T 3nvt_A 240 ----ELLKAAGR---------VDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCE 284 (385)
T ss_dssp ----HHHHHHHT---------SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred ----HHHHHHHc---------cCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEE
Confidence 22222222 46788888888 89998854 4566886666633
No 187
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=96.61 E-value=0.031 Score=53.76 Aligned_cols=159 Identities=15% Similarity=0.124 Sum_probs=95.9
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhc--CCCCcEEe-ccccC--CH-----HHHHHHHHcCcCEEE
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLC-KEFIV--DA-----WQIYYARTKGADAVL 266 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a--~v~lPVL~-KDFIi--d~-----~QI~eAr~~GADaVL 266 (398)
.++.+++....+.|++++-| ++..+..+++. +.++.|-. =+|-. ++ +++.+|...|||.|-
T Consensus 59 ~~I~~lc~eA~~~~~aaVCV---------~p~~V~~a~~~L~gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEID 129 (260)
T 3r12_A 59 DDIKKLCLEARENRFHGVCV---------NPCYVKLAREELEGTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADEID 129 (260)
T ss_dssp HHHHHHHHHHHHTTCSEEEE---------CGGGHHHHHHHHTTSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHhcCCcEEEE---------CHHHHHHHHHHhcCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEE
Confidence 35566677777889998888 33345555432 23444321 14421 11 367788899999987
Q ss_pred EeccC---CC--h----HHHHHHHHHHHHcCCcEEEEcC--CHHHHHHHhcc---CCCcEEeeccccCcccccChhhHHH
Q 015899 267 LIAAV---LP--D----LDIRYMTKICKLLGLTALVEVH--DEREMDRVLGI---EGIELIGINNRNLETFEVDNSNTKK 332 (398)
Q Consensus 267 Liaai---L~--~----~~L~~Li~~a~~LGL~~LVEVh--t~eEl~rAl~l---~Ga~iIGINnRdL~tf~vDl~~t~~ 332 (398)
+..-+ ++ . +++..+.+.|...-|.+++|.. |.+|+.+|..+ .||++|=++ ..+.+-...++...-
T Consensus 130 mViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTS-TGf~~~GAT~edV~l 208 (260)
T 3r12_A 130 MVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTS-TGFGTGGATAEDVHL 208 (260)
T ss_dssp EECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECC-CSSSSCCCCHHHHHH
T ss_pred EEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcC-CCCCCCCCCHHHHHH
Confidence 64442 22 1 2344444444434467788886 77777766432 399998766 112111222333222
Q ss_pred HhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCE
Q 015899 333 LLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKA 371 (398)
Q Consensus 333 L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gada 371 (398)
+.+. ....+.+-+.|||+|.+|+..+.++||+.
T Consensus 209 m~~~------vg~~v~VKaAGGIrt~~~al~mi~aGA~R 241 (260)
T 3r12_A 209 MKWI------VGDEMGVKASGGIRTFEDAVKMIMYGADR 241 (260)
T ss_dssp HHHH------HCTTSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHHH------hCCCceEEEeCCCCCHHHHHHHHHcCCce
Confidence 2222 12468899999999999999999999994
No 188
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=96.61 E-value=0.016 Score=53.40 Aligned_cols=147 Identities=13% Similarity=0.099 Sum_probs=90.4
Q ss_pred HHHcCCcEEEEeccCCcCCCCHH-HHHHHHhcCCCCcEEeccc----cCCHHHHHHHHH-cCcCEEEEeccCCChHHHHH
Q 015899 206 YEKGGAACLSILTDEKYFKGSFE-NLEAVRSAGVKCPLLCKEF----IVDAWQIYYART-KGADAVLLIAAVLPDLDIRY 279 (398)
Q Consensus 206 Y~~~GA~aISVLTd~~~F~Gs~e-dL~~Ir~a~v~lPVL~KDF----Iid~~QI~eAr~-~GADaVLLiaaiL~~~~L~~ 279 (398)
+.+..+..+-+|+-.= ++++ .+..++++ ...|++.-|. --|.+-+.-... .++|+|+= + =..
T Consensus 25 al~s~~~~ifll~g~i---~~l~~~v~~lk~~-~K~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIs--T------k~~ 92 (192)
T 3kts_A 25 ILELDLTYMVMLETHV---AQLKALVKYAQAG-GKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIIS--T------RGN 92 (192)
T ss_dssp HTTSSCCEEEECSEET---TTHHHHHHHHHHT-TCEEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEE--S------CHH
T ss_pred HHcCCCCEEEEecCcH---HHHHHHHHHHHHc-CCeEEEecCchhccCCcHHHHHHHHhCCCCCEEEe--C------cHH
Confidence 3345577777765211 2332 33344665 6777776554 367776665544 59998653 1 145
Q ss_pred HHHHHHHcCCcEE-----EEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecC
Q 015899 280 MTKICKLLGLTAL-----VEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESG 354 (398)
Q Consensus 280 Li~~a~~LGL~~L-----VEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESG 354 (398)
+++.|+++||.++ ++-...+-..+.++-..++.|=+-. .+-+....++.+. .++++|+.|+
T Consensus 93 ~i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiLP------Gi~p~iI~~i~~~--------~~~PiIaGGl 158 (192)
T 3kts_A 93 AIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLP------GIIPEQVQKMTQK--------LHIPVIAGGL 158 (192)
T ss_dssp HHHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEEC------TTCHHHHHHHHHH--------HCCCEEEESS
T ss_pred HHHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEECC------chhHHHHHHHHHh--------cCCCEEEECC
Confidence 7889999999983 4433423222222222566652221 1122333333332 3689999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEcccc
Q 015899 355 LFTPDDIAYVQEAGVKAVLVGESI 378 (398)
Q Consensus 355 I~t~eD~~~l~~~GadaVLVGeaL 378 (398)
|.|.||+..+.++||++|..|+.-
T Consensus 159 I~~~edv~~al~aGA~aVsTs~~~ 182 (192)
T 3kts_A 159 IETSEQVNQVIASGAIAVTTSNKH 182 (192)
T ss_dssp CCSHHHHHHHHTTTEEEEEECCGG
T ss_pred cCCHHHHHHHHHcCCeEEEeCCHH
Confidence 999999999999999999998753
No 189
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=96.61 E-value=0.0067 Score=58.32 Aligned_cols=181 Identities=15% Similarity=0.111 Sum_probs=113.0
Q ss_pred HHHHHHHHHHcCC-cEEEEeccCCcCCCCHHHHHHHHhcCC--CCcEEeccc----------cCCHHHHHHHHHcCcCEE
Q 015899 199 PVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEF----------IVDAWQIYYARTKGADAV 265 (398)
Q Consensus 199 p~~iA~aY~~~GA-~aISVLTd~~~F~Gs~edL~~Ir~a~v--~lPVL~KDF----------Iid~~QI~eAr~~GADaV 265 (398)
..++++.....-. ..+-|+.-|.|- +|..+++. + ++.|-..|. =+.+.++ +.+||+.|
T Consensus 20 ~~~l~~~l~~~~~~~~vev~v~Pp~~-----~L~~v~~~-~~~~i~vgAQn~~~~~~GA~TGEiS~~mL---~d~G~~~V 90 (259)
T 2i9e_A 20 INEIIGFLKSGPLNQDTEVVVGVPAI-----YLELVRTC-VPASIGVAAQNCYKVPKGAFTGEISPAMI---KDVGADWV 90 (259)
T ss_dssp HHHHHHHHHHSCCCTTEEEEEEECGG-----GHHHHHHH-SCTTSEEEESCCCSSSSBSCTTCCCHHHH---HHTTCCEE
T ss_pred HHHHHHHHhhhcccCCeeEEEeCCHH-----HHHHHHHH-hhCCCeEEeccCCCCCCCCccCccCHHHH---HHcCCCEE
Confidence 4455666554211 224555455444 78888765 3 466655552 1555554 56799999
Q ss_pred EEecc----CC--ChHHHHHHHHHHHHcCCcEEEEcCCHHH--------------HHHHh----ccCCCcEEeeccc-cC
Q 015899 266 LLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHDERE--------------MDRVL----GIEGIELIGINNR-NL 320 (398)
Q Consensus 266 LLiaa----iL--~~~~L~~Li~~a~~LGL~~LVEVht~eE--------------l~rAl----~l~Ga~iIGINnR-dL 320 (398)
+|+.+ .+ +|+.+..=++.|.+.||.++++|-...| ++.++ .+ ...+|..-.. -.
T Consensus 91 iiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIvCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~-~~~vIAYEPvWAI 169 (259)
T 2i9e_A 91 ILGHSERRQIFGESDELIAEKVCHALESGLKVIACIGETLEEREAGKTEEVVFRQTKAIAAKVNDW-SNVVIAYEPVWAI 169 (259)
T ss_dssp EESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCSCC-TTEEEEECCGGGT
T ss_pred EECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcchhh-cCEEEEEcCHHHc
Confidence 99998 23 5666888888999999999999986554 65555 22 2223433210 00
Q ss_pred -cccccChhhHHHHhhhhcc---cccc---cCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHH
Q 015899 321 -ETFEVDNSNTKKLLEGERG---EIIR---QKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGIT 389 (398)
Q Consensus 321 -~tf~vDl~~t~~L~~~i~~---~~i~---~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~ 389 (398)
+.-.-+.+...+....+|. ..+- ...+.++..|+++.-++...+...++||+|||.+-+++++..+.++
T Consensus 170 GTG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii~ 245 (259)
T 2i9e_A 170 GTGKTATPQQAQDVHKALRQWICENIDAKVGNSIRIQYGGSVTAANCKELASQPDIDGFLVGGASLKPEFVDIINA 245 (259)
T ss_dssp TSSSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSTHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHhhHHHHhcCCCCCeeeechHhhChHHHHHHHH
Confidence 0112244444444443331 0000 1247899999998888888888899999999999999988776654
No 190
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=96.58 E-value=0.0052 Score=59.34 Aligned_cols=75 Identities=19% Similarity=0.051 Sum_probs=62.1
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcCC---CCHHHHHHHHh-cCCC-CcEEeccccCCHHHHHHHHHcCcCEEEEeccC
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYFK---GSFENLEAVRS-AGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F~---Gs~edL~~Ir~-a~v~-lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (398)
.|| .+|+..++.|+++|--+..+---+ .++++|+.+++ . .+ +||++-..|-+|.++++|.++|||+|++..++
T Consensus 133 ~D~-~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~-~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI 210 (268)
T 2htm_A 133 PDL-VLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREK-ASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAI 210 (268)
T ss_dssp SCH-HHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTT-TTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHH
T ss_pred CCH-HHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhc-CCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 356 789999999999997665542221 15788999988 5 68 99999999999999999999999999999988
Q ss_pred CC
Q 015899 272 LP 273 (398)
Q Consensus 272 L~ 273 (398)
..
T Consensus 211 ~~ 212 (268)
T 2htm_A 211 AE 212 (268)
T ss_dssp HT
T ss_pred hC
Confidence 75
No 191
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=96.57 E-value=0.025 Score=56.39 Aligned_cols=91 Identities=13% Similarity=0.206 Sum_probs=70.4
Q ss_pred CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEec---cCCC--hHHHHHHHHHHHHc--CCcEEEE--c
Q 015899 225 GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIA---AVLP--DLDIRYMTKICKLL--GLTALVE--V 295 (398)
Q Consensus 225 Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLia---aiL~--~~~L~~Li~~a~~L--GL~~LVE--V 295 (398)
-+.++++.+|+. +++||+.|+. .++.....+..+|||+|.+.. +.++ ...+..+.+....+ ++.++++ |
T Consensus 216 ~~~~~i~~lr~~-~~~PvivK~v-~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI 293 (368)
T 2nli_A 216 ISPRDIEEIAGH-SGLPVFVKGI-QHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGV 293 (368)
T ss_dssp CCHHHHHHHHHH-SSSCEEEEEE-CSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSC
T ss_pred hhHHHHHHHHHH-cCCCEEEEcC-CCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCC
Confidence 478999999997 8999999974 778888888999999999843 2231 23455555554455 5778775 6
Q ss_pred CCHHHHHHHhccCCCcEEeeccc
Q 015899 296 HDEREMDRVLGIEGIELIGINNR 318 (398)
Q Consensus 296 ht~eEl~rAl~l~Ga~iIGINnR 318 (398)
++.+++.+++.+ ||+.++|...
T Consensus 294 ~~g~D~~kalal-GAd~V~iGr~ 315 (368)
T 2nli_A 294 RRGEHVAKALAS-GADVVALGRP 315 (368)
T ss_dssp CSHHHHHHHHHT-TCSEEEECHH
T ss_pred CCHHHHHHHHHc-CCCEEEECHH
Confidence 899999999998 9999999843
No 192
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.48 E-value=0.012 Score=55.20 Aligned_cols=83 Identities=16% Similarity=0.063 Sum_probs=64.9
Q ss_pred HHHHHHHHHcCCcEEEEe----ccC-CcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCCh
Q 015899 200 VEIARSYEKGGAACLSIL----TDE-KYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL----Td~-~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~ 274 (398)
.+.|+.+++.||+.|.+. |.. +-+.-+++.++.+++. ++||+.-..|-++.++.+++.+|||+|+++.++..+
T Consensus 139 ~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~p 216 (232)
T 3igs_A 139 VDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA--GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITRL 216 (232)
T ss_dssp HHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHCH
T ss_pred HHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcCH
Confidence 366788889999999641 221 2355688889999874 899999999899999999999999999999887766
Q ss_pred HH-HHHHHHHH
Q 015899 275 LD-IRYMTKIC 284 (398)
Q Consensus 275 ~~-L~~Li~~a 284 (398)
.+ .++|.+..
T Consensus 217 ~~~~~~~~~~i 227 (232)
T 3igs_A 217 EHICGWYNDAL 227 (232)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44 55665543
No 193
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=96.47 E-value=0.014 Score=58.43 Aligned_cols=122 Identities=11% Similarity=0.098 Sum_probs=84.1
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEecc---CC--
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---VL-- 272 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa---iL-- 272 (398)
+..+.++...++|++.|-+-+-..+...-.+.++.+|+...++||+.|. +.++.+...+..+|||+|.+... ..
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~-V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~t 178 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGN-VATYAGADYLASCGADIIKAGIGGGSVCST 178 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEE-ECSHHHHHHHHHTTCSEEEECCSSSSCHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcC-cCCHHHHHHHHHcCCCEEEEcCCCCcCccc
Confidence 4567899999999998877443332222246788888752379999876 57888899999999999998322 11
Q ss_pred ------ChHHHHHHHHHHHHcCCcEEE--EcCCHHHHHHHhccCCCcEEeeccccCcc
Q 015899 273 ------PDLDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLET 322 (398)
Q Consensus 273 ------~~~~L~~Li~~a~~LGL~~LV--EVht~eEl~rAl~l~Ga~iIGINnRdL~t 322 (398)
...++..+.+.+.... .+++ -+.+..++.+|+.+ ||+.+++...=+.+
T Consensus 179 r~~~g~g~p~l~aI~~~~~~~~-PVIAdGGI~~~~di~kALa~-GAd~V~iGr~f~~t 234 (361)
T 3r2g_A 179 RIKTGFGVPMLTCIQDCSRADR-SIVADGGIKTSGDIVKALAF-GADFVMIGGMLAGS 234 (361)
T ss_dssp HHHHCCCCCHHHHHHHHTTSSS-EEEEESCCCSHHHHHHHHHT-TCSEEEESGGGTTB
T ss_pred cccCCccHHHHHHHHHHHHhCC-CEEEECCCCCHHHHHHHHHc-CCCEEEEChHHhCC
Confidence 0113554444433333 4555 57899999999998 99999998554444
No 194
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=96.46 E-value=0.0055 Score=57.27 Aligned_cols=185 Identities=16% Similarity=0.165 Sum_probs=106.5
Q ss_pred CHHHHHHHHHHcCC--cEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE--eccccCCHH---HHHHHHHcCcCEEEEecc
Q 015899 198 DPVEIARSYEKGGA--ACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--CKEFIVDAW---QIYYARTKGADAVLLIAA 270 (398)
Q Consensus 198 dp~~iA~aY~~~GA--~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL--~KDFIid~~---QI~eAr~~GADaVLLiaa 270 (398)
+..+.-+..++.|. .++=+-+|= |+.-++.-++.+|+. +.+|+ +|=.-++.. -++.+..+|||+|-+-+.
T Consensus 14 ~l~~~~~~~~~~~~~v~~~Kv~~d~-~~~~G~~~v~~l~~~--~~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vtvH~~ 90 (239)
T 1dbt_A 14 SAEETLAFLAPFQQEPLFVKVGMEL-FYQEGPSIVKQLKER--NCELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAA 90 (239)
T ss_dssp SHHHHHHHTGGGTTSCCEEEECHHH-HHHHTHHHHHHHHHT--TCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGG
T ss_pred CHHHHHHHHHHhcccCcEEEECHHH-HHHhCHHHHHHHHHC--CCcEEEEeccccchHHHHHHHHHHHhcCCCEEEEeCc
Confidence 55555566666664 563333332 555678888899875 34443 232212332 455678899999999765
Q ss_pred CCChHHHHHHHHHHHHc---CCc----EEEEcCCH---HHH-HHH-hccCCCcEE---eeccc--cCcccccChhhHHHH
Q 015899 271 VLPDLDIRYMTKICKLL---GLT----ALVEVHDE---REM-DRV-LGIEGIELI---GINNR--NLETFEVDNSNTKKL 333 (398)
Q Consensus 271 iL~~~~L~~Li~~a~~L---GL~----~LVEVht~---eEl-~rA-l~l~Ga~iI---GINnR--dL~tf~vDl~~t~~L 333 (398)
. ....+..+++.+++. |+. +.|-+.+. +++ +.. +...-.++| +.++. ....|-...+...++
T Consensus 91 ~-g~~~l~~~~~~~~~~~~~g~~~~~~~~V~~~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v~~~~~i~~l 169 (239)
T 1dbt_A 91 G-GKKMMQAALEGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSVHEAKAI 169 (239)
T ss_dssp G-CHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECCGGGHHHH
T ss_pred C-CHHHHHHHHHHHHhhhccCCCCccEEEEEEcCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEEEECHHHHHHH
Confidence 4 444478889998887 874 33334322 333 221 110001111 11111 122232333333444
Q ss_pred hhhhcccccccCCceEEEecCCCCHHH----------HHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 334 LEGERGEIIRQKNIIVVGESGLFTPDD----------IAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 334 ~~~i~~~~i~~~~v~vVAESGI~t~eD----------~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
.+. + + +..++.-+||+-... ...+.++|+|.++||++|++++||.++++++..
T Consensus 170 r~~-----~-~-~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~ 232 (239)
T 1dbt_A 170 YQA-----V-S-PSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKAEDPVKAYKAVRL 232 (239)
T ss_dssp TTT-----S-C-TTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHH
T ss_pred HHh-----c-C-CCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhhcCCCCHHHHHHHHHH
Confidence 332 1 2 346677899964332 267789999999999999999999999988853
No 195
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=96.43 E-value=0.017 Score=56.91 Aligned_cols=43 Identities=21% Similarity=0.300 Sum_probs=37.0
Q ss_pred CceEEEecCCCCHHHHHHHHHcCCCEEEEccccc-CCCChHHHH
Q 015899 346 NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIV-KQDDPGKGI 388 (398)
Q Consensus 346 ~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLm-k~~dp~~~i 388 (398)
++++|+-|||.|.+|+.+...+||++|-||++++ +.+.....|
T Consensus 277 ~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~GP~~~~~I 320 (354)
T 3tjx_A 277 GKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERL 320 (354)
T ss_dssp TSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHH
T ss_pred CCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhcCchHHHHH
Confidence 5789999999999999999999999999999975 666654443
No 196
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=96.40 E-value=0.006 Score=56.34 Aligned_cols=93 Identities=19% Similarity=0.264 Sum_probs=71.5
Q ss_pred CCCCC-CCCCHHHHHHHHHHcCCcEEEEec---cCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHc-----
Q 015899 190 RGILR-EDFDPVEIARSYEKGGAACLSILT---DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK----- 260 (398)
Q Consensus 190 kG~i~-~~~dp~~iA~aY~~~GA~aISVLT---d~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~----- 260 (398)
+|+-. ...++.++++.+++.|+..|-+.+ |..+++=+++.++.+++. +++||+.-..|-++.++.+.+..
T Consensus 136 ~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~-~~iPvia~GGI~~~~d~~~~~~~~~~~~ 214 (241)
T 1qo2_A 136 KGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGTLQEHDFSLTKKIAIE-AEVKVLAAGGISSENSLKTAQKVHTETN 214 (241)
T ss_dssp TTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHHHHTCCCCHHHHHHHHHH-HTCEEEEESSCCSHHHHHHHHHHHHHTT
T ss_pred CCceecCCCCHHHHHHHHHhCCCCEEEEEeecccccCCcCCHHHHHHHHHh-cCCcEEEECCCCCHHHHHHHHhcccccC
Confidence 35433 235899999999999999887743 122344478999999987 89999999999999999999988
Q ss_pred C-cCEEEEeccCCCh-HHHHHHHHH
Q 015899 261 G-ADAVLLIAAVLPD-LDIRYMTKI 283 (398)
Q Consensus 261 G-ADaVLLiaaiL~~-~~L~~Li~~ 283 (398)
| ||+|+++.+++.. -.++++.++
T Consensus 215 G~adgv~vgsal~~~~~~~~~~~~~ 239 (241)
T 1qo2_A 215 GLLKGVIVGRAFLEGILTVEVMKRY 239 (241)
T ss_dssp TSEEEEEECHHHHTTSSCHHHHHHH
T ss_pred CeEeEEEeeHHHHcCCCCHHHHHHH
Confidence 9 9999999887743 336665554
No 197
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=96.39 E-value=0.016 Score=55.47 Aligned_cols=167 Identities=11% Similarity=0.040 Sum_probs=100.7
Q ss_pred EEEeccCCcCCCCHHHHHHHHhc--CCCCcEEeccc----------cCCHHHHHHHHHcCcCEEEEeccC----C--ChH
Q 015899 214 LSILTDEKYFKGSFENLEAVRSA--GVKCPLLCKEF----------IVDAWQIYYARTKGADAVLLIAAV----L--PDL 275 (398)
Q Consensus 214 ISVLTd~~~F~Gs~edL~~Ir~a--~v~lPVL~KDF----------Iid~~QI~eAr~~GADaVLLiaai----L--~~~ 275 (398)
+-|+.-|.|- +|..+++. +.++.|=..|. =+++.++ +.+||+.|+|+.+= + +++
T Consensus 35 vev~v~Pp~~-----~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~mL---~d~G~~~ViiGHSERR~~f~Etd~ 106 (250)
T 1yya_A 35 SEAAVLPAFP-----ILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSARML---SDLGCRYAIVGHSERRRYHGETDA 106 (250)
T ss_dssp SEEEEECCGG-----GHHHHHHHHTTSSCEEEESCCCSSSSBSCTTCCCHHHH---HHTTCSEEEESCHHHHHHSCCCHH
T ss_pred ceEEEeCCHH-----HHHHHHHHhcCCCCeEEeccCCCCCCCCccCcCCHHHH---HHcCCCEEEeCchhhhcccCCCHH
Confidence 4444444444 66666543 12455555442 1555554 55799999999983 2 566
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCHHH--------------HHHHhccCCCc-----EEeeccc-cC-cccccChhhHHHHh
Q 015899 276 DIRYMTKICKLLGLTALVEVHDERE--------------MDRVLGIEGIE-----LIGINNR-NL-ETFEVDNSNTKKLL 334 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEVht~eE--------------l~rAl~l~Ga~-----iIGINnR-dL-~tf~vDl~~t~~L~ 334 (398)
.+..=++.|.+.||.++++|-...| +..++..-+++ +|..-.. -. +.-..+.+...+..
T Consensus 107 ~v~~Kv~~Al~~GL~pI~CvGE~leere~g~t~~vv~~Ql~~~l~~~~~~~~~~vvIAYEPvWAIGTG~~Atpe~aqevh 186 (250)
T 1yya_A 107 LVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNATPEDAEAMH 186 (250)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCSSGGGCEEEECCGGGSSSSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHcCcEEEEECCHHHhCCCCCCCHHHHHHHH
Confidence 6788888899999999999975433 23333211223 4432210 00 00122344444443
Q ss_pred hhhccc---ccc---cCCceEEEecCCCCHHHHHHHHHc-CCCEEEEcccccCCCChHHHHH
Q 015899 335 EGERGE---IIR---QKNIIVVGESGLFTPDDIAYVQEA-GVKAVLVGESIVKQDDPGKGIT 389 (398)
Q Consensus 335 ~~i~~~---~i~---~~~v~vVAESGI~t~eD~~~l~~~-GadaVLVGeaLmk~~dp~~~i~ 389 (398)
..+|.- .+- ...+.++..|+++. +++..+... ++||+|||.+-+++++..+.++
T Consensus 187 ~~IR~~l~~~~~~~~a~~vrIlYGGSV~~-~N~~~l~~~~diDG~LVGgAsL~a~~F~~ii~ 247 (250)
T 1yya_A 187 QAIRKALSERYGEAFASRVRILYGGSVNP-KNFADLLSMPNVDGGLVGGASLELESFLALLR 247 (250)
T ss_dssp HHHHHHHHHHHCHHHHTTCEEEEESSCCT-TTHHHHHTSTTCCEEEESGGGSSHHHHHHHHH
T ss_pred HHHHHHHHHhcCccccCceeEEEcCCCCH-HHHHHHHcCCCCCeeEeeHHHhChHHHHHHHH
Confidence 333221 010 13578888999955 999999888 9999999999999888776664
No 198
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=96.37 E-value=0.023 Score=56.82 Aligned_cols=127 Identities=13% Similarity=0.020 Sum_probs=83.2
Q ss_pred HHHHHcCcCEEEEeccC--------------CCh-------HH---HHHHHHHHHH-cCC-cEEEEcCC-----------
Q 015899 255 YYARTKGADAVLLIAAV--------------LPD-------LD---IRYMTKICKL-LGL-TALVEVHD----------- 297 (398)
Q Consensus 255 ~eAr~~GADaVLLiaai--------------L~~-------~~---L~~Li~~a~~-LGL-~~LVEVht----------- 297 (398)
..|.++|.|+|=|.++- .+| .. +.++++..++ .|- .+.|.++-
T Consensus 174 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~ 253 (376)
T 1icp_A 174 RNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTN 253 (376)
T ss_dssp HHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSC
T ss_pred HHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCC
Confidence 35567899999987752 111 11 4555555553 443 67777751
Q ss_pred ----HHHHHHHhccCCCcEEeeccccCcccc---cChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcC-C
Q 015899 298 ----EREMDRVLGIEGIELIGINNRNLETFE---VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAG-V 369 (398)
Q Consensus 298 ----~eEl~rAl~l~Ga~iIGINnRdL~tf~---vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~G-a 369 (398)
..++-+.++-.|++.|-+.++...... .+.+...++.+. .++++|+-||| +++++.++.+.| |
T Consensus 254 ~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~--------~~iPvi~~G~i-~~~~a~~~l~~g~a 324 (376)
T 1icp_A 254 PTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKA--------YKGTFIVAGGY-DREDGNRALIEDRA 324 (376)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHH--------CCSCEEEESSC-CHHHHHHHHHTTSC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHH--------cCCCEEEeCCC-CHHHHHHHHHCCCC
Confidence 123344443348999988766443211 123334444443 25689999999 999999999998 9
Q ss_pred CEEEEcccccCCCChHHHHHh
Q 015899 370 KAVLVGESIVKQDDPGKGITG 390 (398)
Q Consensus 370 daVLVGeaLmk~~dp~~~i~~ 390 (398)
|+|.+|.+++..++....+++
T Consensus 325 D~V~~gR~~l~~P~l~~k~~~ 345 (376)
T 1icp_A 325 DLVAYGRLFISNPDLPKRFEL 345 (376)
T ss_dssp SEEEESHHHHHCTTHHHHHHH
T ss_pred cEEeecHHHHhCccHHHHHHc
Confidence 999999999999998877764
No 199
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.37 E-value=0.0094 Score=62.54 Aligned_cols=92 Identities=23% Similarity=0.136 Sum_probs=75.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccC---CcCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHH-cCcCEEEEeccC
Q 015899 197 FDPVEIARSYEKGGAACLSILTDE---KYFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYART-KGADAVLLIAAV 271 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~---~~F~G-s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~-~GADaVLLiaai 271 (398)
.++.+.|+.+++.||..|- +|+- +.++| +++.++.++++ +++||+.-..|-++.++.++.. .|||+|+...++
T Consensus 452 ~~~~e~a~~~~~~Ga~~il-~t~~~~dG~~~G~d~~li~~l~~~-~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~ 529 (555)
T 1jvn_A 452 LGVWELTRACEALGAGEIL-LNCIDKDGSNSGYDLELIEHVKDA-VKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMF 529 (555)
T ss_dssp EEHHHHHHHHHHTTCCEEE-ECCGGGTTTCSCCCHHHHHHHHHH-CSSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHH
T ss_pred CCHHHHHHHHHHcCCCEEE-EeCCCCCCCCCCCCHHHHHHHHHh-CCccEEEECCCCCHHHHHHHHHhcCChHHHHHHHH
Confidence 5789999999999999995 5552 33344 67888888887 8999999999999999999987 899999998777
Q ss_pred CChH-HHHHHHHHHHHcCCc
Q 015899 272 LPDL-DIRYMTKICKLLGLT 290 (398)
Q Consensus 272 L~~~-~L~~Li~~a~~LGL~ 290 (398)
..+. .+.++.++++.-|+.
T Consensus 530 ~~~~~~~~e~~~~l~~~gi~ 549 (555)
T 1jvn_A 530 HRGEFTVNDVKEYLLEHGLK 549 (555)
T ss_dssp HTTSCCHHHHHHHHHHTTCC
T ss_pred HcCCCCHHHHHHHHHHCCCc
Confidence 6543 478888877777875
No 200
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=96.34 E-value=0.0061 Score=59.38 Aligned_cols=72 Identities=15% Similarity=0.069 Sum_probs=58.7
Q ss_pred HHH--HHHHHcCCc---EEEEeccCCcCCCCHHHHHHHHhcCC--CCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCC
Q 015899 201 EIA--RSYEKGGAA---CLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 201 ~iA--~aY~~~GA~---aISVLTd~~~F~Gs~edL~~Ir~a~v--~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (398)
++| .+|...|+. -+ |-.|-......++.++.+++. + ++||.....|.++.|+.++..+|||+|.+..++..
T Consensus 184 e~A~~~aYa~~gad~G~~l-V~LD~~~~~v~~e~V~~I~~~-~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~ 261 (286)
T 3vk5_A 184 STEEIDRYLHVARAFGFHM-VYLYSRNEHVPPEVVRHFRKG-LGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQ 261 (286)
T ss_dssp SSHHHHHHHHHHHHTTCSE-EEEECSSSCCCHHHHHHHHHH-SCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSS
T ss_pred HHHHHHHHHHHHHHcCCCE-EEEcCCCCcCCHHHHHHHHHh-cCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhc
Confidence 677 777777663 22 223344466788999999987 8 89999999999999999999999999999999987
Q ss_pred h
Q 015899 274 D 274 (398)
Q Consensus 274 ~ 274 (398)
+
T Consensus 262 d 262 (286)
T 3vk5_A 262 P 262 (286)
T ss_dssp T
T ss_pred C
Confidence 6
No 201
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=96.33 E-value=0.0063 Score=56.35 Aligned_cols=167 Identities=10% Similarity=0.098 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE--e--ccccCCH-HHHHHHHHcCcCEEEEeccCC
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--C--KEFIVDA-WQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL--~--KDFIid~-~QI~eAr~~GADaVLLiaaiL 272 (398)
...++++... +..|+=|-++= |. .+++-++.+|+. +.+|+ + -|..-+. ..++.+..+|||+|-+-+. .
T Consensus 23 ~a~~i~~~~~--~~~~~Kvg~~l-~~-~G~~~v~~l~~~--~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~vTvh~~-~ 95 (213)
T 1vqt_A 23 DPIRFIDENG--SFEVVKVGHNL-AI-HGKKIFDELAKR--NLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHSC-A 95 (213)
T ss_dssp SHHHHHHHHC--CCSEEEECHHH-HT-TCTHHHHHHHTT--TCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEGG-G
T ss_pred HHHHHHHHhC--CCCEEEECHHH-Hh-hCHHHHHHHHHC--CCCEEEEeecccCchHHHHHHHHHHHCCCCEEEEecc-C
Confidence 4555666653 33556665543 33 566788889874 67776 2 3433222 2355677899999998653 4
Q ss_pred ChHHHHHHHHHHH--HcCCcEEEEcCC-H-HHHH---HHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccC
Q 015899 273 PDLDIRYMTKICK--LLGLTALVEVHD-E-REMD---RVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQK 345 (398)
Q Consensus 273 ~~~~L~~Li~~a~--~LGL~~LVEVht-~-eEl~---rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~ 345 (398)
..+.++.+.+.++ -+++.+|..... . +.+. +..++ |+++|... +...++.+. .+.
T Consensus 96 G~~~l~~~~~~~~~~~~~V~~lts~~~~l~~~v~~~a~~~e~-G~dvV~~~-----------~~~~~ir~~------~~~ 157 (213)
T 1vqt_A 96 GYESVERALSATDKHVFVVVKLTSMEGSLEDYMDRIEKLNKL-GCDFVLPG-----------PWAKALREK------IKG 157 (213)
T ss_dssp CHHHHHHHHHHCSSEEEEECCCTTSCCCHHHHHHHHHHHHHH-TCEEECCH-----------HHHHHHTTT------CCS
T ss_pred CHHHHHHHHHhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhcC-CCEEEEcH-----------HHHHHHHHH------CCC
Confidence 4445777776654 122222212211 0 2111 11344 66643311 223333332 122
Q ss_pred CceEEEecCCCCH---HH------HHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 346 NIIVVGESGLFTP---DD------IAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 346 ~v~vVAESGI~t~---eD------~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
. +.-.||.-. .| +.. .++|+|.++||.+|++++||.++++++..
T Consensus 158 ~---~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVvGR~I~~a~dP~~aa~~i~~ 210 (213)
T 1vqt_A 158 K---ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVLGREIYLSENPREKIKRIKE 210 (213)
T ss_dssp C---EEECCBC---------CCBCHHH-HTTTCSEEEESHHHHTSSCHHHHHHHHTC
T ss_pred C---EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEEChhhcCCCCHHHHHHHHHH
Confidence 3 334576432 22 567 79999999999999999999999998854
No 202
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=96.31 E-value=0.011 Score=58.35 Aligned_cols=92 Identities=22% Similarity=0.274 Sum_probs=71.0
Q ss_pred CCCHHHHHHHHHHcCCcEEEEec---cCC---cCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEE
Q 015899 196 DFDPVEIARSYEKGGAACLSILT---DEK---YFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL 267 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLT---d~~---~F~G-s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLL 267 (398)
..+..++|+.+++.|++.|+|-. .+. ...| ..+.+..+|+. +++||+.-..|.++.+..++...| ||.|.+
T Consensus 228 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~-~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 228 AKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRRE-ADIPTGAVGLITSGWQAEEILQNGRADLVFL 306 (340)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-TTCCEEEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHH-cCCcEEeeCCCCCHHHHHHHHHCCCeeEEEe
Confidence 45789999999999999999963 111 1223 46778889987 899999999889999999999999 999999
Q ss_pred eccCCChHHHHHHHHHHHHcCCc
Q 015899 268 IAAVLPDLDIRYMTKICKLLGLT 290 (398)
Q Consensus 268 iaaiL~~~~L~~Li~~a~~LGL~ 290 (398)
.-.++.+.++-. +....+|.+
T Consensus 307 GR~~lanPdl~~--ki~~~l~~~ 327 (340)
T 3gr7_A 307 GRELLRNPYWPY--AAARELGAK 327 (340)
T ss_dssp CHHHHHCTTHHH--HHHHHTTCC
T ss_pred cHHHHhCchHHH--HHHHHCCCC
Confidence 888886555432 334456654
No 203
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.30 E-value=0.0092 Score=63.43 Aligned_cols=46 Identities=17% Similarity=0.152 Sum_probs=41.9
Q ss_pred CceEEEecCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHhh
Q 015899 346 NIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITGL 391 (398)
Q Consensus 346 ~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~L 391 (398)
++++|+-|||.+++++.++.+.| ||+|-+|.+++..||....+++=
T Consensus 294 ~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~~~~g 340 (690)
T 3k30_A 294 TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRDG 340 (690)
T ss_dssp SSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHTT
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHHHHcC
Confidence 67999999999999999999988 99999999999999988877653
No 204
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.30 E-value=0.014 Score=54.66 Aligned_cols=81 Identities=15% Similarity=0.110 Sum_probs=63.2
Q ss_pred HHHHHHHHHcCCcEEEE----eccC-CcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCCh
Q 015899 200 VEIARSYEKGGAACLSI----LTDE-KYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISV----LTd~-~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~ 274 (398)
.+.|+..++.||+.|.+ +|.. +-+.-+++.++.+++. ++||+.-..|-++.++.+++.+|||+|+++.++..+
T Consensus 139 ~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~p 216 (229)
T 3q58_A 139 VNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA--GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRI 216 (229)
T ss_dssp HHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT--TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHCH
T ss_pred HHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcCh
Confidence 46678888999999964 1221 1245578888888874 899999999999999999999999999999887766
Q ss_pred HH-HHHHHH
Q 015899 275 LD-IRYMTK 282 (398)
Q Consensus 275 ~~-L~~Li~ 282 (398)
.+ .+.|++
T Consensus 217 ~~~~~~f~~ 225 (229)
T 3q58_A 217 EHICQWFSH 225 (229)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 44 555554
No 205
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=96.24 E-value=0.0023 Score=61.10 Aligned_cols=175 Identities=14% Similarity=0.103 Sum_probs=107.3
Q ss_pred HHHHHHHHHHcCC-cEEEEeccCCcCCCCHHHHHHHHhcCC--CCcEEeccc----------cCCHHHHHHHHHcCcCEE
Q 015899 199 PVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEF----------IVDAWQIYYARTKGADAV 265 (398)
Q Consensus 199 p~~iA~aY~~~GA-~aISVLTd~~~F~Gs~edL~~Ir~a~v--~lPVL~KDF----------Iid~~QI~eAr~~GADaV 265 (398)
..++++.....-. ..+-|+.-|.|- +|..+++. + ++.|-..|. =+++.+ .+.+||+.|
T Consensus 21 ~~~l~~~l~~~~~~~~vev~v~Pp~~-----~L~~v~~~-~~~~i~vgAQn~~~~~~GA~TGEiS~~m---L~d~G~~~V 91 (248)
T 1r2r_A 21 LGELITTLNAAKVPADTEVVCAPPTA-----YIDFARQK-LDPKIAVAAQNCYKVTNGAFTGEISPGM---IKDCGATWV 91 (248)
T ss_dssp HHHHHHHHHHSCCCTTEEEEEECCGG-----GHHHHHHH-SCTTSEEEESCCCSSSSBSCTTCCCHHH---HHHTTCCEE
T ss_pred HHHHHHHHHhhccccCceEEEeCcHH-----HHHHHHHH-hhCCceEEeccCCCCCCCCccCccCHHH---HHHcCCCEE
Confidence 3455555544211 134555555544 78777764 3 366655552 145555 456799999
Q ss_pred EEecc----CC--ChHHHHHHHHHHHHcCCcEEEEcCC-HHHHH-------------HHhc----c-------CCCcEEe
Q 015899 266 LLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHD-EREMD-------------RVLG----I-------EGIELIG 314 (398)
Q Consensus 266 LLiaa----iL--~~~~L~~Li~~a~~LGL~~LVEVht-~eEl~-------------rAl~----l-------~Ga~iIG 314 (398)
+|+.+ .+ +++.+..=++.|.+.||.++++|.. ++|-+ .++. + +....||
T Consensus 92 iiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~vIAYEPvWAIG 171 (248)
T 1r2r_A 92 VLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIG 171 (248)
T ss_dssp EESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCSCGGGEEEEECCGGGSS
T ss_pred EECChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHHHHHhhhhhhhceEEEEecHHhhC
Confidence 99998 23 4666788888899999999999975 44322 1121 1 1112233
Q ss_pred eccccCcccccChhhHHHHhhhhccc---ccc---cCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHH
Q 015899 315 INNRNLETFEVDNSNTKKLLEGERGE---IIR---QKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGI 388 (398)
Q Consensus 315 INnRdL~tf~vDl~~t~~L~~~i~~~---~i~---~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i 388 (398)
.. + .-+.+...+....+|.- .+- ...+.++..|+++.-++...+...++||+|||.+-+++++..+.+
T Consensus 172 TG----~--~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~ii 245 (248)
T 1r2r_A 172 TG----K--TATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIIN 245 (248)
T ss_dssp SS----C--CCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSTHHHHHHT
T ss_pred CC----C--CCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHHcCCCCCeeEechHHhChHHHHHHH
Confidence 32 1 12444444443333310 010 124789999999888888888889999999999999988766544
No 206
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=96.19 E-value=0.008 Score=55.21 Aligned_cols=85 Identities=11% Similarity=0.174 Sum_probs=67.9
Q ss_pred CHHHHHHHHHHcCCcEEEEec-cCC-cCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHc---CcCEEEEeccC
Q 015899 198 DPVEIARSYEKGGAACLSILT-DEK-YFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK---GADAVLLIAAV 271 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLT-d~~-~F~G-s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~---GADaVLLiaai 271 (398)
++.+.++.+++.|+..|-+.+ ++. .++| +++.++.+++. +++||+.-..|.++..+.++..+ |||+|+++.++
T Consensus 150 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~-~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al 228 (244)
T 2y88_A 150 DLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADR-TDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKAL 228 (244)
T ss_dssp EHHHHHHHHHHTTCCCEEEEETTTTTTTSCCCHHHHHHHHTT-CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHH
T ss_pred CHHHHHHHHHhCCCCEEEEEecCCccccCCCCHHHHHHHHHh-CCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHH
Confidence 789999999999999998765 332 3333 67888888886 89999999998889999999988 99999999887
Q ss_pred CChH-HHHHHHHH
Q 015899 272 LPDL-DIRYMTKI 283 (398)
Q Consensus 272 L~~~-~L~~Li~~ 283 (398)
+... .+.++.++
T Consensus 229 ~~~~~~~~~~~~~ 241 (244)
T 2y88_A 229 YARRFTLPQALAA 241 (244)
T ss_dssp HTTSSCHHHHHHH
T ss_pred HCCCcCHHHHHHH
Confidence 7543 35555543
No 207
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=96.19 E-value=0.0052 Score=58.73 Aligned_cols=180 Identities=11% Similarity=0.088 Sum_probs=104.9
Q ss_pred HHHHHHHHHHcCC--cEEEEeccCCcCCCCHHHHHHHHhcCC--CCcEEeccc----------cCCHHHHHHHHHcCcCE
Q 015899 199 PVEIARSYEKGGA--ACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEF----------IVDAWQIYYARTKGADA 264 (398)
Q Consensus 199 p~~iA~aY~~~GA--~aISVLTd~~~F~Gs~edL~~Ir~a~v--~lPVL~KDF----------Iid~~QI~eAr~~GADa 264 (398)
..++++.....-. ..+-|+.-|.|- +|..+++. + ++.|=..|. =+++.++ +.+||+.
T Consensus 20 ~~~l~~~l~~~~~~~~~vev~v~Pp~~-----~L~~v~~~-~~~~i~vgAQn~~~~~~GA~TGEiS~~mL---~d~G~~~ 90 (248)
T 1o5x_A 20 IKSLTNSFNNLDFDPSKLDVVVFPVSV-----HYDHTRKL-LQSKFSTGIQNVSKFGNGSYTGEVSAEIA---KDLNIEY 90 (248)
T ss_dssp HHHHHHHHHTSCCCTTTEEEEEECCGG-----GHHHHHHH-SCTTSEEEESCCCSSCSBSCTTCCCHHHH---HHTTCCE
T ss_pred HHHHHHHHHhhcccccCceEEEeCcHH-----HHHHHHHH-hccCCeEEeccCCCCCCCCcCCcCCHHHH---HHcCCCE
Confidence 3445555543111 134555555544 78877764 3 355555542 1555554 5679999
Q ss_pred EEEeccC----C--ChHHHHHHHHHHHHcCCcEEEEcCC-HHHHH-------------HHhcc-C--CCcEEeeccc-cC
Q 015899 265 VLLIAAV----L--PDLDIRYMTKICKLLGLTALVEVHD-EREMD-------------RVLGI-E--GIELIGINNR-NL 320 (398)
Q Consensus 265 VLLiaai----L--~~~~L~~Li~~a~~LGL~~LVEVht-~eEl~-------------rAl~l-~--Ga~iIGINnR-dL 320 (398)
|+|+.+= + +++.+..=++.|.+.||.++++|.. ++|-+ .++.. + ...+|..-.. -.
T Consensus 91 ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~vIAYEPvWAI 170 (248)
T 1o5x_A 91 VIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAI 170 (248)
T ss_dssp EEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHTTGGGCCCTTSEEEEECCGGGS
T ss_pred EEeCChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCChHHHHHHHHHHHHhhhhhhcCEEEEECCHHHh
Confidence 9999983 2 4666777888899999999999974 44321 12220 0 1112222110 00
Q ss_pred -cccccChhhHHHHhhhhccc---ccc---cCCceEEEecCCCCHHHHHHHHH-cCCCEEEEcccccCCCChHHHHH
Q 015899 321 -ETFEVDNSNTKKLLEGERGE---IIR---QKNIIVVGESGLFTPDDIAYVQE-AGVKAVLVGESIVKQDDPGKGIT 389 (398)
Q Consensus 321 -~tf~vDl~~t~~L~~~i~~~---~i~---~~~v~vVAESGI~t~eD~~~l~~-~GadaVLVGeaLmk~~dp~~~i~ 389 (398)
+.-..+.+...+....+|.- .+- ..++.++..|++ +++++..+.. .++||+|||.+-++ ++..+.++
T Consensus 171 GTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~ii~ 245 (248)
T 1o5x_A 171 GTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSV-NTENCSSLIQQEDIDGFLVGNASLK-ESFVDIIK 245 (248)
T ss_dssp SSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEECSCC-CTTTHHHHHTSTTCCEEEECGGGGS-TTHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCCC-CHHHHHHHHcCCCCCeeEeeHHHHH-HHHHHHHH
Confidence 00122344444443333221 010 124678888888 5558888887 89999999999999 98887765
No 208
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=96.17 E-value=0.003 Score=61.23 Aligned_cols=182 Identities=12% Similarity=0.069 Sum_probs=110.8
Q ss_pred HHHHHHHHHHcCC-cEEEEeccCCcCCCCHHHHHHHHhcCC--CCcEEeccc----------cCCHHHHHHHHHcCcCEE
Q 015899 199 PVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEF----------IVDAWQIYYARTKGADAV 265 (398)
Q Consensus 199 p~~iA~aY~~~GA-~aISVLTd~~~F~Gs~edL~~Ir~a~v--~lPVL~KDF----------Iid~~QI~eAr~~GADaV 265 (398)
..++++.....-. ..+-|+.-|.|- +|..+++. + ++.|-..|. =|.+.++ +.+|++.|
T Consensus 40 ~~~l~~~l~~~~~~~~vevvv~Pp~~-----~L~~v~~~-~~~~i~vgAQn~~~~~~GAfTGEIS~~mL---kd~G~~~V 110 (275)
T 1mo0_A 40 VDGIVTFLNASADNSSVDVVVAPPAP-----YLAYAKSK-LKAGVLVAAQNCYKVPKGAFTGEISPAMI---KDLGLEWV 110 (275)
T ss_dssp HHHHHHHHHHSCCCTTEEEEEECCGG-----GHHHHHHH-SCTTEEEEESCCCSSSSBSCTTCCCHHHH---HHTTCCEE
T ss_pred HHHHHHHHhhhccccCceEEEeCcHH-----HHHHHHHH-hhCCCeEEeccCCCCCCCCccCcCCHHHH---HHcCCCEE
Confidence 4456666654211 135555555544 78877764 3 345544442 1555554 56799999
Q ss_pred EEecc----CC--ChHHHHHHHHHHHHcCCcEEEEcC-CHHHHH-------------HHhc----cCCCcEEeeccc-cC
Q 015899 266 LLIAA----VL--PDLDIRYMTKICKLLGLTALVEVH-DEREMD-------------RVLG----IEGIELIGINNR-NL 320 (398)
Q Consensus 266 LLiaa----iL--~~~~L~~Li~~a~~LGL~~LVEVh-t~eEl~-------------rAl~----l~Ga~iIGINnR-dL 320 (398)
+|+.+ .+ +++.+..=++.|.+.||.++++|- +++|-+ .++. + ...+|..-.. -.
T Consensus 111 iiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pI~CvGEtleeReag~t~~vv~~Ql~~~l~~~~~~-~~vvIAYEPvWAI 189 (275)
T 1mo0_A 111 ILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDKGVSW-ENIVIAYEPVWAI 189 (275)
T ss_dssp EESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTTCCS-TTEEEEECCGGGT
T ss_pred EeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHHHHHhhhhhh-cCEEEEECCHHHh
Confidence 99998 23 466678888889999999999996 444433 1222 1 1223322110 00
Q ss_pred -cccccChhhHHHHhhhhccc---ccc---cCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHh
Q 015899 321 -ETFEVDNSNTKKLLEGERGE---IIR---QKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITG 390 (398)
Q Consensus 321 -~tf~vDl~~t~~L~~~i~~~---~i~---~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~ 390 (398)
+.-.-+.+...+....+|.- .+- ..++.++-.|+++.-++...+...++||+|||.+-+++++..+.++.
T Consensus 190 GTGktAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~~~~diDG~LVGgASLka~~F~~Ii~~ 266 (275)
T 1mo0_A 190 GTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKPDFVKIINAR 266 (275)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCTTTHHHHTTSTTCCEEEESGGGGSTHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhhChhhcCcccEEEcCCCCHhhHHHHhcCCCCCeeEechHHhChHHHHHHHHh
Confidence 00122444444444433310 010 12478999999988888888888999999999999999988877753
No 209
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.16 E-value=0.042 Score=54.50 Aligned_cols=124 Identities=18% Similarity=0.301 Sum_probs=78.5
Q ss_pred CHHHHHHHHHcCcCEEEEeccCCCh----------HHHHHHHHHHHHcCCcEEEEc--C-----C-------------HH
Q 015899 250 DAWQIYYARTKGADAVLLIAAVLPD----------LDIRYMTKICKLLGLTALVEV--H-----D-------------ER 299 (398)
Q Consensus 250 d~~QI~eAr~~GADaVLLiaaiL~~----------~~L~~Li~~a~~LGL~~LVEV--h-----t-------------~e 299 (398)
..+.+.+|+.+|||+|-+-+-.-++ +++..+.+.|+..||..|+|+ . + ..
T Consensus 112 ~~~sve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~ 191 (332)
T 3iv3_A 112 VDWSIKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVN 191 (332)
T ss_dssp TTCCHHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHH
T ss_pred cccCHHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHH
Confidence 3466999999999999886655421 247788888999999999988 1 1 11
Q ss_pred HHHH-H--hccCCCcEEeecc-ccC---ccccc-----Chh----hHHHHhhhhcccccccCCceE-EEecCCCCH---H
Q 015899 300 EMDR-V--LGIEGIELIGINN-RNL---ETFEV-----DNS----NTKKLLEGERGEIIRQKNIIV-VGESGLFTP---D 359 (398)
Q Consensus 300 El~r-A--l~l~Ga~iIGINn-RdL---~tf~v-----Dl~----~t~~L~~~i~~~~i~~~~v~v-VAESGI~t~---e 359 (398)
.+-+ + +++ |+|++=+.- -|. ..|.- +-+ ...++... ..+++ +..||.... +
T Consensus 192 ~a~R~~~~~el-GaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a--------~~~P~v~lsgG~~~~~fl~ 262 (332)
T 3iv3_A 192 DAMKVFSAERF-GIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAS--------TDLPYIYLSAGVSAELFQE 262 (332)
T ss_dssp HHHHHHTSGGG-CCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHT--------CSSCEEEECTTCCHHHHHH
T ss_pred HHHHHHhhcCc-CCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhc--------CCCCEEEECCCCCHHHHHH
Confidence 2222 2 365 999998861 111 12211 112 23333332 24564 467888432 2
Q ss_pred HHHHHHHcCC--CEEEEcccccCCC
Q 015899 360 DIAYVQEAGV--KAVLVGESIVKQD 382 (398)
Q Consensus 360 D~~~l~~~Ga--daVLVGeaLmk~~ 382 (398)
.++..+++|+ .||++|.++.+..
T Consensus 263 ~v~~A~~aGa~f~Gv~~GRnvwq~~ 287 (332)
T 3iv3_A 263 TLVFAHKAGAKFNGVLCGRATWAGS 287 (332)
T ss_dssp HHHHHHHHTCCCCEEEECHHHHTTH
T ss_pred HHHHHHHcCCCcceEEeeHHHHHhh
Confidence 3455677899 9999999998874
No 210
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.14 E-value=0.023 Score=60.13 Aligned_cols=47 Identities=9% Similarity=0.061 Sum_probs=42.7
Q ss_pred CceEEEecCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHhhh
Q 015899 346 NIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITGLF 392 (398)
Q Consensus 346 ~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~L~ 392 (398)
++++++-|||.|++++.++.+.| +|+|-+|.+++..+|....+++=.
T Consensus 280 ~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g~ 327 (671)
T 1ps9_A 280 SLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGR 327 (671)
T ss_dssp SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHTTC
T ss_pred CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHHcCC
Confidence 67899999999999999999998 999999999999999888776543
No 211
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=96.05 E-value=0.047 Score=56.88 Aligned_cols=90 Identities=19% Similarity=0.327 Sum_probs=66.5
Q ss_pred HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEecc---CCC--hHHHHHHHHHHHHc-------CCcEEEE
Q 015899 227 FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---VLP--DLDIRYMTKICKLL-------GLTALVE 294 (398)
Q Consensus 227 ~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa---iL~--~~~L~~Li~~a~~L-------GL~~LVE 294 (398)
.++++.+|+. +++||+.|+. .++.....+..+|||+|.+.-. .++ ...+..+.+.+..+ ++.+++.
T Consensus 332 ~~~i~~lr~~-~~~PvivKgv-~~~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~ 409 (511)
T 1kbi_A 332 WKDIEELKKK-TKLPIVIKGV-QRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD 409 (511)
T ss_dssp HHHHHHHHHH-CSSCEEEEEE-CSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE
T ss_pred HHHHHHHHHH-hCCcEEEEeC-CCHHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE
Confidence 7889999997 8999999964 4566777888999999999321 121 12344444444444 6777774
Q ss_pred --cCCHHHHHHHhccCCCcEEeecccc
Q 015899 295 --VHDEREMDRVLGIEGIELIGINNRN 319 (398)
Q Consensus 295 --Vht~eEl~rAl~l~Ga~iIGINnRd 319 (398)
|++.+++.+++.+ ||+.++|...-
T Consensus 410 GGI~~g~Dv~kaLal-GAdaV~iGr~~ 435 (511)
T 1kbi_A 410 GGVRRGTDVLKALCL-GAKGVGLGRPF 435 (511)
T ss_dssp SSCCSHHHHHHHHHH-TCSEEEECHHH
T ss_pred CCCCCHHHHHHHHHc-CCCEEEECHHH
Confidence 6899999999998 99999998533
No 212
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=96.01 E-value=0.0028 Score=58.20 Aligned_cols=78 Identities=9% Similarity=0.036 Sum_probs=58.6
Q ss_pred HHHHHHHcCCcEEE--Eec--c--CCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChH
Q 015899 202 IARSYEKGGAACLS--ILT--D--EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL 275 (398)
Q Consensus 202 iA~aY~~~GA~aIS--VLT--d--~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~ 275 (398)
-++.+.+.||+.|+ +.. . ..++.-+++.++.+++. ++||+.-..|.++.++.++..+|||+|+++.+++.+.
T Consensus 145 ea~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~--~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~p~ 222 (234)
T 1yxy_A 145 EGLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKA--GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITRPK 222 (234)
T ss_dssp HHHHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHCHH
T ss_pred HHHHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhChH
Confidence 37888889999993 221 1 11344567888888874 8999998888889999999999999999998877643
Q ss_pred H-HHHHH
Q 015899 276 D-IRYMT 281 (398)
Q Consensus 276 ~-L~~Li 281 (398)
. .++|.
T Consensus 223 ~~~~~l~ 229 (234)
T 1yxy_A 223 EIAERFI 229 (234)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3 44443
No 213
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=95.97 E-value=0.17 Score=48.19 Aligned_cols=181 Identities=15% Similarity=0.090 Sum_probs=115.0
Q ss_pred ceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccC-----CcCCC-CHHHHH---HHHhcCCCCcEEeccc
Q 015899 177 PALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDE-----KYFKG-SFENLE---AVRSAGVKCPLLCKEF 247 (398)
Q Consensus 177 ~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~-----~~F~G-s~edL~---~Ir~a~v~lPVL~KDF 247 (398)
+.||||. -+.| +..-..++|+...++||.++..-+-. .-|+| ..+.++ .+++. ..+|+++-=
T Consensus 24 ~~vIAgp----c~~~---~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~-~Gl~~~te~- 94 (262)
T 1zco_A 24 FTIIAGP----CSIE---SREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADE-YGLVTVTEV- 94 (262)
T ss_dssp CEEEEEC----SBCC---CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH-HTCEEEEEC-
T ss_pred cEEEEeC----CCCC---CHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHH-cCCcEEEee-
Confidence 7899987 2323 33356678888999999999875432 12333 244444 44444 689999744
Q ss_pred cCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHHHHhcc---CCC-cEE----eec
Q 015899 248 IVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLGI---EGI-ELI----GIN 316 (398)
Q Consensus 248 Iid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~rAl~l---~Ga-~iI----GIN 316 (398)
.|+.++..+... +|.+-+.+.-+.+.+ |++.+.++|+.+++... |.+|+..|++. .|. +++ |++
T Consensus 95 -~d~~~~~~l~~~-vd~~kIga~~~~n~~---ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~ 169 (262)
T 1zco_A 95 -MDTRHVELVAKY-SDILQIGARNSQNFE---LLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIR 169 (262)
T ss_dssp -CCGGGHHHHHHH-CSEEEECGGGTTCHH---HHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBC
T ss_pred -CCHHhHHHHHhh-CCEEEECcccccCHH---HHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 588888888888 999999998887743 34444458999999874 78998888732 243 333 222
Q ss_pred c-ccCcccccChhhHHHHhhhhcccccccCCceEEE-ec---CCCC--HHHHHHHHHcCCCEEEEccccc
Q 015899 317 N-RNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVG-ES---GLFT--PDDIAYVQEAGVKAVLVGESIV 379 (398)
Q Consensus 317 n-RdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVA-ES---GI~t--~eD~~~l~~~GadaVLVGeaLm 379 (398)
. -++....+|+.....|.+. .++++|. .+ |.+. +.-+.....+|++|++|-+-+.
T Consensus 170 ~~~~y~~~~v~L~ai~~lk~~--------~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~ 231 (262)
T 1zco_A 170 TFETATRFTLDISAVPVVKEL--------SHLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPE 231 (262)
T ss_dssp CSCCSSSSBCCTTHHHHHHHH--------BSSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSS
T ss_pred CCCCcChhhcCHHHHHHHHhh--------hCCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCC
Confidence 2 2455556777766665443 1344432 22 2221 1334556789999999998853
No 214
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=95.96 E-value=0.24 Score=48.13 Aligned_cols=135 Identities=13% Similarity=0.143 Sum_probs=99.6
Q ss_pred CCCcE-EeccccCCHHHHHHHHHcCcCEEEEeccCCChHH----HHHHHHHHHHcCCcEEEE-----------------c
Q 015899 238 VKCPL-LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD----IRYMTKICKLLGLTALVE-----------------V 295 (398)
Q Consensus 238 v~lPV-L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~----L~~Li~~a~~LGL~~LVE-----------------V 295 (398)
.++|| |.-|-.-+...+.+|..+|-+.|.++.+-++-++ .++++++|+..|+.+=.| -
T Consensus 79 ~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~y 158 (288)
T 3q94_A 79 ITVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIY 158 (288)
T ss_dssp CCSCEEEEEEEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccC
Confidence 68997 5677767788999999999999999999998543 778999999988876443 2
Q ss_pred CCHHHHHHHhccCCCcEEeecccc----C-cccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCC
Q 015899 296 HDEREMDRVLGIEGIELIGINNRN----L-ETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVK 370 (398)
Q Consensus 296 ht~eEl~rAl~l~Ga~iIGINnRd----L-~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gad 370 (398)
.|++|+.+..+..|++.+.+.-=+ + .+-..|++...++.+.+ +-..++=..||+ ..++++++.++|+.
T Consensus 159 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v------~vpLVlHGgSG~-~~e~i~~ai~~Gv~ 231 (288)
T 3q94_A 159 ADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT------GVPLVLHGGTGI-PTADIEKAISLGTS 231 (288)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH------CSCEEECCCTTC-CHHHHHHHHHTTEE
T ss_pred CCHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc------CCCEEEeCCCCC-CHHHHHHHHHcCCe
Confidence 567888777753499988764222 2 12356788877776652 222333345777 67889999999999
Q ss_pred EEEEccccc
Q 015899 371 AVLVGESIV 379 (398)
Q Consensus 371 aVLVGeaLm 379 (398)
-|=|++.+.
T Consensus 232 KiNi~Tdl~ 240 (288)
T 3q94_A 232 KINVNTENQ 240 (288)
T ss_dssp EEEECHHHH
T ss_pred EEEEChHHH
Confidence 999998764
No 215
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=95.96 E-value=0.046 Score=53.28 Aligned_cols=121 Identities=19% Similarity=0.222 Sum_probs=83.7
Q ss_pred CCHHHHHHHHHHcCCcEEEEecc---------CCcCCCCHHHHHHHHhcCCCCcEEecc--ccCCHHHHHHHHHcCcCEE
Q 015899 197 FDPVEIARSYEKGGAACLSILTD---------EKYFKGSFENLEAVRSAGVKCPLLCKE--FIVDAWQIYYARTKGADAV 265 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd---------~~~F~Gs~edL~~Ir~a~v~lPVL~KD--FIid~~QI~eAr~~GADaV 265 (398)
+++..+.++.+..||.++-+-.. ..-|.+..+.++.+|+ +++||+.|. +..++.....+..+|||+|
T Consensus 132 ~~~~~~~~a~~~~~~~a~~i~~n~~~~~~~~~~~~~~~~~~~i~~vr~--~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I 209 (332)
T 1vcf_A 132 YGRDDLLRLVEMLEADALAFHVNPLQEAVQRGDTDFRGLVERLAELLP--LPFPVMVKEVGHGLSREAALALRDLPLAAV 209 (332)
T ss_dssp CCHHHHHHHHHHHTCSEEEEECCHHHHHHTTSCCCCTTHHHHHHHHCS--CSSCEEEECSSSCCCHHHHHHHTTSCCSEE
T ss_pred cChHHHHHHHhhcCCCceeeccchHHHHhcCCCccHHHHHHHHHHHHc--CCCCEEEEecCCCCCHHHHHHHHHcCCCEE
Confidence 56777777777767776533211 1123344688888886 699999995 2267888888889999999
Q ss_pred EEeccC---------------------CC--hHHHHHHHHHHHHc-CCcEEE--EcCCHHHHHHHhccCCCcEEeecccc
Q 015899 266 LLIAAV---------------------LP--DLDIRYMTKICKLL-GLTALV--EVHDEREMDRVLGIEGIELIGINNRN 319 (398)
Q Consensus 266 LLiaai---------------------L~--~~~L~~Li~~a~~L-GL~~LV--EVht~eEl~rAl~l~Ga~iIGINnRd 319 (398)
.+.-.- ++ ...+..+.+..+.+ ++.++. -++|.+++.+++.+ ||+.+++...-
T Consensus 210 ~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~~-GAd~V~igr~~ 288 (332)
T 1vcf_A 210 DVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKALAL-GADLLAVARPL 288 (332)
T ss_dssp ECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHHHHHHH-TCSEEEECGGG
T ss_pred EeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHh-CCChHhhhHHH
Confidence 984321 21 12344444444556 688877 57899999999998 99999998544
Q ss_pred C
Q 015899 320 L 320 (398)
Q Consensus 320 L 320 (398)
+
T Consensus 289 l 289 (332)
T 1vcf_A 289 L 289 (332)
T ss_dssp H
T ss_pred H
Confidence 4
No 216
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=95.94 E-value=0.0052 Score=59.12 Aligned_cols=134 Identities=11% Similarity=0.054 Sum_probs=84.1
Q ss_pred HHHcCcCEEEEeccC----C--ChHHHHHHHHHHHHcCCcEEEEcCC-HHHHH-------------HHhc-c--C--CCc
Q 015899 257 ARTKGADAVLLIAAV----L--PDLDIRYMTKICKLLGLTALVEVHD-EREMD-------------RVLG-I--E--GIE 311 (398)
Q Consensus 257 Ar~~GADaVLLiaai----L--~~~~L~~Li~~a~~LGL~~LVEVht-~eEl~-------------rAl~-l--~--Ga~ 311 (398)
.+.+||+.|+|+.+= + +++.+..=++.|.+.||.++++|-. ++|-+ .++. + . ...
T Consensus 90 L~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~~ 169 (261)
T 1m6j_A 90 LVDCQVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKEAWKNI 169 (261)
T ss_dssp HHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHSCTGGGGGE
T ss_pred HHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHHcCCE
Confidence 455799999999983 2 4666777888899999999999974 44322 1111 1 0 011
Q ss_pred EEeeccc-cC-cccccChhhHHHHhhhhccc---ccc---cCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 312 LIGINNR-NL-ETFEVDNSNTKKLLEGERGE---IIR---QKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 312 iIGINnR-dL-~tf~vDl~~t~~L~~~i~~~---~i~---~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
+|..-.. -. +.-.-+.+...+....+|.- .+- ...+.++..|+++.-+....+...++||+|||.+-+++++
T Consensus 170 vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~ 249 (261)
T 1m6j_A 170 ILAYEPVWAIGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKKADIDGFLVGGASLDAAK 249 (261)
T ss_dssp EEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSHHH
T ss_pred EEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCCcCHhhHHHHhcCCCCCeeEecHHHhChHH
Confidence 3322100 00 00122444444443333310 010 1247899999998888888888889999999999999988
Q ss_pred hHHHHHh
Q 015899 384 PGKGITG 390 (398)
Q Consensus 384 p~~~i~~ 390 (398)
..+.++.
T Consensus 250 F~~ii~~ 256 (261)
T 1m6j_A 250 FKTIINS 256 (261)
T ss_dssp HHHHHGG
T ss_pred HHHHHHH
Confidence 8777654
No 217
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=95.93 E-value=0.055 Score=51.67 Aligned_cols=106 Identities=21% Similarity=0.272 Sum_probs=76.7
Q ss_pred HHHHHHcCcCEEEEeccC----------CChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCccc
Q 015899 254 IYYARTKGADAVLLIAAV----------LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETF 323 (398)
Q Consensus 254 I~eAr~~GADaVLLiaai----------L~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf 323 (398)
+..++.+|||+|-...-- +..+.++.|.++++++||.++.|+++...++.+.++ ++++-|..|+.+++
T Consensus 43 a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~--vd~~kIga~~~~n~ 120 (262)
T 1zco_A 43 AEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVMDTRHVELVAKY--SDILQIGARNSQNF 120 (262)
T ss_dssp HHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH--CSEEEECGGGTTCH
T ss_pred HHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh--CCEEEECcccccCH
Confidence 445556677766543311 126679999999999999999999999999999885 79999999988652
Q ss_pred ccChhhHHHHhhhhcccccccCCceEEEecCCC-CHHHHHHHH----HcCCCEEEE
Q 015899 324 EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLF-TPDDIAYVQ----EAGVKAVLV 374 (398)
Q Consensus 324 ~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~-t~eD~~~l~----~~GadaVLV 374 (398)
..-.++.+ .+.+|+..-|.. |++++.... ..|..-+.+
T Consensus 121 ----~ll~~~a~---------~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L 163 (262)
T 1zco_A 121 ----ELLKEVGK---------VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVIL 163 (262)
T ss_dssp ----HHHHHHTT---------SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEE
T ss_pred ----HHHHHHHh---------cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEE
Confidence 22333332 367888899997 999876554 557644444
No 218
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=95.93 E-value=0.0064 Score=62.01 Aligned_cols=74 Identities=15% Similarity=0.127 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHcCCcEEEEec-c------------CCcCCC------CHHHHHHHHhcCC--CCcEEeccccCCHHHHHH
Q 015899 198 DPVEIARSYEKGGAACLSILT-D------------EKYFKG------SFENLEAVRSAGV--KCPLLCKEFIVDAWQIYY 256 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLT-d------------~~~F~G------s~edL~~Ir~a~v--~lPVL~KDFIid~~QI~e 256 (398)
+..++|+..+++||++|.+-. - .+.+.| +++.+..++++ + ++||+.-..|.+..++++
T Consensus 284 ~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~-v~~~iPIIg~GGI~s~eDa~e 362 (415)
T 3i65_A 284 QKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNY-TNKQIPIIASGGIFSGLDALE 362 (415)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHH-TTTCSCEEECSSCCSHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHH-hCCCCCEEEECCCCCHHHHHH
Confidence 478999999999999998752 1 111223 24778888886 7 799999999999999999
Q ss_pred HHHcCcCEEEEeccCC
Q 015899 257 ARTKGADAVLLIAAVL 272 (398)
Q Consensus 257 Ar~~GADaVLLiaaiL 272 (398)
+..+|||+|.+..+++
T Consensus 363 ~l~aGAd~VqIgra~l 378 (415)
T 3i65_A 363 KIEAGASVCQLYSCLV 378 (415)
T ss_dssp HHHHTEEEEEESHHHH
T ss_pred HHHcCCCEEEEcHHHH
Confidence 9999999999988876
No 219
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=95.91 E-value=0.016 Score=55.35 Aligned_cols=182 Identities=9% Similarity=0.047 Sum_probs=105.1
Q ss_pred HHHHHHHHHHcCC-cEEEEeccCCcCCCCHHHHHHHHhcC--CCCcEEecccc---------CCHHHHHHHHHcCcCEEE
Q 015899 199 PVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAG--VKCPLLCKEFI---------VDAWQIYYARTKGADAVL 266 (398)
Q Consensus 199 p~~iA~aY~~~GA-~aISVLTd~~~F~Gs~edL~~Ir~a~--v~lPVL~KDFI---------id~~QI~eAr~~GADaVL 266 (398)
..++++.....-. ..+-|+.-|.|- +|..+++.. .++.|-..|.- +.+.+ .+.+||+.|+
T Consensus 22 ~~~l~~~l~~~~~~~~vev~v~Pp~~-----~L~~v~~~~~~~~i~vgAQn~~~~~GA~TGEiS~~m---L~d~G~~~Vi 93 (251)
T 2vxn_A 22 IEKLVQVFNEHTISHDVQCVVAPTFV-----HIPLVQAKLRNPKYVISAQNAIAKSGAFTGEVSMPI---LKDIGVHWVI 93 (251)
T ss_dssp HHHHHHHHHHSCCCSCCEEEEECCGG-----GHHHHHHHCCCTTEEEEESCCBSSCSSCTTCCBHHH---HHHTTCCEEE
T ss_pred HHHHHHHHHhhccccCceEEEECcHH-----HHHHHHHHhcCCCceEeecccCCCCCCCcCcCCHHH---HHHcCCCEEE
Confidence 3445555543211 124444444443 777776541 13444444421 34444 4567999999
Q ss_pred EeccC----C--ChHHHHHHHHHHHHcCCcEEEEcCC-HHHH-------------HHHhccCCC-----cEEeeccc-cC
Q 015899 267 LIAAV----L--PDLDIRYMTKICKLLGLTALVEVHD-EREM-------------DRVLGIEGI-----ELIGINNR-NL 320 (398)
Q Consensus 267 Liaai----L--~~~~L~~Li~~a~~LGL~~LVEVht-~eEl-------------~rAl~l~Ga-----~iIGINnR-dL 320 (398)
|+.+= + +++.+..=++.|.+.||.++++|-. ++|- +.++..-+. .+|..-.. -.
T Consensus 94 iGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPvWAI 173 (251)
T 2vxn_A 94 LGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAI 173 (251)
T ss_dssp ESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTGGGGGEEEEECCGGGS
T ss_pred ECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHHhCCEEEEECCHHHh
Confidence 99983 2 4666777888899999999999974 4432 122321011 12322100 00
Q ss_pred -cccccChhhHHHHhhhhccc---ccc---cCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHH
Q 015899 321 -ETFEVDNSNTKKLLEGERGE---IIR---QKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGIT 389 (398)
Q Consensus 321 -~tf~vDl~~t~~L~~~i~~~---~i~---~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~ 389 (398)
+.-.-+.+...+....+|.- .+- ...+.++..|+++.-++...+...++||+|||.+-++ ++....++
T Consensus 174 GTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~Ii~ 248 (251)
T 2vxn_A 174 GTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGASLK-PEFRDIID 248 (251)
T ss_dssp SSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS-TTHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHhcCCCCCeeeecHHHHH-HHHHHHHH
Confidence 00112344444443333310 010 1247899999998888888888899999999999999 88877664
No 220
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.90 E-value=0.014 Score=55.94 Aligned_cols=74 Identities=14% Similarity=0.079 Sum_probs=58.8
Q ss_pred CHHHHHHHHHHcCCcEEEEec--------c---C----------CcCCC------CHHHHHHHHhcCC--CCcEEecccc
Q 015899 198 DPVEIARSYEKGGAACLSILT--------D---E----------KYFKG------SFENLEAVRSAGV--KCPLLCKEFI 248 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLT--------d---~----------~~F~G------s~edL~~Ir~a~v--~lPVL~KDFI 248 (398)
+..++|+.++++|+++|.|-. | . ..+.| +.+.+..+++. + ++||+.-..|
T Consensus 173 ~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~-~~~~ipvi~~GGI 251 (311)
T 1jub_A 173 HFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTR-LKPEIQIIGTGGI 251 (311)
T ss_dssp HHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTT-SCTTSEEEEESSC
T ss_pred HHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHh-cCCCCCEEEECCC
Confidence 345669999999999998732 1 0 01123 26778888886 7 8999999999
Q ss_pred CCHHHHHHHHHcCcCEEEEeccCC
Q 015899 249 VDAWQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 249 id~~QI~eAr~~GADaVLLiaaiL 272 (398)
.++.++.++..+|||+|.+...++
T Consensus 252 ~~~~da~~~l~~GAd~V~vg~~~l 275 (311)
T 1jub_A 252 ETGQDAFEHLLCGATMLQIGTALH 275 (311)
T ss_dssp CSHHHHHHHHHHTCSEEEECHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEchHHH
Confidence 999999999999999999998887
No 221
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=95.89 E-value=0.017 Score=57.77 Aligned_cols=74 Identities=19% Similarity=0.175 Sum_probs=60.7
Q ss_pred CHHHHHHHHHHcCCcEEEEe-ccC-----------CcCCC---------CHHHHHHHHhcCC--CCcEEeccccCCHHHH
Q 015899 198 DPVEIARSYEKGGAACLSIL-TDE-----------KYFKG---------SFENLEAVRSAGV--KCPLLCKEFIVDAWQI 254 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVL-Td~-----------~~F~G---------s~edL~~Ir~a~v--~lPVL~KDFIid~~QI 254 (398)
+..++|+..+++||++|.|- |-. ..++| +++.+..+++. + ++||+.-..|.++.++
T Consensus 235 ~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~-v~~~ipvI~~GGI~s~~da 313 (367)
T 3zwt_A 235 DKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYAL-TQGRVPIIGVGGVSSGQDA 313 (367)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHH-TTTCSCEEEESSCCSHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHH-cCCCceEEEECCCCCHHHH
Confidence 57789999999999999985 210 12233 35788888887 7 8999999999999999
Q ss_pred HHHHHcCcCEEEEeccCC
Q 015899 255 YYARTKGADAVLLIAAVL 272 (398)
Q Consensus 255 ~eAr~~GADaVLLiaaiL 272 (398)
.++..+|||+|.+...++
T Consensus 314 ~~~l~~GAd~V~vgra~l 331 (367)
T 3zwt_A 314 LEKIRAGASLVQLYTALT 331 (367)
T ss_dssp HHHHHHTCSEEEESHHHH
T ss_pred HHHHHcCCCEEEECHHHH
Confidence 999999999999988875
No 222
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=95.88 E-value=0.009 Score=59.04 Aligned_cols=77 Identities=10% Similarity=0.107 Sum_probs=61.2
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCC--cCCC---------CHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEE
Q 015899 198 DPVEIARSYEKGGAACLSILTDEK--YFKG---------SFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAV 265 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~--~F~G---------s~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaV 265 (398)
+..++|+.+++.|+++|.|-.-.. .+.| .++.+..+++. + ++||+.-..|.++.++.++.. |||+|
T Consensus 145 ~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~-~~~iPVianGgI~s~eda~~~l~-GaD~V 222 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGD-FPQLTFVTNGGIRSLEEALFHLK-RVDGV 222 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHH-CTTSEEEEESSCCSHHHHHHHHT-TSSEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHh-CCCCeEEEECCcCCHHHHHHHHh-CCCEE
Confidence 578899999999999999853221 2223 57888899987 7 999999999999999999988 99999
Q ss_pred EEeccCCChHH
Q 015899 266 LLIAAVLPDLD 276 (398)
Q Consensus 266 LLiaaiL~~~~ 276 (398)
.+.-.++.+.+
T Consensus 223 ~iGRa~l~~P~ 233 (350)
T 3b0p_A 223 MLGRAVYEDPF 233 (350)
T ss_dssp EECHHHHHCGG
T ss_pred EECHHHHhCcH
Confidence 99887775433
No 223
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=95.88 E-value=0.057 Score=53.45 Aligned_cols=125 Identities=14% Similarity=0.058 Sum_probs=81.0
Q ss_pred HHHHcCcCEEEEecc-------CC-------Ch----------HHHHHHHHHHHH-cC--CcEEEEcC---------CHH
Q 015899 256 YARTKGADAVLLIAA-------VL-------PD----------LDIRYMTKICKL-LG--LTALVEVH---------DER 299 (398)
Q Consensus 256 eAr~~GADaVLLiaa-------iL-------~~----------~~L~~Li~~a~~-LG--L~~LVEVh---------t~e 299 (398)
.|..+|.|+|=|.++ .| +| .-+.++++..++ .| +.+.|-++ +.+
T Consensus 151 ~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~ 230 (343)
T 3kru_A 151 RANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINID 230 (343)
T ss_dssp HHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHH
T ss_pred hccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHH
Confidence 456789999999854 11 22 114566666654 44 45666443 233
Q ss_pred H---HHHHhccCCCcEEeec-cccCcc-----cccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcC-C
Q 015899 300 E---MDRVLGIEGIELIGIN-NRNLET-----FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAG-V 369 (398)
Q Consensus 300 E---l~rAl~l~Ga~iIGIN-nRdL~t-----f~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~G-a 369 (398)
| +-+.++-. +++|-+. .+.... -..+++...++.+. .++++++-|||.+++++.++.+.| |
T Consensus 231 ~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~--------~~iPVi~~Ggi~t~e~Ae~~l~~G~a 301 (343)
T 3kru_A 231 MMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKR--------CNIKTSAVGLITTQELAEEILSNERA 301 (343)
T ss_dssp HHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH--------HTCEEEEESSCCCHHHHHHHHHTTSC
T ss_pred HHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHh--------cCcccceeeeeeHHHHHHHHHhchhh
Confidence 3 33444433 7888774 222111 01234444444443 257999999999999999999998 9
Q ss_pred CEEEEcccccCCCChHHHHH
Q 015899 370 KAVLVGESIVKQDDPGKGIT 389 (398)
Q Consensus 370 daVLVGeaLmk~~dp~~~i~ 389 (398)
|.|.+|.+++..+|....++
T Consensus 302 D~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 302 DLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp SEEEESHHHHHCTTHHHHTC
T ss_pred HHHHHHHHHhcCCeEEEEEe
Confidence 99999999999999887765
No 224
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.88 E-value=0.014 Score=52.89 Aligned_cols=76 Identities=13% Similarity=0.138 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHcCCcEEEEe----ccCCc----CCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEec
Q 015899 198 DPVEIARSYEKGGAACLSIL----TDEKY----FKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIA 269 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVL----Td~~~----F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLia 269 (398)
++.+ ++.+++.|++.|.+. |+..+ +..+++.++.+++. +++||+.-..|.++.++.++..+|||+|+++.
T Consensus 128 t~~e-~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~-~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~ 205 (223)
T 1y0e_A 128 TVEE-AKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQS-VDAKVIAEGNVITPDMYKRVMDLGVHCSVVGG 205 (223)
T ss_dssp SHHH-HHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHH-CCSEEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHH-HHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhh-CCCCEEEecCCCCHHHHHHHHHcCCCEEEECh
Confidence 4555 666888999998752 22221 11134567777776 79999998888899999999999999999998
Q ss_pred cCCChH
Q 015899 270 AVLPDL 275 (398)
Q Consensus 270 aiL~~~ 275 (398)
+++.+.
T Consensus 206 al~~p~ 211 (223)
T 1y0e_A 206 AITRPK 211 (223)
T ss_dssp HHHCHH
T ss_pred HHcCcH
Confidence 877654
No 225
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=95.88 E-value=0.01 Score=57.69 Aligned_cols=75 Identities=13% Similarity=0.115 Sum_probs=59.7
Q ss_pred CHHHHHHHHHHcCCcEEEEecc---------------CCcCCC------CHHHHHHHHhcCC--CCcEEeccccCCHHHH
Q 015899 198 DPVEIARSYEKGGAACLSILTD---------------EKYFKG------SFENLEAVRSAGV--KCPLLCKEFIVDAWQI 254 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd---------------~~~F~G------s~edL~~Ir~a~v--~lPVL~KDFIid~~QI 254 (398)
+..++|+..++.|+++|.|-.- ...+.| +++.+..+++. + ++||+.-..|.++.++
T Consensus 226 ~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~-~~~~ipVi~~GGI~~~~da 304 (336)
T 1f76_A 226 ELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLE-LNGRLPIIGVGGIDSVIAA 304 (336)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHH-HTTSSCEEEESSCCSHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHH-hCCCCCEEEECCCCCHHHH
Confidence 5678899999999999998410 111223 24677788886 7 8999999999999999
Q ss_pred HHHHHcCcCEEEEeccCCC
Q 015899 255 YYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 255 ~eAr~~GADaVLLiaaiL~ 273 (398)
.++..+|||+|.+...++-
T Consensus 305 ~~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 305 REKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp HHHHHHTCSEEEESHHHHH
T ss_pred HHHHHCCCCEEEeeHHHHh
Confidence 9999999999999877663
No 226
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=95.85 E-value=0.016 Score=55.57 Aligned_cols=180 Identities=11% Similarity=0.083 Sum_probs=102.6
Q ss_pred HHHHHHHHHHcCC-cEEEEeccCCcCCCCHHHHHHHHhcC--CCCcEEeccc----------cCCHHHHHHHHHcCcCEE
Q 015899 199 PVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAG--VKCPLLCKEF----------IVDAWQIYYARTKGADAV 265 (398)
Q Consensus 199 p~~iA~aY~~~GA-~aISVLTd~~~F~Gs~edL~~Ir~a~--v~lPVL~KDF----------Iid~~QI~eAr~~GADaV 265 (398)
..++++....... ..+-|+.-|.| -+|..+++.. .++.|-..|. =+++.++ +.+||+.|
T Consensus 21 ~~~l~~~l~~~~~~~~vev~v~Pp~-----~~L~~v~~~~~~~~i~vgAQn~~~~~~GAfTGEiS~~mL---~d~G~~~V 92 (257)
T 2yc6_A 21 IKSHVAAIAAHKIPDSVDVVIAPSA-----VHLSTAIAANTSKQLRIAAQNVYLEGNGAWTGETSVEML---QDMGLKHV 92 (257)
T ss_dssp HHHHHHHHHTSCCCTTSEEEEECCG-----GGHHHHHHHCCCSSCEEEESCCCSSCSSSCTTCCCHHHH---HHTTCCEE
T ss_pred HHHHHHHHhhcccccCceEEEeCCH-----HHHHHHHHHhCCCCceEEeccCCCCCCcCccCccCHHHH---HHcCCCEE
Confidence 3445555544111 22334444444 4788877641 2455555542 1555554 56799999
Q ss_pred EEecc----CC--ChHHHHHHHHHHHHcCCcEEEEcC-CHHH-------------HHHHhccC-CCc------EEeeccc
Q 015899 266 LLIAA----VL--PDLDIRYMTKICKLLGLTALVEVH-DERE-------------MDRVLGIE-GIE------LIGINNR 318 (398)
Q Consensus 266 LLiaa----iL--~~~~L~~Li~~a~~LGL~~LVEVh-t~eE-------------l~rAl~l~-Ga~------iIGINnR 318 (398)
+|+.+ .+ +++.+..=++.|.+.||.++++|. +++| ++.++..- +++ +|..-..
T Consensus 93 iiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~~~vvIAYEPv 172 (257)
T 2yc6_A 93 IVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPV 172 (257)
T ss_dssp EESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHTTCHHHHHTEEEEECCG
T ss_pred EECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCChhhccCCEEEEECCH
Confidence 99998 23 466677788889999999999996 5554 11222110 111 3322110
Q ss_pred -cC-cccccChhhHHHHhhhhccc---ccc---cCCceEEEecCCCCHHHHHHHHHc-CCCEEEEcccccCCCChHHHH
Q 015899 319 -NL-ETFEVDNSNTKKLLEGERGE---IIR---QKNIIVVGESGLFTPDDIAYVQEA-GVKAVLVGESIVKQDDPGKGI 388 (398)
Q Consensus 319 -dL-~tf~vDl~~t~~L~~~i~~~---~i~---~~~v~vVAESGI~t~eD~~~l~~~-GadaVLVGeaLmk~~dp~~~i 388 (398)
-. +.-..+.+...+....+|.- .+- ...+.++..|++ +++++..+... ++||+|||.+-++++ -...+
T Consensus 173 WAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGgAsL~a~-F~~Ii 249 (257)
T 2yc6_A 173 WSIGTGVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSA-NGSNNEKLGQCPNIDGFLVGGASLKPE-FMTMI 249 (257)
T ss_dssp GGTTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESSC-CTTTHHHHHTSTTCCEEEESGGGGSTH-HHHHH
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCcc-CHHHHHHHHcCCCCCeeeecHHHHHHH-HHHHH
Confidence 00 00122344444443333221 000 135788888888 55688888877 999999999999976 44443
No 227
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.83 E-value=0.043 Score=52.65 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=70.6
Q ss_pred ceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEec-cCCcCCCCHHHHHHHHhcCC--CCcEEeccccCCHHH
Q 015899 177 PALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT-DEKYFKGSFENLEAVRSAGV--KCPLLCKEFIVDAWQ 253 (398)
Q Consensus 177 ~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLT-d~~~F~Gs~edL~~Ir~a~v--~lPVL~KDFIid~~Q 253 (398)
+.+++|+ .++.++.++. +.||+.|.|.. +.+-|.-+++.+..+++. + ++||+.-..|-++.+
T Consensus 163 l~~lvev-------------~t~ee~~~A~-~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~-v~~~~pvVaegGI~t~ed 227 (272)
T 3qja_A 163 MTALVEV-------------HTEQEADRAL-KAGAKVIGVNARDLMTLDVDRDCFARIAPG-LPSSVIRIAESGVRGTAD 227 (272)
T ss_dssp CEEEEEE-------------SSHHHHHHHH-HHTCSEEEEESBCTTTCCBCTTHHHHHGGG-SCTTSEEEEESCCCSHHH
T ss_pred CcEEEEc-------------CCHHHHHHHH-HCCCCEEEECCCcccccccCHHHHHHHHHh-CcccCEEEEECCCCCHHH
Confidence 5677777 3566765555 56999999973 334566778888888875 6 799999888888999
Q ss_pred HHHHHHcCcCEEEEeccCCChHHHHHHHHHHH
Q 015899 254 IYYARTKGADAVLLIAAVLPDLDIRYMTKICK 285 (398)
Q Consensus 254 I~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~ 285 (398)
+.+++.+|||+|+++.+++...+....++...
T Consensus 228 v~~l~~~GadgvlVGsal~~a~dp~~~~~~l~ 259 (272)
T 3qja_A 228 LLAYAGAGADAVLVGEGLVTSGDPRAAVADLV 259 (272)
T ss_dssp HHHHHHTTCSEEEECHHHHTCSCHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHH
Confidence 99999999999999999875444444444433
No 228
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=95.82 E-value=0.11 Score=47.63 Aligned_cols=117 Identities=12% Similarity=0.134 Sum_probs=74.2
Q ss_pred HHHhcCCCCcEE-ecc----ccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEc-----CCHHHH
Q 015899 232 AVRSAGVKCPLL-CKE----FIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEV-----HDEREM 301 (398)
Q Consensus 232 ~Ir~a~v~lPVL-~KD----FIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEV-----ht~eEl 301 (398)
.++++ +.||+ .-| +--|.+-+.-....++|+|+= + . ..++..|+++||.++-=+ ...+-.
T Consensus 51 ~ik~~--gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGIIs--T---k---~~~i~~Akk~GL~tIqR~FliDs~al~~~ 120 (188)
T 1vkf_A 51 ILKDR--GKTVFVDMDFVNGLGEGEEAILFVKKAGADGIIT--I---K---PKNYVVAKKNGIPAVLRFFALDSKAVERG 120 (188)
T ss_dssp HHHHT--TCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEE--S---C---HHHHHHHHHTTCCEEEEEECCSHHHHHHH
T ss_pred HHHHC--CCeEEEecCcccccCCCHHHHHHHHhcCCCEEEc--C---c---HHHHHHHHHcCCEEeeEEEEEEeHHHhhh
Confidence 33554 77775 334 446777666557779998753 1 1 457788999999994322 222222
Q ss_pred HHHhccCCCcEEeeccccCcccccChhh-HHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcc
Q 015899 302 DRVLGIEGIELIGINNRNLETFEVDNSN-TKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGE 376 (398)
Q Consensus 302 ~rAl~l~Ga~iIGINnRdL~tf~vDl~~-t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGe 376 (398)
.+.+.-..++++=+= +.. .-++++. + .++++|+.|+|.|+||+.. .++||++|..|+
T Consensus 121 ~~~I~~~kPD~iEiL----------Pg~v~p~~I~~-----v--~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~ 178 (188)
T 1vkf_A 121 IEQIETLGVDVVEVL----------PGAVAPKVARK-----I--PGRTVIAAGLVETEEEARE-ILKHVSAISTSS 178 (188)
T ss_dssp HHHHHHHTCSEEEEE----------SGGGHHHHHTT-----S--TTSEEEEESCCCSHHHHHH-HTTTSSEEEECC
T ss_pred hhhccccCCCeEeec----------CCCchHHHHHH-----h--cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCC
Confidence 222221245553332 222 3355554 2 3679999999999999999 999999999885
No 229
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=95.80 E-value=0.3 Score=44.51 Aligned_cols=190 Identities=16% Similarity=0.101 Sum_probs=117.5
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhc--CCCCcEE--ecccc--CCH--HHHHHHHHcCcCEEEE
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLL--CKEFI--VDA--WQIYYARTKGADAVLL 267 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a--~v~lPVL--~KDFI--id~--~QI~eAr~~GADaVLL 267 (398)
+.++.+..+...+.|.++|-+....-.+.-+.+++..+|+. ...+.+. .-.+. ++. ..+..|...||..|.+
T Consensus 29 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~ 108 (257)
T 3lmz_A 29 NFDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVG 108 (257)
T ss_dssp TSCHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEe
Confidence 45899999999999999999876521233466666666532 0244443 22111 111 2477788999999997
Q ss_pred eccCCChHHHHHHHHHHHHcCCcEEEEcC--------CHHHHHHHhccCCCcEEeeccccC---cccccChhhHHH-Hhh
Q 015899 268 IAAVLPDLDIRYMTKICKLLGLTALVEVH--------DEREMDRVLGIEGIELIGINNRNL---ETFEVDNSNTKK-LLE 335 (398)
Q Consensus 268 iaaiL~~~~L~~Li~~a~~LGL~~LVEVh--------t~eEl~rAl~l~Ga~iIGINnRdL---~tf~vDl~~t~~-L~~ 335 (398)
... .+.+.++.++|+..|+...+|-| +.+++.+.++. .-.-+|++ -|. .....|+....+ +.+
T Consensus 109 ~p~---~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~ll~~-~~p~vg~~-~D~~h~~~~g~d~~~~l~~~~~ 183 (257)
T 3lmz_A 109 VPN---YELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTKD-LDPRIGMC-LDVGHDLRNGCDPVADLKKYHT 183 (257)
T ss_dssp EEC---GGGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHHHHHHHHTT-SCTTEEEE-EEHHHHHHTTCCHHHHHHHHGG
T ss_pred cCC---HHHHHHHHHHHHHcCCEEEEecCCCcccccCCHHHHHHHHHh-CCCCccEE-EchhhHHHcCCCHHHHHHHhhc
Confidence 532 45699999999999999999999 46788777764 32457775 111 111234433332 222
Q ss_pred hhcccccccC-------CceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHh
Q 015899 336 GERGEIIRQK-------NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITG 390 (398)
Q Consensus 336 ~i~~~~i~~~-------~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~ 390 (398)
.+..-.+... ....+.+|-|.=.+-++.+.+.|+++.++=|......||.+.+++
T Consensus 184 ~i~~vHl~D~~~~~~~~~~~~~G~G~id~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~ 245 (257)
T 3lmz_A 184 RVFDMHIKDVTDSSKAGVGIEIGRGKIDFPALIRMMREVNYTGMCSLEYEKDMKDPFLGIAE 245 (257)
T ss_dssp GEEEEEECEESCSSTTCCEECTTSSSCCHHHHHHHHHHTTCCSEEEECCCSSTTSCHHHHHH
T ss_pred ceeEEeecccccccCCCCccccCCCccCHHHHHHHHHHcCCCceEEEEecCCcCCHHHHHHH
Confidence 2211111000 112344666666667788889999999888877566677666554
No 230
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=95.79 E-value=0.093 Score=49.30 Aligned_cols=164 Identities=18% Similarity=0.150 Sum_probs=98.7
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEe-cccc----CCH---HHHHHHHHcCcCEEEEe
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC-KEFI----VDA---WQIYYARTKGADAVLLI 268 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~-KDFI----id~---~QI~eAr~~GADaVLLi 268 (398)
.++.++++...+.|..++-| ++..+..+++..-.+.|-. =+|- ... +++.+ ...|||.|-..
T Consensus 17 ~~i~~l~~~A~~~~~~aVcv---------~p~~v~~a~~~l~gv~v~tvigFP~G~~~~~~k~~E~~~-i~~GAdEID~V 86 (226)
T 1vcv_A 17 DEAVAGARKAEELGVAAYCV---------NPIYAPVVRPLLRKVKLCVVADFPFGALPTASRIALVSR-LAEVADEIDVV 86 (226)
T ss_dssp HHHHHHHHHHHHHTCSEEEE---------CGGGHHHHGGGCSSSEEEEEESTTTCCSCHHHHHHHHHH-HTTTCSEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEE---------CHHHHHHHHHHhCCCeEEEEeCCCCCCCchHHHHHHHHH-HHCCCCEEEEe
Confidence 35556667777789998888 4556676665411233321 1331 111 46777 88999999664
Q ss_pred ccC---CCh------HHHHHHHHHHHHcCCcEEEEcC--CHHHHHHHhcc---CCCcEEeeccccCc----------ccc
Q 015899 269 AAV---LPD------LDIRYMTKICKLLGLTALVEVH--DEREMDRVLGI---EGIELIGINNRNLE----------TFE 324 (398)
Q Consensus 269 aai---L~~------~~L~~Li~~a~~LGL~~LVEVh--t~eEl~rAl~l---~Ga~iIGINnRdL~----------tf~ 324 (398)
.-+ ++. +++..+.+.|+..+|.+++|.. +.+|..++..+ .|+++|=+.. .+. +-.
T Consensus 87 inig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTST-Gf~~~~~~~~~~~~~g 165 (226)
T 1vcv_A 87 APIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSST-GFAEEAYAARQGNPVH 165 (226)
T ss_dssp CCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCC-SCCCHHHHHHTTCCSS
T ss_pred cchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCC-CCCccccccccCCCCC
Confidence 432 221 2455555555556788899986 66776665433 2999986651 111 111
Q ss_pred c---ChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHc---CCC--EEEEccc
Q 015899 325 V---DNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA---GVK--AVLVGES 377 (398)
Q Consensus 325 v---Dl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~---Gad--aVLVGea 377 (398)
- |.....+.++.. +..+.+-+.|||+|.+|+..+.++ |++ -|-+|.+
T Consensus 166 At~~dv~lm~~~i~~~------g~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 166 STPERAAAIARYIKEK------GYRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp CCHHHHHHHHHHHHHH------TCCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEES
T ss_pred CCHHHHHHHHHHHHHh------CCCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecC
Confidence 1 233333332221 245789999999999999999999 998 3344554
No 231
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=95.78 E-value=0.1 Score=52.63 Aligned_cols=165 Identities=15% Similarity=0.088 Sum_probs=107.6
Q ss_pred CHHHHHHHHHHcCCcEEEEec-----cCCcCCC-CHHH---HHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEe
Q 015899 198 DPVEIARSYEKGGAACLSILT-----DEKYFKG-SFEN---LEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLI 268 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLT-----d~~~F~G-s~ed---L~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLi 268 (398)
-..++|+...++||.+|..-+ -+..|+| +.+. |..+++. ..+|+++-= .|+.++..+... +|.+-+.
T Consensus 157 ~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~-~Gl~~~te~--~d~~~~~~l~~~-vd~lkIg 232 (385)
T 3nvt_A 157 QVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDE-YGLGVISEI--VTPADIEVALDY-VDVIQIG 232 (385)
T ss_dssp HHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH-HTCEEEEEC--CSGGGHHHHTTT-CSEEEEC
T ss_pred HHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHH-cCCEEEEec--CCHHHHHHHHhh-CCEEEEC
Confidence 356788999999999986653 2334666 3344 4444554 689999754 589999988887 9999998
Q ss_pred ccCCChHHHHHHHHHHHHcCCcEEEEc---CCHHHHHHHhcc---CCCcEEeeccc---cCcc---cccChhhHHHHhhh
Q 015899 269 AAVLPDLDIRYMTKICKLLGLTALVEV---HDEREMDRVLGI---EGIELIGINNR---NLET---FEVDNSNTKKLLEG 336 (398)
Q Consensus 269 aaiL~~~~L~~Li~~a~~LGL~~LVEV---ht~eEl~rAl~l---~Ga~iIGINnR---dL~t---f~vDl~~t~~L~~~ 336 (398)
+..+.+. .|++.+...|..+++.. .|.+|+..|++. .|..-|.+-.| .+.+ ..+|+.....|.+.
T Consensus 233 s~~~~n~---~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~ 309 (385)
T 3nvt_A 233 ARNMQNF---ELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKE 309 (385)
T ss_dssp GGGTTCH---HHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHH
T ss_pred cccccCH---HHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHh
Confidence 8888763 56677778999999998 678888777643 25432222222 3333 35677665555432
Q ss_pred hcccccccCCceEEEe--cCCCCH----HHHHHHHHcCCCEEEEccc
Q 015899 337 ERGEIIRQKNIIVVGE--SGLFTP----DDIAYVQEAGVKAVLVGES 377 (398)
Q Consensus 337 i~~~~i~~~~v~vVAE--SGI~t~----eD~~~l~~~GadaVLVGea 377 (398)
.+++|++- -|+..+ .-......+||+|++|-.-
T Consensus 310 --------~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H 348 (385)
T 3nvt_A 310 --------THLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVH 348 (385)
T ss_dssp --------BSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBC
T ss_pred --------cCCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEec
Confidence 24555553 122111 2244567889999999873
No 232
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=95.78 E-value=0.47 Score=47.26 Aligned_cols=183 Identities=11% Similarity=0.058 Sum_probs=115.3
Q ss_pred CceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEe-----c--cCC--cCCC----------------CHHHH
Q 015899 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSIL-----T--DEK--YFKG----------------SFENL 230 (398)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVL-----T--d~~--~F~G----------------s~edL 230 (398)
.+.||||+=-. ..| .-.-..+++.+..++||+|+.-- | -+. .|++ +.+.+
T Consensus 19 ~~~iIAe~g~N--H~g---s~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~ 93 (349)
T 2wqp_A 19 EPLIICEIGIN--HEG---SLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDE 93 (349)
T ss_dssp CCEEEEEEETT--TTT---CHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHH
T ss_pred ceEEEEecCCc--ccC---CHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHH
Confidence 47899998211 112 22245677889999999999875 1 122 2663 33444
Q ss_pred HH---HHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEc--CCHHHHHHHh
Q 015899 231 EA---VRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEV--HDEREMDRVL 305 (398)
Q Consensus 231 ~~---Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEV--ht~eEl~rAl 305 (398)
.. .++. ..+|+++-=| |+.++.....+|+|++=+.+.-+.+- .|++.+.+.|..+++-. .|.+|++.|+
T Consensus 94 ~~L~~~~~~-~Gi~~~st~~--d~~svd~l~~~~v~~~KI~S~~~~n~---~LL~~va~~gkPviLstGmat~~Ei~~Av 167 (349)
T 2wqp_A 94 IKLKEYVES-KGMIFISTLF--SRAAALRLQRMDIPAYKIGSGECNNY---PLIKLVASFGKPIILSTGMNSIESIKKSV 167 (349)
T ss_dssp HHHHHHHHH-TTCEEEEEEC--SHHHHHHHHHHTCSCEEECGGGTTCH---HHHHHHHTTCSCEEEECTTCCHHHHHHHH
T ss_pred HHHHHHHHH-hCCeEEEeeC--CHHHHHHHHhcCCCEEEECcccccCH---HHHHHHHhcCCeEEEECCCCCHHHHHHHH
Confidence 44 4554 6899988765 89999999899999999999888773 35566666788887766 4888888876
Q ss_pred cc---CCCcEE---eeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccc
Q 015899 306 GI---EGIELI---GINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 378 (398)
Q Consensus 306 ~l---~Ga~iI---GINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 378 (398)
+. .|.+++ ++.++.-....+|+.....|.+.. .+++|+-.+-=....-......+||+ +|=.-+
T Consensus 168 e~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f-------~~lpVg~sdHt~G~~~~~AAvAlGA~--iIEkH~ 237 (349)
T 2wqp_A 168 EIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAF-------PDAIIGLSDHTLDNYACLGAVALGGS--ILERHF 237 (349)
T ss_dssp HHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHC-------TTSEEEEECCSSSSHHHHHHHHHTCC--EEEEEB
T ss_pred HHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHC-------CCCCEEeCCCCCcHHHHHHHHHhCCC--EEEeCC
Confidence 53 244544 343333333567777766654431 13455443322234444555678999 555444
No 233
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=95.76 E-value=0.044 Score=65.50 Aligned_cols=171 Identities=16% Similarity=0.129 Sum_probs=99.7
Q ss_pred HHHHHHHHHcCCcEEEEeccCCcCCCCHHHH----HHHHhcCCC--CcEEeccccCCHH----H---HHHHHHcCcCE--
Q 015899 200 VEIARSYEKGGAACLSILTDEKYFKGSFENL----EAVRSAGVK--CPLLCKEFIVDAW----Q---IYYARTKGADA-- 264 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL----~~Ir~a~v~--lPVL~KDFIid~~----Q---I~eAr~~GADa-- 264 (398)
.++|-+..++|.-+ +|+--.+ .+++.| +.+|+. ++ -|+=+.=+..+++ | +..+++.|...
T Consensus 604 ~~lvaAvsnAGglg--~l~~~~~--~~~e~l~~~I~~~~~~-t~~~~~~gvN~~~~~~~~~~~~~~~~~~~~~~gv~i~~ 678 (2051)
T 2uv8_G 604 PDFVAATTNAGYTI--ELAGGGY--FSAAGMTAAIDSVVSQ-IEKGSTFGINLIYVNPFMLQWGIPLIKELRSKGYPIQF 678 (2051)
T ss_dssp HHHHHHHHHTTCEE--EEEGGGC--CSHHHHHHHHHHHHHH-SCTTCCEEEEEETTCTTHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCcEE--EEccCCC--CCHHHHHHHHHHHHHh-cCCCCceEEEEeecChhhhhhhHHHHHHHHHcCCCcce
Confidence 45677777766433 4432222 245444 445553 33 4543322223332 2 45667899888
Q ss_pred EEEeccCCChHHHHHHHHHHHHcCCcEEEEcCC----HHHHHHHhccCCCcEE---eecccc--CcccccChh-hHHHHh
Q 015899 265 VLLIAAVLPDLDIRYMTKICKLLGLTALVEVHD----EREMDRVLGIEGIELI---GINNRN--LETFEVDNS-NTKKLL 334 (398)
Q Consensus 265 VLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht----~eEl~rAl~l~Ga~iI---GINnRd--L~tf~vDl~-~t~~L~ 334 (398)
|.+.+-.=+ ++..+++...+|+.++.-+-+ ...+.++.++ |++.+ -+..-. -+.-.-|+. .+..|+
T Consensus 679 v~~~ag~p~---~~~~~~~i~~lG~~vi~~~~~~~~a~~~~~~~~~~-g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~ 754 (2051)
T 2uv8_G 679 LTIGAGVPS---LEVASEYIETLGLKYLGLKPGSIDAISQVINIAKA-HPNFPIALQWTGGRGGGHHSFEDAHTPMLQMY 754 (2051)
T ss_dssp EEEESSCCC---HHHHHHHHHHSCCSCEEECCCSHHHHHHHHHHHHH-STTSCEEEEECCSSCSEECCSCCSSHHHHHHH
T ss_pred EEecCCCCc---hhhHHHHHHHcCCEEEEecCchHHHHHHHHHHHHh-CCCceeEEEEEccCcCCCCCcccccccHHHHH
Confidence 766554333 344555666779999885553 3333555665 77762 221110 000001222 234455
Q ss_pred hhhcccccccCCceEEEecCCCCHHHHHHHH-----------HcCCCEEEEcccccCCCC
Q 015899 335 EGERGEIIRQKNIIVVGESGLFTPDDIAYVQ-----------EAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 335 ~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~-----------~~GadaVLVGeaLmk~~d 383 (398)
+.++. ..++++|+.|||.+.+++..++ .+||+||++|+.+|-...
T Consensus 755 ~~v~~----~~~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~E 810 (2051)
T 2uv8_G 755 SKIRR----HPNIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKE 810 (2051)
T ss_dssp HHHTT----CTTBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTT
T ss_pred HHHHh----cCCceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCcc
Confidence 55432 1379999999999999999999 899999999999997654
No 234
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=95.76 E-value=0.026 Score=53.90 Aligned_cols=114 Identities=18% Similarity=0.166 Sum_probs=71.8
Q ss_pred CCHHHHHHHHHHcCCcEEEEec----------------------------cCC------cCCCCHHHHHHHHhcCCCCcE
Q 015899 197 FDPVEIARSYEKGGAACLSILT----------------------------DEK------YFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLT----------------------------d~~------~F~Gs~edL~~Ir~a~v~lPV 242 (398)
.++.+.. .+.+.||+.|.+-- ... .+..+++.++.+++. +++||
T Consensus 133 ~~~~~~~-~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~-~~~pv 210 (297)
T 2zbt_A 133 RNLGEAL-RRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDH-GRLPV 210 (297)
T ss_dssp SSHHHHH-HHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHH-SSCSS
T ss_pred CCHHHHH-HHHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHh-cCCCc
Confidence 4566644 45788999997741 111 244567888888886 78998
Q ss_pred E--eccccCCHHHHHHHHHcCcCEEEEeccCCC---h-HHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeec
Q 015899 243 L--CKEFIVDAWQIYYARTKGADAVLLIAAVLP---D-LDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGIN 316 (398)
Q Consensus 243 L--~KDFIid~~QI~eAr~~GADaVLLiaaiL~---~-~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGIN 316 (398)
+ .-..|-++.++.+++.+|||+|+++.+++. + ..+++|.+..+. ..+.+.+....+.-|..+.+|+
T Consensus 211 i~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~~dp~~~~~~l~~~i~~--------~~~~~~~~~~~~~~g~~~~~~~ 282 (297)
T 2zbt_A 211 VNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVRAVAH--------YNDPEVLAEVSEDLGEPMVGIN 282 (297)
T ss_dssp CEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGSSCHHHHHHHHHHHHHT--------TTCHHHHHHHHTTCCCCC----
T ss_pred EEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCCCCHHHHHHHHHHHHHH--------HhchHhhhHHHHhcCceeEEee
Confidence 7 655555999999999999999999999883 2 225555544332 2345565555555566677777
Q ss_pred cccC
Q 015899 317 NRNL 320 (398)
Q Consensus 317 nRdL 320 (398)
.+.+
T Consensus 283 ~~~~ 286 (297)
T 2zbt_A 283 LDQL 286 (297)
T ss_dssp ----
T ss_pred chhc
Confidence 5554
No 235
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=95.75 E-value=0.11 Score=47.18 Aligned_cols=105 Identities=10% Similarity=0.126 Sum_probs=71.9
Q ss_pred HHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCC---cEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChh
Q 015899 252 WQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGL---TALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNS 328 (398)
Q Consensus 252 ~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL---~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~ 328 (398)
.++.++...|+|.|.+...-++..++.++++..+..+. .+++. +.++.+.++ |++.|-+...+. ...
T Consensus 33 ~~~~~~~~~G~~~v~lr~~~~~~~~~~~~~~~l~~~~~~~~~l~v~----~~~~~a~~~-gad~v~l~~~~~-----~~~ 102 (221)
T 1yad_A 33 ARIIITIQNEVDFIHIRERSKSAADILKLLDLIFEGGIDKRKLVMN----GRVDIALFS-TIHRVQLPSGSF-----SPK 102 (221)
T ss_dssp HHHHHHHGGGCSEEEECCTTSCHHHHHHHHHHHHHTTCCGGGEEEE----SCHHHHHTT-TCCEEEECTTSC-----CHH
T ss_pred HHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHhcCcCCeEEEe----ChHHHHHHc-CCCEEEeCCCcc-----CHH
Confidence 45777788899999887666777777778777776543 36665 345677887 999987764332 222
Q ss_pred hHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccc
Q 015899 329 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 378 (398)
Q Consensus 329 ~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 378 (398)
...++. + +..+.. .++|++++..+...|+|.+++|..+
T Consensus 103 ~~~~~~---------~-~~~ig~--sv~t~~~~~~a~~~gaD~i~~~~~f 140 (221)
T 1yad_A 103 QIRARF---------P-HLHIGR--SVHSLEEAVQAEKEDADYVLFGHVF 140 (221)
T ss_dssp HHHHHC---------T-TCEEEE--EECSHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHC---------C-CCEEEE--EcCCHHHHHHHHhCCCCEEEECCcc
Confidence 222221 2 333322 4689999999999999999998743
No 236
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=95.75 E-value=0.019 Score=53.28 Aligned_cols=65 Identities=15% Similarity=0.159 Sum_probs=55.1
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCC--CHHHHHHHHhcCC--CCcEEeccccCCHHHHHHHHHcCcCEE
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKG--SFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADAV 265 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~G--s~edL~~Ir~a~v--~lPVL~KDFIid~~QI~eAr~~GADaV 265 (398)
+..++|+..+++||++|.+.| +|+.| +++++..+++. + ++||+.-..|.++.+..+...+|||.|
T Consensus 133 ~~~~~a~~a~eaGad~I~tst--g~~~gga~~~~i~~v~~~-v~~~ipVia~GGI~t~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 133 EIKKAVEICIEAGADFIKTST--GFAPRGTTLEEVRLIKSS-AKGRIKVKASGGIRDLETAISMIEAGADRI 201 (225)
T ss_dssp HHHHHHHHHHHHTCSEEECCC--SCSSSCCCHHHHHHHHHH-HTTSSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHhCCCEEEECC--CCCCCCCCHHHHHHHHHH-hCCCCcEEEECCCCCHHHHHHHHHhCchHH
Confidence 467889999999999995555 55545 88999999886 5 799999999999999999999999954
No 237
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=95.75 E-value=0.034 Score=53.28 Aligned_cols=138 Identities=14% Similarity=0.204 Sum_probs=85.2
Q ss_pred CCHHHHHHHHHcCcCEEEEeccC----C--ChHHHHHHHHHHHHcCCcEEEEcC-CHHH-------------HHHHhccC
Q 015899 249 VDAWQIYYARTKGADAVLLIAAV----L--PDLDIRYMTKICKLLGLTALVEVH-DERE-------------MDRVLGIE 308 (398)
Q Consensus 249 id~~QI~eAr~~GADaVLLiaai----L--~~~~L~~Li~~a~~LGL~~LVEVh-t~eE-------------l~rAl~l~ 308 (398)
|.+.++ +.+|++.|+|+.+= + +++.+..=++.|.+.||.++++|. +++| ++.++..-
T Consensus 80 iS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~ 156 (256)
T 1aw2_A 80 MSPAML---KEFGATHIIIGHSERREYHAESDEFVAKKFAFLKENGLTPVLCIGESDAQNEAGETMAVCARQLDAVINTQ 156 (256)
T ss_dssp CCHHHH---HHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred cCHHHH---HHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcC
Confidence 555555 45699999999983 2 455566667888899999999997 4444 12222100
Q ss_pred CCc-----EEeeccc-cC-cccccChhhHHHHhhhhcccc--cc---cCCceEEEecCCCCHHHHHHHHHc-CCCEEEEc
Q 015899 309 GIE-----LIGINNR-NL-ETFEVDNSNTKKLLEGERGEI--IR---QKNIIVVGESGLFTPDDIAYVQEA-GVKAVLVG 375 (398)
Q Consensus 309 Ga~-----iIGINnR-dL-~tf~vDl~~t~~L~~~i~~~~--i~---~~~v~vVAESGI~t~eD~~~l~~~-GadaVLVG 375 (398)
+++ +|..-.. -. +.-.-+.+...+....+|.-. +- ...+.++..|+++. +++..+... ++||+|||
T Consensus 157 ~~~~~~~vvIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV~~-~N~~~l~~~~diDG~LVG 235 (256)
T 1aw2_A 157 GVEALEGAIIAYEPIWAIGTGKAATAEDAQRIHAQIRAHIAEKSEAVAKNVVIQYGGSVKP-ENAAAYFAQPDIDGALVG 235 (256)
T ss_dssp CGGGGTTCEEEECCTTTTTSSCCCCHHHHHHHHHHHHHHHHTTCHHHHHHCEEEECSCCCT-TTHHHHTTSTTCCEEEES
T ss_pred CHHHcCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCH-HHHHHHHcCCCCCeeeec
Confidence 112 3332210 00 001224444444444333210 00 12467888888855 999999888 99999999
Q ss_pred ccccCCCChHHHHHh
Q 015899 376 ESIVKQDDPGKGITG 390 (398)
Q Consensus 376 eaLmk~~dp~~~i~~ 390 (398)
.+-+++++..+.++.
T Consensus 236 gAsL~a~~F~~Ii~~ 250 (256)
T 1aw2_A 236 GAALDAKSFAAIAKA 250 (256)
T ss_dssp GGGGCHHHHHHHHHH
T ss_pred HHHhChHHHHHHHHH
Confidence 999999888777654
No 238
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=95.73 E-value=0.052 Score=51.89 Aligned_cols=137 Identities=13% Similarity=0.120 Sum_probs=84.3
Q ss_pred CCHHHHHHHHHcCcCEEEEeccC----C--ChHHHHHHHHHHHHcCCcEEEEcCC-HHH-------------HHHHhccC
Q 015899 249 VDAWQIYYARTKGADAVLLIAAV----L--PDLDIRYMTKICKLLGLTALVEVHD-ERE-------------MDRVLGIE 308 (398)
Q Consensus 249 id~~QI~eAr~~GADaVLLiaai----L--~~~~L~~Li~~a~~LGL~~LVEVht-~eE-------------l~rAl~l~ 308 (398)
+.+.++ +.+||+.|+|+.+= + +++.+..=++.|.+.||.++++|.. ++| +..++..-
T Consensus 77 iS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~ 153 (252)
T 2btm_A 77 VSPVML---KDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKALAGL 153 (252)
T ss_dssp CCHHHH---HHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred CCHHHH---HHcCCCEEEeCchhcccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcC
Confidence 555565 45699999999983 2 4455666678888999999999974 442 23333210
Q ss_pred CCc-----EEeeccc-cC-cccccChhhHHHHhhhhccc---ccc---cCCceEEEecCCCCHHHHHHHH-HcCCCEEEE
Q 015899 309 GIE-----LIGINNR-NL-ETFEVDNSNTKKLLEGERGE---IIR---QKNIIVVGESGLFTPDDIAYVQ-EAGVKAVLV 374 (398)
Q Consensus 309 Ga~-----iIGINnR-dL-~tf~vDl~~t~~L~~~i~~~---~i~---~~~v~vVAESGI~t~eD~~~l~-~~GadaVLV 374 (398)
+++ +|..-.. -. +.-.-+.+...+....+|.- .+- ...+.++..|+++. +++..++ ..++||+||
T Consensus 154 ~~~~~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~-~N~~~l~~~~diDG~LV 232 (252)
T 2btm_A 154 TPEQVKQAVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKP-DNIRDFLAQQQIDGALV 232 (252)
T ss_dssp CHHHHTTCEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEEEEESSCCT-TTHHHHHTSTTCCEEEE
T ss_pred CHHHcCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCH-HHHHHHHcCCCCCeeEe
Confidence 112 3432210 00 01122344444433333221 000 13578889999955 8888887 779999999
Q ss_pred cccccCCCChHHHHH
Q 015899 375 GESIVKQDDPGKGIT 389 (398)
Q Consensus 375 GeaLmk~~dp~~~i~ 389 (398)
|.+-+++++..+.++
T Consensus 233 GgAsL~a~~F~~Ii~ 247 (252)
T 2btm_A 233 GGASLEPASFLQLVE 247 (252)
T ss_dssp SGGGSSHHHHHHHHH
T ss_pred cHHHhChHHHHHHHH
Confidence 999999888777665
No 239
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=95.69 E-value=0.02 Score=56.49 Aligned_cols=90 Identities=24% Similarity=0.168 Sum_probs=69.3
Q ss_pred CHHHHHHHHHHcCCcEEEEec---cCCc----CC-CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEe
Q 015899 198 DPVEIARSYEKGGAACLSILT---DEKY----FK-GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLI 268 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLT---d~~~----F~-Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLi 268 (398)
+..++|+.+++.|++.|+|-. .+.. .. -..+.+..+|+. +++||+.-..|.++.+..++...| ||.|.+.
T Consensus 240 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 240 DTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKR-VGLRTGAVGLITTPEQAETLLQAGSADLVLLG 318 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHH-HCCEEEECSSCCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHH-cCceEEEECCCCCHHHHHHHHHCCCceEEEec
Confidence 567889999999999999973 1110 11 256778889987 899999999989999999999999 9999998
Q ss_pred ccCCChHHHHHHHHHHHHcCCc
Q 015899 269 AAVLPDLDIRYMTKICKLLGLT 290 (398)
Q Consensus 269 aaiL~~~~L~~Li~~a~~LGL~ 290 (398)
-.++.+.++-. +.++.+|.+
T Consensus 319 R~~lanPdl~~--k~~~~l~~~ 338 (349)
T 3hgj_A 319 RVLLRDPYFPL--RAAKALGVA 338 (349)
T ss_dssp THHHHCTTHHH--HHHHHTTCC
T ss_pred HHHHhCchHHH--HHHHHCCCC
Confidence 88886655432 334567754
No 240
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=95.65 E-value=0.026 Score=55.03 Aligned_cols=95 Identities=19% Similarity=0.160 Sum_probs=70.6
Q ss_pred CccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEec-cCCcC---CCCHHHHHHHHh
Q 015899 160 ARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT-DEKYF---KGSFENLEAVRS 235 (398)
Q Consensus 160 ~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLT-d~~~F---~Gs~edL~~Ir~ 235 (398)
+..+.+.++.. ...||.-+ +..+.|+.+++.|+++|.|-. +.+.. ..+++.+..+++
T Consensus 99 p~~~i~~l~~~-----g~~v~~~v--------------~~~~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~ 159 (332)
T 2z6i_A 99 PSKYMERFHEA-----GIIVIPVV--------------PSVALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVAT 159 (332)
T ss_dssp GGGTHHHHHHT-----TCEEEEEE--------------SSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHH
T ss_pred hHHHHHHHHHc-----CCeEEEEe--------------CCHHHHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHH
Confidence 45677777753 24566544 224568888899999999842 21222 124677788888
Q ss_pred cCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCCh
Q 015899 236 AGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (398)
Q Consensus 236 a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~ 274 (398)
. +++||+.-..|.++.++.++...|||+|.+..+++..
T Consensus 160 ~-~~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~ 197 (332)
T 2z6i_A 160 A-ISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVA 197 (332)
T ss_dssp H-CSSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTB
T ss_pred h-cCCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcC
Confidence 6 8999999999999999999999999999999887743
No 241
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=95.61 E-value=0.059 Score=50.87 Aligned_cols=158 Identities=16% Similarity=0.171 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHh-cCCCCcEEe-ccccC--CH-----HHHHHHHHcCcCEEEEe
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRS-AGVKCPLLC-KEFIV--DA-----WQIYYARTKGADAVLLI 268 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~-a~v~lPVL~-KDFIi--d~-----~QI~eAr~~GADaVLLi 268 (398)
+..++++...++|+.++-| ++.++..++. .+.++.|-. =+|-. ++ +++.+|...|||.|-+.
T Consensus 30 ~i~~lc~eA~~~~~~aVcV---------~p~~v~~a~~l~~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdEIDmV 100 (231)
T 3ndo_A 30 DVTALVDEAADLGVFAVCV---------SPPLVSVAAGVAPSGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATEIDMV 100 (231)
T ss_dssp HHHHHHHHHHHHTCSEEEE---------CGGGHHHHHHHCCTTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHhCCcEEEE---------CHHHHHHHHHhcCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEE
Confidence 4445566677789998887 2233343331 123343321 13321 11 36778899999998765
Q ss_pred ccC---CC--h----HHHHHHHHHHHHcCCcEEEEcC------CHHHHHHHhcc---CCCcEEeeccccCc-ccccChhh
Q 015899 269 AAV---LP--D----LDIRYMTKICKLLGLTALVEVH------DEREMDRVLGI---EGIELIGINNRNLE-TFEVDNSN 329 (398)
Q Consensus 269 aai---L~--~----~~L~~Li~~a~~LGL~~LVEVh------t~eEl~rAl~l---~Ga~iIGINnRdL~-tf~vDl~~ 329 (398)
.-+ ++ . +++..+.+.|+..-+.+++|.. |.+|+.++.++ .|+++|=+.. .+. +-.-.++.
T Consensus 101 inig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTST-Gf~~~~gAt~ed 179 (231)
T 3ndo_A 101 IDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTST-GFHPSGGASVQA 179 (231)
T ss_dssp CCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCC-SCCTTCSCCHHH
T ss_pred eehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCC-CCCCCCCCCHHH
Confidence 442 22 1 2344444444433467788874 66777665432 3999986652 121 11112222
Q ss_pred HHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCE
Q 015899 330 TKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKA 371 (398)
Q Consensus 330 t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gada 371 (398)
..-+.+. ....+.+-+.|||+|.+|+..+.++|++.
T Consensus 180 v~lm~~~------v~~~v~VKaaGGIrt~~~a~~~i~aGa~R 215 (231)
T 3ndo_A 180 VEIMART------VGERLGVKASGGIRTAEQAAAMLDAGATR 215 (231)
T ss_dssp HHHHHHH------HTTTSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHH------hCCCceEEEeCCCCCHHHHHHHHHhcchh
Confidence 2222222 12467899999999999999999999994
No 242
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=95.60 E-value=0.033 Score=52.48 Aligned_cols=60 Identities=20% Similarity=0.174 Sum_probs=50.5
Q ss_pred CCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChH-HHHHHHHHHH
Q 015899 224 KGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL-DIRYMTKICK 285 (398)
Q Consensus 224 ~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~-~L~~Li~~a~ 285 (398)
.|+++.++.+|+. + ++||.....|.++.|+.++. .|||+|.++.++..+. .+.++++..+
T Consensus 165 ~~~~~~i~~i~~~-~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~p~~~~~~v~a~~ 226 (228)
T 3vzx_A 165 LGDIEAVKKTKAV-LETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYEDFDRALKTVAAVK 226 (228)
T ss_dssp CCCHHHHHHHHHH-CSSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHh-cCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcCHHHHHHHHHHHh
Confidence 3689999999997 8 79999999999999999987 7999999999887553 4677776543
No 243
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=95.60 E-value=0.022 Score=54.13 Aligned_cols=69 Identities=28% Similarity=0.208 Sum_probs=54.5
Q ss_pred HHHHHHHHcCCcEEEEeccCCcCC-----CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCC
Q 015899 201 EIARSYEKGGAACLSILTDEKYFK-----GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 201 ~iA~aY~~~GA~aISVLTd~~~F~-----Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (398)
+.++...+.|++.|-.+ ...++ .+++.|+.+++. +++||+....|-++.++.++..+|||+|+++.++.
T Consensus 138 ~~a~~~~~~gad~v~~~--~~~~Gt~~~~~~~~~l~~i~~~-~~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~ 211 (264)
T 1xm3_A 138 VLARKLEELGVHAIMPG--ASPIGSGQGILNPLNLSFIIEQ-AKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVS 211 (264)
T ss_dssp HHHHHHHHHTCSCBEEC--SSSTTCCCCCSCHHHHHHHHHH-CSSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHhCCCEEEEC--CcccCCCCCCCCHHHHHHHHhc-CCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHh
Confidence 45777788899988221 11111 148899999986 89999999888899999999999999999999876
No 244
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.54 E-value=0.018 Score=51.79 Aligned_cols=73 Identities=18% Similarity=0.141 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCc----CC-CCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEeccC
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKY----FK-GSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~----F~-Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (398)
++.+.++.+.+.|++.|.+. +.| |. ..++.++.+|+. + ++||+.-..| .+.++.++..+|||+|+++.++
T Consensus 115 t~~~~~~~~~~~g~d~i~v~--~g~~g~~~~~~~~~~i~~l~~~-~~~~~i~~~gGI-~~~~~~~~~~~Gad~vvvGsai 190 (211)
T 3f4w_A 115 DLPARVRLLEEAGADMLAVH--TGTDQQAAGRKPIDDLITMLKV-RRKARIAVAGGI-SSQTVKDYALLGPDVVIVGSAI 190 (211)
T ss_dssp SHHHHHHHHHHHTCCEEEEE--CCHHHHHTTCCSHHHHHHHHHH-CSSCEEEEESSC-CTTTHHHHHTTCCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEc--CCCcccccCCCCHHHHHHHHHH-cCCCcEEEECCC-CHHHHHHHHHcCCCEEEECHHH
Confidence 67888999999999998764 332 22 267889999886 5 8999875555 6889999999999999999887
Q ss_pred CCh
Q 015899 272 LPD 274 (398)
Q Consensus 272 L~~ 274 (398)
...
T Consensus 191 ~~~ 193 (211)
T 3f4w_A 191 THA 193 (211)
T ss_dssp HTC
T ss_pred cCC
Confidence 753
No 245
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=95.50 E-value=0.056 Score=51.71 Aligned_cols=159 Identities=12% Similarity=0.134 Sum_probs=95.9
Q ss_pred CHHHHHHHHhcC-----CCCcEEeccc----------cCCHHHHHHHHHcCcCEEEEeccC----C--ChHHHHHHHHHH
Q 015899 226 SFENLEAVRSAG-----VKCPLLCKEF----------IVDAWQIYYARTKGADAVLLIAAV----L--PDLDIRYMTKIC 284 (398)
Q Consensus 226 s~edL~~Ir~a~-----v~lPVL~KDF----------Iid~~QI~eAr~~GADaVLLiaai----L--~~~~L~~Li~~a 284 (398)
.+-+|..+++.. .++.|=..|. =+++.++ +.+||+.|+|+.+= + +++.+..=++.|
T Consensus 43 p~~~L~~v~~~~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~V~~Kv~~A 119 (254)
T 3m9y_A 43 PAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVAL---ADLGVKYVVIGHSERRELFHETDEEINKKAHAI 119 (254)
T ss_dssp CHHHHHHHHHHHHTTSSTTCEEEESCCCSSSSBSCTTCCCHHHH---HHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCCcceEEecccccccCCCccCcCCHHHH---HHcCCCEEEECcccccCccCCCHHHHHHHHHHH
Confidence 455788776541 2466655551 1555554 55799999999983 3 455577767889
Q ss_pred HHcCCcEEEEcC-CHH-------------HHHHHhccCCCc-----EEeeccc-cC-cccccChhhHHHHhhhhcc---c
Q 015899 285 KLLGLTALVEVH-DER-------------EMDRVLGIEGIE-----LIGINNR-NL-ETFEVDNSNTKKLLEGERG---E 340 (398)
Q Consensus 285 ~~LGL~~LVEVh-t~e-------------El~rAl~l~Ga~-----iIGINnR-dL-~tf~vDl~~t~~L~~~i~~---~ 340 (398)
.+.||.++++|. +++ ++..++..-+++ +|..-.. -. +.-..+.+...+....+|. .
T Consensus 120 l~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~vvIAYEPvWAIGTG~~At~e~aqevh~~IR~~l~~ 199 (254)
T 3m9y_A 120 FKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIAD 199 (254)
T ss_dssp HHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHCEEEECCGGGCC--CCCCHHHHHHHHHHHHHHHHH
T ss_pred HHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHHhcCCHHHhCCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999997 444 344444310112 3322210 00 0111234444443322222 0
Q ss_pred cc---ccCCceEEEecCCCCHHHHHHHH-HcCCCEEEEcccccCCCChHHHH
Q 015899 341 II---RQKNIIVVGESGLFTPDDIAYVQ-EAGVKAVLVGESIVKQDDPGKGI 388 (398)
Q Consensus 341 ~i---~~~~v~vVAESGI~t~eD~~~l~-~~GadaVLVGeaLmk~~dp~~~i 388 (398)
.+ ....+.++..|++ +++++..+. ..++||+|||.+-.++++-...+
T Consensus 200 ~~~~~~a~~~rIlYGGSV-~~~N~~~l~~~~diDG~LVGgASL~~~~F~~Ii 250 (254)
T 3m9y_A 200 LSSKEVSEATRIQYGGSV-KPNNIKEYMAQTDIDGALVGGASLKVEDFVQLL 250 (254)
T ss_dssp HSCHHHHTTSEEEECSCC-CTTTHHHHHTSTTCCEEEESGGGSSHHHHHHHH
T ss_pred hcChhhcCCccEEEcCCc-CHHHHHHHHcCCCCCeEEeeHHhhCHHHHHHHH
Confidence 01 0135788899999 999999988 77999999999999876544443
No 246
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=95.50 E-value=0.062 Score=51.31 Aligned_cols=156 Identities=11% Similarity=0.036 Sum_probs=92.9
Q ss_pred HHHHHHhcC--CCCcEEecccc---------CCHHHHHHHHHcCcCEEEEeccC----C--ChHHHHHHHHHHHHcCCcE
Q 015899 229 NLEAVRSAG--VKCPLLCKEFI---------VDAWQIYYARTKGADAVLLIAAV----L--PDLDIRYMTKICKLLGLTA 291 (398)
Q Consensus 229 dL~~Ir~a~--v~lPVL~KDFI---------id~~QI~eAr~~GADaVLLiaai----L--~~~~L~~Li~~a~~LGL~~ 291 (398)
+|..+++.. .++.|-..|.- +.+.+ .+.+||+.|+|+.+= + +++.+..=++.|.+.||.+
T Consensus 47 ~L~~v~~~~~~~~i~vgAQn~~~~~GA~TGEiS~~m---L~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~p 123 (250)
T 2j27_A 47 HLAMTKERLSHPKFVIAAQNAIAKSGAFTGEVSLPI---LKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMV 123 (250)
T ss_dssp GHHHHHHHCCCTTEEEEESCCBSSCBSCTTCCBHHH---HHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHhcCCCceEeecccCCCCCCcccccCHHH---HHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEE
Confidence 777776541 13444444421 34444 456799999999983 2 4666777888899999999
Q ss_pred EEEcC-CHHHHH-------------HHhccCC-----CcEEeeccc-cC-cccccChhhHHHHhhhhccc---ccc---c
Q 015899 292 LVEVH-DEREMD-------------RVLGIEG-----IELIGINNR-NL-ETFEVDNSNTKKLLEGERGE---IIR---Q 344 (398)
Q Consensus 292 LVEVh-t~eEl~-------------rAl~l~G-----a~iIGINnR-dL-~tf~vDl~~t~~L~~~i~~~---~i~---~ 344 (398)
+++|- +++|-+ .++..-+ ..+|..-.. -. +.-.-+.+...+....+|.- .+- .
T Consensus 124 I~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a 203 (250)
T 2j27_A 124 IACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEAVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVA 203 (250)
T ss_dssp EEEECCCHHHHHTTCHHHHHHHHHHHHHHTCCGGGGGGEEEEEECGGGTTSSCCCCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred EEEeCCCHHHhhcccHHHHHHHHHHHHHhcCCHHHhCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhc
Confidence 99997 444421 1332101 113322110 00 00122444444444333321 010 1
Q ss_pred CCceEEEecCCCCHHHHHHHH-HcCCCEEEEcccccCCCChHHHHH
Q 015899 345 KNIIVVGESGLFTPDDIAYVQ-EAGVKAVLVGESIVKQDDPGKGIT 389 (398)
Q Consensus 345 ~~v~vVAESGI~t~eD~~~l~-~~GadaVLVGeaLmk~~dp~~~i~ 389 (398)
..+.++..|++ +++++..+. ..++||+|||.+-++ ++..+.++
T Consensus 204 ~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~ii~ 247 (250)
T 2j27_A 204 GELRILYGGSV-NGKNARTLYQQRDVNGFLVGGASLK-PEFVDIIK 247 (250)
T ss_dssp HHCCEEEESSC-CTTTHHHHHTSTTCCEEEESGGGGS-TTHHHHHH
T ss_pred ccccEEEcCCC-CHHHHHHHHcCCCCCeeeeehHHHH-HHHHHHHH
Confidence 24678888999 555787777 789999999999999 88877664
No 247
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=95.45 E-value=0.12 Score=46.11 Aligned_cols=114 Identities=16% Similarity=0.251 Sum_probs=70.5
Q ss_pred CcEEeccccCCHHH-HHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHc---CCcEEE-EcCCHHHHHHHhccCCCcEEe
Q 015899 240 CPLLCKEFIVDAWQ-IYYARTKGADAVLLIAAVLPDLDIRYMTKICKLL---GLTALV-EVHDEREMDRVLGIEGIELIG 314 (398)
Q Consensus 240 lPVL~KDFIid~~Q-I~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~L---GL~~LV-EVht~eEl~rAl~l~Ga~iIG 314 (398)
+|+++-.-.-+..+ +..+...|+|.|-+.... + ...+.++.+++. ++.+-+ .++|.++++.+.+. |+++|
T Consensus 13 i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~-~--~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~-Gad~i- 87 (205)
T 1wa3_A 13 VAVLRANSVEEAKEKALAVFEGGVHLIEITFTV-P--DADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVES-GAEFI- 87 (205)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTTCCEEEEETTS-T--THHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHH-TCSEE-
T ss_pred EEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCC-h--hHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHc-CCCEE-
Confidence 56665431112223 334457799999765443 2 223334444432 354444 56999999999997 99999
Q ss_pred eccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 015899 315 INNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVG 375 (398)
Q Consensus 315 INnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVG 375 (398)
+.. + |. ....+.+.. .+++++. |+.|++++.++.++|+|.|-+-
T Consensus 88 v~~-~---~~---~~~~~~~~~--------~g~~vi~--g~~t~~e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 88 VSP-H---LD---EEISQFCKE--------KGVFYMP--GVMTPTELVKAMKLGHTILKLF 131 (205)
T ss_dssp ECS-S---CC---HHHHHHHHH--------HTCEEEC--EECSHHHHHHHHHTTCCEEEET
T ss_pred EcC-C---CC---HHHHHHHHH--------cCCcEEC--CcCCHHHHHHHHHcCCCEEEEc
Confidence 652 1 21 122333332 3566665 7889999999999999988653
No 248
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=95.45 E-value=0.055 Score=51.82 Aligned_cols=138 Identities=18% Similarity=0.215 Sum_probs=83.9
Q ss_pred CCHHHHHHHHHcCcCEEEEeccC----C--ChHHHHHHHHHHHHcCCcEEEEcC-CHHH-------------HHHHhccC
Q 015899 249 VDAWQIYYARTKGADAVLLIAAV----L--PDLDIRYMTKICKLLGLTALVEVH-DERE-------------MDRVLGIE 308 (398)
Q Consensus 249 id~~QI~eAr~~GADaVLLiaai----L--~~~~L~~Li~~a~~LGL~~LVEVh-t~eE-------------l~rAl~l~ 308 (398)
|++.++ +.+||+.|+|+.+= + +++.+..=++.|.+.||.++++|. +++| ++.++..-
T Consensus 78 iS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~ 154 (255)
T 1tre_A 78 TSAAML---KDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQ 154 (255)
T ss_dssp CCHHHH---HHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHH---HHcCCCEEEECccccccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcC
Confidence 555565 45699999999983 2 455566667888899999999997 4544 22222110
Q ss_pred CCc-----EEeeccc-cC-cccccChhhHHHHhhhhcccc--cc---cCCceEEEecCCCCHHHHHHHHH-cCCCEEEEc
Q 015899 309 GIE-----LIGINNR-NL-ETFEVDNSNTKKLLEGERGEI--IR---QKNIIVVGESGLFTPDDIAYVQE-AGVKAVLVG 375 (398)
Q Consensus 309 Ga~-----iIGINnR-dL-~tf~vDl~~t~~L~~~i~~~~--i~---~~~v~vVAESGI~t~eD~~~l~~-~GadaVLVG 375 (398)
+++ +|..-.. -. +.-.-+.+...+....+|.-. +- ...+.++..|++ +++++..+.. .++||+|||
T Consensus 155 ~~~~~~~vvIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVG 233 (255)
T 1tre_A 155 GAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSV-NASNAAELFAQPDIDGALVG 233 (255)
T ss_dssp CGGGGTTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECSCC-CTTTHHHHHTSTTCCEEEES
T ss_pred CHHHcCcEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCC-CHHHHHHHHcCCCCCeeEec
Confidence 112 3322110 00 001223444444443333210 00 124678888888 5558888876 899999999
Q ss_pred ccccCCCChHHHHHh
Q 015899 376 ESIVKQDDPGKGITG 390 (398)
Q Consensus 376 eaLmk~~dp~~~i~~ 390 (398)
.+-+++++..+.++.
T Consensus 234 gAsL~a~~F~~Ii~~ 248 (255)
T 1tre_A 234 GASLKADAFAVIVKA 248 (255)
T ss_dssp GGGGCHHHHHHHHHH
T ss_pred HHHhChHHHHHHHHH
Confidence 999999887776653
No 249
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=95.42 E-value=0.12 Score=51.47 Aligned_cols=122 Identities=18% Similarity=0.087 Sum_probs=80.2
Q ss_pred HHHHHcCcCEEEEeccC-------C-------Ch----------HHHHHHHHHHHH-cCC-cEEEEcCC-----------
Q 015899 255 YYARTKGADAVLLIAAV-------L-------PD----------LDIRYMTKICKL-LGL-TALVEVHD----------- 297 (398)
Q Consensus 255 ~eAr~~GADaVLLiaai-------L-------~~----------~~L~~Li~~a~~-LGL-~~LVEVht----------- 297 (398)
..|..+|.|+|=|.++- | +| .-+.+.++..++ .|- .+.|-++-
T Consensus 168 ~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~ 247 (361)
T 3gka_A 168 ENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSD 247 (361)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSC
T ss_pred HHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCC
Confidence 35667899999998773 1 11 124455555553 343 45554442
Q ss_pred -HHH---HHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcC-CCEE
Q 015899 298 -ERE---MDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAG-VKAV 372 (398)
Q Consensus 298 -~eE---l~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~G-adaV 372 (398)
.++ +-+.++-.|+++|-+.++.. .. +...++.+. .++++|+-||| |++++.++.+.| ||.|
T Consensus 248 ~~~~~~~la~~l~~~Gvd~i~v~~~~~---~~--~~~~~ik~~--------~~iPvi~~Ggi-t~e~a~~~l~~G~aD~V 313 (361)
T 3gka_A 248 PAATFGHVARELGRRRIAFLFARESFG---GD--AIGQQLKAA--------FGGPFIVNENF-TLDSAQAALDAGQADAV 313 (361)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCS---TT--CCHHHHHHH--------HCSCEEEESSC-CHHHHHHHHHTTSCSEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEECCCCC---CH--HHHHHHHHH--------cCCCEEEeCCC-CHHHHHHHHHcCCccEE
Confidence 222 33333324889988876651 11 234444443 24689999999 999999999998 9999
Q ss_pred EEcccccCCCChHHHHHh
Q 015899 373 LVGESIVKQDDPGKGITG 390 (398)
Q Consensus 373 LVGeaLmk~~dp~~~i~~ 390 (398)
.+|.+++..+|....+++
T Consensus 314 ~iGR~~ladPdl~~k~~~ 331 (361)
T 3gka_A 314 AWGKLFIANPDLPRRFKL 331 (361)
T ss_dssp EESHHHHHCTTHHHHHHH
T ss_pred EECHHhHhCcHHHHHHHh
Confidence 999999999998877765
No 250
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.37 E-value=0.21 Score=47.08 Aligned_cols=155 Identities=12% Similarity=0.179 Sum_probs=88.1
Q ss_pred EEEEeccCCcCCCCHHHH-HHHHhcCCCCcEEeccccCCHHHHHHH-HHcCcCEEEEeccCCChHHHHHHHHHHHHcCCc
Q 015899 213 CLSILTDEKYFKGSFENL-EAVRSAGVKCPLLCKEFIVDAWQIYYA-RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLT 290 (398)
Q Consensus 213 aISVLTd~~~F~Gs~edL-~~Ir~a~v~lPVL~KDFIid~~QI~eA-r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~ 290 (398)
++-.-|+.-||+--...+ ..+++. -=+||++-+=.-+..++.+| ...|++.|=+- .-++..++.+-+..+.++ +
T Consensus 10 ~~~~~~~~~~~~~~m~~~~~~l~~~-~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt--~~t~~a~e~I~~l~~~~~-~ 85 (232)
T 4e38_A 10 GVDLGTENLYFQSMMSTINNQLKAL-KVIPVIAIDNAEDIIPLGKVLAENGLPAAEIT--FRSDAAVEAIRLLRQAQP-E 85 (232)
T ss_dssp ----------CCCCHHHHHHHHHHH-CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEE--TTSTTHHHHHHHHHHHCT-T
T ss_pred ccccCchhhHHHHHHHHHHHHHHhC-CEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEe--CCCCCHHHHHHHHHHhCC-C
Confidence 344567888888765433 444554 34899987754455566655 57799987763 334433433333334442 2
Q ss_pred EEEE---cCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHc
Q 015899 291 ALVE---VHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA 367 (398)
Q Consensus 291 ~LVE---Vht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~ 367 (398)
.++- |-|.++++.|+++ ||++|-.-+ .|.+.... +.. .+++++. |+.|++++.++.++
T Consensus 86 ~~iGaGTVlt~~~a~~Ai~A-GA~fIvsP~-------~~~~vi~~-~~~--------~gi~~ip--Gv~TptEi~~A~~~ 146 (232)
T 4e38_A 86 MLIGAGTILNGEQALAAKEA-GATFVVSPG-------FNPNTVRA-CQE--------IGIDIVP--GVNNPSTVEAALEM 146 (232)
T ss_dssp CEEEEECCCSHHHHHHHHHH-TCSEEECSS-------CCHHHHHH-HHH--------HTCEEEC--EECSHHHHHHHHHT
T ss_pred CEEeECCcCCHHHHHHHHHc-CCCEEEeCC-------CCHHHHHH-HHH--------cCCCEEc--CCCCHHHHHHHHHc
Confidence 2333 5689999999997 999986543 23333222 221 2555555 78999999999999
Q ss_pred CCCEEEEcccccCCCC-hHHHHHhhhc
Q 015899 368 GVKAVLVGESIVKQDD-PGKGITGLFG 393 (398)
Q Consensus 368 GadaVLVGeaLmk~~d-p~~~i~~L~~ 393 (398)
|+|.|=+ +-.... -...++.|.+
T Consensus 147 Gad~vK~---FPa~~~gG~~~lkal~~ 170 (232)
T 4e38_A 147 GLTTLKF---FPAEASGGISMVKSLVG 170 (232)
T ss_dssp TCCEEEE---CSTTTTTHHHHHHHHHT
T ss_pred CCCEEEE---CcCccccCHHHHHHHHH
Confidence 9998844 222222 1366666654
No 251
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=95.27 E-value=0.0061 Score=58.45 Aligned_cols=158 Identities=15% Similarity=0.136 Sum_probs=93.7
Q ss_pred HHHHHHhc--CCCCcEEeccc----------cCCHHHHHHHHHcCcCEEEEecc----CC--ChHHHHHHHHHHHHcCCc
Q 015899 229 NLEAVRSA--GVKCPLLCKEF----------IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLT 290 (398)
Q Consensus 229 dL~~Ir~a--~v~lPVL~KDF----------Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~ 290 (398)
+|..+++. +.++.|=..|. =+.+.+ .+.+||+.|+|+.+ .+ +++.+..=++.|.+.||.
T Consensus 47 ~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~m---L~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~ 123 (255)
T 1b9b_A 47 ALSEVGEILSGRNIKLGAQNVFYEDQGAFTGEISPLM---LQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGMT 123 (255)
T ss_dssp GHHHHHHHHTTSSSEEEESCCCSSSSBSCTTCCCHHH---HHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhcCCCceEeeccCCCCCCCCccCcCCHHH---HHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCE
Confidence 66666543 12455555442 145555 45679999999998 23 345566667888999999
Q ss_pred EEEEcC-CHHH-------------HHHHhccCC-----CcEEeeccc-cC-cccccChhhHHHHhhhhccc---ccc---
Q 015899 291 ALVEVH-DERE-------------MDRVLGIEG-----IELIGINNR-NL-ETFEVDNSNTKKLLEGERGE---IIR--- 343 (398)
Q Consensus 291 ~LVEVh-t~eE-------------l~rAl~l~G-----a~iIGINnR-dL-~tf~vDl~~t~~L~~~i~~~---~i~--- 343 (398)
++++|. +++| ++.++..-+ ..+|..-.. -. +.-.-+.+...+....+|.- .+-
T Consensus 124 pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~ 203 (255)
T 1b9b_A 124 PILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEAKRVVIAYEPVWAIGTGRVATPQQAQEVHAFIRKLLSEMYDEET 203 (255)
T ss_dssp EEEEECCCHHHHHHTCHHHHHHHHHHHHHTTCCHHHHTTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred EEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHcCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccc
Confidence 999996 5554 223332100 123322110 00 00112344444433333221 010
Q ss_pred cCCceEEEecCCCCHHHHHHHH-HcCCCEEEEcccccCCC--ChHHHHHh
Q 015899 344 QKNIIVVGESGLFTPDDIAYVQ-EAGVKAVLVGESIVKQD--DPGKGITG 390 (398)
Q Consensus 344 ~~~v~vVAESGI~t~eD~~~l~-~~GadaVLVGeaLmk~~--dp~~~i~~ 390 (398)
...+.++..|++ +++++..+. ..++||+|||.+-++++ +..+.++.
T Consensus 204 a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGgASLka~~~~F~~ii~~ 252 (255)
T 1b9b_A 204 AGSIRILYGGSI-KPDNFLGLIVQKDIDGGLVGGASLKESFIELARIMRG 252 (255)
T ss_dssp HHHSEEEEESSC-CHHHHTTTSSSTTCCEEEESGGGTSTHHHHHHHHHTC
T ss_pred cCcceEEEcCcC-CHHHHHHHHcCCCCCeeEeehHhhcCccccHHHHHHH
Confidence 124678888888 668898887 77999999999999998 77766643
No 252
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=95.25 E-value=0.016 Score=56.55 Aligned_cols=88 Identities=10% Similarity=0.049 Sum_probs=59.3
Q ss_pred CCHHHHHHHHhcCCCCcEE--eccccCCHHHHHHHHHcCcCEEEEeccCCC---hH-HHHHHHHHHHHcCCcEEEEcCCH
Q 015899 225 GSFENLEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLP---DL-DIRYMTKICKLLGLTALVEVHDE 298 (398)
Q Consensus 225 Gs~edL~~Ir~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL~---~~-~L~~Li~~a~~LGL~~LVEVht~ 298 (398)
-+++.+..+++. +++||+ .-..|-++.++.+++.+|||+|+++.+++. +. .+++|.+..+. ..+.
T Consensus 194 ~~~~ll~~i~~~-~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~~--------~~~~ 264 (297)
T 4adt_A 194 APIDLILLTRKL-KRLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAVSN--------FNNP 264 (297)
T ss_dssp CCHHHHHHHHHH-TSCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHT--------TTCH
T ss_pred CCHHHHHHHHHh-cCCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHHh--------hCCH
Confidence 356778888886 789987 666666999999999999999999988873 22 35556554432 3445
Q ss_pred HHHHHHhccCCCcEEeeccccCc
Q 015899 299 REMDRVLGIEGIELIGINNRNLE 321 (398)
Q Consensus 299 eEl~rAl~l~Ga~iIGINnRdL~ 321 (398)
+++..+-.--|-.+.|++...+.
T Consensus 265 ~~~~~i~~~~~~~~~~~~~~~~~ 287 (297)
T 4adt_A 265 KILLNVSLGLGKAMHGNTKVSNK 287 (297)
T ss_dssp HHHHHTTTTCCCCCCCCCC----
T ss_pred HHHHHHHhhcccCCCCCCccccc
Confidence 55544433226678888876654
No 253
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=95.24 E-value=0.57 Score=45.43 Aligned_cols=133 Identities=17% Similarity=0.258 Sum_probs=97.6
Q ss_pred CCCcE-EeccccCCHHHHHHHHHcCcCEEEEeccCCChHH----HHHHHHHHHHcCCcEEEEc-----------------
Q 015899 238 VKCPL-LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD----IRYMTKICKLLGLTALVEV----------------- 295 (398)
Q Consensus 238 v~lPV-L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~----L~~Li~~a~~LGL~~LVEV----------------- 295 (398)
.++|| |.-|-.-+...+.+|..+|-+.|.++.+-++-++ .++++++|+..|+.+=.|+
T Consensus 73 ~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~ 152 (286)
T 1gvf_A 73 YNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESA 152 (286)
T ss_dssp TTSCBEEEEEEECCHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CC
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHcCCCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccc
Confidence 57897 5667667778899999999999999999998543 7889999998887762221
Q ss_pred --CCHHHHHHHhccCCCcEEeeccccC-----cccccChhhHHHHhhhhcccccccCCceEE--EecCCCCHHHHHHHHH
Q 015899 296 --HDEREMDRVLGIEGIELIGINNRNL-----ETFEVDNSNTKKLLEGERGEIIRQKNIIVV--GESGLFTPDDIAYVQE 366 (398)
Q Consensus 296 --ht~eEl~rAl~l~Ga~iIGINnRdL-----~tf~vDl~~t~~L~~~i~~~~i~~~~v~vV--AESGI~t~eD~~~l~~ 366 (398)
.+++|+.+..+..|++.+.+.-=+. .+-+.|++...++.+.+ ++++| ..||+ ..++++++.+
T Consensus 153 ~~T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~--------~vpLVlHGgSG~-~~e~i~~ai~ 223 (286)
T 1gvf_A 153 FLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVV--------DVPLVLHGASDV-PDEFVRRTIE 223 (286)
T ss_dssp SSCCHHHHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHC--------CSCEEECCCTTC-CHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHhc--------CCCEEEECCCCC-CHHHHHHHHH
Confidence 4577777766434889887752222 13456787777776642 34444 46677 7778999999
Q ss_pred cCCCEEEEccccc
Q 015899 367 AGVKAVLVGESIV 379 (398)
Q Consensus 367 ~GadaVLVGeaLm 379 (398)
+|+.-|=|++.+.
T Consensus 224 ~Gv~KiNi~Tdl~ 236 (286)
T 1gvf_A 224 LGVTKVNVATELK 236 (286)
T ss_dssp TTEEEEEECHHHH
T ss_pred CCCeEEEEChHHH
Confidence 9999999998763
No 254
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=95.21 E-value=0.027 Score=54.08 Aligned_cols=74 Identities=14% Similarity=0.070 Sum_probs=59.1
Q ss_pred CHHHHHHHHHHcC-CcEEEEec--------cC----------CcC---CC------CHHHHHHHHhcCC-CCcEEecccc
Q 015899 198 DPVEIARSYEKGG-AACLSILT--------DE----------KYF---KG------SFENLEAVRSAGV-KCPLLCKEFI 248 (398)
Q Consensus 198 dp~~iA~aY~~~G-A~aISVLT--------d~----------~~F---~G------s~edL~~Ir~a~v-~lPVL~KDFI 248 (398)
+..++|+.++++| +++|.|-. |. ..+ .| +++.+..+++. + ++||+.-..|
T Consensus 175 ~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~-~~~ipvi~~GGI 253 (314)
T 2e6f_A 175 HFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRR-CPDKLVFGCGGV 253 (314)
T ss_dssp HHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHH-CTTSEEEEESSC
T ss_pred HHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHh-cCCCCEEEECCC
Confidence 4556699999999 99998642 10 012 22 26788888887 7 9999999999
Q ss_pred CCHHHHHHHHHcCcCEEEEeccCC
Q 015899 249 VDAWQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 249 id~~QI~eAr~~GADaVLLiaaiL 272 (398)
.++.++.++..+|||+|.+...++
T Consensus 254 ~~~~da~~~l~~GAd~V~ig~~~l 277 (314)
T 2e6f_A 254 YSGEDAFLHILAGASMVQVGTALQ 277 (314)
T ss_dssp CSHHHHHHHHHHTCSSEEECHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEchhhH
Confidence 999999999999999999988877
No 255
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=95.13 E-value=0.027 Score=57.75 Aligned_cols=74 Identities=15% Similarity=0.122 Sum_probs=60.0
Q ss_pred CHHHHHHHHHHcCCcEEEEeccC-------------CcCCC------CHHHHHHHHhcCC--CCcEEeccccCCHHHHHH
Q 015899 198 DPVEIARSYEKGGAACLSILTDE-------------KYFKG------SFENLEAVRSAGV--KCPLLCKEFIVDAWQIYY 256 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~-------------~~F~G------s~edL~~Ir~a~v--~lPVL~KDFIid~~QI~e 256 (398)
+..++|+..+++||++|.|-.=- +.+.| +.+.+..++++ + ++||+.-..|.++.++++
T Consensus 312 d~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~-v~~~iPVIg~GGI~s~~DA~e 390 (443)
T 1tv5_A 312 QKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNY-TNKQIPIIASGGIFSGLDALE 390 (443)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHH-TTTCSCEEEESSCCSHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHH-cCCCCcEEEECCCCCHHHHHH
Confidence 57789999999999999885310 11112 35778888887 7 899999999999999999
Q ss_pred HHHcCcCEEEEeccCC
Q 015899 257 ARTKGADAVLLIAAVL 272 (398)
Q Consensus 257 Ar~~GADaVLLiaaiL 272 (398)
+..+|||+|-+...++
T Consensus 391 ~l~aGAd~Vqigrall 406 (443)
T 1tv5_A 391 KIEAGASVCQLYSCLV 406 (443)
T ss_dssp HHHTTEEEEEESHHHH
T ss_pred HHHcCCCEEEEcHHHH
Confidence 9999999999988765
No 256
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=95.00 E-value=0.036 Score=52.46 Aligned_cols=84 Identities=19% Similarity=0.170 Sum_probs=60.4
Q ss_pred CCHHHHHHHHHHcCC-cEEE--EeccCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEeccCC
Q 015899 197 FDPVEIARSYEKGGA-ACLS--ILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA-~aIS--VLTd~~~F~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (398)
.+|. .++.|.+.|. ..+. -+.- .--.+..+.++.+|+. + ++||.....|.++.|+.++.. |||+|++..++.
T Consensus 139 ~~~~-~~~~~a~~g~~~~~~~VYl~s-~G~~~~~~~i~~i~~~-~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v 214 (240)
T 1viz_A 139 LNMD-DIVAYARVSELLQLPIFYLEY-SGVLGDIEAVKKTKAV-LETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVY 214 (240)
T ss_dssp CCHH-HHHHHHHHHHHTTCSEEEEEC-TTSCCCHHHHHHHHHT-CSSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHH
T ss_pred CCHH-HHHHHHHhCcccCCCEEEEeC-CCccChHHHHHHHHHh-cCCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHH
Confidence 3566 7777777663 2222 2222 2235688999999987 8 999999999999999999988 999999999887
Q ss_pred ChHH--HHHHHHHHH
Q 015899 273 PDLD--IRYMTKICK 285 (398)
Q Consensus 273 ~~~~--L~~Li~~a~ 285 (398)
.+.+ +++ ++..+
T Consensus 215 ~~~~~~~~~-v~~~~ 228 (240)
T 1viz_A 215 EDFDRALKT-VAAVK 228 (240)
T ss_dssp HCHHHHHTH-HHHHH
T ss_pred hCHHHHHHH-HHHHH
Confidence 5433 444 44333
No 257
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=94.95 E-value=0.021 Score=56.65 Aligned_cols=77 Identities=17% Similarity=0.167 Sum_probs=61.1
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEe-------------ccC------CcCCC---------CHHHHHHHHhcCC--CCcE
Q 015899 193 LREDFDPVEIARSYEKGGAACLSIL-------------TDE------KYFKG---------SFENLEAVRSAGV--KCPL 242 (398)
Q Consensus 193 i~~~~dp~~iA~aY~~~GA~aISVL-------------Td~------~~F~G---------s~edL~~Ir~a~v--~lPV 242 (398)
|+++++..++|+..+.+||++|+.+ +.. .-++| +++.+..+++. + ++||
T Consensus 200 i~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~-~~~~ipI 278 (345)
T 3oix_A 200 LPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKR-LNPSIQI 278 (345)
T ss_dssp ECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTT-SCTTSEE
T ss_pred ECCCCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHH-cCCCCcE
Confidence 3456799999999999999887642 111 11233 25788888886 7 7999
Q ss_pred EeccccCCHHHHHHHHHcCcCEEEEecc
Q 015899 243 LCKEFIVDAWQIYYARTKGADAVLLIAA 270 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~GADaVLLiaa 270 (398)
+.-..|.++.++.++..+|||+|.+..+
T Consensus 279 Ig~GGI~s~~da~~~l~aGAd~V~igra 306 (345)
T 3oix_A 279 IGTGGVXTGRDAFEHILCGASMVQIGTA 306 (345)
T ss_dssp EEESSCCSHHHHHHHHHHTCSEEEESHH
T ss_pred EEECCCCChHHHHHHHHhCCCEEEEChH
Confidence 9999999999999999999999999887
No 258
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=94.95 E-value=0.032 Score=55.63 Aligned_cols=79 Identities=14% Similarity=0.122 Sum_probs=58.8
Q ss_pred CCCCCHHHH---HHHHHHcC-CcEEEE---------ec---c------CCcCCC---------CHHHHHHHHhcCC-CCc
Q 015899 194 REDFDPVEI---ARSYEKGG-AACLSI---------LT---D------EKYFKG---------SFENLEAVRSAGV-KCP 241 (398)
Q Consensus 194 ~~~~dp~~i---A~aY~~~G-A~aISV---------LT---d------~~~F~G---------s~edL~~Ir~a~v-~lP 241 (398)
++++|..++ |+.+.++| |++|.+ ++ . ...++| +++.+..+++. + ++|
T Consensus 201 ~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~-~~~ip 279 (354)
T 4ef8_A 201 PPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRR-CPGKL 279 (354)
T ss_dssp CCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHH-CTTSE
T ss_pred cCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHh-CCCCC
Confidence 344565555 55555887 999986 21 1 123444 46778888876 5 799
Q ss_pred EEeccccCCHHHHHHHHHcCcCEEEEeccCCC
Q 015899 242 LLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 242 VL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (398)
|+.-..|.+..++.++..+|||+|.+...++.
T Consensus 280 II~~GGI~s~~da~~~l~aGAd~V~vgra~l~ 311 (354)
T 4ef8_A 280 IFGCGGVYTGEDAFLHVLAGASMVQVGTALQE 311 (354)
T ss_dssp EEEESCCCSHHHHHHHHHHTEEEEEECHHHHH
T ss_pred EEEECCcCCHHHHHHHHHcCCCEEEEhHHHHH
Confidence 99999999999999999999999999887764
No 259
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=94.92 E-value=0.71 Score=45.28 Aligned_cols=133 Identities=14% Similarity=0.118 Sum_probs=97.0
Q ss_pred CCCcE-EeccccCCHHHHHHHHHcCcCEEEEeccCCChHH----HHHHHHHHHHcCCcEEEEc-----------------
Q 015899 238 VKCPL-LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD----IRYMTKICKLLGLTALVEV----------------- 295 (398)
Q Consensus 238 v~lPV-L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~----L~~Li~~a~~LGL~~LVEV----------------- 295 (398)
.++|| |.-|-.-+...+.+|..+|-+.|.++.+-++-++ .++++++|+..|+.+=.|+
T Consensus 73 ~~VPValHLDHg~~~e~~~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~ 152 (307)
T 3n9r_A 73 PHIPVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDA 152 (307)
T ss_dssp TTSCEEEEEEEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------C
T ss_pred CCCcEEEECCCCCCHHHHHHHHHhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccc
Confidence 57897 5566666778899999999999999999998543 7889999998887773331
Q ss_pred --CCHHHHHHHhccCCCcEEeeccc----cCc---ccccChhhHHHHhhhhcccccccCCceEEEe--c-----------
Q 015899 296 --HDEREMDRVLGIEGIELIGINNR----NLE---TFEVDNSNTKKLLEGERGEIIRQKNIIVVGE--S----------- 353 (398)
Q Consensus 296 --ht~eEl~rAl~l~Ga~iIGINnR----dL~---tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAE--S----------- 353 (398)
.|++|+.+..+..|++.+.+.-= .++ +-..|++...++.+. .++++|.= |
T Consensus 153 ~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~--------~~~PLVlHGgS~vp~~~~~~~~ 224 (307)
T 3n9r_A 153 VLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRL--------TNIPLVLHGASAIPDNVRKSYL 224 (307)
T ss_dssp CSCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHH--------HCSCEEESSCCCCCHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhc--------CCCCeEEeCCCCcchHHHHHHH
Confidence 47888877665348998866422 222 235688887777332 13455544 4
Q ss_pred ----------CCCCHHHHHHHHHcCCCEEEEccccc
Q 015899 354 ----------GLFTPDDIAYVQEAGVKAVLVGESIV 379 (398)
Q Consensus 354 ----------GI~t~eD~~~l~~~GadaVLVGeaLm 379 (398)
|+ ..++++++.++|+.-|=|++.+-
T Consensus 225 ~~gg~~~~~~G~-p~e~i~~ai~~GV~KiNi~Tdl~ 259 (307)
T 3n9r_A 225 DAGGDLKGSKGV-PFEFLQESVKGGINKVNTDTDLR 259 (307)
T ss_dssp HTTCCCTTCBCC-CHHHHHHHHHTTEEEEEECHHHH
T ss_pred HhcCccCCCCCC-CHHHHHHHHHcCceEEEechHHH
Confidence 77 68899999999999999988763
No 260
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=94.92 E-value=0.042 Score=53.21 Aligned_cols=80 Identities=20% Similarity=0.177 Sum_probs=60.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEec--cCCcCCC--CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHH-cCcCEEEEeccC
Q 015899 197 FDPVEIARSYEKGGAACLSILT--DEKYFKG--SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYART-KGADAVLLIAAV 271 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLT--d~~~F~G--s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~-~GADaVLLiaai 271 (398)
.+..++|+.+++.|+++|.|-. ....+.| .++.+..+++ ++||+.-..|.++.++.++.+ .|||+|.+.-.+
T Consensus 140 ~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~---~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~ 216 (318)
T 1vhn_A 140 NEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK---RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGA 216 (318)
T ss_dssp CCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC---SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc---CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHH
Confidence 3566999999999999999852 1222333 3444445543 799999999999999999988 799999999888
Q ss_pred CChHHHHH
Q 015899 272 LPDLDIRY 279 (398)
Q Consensus 272 L~~~~L~~ 279 (398)
+.+.++-.
T Consensus 217 l~~P~l~~ 224 (318)
T 1vhn_A 217 IGRPWIFK 224 (318)
T ss_dssp TTCTTHHH
T ss_pred HhCcchHH
Confidence 87655433
No 261
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=94.90 E-value=0.046 Score=52.64 Aligned_cols=114 Identities=18% Similarity=0.196 Sum_probs=69.1
Q ss_pred CCHHHHHHHHHHcCCcEEEEe-------------------------c---cCCc------CCCCHHHHHHHHhcCCCCcE
Q 015899 197 FDPVEIARSYEKGGAACLSIL-------------------------T---DEKY------FKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVL-------------------------T---d~~~------F~Gs~edL~~Ir~a~v~lPV 242 (398)
.++.+..++. +.||+.|.+- | -+.. ...+++.+..+++. +++||
T Consensus 133 ~~~~e~~~a~-~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~-~~iPv 210 (305)
T 2nv1_A 133 RDLGEATRRI-AEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKD-GKLPV 210 (305)
T ss_dssp SSHHHHHHHH-HTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHH-TSCSS
T ss_pred CCHHHHHHHH-HCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHh-cCCCE
Confidence 3566777765 7899999882 1 1111 24567888899886 79999
Q ss_pred E--eccccCCHHHHHHHHHcCcCEEEEeccCCC---h-HHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeec
Q 015899 243 L--CKEFIVDAWQIYYARTKGADAVLLIAAVLP---D-LDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGIN 316 (398)
Q Consensus 243 L--~KDFIid~~QI~eAr~~GADaVLLiaaiL~---~-~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGIN 316 (398)
+ .-..|-++.++.++..+|||+|+++.+++. + ..++++.+..+. ..+.+.+....+.-|..+-|++
T Consensus 211 i~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~ 282 (305)
T 2nv1_A 211 VNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTH--------FTDYKLIAELSKELGTAMKGIE 282 (305)
T ss_dssp CEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHT--------TTCHHHHHHHTSCC--------
T ss_pred EEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHHHH--------hcChhhHHHHHHHhhhhhcCCC
Confidence 8 777777999999999999999999999883 2 235555544332 2345555443333355566666
Q ss_pred cccC
Q 015899 317 NRNL 320 (398)
Q Consensus 317 nRdL 320 (398)
...+
T Consensus 283 ~~~~ 286 (305)
T 2nv1_A 283 ISNL 286 (305)
T ss_dssp ----
T ss_pred hhhc
Confidence 5554
No 262
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=94.86 E-value=0.062 Score=50.27 Aligned_cols=99 Identities=23% Similarity=0.276 Sum_probs=68.5
Q ss_pred ceEEEEeccCCCCCCC-CCCCCCH---HHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCC--
Q 015899 177 PALIAEVKKASPSRGI-LREDFDP---VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVD-- 250 (398)
Q Consensus 177 ~~vIAEvKraSPSkG~-i~~~~dp---~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid-- 250 (398)
..+|.|+- |. |+ +....++ .+.++.+++.||+.|-+- +.++++.++.+++. +++||+.-..|-.
T Consensus 146 ~~viv~~~---~~-G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~-----~~~~~~~l~~i~~~-~~ipvva~GGi~~~~ 215 (273)
T 2qjg_A 146 MPLIAMMY---PR-GKHIQNERDPELVAHAARLGAELGADIVKTS-----YTGDIDSFRDVVKG-CPAPVVVAGGPKTNT 215 (273)
T ss_dssp CCEEEEEE---EC-STTCSCTTCHHHHHHHHHHHHHTTCSEEEEC-----CCSSHHHHHHHHHH-CSSCEEEECCSCCSS
T ss_pred CCEEEEeC---CC-CcccCCCCCHhHHHHHHHHHHHcCCCEEEEC-----CCCCHHHHHHHHHh-CCCCEEEEeCCCCCC
Confidence 45777763 32 43 2222334 555688999999988873 35789999999986 7999998777663
Q ss_pred HHH----HHHHHHcCcCEEEEeccCCChHH----HHHHHHHHH
Q 015899 251 AWQ----IYYARTKGADAVLLIAAVLPDLD----IRYMTKICK 285 (398)
Q Consensus 251 ~~Q----I~eAr~~GADaVLLiaaiL~~~~----L~~Li~~a~ 285 (398)
+.+ +.++..+|||+|..+..++...+ +++|.+..+
T Consensus 216 ~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~~~~~~~~~l~~~~~ 258 (273)
T 2qjg_A 216 DEEFLQMIKDAMEAGAAGVAVGRNIFQHDDVVGITRAVCKIVH 258 (273)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEeeHHhhCCCCHHHHHHHHHHHHh
Confidence 444 77778899999999888764323 444444433
No 263
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=94.84 E-value=0.093 Score=60.88 Aligned_cols=106 Identities=14% Similarity=0.054 Sum_probs=70.8
Q ss_pred CChHHHHHHHHHHHHc--CCcEEEEcC----CHHHHHHHhccCCCcEEeeccccCccc-c-------cChhhHHHHhhhh
Q 015899 272 LPDLDIRYMTKICKLL--GLTALVEVH----DEREMDRVLGIEGIELIGINNRNLETF-E-------VDNSNTKKLLEGE 337 (398)
Q Consensus 272 L~~~~L~~Li~~a~~L--GL~~LVEVh----t~eEl~rAl~l~Ga~iIGINnRdL~tf-~-------vDl~~t~~L~~~i 337 (398)
.+.+++.++++..++. +..+.|-+- ..+++..+.++ |++.|-|.+.+--|- . .-+. +..++..+
T Consensus 975 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~A-GAD~IvVsG~eGGTgasp~~~~~~~G~P-t~~aL~ev 1052 (1479)
T 1ea0_A 975 YSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKA-NADIILISGNSGGTGASPQTSIKFAGLP-WEMGLSEV 1052 (1479)
T ss_dssp SSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHT-TCSEEEEECTTCCCSSEETTHHHHSCCC-HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHc-CCcEEEEcCCCCCCCCCchhhhcCCchh-HHHHHHHH
Confidence 4456788888877765 666655442 46777888887 999998866542221 0 0011 12222221
Q ss_pred cc----cccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015899 338 RG----EIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 338 ~~----~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 380 (398)
.. ..+ ...+++|+.|||.|..|+.++..+||++|-+|+++|.
T Consensus 1053 ~~al~~~gl-r~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~ 1098 (1479)
T 1ea0_A 1053 HQVLTLNRL-RHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLI 1098 (1479)
T ss_dssp HHHHHTTTC-TTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHH
T ss_pred HHHHHHcCC-CCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHH
Confidence 11 011 1368999999999999999999999999999999865
No 264
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=94.82 E-value=0.3 Score=43.83 Aligned_cols=101 Identities=21% Similarity=0.177 Sum_probs=66.9
Q ss_pred HHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEE---cCCHHHHHHHhccCCCcEEeeccccCcccccChhh
Q 015899 253 QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE---VHDEREMDRVLGIEGIELIGINNRNLETFEVDNSN 329 (398)
Q Consensus 253 QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVE---Vht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~ 329 (398)
++..+...|+|.|-|... +...++.+.+.++..+...++- +.+.+.++.++++ |++.|-+.+. +.+.
T Consensus 24 ~~~~~~~~G~~~i~l~~~--~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~-Gad~V~~~~~-------~~~~ 93 (212)
T 2v82_A 24 HVGAVIDAGFDAVEIPLN--SPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARM-GCQLIVTPNI-------HSEV 93 (212)
T ss_dssp HHHHHHHHTCCEEEEETT--STTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHT-TCCEEECSSC-------CHHH
T ss_pred HHHHHHHCCCCEEEEeCC--ChhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHc-CCCEEEeCCC-------CHHH
Confidence 345556789999988543 3334555555666677777662 4577899999997 9998854432 2222
Q ss_pred HHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEE
Q 015899 330 TKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLV 374 (398)
Q Consensus 330 t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLV 374 (398)
.+.++. .+..++.+ ++|++++....++|+|.|++
T Consensus 94 -~~~~~~--------~g~~~~~g--~~t~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 94 -IRRAVG--------YGMTVCPG--CATATEAFTALEAGAQALKI 127 (212)
T ss_dssp -HHHHHH--------TTCEEECE--ECSHHHHHHHHHTTCSEEEE
T ss_pred -HHHHHH--------cCCCEEee--cCCHHHHHHHHHCCCCEEEE
Confidence 222222 12333332 89999999999999999987
No 265
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=94.82 E-value=0.082 Score=51.29 Aligned_cols=169 Identities=16% Similarity=0.119 Sum_probs=88.9
Q ss_pred CHHHHHHHHHHc--CCcEEEEeccCCcCCCCHHHHHHHHhc----CC--CCcEEe-cccc----CCH---HHHHHHHHcC
Q 015899 198 DPVEIARSYEKG--GAACLSILTDEKYFKGSFENLEAVRSA----GV--KCPLLC-KEFI----VDA---WQIYYARTKG 261 (398)
Q Consensus 198 dp~~iA~aY~~~--GA~aISVLTd~~~F~Gs~edL~~Ir~a----~v--~lPVL~-KDFI----id~---~QI~eAr~~G 261 (398)
++.++++...+. |.+++-| .+..+..+++. +. .+.|-. =+|= ... +++.+|...|
T Consensus 49 dI~~lc~eA~~~~~~~aaVCV---------~p~~V~~a~~~L~~~gs~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~G 119 (281)
T 2a4a_A 49 DIRELCNESVKTCPFAAAVCV---------YPKFVKFINEKIKQEINPFKPKIACVINFPYGTDSMEKVLNDTEKALDDG 119 (281)
T ss_dssp HHHHHHHHHHSSSSCCSEEEE---------CGGGHHHHHHHHHHHSSSCCSEEEEEESTTTCCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCccEEEE---------CHHHHHHHHHHhhccCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcC
Confidence 445555556666 8888877 33344444321 23 344421 1331 111 5788899999
Q ss_pred cCEEEEeccC---CC-h-H---HHHHHHHHHHH-c-C--CcEEEEcCCH--HH-H----HHHhccCCCcEEeeccccCcc
Q 015899 262 ADAVLLIAAV---LP-D-L---DIRYMTKICKL-L-G--LTALVEVHDE--RE-M----DRVLGIEGIELIGINNRNLET 322 (398)
Q Consensus 262 ADaVLLiaai---L~-~-~---~L~~Li~~a~~-L-G--L~~LVEVht~--eE-l----~rAl~l~Ga~iIGINnRdL~t 322 (398)
||.|-+..-+ ++ + + .+.+-+...++ . + +.+++|..-+ +| + +.+.++ ||++|=+.. .+.+
T Consensus 120 AdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L~d~e~i~~A~~ia~ea-GADfVKTST-Gf~~ 197 (281)
T 2a4a_A 120 ADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGELKTEDLIIKTTLAVLNG-NADFIKTST-GKVQ 197 (281)
T ss_dssp CSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHHCSHHHHHHHHHHHHTT-TCSEEECCC-SCSS
T ss_pred CCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHHHHHHHh-CCCEEEeCC-CCCC
Confidence 9998664432 22 1 2 22222222222 2 3 3347887522 33 3 334565 999986652 1111
Q ss_pred ccc---ChhhHHHHhhhhc-ccccccCCceEEEecCCCCHHHHHHHHHcCCC----------EEEEccc
Q 015899 323 FEV---DNSNTKKLLEGER-GEIIRQKNIIVVGESGLFTPDDIAYVQEAGVK----------AVLVGES 377 (398)
Q Consensus 323 f~v---Dl~~t~~L~~~i~-~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gad----------aVLVGea 377 (398)
-.- |.....+.++... +.......+.+-+.|||+|.+|+..+.++|++ .+-+|.+
T Consensus 198 ~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~~lG~~w~~~~~~RiGtS 266 (281)
T 2a4a_A 198 INATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARRFLSSLACHPDNFRIGSS 266 (281)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHHHTC------CCEEEEES
T ss_pred CCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhhhhccccccccCceEEecC
Confidence 111 3333333332100 00000245789999999999999999999875 5677875
No 266
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=94.82 E-value=0.051 Score=53.17 Aligned_cols=79 Identities=18% Similarity=0.192 Sum_probs=63.8
Q ss_pred CHHHHHHHHHHcCCcEEEEecc---CC---cCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEec
Q 015899 198 DPVEIARSYEKGGAACLSILTD---EK---YFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIA 269 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd---~~---~F~G-s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLia 269 (398)
+..++|+.+++.|++.|+|..- +. ...+ ..+.+..+|+. +++||+.-..|.++.+..++...| ||.|.+.-
T Consensus 230 ~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR 308 (338)
T 1z41_A 230 DHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQ-ADMATGAVGMITDGSMAEEILQNGRADLIFIGR 308 (338)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-HCCEEEECSSCCSHHHHHHHHHTTSCSEEEECH
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHH-CCCCEEEECCCCCHHHHHHHHHcCCceEEeecH
Confidence 5778999999999999999642 11 1122 46778889987 899999999889999999999999 99999988
Q ss_pred cCCChHHH
Q 015899 270 AVLPDLDI 277 (398)
Q Consensus 270 aiL~~~~L 277 (398)
.++.+.++
T Consensus 309 ~~i~nPdl 316 (338)
T 1z41_A 309 ELLRDPFF 316 (338)
T ss_dssp HHHHCTTH
T ss_pred HHHhCchH
Confidence 88865554
No 267
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=94.80 E-value=0.057 Score=49.73 Aligned_cols=76 Identities=9% Similarity=0.064 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCC-------CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEecc
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKG-------SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~G-------s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa 270 (398)
++.+.++.+..+....|.+++-+++.++ .++.++.+++. +++||+.-..|-++.++.++..+|||+|.++.+
T Consensus 144 t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~-~~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsa 222 (248)
T 1geq_A 144 TPDERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRI-CRNKVAVGFGVSKREHVVSLLKEGANGVVVGSA 222 (248)
T ss_dssp CCHHHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhh-cCCCEEEEeecCCHHHHHHHHHcCCCEEEEcHH
Confidence 5677888887763337777765554433 13467777876 789999888888879999999999999999988
Q ss_pred CCCh
Q 015899 271 VLPD 274 (398)
Q Consensus 271 iL~~ 274 (398)
+...
T Consensus 223 i~~~ 226 (248)
T 1geq_A 223 LVKI 226 (248)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 7643
No 268
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=94.76 E-value=0.055 Score=51.09 Aligned_cols=72 Identities=21% Similarity=0.142 Sum_probs=58.4
Q ss_pred CCHHHHHHHHHHcCC-----cEEEEeccCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEecc
Q 015899 197 FDPVEIARSYEKGGA-----ACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA-----~aISVLTd~~~F~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa 270 (398)
.+| +.++.|.+.|+ .-+=... .--.+..+.++.+++. + ++||.....|.++.|+.++.. |||+|.+..+
T Consensus 146 ~~~-e~~~~~a~~g~~~l~~~~Vyl~~--~G~~~~~~~i~~i~~~-~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa 220 (234)
T 2f6u_A 146 IDK-ELAASYALVGEKLFNLPIIYIEY--SGTYGNPELVAEVKKV-LDKARLFYGGGIDSREKAREMLR-YADTIIVGNV 220 (234)
T ss_dssp CCH-HHHHHHHHHHHHTTCCSEEEEEC--TTSCCCHHHHHHHHHH-CSSSEEEEESCCCSHHHHHHHHH-HSSEEEECHH
T ss_pred CCH-HHHHHHHHhhhhhcCCCEEEEeC--CCCcchHHHHHHHHHh-CCCCCEEEEecCCCHHHHHHHHh-CCCEEEEChH
Confidence 377 88999998887 3332222 2246789999999997 8 999999999999999999988 9999999988
Q ss_pred CCC
Q 015899 271 VLP 273 (398)
Q Consensus 271 iL~ 273 (398)
+..
T Consensus 221 ~v~ 223 (234)
T 2f6u_A 221 IYE 223 (234)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 269
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=94.72 E-value=0.91 Score=41.82 Aligned_cols=190 Identities=14% Similarity=0.062 Sum_probs=115.0
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE--Eecc---cc--CCHH-----------HHHHH
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL--LCKE---FI--VDAW-----------QIYYA 257 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV--L~KD---FI--id~~-----------QI~eA 257 (398)
..+..+..+...+.|.++|-+.... +....+.++...+. ..+.+ ++-. ++ .++. .|..|
T Consensus 37 ~~~~~~~l~~~~~~G~~~vEl~~~~--~~~~~~~~~~~l~~-~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a 113 (287)
T 3kws_A 37 GESLNEKLDFMEKLGVVGFEPGGGG--LAGRVNEIKQALNG-RNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAA 113 (287)
T ss_dssp CSSHHHHHHHHHHTTCCEEECBSTT--CGGGHHHHHHHHTT-SSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEEecCCc--hHHHHHHHHHHHHH-cCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3578899999999999999986552 23455555555432 34444 4332 11 2331 46678
Q ss_pred HHcCcCEEEEeccC------C--C-------hHHHHHHHHHHHHcCCcEEEEcC---------CHHHHHHHhccCCCcEE
Q 015899 258 RTKGADAVLLIAAV------L--P-------DLDIRYMTKICKLLGLTALVEVH---------DEREMDRVLGIEGIELI 313 (398)
Q Consensus 258 r~~GADaVLLiaai------L--~-------~~~L~~Li~~a~~LGL~~LVEVh---------t~eEl~rAl~l~Ga~iI 313 (398)
...||+.|.+.... + . -+.|.++.++|+..|+...+|.| +.+++.+.++.-+.+-+
T Consensus 114 ~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~ll~~v~~~~v 193 (287)
T 3kws_A 114 GELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQVADAASLCRDINNPGV 193 (287)
T ss_dssp HHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCHHHHHHHHHHHCCTTE
T ss_pred HHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHcCCCCe
Confidence 89999999875431 1 1 13477788888899999999977 46677666653244557
Q ss_pred eeccccC---cccccChhhH-HHHhhhhcccccccC-CceEEEecC--CCCHHHHHHHHHcCCCEEEEcccccCCCChHH
Q 015899 314 GINNRNL---ETFEVDNSNT-KKLLEGERGEIIRQK-NIIVVGESG--LFTPDDIAYVQEAGVKAVLVGESIVKQDDPGK 386 (398)
Q Consensus 314 GINnRdL---~tf~vDl~~t-~~L~~~i~~~~i~~~-~v~vVAESG--I~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~ 386 (398)
|++ -|. .....|+... .++.+.+.--.+... +.....+|- |.=.+-+..+.+.|+++.++=|..-. .||.+
T Consensus 194 g~~-~D~~h~~~~g~d~~~~l~~~~~~i~~vHlkD~~~r~~pG~G~d~id~~~i~~~L~~~gy~g~i~lE~~~~-~~~~~ 271 (287)
T 3kws_A 194 RCM-GDFWHMTWEETSDMGAFISGGEYLQHVHVASRKRRSMPGEDGDADNYINGFKGLKMIGYNNYVSFECGCQ-GDRNV 271 (287)
T ss_dssp EEE-EEHHHHHHHCSCHHHHHHHHGGGEEEEEECCTTTSCSTTTTGGGCCCHHHHHHHHHTTCCSEEEECCCCS-SCHHH
T ss_pred eEE-eehHHHHhcCCCHHHHHHHhhhhEEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHcCCCccEEEEecCC-CCHHH
Confidence 776 111 1113454333 333332211111111 112225666 77778888999999999998887655 57766
Q ss_pred HHHh
Q 015899 387 GITG 390 (398)
Q Consensus 387 ~i~~ 390 (398)
.+++
T Consensus 272 ~~~~ 275 (287)
T 3kws_A 272 VVPA 275 (287)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 270
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=94.72 E-value=0.045 Score=54.29 Aligned_cols=89 Identities=25% Similarity=0.197 Sum_probs=68.5
Q ss_pred CHHHHHHHHHHcCCcEEEEecc---CC----cCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEe
Q 015899 198 DPVEIARSYEKGGAACLSILTD---EK----YFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLI 268 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd---~~----~F~G-s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLi 268 (398)
+..++|+.+++.|++.|+|-.- +. ...| ..+.++.+|+. +++||+.-..|.++.+..++...| ||.|.+.
T Consensus 247 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 247 ESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRRE-AKLPVTSAWGFGTPQLAEAALQANQLDLVSVG 325 (363)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-HTCCEEECSSTTSHHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHH-cCCcEEEeCCCCCHHHHHHHHHCCCccEEEec
Confidence 6678899999999999999641 11 0112 46778889987 899999999989999999999999 9999998
Q ss_pred ccCCChHHHHHHHHHHHHcCC
Q 015899 269 AAVLPDLDIRYMTKICKLLGL 289 (398)
Q Consensus 269 aaiL~~~~L~~Li~~a~~LGL 289 (398)
-.++.+.++-. +.++.+|+
T Consensus 326 R~~lanPdl~~--k~~~~lg~ 344 (363)
T 3l5l_A 326 RAHLADPHWAY--FAAKELGV 344 (363)
T ss_dssp HHHHHCTTHHH--HHHHHTTC
T ss_pred HHHHhCchHHH--HHHHHcCC
Confidence 88886655432 33456774
No 271
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=94.71 E-value=1.2 Score=40.33 Aligned_cols=189 Identities=12% Similarity=0.084 Sum_probs=112.5
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCC----------cCCCCHHHHHHHHhc--CCCCcE--Eecc--ccCCHH--HHHHHH
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEK----------YFKGSFENLEAVRSA--GVKCPL--LCKE--FIVDAW--QIYYAR 258 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~----------~F~Gs~edL~~Ir~a--~v~lPV--L~KD--FIid~~--QI~eAr 258 (398)
.++.+..+...+.|..+|-+..... .+.-+.+++..+|+. ...+.+ +.-. ..++.+ .+..|.
T Consensus 22 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~ 101 (262)
T 3p6l_A 22 FPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAK 101 (262)
T ss_dssp SCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHH
Confidence 4778888888888888888865431 122345555555432 023433 3221 122332 477888
Q ss_pred HcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC-------CHHHHHHHhccCCCcEEeecc--ccCcccccChhh
Q 015899 259 TKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH-------DEREMDRVLGIEGIELIGINN--RNLETFEVDNSN 329 (398)
Q Consensus 259 ~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh-------t~eEl~rAl~l~Ga~iIGINn--RdL~tf~vDl~~ 329 (398)
..||+.|.+.. ..+.++++.++|+..|+.+.+|.| |.+++.+.++. +.+-+|++- .++.....|+..
T Consensus 102 ~lGa~~v~~~~---~~~~~~~l~~~a~~~gv~l~~En~~~~~~~~~~~~~~~ll~~-~~~~~g~~~D~~h~~~~g~d~~~ 177 (262)
T 3p6l_A 102 AMDLEFITCEP---ALSDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAISG-RSQSLGSCSDVGHWRREGLNQID 177 (262)
T ss_dssp HTTCSEEEECC---CGGGHHHHHHHHHHHTCEEEEECCSSSSSSSSHHHHHHHHTT-SCTTEEEEEEHHHHHHTTCCHHH
T ss_pred HcCCCEEEecC---CHHHHHHHHHHHHHhCCEEEEEeCCCccccCCHHHHHHHHHh-CCCceEEEechHHHHhcCCCHHH
Confidence 99999999864 345689999999999999999987 34678777774 556677761 111111234433
Q ss_pred HHH-HhhhhcccccccC----------CceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHH
Q 015899 330 TKK-LLEGERGEIIRQK----------NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGIT 389 (398)
Q Consensus 330 t~~-L~~~i~~~~i~~~----------~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~ 389 (398)
..+ +.+.+..-.+... ....+.+|-|.=.+-++.+.+.|+++.++=|.-....++...++
T Consensus 178 ~l~~~~~~i~~vH~~D~~~~~~~~~~~~~~~~G~G~id~~~~~~~l~~~gy~g~~~~E~~~~~~~~~~~~~ 248 (262)
T 3p6l_A 178 CLKQLKGRIISLHFKDIAPKKAGENEQHDVIWGTGILDVKGMLKELKSQNFKGVFSIEYEYNWENSVPDIK 248 (262)
T ss_dssp HHHHTTTCEEEEEECEECCCCTTCSCCCEECTTSSSSCHHHHHHHHHHTTCCEEEEECCCSSTTSCHHHHH
T ss_pred HHHHHhhhheEEeeccCCccccCcCccccCCCCCCccCHHHHHHHHHHCCCCeEEEEEeccCcCChHHHHH
Confidence 332 2221111011000 11233456665566778888999999888887655556655544
No 272
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=94.69 E-value=0.14 Score=45.16 Aligned_cols=94 Identities=20% Similarity=0.176 Sum_probs=71.2
Q ss_pred CCHHHHHHHHHHcCCcEEEEec--cCCcCCCC-HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCC
Q 015899 197 FDPVEIARSYEKGGAACLSILT--DEKYFKGS-FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLT--d~~~F~Gs-~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (398)
.++.+.++.+...|+..+-+.. ..+...|- .+.+..+++. +++|++.-..+-++.++.++..+|||+++.+.++..
T Consensus 130 ~~~~~~i~~~~~~~~~~vli~~~~~~g~~~g~~~~~i~~~~~~-~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~ 208 (237)
T 3cwo_X 130 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 208 (237)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTTTCCSCCCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred cCHHHHHHHHhhcCCCeEEEEecCCCCccccccHHHHHHHHHh-cCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHc
Confidence 4688888999988888665543 44444442 6678888776 799999888888899999998999999999888743
Q ss_pred -hHHHHHHHHHHHHcCCcE
Q 015899 274 -DLDIRYMTKICKLLGLTA 291 (398)
Q Consensus 274 -~~~L~~Li~~a~~LGL~~ 291 (398)
+.++.++.+..+..|..+
T Consensus 209 ~~~~~~~~~~~l~~~~~~~ 227 (237)
T 3cwo_X 209 REIDVRELKEYLKKHGVNV 227 (237)
T ss_dssp TSSCHHHHHHHHHTTTCCC
T ss_pred CCCCHHHHHHHHHHCCCce
Confidence 345777777777666543
No 273
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=94.69 E-value=0.22 Score=53.42 Aligned_cols=126 Identities=11% Similarity=0.071 Sum_probs=82.1
Q ss_pred HHHHcCcCEEEEeccC--------------CCh----------HHHHHHHHHHHH-c--CCcEEEEc-------------
Q 015899 256 YARTKGADAVLLIAAV--------------LPD----------LDIRYMTKICKL-L--GLTALVEV------------- 295 (398)
Q Consensus 256 eAr~~GADaVLLiaai--------------L~~----------~~L~~Li~~a~~-L--GL~~LVEV------------- 295 (398)
.|..+|.|+|=|.++- .+| .-+.+.++..++ . +..+.+-+
T Consensus 157 ~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~ 236 (729)
T 1o94_A 157 RSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEA 236 (729)
T ss_dssp HHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCT
T ss_pred HHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCc
Confidence 4567899999987754 111 115556655553 4 34444333
Q ss_pred -CCHHHHHHHhccCCCcEEeeccccCccc-----cc-------ChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHH
Q 015899 296 -HDEREMDRVLGIEGIELIGINNRNLETF-----EV-------DNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIA 362 (398)
Q Consensus 296 -ht~eEl~rAl~l~Ga~iIGINnRdL~tf-----~v-------Dl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~ 362 (398)
.+..++-++++- ++++|.+....+..+ .. +...+.++.+. .++++|+-|||.|++++.
T Consensus 237 ~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--------~~~pvi~~G~i~~~~~a~ 307 (729)
T 1o94_A 237 EVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQV--------SKKPVLGVGRYTDPEKMI 307 (729)
T ss_dssp TTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTT--------CSSCEECCSCCCCHHHHH
T ss_pred hHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHH--------CCCEEEEeCCCCCHHHHH
Confidence 123345666664 788887775532111 00 22333334332 368999999999999999
Q ss_pred HHHHcC-CCEEEEcccccCCCChHHHHHh
Q 015899 363 YVQEAG-VKAVLVGESIVKQDDPGKGITG 390 (398)
Q Consensus 363 ~l~~~G-adaVLVGeaLmk~~dp~~~i~~ 390 (398)
++.+.| ||+|.+|.+++..+|....+++
T Consensus 308 ~~l~~g~aD~V~~gR~~l~~P~~~~~~~~ 336 (729)
T 1o94_A 308 EIVTKGYADIIGCARPSIADPFLPQKVEQ 336 (729)
T ss_dssp HHHHTTSCSBEEESHHHHHCTTHHHHHHT
T ss_pred HHHHCCCCCEEEeCchhhcCchHHHHHHc
Confidence 999998 9999999999999998877754
No 274
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=94.61 E-value=0.06 Score=53.11 Aligned_cols=72 Identities=32% Similarity=0.302 Sum_probs=56.6
Q ss_pred HHHHHHHHcCCcEEEEec-cC----CcC----------CCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEE
Q 015899 201 EIARSYEKGGAACLSILT-DE----KYF----------KGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAV 265 (398)
Q Consensus 201 ~iA~aY~~~GA~aISVLT-d~----~~F----------~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaV 265 (398)
+.|+..++.||++|.|-. +. ..| .+.++.+..+++. +++||+.-..|.++..+.++..+|||+|
T Consensus 156 ~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~-~~iPViaaGGI~~~~~~~~~l~~GAd~V 234 (369)
T 3bw2_A 156 EEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREA-VDIPVVAAGGIMRGGQIAAVLAAGADAA 234 (369)
T ss_dssp HHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHH-CSSCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHh-cCceEEEECCCCCHHHHHHHHHcCCCEE
Confidence 357788889999999821 11 111 1337788888886 8999999888889999999999999999
Q ss_pred EEeccCCC
Q 015899 266 LLIAAVLP 273 (398)
Q Consensus 266 LLiaaiL~ 273 (398)
.+...++.
T Consensus 235 ~vGs~~~~ 242 (369)
T 3bw2_A 235 QLGTAFLA 242 (369)
T ss_dssp EESHHHHT
T ss_pred EEChHHhC
Confidence 99988764
No 275
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=94.59 E-value=1.8 Score=43.62 Aligned_cols=183 Identities=12% Similarity=0.060 Sum_probs=113.3
Q ss_pred CceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEe-----c--cCCc--CCC--------------------C
Q 015899 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSIL-----T--DEKY--FKG--------------------S 226 (398)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVL-----T--d~~~--F~G--------------------s 226 (398)
.+-||||+--. ..|.+ .-..+++.+..++||+|+.-= | -+.. |++ .
T Consensus 28 ~~~IIAEiG~N--H~Gsl---e~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~ 102 (385)
T 1vli_A 28 PVFIIAEAGIN--HDGKL---DQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEW 102 (385)
T ss_dssp CCEEEEEEETT--TTTCH---HHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGG
T ss_pred CcEEEEeecCc--ccccH---HHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHH
Confidence 57899999211 11211 135677888999999999753 1 1211 441 3
Q ss_pred HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEc--CCHHHHHHH
Q 015899 227 FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEV--HDEREMDRV 304 (398)
Q Consensus 227 ~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEV--ht~eEl~rA 304 (398)
+..|...++. ..+|+++-=| |+.++.....+|+|++=+.+.-+.+- .|++.+.+.|..+++-. .|.+|++.|
T Consensus 103 ~~~L~~~~~~-~Gi~~~stpf--D~~svd~l~~~~vd~~KIgS~~~~N~---pLL~~va~~gKPViLStGmaTl~Ei~~A 176 (385)
T 1vli_A 103 ILPLLDYCRE-KQVIFLSTVC--DEGSADLLQSTSPSAFKIASYEINHL---PLLKYVARLNRPMIFSTAGAEISDVHEA 176 (385)
T ss_dssp HHHHHHHHHH-TTCEEECBCC--SHHHHHHHHTTCCSCEEECGGGTTCH---HHHHHHHTTCSCEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHHH-cCCcEEEccC--CHHHHHHHHhcCCCEEEECcccccCH---HHHHHHHhcCCeEEEECCCCCHHHHHHH
Confidence 3445555555 6888887665 89999988889999999999888773 35555666788887766 488888887
Q ss_pred hcc---CCC-cEE---eeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCC-HHHHHHHHHcCCCEEEEcc
Q 015899 305 LGI---EGI-ELI---GINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFT-PDDIAYVQEAGVKAVLVGE 376 (398)
Q Consensus 305 l~l---~Ga-~iI---GINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t-~eD~~~l~~~GadaVLVGe 376 (398)
++. .|. +++ ++.++.-....+|+.....|.+.. .+++|.-.+--.. ..-......+||+ +|=.
T Consensus 177 ve~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f-------~~lpVG~SdHt~G~~~~~~AAvAlGA~--iIEk 247 (385)
T 1vli_A 177 WRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAF-------PEAVIGFSDHSEHPTEAPCAAVRLGAK--LIEK 247 (385)
T ss_dssp HHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHS-------TTSEEEEEECCSSSSHHHHHHHHTTCS--EEEE
T ss_pred HHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHc-------CCCCEEeCCCCCCchHHHHHHHHcCCC--EEEe
Confidence 643 254 443 444443333567877766654431 1345544332223 4445555678999 5544
Q ss_pred cc
Q 015899 377 SI 378 (398)
Q Consensus 377 aL 378 (398)
-+
T Consensus 248 Hf 249 (385)
T 1vli_A 248 HF 249 (385)
T ss_dssp EB
T ss_pred CC
Confidence 44
No 276
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=94.59 E-value=3.6 Score=39.88 Aligned_cols=167 Identities=16% Similarity=0.153 Sum_probs=101.7
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHHHHHHH----Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFENLEAV----RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL~~I----r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++.+.+.+.|+++|-++ |--+++.=+.+.-.++ .+. .-.+||+..=.-.+.. +...|..+|||+|+++.
T Consensus 47 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 47 AKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp HHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 344566778999999887 2222332244333322 222 2368999754433443 34466789999999987
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEEc--------CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGE 337 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVEV--------ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i 337 (398)
-.. +++. .+++-..|...++.+++=- =+.+.+.+..+. ..++||-.. .-|+....+++...
T Consensus 127 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiKds-----sgd~~~~~~~~~~~ 199 (314)
T 3qze_A 127 PYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKV--PNIIGIKEA-----TGDLQRAKEVIERV 199 (314)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHTS--TTEEEEEEC-----SCCHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcC--CCEEEEEcC-----CCCHHHHHHHHHHc
Confidence 643 4444 4555566677788886531 145666666554 579999732 34777777777642
Q ss_pred cccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 338 RGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 338 ~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
+.+..+. +|-. +.+.....+|++|++-|.+=+-++-
T Consensus 200 ------~~~f~v~--~G~d--~~~l~~l~~Ga~G~is~~an~~P~~ 235 (314)
T 3qze_A 200 ------GKDFLVY--SGDD--ATAVELMLLGGKGNISVTANVAPRA 235 (314)
T ss_dssp ------CTTSEEE--ESCG--GGHHHHHHTTCCEEEESGGGTCHHH
T ss_pred ------CCCeEEE--ecCh--HHHHHHHHCCCCEEEecHHhhhHHH
Confidence 2344443 3432 2356677899999998887655433
No 277
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=94.59 E-value=0.098 Score=52.20 Aligned_cols=72 Identities=19% Similarity=0.145 Sum_probs=56.2
Q ss_pred HHHHHHHHHcCCcEEEEeccC--CcCC--CCHHHHHHHHhcCC--CCcEEeccccCCHHHHHHHHHcCcCEEEEeccCC
Q 015899 200 VEIARSYEKGGAACLSILTDE--KYFK--GSFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~--~~F~--Gs~edL~~Ir~a~v--~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (398)
.+.|+..++.||++|.|-.-. ...+ .+++-|..++++ + ++||+.-..|.+..++.+|.++|||+|.+....|
T Consensus 228 ~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~a-v~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l 305 (352)
T 3sgz_A 228 KEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAA-VKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPIL 305 (352)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHH-HTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHH-hCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 377999999999999983211 1111 235677777765 5 7999999999999999999999999999987655
No 278
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=94.58 E-value=0.097 Score=52.41 Aligned_cols=44 Identities=14% Similarity=0.139 Sum_probs=40.3
Q ss_pred CceEEEecCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHh
Q 015899 346 NIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITG 390 (398)
Q Consensus 346 ~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~ 390 (398)
++++|+-||| |++++.++.+.| ||.|.+|.+++..++....+++
T Consensus 307 ~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~ 351 (379)
T 3aty_A 307 SGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQ 351 (379)
T ss_dssp CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred CCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHhCcHHHHHHHc
Confidence 5789999999 999999999998 9999999999999998877764
No 279
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=94.57 E-value=0.1 Score=60.59 Aligned_cols=107 Identities=11% Similarity=0.045 Sum_probs=70.6
Q ss_pred CChHHHHHHHHHHHHc--CCcEEEEc----CCHHHHHHHhccCCCcEEeeccccCccc-c-------cChhhHHHHhhhh
Q 015899 272 LPDLDIRYMTKICKLL--GLTALVEV----HDEREMDRVLGIEGIELIGINNRNLETF-E-------VDNSNTKKLLEGE 337 (398)
Q Consensus 272 L~~~~L~~Li~~a~~L--GL~~LVEV----ht~eEl~rAl~l~Ga~iIGINnRdL~tf-~-------vDl~~t~~L~~~i 337 (398)
.+.+++.++++..++. +..+.|-+ ...+++..+.++ |++.|-|.+.+--|- . .-+. +..++..+
T Consensus 1010 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kA-GAD~IvVsG~eGGTgasp~~~~~~~GlP-t~~aL~ev 1087 (1520)
T 1ofd_A 1010 YSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKA-NADIIQISGHDGGTGASPLSSIKHAGSP-WELGVTEV 1087 (1520)
T ss_dssp SSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHT-TCSEEEEECTTCCCSSEEHHHHHHBCCC-HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHc-CCCEEEEeCCCCccCCCcchhhcCCchh-HHHHHHHH
Confidence 3456678888877765 56665543 246777888887 999998876642220 0 0011 12222221
Q ss_pred cc----cccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 338 RG----EIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 338 ~~----~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
.. ..+ ...+++|+.|||.|..|+.++..+||++|-+|+++|..
T Consensus 1088 ~~al~~~gl-r~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a 1134 (1520)
T 1ofd_A 1088 HRVLMENQL-RDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIA 1134 (1520)
T ss_dssp HHHHHHTTC-GGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHH
T ss_pred HHHHHhcCC-CCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHH
Confidence 11 001 12589999999999999999999999999999998653
No 280
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=94.55 E-value=0.07 Score=50.87 Aligned_cols=181 Identities=14% Similarity=0.113 Sum_probs=106.9
Q ss_pred HHHHHHHHHHcCC-cEEEEeccCCcCCCCHHHHHHHHhcC--CCCcEEeccc----------cCCHHHHHHHHHcCcCEE
Q 015899 199 PVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAG--VKCPLLCKEF----------IVDAWQIYYARTKGADAV 265 (398)
Q Consensus 199 p~~iA~aY~~~GA-~aISVLTd~~~F~Gs~edL~~Ir~a~--v~lPVL~KDF----------Iid~~QI~eAr~~GADaV 265 (398)
..++++.....-. ..+-|+.-|.|- +|..+++.. .++.|-..|. =+.+.++ +.+||+.|
T Consensus 19 ~~~~~~~l~~~~~~~~vev~v~Pp~~-----~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~mL---~d~G~~~V 90 (247)
T 1ney_A 19 IKEIVERLNTASIPENVEVVICPPAT-----YLDYSVSLVKKPQVTVGAQNAYLKASGAFTGENSVDQI---KDVGAKYV 90 (247)
T ss_dssp HHHHHHHHHHSCCCTTEEEEEECCGG-----GHHHHHHHCCCTTEEEEESCCCSSSSBSCTTCCCHHHH---HHTTCCEE
T ss_pred HHHHHHHHHhhccccCceEEEeCcHH-----HHHHHHHHhcCCCceEEeccCCCCCCCCccCccCHHHH---HHcCCCEE
Confidence 3345555544211 124555455444 787777641 1344544442 1555554 56799999
Q ss_pred EEeccC----C--ChHHHHHHHHHHHHcCCcEEEEcCC-HHHH-------------HHHhc----cCCCcEEeeccc-cC
Q 015899 266 LLIAAV----L--PDLDIRYMTKICKLLGLTALVEVHD-EREM-------------DRVLG----IEGIELIGINNR-NL 320 (398)
Q Consensus 266 LLiaai----L--~~~~L~~Li~~a~~LGL~~LVEVht-~eEl-------------~rAl~----l~Ga~iIGINnR-dL 320 (398)
+|+.+= + +++.+..=++.|.+.||.++++|-. ++|- +.++. + ...+|..-.. -.
T Consensus 91 iiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~-~~~vIAYEPvWAI 169 (247)
T 1ney_A 91 ILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDF-TNVVVAYEPVXAI 169 (247)
T ss_dssp EESCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCCCC-TTEEEEECCGGGT
T ss_pred EECChhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHHhchhhh-cCEEEEECChhhc
Confidence 999982 3 4666788888899999999999974 4432 11332 1 1223332210 00
Q ss_pred -cccccChhhHHHHhhhhcc---cccc---cCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHH
Q 015899 321 -ETFEVDNSNTKKLLEGERG---EIIR---QKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGIT 389 (398)
Q Consensus 321 -~tf~vDl~~t~~L~~~i~~---~~i~---~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~ 389 (398)
+.-.-+.+...+....+|. ..+- ...+.++..|+++..+....+...++||+|||.+-++ ++..+.++
T Consensus 170 GTG~~Atpe~a~evh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~Ii~ 244 (247)
T 1ney_A 170 GTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLK-PEFVDIIN 244 (247)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEESSCCTTTGGGGTTCTTCCEEEESGGGGS-THHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCCcCHhHHHHHHcCCCCCeeEeehHHHH-HHHHHHHH
Confidence 0112234444444333332 0000 1247899999998888888888899999999999999 87766553
No 281
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=94.51 E-value=2.4 Score=40.44 Aligned_cols=164 Identities=12% Similarity=0.049 Sum_probs=99.2
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHH-HHHHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFE-NLEAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~e-dL~~I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++++.+.+.|+++|-++ |--+++.=+.+ ..+.+ ++. .-.+||+..=.-.+.. +...|..+|||+|++..
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (292)
T 2vc6_A 24 HDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVS 103 (292)
T ss_dssp HHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcC
Confidence 456677889999999886 22222222333 32222 322 2368999654433433 24456788999999988
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEE-------c-CCHHHHHHHhc-cCCCcEEeeccccCcccccChhhHHHHhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVE-------V-HDEREMDRVLG-IEGIELIGINNRNLETFEVDNSNTKKLLEG 336 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVE-------V-ht~eEl~rAl~-l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~ 336 (398)
-.. +++. .+++-..+...++.+++= + -+.+.+.+..+ . ..++||-.. .-|+....+++..
T Consensus 104 P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pnIvgiK~s-----~gd~~~~~~~~~~ 176 (292)
T 2vc6_A 104 PYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDC--PNVKGVXDA-----TGNLLRPSLERMA 176 (292)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHC--TTEEEEEEC-----SCCTHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhC--CCEEEEecC-----CCCHHHHHHHHHH
Confidence 754 5555 445556677788888761 1 15566666555 4 479999732 2366777777664
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 380 (398)
. +.+..+. +|-. +.+.....+|++|++-|.+=+-
T Consensus 177 ~------~~~f~v~--~G~d--~~~~~~l~~G~~G~is~~~n~~ 210 (292)
T 2vc6_A 177 C------GEDFNLL--TGED--GTALGYMAHGGHGCISVTANVA 210 (292)
T ss_dssp S------CTTSEEE--ESCG--GGHHHHHHTTCCEEEESGGGTC
T ss_pred c------CCCEEEE--ECch--HHHHHHHHcCCCEEEecHHHhC
Confidence 2 2344443 4432 3355667899999999877554
No 282
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=94.45 E-value=1.1 Score=44.36 Aligned_cols=132 Identities=12% Similarity=0.161 Sum_probs=96.2
Q ss_pred CCCcE-EeccccCCHHHHHHHHHcCcCEEEEeccCCChHH----HHHHHHHHHHcCCcEEEEc----------------C
Q 015899 238 VKCPL-LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD----IRYMTKICKLLGLTALVEV----------------H 296 (398)
Q Consensus 238 v~lPV-L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~----L~~Li~~a~~LGL~~LVEV----------------h 296 (398)
.++|| |.-|-.-+...+.+|..+|-+.|.++.+-++-++ .++++++||..|+.+=.|+ .
T Consensus 74 ~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~v~~~~~yT 153 (323)
T 2isw_A 74 PDIPICIHLDHGDTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDVQNTVQLT 153 (323)
T ss_dssp TTSCEEEEEEEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------CCCC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccCCccCcccccccC
Confidence 57897 5677777788899999999999999999998543 7889999998887762222 4
Q ss_pred CHHHHHHHhccCCCcEEeeccc----cCc---ccc--cChhhHHHHhhhhcccccccCCceEEEec--------------
Q 015899 297 DEREMDRVLGIEGIELIGINNR----NLE---TFE--VDNSNTKKLLEGERGEIIRQKNIIVVGES-------------- 353 (398)
Q Consensus 297 t~eEl~rAl~l~Ga~iIGINnR----dL~---tf~--vDl~~t~~L~~~i~~~~i~~~~v~vVAES-------------- 353 (398)
|++|+.+..+..|++.+.+.-= .++ +-. .|++...++.+.+ ++++|.=|
T Consensus 154 dPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~--------~vpLVlHGgSsvp~~~~~~~~~ 225 (323)
T 2isw_A 154 EPQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLT--------GIPLVMHGSSSVPKDVKDMINK 225 (323)
T ss_dssp CHHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHH--------CSCEEECSCCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHh--------CCCeEEECCCCCCHHHHHHHHH
Confidence 6777777664348898876522 222 223 6777777775542 45566555
Q ss_pred ---------CCCCHHHHHHHHHcCCCEEEEcccc
Q 015899 354 ---------GLFTPDDIAYVQEAGVKAVLVGESI 378 (398)
Q Consensus 354 ---------GI~t~eD~~~l~~~GadaVLVGeaL 378 (398)
|+ ..++++++.++|+.-|=|++-+
T Consensus 226 ~gg~~~~~~Gv-p~e~i~~ai~~GV~KiNi~Tdl 258 (323)
T 2isw_A 226 YGGKMPDAVGV-PIESIVHAIGEGVCKINVDSDS 258 (323)
T ss_dssp TTCCCTTCBCC-CHHHHHHHHHTTEEEEEECHHH
T ss_pred hccccccCCCC-CHHHHHHHHHCCCeEEEEChHH
Confidence 77 7789999999999999998876
No 283
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=94.44 E-value=0.26 Score=47.47 Aligned_cols=87 Identities=18% Similarity=0.265 Sum_probs=68.0
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEe
Q 015899 273 PDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGE 352 (398)
Q Consensus 273 ~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAE 352 (398)
..+.++.|.++++++||.++.|++|.+.++.+.++ ++++-|..|+.+++ ....++.+ .+.+|+..
T Consensus 87 g~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~--vd~~kIgs~~~~n~----~ll~~~a~---------~~kPV~lk 151 (276)
T 1vs1_A 87 GLEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY--ADMLQIGARNMQNF----PLLREVGR---------SGKPVLLK 151 (276)
T ss_dssp THHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH--CSEEEECGGGTTCH----HHHHHHHH---------HTCCEEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh--CCeEEECcccccCH----HHHHHHHc---------cCCeEEEc
Confidence 35679999999999999999999999999999886 79999998888653 33333332 36788889
Q ss_pred cCCC-CHHHHHH----HHHcCCCEEEE
Q 015899 353 SGLF-TPDDIAY----VQEAGVKAVLV 374 (398)
Q Consensus 353 SGI~-t~eD~~~----l~~~GadaVLV 374 (398)
-|.. |++++.. +...|..-+++
T Consensus 152 ~G~~~t~~ei~~Ave~i~~~Gn~~i~L 178 (276)
T 1vs1_A 152 RGFGNTVEELLAAAEYILLEGNWQVVL 178 (276)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEE
Confidence 9997 9998866 45568855555
No 284
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=94.43 E-value=0.081 Score=51.21 Aligned_cols=94 Identities=18% Similarity=0.145 Sum_probs=67.4
Q ss_pred ccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEec-cCCcCC-----CCHHHHHHHH
Q 015899 161 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT-DEKYFK-----GSFENLEAVR 234 (398)
Q Consensus 161 ~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLT-d~~~F~-----Gs~edL~~Ir 234 (398)
.++.+.++.. ...+|.-+ . ++ +.|+...+.||++|-+-. +.+... ..++.+..++
T Consensus 108 ~~~~~~l~~~-----gi~vi~~v--~-----------t~-~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~ 168 (328)
T 2gjl_A 108 GEHIAEFRRH-----GVKVIHKC--T-----------AV-RHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAA 168 (328)
T ss_dssp HHHHHHHHHT-----TCEEEEEE--S-----------SH-HHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHc-----CCCEEeeC--C-----------CH-HHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHH
Confidence 5677777653 24566433 1 22 457777888999999732 111111 3457788888
Q ss_pred hcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCCh
Q 015899 235 SAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (398)
Q Consensus 235 ~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~ 274 (398)
+. +++||+.-..|.++.++.++..+|||+|.+..+++..
T Consensus 169 ~~-~~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~ 207 (328)
T 2gjl_A 169 NR-LRVPIIASGGFADGRGLVAALALGADAINMGTRFLAT 207 (328)
T ss_dssp TT-CCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTS
T ss_pred Hh-cCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcC
Confidence 76 8999999888889999999999999999999887643
No 285
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=94.43 E-value=0.19 Score=48.07 Aligned_cols=180 Identities=8% Similarity=0.061 Sum_probs=103.7
Q ss_pred HHHHHHHHHHcCC-cEEEEeccCCcCCCCHHHHHHHHhcC-CCCcEEeccc----------cCCHHHHHHHHHcCcCEEE
Q 015899 199 PVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAG-VKCPLLCKEF----------IVDAWQIYYARTKGADAVL 266 (398)
Q Consensus 199 p~~iA~aY~~~GA-~aISVLTd~~~F~Gs~edL~~Ir~a~-v~lPVL~KDF----------Iid~~QI~eAr~~GADaVL 266 (398)
..++++....... ..+-|+.-|.|- +|..+++.. .++.|-..|. =+++.+ .+.+||+.|+
T Consensus 23 ~~~l~~~l~~~~~~~~~ev~v~Pp~~-----~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~m---L~d~G~~~Vi 94 (255)
T 3qst_A 23 AEKLVEMLNGAKVEGNVEVVVAAPFV-----FLPTLQQKLRKDWKVSAENVFTKPNGAFTGEVTVPM---IKSFGIEWTI 94 (255)
T ss_dssp HHHHHHHHHTCCCCSSCEEEEECCGG-----GHHHHHHHSCTTSEEEESCCCSSSSSSCTTCCCHHH---HHTTTCCEEE
T ss_pred HHHHHHHHHhhcccCCceEEEeCCHH-----HHHHHHHHhccCCeEEecccCCCCCCCccCccCHHH---HHHcCCCEEE
Confidence 4455555554211 114454445444 788887641 2455655551 145555 4567999999
Q ss_pred Eecc----CC--ChHHHHHHHHHHHHcCCcEEEEcCC-HHH-------------HHHHhcc---C--CCcEEeeccc-cC
Q 015899 267 LIAA----VL--PDLDIRYMTKICKLLGLTALVEVHD-ERE-------------MDRVLGI---E--GIELIGINNR-NL 320 (398)
Q Consensus 267 Liaa----iL--~~~~L~~Li~~a~~LGL~~LVEVht-~eE-------------l~rAl~l---~--Ga~iIGINnR-dL 320 (398)
|+.+ .+ +++.+..=++.|.+.||.++++|.. ++| ++.++.- . ...+|..-.. -.
T Consensus 95 iGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPvWAI 174 (255)
T 3qst_A 95 LGHSERRDILKEDDEFLAAKAKFALENGMKIIYCCGEHLSEREAGKASEFVSAQIEKMIPAIPAGKWDDVVIAYEPIWAI 174 (255)
T ss_dssp ESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHGGGSCTTCGGGEEEEECCGGGS
T ss_pred ECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHHcCCHHHHHHHHHHHHHccCCHHHhCCEEEEECCHHHh
Confidence 9998 33 4556777788899999999999974 443 3344421 0 1113322110 00
Q ss_pred -cccccChhhHHHHhhhhccc---ccc---cCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHH
Q 015899 321 -ETFEVDNSNTKKLLEGERGE---IIR---QKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKG 387 (398)
Q Consensus 321 -~tf~vDl~~t~~L~~~i~~~---~i~---~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~ 387 (398)
+.-.-+.+...+....+|.- .+. ...+.++..|+++.-+....+...++||+|||.+=.+ ++-.+.
T Consensus 175 GTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~-~~F~~I 247 (255)
T 3qst_A 175 GTGKVASTQDAQEMCKVIRDILAAKVGADIANKVRILYGGSVKPNNCNELAACPDVDGFLVGGASLE-AGFINI 247 (255)
T ss_dssp SSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCTTTHHHHHHSTTCCEEEECGGGGS-TTHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCcCHhHHHHHhcCCCCCEEEeeHHHhh-HHHHHH
Confidence 00112344444433332221 000 1247889999998777778888899999999999999 454333
No 286
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=94.42 E-value=0.44 Score=48.65 Aligned_cols=138 Identities=10% Similarity=0.075 Sum_probs=95.0
Q ss_pred CCCc----EEeccccCCH---------------HHHHHHHHcCcCEEEEeccC------C--ChHH----HHHHHHHHHH
Q 015899 238 VKCP----LLCKEFIVDA---------------WQIYYARTKGADAVLLIAAV------L--PDLD----IRYMTKICKL 286 (398)
Q Consensus 238 v~lP----VL~KDFIid~---------------~QI~eAr~~GADaVLLiaai------L--~~~~----L~~Li~~a~~ 286 (398)
.++| +|.-|-.-+. ..|.++..+|-+.|.++++. + ++.- .++++++|+.
T Consensus 75 ~~vP~~~VaLHlDHg~~~~w~~~~~~~am~~a~e~i~~aI~aGFtSVMiD~S~~~~~~~~pl~eNi~~~rt~elv~~Ah~ 154 (420)
T 2fiq_A 75 VGFARERIILGGDHLGPNCWQQENVDAAMEKSVELVKAYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAES 154 (420)
T ss_dssp HTCCGGGEEEEEEEESSGGGTTSBHHHHHHHHHHHHHHHHHTTCCEEEECCCSCCBTCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCcCcceEEEECCCCCCccccccchhhhhhhHHHHHHHHHHhCCCEEEECCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 4677 4677876565 66888999999999999998 4 4322 3788999997
Q ss_pred c-------------CCc---------EEEE--cCCHHHHHHHhc-------cCCCcE-----------EeeccccCcccc
Q 015899 287 L-------------GLT---------ALVE--VHDEREMDRVLG-------IEGIEL-----------IGINNRNLETFE 324 (398)
Q Consensus 287 L-------------GL~---------~LVE--Vht~eEl~rAl~-------l~Ga~i-----------IGINnRdL~tf~ 324 (398)
. |.+ ..-+ ..|++|+..-++ ..|.+. +|+..-.+..-.
T Consensus 155 ~~~~~~eaElG~vgG~Ev~v~~~~~~~~~~~~~T~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y~~~~ 234 (420)
T 2fiq_A 155 VATDCQREQLSYVIGTEVPVPGGEASAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIH 234 (420)
T ss_dssp HCCHHHHHHCEEEEECSSCC----------CCCCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSSCEEC
T ss_pred HcccCCcccceEEeeeecCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCCCCCC
Confidence 4 222 1112 578999988875 347665 343333345667
Q ss_pred cChhhHHHHhhhhcccccccCCceE--EEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 325 VDNSNTKKLLEGERGEIIRQKNIIV--VGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 325 vDl~~t~~L~~~i~~~~i~~~~v~v--VAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
.|++.+.+|.+.+. .+++++ =+.||+ +.++++++.+.|+.-+=||+.|...
T Consensus 235 ld~e~l~~I~~~v~-----~P~LVle~HGgSg~-~~e~l~~~v~~Gi~kiNV~t~l~~a 287 (420)
T 2fiq_A 235 YQPQEAQALAQWIE-----NTRMVYEAHSTDYQ-TRTAYWELVRDHFAILKVGPALTFA 287 (420)
T ss_dssp CCGGGGHHHHHHHT-----TSSCEEEESCCTTC-CHHHHHHHHHTTEEEEEECHHHHHH
T ss_pred cCHHHHHHHHHhcC-----CCCEEEecCCCCCC-CHHHHHHHHHcCCCEEEECHHHHHH
Confidence 88999999887631 112333 245666 8889999999999999999887653
No 287
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=94.42 E-value=0.16 Score=49.42 Aligned_cols=88 Identities=11% Similarity=0.083 Sum_probs=55.4
Q ss_pred CCCHHHHHHHHhcCCCCcEE--eccccCCHHHHHHHHHcCcCEEEEeccCCC---hHH-HHHHHHHHHHcCCcEEEEcCC
Q 015899 224 KGSFENLEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLP---DLD-IRYMTKICKLLGLTALVEVHD 297 (398)
Q Consensus 224 ~Gs~edL~~Ir~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL~---~~~-L~~Li~~a~~LGL~~LVEVht 297 (398)
+-+++.|..+++. +++||+ .-..|-+|.+..++..+|||+|+++.+++. +.. .+.|.+... .. .|
T Consensus 184 ~ad~elI~~Ike~-~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Akafv~Av~-~~-------~~ 254 (291)
T 3o07_A 184 RVPVSLLKDVLEK-GKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATAVVEATT-HF-------DN 254 (291)
T ss_dssp TSCHHHHHHHHHH-TSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHH-TT-------TC
T ss_pred CCCHHHHHHHHHc-cCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHHHHHHHHH-hc-------cC
Confidence 4578899999987 899995 467777999999999999999999999885 433 444444332 22 44
Q ss_pred HHHHHHHhccCCCcEEeeccccC
Q 015899 298 EREMDRVLGIEGIELIGINNRNL 320 (398)
Q Consensus 298 ~eEl~rAl~l~Ga~iIGINnRdL 320 (398)
++-+..+.+--|-.+.|+|..++
T Consensus 255 ~~~~~~~s~~l~~~m~g~~~~~~ 277 (291)
T 3o07_A 255 PSKLLEVSSDLGELMGGVSIESI 277 (291)
T ss_dssp HHHHHHHHSSCCCC---------
T ss_pred HHHHHHHHhcccccccCcchhhh
Confidence 55544443322667999987766
No 288
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=94.40 E-value=0.064 Score=52.47 Aligned_cols=73 Identities=19% Similarity=0.182 Sum_probs=56.0
Q ss_pred HHHHHHHHHcCCcEEEEe-c-----------cCC-----cCCC---CHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHH
Q 015899 200 VEIARSYEKGGAACLSIL-T-----------DEK-----YFKG---SFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYAR 258 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-T-----------d~~-----~F~G---s~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr 258 (398)
.+.|+.+.+.||++|.|- + .+. +..+ +.+.|..+++. + ++||+.-..|.++.++.++.
T Consensus 192 ~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~-~~~ipvia~GGI~~~~d~~k~l 270 (349)
T 1p0k_A 192 KASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSE-FPASTMIASGGLQDALDVAKAI 270 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHH-CTTSEEEEESSCCSHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHh-cCCCeEEEECCCCCHHHHHHHH
Confidence 467889999999999984 1 110 0122 45567777775 5 89999999999999999999
Q ss_pred HcCcCEEEEeccCCC
Q 015899 259 TKGADAVLLIAAVLP 273 (398)
Q Consensus 259 ~~GADaVLLiaaiL~ 273 (398)
.+|||+|.+...++-
T Consensus 271 ~~GAd~V~iG~~~l~ 285 (349)
T 1p0k_A 271 ALGASCTGMAGHFLK 285 (349)
T ss_dssp HTTCSEEEECHHHHH
T ss_pred HcCCCEEEEcHHHHH
Confidence 999999999887663
No 289
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=94.40 E-value=0.16 Score=48.90 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=67.9
Q ss_pred CceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEe-ccCCcCCCCHHHHHHHHhcCC--CCcEEeccccCCHH
Q 015899 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSIL-TDEKYFKGSFENLEAVRSAGV--KCPLLCKEFIVDAW 252 (398)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL~~Ir~a~v--~lPVL~KDFIid~~ 252 (398)
.+.+++|+ .+..++.+ +.+.||+.|.|. .+-.-|.=+++....+.+. + ++|+++-..|-++.
T Consensus 169 Gl~~lvev-------------h~~eEl~~-A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~-ip~~~~vIaesGI~t~e 233 (272)
T 3tsm_A 169 GMDALIEV-------------HDEAEMER-ALKLSSRLLGVNNRNLRSFEVNLAVSERLAKM-APSDRLLVGESGIFTHE 233 (272)
T ss_dssp TCEEEEEE-------------CSHHHHHH-HTTSCCSEEEEECBCTTTCCBCTHHHHHHHHH-SCTTSEEEEESSCCSHH
T ss_pred CCeEEEEe-------------CCHHHHHH-HHhcCCCEEEECCCCCccCCCChHHHHHHHHh-CCCCCcEEEECCCCCHH
Confidence 46888998 26667644 446899999997 3444455577777777665 4 68999999999999
Q ss_pred HHHHHHHcCcCEEEEeccCCChHHHH
Q 015899 253 QIYYARTKGADAVLLIAAVLPDLDIR 278 (398)
Q Consensus 253 QI~eAr~~GADaVLLiaaiL~~~~L~ 278 (398)
++..++.+|||+||++.++...++..
T Consensus 234 dv~~l~~~Ga~gvLVG~almr~~d~~ 259 (272)
T 3tsm_A 234 DCLRLEKSGIGTFLIGESLMRQHDVA 259 (272)
T ss_dssp HHHHHHTTTCCEEEECHHHHTSSCHH
T ss_pred HHHHHHHcCCCEEEEcHHHcCCcCHH
Confidence 99999999999999999987544433
No 290
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=94.36 E-value=0.1 Score=58.29 Aligned_cols=75 Identities=25% Similarity=0.257 Sum_probs=60.9
Q ss_pred CHHHHHHHHHHcCCcEEEEe------------------------ccCCcCCCC------HHHHHHHHhcCC-CCcEEecc
Q 015899 198 DPVEIARSYEKGGAACLSIL------------------------TDEKYFKGS------FENLEAVRSAGV-KCPLLCKE 246 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVL------------------------Td~~~F~Gs------~edL~~Ir~a~v-~lPVL~KD 246 (398)
+..++|+.++++||++|++. +..+.+.|. ++.+..+++. + ++||+.-.
T Consensus 716 ~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~-~~~ipvi~~G 794 (1025)
T 1gte_A 716 DIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARA-LPGFPILATG 794 (1025)
T ss_dssp CHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHH-STTCCEEEES
T ss_pred HHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHH-cCCCCEEEec
Confidence 78999999999999999992 111122232 3578888886 7 89999999
Q ss_pred ccCCHHHHHHHHHcCcCEEEEeccCCC
Q 015899 247 FIVDAWQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 247 FIid~~QI~eAr~~GADaVLLiaaiL~ 273 (398)
.|.+..++.++..+|||+|.+..+++.
T Consensus 795 GI~s~~da~~~l~~Ga~~v~vg~~~l~ 821 (1025)
T 1gte_A 795 GIDSAESGLQFLHSGASVLQVCSAVQN 821 (1025)
T ss_dssp SCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred CcCCHHHHHHHHHcCCCEEEEeecccc
Confidence 999999999999999999999887773
No 291
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=94.34 E-value=0.27 Score=49.05 Aligned_cols=87 Identities=21% Similarity=0.344 Sum_probs=68.2
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEe
Q 015899 273 PDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGE 352 (398)
Q Consensus 273 ~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAE 352 (398)
..+.|+.|.++++++||.++.|++|.+.++.+.++ ++++-|..|+.+++ ....++.+ .+.+++..
T Consensus 155 g~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~--vd~lkIgAr~~~n~----~LL~~va~---------~~kPVilk 219 (350)
T 1vr6_A 155 GEKGLEYLREAADKYGMYVVTEALGEDDLPKVAEY--ADIIQIGARNAQNF----RLLSKAGS---------YNKPVLLK 219 (350)
T ss_dssp THHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHH--CSEEEECGGGTTCH----HHHHHHHT---------TCSCEEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHh--CCEEEECcccccCH----HHHHHHHc---------cCCcEEEc
Confidence 35679999999999999999999999999999885 79999999888653 33334432 36789999
Q ss_pred cCCC-CHHHHHH----HHHcCC-CEEEE
Q 015899 353 SGLF-TPDDIAY----VQEAGV-KAVLV 374 (398)
Q Consensus 353 SGI~-t~eD~~~----l~~~Ga-daVLV 374 (398)
-|.. |++++.. ++..|. +-+|+
T Consensus 220 ~G~~~tl~ei~~Ave~i~~~GN~~viLc 247 (350)
T 1vr6_A 220 RGFMNTIEEFLLSAEYIANSGNTKIILC 247 (350)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCeEEEE
Confidence 9997 9998765 445687 55554
No 292
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=94.33 E-value=0.087 Score=52.32 Aligned_cols=77 Identities=18% Similarity=0.064 Sum_probs=60.7
Q ss_pred HHHHHHHHHHcCCcEEEEecc--CCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCChH
Q 015899 199 PVEIARSYEKGGAACLSILTD--EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPDL 275 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVLTd--~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~~ 275 (398)
..++|+.+++.|++.|+|-.- ........+.+..||+. +++||+.-..| ++.+..++...| ||.|.+.-.++.+.
T Consensus 253 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~-~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~~P 330 (364)
T 1vyr_A 253 ALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRER-FHGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIANP 330 (364)
T ss_dssp HHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred HHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHH-CCCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHHhCh
Confidence 556899999999999999641 11122356778899997 89999987766 899999999998 99999988877655
Q ss_pred HH
Q 015899 276 DI 277 (398)
Q Consensus 276 ~L 277 (398)
++
T Consensus 331 ~~ 332 (364)
T 1vyr_A 331 DL 332 (364)
T ss_dssp TH
T ss_pred hH
Confidence 54
No 293
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=94.32 E-value=0.15 Score=47.84 Aligned_cols=61 Identities=20% Similarity=0.280 Sum_probs=48.6
Q ss_pred cChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 325 VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 325 vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
.+++...++++. ..+++-..|||.+.+|++++.++|++-|+||++.++.++....+.+.++
T Consensus 62 ~~~~~i~~i~~~--------~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g 122 (243)
T 4gj1_A 62 RQFALIEKLAKE--------VSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFG 122 (243)
T ss_dssp CCHHHHHHHHHH--------CCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHh--------cCCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCchHHHHHhccc
Confidence 345555666654 3568888999999999999999999999999999998887655555554
No 294
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=94.31 E-value=0.2 Score=47.77 Aligned_cols=151 Identities=13% Similarity=0.127 Sum_probs=90.2
Q ss_pred HHHHHHHHhcCC--CCcEEeccc----------cCCHHHHHHHHHcCcCEEEEecc----CC--ChHHHHHHHHHHHHcC
Q 015899 227 FENLEAVRSAGV--KCPLLCKEF----------IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLG 288 (398)
Q Consensus 227 ~edL~~Ir~a~v--~lPVL~KDF----------Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LG 288 (398)
+-+|..+++. + ++.|-..|. =+++.++ +.+||+.|+|+.+ .+ +++.+..=++.|.+.|
T Consensus 45 ~~~L~~v~~~-~~~~i~vgAQn~~~~~~GA~TGEiS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~G 120 (249)
T 3th6_A 45 APYLDYCRSL-LPPSVALAAQNCYKVEQGAFTGEISPGMI---KDCGGQWVILGHSERRHVFKEDDVLIGEKIKHALESG 120 (249)
T ss_dssp GGGHHHHHHH-SCTTEEEEESCCCSSSSBSCTTCCCHHHH---HHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHH-hccCCEEEeeecCCccCCCcccccCHHHH---HHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCC
Confidence 3378877765 3 344444441 1555554 5579999999998 33 4555666678899999
Q ss_pred CcEEEEcCC-HHH-------------HHHHhcc-C--CCcEEeeccc-cC-cccccChhhHHHHhhhhccc---cc---c
Q 015899 289 LTALVEVHD-ERE-------------MDRVLGI-E--GIELIGINNR-NL-ETFEVDNSNTKKLLEGERGE---II---R 343 (398)
Q Consensus 289 L~~LVEVht-~eE-------------l~rAl~l-~--Ga~iIGINnR-dL-~tf~vDl~~t~~L~~~i~~~---~i---~ 343 (398)
|.++++|.. ++| ++.++.. . ...+|..-.- -. +.-..+.+...+....+|.- .+ .
T Consensus 121 L~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~vIAYEPvWAIGTG~~At~e~aqevh~~IR~~l~~~~~~~~ 200 (249)
T 3th6_A 121 LNVIACIGELLEDREAGRTEEVCFRQIKHIASNVKDWSKVVIAYEPVWAIGTGKTATPDQAQEVHSKVRNWLSTNVSADV 200 (249)
T ss_dssp CEEEEEECCCHHHHTTTCHHHHHHHHHHHHHTTCSCGGGEEEEECCTTTCCC---CCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred CEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhchhhhcCEEEEECCcchhcCCCCCCHHHHHHHHHHHHHHHHHhhChhh
Confidence 999999974 332 3333321 0 0112222100 00 01122344444443333320 01 0
Q ss_pred cCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 344 QKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 344 ~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
...+.++..|+++.-++...+...++||+|||.+=.++
T Consensus 201 a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~~ 238 (249)
T 3th6_A 201 ASKVRIQYGGSVNAGNCKELGRKPDIDGFLVGGASLKP 238 (249)
T ss_dssp HHHCCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGST
T ss_pred cccccEEEcCccCHhHHHHHhcCCCCCEEEeehHhhhH
Confidence 12478999999988888888888999999999998886
No 295
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=94.25 E-value=3.6 Score=39.58 Aligned_cols=166 Identities=14% Similarity=0.083 Sum_probs=98.9
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHH-HHHH---HHhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFE-NLEA---VRSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~e-dL~~---Ir~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++++.+.+.|+++|-|+ |--+++.=+.+ ..+. +++. .-.+||+..=.-.+.. ....|..+|||+|+++.
T Consensus 38 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 117 (307)
T 3s5o_A 38 EENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVT 117 (307)
T ss_dssp HHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 345666778999999987 21222222333 3232 2332 2368998643323333 23466789999999987
Q ss_pred cCC-----ChHH-HHHHHHHHHHcCCcEEEEc--------CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhh
Q 015899 270 AVL-----PDLD-IRYMTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLE 335 (398)
Q Consensus 270 aiL-----~~~~-L~~Li~~a~~LGL~~LVEV--------ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~ 335 (398)
-.. +++. ++++-..|...++.+++=- =+.+.+.+..+. ..++||-.. .-|+....+++.
T Consensus 118 P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiKds-----sgd~~~~~~~~~ 190 (307)
T 3s5o_A 118 PCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQH--PNIVGMXDS-----GGDVTRIGLIVH 190 (307)
T ss_dssp CCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTS--TTEEEEEEC-----SCCHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhcC--CCEEEEEcC-----CCCHHHHHHHHH
Confidence 653 4444 5555566677788775421 145666665554 579999732 346777777765
Q ss_pred hhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 336 GERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 336 ~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
.. .+.+..+. +|-.+ .+.....+|++|++-|.+=+-+
T Consensus 191 ~~-----~~~~f~v~--~G~d~--~~l~~l~~G~~G~is~~an~~P 227 (307)
T 3s5o_A 191 KT-----RKQDFQVL--AGSAG--FLMASYALGAVGGVCALANVLG 227 (307)
T ss_dssp HT-----TTSSCEEE--ESSGG--GHHHHHHHTCCEEECGGGGTCH
T ss_pred hc-----cCCCeEEE--eCcHH--HHHHHHHcCCCEEEechhhhhH
Confidence 42 12344443 44432 3556677999999988775543
No 296
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=94.23 E-value=0.32 Score=46.53 Aligned_cols=160 Identities=15% Similarity=0.162 Sum_probs=90.1
Q ss_pred cEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE----eccccCC-HHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHH
Q 015899 212 ACLSILTDEKYFKGSFENLEAVRSAGVKCPLL----CKEFIVD-AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKL 286 (398)
Q Consensus 212 ~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL----~KDFIid-~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~ 286 (398)
.++=|-++ -|...+++-++.+++. +.+|+ .-|..-+ ..++..+..+|||+|.+.+ ....+.++.+++.++.
T Consensus 32 ~~~KvG~~-l~~~~G~~~v~~Lk~~--g~~VflDlK~~DIpnTv~~a~~~~~~~gad~vTVh~-~~G~~~~~aa~~~~~~ 107 (259)
T 3tfx_A 32 VFVKVGME-LFYNAGIDVIKKLTQQ--GYKIFLDLKMHDIPNTVYNGAKALAKLGITFTTVHA-LGGSQMIKSAKDGLIA 107 (259)
T ss_dssp CEEEECHH-HHHHHCHHHHHHHHHT--TCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEG-GGCHHHHHHHHHHHHH
T ss_pred eEEEeCHH-HHHhcCHHHHHHHHHC--CCcEEEEecccccchHHHHHHHHHHhcCCCEEEEcC-CCCHHHHHHHHHHHHH
Confidence 34444332 2334467788888874 77887 2453211 2455566778999999854 4556668888887764
Q ss_pred c---C-----CcEEEEcCCH--HHHHH------------------HhccCCCcEEeeccccCcccccChhhHHHHhhhhc
Q 015899 287 L---G-----LTALVEVHDE--REMDR------------------VLGIEGIELIGINNRNLETFEVDNSNTKKLLEGER 338 (398)
Q Consensus 287 L---G-----L~~LVEVht~--eEl~r------------------Al~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~ 338 (398)
. | +-.+.+..+. +++.. +.++ |.+ |+ -........+.+.+
T Consensus 108 ~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~-G~d--Gv--------V~s~~e~~~ir~~~- 175 (259)
T 3tfx_A 108 GTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHS-GAD--GV--------ICSPLEVKKLHENI- 175 (259)
T ss_dssp HSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHT-TCC--EE--------ECCGGGHHHHHHHH-
T ss_pred hcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHh-CCC--EE--------EECHHHHHHHHhhc-
Confidence 2 3 2223344433 33311 1111 222 11 11122233332221
Q ss_pred ccccccCCceEEEecCCCCH----HH------HHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 339 GEIIRQKNIIVVGESGLFTP----DD------IAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 339 ~~~i~~~~v~vVAESGI~t~----eD------~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
+.+. ++.-.||.-. .| +..+.++|+|-++||++|++++||.++++++..
T Consensus 176 -----~~~f-~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~ 234 (259)
T 3tfx_A 176 -----GDDF-LYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASDPKAAYEAIKK 234 (259)
T ss_dssp -----CSSS-EEEECCCCCC-----------CHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred -----CCcc-EEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHH
Confidence 2233 3334666422 22 667789999999999999999999999988754
No 297
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=94.18 E-value=0.055 Score=51.24 Aligned_cols=68 Identities=15% Similarity=0.133 Sum_probs=54.1
Q ss_pred CCcEEEEeccCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChH-HHHHHH
Q 015899 210 GAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL-DIRYMT 281 (398)
Q Consensus 210 GA~aISVLTd~~~F~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~-~L~~Li 281 (398)
|-.-|-+-. .+-+ |+.+.++.+|+. + ++||+....|.++.|+.++.. |||+|....++..+. .+.+++
T Consensus 159 g~~~vY~e~-sG~~-g~~~~v~~ir~~-~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~~~~~~e~v 228 (235)
T 3w01_A 159 RLPVMYIEY-SGIY-GDVSKVQAVSEH-LTETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKDIKKALKTV 228 (235)
T ss_dssp CCSEEEEEC-TTSC-CCHHHHHHHHTT-CSSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHCHHHHHHTT
T ss_pred CCCEEEEec-CCCc-CCHHHHHHHHHh-cCCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecCHHHHHHHH
Confidence 566666655 5554 799999999986 7 899999999999999998887 999999998887543 344444
No 298
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=94.18 E-value=0.17 Score=49.44 Aligned_cols=93 Identities=11% Similarity=0.217 Sum_probs=76.0
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-H
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-L 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~ 275 (398)
+..++++.+++.|...| |+.+-..+++.+..+++. +++||...+-+.++.++.++...| +|.|.+....... .
T Consensus 204 ~a~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~ 278 (359)
T 1mdl_A 204 AAIKRSQALQQEGVTWI----EEPTLQHDYEGHQRIQSK-LNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVT 278 (359)
T ss_dssp HHHHHHHHHHHHTCSCE----ECCSCTTCHHHHHHHHHT-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHH
T ss_pred HHHHHHHHHHHhCCCeE----ECCCChhhHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHH
Confidence 45677888888888765 455556789999999986 899999999999999999887665 8999998887754 4
Q ss_pred HHHHHHHHHHHcCCcEEEEc
Q 015899 276 DIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEV 295 (398)
+..++.+.|+..|+.+++-+
T Consensus 279 ~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 279 GWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp HHHHHHHHHHHTTCCBCCBS
T ss_pred HHHHHHHHHHHcCCeEeecc
Confidence 57888899999999977654
No 299
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=94.17 E-value=0.38 Score=47.09 Aligned_cols=162 Identities=16% Similarity=0.201 Sum_probs=90.5
Q ss_pred CcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE--ec--cccCCHH-HHHHHHHcCcCEEEEeccCCChHHHHHHHHHHH
Q 015899 211 AACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--CK--EFIVDAW-QIYYARTKGADAVLLIAAVLPDLDIRYMTKICK 285 (398)
Q Consensus 211 A~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL--~K--DFIid~~-QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~ 285 (398)
+.++=|-+ +-|...+++-++.+++. .+.+|+ .| |..-+.. .+..+..+|||.|.+-+ ..+.+.++.+++.++
T Consensus 50 v~~vKVG~-~lf~~~G~~~V~~Lk~~-~g~~IflDlKl~DIpnTv~~av~~~a~lGaD~vTVHa-~~G~~~m~aa~e~a~ 126 (303)
T 3ru6_A 50 DIWLKVGL-RAYLRDGFKFIEELKKV-DDFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHA-SAGKIAIQEVMTRLS 126 (303)
T ss_dssp SCEEEECH-HHHHHHTHHHHHHHHHH-CCCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEG-GGCHHHHHHHHHHHT
T ss_pred ccEEEeCH-HHHHHhCHHHHHHHHHh-hCCCEEEEeeeccCchhHHHHHHHHHhcCCCEEEEec-cCCHHHHHHHHHHHH
Confidence 55666643 33344567778888875 367776 23 4221122 34455678999999854 445666888888876
Q ss_pred HcCC--cEE-E-Ec-C-CHHHHH----------------HHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccc
Q 015899 286 LLGL--TAL-V-EV-H-DEREMD----------------RVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIR 343 (398)
Q Consensus 286 ~LGL--~~L-V-EV-h-t~eEl~----------------rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~ 343 (398)
+.|- ..+ | .. + +.+++. .+.+. |.+-+-.. ..+ ...+.+. .
T Consensus 127 ~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~-G~dGvV~s-------~~E---~~~IR~~-----~- 189 (303)
T 3ru6_A 127 KFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYEN-GLDGMVCS-------VFE---SKKIKEH-----T- 189 (303)
T ss_dssp TSSSCCEEEEECSCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHT-TCSEEECC-------TTT---HHHHHHH-----S-
T ss_pred hcCCCceEEEEEEecCCCHHHHHHHHcCCHHHHHHHHHHHHHHc-CCCEEEEC-------HHH---HHHHHHh-----C-
Confidence 6542 111 2 11 1 223321 12222 43321111 111 2233322 1
Q ss_pred cCCceEEEecCCCCH----------HHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 344 QKNIIVVGESGLFTP----------DDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 344 ~~~v~vVAESGI~t~----------eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
+.+ .++.-.||.-. ..+..+.++|+|.++||++|++++||.+++++|..
T Consensus 190 ~~~-fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a~dp~~a~~~i~~ 248 (303)
T 3ru6_A 190 SSN-FLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILN 248 (303)
T ss_dssp CTT-SEEEECCCCTTC--------CCSHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHH
T ss_pred CCc-cEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHH
Confidence 223 34446677511 03556678999999999999999999999888753
No 300
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=94.16 E-value=0.1 Score=52.53 Aligned_cols=72 Identities=18% Similarity=0.162 Sum_probs=55.8
Q ss_pred HHHHHHHHHcCCcEEEEecc--CCcCC--CCHHHHHHHHhcCC--CCcEEeccccCCHHHHHHHHHcCcCEEEEeccCC
Q 015899 200 VEIARSYEKGGAACLSILTD--EKYFK--GSFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd--~~~F~--Gs~edL~~Ir~a~v--~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (398)
.+.|+.+++.||++|.|-.- ..... ..++-|..++++ + ++||+.-..|.++.++.+|.++|||+|.+....+
T Consensus 263 ~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~a-v~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l 340 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEA-VEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIV 340 (392)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHH-HTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHH-cCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHH
Confidence 46799999999999999311 11111 245667777765 5 5999999999999999999999999999987554
No 301
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=94.16 E-value=0.16 Score=47.34 Aligned_cols=173 Identities=7% Similarity=0.090 Sum_probs=100.6
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCC-cEEe----ccccCCHHHHHHHHHcCc--CEEEEecc
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKC-PLLC----KEFIVDAWQIYYARTKGA--DAVLLIAA 270 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~l-PVL~----KDFIid~~QI~eAr~~GA--DaVLLiaa 270 (398)
...+++..... .+.++=|-++ -|...+++-++.+++. .+. ||+. -| | |..+..+...-+ |+|.+.+
T Consensus 14 ~al~l~~~l~~-~v~~~KvG~~-l~~~~G~~~v~~L~~~-~~~~~VflDlK~~D--I-~nTv~~~~~~~~~~d~vTVh~- 86 (222)
T 4dbe_A 14 LSYQVLKEMEN-ELYGIKVGLP-LVLDLGVDKTRELLIG-LDVEEIIVDFKLAD--I-GYIMKSIVERLSFANSFIAHS- 86 (222)
T ss_dssp CCHHHHHHHGG-GCSEEEEEHH-HHHHHCHHHHHHHHHT-CCCSEEEEEEEECS--C-HHHHHHHHTTCTTCSEEEEES-
T ss_pred HHHHHHHHhCC-cCcEEEECHH-HHHhhCHHHHHHHHHh-cCCCeEEEEeeecc--h-HHHHHHHHHHHHhCCEEEEEc-
Confidence 44566665533 3666766553 2444567888888873 367 8872 34 2 233433332222 7777743
Q ss_pred CCC-hHHHHHHHHHHHHc--CCcEEEEcCCH--------HHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcc
Q 015899 271 VLP-DLDIRYMTKICKLL--GLTALVEVHDE--------REMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERG 339 (398)
Q Consensus 271 iL~-~~~L~~Li~~a~~L--GL~~LVEVht~--------eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~ 339 (398)
... .+.++.+++.++.. |+.+|...++. .-+..+.++ |.+-+-+.. ...+....+.+.
T Consensus 87 ~~G~~~~~~~a~~~~~~~~~~v~vLts~s~~~~~~~~~~~~a~~a~~~-g~~GvV~sa-------t~p~e~~~ir~~--- 155 (222)
T 4dbe_A 87 FIGVKGSLDELKRYLDANSKNLYLVAVMSHEGWSTLFADYIKNVIREI-SPKGIVVGG-------TKLDHITQYRRD--- 155 (222)
T ss_dssp TTCTTTTHHHHHHHHHHTTCEEEEEEECSSTTCCCTTHHHHHHHHHHH-CCSEEEECT-------TCHHHHHHHHHH---
T ss_pred CcCcHHHHHHHHHHHHhcCCcEEEEEeCCCcchHHHHHHHHHHHHHHh-CCCEEEECC-------CCHHHHHHHHHh---
Confidence 445 55799999888765 55556677663 334444554 655221111 112223333332
Q ss_pred cccccCCceEEEecCCCCHH-HHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 340 EIIRQKNIIVVGESGLFTPD-DIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 340 ~~i~~~~v~vVAESGI~t~e-D~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
. + + .++.-.||.-.. +...+.++|+|.++||.+|++++||.++.+++..
T Consensus 156 --~-~-~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~i~~ 205 (222)
T 4dbe_A 156 --F-E-K-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINK 205 (222)
T ss_dssp --C-T-T-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred --C-C-C-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcCCCCHHHHHHHHHH
Confidence 1 2 3 444456664210 4555567999999999999999999999887753
No 302
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=94.15 E-value=4.1 Score=38.87 Aligned_cols=165 Identities=12% Similarity=0.099 Sum_probs=100.0
Q ss_pred HHHHHHHHcCCcEEEEe-ccCCcCCCCHHHH-HHH---Hhc-CCCCcEEeccccCCHHH----HHHHHHcCcCEEEEecc
Q 015899 201 EIARSYEKGGAACLSIL-TDEKYFKGSFENL-EAV---RSA-GVKCPLLCKEFIVDAWQ----IYYARTKGADAVLLIAA 270 (398)
Q Consensus 201 ~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL-~~I---r~a-~v~lPVL~KDFIid~~Q----I~eAr~~GADaVLLiaa 270 (398)
++.+.+.++|+++|-++ |--+|+.=+.+.- +.+ .+. .-.+||+..=.-.+..+ ...|..+|||+|+++.-
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 106 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITP 106 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCC
Confidence 45667889999999987 2222222233332 222 222 23689997544344432 34567789999999876
Q ss_pred CC---ChHH-HHHHHHHHHHcCCcEEEEc--------CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhc
Q 015899 271 VL---PDLD-IRYMTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGER 338 (398)
Q Consensus 271 iL---~~~~-L~~Li~~a~~LGL~~LVEV--------ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~ 338 (398)
.. +++. .+++-..|...++.+++=- =+.+.+.+..+. ..++||-.. .-|+....+++...
T Consensus 107 ~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgiK~s-----sgd~~~~~~~~~~~- 178 (292)
T 3daq_A 107 YYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQH--PYIVALKDA-----TNDFEYLEEVKKRI- 178 (292)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTS--TTEEEEEEC-----CCCHHHHHHHHTTS-
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcC--CCEEEEEeC-----CCCHHHHHHHHHHC-
Confidence 53 4444 4455556666788876531 145666666664 479999732 33677777877652
Q ss_pred ccccccC-CceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 339 GEIIRQK-NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 339 ~~~i~~~-~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
+. +..+.+ |-. +.+.....+|++|++-|.+=+-++
T Consensus 179 -----~~~~f~v~~--G~d--~~~~~~l~~G~~G~is~~~n~~P~ 214 (292)
T 3daq_A 179 -----DTNSFALYS--GND--DNVVEYYQRGGQGVISVIANVIPK 214 (292)
T ss_dssp -----CTTTSEEEE--SCG--GGHHHHHHTTCCEEEESGGGTCHH
T ss_pred -----CCCCEEEEE--CCH--HHHHHHHhcCCCEEEeCHHHhhHH
Confidence 23 444443 332 235566789999999888755443
No 303
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=94.14 E-value=0.19 Score=49.65 Aligned_cols=93 Identities=15% Similarity=0.233 Sum_probs=75.4
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DL 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~ 275 (398)
+..++++.+++.|...| |+.+-..+++.+..+|+. +++||...+-+.++.++.++...| +|.|.+...... -.
T Consensus 205 ~a~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit 279 (384)
T 2pgw_A 205 DAINMCRKLEKYDIEFI----EQPTVSWSIPAMAHVREK-VGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQ 279 (384)
T ss_dssp HHHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-CSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHH
T ss_pred HHHHHHHHHHhcCCCEE----eCCCChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHH
Confidence 45567888888887765 344555689999999987 899999999999999999988765 899999777664 35
Q ss_pred HHHHHHHHHHHcCCcEEEEc
Q 015899 276 DIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEV 295 (398)
+..++.+.|+..|+.+++-+
T Consensus 280 ~~~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 280 PMMKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp HHHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHCCCeEeecc
Confidence 57788899999999988765
No 304
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=94.11 E-value=4.5 Score=39.48 Aligned_cols=166 Identities=12% Similarity=0.021 Sum_probs=99.2
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHH-HHHHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFE-NLEAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~e-dL~~I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++++.+.+.|+++|-|+ |--+++.=+.+ ..+.+ ++. .-.+||+..=.-.+.. +...|..+|||+|++..
T Consensus 58 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 58 SALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAP 137 (332)
T ss_dssp HHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 456677788999999987 22222222333 32222 322 2369999654333333 34456788999999988
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEE-------c-CCHHHHHHHhccCCCcEEeeccccCcccccC----hhhHHHH
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVE-------V-HDEREMDRVLGIEGIELIGINNRNLETFEVD----NSNTKKL 333 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVE-------V-ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vD----l~~t~~L 333 (398)
-.. +++. ++++-..|...++.+++= + =+.+.+.+..+. ..++||-.. .-| +....++
T Consensus 138 P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~--pnIvgiKds-----sgd~~~~~~~~~~l 210 (332)
T 2r8w_A 138 VSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAYI--PNIRAIKMP-----LPADADYAGELARL 210 (332)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHTS--TTEEEEEEC-----CCTTCCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcC--CCEEEEEeC-----CCCchhHHHHHHHH
Confidence 754 4555 445556677778887652 1 145666665554 579999732 235 6677777
Q ss_pred hhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 334 LEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 334 ~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
+... +.+..+.+ |- -+.+.....+|++|++-|.+=+-++
T Consensus 211 ~~~~------~~~f~v~~--G~--D~~~l~~l~~G~~G~is~~anv~P~ 249 (332)
T 2r8w_A 211 RPKL------SDDFAIGY--SG--DWGCTDATLAGGDTWYSVVAGLLPV 249 (332)
T ss_dssp TTTS------CTTCEEEE--CC--HHHHHHHHHTTCSEEEESGGGTCHH
T ss_pred HHhc------CCCEEEEe--Cc--hHHHHHHHHCCCCEEEeCHHHhCHH
Confidence 6541 23444432 32 2345566778999999997765433
No 305
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=94.08 E-value=0.14 Score=50.86 Aligned_cols=71 Identities=24% Similarity=0.288 Sum_probs=56.0
Q ss_pred HHHHHHHHcCCcEEEEecc--C--CcCCCCHHHHHHHHhcCC--CCcEEeccccCCHHHHHHHHHcCcCEEEEeccCC
Q 015899 201 EIARSYEKGGAACLSILTD--E--KYFKGSFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 201 ~iA~aY~~~GA~aISVLTd--~--~~F~Gs~edL~~Ir~a~v--~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (398)
+.|+.+.+.||++|.|-.- . .+....++.|..+++. + ++||+.-..|.++.++.++.++|||+|.+...++
T Consensus 237 e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~-~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l 313 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKA-AQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVV 313 (370)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHH-TTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHH-hCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHH
Confidence 6788889999999999321 1 1112345667778776 6 7999999999999999999999999999987655
No 306
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=94.08 E-value=0.065 Score=52.26 Aligned_cols=94 Identities=22% Similarity=0.252 Sum_probs=68.5
Q ss_pred CccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEec-cCCcCCC---CHHHHHHHHh
Q 015899 160 ARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT-DEKYFKG---SFENLEAVRS 235 (398)
Q Consensus 160 ~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLT-d~~~F~G---s~edL~~Ir~ 235 (398)
+..+.+.++.. ...|+..+ ...+.|+.+.+.||++|-+-. +.+...| +++.+..+++
T Consensus 113 p~~~~~~l~~~-----g~~v~~~v--------------~s~~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~ 173 (326)
T 3bo9_A 113 PTKYIRELKEN-----GTKVIPVV--------------ASDSLARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSR 173 (326)
T ss_dssp CHHHHHHHHHT-----TCEEEEEE--------------SSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHH
T ss_pred cHHHHHHHHHc-----CCcEEEEc--------------CCHHHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHH
Confidence 35677777653 34666644 123567788889999988743 2222222 4567777777
Q ss_pred cCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCC
Q 015899 236 AGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 236 a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (398)
. +++||+.-..|.++..+.++..+|||+|.+..+++.
T Consensus 174 ~-~~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~ 210 (326)
T 3bo9_A 174 S-VNIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVA 210 (326)
T ss_dssp H-CSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred H-cCCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHc
Confidence 6 799999999989999999999999999999988763
No 307
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=94.05 E-value=0.089 Score=53.44 Aligned_cols=49 Identities=14% Similarity=0.182 Sum_probs=42.9
Q ss_pred CceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhcCc
Q 015899 346 NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFGKD 395 (398)
Q Consensus 346 ~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~~~ 395 (398)
++++|+-|||.|++++.++.+. ||.|.+|.+++..||....+++=...+
T Consensus 318 ~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~IanPdlv~ki~~G~~~~ 366 (419)
T 3l5a_A 318 RIPLIASGGINSPESALDALQH-ADMVGMSSPFVTEPDFVHKLAEQRPHD 366 (419)
T ss_dssp SSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHHCTTHHHHHHTTCGGG
T ss_pred CCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHHCcHHHHHHHcCCccc
Confidence 5789999999999999999999 999999999999999888776644333
No 308
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=94.01 E-value=0.26 Score=48.55 Aligned_cols=90 Identities=16% Similarity=0.138 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-H
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-L 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~ 275 (398)
+..++++.+++.|. .| -+| + . +++.++.+|+. +++||...+-+.++.+..++...| +|.|.+....... .
T Consensus 204 ~a~~~~~~l~~~~i-~i---E~P-~-~-~~~~~~~l~~~-~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit 275 (379)
T 2rdx_A 204 NAIRLARATRDLDY-IL---EQP-C-R-SYEECQQVRRV-ADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLS 275 (379)
T ss_dssp HHHHHHHHTTTSCC-EE---ECC-S-S-SHHHHHHHHTT-CCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHH
T ss_pred HHHHHHHHHHhCCe-EE---eCC-c-C-CHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHH
Confidence 34566777777775 43 344 3 3 99999999986 899999999999999999887665 8999998887754 5
Q ss_pred HHHHHHHHHHHcCCcEEEEc
Q 015899 276 DIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEV 295 (398)
+..++.+.|+..|+.+++-+
T Consensus 276 ~~~~i~~~A~~~g~~~~~~~ 295 (379)
T 2rdx_A 276 KARRTRDFLIDNRMPVVAED 295 (379)
T ss_dssp HHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHcCCeEEEee
Confidence 67888999999999998874
No 309
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=93.99 E-value=2 Score=41.20 Aligned_cols=169 Identities=15% Similarity=0.124 Sum_probs=95.0
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhc--CCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a--~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~ 275 (398)
+|.. ++.....||++|-+ +.++ .-.+.+.+....++ ....|++.+=.-.++.+|..+..+|+|.|++ -.+-+.+
T Consensus 49 ~p~~-~e~a~~~GaD~v~l-DlEh-~~~~~~~~~~~l~a~~~~~~~~~VRv~~~d~~di~~~ld~ga~~Iml-P~V~sae 124 (287)
T 2v5j_A 49 SSYS-AELLAGAGFDWLLI-DGEH-APNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGTQTLLV-PMVQNAD 124 (287)
T ss_dssp CHHH-HHHHHTSCCSEEEE-ESSS-SSCCHHHHHHHHHHHTTSSSEEEEECSSSCHHHHHHHHHTTCCEEEE-SCCCSHH
T ss_pred CHHH-HHHHHhCCCCEEEE-eCCC-ccchHHHHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHhCCCCEEEe-CCCCCHH
Confidence 4544 44556789998755 3333 24556655554322 1245555433335788999999999998877 5666777
Q ss_pred HHHHHHHHHHH-------------------------------cCCcEEEEcCC-HHHHHHHhccCCCcEEeeccccCcc-
Q 015899 276 DIRYMTKICKL-------------------------------LGLTALVEVHD-EREMDRVLGIEGIELIGINNRNLET- 322 (398)
Q Consensus 276 ~L~~Li~~a~~-------------------------------LGL~~LVEVht-~eEl~rAl~l~Ga~iIGINnRdL~t- 322 (398)
+++.+++.++. ..+-+++|+.. .+.++..+..++.+.|-|..-||..
T Consensus 125 ea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~n~deIaa~~~vD~l~iG~~DLs~~ 204 (287)
T 2v5j_A 125 EAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFIGPADLSAD 204 (287)
T ss_dssp HHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHHH
T ss_pred HHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHHHHHHHhCcCCCCEEEECHHHHHHH
Confidence 88888876531 22445666541 1222222333456655555444421
Q ss_pred cc----cC---hhhH-HHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccc
Q 015899 323 FE----VD---NSNT-KKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 377 (398)
Q Consensus 323 f~----vD---l~~t-~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 377 (398)
+. .+ +... .+++...+. .++.+..- ..+++.+..+...|++.+.+|..
T Consensus 205 lg~~~~~~~p~v~~a~~~iv~aara-----aG~~~gv~--~~d~~~a~~~~~~G~~~~s~~~d 260 (287)
T 2v5j_A 205 MGYAGNPQHPEVQAAIEQAIVQIRE-----SGKAPGIL--IANEQLAKRYLELGALFVAVGVD 260 (287)
T ss_dssp TTSTTCCCSHHHHHHHHHHHHHHHH-----TTSEEEEE--CCCHHHHHHHHHTTCSEEEEEEH
T ss_pred hCCCCCCCCHHHHHHHHHHHHHHHH-----cCCeeEEe--cCCHHHHHHHHHhCCCEEEECcH
Confidence 11 11 1111 223332222 23333222 24899999999999999999964
No 310
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=93.98 E-value=4.5 Score=38.70 Aligned_cols=166 Identities=13% Similarity=0.125 Sum_probs=100.7
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHHHHHHH----Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFENLEAV----RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL~~I----r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++++.+.+.|+++|-++ |--+++.=+.+.-.++ .+. .-.+||+..=.-.+.. ....|..+|||+|+++.
T Consensus 31 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 31 RDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 345667789999999986 2222222244333322 222 2368999754433443 34466789999999987
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEEc--------CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGE 337 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVEV--------ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i 337 (398)
-.. +++. .+++-..|...++.+++=- =+.+.+.+..+. ..++||-.. .-|+....+++...
T Consensus 111 P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgiKds-----sgd~~~~~~~~~~~ 183 (297)
T 3flu_A 111 PYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEI--PNIVGVKEA-----SGNIGSNIELINRA 183 (297)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTS--TTEEEEEEC-----SCCHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHcC--CCEEEEEeC-----CCCHHHHHHHHHhc
Confidence 653 4444 4555566667788876531 145666665553 579999732 34777777777642
Q ss_pred cccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 338 RGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 338 ~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
+.+..+. +|-. +.+.....+|++|++-|.+=+-++
T Consensus 184 ------~~~f~v~--~G~d--~~~l~~l~~G~~G~is~~an~~P~ 218 (297)
T 3flu_A 184 ------PEGFVVL--SGDD--HTALPFMLCGGHGVITVAANAAPK 218 (297)
T ss_dssp ------CTTCEEE--ECCG--GGHHHHHHTTCCEEEESGGGTCHH
T ss_pred ------CCCeEEE--ECcH--HHHHHHHhCCCCEEEechHhhhHH
Confidence 2344443 3432 235566779999999888766543
No 311
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=93.86 E-value=0.15 Score=47.68 Aligned_cols=73 Identities=14% Similarity=0.130 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCCcEEEEeccCCcCCC-------CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccC
Q 015899 199 PVEIARSYEKGGAACLSILTDEKYFKG-------SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVLTd~~~F~G-------s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (398)
+.+..+.+.+.+...+-+.+-.++-+. ..+.++.+|+. +++||+....|-++.++.++..+|||+|.++.++
T Consensus 155 ~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~-~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai 233 (262)
T 1rd5_A 155 PEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKV-TNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAM 233 (262)
T ss_dssp CHHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred CHHHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhh-cCCeEEEECCcCCHHHHHHHHHcCCCEEEEChHH
Confidence 345555555555656666654332211 23467888886 7999998666556999999999999999999886
Q ss_pred C
Q 015899 272 L 272 (398)
Q Consensus 272 L 272 (398)
.
T Consensus 234 ~ 234 (262)
T 1rd5_A 234 V 234 (262)
T ss_dssp H
T ss_pred H
Confidence 5
No 312
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=93.77 E-value=0.04 Score=50.70 Aligned_cols=63 Identities=17% Similarity=0.166 Sum_probs=51.9
Q ss_pred HHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEecc
Q 015899 202 IARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (398)
Q Consensus 202 iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa 270 (398)
-.+...+...+++=+| |+ =-++.++.+++. +++||+..+||.++.++.+|..+|||+|--...
T Consensus 119 ~~~~i~~~~PD~iEiL--PG---i~p~iI~~i~~~-~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 119 GVALIQKVQPDCIELL--PG---IIPEQVQKMTQK-LHIPVIAGGLIETSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp HHHHHHHHCCSEEEEE--CT---TCHHHHHHHHHH-HCCCEEEESSCCSHHHHHHHHTTTEEEEEECCG
T ss_pred HHHHHhhcCCCEEEEC--Cc---hhHHHHHHHHHh-cCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCH
Confidence 4455666678888887 33 257889999987 899999999999999999999999999976543
No 313
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=93.77 E-value=0.56 Score=49.39 Aligned_cols=117 Identities=9% Similarity=0.136 Sum_probs=89.4
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEecc-------
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA------- 270 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa------- 270 (398)
+..+-+.+..++|++.|-|=|--.+-.+-.+.++.||+...++||+.... .+..+......+|||+|....-
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNV-aT~e~a~~Li~aGAD~vkVGiGpGSiCtT 359 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNV-VTREQAAQLIAAGADGLRIGMGSGSICIT 359 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEE-CSHHHHHHHHHHTCSEEEECSSCSTTBCC
T ss_pred cHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccc-cCHHHHHHHHHcCCCEEeecCCCCccccc
Confidence 56788999999999999886666555556777888887645899998774 7777888888999999987432
Q ss_pred -CC---ChHH---HHHHHHHHHHcCCcEEEE--cCCHHHHHHHhccCCCcEEeec
Q 015899 271 -VL---PDLD---IRYMTKICKLLGLTALVE--VHDEREMDRVLGIEGIELIGIN 316 (398)
Q Consensus 271 -iL---~~~~---L~~Li~~a~~LGL~~LVE--Vht~eEl~rAl~l~Ga~iIGIN 316 (398)
.. .-.+ +.+..+.++.+|..++.+ +++.-++-+|+.+ ||+.+.+.
T Consensus 360 r~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaa-GAd~VMlG 413 (556)
T 4af0_A 360 QEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALAL-GASAVMMG 413 (556)
T ss_dssp TTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEES
T ss_pred ccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhc-CCCEEEEc
Confidence 11 1123 444556666789999987 7899999999998 99988775
No 314
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=93.76 E-value=0.4 Score=46.27 Aligned_cols=134 Identities=13% Similarity=0.083 Sum_probs=81.0
Q ss_pred CCHHHHHHHHHcCcCEEEEeccC----C--ChHHHHHHHHHHHHcCCcEEEEcC-CHHH-------------HHHHhcc-
Q 015899 249 VDAWQIYYARTKGADAVLLIAAV----L--PDLDIRYMTKICKLLGLTALVEVH-DERE-------------MDRVLGI- 307 (398)
Q Consensus 249 id~~QI~eAr~~GADaVLLiaai----L--~~~~L~~Li~~a~~LGL~~LVEVh-t~eE-------------l~rAl~l- 307 (398)
|++.++ +.+||+.|+|+.+= + +++.+..=++.|.+.||.++++|- +++| ++.++.-
T Consensus 101 IS~~mL---kd~G~~~ViiGHSERR~~f~Etde~v~~Kv~~Al~~GL~pIlCVGEtleere~g~t~~vv~~Ql~~~l~~v 177 (271)
T 3krs_A 101 VSCEML---KDMDVDCSLVGHSERRQYYSETDQIVNNKVKKGLENGLKIVLCIGESLSERETGKTNDVIQKQLTEALKDV 177 (271)
T ss_dssp CCHHHH---HHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTC
T ss_pred ccHHHH---HHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHCCCHHHHHHHHHHHHHhch
Confidence 555554 55799999999983 3 455677778889999999999996 4543 2333320
Q ss_pred C--CCcEEeeccc-cC-cccccChhhHHHHhhhhccc---cc---ccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccc
Q 015899 308 E--GIELIGINNR-NL-ETFEVDNSNTKKLLEGERGE---II---RQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 377 (398)
Q Consensus 308 ~--Ga~iIGINnR-dL-~tf~vDl~~t~~L~~~i~~~---~i---~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 377 (398)
. ...+|..-.. -. +.-.-+.+...+....+|.- .+ ....+.++..|+++.-+....+...++||+|||.+
T Consensus 178 ~~~~~~vIAYEPvWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~~~~diDG~LVGgA 257 (271)
T 3krs_A 178 SDLSNLVIAYEPIWAIGTGVVATPGQAQEAHAFIREYVTRMYNPQVSSNLRIIYGGSVTPDNCNELIKCADIDGFLVGGA 257 (271)
T ss_dssp CCCTTEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHCCEEECSCCCTTTHHHHHHSTTCCEEEESGG
T ss_pred HhhcCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHhcCCCCCEEEeeHH
Confidence 0 1113322110 00 00112344444433332221 00 01246899999998777777888899999999999
Q ss_pred ccCCCChHH
Q 015899 378 IVKQDDPGK 386 (398)
Q Consensus 378 Lmk~~dp~~ 386 (398)
-++ ++-.+
T Consensus 258 SL~-~~F~~ 265 (271)
T 3krs_A 258 SLK-PTFAK 265 (271)
T ss_dssp GGS-TTHHH
T ss_pred hhh-HHHHH
Confidence 999 45333
No 315
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=93.76 E-value=0.27 Score=48.31 Aligned_cols=101 Identities=8% Similarity=0.017 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DL 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~ 275 (398)
+..++++.+++.|...| |+.+-..+++.+..+++. +++||...+-+.++.++.++...| +|.|.+...... -.
T Consensus 206 ~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~ 280 (371)
T 2ovl_A 206 GAIRAARALAPFDLHWI----EEPTIPDDLVGNARIVRE-SGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYT 280 (371)
T ss_dssp HHHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-HCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHH
T ss_pred HHHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHhh-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHH
Confidence 45577888888888765 455556789999999987 899999999999999999887665 899999877774 45
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCHHHHHHHh
Q 015899 276 DIRYMTKICKLLGLTALVEVHDEREMDRVL 305 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEVht~eEl~rAl 305 (398)
+..++.+.|+..|+.+++ |+..|+-..+
T Consensus 281 ~~~~i~~~A~~~gi~~~~--h~~~~a~~hl 308 (371)
T 2ovl_A 281 TFRKVAALAEANNMLLTS--HGVHDLTVHA 308 (371)
T ss_dssp HHHHHHHHHHHTTCCEEE--CSCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEcc--ccHHHHHHHH
Confidence 578889999999999887 5544443333
No 316
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=93.69 E-value=4.9 Score=38.92 Aligned_cols=166 Identities=12% Similarity=0.079 Sum_probs=98.4
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHHHHHH-H---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFENLEA-V---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL~~-I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++.+.+.+.|+++|-++ |--+++.=+.+.-.. + ++. .-.+||+..=.-.+.. +...|..+|||+|+++.
T Consensus 48 ~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 48 GRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 345667788999999887 222222223433322 2 222 2369999754333333 24456789999999987
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEEc--------CCHHHHHHH-hccCCCcEEeeccccCcccccChhhHHHHhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVEV--------HDEREMDRV-LGIEGIELIGINNRNLETFEVDNSNTKKLLEG 336 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVEV--------ht~eEl~rA-l~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~ 336 (398)
-.. +++. ++++-..|...++.+++=- =+.+.+.+. .+. ..++||-.. .-|+....+++..
T Consensus 128 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~--pnIvgiKds-----sgd~~~~~~~~~~ 200 (315)
T 3na8_A 128 ISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREV--DNVTMVKES-----TGDIQRMHKLRLL 200 (315)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHS--TTEEEEEEC-----SSCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcC--CCEEEEECC-----CCCHHHHHHHHHH
Confidence 653 4544 5555566667788775421 134555554 443 479999732 3467777777765
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
. +.+..+.+ |-. +.+...+.+|++|++-|.+=+-++
T Consensus 201 ~------~~~f~v~~--G~D--~~~l~~l~~G~~G~is~~an~~P~ 236 (315)
T 3na8_A 201 G------EGRVPFYN--GCN--PLALEAFVAGAKGWCSAAPNLIPT 236 (315)
T ss_dssp T------TTCSCEEE--CCG--GGHHHHHHHTCSEEEESGGGTCHH
T ss_pred c------CCCEEEEe--Cch--HHHHHHHHCCCCEEEechhhhCHH
Confidence 2 23444443 332 224555678999999988755443
No 317
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=93.65 E-value=1.2 Score=42.22 Aligned_cols=177 Identities=12% Similarity=0.097 Sum_probs=104.4
Q ss_pred CHHHHHHHHHHcCC-cEEEEeccCCcCCCCHHHHHHHHhcC--CCCcEEeccccCCHHHHHHHHHcCcCEEEEeccC---
Q 015899 198 DPVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAG--VKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV--- 271 (398)
Q Consensus 198 dp~~iA~aY~~~GA-~aISVLTd~~~F~Gs~edL~~Ir~a~--v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai--- 271 (398)
...++++.....-. ..+-|+.-|.|- +|..+++.. .++.|=..|.--.+ .....+.+||+.|+|+.+=
T Consensus 21 ~~~~l~~~l~~~~~~~~vev~v~Pp~~-----~L~~v~~~~~~~~i~vgAQn~~~~~-~~~mL~d~G~~~ViiGHSERR~ 94 (244)
T 2v5b_A 21 LLVPLIETLNAATFDHDVQCVVAPTFL-----HIPMTKARLTNPKFQIAAQNAGNAD-ALASLKDYGISWVVLGHSERRL 94 (244)
T ss_dssp CCHHHHHHHHHCCCCSCCEEEEEECGG-----GHHHHHHHCCCTTEEEEESCCCCHH-HHHHHHHTTCCEEEECCHHHHH
T ss_pred HHHHHHHHHHhhccccCceEEEeCcHH-----HHHHHHHHhcCCCceEEeccCCCCC-CHHHHHHcCCCEEEeCchhhhh
Confidence 45567777655211 234455455544 888887651 24556667742212 2555678999999999983
Q ss_pred -C--ChHHHHHHHHHHHHcCCcEEEEcC-CHHH-------------HHHHhccCCCc-----EE--------eeccccCc
Q 015899 272 -L--PDLDIRYMTKICKLLGLTALVEVH-DERE-------------MDRVLGIEGIE-----LI--------GINNRNLE 321 (398)
Q Consensus 272 -L--~~~~L~~Li~~a~~LGL~~LVEVh-t~eE-------------l~rAl~l~Ga~-----iI--------GINnRdL~ 321 (398)
+ +++.+..=++.|.+.||.++++|. +++| ++.++..-+++ +| |+. +
T Consensus 95 ~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleereag~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPvWAIGTG----~ 170 (244)
T 2v5b_A 95 YYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTG----K 170 (244)
T ss_dssp HSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTGGGGGEEEEECCHHHHSSS----C
T ss_pred ccCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHcCCEEEEECCHHHhCCC----C
Confidence 2 455566667888899999999997 4554 22333211221 22 322 1
Q ss_pred ccccChhhHHHHhhhhcc---cccc---cCCceEEEecCCCCHHHHHHHHH-cCCCEEEEcccccCCCChHHHH
Q 015899 322 TFEVDNSNTKKLLEGERG---EIIR---QKNIIVVGESGLFTPDDIAYVQE-AGVKAVLVGESIVKQDDPGKGI 388 (398)
Q Consensus 322 tf~vDl~~t~~L~~~i~~---~~i~---~~~v~vVAESGI~t~eD~~~l~~-~GadaVLVGeaLmk~~dp~~~i 388 (398)
+ -+.+...+....+|. ..+- ...+.++..|++ +|+.+..+.. -.+||+|||.+=.+ ++-...+
T Consensus 171 ~--Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGgASL~-~~F~~Ii 240 (244)
T 2v5b_A 171 V--ATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSV-TAKNARTLYQMRDINGFLVGGASLK-PEFVEII 240 (244)
T ss_dssp C--CCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCC-CHHHHHHHHTSTTCCEEEESGGGSS-TTHHHHH
T ss_pred C--CCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCC-CHhHHHHHhcCCCCCeeeechHHHH-HHHHHHH
Confidence 1 234444444333332 0010 124677778888 7888887764 47999999999888 6654444
No 318
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=93.65 E-value=5.2 Score=38.30 Aligned_cols=165 Identities=16% Similarity=0.117 Sum_probs=98.9
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHH-HHHHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFE-NLEAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~e-dL~~I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++++.+.+.|+++|-++ |--+++.=+.+ ..+.+ ++. .-.+||+..=.-.+.. +...|..+|||+|++..
T Consensus 24 ~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 24 AGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 456677889999999886 22222222333 32322 222 2368999654433433 23456678999999988
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEE-------c-CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVE-------V-HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGE 337 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVE-------V-ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i 337 (398)
-.. +++. .+++-..|...++.+++= + =+.+.+.+..+. ..++||-.. .-|+....+++...
T Consensus 104 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiKds-----~gd~~~~~~~~~~~ 176 (297)
T 2rfg_A 104 GYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAAL--PRIVGVKDA-----TTDLARISRERMLI 176 (297)
T ss_dssp CTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTS--TTEEEEEEC-----SCCTTHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcC--CCEEEEEeC-----CCCHHHHHHHHHhc
Confidence 754 4555 445556677778887652 1 155666665554 579999722 23566777776542
Q ss_pred cccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 338 RGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 338 ~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
+.+..+. +|-. +.+...+.+|++|++-|.+=+-+
T Consensus 177 ------~~~f~v~--~G~d--~~~l~~l~~G~~G~is~~an~~P 210 (297)
T 2rfg_A 177 ------NKPFSFL--SGDD--MTAIAYNASGGQGCISVSANIAP 210 (297)
T ss_dssp ------CSCCEEE--ESCG--GGHHHHHHTTCCEEEESGGGTCH
T ss_pred ------CCCEEEE--eCcH--HHHHHHHHCCCCEEEecHHHhhH
Confidence 2344443 3432 23455667999999999875543
No 319
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=93.64 E-value=2.3 Score=41.14 Aligned_cols=175 Identities=16% Similarity=0.157 Sum_probs=120.1
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccC----
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV---- 271 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai---- 271 (398)
.-||+..|...+++||++|-|---+.--.=...|+..+|+. +..|+=---. .++.-+.-|...--+.|.|.-.-
T Consensus 52 ~PDpv~aA~~ae~aGAdGITvHlReDrRHI~d~Dv~~L~~~-i~t~lNlEma-~t~emi~ial~~kP~~vtLVPEkreE~ 129 (278)
T 3gk0_A 52 YPDPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPR-VKTRMNLECA-VTPEMLDIACEIRPHDACLVPEKRSEL 129 (278)
T ss_dssp CSCHHHHHHHHHHTTCSEEEEECCTTCSSSCHHHHHHHHHH-CSSCEEEEEC-SSHHHHHHHHHHCCSEEEECCCSGGGB
T ss_pred CCCHHHHHHHHHHcCCCEEEeccCCCcccCCHHHHHHHHHH-cCCCEEeecC-CCHHHHHHHHHcCCCEEEECCCCCCCc
Confidence 45899999999999999999943333333568899999986 7777622222 46677888999999999997653
Q ss_pred --------CC-hHHHHHHHHHHHHcCCcE--EEEcCCHHHHHHHhccCCCcEEeeccccCccccc------ChhhHHHHh
Q 015899 272 --------LP-DLDIRYMTKICKLLGLTA--LVEVHDEREMDRVLGIEGIELIGINNRNLETFEV------DNSNTKKLL 334 (398)
Q Consensus 272 --------L~-~~~L~~Li~~a~~LGL~~--LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~v------Dl~~t~~L~ 334 (398)
.. .+.|+.+++..+..|+.+ ++| -+.+.++.|.++ |++.|=+-.-.|.+..- .++...+.+
T Consensus 130 TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFID-pd~~qI~aA~~~-GAd~IELhTG~YA~a~~~~~~~~el~rl~~aA 207 (278)
T 3gk0_A 130 TTEGGLDVVGHFDAVRAACKQLADAGVRVSLFID-PDEAQIRAAHET-GAPVIELHTGRYADAHDAAEQQREFERIATGV 207 (278)
T ss_dssp CSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHHHH-TCSEEEECCHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred CCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHHHh-CcCEEEEecchhhccCCchhHHHHHHHHHHHH
Confidence 12 345999999999999965 555 689999999998 99998774332222111 122222222
Q ss_pred hhhcccccccCCceEEEecCCCCHHHHHHHHHc-CCCEEEEcccccC
Q 015899 335 EGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA-GVKAVLVGESIVK 380 (398)
Q Consensus 335 ~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~-GadaVLVGeaLmk 380 (398)
... ..-+.-|-|.-|+ +.+.+..+... +..-+=||-+|+.
T Consensus 208 ~~A-----~~lGL~VnAGHGL-~y~Nv~~ia~ip~i~ElnIGHaiIa 248 (278)
T 3gk0_A 208 DAG-----IALGLKVNAGHGL-HYTNVQAIAALPGIAELNIGHAIVA 248 (278)
T ss_dssp HHH-----HHTTCEEEECTTC-CTTTHHHHHTCTTEEEEEECHHHHH
T ss_pred HHH-----HHcCCEEecCCCC-CHHHHHHHHhCCCCeEEecCHHHHH
Confidence 111 1236778888888 66667665443 6788888888764
No 320
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.57 E-value=3.1 Score=39.82 Aligned_cols=164 Identities=13% Similarity=0.100 Sum_probs=100.3
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEec-----cCCcCCCCHHHH-HHHHhcCCCCcE--EeccccCCHHHHHHHHHcCcCEEE
Q 015899 195 EDFDPVEIARSYEKGGAACLSILT-----DEKYFKGSFENL-EAVRSAGVKCPL--LCKEFIVDAWQIYYARTKGADAVL 266 (398)
Q Consensus 195 ~~~dp~~iA~aY~~~GA~aISVLT-----d~~~F~Gs~edL-~~Ir~a~v~lPV--L~KDFIid~~QI~eAr~~GADaVL 266 (398)
...+-.++++...+.|...|=+-. +-.++ ++.+.+ +.+++. .++|+ +. -+...|..|..+|+|.|.
T Consensus 28 ~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~-~d~~~~~~~~~~~-~~~~~~~l~----~~~~~i~~a~~aG~~~v~ 101 (302)
T 2ftp_A 28 EVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQM-AGSAEVFAGIRQR-PGVTYAALA----PNLKGFEAALESGVKEVA 101 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGG-TTHHHHHHHSCCC-TTSEEEEEC----CSHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHHcCcCEEEECCCcCccccccc-cCHHHHHHHhhhc-CCCEEEEEe----CCHHHHHHHHhCCcCEEE
Confidence 345677889999999999988852 11223 344333 333322 34454 33 256789999999999998
Q ss_pred EeccC----------CCh----HHHHHHHHHHHHcCCcEEEEc-----------CCHHHHHHHh----ccCCCcEEeecc
Q 015899 267 LIAAV----------LPD----LDIRYMTKICKLLGLTALVEV-----------HDEREMDRVL----GIEGIELIGINN 317 (398)
Q Consensus 267 Liaai----------L~~----~~L~~Li~~a~~LGL~~LVEV-----------ht~eEl~rAl----~l~Ga~iIGINn 317 (398)
+..+. ++. +.+.+.+++|++.|+.+-+++ ++.+++.+.. ++ |++.|.+-.
T Consensus 102 i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~-G~d~i~l~D 180 (302)
T 2ftp_A 102 VFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQM-GCYEVSLGD 180 (302)
T ss_dssp EEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHc-CCCEEEEeC
Confidence 73332 221 336788999999999975443 4667766655 55 999888872
Q ss_pred ccCcccccChhhHHHHhhhhcccccccCCceEE-E---ecCCCCHHHHHHHHHcCCCEE
Q 015899 318 RNLETFEVDNSNTKKLLEGERGEIIRQKNIIVV-G---ESGLFTPDDIAYVQEAGVKAV 372 (398)
Q Consensus 318 RdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vV-A---ESGI~t~eD~~~l~~~GadaV 372 (398)
. ... ..++...++++.++.. + | ++++. = -+|+. .+......++|++-|
T Consensus 181 T--~G~-~~P~~~~~lv~~l~~~-~-~-~~~l~~H~Hn~~Gla-~An~laAv~aGa~~v 232 (302)
T 2ftp_A 181 T--IGV-GTAGATRRLIEAVASE-V-P-RERLAGHFHDTYGQA-LANIYASLLEGIAVF 232 (302)
T ss_dssp S--SSC-CCHHHHHHHHHHHTTT-S-C-GGGEEEEEBCTTSCH-HHHHHHHHHTTCCEE
T ss_pred C--CCC-cCHHHHHHHHHHHHHh-C-C-CCeEEEEeCCCccHH-HHHHHHHHHhCCCEE
Confidence 1 111 2456666666654321 2 2 23332 2 36773 445666778899765
No 321
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=93.57 E-value=4.6 Score=38.73 Aligned_cols=163 Identities=17% Similarity=0.140 Sum_probs=97.6
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHHHH-HHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFENL-EAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL-~~I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++++.+.+.|+++|-++ |--+++.=+.+.- +.+ ++. .-.+||+..=.-.+.. +...|..+|||+|++..
T Consensus 36 ~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 36 TKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 455677889999999987 2222222233322 222 322 2369999654433433 24456788999999988
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEE-c-------CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVE-V-------HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGE 337 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVE-V-------ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i 337 (398)
-.. +++. ++++-..|...++.+++= + =+.+.+.+..+. ..++||-.. .-|+....+++...
T Consensus 116 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiKds-----sgd~~~~~~~~~~~ 188 (301)
T 1xky_A 116 PYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSEI--ENIVAIKDA-----GGDVLTMTEIIEKT 188 (301)
T ss_dssp CCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHTS--TTEEEEEEC-----SSCHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcC--CCEEEEEcC-----CCCHHHHHHHHHhc
Confidence 754 4545 445555666678887652 1 145666665554 579999732 23677777777642
Q ss_pred cccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccccc
Q 015899 338 RGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIV 379 (398)
Q Consensus 338 ~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLm 379 (398)
+.+..+. +|-. +.+.....+|++|++-|.+=+
T Consensus 189 ------~~~f~v~--~G~d--~~~l~~l~~G~~G~is~~an~ 220 (301)
T 1xky_A 189 ------ADDFAVY--SGDD--GLTLPAMAVGAKGIVSVASHV 220 (301)
T ss_dssp ------CTTCEEE--ESSG--GGHHHHHHTTCCEEEESTHHH
T ss_pred ------CCCeEEE--ECcH--HHHHHHHHcCCCEEEcCHHHh
Confidence 2344443 3432 235556779999999886643
No 322
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=93.53 E-value=0.1 Score=52.07 Aligned_cols=72 Identities=25% Similarity=0.155 Sum_probs=56.3
Q ss_pred HHHHHHHHHcCCcEEEEec--cCCcC--CCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCC
Q 015899 200 VEIARSYEKGGAACLSILT--DEKYF--KGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLT--d~~~F--~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (398)
.+.|+.+.++||++|.|-. -..+. ...++.+..+++. ++.||+.-..|.++.++.++..+|||+|.+...++
T Consensus 236 ~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~-~~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l 311 (380)
T 1p4c_A 236 AEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAK-TGKPVLIDSGFRRGSDIVKALALGAEAVLLGRATL 311 (380)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHH-HCSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHH-cCCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHH
Confidence 4678999999999999921 11111 1135677788876 78899999999999999999999999999987765
No 323
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=93.51 E-value=1 Score=41.76 Aligned_cols=125 Identities=13% Similarity=0.123 Sum_probs=76.4
Q ss_pred HHHHHHHhcCCCCcEEeccccCCHHHH-HHHHHcCcCEEEEeccCCChHHHHHHHHHHHHc-CCcEEEE-cCCHHHHHHH
Q 015899 228 ENLEAVRSAGVKCPLLCKEFIVDAWQI-YYARTKGADAVLLIAAVLPDLDIRYMTKICKLL-GLTALVE-VHDEREMDRV 304 (398)
Q Consensus 228 edL~~Ir~a~v~lPVL~KDFIid~~QI-~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~L-GL~~LVE-Vht~eEl~rA 304 (398)
+.+..+++. -=+||++.+-.-+-.++ ..+...|++.|=+-.. ++..++.+-+.++.+ ++.+-.. +.+.++++.|
T Consensus 9 ~~~~~l~~~-~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k--~~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A 85 (224)
T 1vhc_A 9 QIIEKLREL-KIVPVIALDNADDILPLADTLAKNGLSVAEITFR--SEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLA 85 (224)
T ss_dssp HHHHHHHHH-CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETT--STTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHH
T ss_pred HHHHHHHHC-CeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEecc--CchHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHH
Confidence 345556665 45789987643344444 4557889998888643 322233333355665 3333222 2478999999
Q ss_pred hccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEE
Q 015899 305 LGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLV 374 (398)
Q Consensus 305 l~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLV 374 (398)
+++ ||+.|=..+ .|.+.... +.. .+..++- |+.|++++.++.++|+|.|-+
T Consensus 86 ~~a-GAd~v~~p~-------~d~~v~~~-ar~--------~g~~~i~--Gv~t~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 86 KSS-GADFVVTPG-------LNPKIVKL-CQD--------LNFPITP--GVNNPMAIEIALEMGISAVKF 136 (224)
T ss_dssp HHH-TCSEEECSS-------CCHHHHHH-HHH--------TTCCEEC--EECSHHHHHHHHHTTCCEEEE
T ss_pred HHC-CCCEEEECC-------CCHHHHHH-HHH--------hCCCEEe--ccCCHHHHHHHHHCCCCEEEE
Confidence 998 999884332 23332222 221 1223332 699999999999999999877
No 324
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=93.50 E-value=0.39 Score=45.40 Aligned_cols=82 Identities=13% Similarity=0.141 Sum_probs=57.5
Q ss_pred CHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcc
Q 015899 297 DEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGE 376 (398)
Q Consensus 297 t~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGe 376 (398)
+..++-++....||..|-+. .+-.-|.-.++....+.+. .++++..-.+|.++.++..++.+|||+|++|.
T Consensus 66 ~p~~~A~~~~~~GA~~isvl-t~~~~f~G~~~~l~~i~~~--------v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~ 136 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVL-TEPHRFGGSLLDLKRVREA--------VDLPLLRKDFVVDPFMLEEARAFGASAALLIV 136 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEE-CCCSSSCCCHHHHHHHHHH--------CCSCEEEESCCCSHHHHHHHHHTTCSEEEEEH
T ss_pred CHHHHHHHHHHcCCCEEEEe-cchhhhccCHHHHHHHHHh--------cCCCEEECCcCCCHHHHHHHHHcCCCEEEECc
Confidence 44555544444599999884 2333344455554555443 36778889999999999999999999999999
Q ss_pred cccCCCChHHHH
Q 015899 377 SIVKQDDPGKGI 388 (398)
Q Consensus 377 aLmk~~dp~~~i 388 (398)
+.+. .+..+.+
T Consensus 137 ~~l~-~~l~~l~ 147 (254)
T 1vc4_A 137 ALLG-ELTGAYL 147 (254)
T ss_dssp HHHG-GGHHHHH
T ss_pred cchH-HHHHHHH
Confidence 9887 5544443
No 325
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=93.48 E-value=0.11 Score=51.91 Aligned_cols=44 Identities=11% Similarity=0.108 Sum_probs=39.9
Q ss_pred CceEEEecCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHh
Q 015899 346 NIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITG 390 (398)
Q Consensus 346 ~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~ 390 (398)
++++|+-||| |++++.++.+.| ||.|.+|.+++..+|....+++
T Consensus 279 ~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~lanPdl~~k~~~ 323 (362)
T 4ab4_A 279 GGPYIVNERF-DKASANAALASGKADAVAFGVPFIANPDLPARLAA 323 (362)
T ss_dssp CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHT
T ss_pred CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHc
Confidence 4689999999 999999999998 9999999999999998877765
No 326
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=93.44 E-value=0.13 Score=46.48 Aligned_cols=85 Identities=21% Similarity=0.161 Sum_probs=58.3
Q ss_pred CHHHHHHHHHHcCCcEEEEe----cc--CC-cCCCCHHHHHHHHhcCCC-CcEEeccccCCHHHHHHHHHcCcCEEEEec
Q 015899 198 DPVEIARSYEKGGAACLSIL----TD--EK-YFKGSFENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIA 269 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVL----Td--~~-~F~Gs~edL~~Ir~a~v~-lPVL~KDFIid~~QI~eAr~~GADaVLLia 269 (398)
++.+ ++.+.+.||+.|-+- |. ++ +...+++.++.+++. ++ +||+.-..| ++..+.++..+|||+|.++.
T Consensus 125 t~~e-~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~-~~~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs 201 (227)
T 2tps_A 125 TMSE-VKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQ-GISIPIVGIGGI-TIDNAAPVIQAGADGVSMIS 201 (227)
T ss_dssp SHHH-HHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHT-TCCCCEEEESSC-CTTTSHHHHHTTCSEEEESH
T ss_pred CHHH-HHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHh-CCCCCEEEEcCC-CHHHHHHHHHcCCCEEEEhH
Confidence 5666 455567799998861 21 11 122367889999886 77 999876654 48889899999999999998
Q ss_pred cCCCh----HHHHHHHHHHH
Q 015899 270 AVLPD----LDIRYMTKICK 285 (398)
Q Consensus 270 aiL~~----~~L~~Li~~a~ 285 (398)
++... +.+++|.+..+
T Consensus 202 ~i~~~~d~~~~~~~~~~~~~ 221 (227)
T 2tps_A 202 AISQAEDPESAARKFREEIQ 221 (227)
T ss_dssp HHHTSSCHHHHHHHHHHHHH
T ss_pred HhhcCCCHHHHHHHHHHHHH
Confidence 87742 23455554443
No 327
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=93.42 E-value=2.3 Score=40.40 Aligned_cols=180 Identities=16% Similarity=0.170 Sum_probs=122.7
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCC----
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL---- 272 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL---- 272 (398)
-||+..|...+++||++|-|---+.--.=...|+..+|+. ++.|+=---. .++..+.-|...-.+.|.|.-.-.
T Consensus 25 Pdpv~aA~~ae~aGAdgITvHlReDrRHI~d~Dv~~L~~~-~~~~lNlE~a-~t~emi~ia~~~kP~~vtLVPE~r~e~T 102 (243)
T 1m5w_A 25 PDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQT-LDTRMNLEMA-VTEEMLAIAVETKPHFCCLVPEKRQEVT 102 (243)
T ss_dssp SCHHHHHHHHHTTTCSEEEEECCTTCSSSCHHHHHHHHHH-CSSEEEEEEC-SSHHHHHHHHHHCCSEEEECCCCSSCSS
T ss_pred CCHHHHHHHHHHcCCCEEEeCCCCCcccCCHHHHHHHHHh-cCCCEEeccC-CCHHHHHHHHHcCCCEEEECCCCCCCcC
Confidence 4899999999999999999976555556688999999986 6766532222 455667889999999999976521
Q ss_pred --------Ch-HHHHHHHHHHHHcCCcEEEEc-CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcc-cc
Q 015899 273 --------PD-LDIRYMTKICKLLGLTALVEV-HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERG-EI 341 (398)
Q Consensus 273 --------~~-~~L~~Li~~a~~LGL~~LVEV-ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~-~~ 341 (398)
.+ +.|+..++..+..|+.+=+=+ -+.+.++.|.++ |++.|=+-.-.|.+..-+.+...+|...... ..
T Consensus 103 TegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDpd~~qi~aA~~~-GA~~IELhTG~Ya~a~~~~~~~~el~~i~~aa~~ 181 (243)
T 1m5w_A 103 TEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEV-GAPFIEIHTGCYADAKTDAEQAQELARIAKAATF 181 (243)
T ss_dssp CCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHT-TCSEEEEECHHHHHCCSHHHHHHHHHHHHHHHHH
T ss_pred CCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHh-CcCEEEEechhhhcCCCchhHHHHHHHHHHHHHH
Confidence 22 448889999999999884444 699999999998 9999876533332222111111122111000 00
Q ss_pred cccCCceEEEecCCCCHHHHHHHHHc-CCCEEEEcccccC
Q 015899 342 IRQKNIIVVGESGLFTPDDIAYVQEA-GVKAVLVGESIVK 380 (398)
Q Consensus 342 i~~~~v~vVAESGI~t~eD~~~l~~~-GadaVLVGeaLmk 380 (398)
-..-+.-|-|.-|+ +.+.+..+... +..-+=||-+|+.
T Consensus 182 A~~lGL~VnAGHgL-~y~Nv~~ia~ip~i~ElnIGHaiia 220 (243)
T 1m5w_A 182 AASLGLKVNAGHGL-TYHNVKAIAAIPEMHELNIGHAIIG 220 (243)
T ss_dssp HHHTTCEEEEESSC-CTTTHHHHHTCTTEEEEEECHHHHH
T ss_pred HHHcCCEEecCCCC-CHHHHHHHhhCCCCeEEccCHHHHH
Confidence 01246788888888 67777777653 6678888887763
No 328
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=93.41 E-value=0.19 Score=46.60 Aligned_cols=170 Identities=10% Similarity=0.067 Sum_probs=96.5
Q ss_pred HHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE----eccccCCH-HHHHHHHHcCcCEEEEeccCCC
Q 015899 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL----CKEFIVDA-WQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL----~KDFIid~-~QI~eAr~~GADaVLLiaaiL~ 273 (398)
..+++..... ...++=|-++ -|...+++-++.+++. .+.||+ .-|.--+- .+...+... ||+|.+.+ ...
T Consensus 13 al~l~~~l~~-~v~~~KvG~~-l~~~~G~~~v~~L~~~-~g~~VflDlK~~DIpnTv~~a~~~~~~~-ad~vTvh~-~~G 87 (215)
T 3ve9_A 13 PEETLRKLNG-KVAGIKVGWP-LLLNLGKEKVKELVGL-VDGIKILDLKLADIDNTMILIVDELKDI-TNSFIAHA-FVG 87 (215)
T ss_dssp CHHHHHHHHT-TSSEEEEEHH-HHHHHCHHHHHHHHTT-CCSEEEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEG-GGC
T ss_pred HHHHHHHhCC-cCcEEEecHH-HHHhhCHHHHHHHHHh-cCCcEEEEecccCchhHHHHHHHHHHHh-hheEEEeC-CCC
Confidence 4455555532 3556666443 2444567788888873 478887 34532221 234555667 99998855 333
Q ss_pred -hHHHHHHHHHHHHcCCcEEEEcCCH--------HHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhccccccc
Q 015899 274 -DLDIRYMTKICKLLGLTALVEVHDE--------REMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQ 344 (398)
Q Consensus 274 -~~~L~~Li~~a~~LGL~~LVEVht~--------eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~ 344 (398)
.+.++.+ + ...|+.+|.+..+. .-++.+.++ |.+-+-+.. ...+....+.+. . +
T Consensus 88 ~~~~~~~~-~--~~~~v~vLts~s~~~~~~~~v~~~a~~a~~~-G~~GvV~sa-------t~~~e~~~ir~~-----~-~ 150 (215)
T 3ve9_A 88 VEGSLASL-S--QRVDLFLVLSMSHPGWNDAFYPYLREVARRV-NPKGFVAPA-------TRPSMISRVKGD-----F-P 150 (215)
T ss_dssp TTTTHHHH-H--HHSEEEEECCCSSTTCCGGGHHHHHHHHHHH-CCSEEECCT-------TSHHHHHHHHHH-----C-T
T ss_pred cHHHHHhH-h--cCCCEEEEEecCCcchHHHHHHHHHHHHHHc-CCCceeeCC-------CCHHHHHHHHHh-----C-C
Confidence 3346655 2 23455555555442 122233343 533111111 012222333332 1 2
Q ss_pred CCceEEEecCCCCHH--HHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 345 KNIIVVGESGLFTPD--DIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 345 ~~v~vVAESGI~t~e--D~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
+ .++.-.||. ++ +...+.++|+|-++||.+|++++||.++++++..
T Consensus 151 -~-f~~v~pGI~-~~g~~~~~a~~~Gad~iVvGr~I~~a~dp~~a~~~i~~ 198 (215)
T 3ve9_A 151 -D-KLVISPGVG-TQGAKPGIALCHGADYEIVGRSVYQSADPVRKLEEIVR 198 (215)
T ss_dssp -T-SEEEECCTT-STTCCTTHHHHTTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred -C-cEEEcCCCC-cCcCCHHHHHHcCCCEEEeCHHHcCCCCHHHHHHHHHH
Confidence 3 455568885 34 5777788999999999999999999999988753
No 329
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=93.40 E-value=0.46 Score=47.10 Aligned_cols=119 Identities=11% Similarity=0.108 Sum_probs=87.4
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. .....|..+.- |-+. ..+..++++.+++.|...| |+.+-..+++.+..+|+. +++||
T Consensus 183 ~v~avR~a~--g~~~~l~vDan------~~~~-~~~A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 248 (383)
T 3i4k_A 183 RVAELAREV--GDRVSLRIDIN------ARWD-RRTALHYLPILAEAGVELF----EQPTPADDLETLREITRR-TNVSV 248 (383)
T ss_dssp HHHHHHHTT--TTTSEEEEECT------TCSC-HHHHHHHHHHHHHTTCCEE----ESCSCTTCHHHHHHHHHH-HCCEE
T ss_pred HHHHHHHHc--CCCCEEEEECC------CCCC-HHHHHHHHHHHHhcCCCEE----ECCCChhhHHHHHHHHhh-CCCCE
Confidence 345555542 12356777651 2122 2244567889999886655 345566789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEc
Q 015899 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEV 295 (398)
...+-+.+++++.++...| +|.|.+....... .+...+...|+..|+.+++-+
T Consensus 249 a~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 303 (383)
T 3i4k_A 249 MADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGAT 303 (383)
T ss_dssp EESTTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred EecCccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeCC
Confidence 9999999999999888766 8999998887754 568888899999999988654
No 330
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=93.36 E-value=0.66 Score=43.32 Aligned_cols=129 Identities=15% Similarity=0.230 Sum_probs=79.9
Q ss_pred CCcEEeccccCCHHHHHHH-HHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEE---cCCHHHHHHHhccCCCcEEe
Q 015899 239 KCPLLCKEFIVDAWQIYYA-RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE---VHDEREMDRVLGIEGIELIG 314 (398)
Q Consensus 239 ~lPVL~KDFIid~~QI~eA-r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVE---Vht~eEl~rAl~l~Ga~iIG 314 (398)
=+||++-+-.-+-.++.+| .+.|.+.|=+ +..++..++.+-...+++. +++|- |-|.++++.+.++ |+++|-
T Consensus 15 vi~Vir~~~~~~a~~~a~al~~gGi~~iEv--t~~t~~a~~~I~~l~~~~p-~~~IGAGTVlt~~~a~~ai~A-GA~fiv 90 (217)
T 3lab_A 15 LIPVIVIDDLVHAIPMAKALVAGGVHLLEV--TLRTEAGLAAISAIKKAVP-EAIVGAGTVCTADDFQKAIDA-GAQFIV 90 (217)
T ss_dssp EEEEECCSCGGGHHHHHHHHHHTTCCEEEE--ETTSTTHHHHHHHHHHHCT-TSEEEEECCCSHHHHHHHHHH-TCSEEE
T ss_pred EEEEEEcCCHHHHHHHHHHHHHcCCCEEEE--eCCCccHHHHHHHHHHHCC-CCeEeeccccCHHHHHHHHHc-CCCEEE
Confidence 3688887754455666666 4668887655 4445544554444444543 13332 4589999999998 999997
Q ss_pred eccccCcccccChhhHHHHhhhhcccccccCCc------eEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCCh--HH
Q 015899 315 INNRNLETFEVDNSNTKKLLEGERGEIIRQKNI------IVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDP--GK 386 (398)
Q Consensus 315 INnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v------~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp--~~ 386 (398)
.-+ .|.+.... ... .++ +++. |+.|++++.+..++|+|.+= ++-.... ..
T Consensus 91 sP~-------~~~evi~~-~~~--------~~v~~~~~~~~~P--G~~TptE~~~A~~~Gad~vK----~FPa~~~gG~~ 148 (217)
T 3lab_A 91 SPG-------LTPELIEK-AKQ--------VKLDGQWQGVFLP--GVATASEVMIAAQAGITQLK----CFPASAIGGAK 148 (217)
T ss_dssp ESS-------CCHHHHHH-HHH--------HHHHCSCCCEEEE--EECSHHHHHHHHHTTCCEEE----ETTTTTTTHHH
T ss_pred eCC-------CcHHHHHH-HHH--------cCCCccCCCeEeC--CCCCHHHHHHHHHcCCCEEE----ECccccccCHH
Confidence 654 22222222 111 234 5554 89999999999999999882 3333322 35
Q ss_pred HHHhhhc
Q 015899 387 GITGLFG 393 (398)
Q Consensus 387 ~i~~L~~ 393 (398)
.++.|.+
T Consensus 149 ~lkal~~ 155 (217)
T 3lab_A 149 LLKAWSG 155 (217)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 6666654
No 331
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=93.32 E-value=0.22 Score=48.79 Aligned_cols=134 Identities=20% Similarity=0.273 Sum_probs=86.7
Q ss_pred CccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCc--------EEEEeccCCcCCCCH-HHH
Q 015899 160 ARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAA--------CLSILTDEKYFKGSF-ENL 230 (398)
Q Consensus 160 ~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~--------aISVLTd~~~F~Gs~-edL 230 (398)
++.|.++++. ....|+.=.|-.|-- + ...++ +..-||+. +|-+-..--.|-|+. +-+
T Consensus 133 T~~~v~~~~~------~~~~i~dTRKT~PGl---R---~leky--AV~~GGg~nHR~gL~D~vLIKdNHi~~~G~i~~Av 198 (300)
T 3l0g_A 133 TRQFVDEVSG------TKVKIRSTRKTTPGL---R---MLDKY--SVCIGGGESYRDNLCDGVLIKDNHIASCGSITLAI 198 (300)
T ss_dssp HHHHHHHTTT------SSCEEECCSCCCTTC---H---HHHHH--HHHHTTCBCSCSSTTSCEEECHHHHHHHSCHHHHH
T ss_pred HHHHHHHhCC------CCEEEeecCccChhh---h---HHHHH--HHHhcCCcccccCCcceEEEcHhHHHHhCCHHHHH
Confidence 4567766653 236788888888842 1 11222 23345652 233311111244664 446
Q ss_pred HHHHhcCCCCcEE--eccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHHHHh
Q 015899 231 EAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVL 305 (398)
Q Consensus 231 ~~Ir~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~rAl 305 (398)
+.+|+....+||. +.. ..|+.+|..+|||.|+|+- ++++++++.++..+ | .+.+|++ |++.+....
T Consensus 199 ~~ar~~~p~~kIeVEv~t----l~e~~eAl~aGaDiImLDn--~s~~~l~~av~~~~--~-~v~leaSGGIt~~~i~~~A 269 (300)
T 3l0g_A 199 QRLRKNLKNEYIAIECDN----ISQVEESLSNNVDMILLDN--MSISEIKKAVDIVN--G-KSVLEVSGCVNIRNVRNIA 269 (300)
T ss_dssp HHHHHHSSSCCEEEEESS----HHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHHT--T-SSEEEEESSCCTTTHHHHH
T ss_pred HHHHHhCCCCCEEEEECC----HHHHHHHHHcCCCEEEECC--CCHHHHHHHHHhhc--C-ceEEEEECCCCHHHHHHHH
Confidence 6667642345554 443 4789999999999999976 78888888887654 2 6888886 888888888
Q ss_pred ccCCCcEEeecc
Q 015899 306 GIEGIELIGINN 317 (398)
Q Consensus 306 ~l~Ga~iIGINn 317 (398)
+. |+|+|++..
T Consensus 270 ~t-GVD~IsvGa 280 (300)
T 3l0g_A 270 LT-GVDYISIGC 280 (300)
T ss_dssp TT-TCSEEECGG
T ss_pred Hc-CCCEEEeCc
Confidence 86 999999974
No 332
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=93.27 E-value=0.15 Score=45.44 Aligned_cols=85 Identities=22% Similarity=0.166 Sum_probs=58.0
Q ss_pred CHHHHHHHHHHcCCcEEEEec-cC-----CcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccC
Q 015899 198 DPVEIARSYEKGGAACLSILT-DE-----KYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLT-d~-----~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (398)
++.++ ..+.+.|++.|-+-+ -+ ++...+++.++.+++. +++||+.-..| .+.++.++..+|||+|.++..+
T Consensus 117 t~~e~-~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs~i 193 (215)
T 1xi3_A 117 SLEEA-LEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVES-VKIPVVAIGGI-NKDNAREVLKTGVDGIAVISAV 193 (215)
T ss_dssp SHHHH-HHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHH-CSSCEEEESSC-CTTTHHHHHTTTCSEEEESHHH
T ss_pred CHHHH-HHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHh-CCCCEEEECCc-CHHHHHHHHHcCCCEEEEhHHH
Confidence 56664 445667999987632 11 1122357888888876 79999986654 4889999999999999999887
Q ss_pred CChH----HHHHHHHHHH
Q 015899 272 LPDL----DIRYMTKICK 285 (398)
Q Consensus 272 L~~~----~L~~Li~~a~ 285 (398)
.... .+++|.+..+
T Consensus 194 ~~~~d~~~~~~~~~~~~~ 211 (215)
T 1xi3_A 194 MGAEDVRKATEELRKIVE 211 (215)
T ss_dssp HTSSSHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHh
Confidence 6422 3455554443
No 333
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=93.26 E-value=0.3 Score=48.48 Aligned_cols=94 Identities=9% Similarity=-0.013 Sum_probs=75.5
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DL 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~ 275 (398)
+..++++.+++.|...| |+.+-..+++.++.+|+. +++||...+-+.++.++.++...| +|.|.+...... -.
T Consensus 209 ~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 283 (391)
T 2qgy_A 209 QTKSFLKEVSSFNPYWI----EEPVDGENISLLTEIKNT-FNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLI 283 (391)
T ss_dssp HHHHHHHHHGGGCCSEE----ECSSCTTCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHH
T ss_pred HHHHHHHHHHhcCCCeE----eCCCChhhHHHHHHHHhh-CCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHH
Confidence 45577888888887765 444556789999999987 899999999999999999888776 899988777764 45
Q ss_pred HHHHHHHHHHHcCCcEEEEcC
Q 015899 276 DIRYMTKICKLLGLTALVEVH 296 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEVh 296 (398)
+..++.+.|+..|+.+++-+.
T Consensus 284 ~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 284 DIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp HHHHHHHHHHHTTCEECCBCC
T ss_pred HHHHHHHHHHHCCCEEeccCC
Confidence 578889999999999775543
No 334
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=93.24 E-value=0.38 Score=47.29 Aligned_cols=118 Identities=14% Similarity=0.101 Sum_probs=85.7
Q ss_pred HHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE
Q 015899 164 IGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL 243 (398)
Q Consensus 164 ~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL 243 (398)
..++++.. .....|....- |-+. ..+..++++.+++.|...| |+.+-..+++.++.+++. +++||.
T Consensus 190 v~avr~a~--g~d~~l~vDan------~~~~-~~~a~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~iPIa 255 (382)
T 1rvk_A 190 CAAVREAV--GPDIRLMIDAF------HWYS-RTDALALGRGLEKLGFDWI----EEPMDEQSLSSYKWLSDN-LDIPVV 255 (382)
T ss_dssp HHHHHHHH--CTTSEEEEECC------TTCC-HHHHHHHHHHHHTTTCSEE----ECCSCTTCHHHHHHHHHH-CSSCEE
T ss_pred HHHHHHHh--CCCCeEEEECC------CCCC-HHHHHHHHHHHHhcCCCEE----eCCCChhhHHHHHHHHhh-CCCCEE
Confidence 44555432 12456776552 2121 2345577888888887765 445556789999999987 899999
Q ss_pred eccccCC-HHHHHHHHHcC-cCEEEEeccCCC-hHHHHHHHHHHHHcCCcEEEEc
Q 015899 244 CKEFIVD-AWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 244 ~KDFIid-~~QI~eAr~~G-ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~~LVEV 295 (398)
..+-+.+ ++++.++...| +|.|.+...... -.+..++.+.|+..|+.+++-+
T Consensus 256 ~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 310 (382)
T 1rvk_A 256 GPESAAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECEVHG 310 (382)
T ss_dssp ECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred EeCCccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEeecC
Confidence 9999999 99999987775 799999776653 3557888999999999988763
No 335
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=93.21 E-value=6.5 Score=38.09 Aligned_cols=166 Identities=14% Similarity=0.097 Sum_probs=99.6
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHHHHHHH----Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFENLEAV----RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL~~I----r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++++.+.+.|+++|-++ |--+++.=+.+.-..+ .+. .-.+||+..=.-.+.. +...|..+|||+|+++.
T Consensus 46 ~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 46 CNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 345667788999999886 2222222234333222 222 2368999754433443 34466789999999987
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEEc--------CCHHHHHHHhc-cCCCcEEeeccccCcccccChhhHHHHhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVEV--------HDEREMDRVLG-IEGIELIGINNRNLETFEVDNSNTKKLLEG 336 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVEV--------ht~eEl~rAl~-l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~ 336 (398)
-.. +++. .+++-..|...++.+++=- =+.+.+.+..+ . ..++||-.. .-|+....+++..
T Consensus 126 P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pnIvgiKds-----sgd~~~~~~l~~~ 198 (315)
T 3si9_A 126 PYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDF--KNIIGVKDA-----TGKIERASEQREK 198 (315)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHC--TTEEEEEEC-----SCCTHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhhC--CCEEEEEeC-----CCCHHHHHHHHHH
Confidence 653 4444 5555566667788876531 14556666555 4 479999732 3467777777765
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
. +.+..+.+ |-. +.+.....+|++|++-|.+=+-++
T Consensus 199 ~------~~~f~v~~--G~d--~~~l~~l~~G~~G~is~~an~~P~ 234 (315)
T 3si9_A 199 C------GKDFVQLS--GDD--CTALGFNAHGGVGCISVSSNVAPK 234 (315)
T ss_dssp H------CSSSEEEE--SCG--GGHHHHHHTTCCEEEESGGGTCHH
T ss_pred c------CCCeEEEe--cCH--HHHHHHHHcCCCEEEecHHHhhHH
Confidence 2 23444443 332 234456779999999887765543
No 336
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=93.17 E-value=6.1 Score=37.66 Aligned_cols=165 Identities=11% Similarity=0.080 Sum_probs=99.2
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCH-HHHHHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSF-ENLEAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~-edL~~I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++++.+.+.|+++|-++ |--+++.=+. |..+.+ ++. .-.+||+..=.-.+.. +...|..+|||+|++..
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 24 GNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVV 103 (294)
T ss_dssp HHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 355667788999999886 2222222233 333322 322 2368999654433433 23456688999999988
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEE-------c-CCHHHHHHHh-ccCCCcEEeeccccCcccccChhhHHHHhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVE-------V-HDEREMDRVL-GIEGIELIGINNRNLETFEVDNSNTKKLLEG 336 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVE-------V-ht~eEl~rAl-~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~ 336 (398)
-.. +++. .+++-..|...++.+++= + =+.+.+.+.. +. ..++||-. -.-|+....+++..
T Consensus 104 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pnivgiKd-----s~gd~~~~~~~~~~ 176 (294)
T 2ehh_A 104 PYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASEC--ENIVASKE-----STPNMDRISEIVKR 176 (294)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHC--TTEEEEEE-----CCSCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhC--CCEEEEEe-----CCCCHHHHHHHHHh
Confidence 754 5555 445556677778887652 1 1556666655 44 47999972 23467777777764
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
. +.+..+. +|-. +.+.....+|++|++-|.+=+-+
T Consensus 177 ~------~~~f~v~--~G~d--~~~~~~l~~G~~G~is~~an~~P 211 (294)
T 2ehh_A 177 L------GESFSVL--SGDD--SLTLPMMALGAKGVISVANNVMP 211 (294)
T ss_dssp H------CTTSEEE--ESSG--GGHHHHHHTTCCEEEESGGGTCH
T ss_pred c------CCCeEEE--ECcH--HHHHHHHHCCCCEEEeCHHHhhH
Confidence 2 2344443 3432 22455667999999999875543
No 337
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=93.12 E-value=2.1 Score=41.96 Aligned_cols=134 Identities=18% Similarity=0.241 Sum_probs=99.3
Q ss_pred CCCcE-EeccccCCHHHHHHHHHc--------CcCEEEEeccCCChHH----HHHHHHHHHHcCCcEEEE----------
Q 015899 238 VKCPL-LCKEFIVDAWQIYYARTK--------GADAVLLIAAVLPDLD----IRYMTKICKLLGLTALVE---------- 294 (398)
Q Consensus 238 v~lPV-L~KDFIid~~QI~eAr~~--------GADaVLLiaaiL~~~~----L~~Li~~a~~LGL~~LVE---------- 294 (398)
.++|| |.-|-.-+...+.+|..+ |-+.|.++.+-++-++ .++++++|+..|+.+=.|
T Consensus 81 ~~VPVaLHlDHg~~~e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edg 160 (306)
T 3pm6_A 81 ASVPITLHLDHAQDPEIIKRAADLSRSETHEPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDG 160 (306)
T ss_dssp CSSCEEEEEEEECCHHHHHHHHHTC------CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTT
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhhhhccCCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCC
Confidence 58897 566766777889999999 9999999999998543 778899999887766322
Q ss_pred ----------cCCHHHHHHHhccCCCcEEeeccc----cCc--ccccChhhHHHHhhhhcccccccCCceEEE--ecCCC
Q 015899 295 ----------VHDEREMDRVLGIEGIELIGINNR----NLE--TFEVDNSNTKKLLEGERGEIIRQKNIIVVG--ESGLF 356 (398)
Q Consensus 295 ----------Vht~eEl~rAl~l~Ga~iIGINnR----dL~--tf~vDl~~t~~L~~~i~~~~i~~~~v~vVA--ESGI~ 356 (398)
-.+++|+.+..+. |++.+.+.-= .++ +-..|++...++.+.+ +.++++|. .||+
T Consensus 161 v~~~~~~~~~yT~Peea~~Fv~T-gvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v------~~~vpLVlHGgSG~- 232 (306)
T 3pm6_A 161 VQDTVDLEGVLTTPEESEEFVAT-GINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAV------GERVGLVLHGADPF- 232 (306)
T ss_dssp BCCCTTCCCBCCCHHHHHHHHTT-TCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHH------TTTSEEEECSCTTC-
T ss_pred ccccccccccCCCHHHHHHHHHc-CCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHh------CCCCCEEeeCCCCC-
Confidence 2478999887775 9998876422 232 3466888877776542 12455554 4566
Q ss_pred CHHHHHHHHHcCCCEEEEccccc
Q 015899 357 TPDDIAYVQEAGVKAVLVGESIV 379 (398)
Q Consensus 357 t~eD~~~l~~~GadaVLVGeaLm 379 (398)
..++++++.++|+--|=|++.+.
T Consensus 233 p~e~i~~ai~~GV~KiNi~Tdl~ 255 (306)
T 3pm6_A 233 TKEIFEKCIERGVAKVNVNRAVN 255 (306)
T ss_dssp CHHHHHHHHHTTEEEEEESHHHH
T ss_pred CHHHHHHHHHcCCeEEEeChHHH
Confidence 67789999999999999998764
No 338
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=93.10 E-value=0.37 Score=45.66 Aligned_cols=100 Identities=18% Similarity=0.125 Sum_probs=68.7
Q ss_pred ceEEEEeccCCCCCCCCCCCCCHHHH---HHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCC-cEEeccccC--C
Q 015899 177 PALIAEVKKASPSRGILREDFDPVEI---ARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKC-PLLCKEFIV--D 250 (398)
Q Consensus 177 ~~vIAEvKraSPSkG~i~~~~dp~~i---A~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~l-PVL~KDFIi--d 250 (398)
+.+|.|.- |-...+....++..+ ++...+.||+-|-+- |.|++++++.+++. +++ ||..-..|. +
T Consensus 139 ~~vIi~~~---~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~-----~~~~~e~~~~~~~~-~~~~pV~asGGi~~~~ 209 (263)
T 1w8s_A 139 LPLVVESF---PRGGKVVNETAPEIVAYAARIALELGADAMKIK-----YTGDPKTFSWAVKV-AGKVPVLMSGGPKTKT 209 (263)
T ss_dssp CCEEEEEC---CCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEE-----CCSSHHHHHHHHHH-TTTSCEEEECCSCCSS
T ss_pred CeEEEEee---CCCCccccCCCHHHHHHHHHHHHHcCCCEEEEc-----CCCCHHHHHHHHHh-CCCCeEEEEeCCCCCC
Confidence 34677743 211122222345444 567888999998875 34799999999986 677 999888876 5
Q ss_pred HH----HHHHHHHcCcCEEEEeccCCChHHHHHHHHHHH
Q 015899 251 AW----QIYYARTKGADAVLLIAAVLPDLDIRYMTKICK 285 (398)
Q Consensus 251 ~~----QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~ 285 (398)
.. .+.++..+||+++..+.+++..++-..+++...
T Consensus 210 ~~~~l~~i~~~~~aGA~GvsvgraI~~~~dp~~~~~~l~ 248 (263)
T 1w8s_A 210 EEDFLKQVEGVLEAGALGIAVGRNVWQRRDALKFARALA 248 (263)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESHHHHTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEehhhcCCcCHHHHHHHHH
Confidence 54 456667999999999999886555555554443
No 339
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=93.00 E-value=0.19 Score=45.99 Aligned_cols=82 Identities=12% Similarity=0.018 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD 276 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~ 276 (398)
++.++.+++ +.||+.|.+-. .--.|+++.|+.++.. . ++|++.=..| ++..+.+...+|||+|.++.++.. .+
T Consensus 113 t~~e~~~A~-~~Gad~v~~fp--a~~~gG~~~lk~l~~~-~~~ipvvaiGGI-~~~n~~~~l~aGa~~vavgSai~~-~d 186 (207)
T 2yw3_A 113 TPTEVERAL-ALGLSALKFFP--AEPFQGVRVLRAYAEV-FPEVRFLPTGGI-KEEHLPHYAALPNLLAVGGSWLLQ-GN 186 (207)
T ss_dssp SHHHHHHHH-HTTCCEEEETT--TTTTTHHHHHHHHHHH-CTTCEEEEBSSC-CGGGHHHHHTCSSBSCEEESGGGS-SC
T ss_pred CHHHHHHHH-HCCCCEEEEec--CccccCHHHHHHHHhh-CCCCcEEEeCCC-CHHHHHHHHhCCCcEEEEehhhhC-CC
Confidence 577776665 56999998822 1112568999999986 5 8999977664 577899999999999999998886 44
Q ss_pred HHHHHHHHH
Q 015899 277 IRYMTKICK 285 (398)
Q Consensus 277 L~~Li~~a~ 285 (398)
..+..+.++
T Consensus 187 ~~~i~~~a~ 195 (207)
T 2yw3_A 187 LEAVRAKVR 195 (207)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444443
No 340
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=92.99 E-value=0.16 Score=50.39 Aligned_cols=76 Identities=18% Similarity=0.120 Sum_probs=59.8
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCC----CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCC
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKG----SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL 272 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~G----s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL 272 (398)
+..++|+..++.|++.|+|-.- . |.| ..+.++.+|+. +++||+.-..| ++.+..++...| ||.|.+.-.++
T Consensus 251 ~~~~~a~~l~~~G~d~i~v~~~-~-~~~~~~~~~~~~~~i~~~-~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i 326 (365)
T 2gou_A 251 TYTAAAALLNKHRIVYLHIAEV-D-WDDAPDTPVSFKRALREA-YQGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPFI 326 (365)
T ss_dssp HHHHHHHHHHHTTCSEEEEECC-B-TTBCCCCCHHHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCC-C-cCCCCCccHHHHHHHHHH-CCCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHHH
Confidence 3567799999999999999641 1 111 25678889997 89999977766 899999999998 99999988777
Q ss_pred ChHHH
Q 015899 273 PDLDI 277 (398)
Q Consensus 273 ~~~~L 277 (398)
.+.++
T Consensus 327 ~~P~l 331 (365)
T 2gou_A 327 ANPDL 331 (365)
T ss_dssp HCTTH
T ss_pred hCchH
Confidence 55444
No 341
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=92.95 E-value=0.38 Score=48.09 Aligned_cols=120 Identities=9% Similarity=-0.011 Sum_probs=87.9
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. .....|..+.- |-+. ..+..++++.+++.|...| |+.+-.++++.+..+|+. +++||
T Consensus 180 ~v~avR~a~--g~~~~l~vDaN------~~~~-~~~A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 245 (393)
T 4dwd_A 180 KARAVRELL--GPDAVIGFDAN------NGYS-VGGAIRVGRALEDLGYSWF----EEPVQHYHVGAMGEVAQR-LDITV 245 (393)
T ss_dssp HHHHHHHHH--CTTCCEEEECT------TCCC-HHHHHHHHHHHHHTTCSEE----ECCSCTTCHHHHHHHHHH-CSSEE
T ss_pred HHHHHHHHh--CCCCeEEEECC------CCCC-HHHHHHHHHHHHhhCCCEE----ECCCCcccHHHHHHHHhh-CCCCE
Confidence 345555542 12356776642 1121 2244567888999887665 455666799999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcCcCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEcCCH
Q 015899 243 LCKEFIVDAWQIYYARTKGADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHDE 298 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEVht~ 298 (398)
...+-+.+++++.++...|+|.|.+....... .+...+...|+..|+.++ +|+.
T Consensus 246 a~dE~~~~~~~~~~~i~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~--~h~~ 300 (393)
T 4dwd_A 246 SAGEQTYTLQALKDLILSGVRMVQPDIVKMGGITGMMQCAALAHAHGVEFV--PHQT 300 (393)
T ss_dssp EBCTTCCSHHHHHHHHHHTCCEECCCTTTTTHHHHHHHHHHHHHHHTCEEC--CCCC
T ss_pred EecCCcCCHHHHHHHHHcCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEe--ecCC
Confidence 99999999999999888889999998888764 457888899999999987 4544
No 342
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=92.92 E-value=0.087 Score=50.52 Aligned_cols=123 Identities=14% Similarity=0.142 Sum_probs=73.9
Q ss_pred HHHHHHHHcCcCEEEEeccC---CC------hHHHHHHHHHHHHcCC--cEEEEcCCH--HH-HHH----HhccCCCcEE
Q 015899 252 WQIYYARTKGADAVLLIAAV---LP------DLDIRYMTKICKLLGL--TALVEVHDE--RE-MDR----VLGIEGIELI 313 (398)
Q Consensus 252 ~QI~eAr~~GADaVLLiaai---L~------~~~L~~Li~~a~~LGL--~~LVEVht~--eE-l~r----Al~l~Ga~iI 313 (398)
+++.+|...|||.|-+..-+ ++ -+++..+.+.|+..|+ .+++|..-+ +| +.+ +.++ |+++|
T Consensus 89 ~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~ea-GADfV 167 (260)
T 1p1x_A 89 AETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKA-GADFI 167 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHT-TCSEE
T ss_pred HHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHh-CCCEE
Confidence 57888899999998664432 22 1346666666665454 448887522 33 323 3455 99998
Q ss_pred eeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCC----------EEEEccc
Q 015899 314 GINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVK----------AVLVGES 377 (398)
Q Consensus 314 GINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gad----------aVLVGea 377 (398)
=+.. .+.+-.-+++...-+.+.++.-. ....+.+-+.|||+|.+|+..+.++|++ ++-+|.|
T Consensus 168 KTST-Gf~~~gAt~e~v~lm~~~I~~~~-~g~~v~VKaaGGIrt~~~al~~i~aga~~lG~~w~~~~~~RiGtS 239 (260)
T 1p1x_A 168 KTST-GKVAVNATPESARIMMEVIRDMG-VEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGAS 239 (260)
T ss_dssp ECCC-SCSSCCCCHHHHHHHHHHHHHHT-CTTTCEEECBSSCCSHHHHHHHHHHHHHHHCTTSCSTTTBCEEES
T ss_pred EeCC-CCCCCCCCHHHHHHHHHHHHHhc-CCCCceEEEeCCCCCHHHHHHHHHhhhhhccccccccCceEeecc
Confidence 7652 22222224443332322211000 1245789999999999999999999875 5666765
No 343
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=92.90 E-value=2.3 Score=39.85 Aligned_cols=176 Identities=21% Similarity=0.232 Sum_probs=91.4
Q ss_pred cHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcC--C-
Q 015899 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAG--V- 238 (398)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~--v- 238 (398)
.+...|++. ...||+.+|+. +|- -.+...++.+.+.||+.+-|.. + |+.+-++.+++.. .
T Consensus 50 ~~v~~L~~~-----g~~iflDlK~~-----DI~--nTv~~~~~~~~~~gad~vTvh~----~-~G~~~~~~a~~~~~~~~ 112 (239)
T 3tr2_A 50 AFVEELMQK-----GYRIFLDLKFY-----DIP--QTVAGACRAVAELGVWMMNIHI----S-GGRTMMETVVNALQSIT 112 (239)
T ss_dssp HHHHHHHHT-----TCCEEEEEEEC-----SCH--HHHHHHHHHHHHTTCSEEEEEG----G-GCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhc-----CCCEEEEeccc-----ccc--hHHHHHHHHHHhCCCCEEEEec----c-CCHHHHHHHHHHHHhcC
Confidence 355666642 24799999985 221 1344456788899999999954 4 4566777665430 1
Q ss_pred --CCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcE--E-
Q 015899 239 --KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIEL--I- 313 (398)
Q Consensus 239 --~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~i--I- 313 (398)
.-|.+.-=++++...=......|.+ .-+ .+...++.+.++..|++-+|.- ..|+...-+..|.++ |
T Consensus 113 ~~~~~~l~~Vt~LTS~~~~~l~~~g~~------~~~-~~~v~~~A~~a~~~g~~GvV~s--~~e~~~ir~~~~~~fl~vt 183 (239)
T 3tr2_A 113 LKEKPLLIGVTILTSLDGSDLKTLGIQ------EKV-PDIVCRMATLAKSAGLDGVVCS--AQEAALLRKQFDRNFLLVT 183 (239)
T ss_dssp CSSCCEEEEECSCTTCCHHHHHHTTCC------SCH-HHHHHHHHHHHHHHTCCEEECC--HHHHHHHHTTCCTTSEEEE
T ss_pred cCCCceEEEEEEEeeCCHHHHHhcCCC------CCH-HHHHHHHHHHHHHcCCCEEEEC--chhHHHHHHhcCCCcEEEC
Confidence 1232211122111100011123422 001 1234445555666777766633 444444333223222 1
Q ss_pred -eeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015899 314 -GINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 392 (398)
Q Consensus 314 -GINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 392 (398)
||.. .. ..+ ++ -..|.||.++ .++|+|-++||.+|++++||.++++++.
T Consensus 184 PGIr~---~g--------~~~-----~d-----------Q~rv~t~~~~---~~aGad~lVvGr~I~~a~dp~~a~~~i~ 233 (239)
T 3tr2_A 184 PGIRL---ET--------DEK-----GD-----------QKRVMTPRAA---IQAGSDYLVIGRPITQSTDPLKALEAID 233 (239)
T ss_dssp CCBC-------------------------------------CCBCHHHH---HHHTCSEEEECHHHHTSSSHHHHHHHHH
T ss_pred CCcCC---CC--------CCc-----Cc-----------ccccCCHHHH---HHcCCCEEEEChHHhCCCCHHHHHHHHH
Confidence 2220 00 000 00 0013455554 4689999999999999999999998875
Q ss_pred c
Q 015899 393 G 393 (398)
Q Consensus 393 ~ 393 (398)
.
T Consensus 234 ~ 234 (239)
T 3tr2_A 234 K 234 (239)
T ss_dssp H
T ss_pred H
Confidence 4
No 344
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=92.87 E-value=0.37 Score=47.15 Aligned_cols=93 Identities=11% Similarity=0.115 Sum_probs=74.6
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DL 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~ 275 (398)
+..++++.+++.|...| |+.+-..+++.++.+++. +++||...+-+.++.++.++...| +|.|.+...... -.
T Consensus 203 ~a~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 277 (370)
T 1nu5_A 203 TASIWIPRLEEAGVELV----EQPVPRANFGALRRLTEQ-NGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIA 277 (370)
T ss_dssp HHHHHHHHHHHHTCCEE----ECCSCTTCHHHHHHHHHH-CSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHH
T ss_pred HHHHHHHHHHhcCcceE----eCCCCcccHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHH
Confidence 45567888888887654 444556789999999987 899999999999999999988776 899998776653 34
Q ss_pred HHHHHHHHHHHcCCcEEEEc
Q 015899 276 DIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEV 295 (398)
+..++.+.|+..|+.+++-+
T Consensus 278 ~~~~i~~~A~~~g~~~~~~~ 297 (370)
T 1nu5_A 278 NTLKVAAVAEAAGISSYGGT 297 (370)
T ss_dssp HHHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHHHHcCCcEEecC
Confidence 57888899999999988654
No 345
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=92.83 E-value=7.3 Score=37.71 Aligned_cols=167 Identities=16% Similarity=0.163 Sum_probs=98.8
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHH-HHHHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFE-NLEAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~e-dL~~I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++++.+.+.|+++|-|+ |--+++.=+.+ ..+.+ ++. .-.+||+..=.-.+.. ....|..+|||+|+++.
T Consensus 35 ~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 114 (318)
T 3qfe_A 35 ERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLP 114 (318)
T ss_dssp HHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 455677788999999987 22222222333 32322 222 2368999754433443 24456688999999988
Q ss_pred cC-C----ChHH-HHHHHHHHHHcCCcEEEE--------c-CCHHHHHHHhc-cCCCcEEeeccccCcccccChhhHHHH
Q 015899 270 AV-L----PDLD-IRYMTKICKLLGLTALVE--------V-HDEREMDRVLG-IEGIELIGINNRNLETFEVDNSNTKKL 333 (398)
Q Consensus 270 ai-L----~~~~-L~~Li~~a~~LGL~~LVE--------V-ht~eEl~rAl~-l~Ga~iIGINnRdL~tf~vDl~~t~~L 333 (398)
-. . +++. .+++-..|...++.+++= + =+.+.+.+..+ . ..++||-.. .-|+....++
T Consensus 115 P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~--pnIvgiKds-----sgd~~~~~~~ 187 (318)
T 3qfe_A 115 PAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKN--PNVVGVKLT-----CASVGKITRL 187 (318)
T ss_dssp CCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHHHC--TTEEEEEES-----SCCHHHHHHH
T ss_pred CcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhC--CCEEEEEeC-----CCCHHHHHHH
Confidence 73 2 3444 555556677777777432 1 14566666555 4 479999732 3477777777
Q ss_pred hhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 334 LEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 334 ~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
+... .+.+..+.+ |-. +.+...+.+|++|++-|.+=+-++
T Consensus 188 ~~~~-----~~~~f~v~~--G~d--~~~l~~l~~G~~G~is~~an~~P~ 227 (318)
T 3qfe_A 188 AATL-----PPAAFSVFG--GQS--DFLIGGLSVGSAGCIAAFANVFPK 227 (318)
T ss_dssp HHHS-----CGGGCEEEE--SCG--GGHHHHHHTTCCEEECGGGGTCHH
T ss_pred HHhc-----CCCCEEEEE--ecH--HHHHHHHHCCCCEEEecHHHhhHH
Confidence 6642 123444443 332 234566789999999887755443
No 346
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=92.80 E-value=0.2 Score=47.16 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=54.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEec----c--CCcCCCCHHHHHHHHhcC-CCCcEEeccccCCHHHHHHHHHcCcCEEEEec
Q 015899 197 FDPVEIARSYEKGGAACLSILT----D--EKYFKGSFENLEAVRSAG-VKCPLLCKEFIVDAWQIYYARTKGADAVLLIA 269 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLT----d--~~~F~Gs~edL~~Ir~a~-v~lPVL~KDFIid~~QI~eAr~~GADaVLLia 269 (398)
.++.++. ...+.||+.|.+-. . +.+..-+++.++.+++.. +++||+.=..| ++..+.+++.+|||+|.++.
T Consensus 143 ht~~Ea~-~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~s 220 (243)
T 3o63_A 143 HDPDQVA-AAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVR 220 (243)
T ss_dssp CSHHHHH-HHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESH
T ss_pred CCHHHHH-HHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeH
Confidence 4676644 44557999999832 1 112233678888888641 48999988776 88899999999999999999
Q ss_pred cCCC
Q 015899 270 AVLP 273 (398)
Q Consensus 270 aiL~ 273 (398)
+++.
T Consensus 221 ai~~ 224 (243)
T 3o63_A 221 AITS 224 (243)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 8875
No 347
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=92.71 E-value=7 Score=37.17 Aligned_cols=166 Identities=16% Similarity=0.149 Sum_probs=100.0
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHHHHHHH----Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFENLEAV----RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL~~I----r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++.+.+.+.|+++|-++ |--+++.=+.+.-.++ .+. .-.+||+..=.-.+.. +...|..+|||+|+++.
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 25 EKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 345667788999999886 2222222234333333 222 2368999754433443 24456788999999987
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEEc--------CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGE 337 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVEV--------ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i 337 (398)
-.. +++. .+++-..+...++.+++=- =+.+.+.+..+. ..++||-.. .-|+....+++...
T Consensus 105 P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgiK~s-----sgd~~~~~~~~~~~ 177 (291)
T 3tak_A 105 PYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEI--PNIVGIKDA-----TGDVPRGKALIDAL 177 (291)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTTS--TTEEEEEEC-----SCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHHcC--CCEEEEEeC-----CCCHHHHHHHHHHc
Confidence 653 4444 4555556667788876531 145566665554 579999732 34677777777642
Q ss_pred cccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 338 RGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 338 ~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
+.+..+. +|- -+.+.....+|++|++-|.+=+-++
T Consensus 178 ------~~~f~v~--~G~--d~~~~~~l~~G~~G~is~~~n~~P~ 212 (291)
T 3tak_A 178 ------NGKMAVY--SGD--DETAWELMLLGADGNISVTANIAPK 212 (291)
T ss_dssp ------TTSSEEE--ECC--HHHHHHHHHTTCCEEEESGGGTCHH
T ss_pred ------CCCeEEE--ECc--HHHHHHHHHCCCCEEEechhhhcHH
Confidence 2344443 333 2335566789999999887755443
No 348
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=92.63 E-value=0.45 Score=47.33 Aligned_cols=117 Identities=10% Similarity=0.048 Sum_probs=85.7
Q ss_pred HHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHH-hcCCCCcE
Q 015899 164 IGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVR-SAGVKCPL 242 (398)
Q Consensus 164 ~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir-~a~v~lPV 242 (398)
..++++.. .....|..+.- .| +. ..+..++++.+++.|...| |+.+-..+++.+..+| +. +++||
T Consensus 185 v~avR~a~--g~d~~l~vDan-----~~-~~-~~~A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~~-~~iPI 250 (389)
T 3ozy_A 185 LRAMRQRV--GADVEILVDAN-----QS-LG-RHDALAMLRILDEAGCYWF----EEPLSIDDIEGHRILRAQG-TPVRI 250 (389)
T ss_dssp HHHHHHHH--CTTSEEEEECT-----TC-CC-HHHHHHHHHHHHHTTCSEE----ESCSCTTCHHHHHHHHTTC-CSSEE
T ss_pred HHHHHHHc--CCCceEEEECC-----CC-cC-HHHHHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHhcC-CCCCE
Confidence 44555542 12356776642 12 21 2244567889999997776 4556667899999999 86 89999
Q ss_pred EeccccCCHHHHHHHHHc-CcCEEEEeccCCC-hHHHHHHHHHHHHcCCcEEEE
Q 015899 243 LCKEFIVDAWQIYYARTK-GADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~-GADaVLLiaaiL~-~~~L~~Li~~a~~LGL~~LVE 294 (398)
...+-+.++++..++... ++|.|.+...... -.+...+...|+..|+.+++-
T Consensus 251 a~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h 304 (389)
T 3ozy_A 251 ATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWNPH 304 (389)
T ss_dssp EECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECCC
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 999999999998888766 4899999888775 456888999999999998744
No 349
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=92.62 E-value=0.65 Score=45.38 Aligned_cols=120 Identities=13% Similarity=0.094 Sum_probs=87.0
Q ss_pred cHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCc
Q 015899 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP 241 (398)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lP 241 (398)
....++++.. .....+....- |-+.. .+ .++++.+++.|...| |+.+-..+++.+..+++. +++|
T Consensus 171 e~v~avr~~~--g~~~~l~vDan------~~~~~-~~-~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~ip 235 (368)
T 1sjd_A 171 EPVRAVRERF--GDDVLLQVDAN------TAYTL-GD-APQLARLDPFGLLLI----EQPLEEEDVLGHAELARR-IQTP 235 (368)
T ss_dssp HHHHHHHHHH--CTTSEEEEECT------TCCCG-GG-HHHHHTTGGGCCSEE----ECCSCTTCHHHHHHHHTT-CSSC
T ss_pred HHHHHHHHhc--CCCceEEEecc------CCCCH-HH-HHHHHHHHhcCCCeE----eCCCChhhHHHHHHHHHh-CCCC
Confidence 3455555543 12355665542 22332 34 778888888887654 444566789999999986 8999
Q ss_pred EEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEcC
Q 015899 242 LLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVH 296 (398)
Q Consensus 242 VL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEVh 296 (398)
|...+-+.++.++.++...| +|.|.+....... .+..++.+.|+..|+.+++-..
T Consensus 236 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~ 292 (368)
T 1sjd_A 236 ICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWCGGM 292 (368)
T ss_dssp EEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCC
T ss_pred EEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEeCCc
Confidence 99999999999999988776 7999998877743 5578899999999999876543
No 350
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=92.59 E-value=3.3 Score=39.74 Aligned_cols=167 Identities=13% Similarity=0.111 Sum_probs=98.1
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHHHH-HHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFENL-EAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL-~~I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++++.+.+.|+++|-++ |--+++.=+.+.- +.+ ++. .-.+||+..=.-.+.. ....|..+|||+|+++.
T Consensus 28 ~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (300)
T 3eb2_A 28 GRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAIL 107 (300)
T ss_dssp HHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 345667788999998776 2222222233332 222 222 2368999643323333 34466788999999987
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEEc--------CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGE 337 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVEV--------ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i 337 (398)
-.. +++. .+++-..|...++.+++=- =+.+.+.+..+. ..++||-.. .-|+....+++...
T Consensus 108 P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiKds-----sgd~~~~~~~~~~~ 180 (300)
T 3eb2_A 108 EAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEH--PRIRYIKDA-----STNTGRLLSIINRC 180 (300)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHTS--TTEEEEEEC-----SSBHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHHcC--CCEEEEEcC-----CCCHHHHHHHHHHc
Confidence 754 4545 4555566677788775421 145566665554 579999732 34667777776642
Q ss_pred cccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015899 338 RGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 338 ~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
+.+..+.+ |-.. .+...+.+|++|++-|.+=+-++-
T Consensus 181 ------~~~f~v~~--G~d~--~~~~~l~~G~~G~is~~an~~P~~ 216 (300)
T 3eb2_A 181 ------GDALQVFS--ASAH--IPAAVMLIGGVGWMAGPACIAPRQ 216 (300)
T ss_dssp ------GGGSEEEE--CTTS--CHHHHHHTTCCEEEEGGGGTCHHH
T ss_pred ------CCCeEEEe--CcHH--HHHHHHhCCCCEEEeChhhhhHHH
Confidence 23444443 3322 244566789999999987654443
No 351
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=92.52 E-value=2.1 Score=41.89 Aligned_cols=125 Identities=19% Similarity=0.155 Sum_probs=83.8
Q ss_pred CCceEEEEeccCCCC---CC---CCCCC-CCHHHHHHHHHHcCCcEEEEec---cCCcCCCCHH----HHHHHHhcCCCC
Q 015899 175 GLPALIAEVKKASPS---RG---ILRED-FDPVEIARSYEKGGAACLSILT---DEKYFKGSFE----NLEAVRSAGVKC 240 (398)
Q Consensus 175 ~~~~vIAEvKraSPS---kG---~i~~~-~dp~~iA~aY~~~GA~aISVLT---d~~~F~Gs~e----dL~~Ir~a~v~l 240 (398)
+++.|+.||--..|- .| ..... ..+.+.|+.+.+.||+.|-|.. +|+.+.=+.+ -++.+++. +++
T Consensus 45 ~~p~i~m~I~n~tpdsf~d~i~~~~~~~~~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~-~~v 123 (310)
T 2h9a_B 45 NPPRFALEVFDTPPTDWPDILVEPFKDVINDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADA-IDV 123 (310)
T ss_dssp SCCEEEEEEESSCCSSCCHHHHGGGTTTTTCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHH-CSS
T ss_pred CCCeEEEEEeeCCCcccchhhhhhhccHHHHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHh-CCc
Confidence 456789999999882 34 33322 4899999999999999999984 5655544444 44455665 799
Q ss_pred cEEeccccC---CHHHHHHHHHcCcC--EEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC-CHHHHHH
Q 015899 241 PLLCKEFIV---DAWQIYYARTKGAD--AVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH-DEREMDR 303 (398)
Q Consensus 241 PVL~KDFIi---d~~QI~eAr~~GAD--aVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh-t~eEl~r 303 (398)
||---|-.- ++.-+.+|..+||+ .++-.++.. ...++...+.+.|..+++-.. |.+.+.+
T Consensus 124 plsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~---~~~~~~~~aa~~g~~vv~m~~~dv~~l~~ 189 (310)
T 2h9a_B 124 PLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKD---NYKPIVATCMVHGHSVVASAPLDINLSKQ 189 (310)
T ss_dssp CEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTT---THHHHHHHHHHHTCEEEEECSSCHHHHHH
T ss_pred eEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCC---ccHHHHHHHHHhCCCEEEEChhHHHHHHH
Confidence 986434111 23346677889998 555555554 356788888889988777543 4554443
No 352
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=92.50 E-value=7.1 Score=37.51 Aligned_cols=165 Identities=18% Similarity=0.151 Sum_probs=97.0
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHHH-HHHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFEN-LEAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~ed-L~~I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++++.+.+.|+++|-++ |--+++.=+.+. .+.+ ++. .-.+||+..=.-.+.. +...|..+|||+|++..
T Consensus 36 ~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~ 115 (306)
T 1o5k_A 36 ERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVT 115 (306)
T ss_dssp HHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECC
Confidence 355667789999999886 222222223332 2222 322 2368999654433433 34456678999999988
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEEc--------CCHHHHHHHh-ccCCCcEEeeccccCcccccChhhHHHHhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVEV--------HDEREMDRVL-GIEGIELIGINNRNLETFEVDNSNTKKLLEG 336 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVEV--------ht~eEl~rAl-~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~ 336 (398)
-.. +++. .+++-..|...++.+++=- =+.+.+.+.. +. ..++||-.. .-|+....+++..
T Consensus 116 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pnIvgiKds-----sgd~~~~~~~~~~ 188 (306)
T 1o5k_A 116 PYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAADL--KNVVGIXEA-----NPDIDQIDRTVSL 188 (306)
T ss_dssp CCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHHC--TTEEEEEEC-----CCCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHhC--CCEEEEeCC-----CCCHHHHHHHHHh
Confidence 764 4444 4444455666778776521 1456666655 43 579999732 2466677777654
Q ss_pred hcccccccC---CceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 337 ERGEIIRQK---NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 337 i~~~~i~~~---~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
. +. +..+. +|-. +.+.....+|++|++-|.+=+-+
T Consensus 189 ~------~~~~~~f~v~--~G~d--~~~l~~l~~G~~G~is~~an~~P 226 (306)
T 1o5k_A 189 T------KQARSDFMVW--SGND--DRTFYLLCAGGDGVISVVSNVAP 226 (306)
T ss_dssp H------HHHCTTCEEE--ESSG--GGHHHHHHHTCCEEEESGGGTCH
T ss_pred c------CCCCCcEEEE--ECcH--HHHHHHHHCCCCEEEecHHHhhH
Confidence 2 12 44443 3432 23555667899999998775543
No 353
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=92.47 E-value=6.1 Score=37.61 Aligned_cols=165 Identities=12% Similarity=0.093 Sum_probs=96.1
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHH-HHHHH---Hhc-CCCCcEEeccccCCHH-HHH---HHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFE-NLEAV---RSA-GVKCPLLCKEFIVDAW-QIY---YARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~e-dL~~I---r~a-~v~lPVL~KDFIid~~-QI~---eAr~~GADaVLLia 269 (398)
.++++.+.+.|+++|-++ |--+++.=+.+ ..+.+ ++. .-.+||+..=.-.+.. .|. .|..+|||+|++..
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (292)
T 2ojp_A 25 KKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVT 104 (292)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECC
Confidence 455677788999999987 22222222333 32222 322 2368999654433433 233 44568999999988
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEEc--------CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGE 337 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVEV--------ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i 337 (398)
-.. +++. .+++-..|...++.+++=- =+.+.+.+..+. ..++||-. -.-|+....+++...
T Consensus 105 P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgiK~-----s~gd~~~~~~~~~~~ 177 (292)
T 2ojp_A 105 PYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKV--KNIIGIXE-----ATGNLTRVNQIKELV 177 (292)
T ss_dssp CCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHTS--TTEEEC-C-----CSCCTHHHHHHHTTS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHcC--CCEEEEeC-----CCCCHHHHHHHHHhc
Confidence 754 4555 4444455666778776521 145666665554 57999863 224677777777642
Q ss_pred cccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 338 RGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 338 ~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
+.+..+. +|-. +.+.....+|++|++-|.+=+-+
T Consensus 178 ------~~~f~v~--~G~d--~~~~~~l~~G~~G~is~~~n~~P 211 (292)
T 2ojp_A 178 ------SDDFVLL--SGDD--ASALDFMQYGGHGVISVTANVAA 211 (292)
T ss_dssp ------CTTSBCE--ESCG--GGHHHHHHTTCCEEEESGGGTCH
T ss_pred ------CCCEEEE--ECcH--HHHHHHHHCCCcEEEeCHHHhhH
Confidence 2344443 3332 22445667999999998775543
No 354
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=92.44 E-value=0.3 Score=46.17 Aligned_cols=45 Identities=20% Similarity=0.125 Sum_probs=38.3
Q ss_pred HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCC
Q 015899 227 FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 227 ~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (398)
.+.++.+|+. +++||.....|-++.|+.++..+|||+|..+.++.
T Consensus 194 ~~~i~~lr~~-~~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~ 238 (268)
T 1qop_A 194 HHLIEKLKEY-HAAPALQGFGISSPEQVSAAVRAGAAGAISGSAIV 238 (268)
T ss_dssp HHHHHHHHHT-TCCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHhc-cCCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 6899999987 79998875444459999999999999999998875
No 355
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=92.42 E-value=0.35 Score=46.28 Aligned_cols=73 Identities=19% Similarity=0.081 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCC-------HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEecc
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGS-------FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs-------~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa 270 (398)
+...+.+....+ -.-|-+++-.+.+++. .+.++.+|+. +++||+..-.|-++.|+.++...|||+|+++.+
T Consensus 160 ~~eri~~i~~~~-~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~-~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSa 237 (267)
T 3vnd_A 160 DADTLKMVSEQG-EGYTYLLSRAGVTGTESKAGEPIENILTQLAEF-NAPPPLLGFGIAEPEQVRAAIKAGAAGAISGSA 237 (267)
T ss_dssp CHHHHHHHHHHC-CSCEEESCCCCCC--------CHHHHHHHHHTT-TCCCEEECSSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHhC-CCcEEEEecCCCCCCccCCcHHHHHHHHHHHHh-cCCCEEEECCcCCHHHHHHHHHcCCCEEEECHH
Confidence 345555555543 3334444444444432 3677888986 899999866666799999899999999999987
Q ss_pred CC
Q 015899 271 VL 272 (398)
Q Consensus 271 iL 272 (398)
+.
T Consensus 238 iv 239 (267)
T 3vnd_A 238 VV 239 (267)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 356
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=92.35 E-value=0.17 Score=50.54 Aligned_cols=79 Identities=19% Similarity=0.072 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHcCCcEEEEeccC--CcCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC
Q 015899 198 DPVEIARSYEKGGAACLSILTDE--KYFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP 273 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~--~~F~G-s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~ 273 (398)
+..++|+.+++.|++.|+|-.-. ..+.+ ..+.+..||+. +++||+.-..| ++.+..++...| ||.|.+.-.++.
T Consensus 256 ~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~-~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~ 333 (377)
T 2r14_A 256 MAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQR-FKGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIA 333 (377)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHH-CCCCEEEECCC-CHHHHHHHHHCCCceEEeecHHHHh
Confidence 46778999999999999996410 11111 45668889987 89999977666 799999999988 999999888776
Q ss_pred hHHHH
Q 015899 274 DLDIR 278 (398)
Q Consensus 274 ~~~L~ 278 (398)
+.++-
T Consensus 334 ~P~l~ 338 (377)
T 2r14_A 334 NPDLP 338 (377)
T ss_dssp CTTHH
T ss_pred CchHH
Confidence 55543
No 357
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=92.34 E-value=0.41 Score=47.53 Aligned_cols=96 Identities=16% Similarity=0.079 Sum_probs=75.4
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DL 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~ 275 (398)
+..++++.+++.|...| |+.+-..+++.+..+|+. +++||...+-+.++.++.++...| +|.|.+...... -.
T Consensus 222 ~a~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 296 (393)
T 2og9_A 222 TAQRMCRIFEPFNLVWI----EEPLDAYDHEGHAALALQ-FDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGIT 296 (393)
T ss_dssp HHHHHHHHHGGGCCSCE----ECCSCTTCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHH
T ss_pred HHHHHHHHHHhhCCCEE----ECCCCcccHHHHHHHHHh-CCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHH
Confidence 45567788888887755 445556789999999987 899999999999999999998776 899888766553 34
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCHHH
Q 015899 276 DIRYMTKICKLLGLTALVEVHDERE 300 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEVht~eE 300 (398)
+..++.+.|+..|+.++ +|...+
T Consensus 297 ~~~~i~~~A~~~gi~~~--~h~~~~ 319 (393)
T 2og9_A 297 PFLKIASLAEHAGLMLA--PHFAME 319 (393)
T ss_dssp HHHHHHHHHHHTTCEEC--CCSCHH
T ss_pred HHHHHHHHHHHcCCEEe--ccCccH
Confidence 57889999999999987 455444
No 358
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=92.34 E-value=0.19 Score=50.61 Aligned_cols=44 Identities=16% Similarity=0.051 Sum_probs=40.2
Q ss_pred CceEEEecCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHh
Q 015899 346 NIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITG 390 (398)
Q Consensus 346 ~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~ 390 (398)
++++|+-||| +++++.++.+.| ||+|.+|.+++..++....+++
T Consensus 319 ~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k~~~ 363 (402)
T 2hsa_B 319 QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKL 363 (402)
T ss_dssp SSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred CCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHhCchHHHHHHh
Confidence 5689999999 999999999998 9999999999999998887764
No 359
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=92.19 E-value=1 Score=44.49 Aligned_cols=88 Identities=13% Similarity=0.132 Sum_probs=69.3
Q ss_pred CHHHHHHHHHH--cCCcEEEEeccCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC
Q 015899 198 DPVEIARSYEK--GGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP 273 (398)
Q Consensus 198 dp~~iA~aY~~--~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~ 273 (398)
+..++++.+++ .|...| |+.+-..+++.+..+++. + ++||...+-+ +++++.++...| +|.|.+. =+
T Consensus 205 ~a~~~~~~l~~~g~~i~~i----EqP~~~~~~~~~~~l~~~-~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik---GG 275 (389)
T 2oz8_A 205 EALTKLVAIREAGHDLLWV----EDPILRHDHDGLRTLRHA-VTWTQINSGEYL-DLQGKRLLLEAHAADILNVH---GQ 275 (389)
T ss_dssp HHHHHHHHHHHTTCCCSEE----ESCBCTTCHHHHHHHHHH-CCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC---SC
T ss_pred HHHHHHHHHHhcCCCceEE----eCCCCCcCHHHHHHHHhh-CCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC---cC
Confidence 45577888888 554433 455666789999999987 8 8999999999 999999988776 7888887 22
Q ss_pred hHHHHHHHHHHHHcCCcEEEE
Q 015899 274 DLDIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 274 ~~~L~~Li~~a~~LGL~~LVE 294 (398)
-.+..++.+.|+..|+.+++-
T Consensus 276 it~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 276 VTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp HHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHHcCCeEeec
Confidence 245678888999999998877
No 360
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=92.11 E-value=1.7 Score=39.95 Aligned_cols=123 Identities=13% Similarity=0.121 Sum_probs=75.5
Q ss_pred HHHHHHhcCCCCcEEeccccCCHHH-HHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEE---cCCHHHHHHH
Q 015899 229 NLEAVRSAGVKCPLLCKEFIVDAWQ-IYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE---VHDEREMDRV 304 (398)
Q Consensus 229 dL~~Ir~a~v~lPVL~KDFIid~~Q-I~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVE---Vht~eEl~rA 304 (398)
.+..+++. -=+||++-+=.-+-.+ +..+...|++.|=+-..-.. .++.+-+.++.++ +.++. |.+.++++.|
T Consensus 9 ~~~~l~~~-~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~--~~~~i~~l~~~~~-~~~vgagtvi~~d~~~~A 84 (214)
T 1wbh_A 9 AESILTTG-PVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTEC--AVDAIRAIAKEVP-EAIVGAGTVLNPQQLAEV 84 (214)
T ss_dssp HHHHHHSC-SEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTT--HHHHHHHHHHHCT-TSEEEEESCCSHHHHHHH
T ss_pred HHHHHHHC-CEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChh--HHHHHHHHHHHCc-CCEEeeCEEEEHHHHHHH
Confidence 44556654 3478887653333344 44557889999888644332 2333333555653 22322 3678999999
Q ss_pred hccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEE
Q 015899 305 LGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLV 374 (398)
Q Consensus 305 l~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLV 374 (398)
+++ ||+.|-..+ .|.+.. +.... .++.++- |++|++++.++.++|+|.+-+
T Consensus 85 ~~a-GAd~v~~p~-------~d~~v~-~~~~~--------~g~~~i~--G~~t~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 85 TEA-GAQFAISPG-------LTEPLL-KAATE--------GTIPLIP--GISTVSELMLGMDYGLKEFKF 135 (214)
T ss_dssp HHH-TCSCEEESS-------CCHHHH-HHHHH--------SSSCEEE--EESSHHHHHHHHHTTCCEEEE
T ss_pred HHc-CCCEEEcCC-------CCHHHH-HHHHH--------hCCCEEE--ecCCHHHHHHHHHCCCCEEEE
Confidence 998 999775443 233332 22222 1333433 599999999999999999877
No 361
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=92.11 E-value=0.41 Score=47.79 Aligned_cols=72 Identities=24% Similarity=0.172 Sum_probs=53.5
Q ss_pred HHHHHHHHHcCCcEEEEeccC-----------------------CcCC--C--CHHHHHHHHhcCC-CCcEEeccccCCH
Q 015899 200 VEIARSYEKGGAACLSILTDE-----------------------KYFK--G--SFENLEAVRSAGV-KCPLLCKEFIVDA 251 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVLTd~-----------------------~~F~--G--s~edL~~Ir~a~v-~lPVL~KDFIid~ 251 (398)
.+.|+..+++||++|.|--=. .+|. | ...-|..++++ + ++||+.-..|.++
T Consensus 201 ~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~-~~~ipvia~GGI~~~ 279 (368)
T 3vkj_A 201 METAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYS-VPDSFLVGSGGIRSG 279 (368)
T ss_dssp HHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHH-STTCEEEEESSCCSH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHH-cCCCcEEEECCCCCH
Confidence 468999999999999882100 0111 1 11345666665 5 5999999999999
Q ss_pred HHHHHHHHcCcCEEEEeccCC
Q 015899 252 WQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 252 ~QI~eAr~~GADaVLLiaaiL 272 (398)
.++.++.++|||+|.+....|
T Consensus 280 ~d~~kal~lGA~~v~ig~~~l 300 (368)
T 3vkj_A 280 LDAAKAIALGADIAGMALPVL 300 (368)
T ss_dssp HHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHHHHcCCCEEEEcHHHH
Confidence 999999999999999987655
No 362
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=92.08 E-value=5.4 Score=38.35 Aligned_cols=161 Identities=12% Similarity=0.098 Sum_probs=95.4
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHHHHHHH----Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFENLEAV----RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL~~I----r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++.+.+.+.|+++|-++ |--+++.=+.+.-..+ ++. .-.+||+..=.-.+.. +...|..+|||+|+++.
T Consensus 39 ~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 39 ARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 345667778999999887 2222222233333222 222 2368999754333333 34466788999999987
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEEc--------CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGE 337 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVEV--------ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i 337 (398)
-.. +++. .+++-..|...++.+++=- =+.+.+.+..+. ..++||-.. .-|+....+++..
T Consensus 119 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiKds-----sgd~~~~~~~~~~- 190 (304)
T 3l21_A 119 PYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASH--PNIVGVXDA-----KADLHSGAQIMAD- 190 (304)
T ss_dssp CCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHTS--TTEEEEEEC-----SCCHHHHHHHHHH-
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcC--CCEEEEECC-----CCCHHHHHHHhcC-
Confidence 653 4444 4444455666788876531 145666665554 579999732 2367776776531
Q ss_pred cccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccccc
Q 015899 338 RGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIV 379 (398)
Q Consensus 338 ~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLm 379 (398)
.+..+. +|-. +.+.....+|++|++-|.+=+
T Consensus 191 -------~~f~v~--~G~d--~~~l~~l~~Ga~G~is~~~n~ 221 (304)
T 3l21_A 191 -------TGLAYY--SGDD--ALNLPWLRMGATGFISVIAHL 221 (304)
T ss_dssp -------HCCEEE--ESSG--GGHHHHHHHTCCEEEESTHHH
T ss_pred -------CCeEEE--eCch--HHHHHHHHcCCCEEEecHHhh
Confidence 344443 4432 334566779999998876543
No 363
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=92.06 E-value=6 Score=37.63 Aligned_cols=165 Identities=12% Similarity=0.077 Sum_probs=96.6
Q ss_pred HHHHHHHHHHcCCcEEEEe-ccCCcCCCCH-HHHHHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEe
Q 015899 199 PVEIARSYEKGGAACLSIL-TDEKYFKGSF-ENLEAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLI 268 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVL-Td~~~F~Gs~-edL~~I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLi 268 (398)
..++++.+.+.|+++|-++ |--+++.=+. |..+.+ ++. .-.+||+..=.-.+.. +...|..+|||+|++.
T Consensus 24 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~ 103 (291)
T 3a5f_A 24 LSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVI 103 (291)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEc
Confidence 3456677889999999887 2222222233 333322 222 2368999654433433 3445678899999998
Q ss_pred ccCC---ChHHHH-HHHHHHHHcCCcEEEE-------c-CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhh
Q 015899 269 AAVL---PDLDIR-YMTKICKLLGLTALVE-------V-HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEG 336 (398)
Q Consensus 269 aaiL---~~~~L~-~Li~~a~~LGL~~LVE-------V-ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~ 336 (398)
.-.. +++.+. ++-..|...++.+++= + -+.+.+.+..+. ..++||-. -.-|+....+++..
T Consensus 104 ~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgiK~-----s~gd~~~~~~~~~~ 176 (291)
T 3a5f_A 104 TPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCED--KNIVAVXE-----ASGNISQIAQIKAL 176 (291)
T ss_dssp CCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTTS--TTEEEEEE-----CSCCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcC--CCEEEEeC-----CCCCHHHHHHHHHh
Confidence 8764 444433 3334455667877652 1 155666665554 57999972 23467777777664
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 380 (398)
. +.+..+. +|-. +.+.....+|++|++-|.+=+-
T Consensus 177 ~------~~~f~v~--~G~d--~~~~~~l~~G~~G~is~~an~~ 210 (291)
T 3a5f_A 177 C------GDKLDIY--SGND--DQIIPILALGGIGVISVLANVI 210 (291)
T ss_dssp H------GGGSEEE--ESCG--GGHHHHHHTTCCEEEESGGGTC
T ss_pred c------CCCeEEE--eCcH--HHHHHHHHCCCCEEEecHHHhc
Confidence 2 2344443 3432 2244566799999999887554
No 364
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=92.03 E-value=0.47 Score=47.17 Aligned_cols=92 Identities=10% Similarity=0.071 Sum_probs=73.9
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHh-cCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-h
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRS-AGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-D 274 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~-a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~ 274 (398)
+..++++.+++.|...| |+.+-..+++.+..+++ . +++||...+-+.++.++.++...| +|.|.+...... -
T Consensus 210 ~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 284 (401)
T 2hzg_A 210 AAAARLPTLDAAGVLWL----EEPFDAGALAAHAALAGRG-ARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGL 284 (401)
T ss_dssp HHHTTHHHHHHTTCSEE----ECCSCTTCHHHHHHHHTTC-CSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTSH
T ss_pred HHHHHHHHHHhcCCCEE----ECCCCccCHHHHHHHHhhC-CCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCCH
Confidence 44567888999888765 45556678999999998 7 899999999999999998887665 899999776653 3
Q ss_pred HHHHHHHHHHHHcCCcEEEE
Q 015899 275 LDIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 275 ~~L~~Li~~a~~LGL~~LVE 294 (398)
.+..++.+.|+..|+.++.-
T Consensus 285 t~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 285 GPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp HHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHcCCEEecC
Confidence 45778889999999997743
No 365
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=92.00 E-value=7 Score=35.99 Aligned_cols=127 Identities=18% Similarity=0.098 Sum_probs=83.4
Q ss_pred CceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCC-CCHHHHHHHHhcCCCCcE--Ee-ccccCCH
Q 015899 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFK-GSFENLEAVRSAGVKCPL--LC-KEFIVDA 251 (398)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~-Gs~edL~~Ir~a~v~lPV--L~-KDFIid~ 251 (398)
+..+..|+|...... ........+++...+.|.. +.-.|+ =+.+.|..+|+...++|+ |. .....++
T Consensus 108 ~~~l~iEiK~~~~~~---~~~~~~~~v~~~l~~~~~~------~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~ 178 (258)
T 2o55_A 108 NLKLNLELKGEEWKR---KESGDHQRLLLLVEKYHMQ------ERVDYCSFHHEALAHLKALCPDVKITYLFNYMGQPTP 178 (258)
T ss_dssp CCEEEEEECCSSSSS---TTSSHHHHHHHHHHTTTCG------GGEEEEESSHHHHHHHHHHCTTCEEEEECCTTSCCCC
T ss_pred ceEEEEEEccCCccc---cchHHHHHHHHHHHHcCCC------CCEEEEeCCHHHHHHHHHHCCCCcEEEEEeCCCCCCH
Confidence 578999999654210 1112234567777776643 111111 257788888875345664 33 3333344
Q ss_pred HHH-HHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEc-----CCHHHHHHHhccCCCcEEeec
Q 015899 252 WQI-YYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEV-----HDEREMDRVLGIEGIELIGIN 316 (398)
Q Consensus 252 ~QI-~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEV-----ht~eEl~rAl~l~Ga~iIGIN 316 (398)
++. ..+...|++.|.+....++ .++++.++..|+.+++=+ .+.+++.+.+++ |++.|-++
T Consensus 179 ~~~~~~~~~~~~~~v~~~~~~~~----~~~v~~~~~~G~~v~~wTv~~~~n~~~~~~~l~~~-GvdgI~TD 244 (258)
T 2o55_A 179 LDFVEQACYGDANGVSMLFHYLT----KEQVCTAHEKGLSVTVWMPWIFDDSEEDWKKCLEL-QVDLICSN 244 (258)
T ss_dssp TTHHHHHHHTTCSEEEEEGGGCC----HHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHH-TCSEEEES
T ss_pred HHHHHHHHhcCCeEEecChhhcC----HHHHHHHHHCCCEEEEeeCCCCCCCHHHHHHHHHc-CCCEEEeC
Confidence 433 3367889999998877776 457888999999996654 589999999997 99988776
No 366
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=91.98 E-value=8.9 Score=36.77 Aligned_cols=162 Identities=12% Similarity=0.079 Sum_probs=96.0
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHHHH-HHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFENL-EAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL-~~I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++++.+.+.|+++|-|+ |--+++.=+.+.- +.+ ++. .-.+||+..=.-.+.. +...|..+|||+|++..
T Consensus 35 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 35 RRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecC
Confidence 456677889999999987 2222222233332 222 322 2368999644333333 23456678999999988
Q ss_pred cCC---ChHH-HHHHHHHHHHcC-CcEEE-Ec-------CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLG-LTALV-EV-------HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEG 336 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LG-L~~LV-EV-------ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~ 336 (398)
-.. +++. .+++-..|...+ +.+++ .+ =+.+.+.+..+. ..++||-.. .-|+....+++..
T Consensus 115 P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiK~s-----~gd~~~~~~~~~~ 187 (303)
T 2wkj_A 115 PFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTL--PGVGALXQT-----SGDLYQMEQIRRE 187 (303)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHTS--TTEEEEEEC-----CCCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhcC--CCEEEEeCC-----CCCHHHHHHHHHh
Confidence 754 4555 445555666677 88765 21 155666666554 579999732 2366666777653
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccccc
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIV 379 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLm 379 (398)
..+..+.+ |-. +.+.....+|++|++-|.+=+
T Consensus 188 -------~~~f~v~~--G~d--~~~~~~l~~G~~G~is~~an~ 219 (303)
T 2wkj_A 188 -------HPDLVLYN--GYD--NIFASGLLAGADGGIGSTYNI 219 (303)
T ss_dssp -------CTTCEEEE--CCG--GGHHHHHHHTCCEEEETTHHH
T ss_pred -------CCCeEEEe--CcH--HHHHHHHHCCCCEEEeCHHHh
Confidence 12444433 322 235556678999999986643
No 367
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=91.98 E-value=8.9 Score=36.69 Aligned_cols=166 Identities=14% Similarity=0.121 Sum_probs=99.3
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHHHHHH-H---Hhc-CC-CCcEEeccccCCHH----HHHHHHHcCcCEEEEe
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFENLEA-V---RSA-GV-KCPLLCKEFIVDAW----QIYYARTKGADAVLLI 268 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL~~-I---r~a-~v-~lPVL~KDFIid~~----QI~eAr~~GADaVLLi 268 (398)
.++.+.+.+.|+++|-++ |--+++.=+.+.-.. + .+. .- .+||+..=.-.+.. +...|..+|||+|+++
T Consensus 31 ~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 110 (301)
T 3m5v_A 31 ARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSV 110 (301)
T ss_dssp HHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 345667789999999886 222222223433222 2 222 23 68999754433443 2446678999999998
Q ss_pred ccCC---ChHH-HHHHHHHHHHcCCcEEEEc--------CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhh
Q 015899 269 AAVL---PDLD-IRYMTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEG 336 (398)
Q Consensus 269 aaiL---~~~~-L~~Li~~a~~LGL~~LVEV--------ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~ 336 (398)
.-.. +++. .+++-..|...++.+++=- =+.+.+.+..+. -..++||-.. .-|+....+++..
T Consensus 111 ~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~-~pnivgiKds-----sgd~~~~~~~~~~ 184 (301)
T 3m5v_A 111 APYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRD-CENIYGVKEA-----SGNIDKCVDLLAH 184 (301)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHH-CTTEEEEEEC-----SSCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhc-CCCEEEEEeC-----CCCHHHHHHHHHh
Confidence 7653 4444 4555556667788776421 145566665553 2579999732 3477777777764
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
. .+..+. +|-. +.+.....+|++|++-|.+=+-++
T Consensus 185 -----~--~~f~v~--~G~d--~~~~~~l~~G~~G~is~~~n~~P~ 219 (301)
T 3m5v_A 185 -----E--PRMMLI--SGED--AINYPILSNGGKGVISVTSNLLPD 219 (301)
T ss_dssp -----C--TTSEEE--ECCG--GGHHHHHHTTCCEEEESGGGTCHH
T ss_pred -----C--CCeEEE--EccH--HHHHHHHHcCCCEEEehHHHhhHH
Confidence 1 244443 3432 224556778999999887755443
No 368
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=91.98 E-value=0.45 Score=46.27 Aligned_cols=134 Identities=15% Similarity=0.193 Sum_probs=86.0
Q ss_pred CCccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCc--------EEEEeccCCcCCCCH-HH
Q 015899 159 PARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAA--------CLSILTDEKYFKGSF-EN 229 (398)
Q Consensus 159 ~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~--------aISVLTd~~~F~Gs~-ed 229 (398)
.++.|.++++. ....|+.-+|..|-- + -..+ .+..-||+. ++-+-..--.|-|+. +-
T Consensus 123 ~t~~~v~~~~g------~~~~i~dTRKT~Pgl---R---~l~k--yAV~~GGg~nHR~gL~d~vlikdNHi~~~G~i~~A 188 (287)
T 3tqv_A 123 VTNKLVKLISQ------YKTKLLDTRKTIPGF---R---LAQK--YAVRCGGGFNHRIGLFDAYLIKENHIRSAGGIAKA 188 (287)
T ss_dssp HHHHHHHHHTT------SSCEEECCSCCCTTC---H---HHHH--HHHHHTTCBCCCSSSSSSEEECTTTC----CHHHH
T ss_pred HHHHHHHHhCC------CCeEEEeecccCcch---H---HHHH--HHHHhcCchheeccCccEEEEeHHHHHHhCCHHHH
Confidence 35677777764 246788888888852 1 1112 233345652 333322222455665 45
Q ss_pred HHHHHhcCCCCcEE--eccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHHHH
Q 015899 230 LEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRV 304 (398)
Q Consensus 230 L~~Ir~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~rA 304 (398)
++.+|+.....||. +.. ..|+.+|..+|||.|+|+- .+++++++.++..+ =.+.+|++ |++.+...
T Consensus 189 v~~ar~~~~~~~IeVEv~t----l~ea~eAl~aGaD~I~LDn--~~~~~l~~av~~~~---~~v~ieaSGGIt~~~i~~~ 259 (287)
T 3tqv_A 189 VTKAKKLDSNKVVEVEVTN----LDELNQAIAAKADIVMLDN--FSGEDIDIAVSIAR---GKVALEVSGNIDRNSIVAI 259 (287)
T ss_dssp HHHHHHHCTTSCEEEEESS----HHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHHT---TTCEEEEESSCCTTTHHHH
T ss_pred HHHHHhhCCCCcEEEEeCC----HHHHHHHHHcCCCEEEEcC--CCHHHHHHHHHhhc---CCceEEEECCCCHHHHHHH
Confidence 66667653456665 444 3689999999999999987 77778888877653 25778886 88888888
Q ss_pred hccCCCcEEeec
Q 015899 305 LGIEGIELIGIN 316 (398)
Q Consensus 305 l~l~Ga~iIGIN 316 (398)
.+. |+++|++.
T Consensus 260 a~t-GVD~IsvG 270 (287)
T 3tqv_A 260 AKT-GVDFISVG 270 (287)
T ss_dssp HTT-TCSEEECS
T ss_pred HHc-CCCEEEEC
Confidence 886 99999996
No 369
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=91.97 E-value=0.2 Score=47.50 Aligned_cols=87 Identities=7% Similarity=-0.018 Sum_probs=65.5
Q ss_pred CCCHH-HHHHHHHHcCCcEEEEeccC---CcCCC-CHHHHHHHHhcCC----CCcEEeccccCCHHHHHHHHHc--CcCE
Q 015899 196 DFDPV-EIARSYEKGGAACLSILTDE---KYFKG-SFENLEAVRSAGV----KCPLLCKEFIVDAWQIYYARTK--GADA 264 (398)
Q Consensus 196 ~~dp~-~iA~aY~~~GA~aISVLTd~---~~F~G-s~edL~~Ir~a~v----~lPVL~KDFIid~~QI~eAr~~--GADa 264 (398)
..++. +.|+.|++. |..|-+ |+- +.+.| +++.++.+++. + ++||+.-..|-++.++.++... |||+
T Consensus 156 ~~~~~~e~a~~~~~~-a~~il~-t~i~~dG~~~G~d~eli~~l~~~-~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~g 232 (260)
T 2agk_A 156 DLELNADTFRELRKY-TNEFLI-HAADVEGLCGGIDELLVSKLFEW-TKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVD 232 (260)
T ss_dssp EEEESHHHHHHHTTT-CSEEEE-EC-------CCCCHHHHHHHHHH-HTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEE
T ss_pred CccHHHHHHHHHHHh-cCEEEE-EeeccccCcCCCCHHHHHHHHHh-hcccCCceEEEeCCCCCHHHHHHHHHhcCCCCE
Confidence 45788 999999999 998887 432 33334 67888888887 8 9999999999999999999887 9999
Q ss_pred EEEeccC--CCh--HHHHHHHHHHH
Q 015899 265 VLLIAAV--LPD--LDIRYMTKICK 285 (398)
Q Consensus 265 VLLiaai--L~~--~~L~~Li~~a~ 285 (398)
|++..++ ... -.+.++.++.+
T Consensus 233 vivg~al~l~~g~~~~~~~~~~~~~ 257 (260)
T 2agk_A 233 LTFGSSLDIFGGNLVKFEDCCRWNE 257 (260)
T ss_dssp EECCTTBGGGTCSSBCHHHHHHHHH
T ss_pred EEeeCCHHHcCCCCCCHHHHHHHHH
Confidence 9998875 332 23555555443
No 370
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=91.95 E-value=0.13 Score=49.05 Aligned_cols=166 Identities=14% Similarity=0.176 Sum_probs=86.8
Q ss_pred cEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE----eccccCCHH-HHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHH
Q 015899 212 ACLSILTDEKYFKGSFENLEAVRSAGVKCPLL----CKEFIVDAW-QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKL 286 (398)
Q Consensus 212 ~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL----~KDFIid~~-QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~ 286 (398)
.++=|-++ -|...+++-++.+|+. +.+|+ .-|..-+.. .+..+..+|||+|-+.+ ....+.++.+.+.++.
T Consensus 54 ~~~KvG~~-l~~~~G~~~v~~Lk~~--g~~VflDlK~~DIpnTv~~a~~~~~~~gaD~vTVh~-~~G~~~~~~a~~~~~~ 129 (255)
T 3ldv_A 54 CRLKVGKE-MFTLFGPDFVRELHKR--GFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHA-SGGERMMAASREILEP 129 (255)
T ss_dssp CEEEEEHH-HHHHHHHHHHHHHHHT--TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEG-GGCHHHHHHHHHHHGG
T ss_pred cEEEeCHH-HHHhhCHHHHHHHHhc--CCCEEEEEecccchhHHHHHHHHHHhcCCCEEEEec-cCCHHHHHHHHHHHhh
Confidence 34444332 2333457778888874 67877 245332322 34456678999998854 4555668888887764
Q ss_pred cC--------CcEEEEcCCHHHHHHHhccCCCcE-----E---e-e-ccccCcccccChhhHHHHhhhhcccccccCCce
Q 015899 287 LG--------LTALVEVHDEREMDRVLGIEGIEL-----I---G-I-NNRNLETFEVDNSNTKKLLEGERGEIIRQKNII 348 (398)
Q Consensus 287 LG--------L~~LVEVht~eEl~rAl~l~Ga~i-----I---G-I-NnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~ 348 (398)
.| +.+|... +.+++. ++ |..- + . . ....+..+.........+.+. .+.+.+
T Consensus 130 ~g~~~~~li~VtvLTS~-s~~~l~---~~-g~~~~~~~~V~~~A~~a~~aG~~GvV~sa~e~~~iR~~------~g~~fl 198 (255)
T 3ldv_A 130 YGKERPLLIGVTVLTSM-ESADLQ---GI-GILSAPQDHVLRLATLTKNAGLDGVVCSAQEASLLKQH------LGREFK 198 (255)
T ss_dssp GGGGSCEEEEECSCTTC-CHHHHH---HT-TCCSCHHHHHHHHHHHHHHTTCSEEECCHHHHHHHHHH------HCTTSE
T ss_pred cCCCCceEEEEEEEecC-CHHHHH---hc-CCCCCHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHHh------cCCCcE
Confidence 32 3333222 222332 11 1100 0 0 0 000111112222222333222 123433
Q ss_pred EEEecCCCCHH-H---------HHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 349 VVGESGLFTPD-D---------IAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 349 vVAESGI~t~e-D---------~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
+| --||.-.. + ...+.++|+|.++||.+|++++||.++++++..
T Consensus 199 ~V-tPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~ 252 (255)
T 3ldv_A 199 LV-TPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQAAHPEVVLEEINS 252 (255)
T ss_dssp EE-EECCCCTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHH
T ss_pred EE-eCCcccCcCCccceeccCCHHHHHHcCCCEEEECHHHhCCCCHHHHHHHHHH
Confidence 33 34443110 1 345668999999999999999999999988753
No 371
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=91.92 E-value=2.8 Score=39.79 Aligned_cols=165 Identities=15% Similarity=0.102 Sum_probs=100.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEec--cCCcCC---CCHHHHHHHHhcCCCCcE--EeccccCCHHHHHHHHHcCcCEEEEe
Q 015899 196 DFDPVEIARSYEKGGAACLSILT--DEKYFK---GSFENLEAVRSAGVKCPL--LCKEFIVDAWQIYYARTKGADAVLLI 268 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLT--d~~~F~---Gs~edL~~Ir~a~v~lPV--L~KDFIid~~QI~eAr~~GADaVLLi 268 (398)
..+..++++...+.|...|=+-+ .++|.. +..+.++.+++. .++|+ +. -....+..|..+|+|.|-+.
T Consensus 25 ~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~----~n~~~i~~a~~~G~~~V~i~ 99 (295)
T 1ydn_A 25 TADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLV----PNMKGYEAAAAAHADEIAVF 99 (295)
T ss_dssp HHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEEC----SSHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEe----CCHHHHHHHHHCCCCEEEEE
Confidence 34566789999999999887742 133322 233444444432 24555 33 35677889999999999887
Q ss_pred cc----------CCCh----HHHHHHHHHHHHcCCcEEEEc-----------CCHHHHHHHh----ccCCCcEEeecccc
Q 015899 269 AA----------VLPD----LDIRYMTKICKLLGLTALVEV-----------HDEREMDRVL----GIEGIELIGINNRN 319 (398)
Q Consensus 269 aa----------iL~~----~~L~~Li~~a~~LGL~~LVEV-----------ht~eEl~rAl----~l~Ga~iIGINnRd 319 (398)
.+ -++. +.+.+.+++|++.|+.+-.++ +|.+++.... ++ |++.|.+..
T Consensus 100 ~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~-G~d~i~l~D-- 176 (295)
T 1ydn_A 100 ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSL-GCHEVSLGD-- 176 (295)
T ss_dssp EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHH-TCSEEEEEE--
T ss_pred EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhc-CCCEEEecC--
Confidence 32 2332 235666899999999985332 4677766655 45 999888873
Q ss_pred Ccccc-cChhhHHHHhhhhcccccccCCceEE--E--ecCCCCHHHHHHHHHcCCCEEEE
Q 015899 320 LETFE-VDNSNTKKLLEGERGEIIRQKNIIVV--G--ESGLFTPDDIAYVQEAGVKAVLV 374 (398)
Q Consensus 320 L~tf~-vDl~~t~~L~~~i~~~~i~~~~v~vV--A--ESGI~t~eD~~~l~~~GadaVLV 374 (398)
|.. ..++...++++.++.. + + ++++. + -+|+. .+......++|++-|=+
T Consensus 177 --t~G~~~P~~~~~lv~~l~~~-~-~-~~~l~~H~Hn~~Gla-~an~l~Ai~aG~~~vd~ 230 (295)
T 1ydn_A 177 --TIGRGTPDTVAAMLDAVLAI-A-P-AHSLAGHYHDTGGRA-LDNIRVSLEKGLRVFDA 230 (295)
T ss_dssp --TTSCCCHHHHHHHHHHHHTT-S-C-GGGEEEEEBCTTSCH-HHHHHHHHHHTCCEEEE
T ss_pred --CCCCcCHHHHHHHHHHHHHh-C-C-CCeEEEEECCCcchH-HHHHHHHHHhCCCEEEe
Confidence 222 3456666666654321 2 1 22222 2 35663 44566777889987654
No 372
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=91.91 E-value=0.85 Score=44.20 Aligned_cols=181 Identities=12% Similarity=0.134 Sum_probs=109.6
Q ss_pred CceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEE--Ee---------ccCCcCCC-----CHHHHHHHHhcCCC
Q 015899 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLS--IL---------TDEKYFKG-----SFENLEAVRSAGVK 239 (398)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aIS--VL---------Td~~~F~G-----s~edL~~Ir~a~v~ 239 (398)
++.|||. |- .+....-..++|+.+.+.||.++- |. |-+.-|+| +++.|..+++. ..
T Consensus 18 ~~~vIAG-----pc--~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~sf~g~~l~~gl~~l~~~~~~-~G 89 (292)
T 1o60_A 18 PFVLFGG-----MN--VLESRDMAMQVCEAYVKVTEKLGVPYVFKASFDKANRSSIHSYRGPGMEEGLKIFQELKDT-FG 89 (292)
T ss_dssp CCEEEEE-----EE--ECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHH-HC
T ss_pred ceEEEEe-----cC--CccCHHHHHHHHHHHHHHhhhhCEeEEEhhhcccCCCCChHHhhhhhHHHHHHHHHHHHHH-cC
Confidence 4778884 32 122233456778888877765431 11 22223554 23445555554 68
Q ss_pred CcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHHHHhcc---CCC-cE
Q 015899 240 CPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLGI---EGI-EL 312 (398)
Q Consensus 240 lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~rAl~l---~Ga-~i 312 (398)
+|++.-= .|+.++..+.. ++|.+-+.+..+.+.+ |++.+..+|+.+++... |.+|+..|.+. .|. ++
T Consensus 90 lp~~te~--~d~~~~~~l~~-~vd~~kIgA~~~~n~~---Ll~~~a~~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i 163 (292)
T 1o60_A 90 VKIITDV--HEIYQCQPVAD-VVDIIQLPAFLARQTD---LVEAMAKTGAVINVKKPQFLSPSQMGNIVEKIEECGNDKI 163 (292)
T ss_dssp CEEEEEC--CSGGGHHHHHT-TCSEEEECGGGTTCHH---HHHHHHHTTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCE
T ss_pred CcEEEec--CCHHHHHHHHh-cCCEEEECcccccCHH---HHHHHHcCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeE
Confidence 9998754 58888888877 7999999887776643 55555588999999875 67888877643 354 33
Q ss_pred E----eeccccCcccccChhhHHHHhhhhcccccccCCceEEE-e----------cCCCC------HHHHHHHHHcCCCE
Q 015899 313 I----GINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVG-E----------SGLFT------PDDIAYVQEAGVKA 371 (398)
Q Consensus 313 I----GINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVA-E----------SGI~t------~eD~~~l~~~Gada 371 (398)
+ |+ +.++....+|+.....|.+.. .+++|+. . |+-+. +.-......+|++|
T Consensus 164 ~L~~rg~-~~~y~~~~~dl~~i~~lk~~~-------~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~G 235 (292)
T 1o60_A 164 ILCDRGT-NFGYDNLIVDMLGFSVMKKAS-------KGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAG 235 (292)
T ss_dssp EEEECCE-ECSTTCEECCTTHHHHHHHHT-------TSCCEEEEHHHHCC------------CTTHHHHHHHHHHHCCSE
T ss_pred EEEECCC-CCCCCccccCHHHHHHHHhhC-------CCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCE
Confidence 3 33 235555567888766654431 1344544 1 22222 23344556789999
Q ss_pred EEEcccc
Q 015899 372 VLVGESI 378 (398)
Q Consensus 372 VLVGeaL 378 (398)
++|-+-+
T Consensus 236 l~IE~H~ 242 (292)
T 1o60_A 236 LFLEAHP 242 (292)
T ss_dssp EEEEEES
T ss_pred EEEEecC
Confidence 9998776
No 373
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=91.85 E-value=2.3 Score=41.62 Aligned_cols=134 Identities=13% Similarity=0.209 Sum_probs=96.5
Q ss_pred CCCcE-EeccccCCHHHHHHHHHcCcCEEEEeccCCChHH----HHHHHHHHHHcCCcEEEEc-----------------
Q 015899 238 VKCPL-LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD----IRYMTKICKLLGLTALVEV----------------- 295 (398)
Q Consensus 238 v~lPV-L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~----L~~Li~~a~~LGL~~LVEV----------------- 295 (398)
.++|| |.-|-.-+...+.+|..+|-+.|.++.+-++-++ .++++++|+..|+.+=.|+
T Consensus 71 ~~VPValHlDHg~~~e~~~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~ 150 (305)
T 1rvg_A 71 ARVPVAVHLDHGSSYESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDA 150 (305)
T ss_dssp CSSCEEEEEEEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCT
T ss_pred CCCcEEEECCCCCCHHHHHHHHHcCCCeeeeCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCcccccccc
Confidence 57897 5667666778899999999999999999998543 7889999998877762221
Q ss_pred --CCHHHHHHHhccCCCcEEeeccc----cCc---ccccChhhHHHHhhhhcccccccCCceEEEec-------------
Q 015899 296 --HDEREMDRVLGIEGIELIGINNR----NLE---TFEVDNSNTKKLLEGERGEIIRQKNIIVVGES------------- 353 (398)
Q Consensus 296 --ht~eEl~rAl~l~Ga~iIGINnR----dL~---tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAES------------- 353 (398)
.|++|+.+..+..|++.+.+.-= .++ +-..|++...++.+.+ +-..++=..|
T Consensus 151 ~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~------~vpLVlHGgSsv~~~~~~~~~~~ 224 (305)
T 1rvg_A 151 LLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLV------PAPLVLHGASAVPPELVERFRAS 224 (305)
T ss_dssp TCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHC------CSCEEECSCCCCCHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhc------CCCEEEeCCCCCcHHHHHHHHhh
Confidence 46777777775348888766411 222 3456777777776642 2223333455
Q ss_pred --------CCCCHHHHHHHHHcCCCEEEEcccc
Q 015899 354 --------GLFTPDDIAYVQEAGVKAVLVGESI 378 (398)
Q Consensus 354 --------GI~t~eD~~~l~~~GadaVLVGeaL 378 (398)
|+ ..++++++.++|+.-|=|++.+
T Consensus 225 gg~~~~~~G~-p~e~i~~ai~~GV~KiNi~Tdl 256 (305)
T 1rvg_A 225 GGEIGEAAGI-HPEDIKKAISLGIAKINTDTDL 256 (305)
T ss_dssp TCCCCSCBCC-CHHHHHHHHHTTEEEEEECHHH
T ss_pred ccccccCCCC-CHHHHHHHHHCCCeEEEEChHH
Confidence 76 7788999999999999998776
No 374
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=91.83 E-value=0.23 Score=49.13 Aligned_cols=90 Identities=10% Similarity=0.106 Sum_probs=72.6
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-H
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-L 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~ 275 (398)
+..++++.+++.|...| |+.+-..+++.+..+++. +++||...+-+.++.++.++...| +|.|.+.... .. .
T Consensus 223 ~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit 296 (388)
T 2nql_A 223 RALELIAEMQPFDPWFA----EAPVWTEDIAGLEKVSKN-TDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH-KGIT 296 (388)
T ss_dssp HHHHHHHHHGGGCCSCE----ECCSCTTCHHHHHHHHTS-CCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH-HCHH
T ss_pred HHHHHHHHHhhcCCCEE----ECCCChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC-CCHH
Confidence 45677888888887765 445556789999999986 899999999999999999998776 8998886665 43 4
Q ss_pred HHHHHHHHHHHcCCcEEE
Q 015899 276 DIRYMTKICKLLGLTALV 293 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LV 293 (398)
+..++.+.|+..|+.+++
T Consensus 297 ~~~~i~~~A~~~g~~~~~ 314 (388)
T 2nql_A 297 NFIRIGALAAEHGIDVIP 314 (388)
T ss_dssp HHHHHHHHHHHHTCEECC
T ss_pred HHHHHHHHHHHcCCeEEe
Confidence 467788899999999877
No 375
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=91.73 E-value=0.16 Score=50.68 Aligned_cols=74 Identities=23% Similarity=0.220 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCChHH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPDLD 276 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~~~ 276 (398)
+..++|+.+++.|++.|+|-.-. .|. +.+..||+. +++||+.-..| ++.+..++...| ||.|.+.-..+.+.+
T Consensus 243 ~~~~la~~l~~~Gvd~i~v~~~~---~~~-~~~~~ik~~-~~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~lanPd 316 (362)
T 4ab4_A 243 TFTYVARELGKRGIAFICSRERE---ADD-SIGPLIKEA-FGGPYIVNERF-DKASANAALASGKADAVAFGVPFIANPD 316 (362)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC---CTT-CCHHHHHHH-HCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred HHHHHHHHHHHhCCCEEEECCCC---CCH-HHHHHHHHH-CCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcH
Confidence 35778999999999999986422 222 567888987 89999977666 999999999988 999999877776555
Q ss_pred H
Q 015899 277 I 277 (398)
Q Consensus 277 L 277 (398)
+
T Consensus 317 l 317 (362)
T 4ab4_A 317 L 317 (362)
T ss_dssp H
T ss_pred H
Confidence 4
No 376
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=91.71 E-value=0.47 Score=45.97 Aligned_cols=88 Identities=20% Similarity=0.189 Sum_probs=64.5
Q ss_pred CC-HHHHHHHHhcCCC-CcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHH
Q 015899 225 GS-FENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DER 299 (398)
Q Consensus 225 Gs-~edL~~Ir~a~v~-lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~e 299 (398)
|+ .+-++.+|+.... .+|.. + +-+..|+.+|..+|||.|+|.. ++.+++++.++..+..+-.+.+|+. |++
T Consensus 177 G~i~~av~~ar~~~~~~~~I~V-E-V~tleea~eA~~aGaD~I~LDn--~~~e~l~~av~~l~~~~~~v~ieASGGIt~e 252 (285)
T 1o4u_A 177 GSAERAVQEVRKIIPFTTKIEV-E-VENLEDALRAVEAGADIVMLDN--LSPEEVKDISRRIKDINPNVIVEVSGGITEE 252 (285)
T ss_dssp SSHHHHHHHHHTTSCTTSCEEE-E-ESSHHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHHHHHCTTSEEEEEECCCTT
T ss_pred CCHHHHHHHHHHhCCCCceEEE-E-eCCHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhhccCCCceEEEECCCCHH
Confidence 55 4466777764212 45553 2 2356899999999999999988 7888899998887765445677776 778
Q ss_pred HHHHHhccCCCcEEeecc
Q 015899 300 EMDRVLGIEGIELIGINN 317 (398)
Q Consensus 300 El~rAl~l~Ga~iIGINn 317 (398)
.+....+. |+++|++..
T Consensus 253 ni~~~a~t-GVD~IsvGs 269 (285)
T 1o4u_A 253 NVSLYDFE-TVDVISSSR 269 (285)
T ss_dssp TGGGGCCT-TCCEEEEGG
T ss_pred HHHHHHHc-CCCEEEEeH
Confidence 87777776 999999875
No 377
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=91.69 E-value=0.27 Score=48.69 Aligned_cols=85 Identities=15% Similarity=0.173 Sum_probs=55.8
Q ss_pred HHHHHHHHhcCCCCcEE--eccccCCHHHHHHHHHcCcCEEEEeccCC--C-hH-HHHHHHHHHHHcCCcEEEEcCCHHH
Q 015899 227 FENLEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVL--P-DL-DIRYMTKICKLLGLTALVEVHDERE 300 (398)
Q Consensus 227 ~edL~~Ir~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL--~-~~-~L~~Li~~a~~LGL~~LVEVht~eE 300 (398)
++.|+.+++. +++||+ .-..|.++.++.+.+.+|||+|+++.+++ + +. ..+.|.+.... ..|++-
T Consensus 229 lell~~i~~~-~~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~~--------~~~~~~ 299 (330)
T 2yzr_A 229 YEVLLEVKKL-GRLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYN--------YDKPDI 299 (330)
T ss_dssp HHHHHHHHHH-TSCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHT--------TTCHHH
T ss_pred HHHHHHHHHh-CCCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHHh--------cCCHHH
Confidence 3777888886 789994 67777789999999999999999999987 2 32 36666655432 345555
Q ss_pred HHHHhccCCCcEEeeccccC
Q 015899 301 MDRVLGIEGIELIGINNRNL 320 (398)
Q Consensus 301 l~rAl~l~Ga~iIGINnRdL 320 (398)
+..+-+--|-.+.|+|...+
T Consensus 300 ~~~~s~~~~~~m~g~~~~~~ 319 (330)
T 2yzr_A 300 VAEVSKNLGEAMKGIDITQI 319 (330)
T ss_dssp HHHHHTTCCCCCCC------
T ss_pred HHHHHhcccccCcCcccccc
Confidence 55443322556888886555
No 378
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=91.67 E-value=0.34 Score=48.28 Aligned_cols=121 Identities=10% Similarity=0.016 Sum_probs=87.7
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. .....|.... ..| +....+..++++.+++.|...| |+.+-.++++.+..+|+. +++||
T Consensus 189 ~v~avR~a~--G~d~~l~vDa-----n~~-~~~~~~A~~~~~~L~~~~i~~i----EeP~~~~~~~~~~~l~~~-~~iPI 255 (394)
T 3mqt_A 189 YLRELREVI--GWDMDMMVDC-----LYR-WTDWQKARWTFRQLEDIDLYFI----EACLQHDDLIGHQKLAAA-INTRL 255 (394)
T ss_dssp HHHHHHHHH--CSSSEEEEEC-----TTC-CSCHHHHHHHHHHTGGGCCSEE----ESCSCTTCHHHHHHHHHH-SSSEE
T ss_pred HHHHHHHHh--CCCCeEEEEC-----CCC-CCCHHHHHHHHHHHhhcCCeEE----ECCCCcccHHHHHHHHhh-CCCCE
Confidence 345555543 1235676653 112 2112245677888888887766 455666789999999997 89999
Q ss_pred EeccccCCHHHHHHHHHc-CcCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEcCCH
Q 015899 243 LCKEFIVDAWQIYYARTK-GADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHDE 298 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~-GADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEVht~ 298 (398)
...+-+.++++..++... .+|.|.+....... .+...+...|+..|+.++ +|+.
T Consensus 256 a~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~--~h~~ 311 (394)
T 3mqt_A 256 CGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIMDICEHHNAQLM--PHNW 311 (394)
T ss_dssp EECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHHHHHHHHTCEEC--CCCC
T ss_pred EeCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEe--ccCC
Confidence 999999999999888766 58999998887754 457888899999999987 5664
No 379
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=91.67 E-value=0.91 Score=44.63 Aligned_cols=119 Identities=9% Similarity=0.072 Sum_probs=87.2
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. .....|..+.- |-+. ..+..++++.+++.|... + |+.+-..+++.+..+|+. +++||
T Consensus 177 ~v~avR~~~--g~~~~l~vDan------~~~~-~~~a~~~~~~l~~~~i~~---i-EqP~~~~~~~~~~~l~~~-~~iPi 242 (370)
T 1chr_A 177 HMEALSNSL--GSKAYLRVDVN------QAWD-EQVASVYIPELEALGVEL---I-EQPVGRENTQALRRLSDN-NRVAI 242 (370)
T ss_dssp HHHHHHHHS--STTCCEEEECT------TCCC-TTHHHHHTHHHHTTTEEE---E-ECCSCTTCHHHHHHHHHH-SCSEE
T ss_pred HHHHHHHhc--CCCCEEEEECC------CCCC-HHHHHHHHHHHHhcCCCE---E-ECCCCcccHHHHHHHHhh-CCCCE
Confidence 345566543 12356777652 2222 235667889999887443 3 344566789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEc
Q 015899 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEV 295 (398)
...+-+.+.+++.+....| +|.|.+....... .+...+...|+..|+.+++-+
T Consensus 243 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (370)
T 1chr_A 243 MADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGT 297 (370)
T ss_dssp EESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEECC
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 9999999999999888765 8999998887754 568888999999999988653
No 380
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=91.64 E-value=8.5 Score=37.72 Aligned_cols=168 Identities=15% Similarity=0.207 Sum_probs=98.1
Q ss_pred HHHHHHHHHHcCCcEEEEe-ccCCcCCCCHHHH-HH---HHhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEe
Q 015899 199 PVEIARSYEKGGAACLSIL-TDEKYFKGSFENL-EA---VRSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLI 268 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL-~~---Ir~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLi 268 (398)
..++++.+.+.|+++|-|+ |--+++.=+.+.- +. +++. .-.+||+..=.-.+.. +...|..+|||+|+++
T Consensus 54 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~ 133 (343)
T 2v9d_A 54 TAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVI 133 (343)
T ss_dssp HHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 3456677889999999987 2222222233322 22 2322 2368999654433433 2345667899999998
Q ss_pred ccCC---ChHH-HHHHHHHHHHcCCcEEEE-c-------CCHHHHHHHh-ccCCCcEEeeccccCcccccChhhHHHHhh
Q 015899 269 AAVL---PDLD-IRYMTKICKLLGLTALVE-V-------HDEREMDRVL-GIEGIELIGINNRNLETFEVDNSNTKKLLE 335 (398)
Q Consensus 269 aaiL---~~~~-L~~Li~~a~~LGL~~LVE-V-------ht~eEl~rAl-~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~ 335 (398)
.-.. +++. ++++-..|...++.+++= + =+.+.+.+.. +. ..++||-. -.-|+....+++.
T Consensus 134 ~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~~--pnIvgiKd-----ssgd~~~~~~l~~ 206 (343)
T 2v9d_A 134 NPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSR--SNIIGIKD-----TIDSVAHLRSMIH 206 (343)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHHC--TTEEEEEE-----CCSCHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHhC--CCEEEEEe-----CCCCHHHHHHHHH
Confidence 8754 4555 445555666778877652 1 1456666655 44 47999972 2346777777765
Q ss_pred hhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015899 336 GERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 336 ~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 380 (398)
..+.. ..+..+. +|-. +.+.....+|++|++-|.+=+-
T Consensus 207 ~~~~~---~~~f~v~--~G~D--~~~l~~l~~Ga~G~is~~anv~ 244 (343)
T 2v9d_A 207 TVKGA---HPHFTVL--CGYD--DHLFNTLLLGGDGAISASGNFA 244 (343)
T ss_dssp HHHHH---CTTCEEE--ESSG--GGHHHHHHTTCCEECCGGGTTC
T ss_pred hcCCC---CCCEEEE--ECcH--HHHHHHHHCCCCEEEeCHHHhH
Confidence 42100 0244443 3432 2355566789999998876443
No 381
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=91.59 E-value=0.52 Score=46.82 Aligned_cols=92 Identities=12% Similarity=0.093 Sum_probs=72.2
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-H
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-L 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~ 275 (398)
+..++++.+++.|... +-+| +-..+++.++.+|+. +++||...+-+.+++++.++...| +|.|.+....... .
T Consensus 233 ~ai~~~~~l~~~~i~~---iE~P-~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 307 (410)
T 2gl5_A 233 SAIQFAKAIEKYRIFL---YEEP-IHPLNSDNMQKVSRS-TTIPIATGERSYTRWGYRELLEKQSIAVAQPDLCLCGGIT 307 (410)
T ss_dssp HHHHHHHHHGGGCEEE---EECS-SCSSCHHHHHHHHHH-CSSCEEECTTCCTTHHHHHHHHTTCCSEECCCTTTTTHHH
T ss_pred HHHHHHHHHHhcCCCe---EECC-CChhhHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 4456677777766443 3344 555789999999987 899999999999999999998776 7999888777654 4
Q ss_pred HHHHHHHHHHHcCCcEEEE
Q 015899 276 DIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVE 294 (398)
+..++.+.|+..|+.+++-
T Consensus 308 ~~~~ia~~A~~~gi~~~~h 326 (410)
T 2gl5_A 308 EGKKICDYANIYDTTVQVH 326 (410)
T ss_dssp HHHHHHHHHHTTTCEECCC
T ss_pred HHHHHHHHHHHcCCeEeec
Confidence 5778889999999998763
No 382
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=91.59 E-value=0.032 Score=54.94 Aligned_cols=135 Identities=16% Similarity=0.115 Sum_probs=81.9
Q ss_pred CCHHHHHHHHHcCcCEEEEeccCC------ChHHHHHHHHHHHHcCCcEEEEcCCH-H------------------HHHH
Q 015899 249 VDAWQIYYARTKGADAVLLIAAVL------PDLDIRYMTKICKLLGLTALVEVHDE-R------------------EMDR 303 (398)
Q Consensus 249 id~~QI~eAr~~GADaVLLiaaiL------~~~~L~~Li~~a~~LGL~~LVEVht~-e------------------El~r 303 (398)
|.+.+ .+.+|++.|+|+.+=. +|+.+..=++.|.+.||.++++|-.. + .++.
T Consensus 131 ISa~m---Lkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~aAl~~GL~pIvCVGEtleere~~~~~~g~t~~vv~~Ql~~ 207 (310)
T 3s6d_A 131 ISPVC---LRDMNVSIVELGHAERRAIFGETDQQVARKAAAAADQGLIPLVCIGEVSTLGPIVSEAIGRAVGECEAQIRP 207 (310)
T ss_dssp CCHHH---HHHTTCCEEEESCHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEECCCSCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHH---HHHcCCCEEEecccccccccCCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHhhhhccccccHHHHHHHHHHH
Confidence 45555 4567999999999832 45566777788889999999999632 2 1222
Q ss_pred Hhc-c----------CCCcEEeeccccCcccccChhhHHHHhhhhcccc---c--ccCCceEEEecCCCCHHHHHH-HHH
Q 015899 304 VLG-I----------EGIELIGINNRNLETFEVDNSNTKKLLEGERGEI---I--RQKNIIVVGESGLFTPDDIAY-VQE 366 (398)
Q Consensus 304 Al~-l----------~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~---i--~~~~v~vVAESGI~t~eD~~~-l~~ 366 (398)
++. + +....||.. + + .+.+...+....+|.-. + ....+.++..|+++ ++.+.. +..
T Consensus 208 ~l~~l~~~~~vVIAYEPVWAIGTG-k---~--Atpe~aqevh~~IR~~l~~~~~~~a~~vrILYGGSV~-~~n~~~~~l~ 280 (310)
T 3s6d_A 208 VLEALPRDAPVIFAYEPVWAIGKP-Q---P--ARVDHVGAVVSGIRSVIERIDRHRKGEVRILYGGSAG-PGLWGPGGLG 280 (310)
T ss_dssp HHHHSCTTSCEEEEECCGGGC-----------CCHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEEEEEC-TTTTTTTSGG
T ss_pred HHhcCCcccceEEEECChhhccCC-C---C--CCHHHHHHHHHHHHHHHHHhhhcccCceeEEEcCccC-HHHHhhhccc
Confidence 221 1 011123332 1 1 23444444333332210 0 12357888888884 444444 124
Q ss_pred cCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 367 AGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 367 ~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
.++||+|||.+-++.++..+.++++.+
T Consensus 281 ~dVDG~LVGgASL~a~~F~~Ii~e~~~ 307 (310)
T 3s6d_A 281 KEVDGMFLGRFAHDIEGVRKVVREVEE 307 (310)
T ss_dssp GTCSEEEECGGGGSHHHHHHHHHHHHH
T ss_pred CCCCEEEeeheeecHHHHHHHHHHHHH
Confidence 899999999999999999988888753
No 383
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=91.56 E-value=0.67 Score=45.25 Aligned_cols=94 Identities=16% Similarity=0.223 Sum_probs=72.8
Q ss_pred CHHHHHHHHHH--cCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHc-CcCEEEEeccCCC-
Q 015899 198 DPVEIARSYEK--GGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK-GADAVLLIAAVLP- 273 (398)
Q Consensus 198 dp~~iA~aY~~--~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~-GADaVLLiaaiL~- 273 (398)
+..++++..++ .|...| |+.+-..+++.+..+++. +++||...+-+.+++++.++... ++|.|.+......
T Consensus 200 ~a~~~~~~l~~~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 274 (366)
T 1tkk_A 200 EAVTAIRKMEDAGLGIELV----EQPVHKDDLAGLKKVTDA-TDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGG 274 (366)
T ss_dssp HHHHHHHHHHHTTCCEEEE----ECCSCTTCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTS
T ss_pred HHHHHHHHHhhcCCCceEE----ECCCCcccHHHHHHHHhh-CCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcC
Confidence 34567888888 664433 444556789999999987 89999999999999999888765 4899998776653
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcC
Q 015899 274 DLDIRYMTKICKLLGLTALVEVH 296 (398)
Q Consensus 274 ~~~L~~Li~~a~~LGL~~LVEVh 296 (398)
-.+..++.+.|+..|+.+++-+.
T Consensus 275 it~~~~i~~~A~~~g~~~~~~~~ 297 (366)
T 1tkk_A 275 ISGAEKINAMAEACGVECMVGSM 297 (366)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCS
T ss_pred HHHHHHHHHHHHHcCCcEEecCc
Confidence 34578888999999999887544
No 384
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=91.50 E-value=0.53 Score=46.69 Aligned_cols=93 Identities=15% Similarity=0.229 Sum_probs=73.8
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DL 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~ 275 (398)
+..++++.+++.|...| |+.+-..+++.+..+++. +++||...+-+.+++++.++...| +|.|.+...... -.
T Consensus 204 ~a~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 278 (397)
T 2qde_A 204 QALTTIRALEKYNLSKI----EQPLPAWDLDGMARLRGK-VATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLL 278 (397)
T ss_dssp HHHHHHHHHGGGCCSCE----ECCSCTTCHHHHHHHHTT-CSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHH
T ss_pred HHHHHHHHHHhCCCCEE----ECCCChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHH
Confidence 34567788888887754 444556789999999986 899999999999999999887665 899998776653 34
Q ss_pred HHHHHHHHHHHcCCcEEEEc
Q 015899 276 DIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEV 295 (398)
+..++.+.|+..|+.+++-+
T Consensus 279 ~~~~i~~~A~~~g~~~~~~~ 298 (397)
T 2qde_A 279 KAQRWLTLARLANLPVICGC 298 (397)
T ss_dssp HHHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHHHcCCeEEEec
Confidence 57788899999999987764
No 385
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=91.46 E-value=0.19 Score=50.13 Aligned_cols=75 Identities=20% Similarity=0.114 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCChHH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPDLD 276 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~~~ 276 (398)
+..++|+.+++.|++.|+|-.-. + |. +.+..||+. +++||+.-..| ++.+..++...| ||.|.+.-.++.+.+
T Consensus 251 ~~~~la~~l~~~Gvd~i~v~~~~--~-~~-~~~~~ik~~-~~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~ladPd 324 (361)
T 3gka_A 251 TFGHVARELGRRRIAFLFARESF--G-GD-AIGQQLKAA-FGGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIANPD 324 (361)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC--S-TT-CCHHHHHHH-HCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred HHHHHHHHHHHcCCCEEEECCCC--C-CH-HHHHHHHHH-cCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcH
Confidence 35778999999999999986422 2 22 567889987 89999977666 999999999988 999999887776655
Q ss_pred HH
Q 015899 277 IR 278 (398)
Q Consensus 277 L~ 278 (398)
+-
T Consensus 325 l~ 326 (361)
T 3gka_A 325 LP 326 (361)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 386
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=91.45 E-value=0.46 Score=47.18 Aligned_cols=107 Identities=15% Similarity=0.168 Sum_probs=80.7
Q ss_pred CceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHH
Q 015899 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIY 255 (398)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~ 255 (398)
...|..+.- |-+. ..+..++++.+++.|...| |+.+-..+++.++.+++. +++||...+-+.+++++.
T Consensus 215 d~~l~vDan------~~~~-~~~a~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~ 282 (407)
T 2o56_A 215 DVDIIAEMH------AFTD-TTSAIQFGRMIEELGIFYY----EEPVMPLNPAQMKQVADK-VNIPLAAGERIYWRWGYR 282 (407)
T ss_dssp TSEEEEECT------TCSC-HHHHHHHHHHHGGGCCSCE----ECSSCSSSHHHHHHHHHH-CCSCEEECTTCCHHHHHH
T ss_pred CCEEEEECC------CCCC-HHHHHHHHHHHHhcCCCEE----eCCCChhhHHHHHHHHHh-CCCCEEeCCCcCCHHHHH
Confidence 466777652 2121 1245567888888887654 444556789999999987 899999999999999999
Q ss_pred HHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEE
Q 015899 256 YARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 256 eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVE 294 (398)
++...| +|.|.+....... .+..++.+.|+..|+.+++-
T Consensus 283 ~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h 323 (407)
T 2o56_A 283 PFLENGSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIH 323 (407)
T ss_dssp HHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCC
T ss_pred HHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeec
Confidence 988776 8999888777754 45778889999999998773
No 387
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=91.41 E-value=6.3 Score=36.02 Aligned_cols=189 Identities=14% Similarity=0.099 Sum_probs=104.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEe---cccc--------CC--HHHHHHHHHcCc
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC---KEFI--------VD--AWQIYYARTKGA 262 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~---KDFI--------id--~~QI~eAr~~GA 262 (398)
..++.+..+...+.|.++|-+. .+|. ..+.++..-+. ..+.+.. .++. ++ ...+..|..+||
T Consensus 30 ~~~~~~~l~~~~~~G~~~vEl~---~~~~-~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~ 104 (301)
T 3cny_A 30 DNNLQQLLSDIVVAGFQGTEVG---GFFP-GPEKLNYELKL-RNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINA 104 (301)
T ss_dssp TCCHHHHHHHHHHHTCCEECCC---TTCC-CHHHHHHHHHH-TTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHhCCCEEEec---CCCC-CHHHHHHHHHH-CCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCC
Confidence 3456666666666777776664 2333 45555444322 2333321 1111 01 123667889999
Q ss_pred CEEEEec------cCC-----------Ch-------HHHHHHHHHHHHcCCcEEEEcC------CHHHHHHHhccCCCcE
Q 015899 263 DAVLLIA------AVL-----------PD-------LDIRYMTKICKLLGLTALVEVH------DEREMDRVLGIEGIEL 312 (398)
Q Consensus 263 DaVLLia------aiL-----------~~-------~~L~~Li~~a~~LGL~~LVEVh------t~eEl~rAl~l~Ga~i 312 (398)
+.|.+.. ... .+ +.|.++.++|+..|+.+.+|-| +.+++.+.++.-+.+-
T Consensus 105 ~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~l~~~~~~~~ 184 (301)
T 3cny_A 105 PVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHHHMGTGIQTKEETDRLMANTDPKL 184 (301)
T ss_dssp CEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSSSCSHHHHHHHHHTSCTTT
T ss_pred CEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCcccCCHHHHHHHHHhCCccc
Confidence 9998764 111 11 2366777788889999999987 6788888776434455
Q ss_pred EeeccccC---cccccChhhHH-HHhhhhccccccc----------------------CCceEEEecCCCCHHHHHHHHH
Q 015899 313 IGINNRNL---ETFEVDNSNTK-KLLEGERGEIIRQ----------------------KNIIVVGESGLFTPDDIAYVQE 366 (398)
Q Consensus 313 IGINnRdL---~tf~vDl~~t~-~L~~~i~~~~i~~----------------------~~v~vVAESGI~t~eD~~~l~~ 366 (398)
+|++ -|. .....|+.... ++.+.+..-.+.. .....+.+|-|.-.+-++.+.+
T Consensus 185 vg~~-~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~id~~~i~~~L~~ 263 (301)
T 3cny_A 185 VGLL-YDTGHIAVSDGDYMALLNAHIDRVVHVHFKDVRRSKEEECRAKGLTFQGSFLNGMFTVPGDGDLDFKPVYDKLIA 263 (301)
T ss_dssp CEEE-EEHHHHHHHHSCSHHHHHHHGGGEEEEEECEECHHHHHHHHHHTCCHHHHHHTTCEECTTTSSCCCHHHHHHHHH
T ss_pred eeEE-echHHHHHcCCCHHHHHHHHHhheeEEEeecCCcchhhhhhhcccchhhHhhcCccccCCCCCccHHHHHHHHHh
Confidence 6665 111 11122433322 2222211100000 0112345667777788888999
Q ss_pred cCCCEEEEcccccCC--CChHHHHHh
Q 015899 367 AGVKAVLVGESIVKQ--DDPGKGITG 390 (398)
Q Consensus 367 ~GadaVLVGeaLmk~--~dp~~~i~~ 390 (398)
.|+++.++=|....+ .++.+.+++
T Consensus 264 ~gy~g~~~~E~~~~~~~~~~~~~~~~ 289 (301)
T 3cny_A 264 NNYKGWIVVEAEQDPSKANPLEMAQI 289 (301)
T ss_dssp TTCCEEEEECCCCCTTTSCHHHHHHH
T ss_pred cCCCeEEEEeecCCCCcCChHHHHHH
Confidence 999999988877532 466555543
No 388
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=91.40 E-value=0.92 Score=44.31 Aligned_cols=85 Identities=19% Similarity=0.282 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecC
Q 015899 275 LDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESG 354 (398)
Q Consensus 275 ~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESG 354 (398)
+-|+.|.++++++||.++.|++|.+.++.+.++ ++++-|..++.+++. .-.++.+ .+.+|+..-|
T Consensus 99 ~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~--vd~lkIgA~~~~n~~----LLr~va~---------~gkPVilK~G 163 (298)
T 3fs2_A 99 KALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV--VDVLQIPAFLCRQTD----LLIAAAR---------TGRVVNVKKG 163 (298)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT--CSEEEECGGGTTCHH----HHHHHHH---------TTSEEEEECC
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh--CCEEEECccccCCHH----HHHHHHc---------cCCcEEEeCC
Confidence 458889999999999999999999999998775 899999998887764 2233332 3678999999
Q ss_pred CC-CHHHHH----HHHHcCCCEEEE
Q 015899 355 LF-TPDDIA----YVQEAGVKAVLV 374 (398)
Q Consensus 355 I~-t~eD~~----~l~~~GadaVLV 374 (398)
.+ |++|+. ++.+.|.+-|++
T Consensus 164 ms~t~~ei~~ave~i~~~Gn~~iiL 188 (298)
T 3fs2_A 164 QFLAPWDMKNVLAKITESGNPNVLA 188 (298)
T ss_dssp TTCCGGGHHHHHHHHHTTTCCCEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEE
Confidence 95 887764 455678876766
No 389
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=91.38 E-value=0.4 Score=46.90 Aligned_cols=94 Identities=13% Similarity=0.114 Sum_probs=73.6
Q ss_pred CHH-HHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-h
Q 015899 198 DPV-EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-D 274 (398)
Q Consensus 198 dp~-~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~ 274 (398)
+.. ++++.+++.|...| |+.+-..+++.+..+++. +++||...+-+.++.++.++...| +|.|.+...... -
T Consensus 200 ~a~~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 274 (369)
T 2p8b_A 200 ANTLTALRSLGHLNIDWI----EQPVIADDIDAMAHIRSK-TDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGI 274 (369)
T ss_dssp HHHHHHHHTSTTSCCSCE----ECCBCTTCHHHHHHHHHT-CCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSH
T ss_pred HHHHHHHHHHHhCCCcEE----ECCCCcccHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCH
Confidence 455 67777777777654 344566789999999986 899999999999999998887664 899999776654 3
Q ss_pred HHHHHHHHHHHHcCCcEEEEcC
Q 015899 275 LDIRYMTKICKLLGLTALVEVH 296 (398)
Q Consensus 275 ~~L~~Li~~a~~LGL~~LVEVh 296 (398)
.+..++.+.|+..|+.+++-+.
T Consensus 275 t~~~~i~~~A~~~g~~~~~~~~ 296 (369)
T 2p8b_A 275 YPAVKLAHQAEMAGIECQVGSM 296 (369)
T ss_dssp HHHHHHHHHHHHTTCEEEECCS
T ss_pred HHHHHHHHHHHHcCCcEEecCC
Confidence 4577888999999999886543
No 390
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=91.33 E-value=5.9 Score=38.27 Aligned_cols=167 Identities=17% Similarity=0.166 Sum_probs=97.1
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHHH-HHHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFEN-LEAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~ed-L~~I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++++.+.+.|+++|-|+ |=-+++.=+.+. .+.+ .+. .-.+||+..=.- +.. ....|..+|||+|+++.
T Consensus 36 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~~ 114 (316)
T 3e96_A 36 KETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGY-ATSTAIELGNAAKAAGADAVMIHM 114 (316)
T ss_dssp HHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEcC
Confidence 345667788999999886 222222223332 2222 222 236899965332 333 23456788999999986
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEEc----CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccc
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVEV----HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEI 341 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVEV----ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~ 341 (398)
-.. +++. .+++-..|...++.+++=- =+.+.+.+..+. ..++||-.. .-|+....+++...
T Consensus 115 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La~~--pnIvgiKds-----sgd~~~~~~~~~~~---- 183 (316)
T 3e96_A 115 PIHPYVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLAPL--QNLVGVKYA-----INDLPRFAKVVRSI---- 183 (316)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHTTC--TTEEEEEEC-----CCCHHHHHHHHTTS----
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHcC--CCEEEEEeC-----CCCHHHHHHHHHhc----
Confidence 653 4555 4555566677788776532 145555555554 569999732 34677777777642
Q ss_pred cccCCce-EEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 342 IRQKNII-VVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 342 i~~~~v~-vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
.+.+.. ++ +|-.. .-+..+..+|++|++-|.+=+-++
T Consensus 184 -~~~~f~~v~--~G~d~-~~~~~~l~~G~~G~is~~an~~P~ 221 (316)
T 3e96_A 184 -PEEHQIAWI--CGTAE-KWAPFFWHAGAKGFTSGLVNLLPQ 221 (316)
T ss_dssp -CGGGCCEEE--ETTCT-TTHHHHHHHTCCEEEESGGGTCHH
T ss_pred -CCCCceEEE--eCChH-HHHHHHHHCCCCEEEechhhhhHH
Confidence 111333 43 33321 113345678999999998755443
No 391
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=91.32 E-value=0.73 Score=44.99 Aligned_cols=135 Identities=21% Similarity=0.265 Sum_probs=79.8
Q ss_pred CccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEE------Eec-cC-CcCCCCH-HHH
Q 015899 160 ARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLS------ILT-DE-KYFKGSF-ENL 230 (398)
Q Consensus 160 ~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aIS------VLT-d~-~~F~Gs~-edL 230 (398)
.+.|.++++. ....|+.-.|..|--. +.+ -.+..-||+..-+ ||- |. -.|.|+. +-+
T Consensus 135 t~~~v~a~~g------~~~~i~~TRKt~Pglr-------~l~-kyAv~~GGg~nHR~gL~d~vlikdNHi~~~G~i~~Av 200 (298)
T 3gnn_A 135 TRQYVDRIAD------TRARILDTRKTLPGLR-------LAQ-KYAVRVGGGANQRLALYAGILIKENHIAAAGGVGEAL 200 (298)
T ss_dssp HHHHHHHTTT------SSCCEECCSCCCTTCH-------HHH-HHHHHHTTCCCC-------------------CHHHHH
T ss_pred HHHHHHHhCC------CCeEEEEecCCCcchH-------HHH-HhhHHhcCccceecCCCcEEEEeHHHHHHcCCHHHHH
Confidence 4556666653 2356777777777421 111 2233345553222 111 11 1244554 445
Q ss_pred HHHHhcCCCCcE--EeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHHHHh
Q 015899 231 EAVRSAGVKCPL--LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVL 305 (398)
Q Consensus 231 ~~Ir~a~v~lPV--L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~rAl 305 (398)
+.+|+.....|| ++..+ .|+.+|..+|||.|+|+- .+.+++++.++.. .=.+.+|++ |++.+....
T Consensus 201 ~~~r~~~p~~~ieVEvdtl----de~~eAl~aGaD~I~LDn--~~~~~l~~av~~i---~~~v~ieaSGGI~~~~i~~~a 271 (298)
T 3gnn_A 201 DAAFALNAEVPVQIEVETL----DQLRTALAHGARSVLLDN--FTLDMMRDAVRVT---EGRAVLEVSGGVNFDTVRAIA 271 (298)
T ss_dssp HHHHHHC--CCCEEEESSH----HHHHHHHHTTCEEEEEES--CCHHHHHHHHHHH---TTSEEEEEESSCSTTTHHHHH
T ss_pred HHHHHhCCCCCEEEEeCCH----HHHHHHHHcCCCEEEECC--CCHHHHHHHHHHh---CCCCeEEEEcCCCHHHHHHHH
Confidence 666664224454 44443 489999999999999987 6777788777654 346888886 788888888
Q ss_pred ccCCCcEEeeccc
Q 015899 306 GIEGIELIGINNR 318 (398)
Q Consensus 306 ~l~Ga~iIGINnR 318 (398)
+. |+|+|++..-
T Consensus 272 ~t-GVD~isvG~l 283 (298)
T 3gnn_A 272 ET-GVDRISIGAL 283 (298)
T ss_dssp HT-TCSEEECGGG
T ss_pred Hc-CCCEEEECCe
Confidence 86 9999999853
No 392
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=91.29 E-value=1.1 Score=43.15 Aligned_cols=182 Identities=14% Similarity=0.112 Sum_probs=109.8
Q ss_pred CceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEE--Ee---------ccCCcCCC-----CHHHHHHHHhcCCC
Q 015899 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLS--IL---------TDEKYFKG-----SFENLEAVRSAGVK 239 (398)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aIS--VL---------Td~~~F~G-----s~edL~~Ir~a~v~ 239 (398)
++.||| .|- .+....-..++|+.+.+.||.+.- |. |-+.-|+| +++.|..+++. ..
T Consensus 15 ~~~vIA-----Gpc--~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~~~~g~~l~~gl~~l~~~~~~-~G 86 (280)
T 2qkf_A 15 PFVLFG-----GIN--VLESLDSTLQTCAHYVEVTRKLGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAE-FG 86 (280)
T ss_dssp CCEEEE-----EEE--ECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCSSCSSSSSCCCSCHHHHHHHHHHHHHH-HC
T ss_pred ceEEEE-----ecC--CCCCHHHHHHHHHHHHHhhhhcceeEEEeeeeecCCCCChHHhhccchHHHHHHHHHHHHH-cC
Confidence 467888 342 122333466778888887766531 11 22222655 23445555554 68
Q ss_pred CcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHHHHhcc---CCC-cE
Q 015899 240 CPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLGI---EGI-EL 312 (398)
Q Consensus 240 lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~rAl~l---~Ga-~i 312 (398)
+|++.-= .|+.++...... +|.+-+.+.-+.+.+ |++.+..+|+.+++-.. |.+|+..|.+. .|. ++
T Consensus 87 l~~~te~--~d~~~~~~l~~~-~d~~kIga~~~~n~~---ll~~~a~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i 160 (280)
T 2qkf_A 87 IPVITDV--HEPHQCQPVAEV-CDVIQLPAFLARQTD---LVVAMAKTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKL 160 (280)
T ss_dssp CCEEEEC--CSGGGHHHHHHH-CSEEEECGGGTTBHH---HHHHHHHTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCE
T ss_pred CcEEEec--CCHHHHHHHHhh-CCEEEECcccccCHH---HHHHHHcCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeE
Confidence 9998743 588898888888 999988887776643 55555678999998875 67888877643 354 33
Q ss_pred E----eeccccCcccccChhhHHHHhhhhcccccccCCceEEEe-----------cCCC-C-----HHHHHHHHHcCCCE
Q 015899 313 I----GINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGE-----------SGLF-T-----PDDIAYVQEAGVKA 371 (398)
Q Consensus 313 I----GINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAE-----------SGI~-t-----~eD~~~l~~~Gada 371 (398)
+ |+ +.++....+|+.....|.+.. .+++|+.- ||-+ . +.-......+|++|
T Consensus 161 ~L~~rg~-~~~~~~~~~dl~~i~~lk~~~-------~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G 232 (280)
T 2qkf_A 161 ILCERGS-SFGYDNLVVDMLGFGVMKQTC-------GNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAG 232 (280)
T ss_dssp EEEECCE-ECSTTCEECCTTHHHHHHHHT-------TTCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSE
T ss_pred EEEECCC-CCCCCccccCHHHHHHHHHhC-------CCCCEEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCE
Confidence 3 33 246666668887655554431 13445541 1221 2 33345556789999
Q ss_pred EEEccccc
Q 015899 372 VLVGESIV 379 (398)
Q Consensus 372 VLVGeaLm 379 (398)
++|-+-+.
T Consensus 233 ~~IE~H~~ 240 (280)
T 2qkf_A 233 LFLESHPD 240 (280)
T ss_dssp EEEEC---
T ss_pred EEEeecCC
Confidence 99988875
No 393
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=91.22 E-value=0.69 Score=45.39 Aligned_cols=119 Identities=13% Similarity=0.083 Sum_probs=87.3
Q ss_pred cHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCc
Q 015899 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP 241 (398)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lP 241 (398)
....++++.. ....+..+. . |-+.. .+ .++++.+++.|...| |+.+-..+++.+..+++. +++|
T Consensus 178 ~~v~avr~a~---~~~~l~vDa-----n-~~~~~-~~-~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~ip 241 (375)
T 1r0m_A 178 QPVRATREAF---PDIRLTVDA-----N-SAYTL-AD-AGRLRQLDEYDLTYI----EQPLAWDDLVDHAELARR-IRTP 241 (375)
T ss_dssp HHHHHHHHHC---TTSCEEEEC-----T-TCCCG-GG-HHHHHTTGGGCCSCE----ECCSCTTCSHHHHHHHHH-CSSC
T ss_pred HHHHHHHHHc---CCCeEEEeC-----C-CCCCH-HH-HHHHHHHHhCCCcEE----ECCCCcccHHHHHHHHHh-CCCC
Confidence 4456666543 235677775 1 22332 24 778888888776655 344556788999999987 8999
Q ss_pred EEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEcC
Q 015899 242 LLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVH 296 (398)
Q Consensus 242 VL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEVh 296 (398)
|...+-+.+++++.+....| +|.|.+....... .+..++.+.|+..|+.+|+-..
T Consensus 242 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~ 298 (375)
T 1r0m_A 242 LCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCGGM 298 (375)
T ss_dssp EEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCC
T ss_pred EEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEecCc
Confidence 99999999999999887666 8999998877743 5578899999999999876543
No 394
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=91.13 E-value=0.52 Score=46.98 Aligned_cols=121 Identities=8% Similarity=0.057 Sum_probs=87.9
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. .....|..+. ..| +....+..++++.+++.|...| |+.+-.++++.+..+|+. +++||
T Consensus 194 ~v~avR~a~--G~d~~l~vDa-----N~~-~~~~~~A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPI 260 (394)
T 3mkc_A 194 YLRELRGIL--GHDTDMMVDY-----LYR-FTDWYEVARLLNSIEDLELYFA----EATLQHDDLSGHAKLVEN-TRSRI 260 (394)
T ss_dssp HHHHHHHHH--CSSSEEEEEC-----TTC-CCCHHHHHHHHHHTGGGCCSEE----ESCSCTTCHHHHHHHHHH-CSSCB
T ss_pred HHHHHHHHh--CCCCeEEEeC-----CCC-CCCHHHHHHHHHHhhhcCCeEE----ECCCCchhHHHHHHHHhh-CCCCE
Confidence 345555543 1235666654 112 2112245677888888887665 455666789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEcCCH
Q 015899 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHDE 298 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEVht~ 298 (398)
...+-+.++++..++...| +|.|.+....... .+...+...|+..|+.++ +|+.
T Consensus 261 a~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~--~h~~ 316 (394)
T 3mkc_A 261 CGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELRRITEMATANNVQVM--PHNW 316 (394)
T ss_dssp EECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEC--CCCC
T ss_pred EeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEe--ecCC
Confidence 9999999999999888775 8999998888765 457888899999999987 5664
No 395
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=91.13 E-value=0.69 Score=45.67 Aligned_cols=118 Identities=14% Similarity=0.180 Sum_probs=87.6
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++... ....+..+.- |-+. ..+..++++.+++.|...| |+.+-.++++.+..+|+. +++||
T Consensus 180 ~v~avR~~~g--~~~~l~vDan------~~~~-~~~A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~ipI 245 (377)
T 3my9_A 180 ILETMRGEFG--ERIDLRLDFN------QALT-PFGAMKILRDVDAFRPTFI----EQPVPRRHLDAMAGFAAA-LDTPI 245 (377)
T ss_dssp HHHHHHHHHG--GGSEEEEECT------TCCC-TTTHHHHHHHHHTTCCSCE----ECCSCTTCHHHHHHHHHH-CSSCE
T ss_pred HHHHHHHHhC--CCCeEEEeCC------CCcC-HHHHHHHHHHHhhcCCCEE----ECCCCccCHHHHHHHHHh-CCCCE
Confidence 3455665431 2356777742 2233 3467889999999887665 445666789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hHHHHHHHHHHHHcCCcEEEE
Q 015899 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~~LVE 294 (398)
...+-+.+++++.++...| +|.|.+...... -.+..++...|+..|+.+++-
T Consensus 246 a~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~ 299 (377)
T 3my9_A 246 LADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGG 299 (377)
T ss_dssp EESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEECC
T ss_pred EECCccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEecC
Confidence 9999999999998887655 889888777664 345788889999999998753
No 396
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=91.06 E-value=0.71 Score=44.81 Aligned_cols=86 Identities=14% Similarity=0.255 Sum_probs=67.8
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEec
Q 015899 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGES 353 (398)
Q Consensus 274 ~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAES 353 (398)
.+-|+.|.++++++||.++.|++|.+.++.+.++ ++++-|..++.+++. ...++.+ .+.+|+..-
T Consensus 77 ~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~--vd~lqIgA~~~~n~~----LLr~va~---------~gkPVilK~ 141 (285)
T 3sz8_A 77 DEGLKIFAEVKARFGVPVITDVHEAEQAAPVAEI--ADVLQVPAFLARQTD----LVVAIAK---------AGKPVNVKK 141 (285)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTT--CSEEEECGGGTTCHH----HHHHHHH---------TSSCEEEEC
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh--CCEEEECccccCCHH----HHHHHHc---------cCCcEEEeC
Confidence 3458889999999999999999999999999885 899999998887754 3333332 367899999
Q ss_pred CCC-CHHHH----HHHHHcCCCEEEE
Q 015899 354 GLF-TPDDI----AYVQEAGVKAVLV 374 (398)
Q Consensus 354 GI~-t~eD~----~~l~~~GadaVLV 374 (398)
|.. |++|+ +++.+.|.+-|++
T Consensus 142 G~~~t~~ei~~ave~i~~~Gn~~i~L 167 (285)
T 3sz8_A 142 PQFMSPTQLKHVVSKCGEVGNDRVML 167 (285)
T ss_dssp CTTSCGGGTHHHHHHHHHTTCCCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCcEEE
Confidence 995 88765 4456678877776
No 397
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=91.05 E-value=0.45 Score=47.88 Aligned_cols=119 Identities=12% Similarity=0.062 Sum_probs=86.8
Q ss_pred HHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE
Q 015899 164 IGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL 243 (398)
Q Consensus 164 ~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL 243 (398)
..++++.. .....|.... ..| +. ..+..++++.+++.|...| |+.+-..+++.+..+|+. +++||.
T Consensus 210 v~avR~a~--G~d~~l~vDa-----N~~-~~-~~~A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa 275 (418)
T 3r4e_A 210 FEELRKTY--GFDHHLLHDG-----HHR-YT-PQEAANLGKMLEPYQLFWL----EDCTPAENQEAFRLVRQH-TVTPLA 275 (418)
T ss_dssp HHHHHHHH--CSSSEEEEEC-----TTC-SC-HHHHHHHHHHHGGGCCSEE----ESCSCCSSGGGGHHHHHH-CCSCEE
T ss_pred HHHHHHHc--CCCCeEEEeC-----CCC-CC-HHHHHHHHHHHHhhCCCEE----ECCCCccCHHHHHHHHhc-CCCCEE
Confidence 45555543 1235666654 112 21 2245567888888887665 445556788999999987 899999
Q ss_pred eccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEcC
Q 015899 244 CKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVH 296 (398)
Q Consensus 244 ~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEVh 296 (398)
..+-+.++++..++...| +|.|.+....... .+...+...|+..|+.+++-+.
T Consensus 276 ~dE~~~~~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 330 (418)
T 3r4e_A 276 VGEIFNTIWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGP 330 (418)
T ss_dssp ECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred EcCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 999999999999888776 8999998888765 4578888999999999876654
No 398
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=91.00 E-value=0.56 Score=45.97 Aligned_cols=90 Identities=14% Similarity=0.156 Sum_probs=69.5
Q ss_pred HHHHHHHH-HHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hH
Q 015899 199 PVEIARSY-EKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DL 275 (398)
Q Consensus 199 p~~iA~aY-~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~ 275 (398)
..++++.+ ++.|. . +-+| +. +++.+..+|+. +++||...+-+.++.++.++...| +|.|.+...... -.
T Consensus 206 a~~~~~~l~~~~~i-~---iE~P-~~--~~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 277 (371)
T 2ps2_A 206 ALRLLRLLPHGLDF-A---LEAP-CA--TWRECISLRRK-TDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLT 277 (371)
T ss_dssp HHHHHHHSCTTCCC-E---EECC-BS--SHHHHHHHHTT-CCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHH
T ss_pred HHHHHHHHHhhcCC-c---CcCC-cC--CHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHH
Confidence 34556666 66664 3 3344 33 89999999986 899999999999999999887665 799999777664 35
Q ss_pred HHHHHHHHHHHcCCcEEEEcC
Q 015899 276 DIRYMTKICKLLGLTALVEVH 296 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEVh 296 (398)
+..++.+.|+..|+.+++-+.
T Consensus 278 ~~~~i~~~A~~~g~~~~~~~~ 298 (371)
T 2ps2_A 278 RGRRQRDICLAAGYSVSVQET 298 (371)
T ss_dssp HHHHHHHHHHHHTCEEEEECS
T ss_pred HHHHHHHHHHHcCCeEEecCC
Confidence 578888999999999998654
No 399
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=90.96 E-value=0.53 Score=46.57 Aligned_cols=93 Identities=6% Similarity=0.051 Sum_probs=72.6
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DL 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~ 275 (398)
+..++++.+++.|... + |+.+-..+++.++.+++. +++||...+-+.+++++.++...| +|.|.+...... -.
T Consensus 214 ~a~~~~~~l~~~~i~~---i-E~P~~~~~~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 288 (392)
T 2poz_A 214 ETIRFCRKIGELDICF---V-EEPCDPFDNGALKVISEQ-IPLPIAVGERVYTRFGFRKIFELQACGIIQPDIGTAGGLM 288 (392)
T ss_dssp HHHHHHHHHGGGCEEE---E-ECCSCTTCHHHHHHHHHH-CSSCEEECTTCCHHHHHHHHHTTTCCSEECCCTTTSSCHH
T ss_pred HHHHHHHHHHhcCCCE---E-ECCCCcccHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 3456777777776543 3 444555789999999987 899999999999999999988776 899988777664 45
Q ss_pred HHHHHHHHHHHcCCcEEEEc
Q 015899 276 DIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEV 295 (398)
+..++.+.|+..|+.+++-+
T Consensus 289 ~~~~i~~~A~~~g~~~~~h~ 308 (392)
T 2poz_A 289 ETKKICAMAEAYNMRVAPHV 308 (392)
T ss_dssp HHHHHHHHHHTTTCEECCCC
T ss_pred HHHHHHHHHHHcCCeEecCC
Confidence 57888999999999988743
No 400
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=90.93 E-value=0.19 Score=44.80 Aligned_cols=82 Identities=17% Similarity=0.050 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHcCCcEE-EEeccCCcCCC-CHHHHHHHHhcCC--CCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCC
Q 015899 198 DPVEIARSYEKGGAACL-SILTDEKYFKG-SFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aI-SVLTd~~~F~G-s~edL~~Ir~a~v--~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (398)
+|.+.++.+.+.|++.+ ...+-...|.| ++.. ..+|+. . ++|+..-.. |.+..+.++..+|||+|.++.++..
T Consensus 115 ~p~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~-~~i~~~-~~~~~pi~v~GG-I~~~~~~~~~~aGad~vvvGsaI~~ 191 (207)
T 3ajx_A 115 DKATRAQEVRALGAKFVEMHAGLDEQAKPGFDLN-GLLAAG-EKARVPFSVAGG-VKVATIPAVQKAGAEVAVAGGAIYG 191 (207)
T ss_dssp SHHHHHHHHHHTTCSEEEEECCHHHHTSTTCCTH-HHHHHH-HHHTSCEEEESS-CCGGGHHHHHHTTCSEEEESHHHHT
T ss_pred ChHHHHHHHHHhCCCEEEEEecccccccCCCchH-HHHHHh-hCCCCCEEEECC-cCHHHHHHHHHcCCCEEEEeeeccC
Confidence 67777777778899998 54333222333 2322 444443 2 688875444 5677899999999999999988875
Q ss_pred hHHHHHHHH
Q 015899 274 DLDIRYMTK 282 (398)
Q Consensus 274 ~~~L~~Li~ 282 (398)
.++..+.++
T Consensus 192 ~~dp~~~~~ 200 (207)
T 3ajx_A 192 AADPAAAAK 200 (207)
T ss_dssp SSSHHHHHH
T ss_pred CCCHHHHHH
Confidence 444444333
No 401
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=90.93 E-value=1 Score=43.56 Aligned_cols=140 Identities=16% Similarity=0.179 Sum_probs=89.7
Q ss_pred CCccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCC--------cCCCCH-HH
Q 015899 159 PARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEK--------YFKGSF-EN 229 (398)
Q Consensus 159 ~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~--------~F~Gs~-ed 229 (398)
..+.|.++++. ....|..-+|..|.. -+.+-- +..-||+..=+.--... .|.|+. +-
T Consensus 119 ~t~~~v~~~~g------~~~~i~~tRKt~Pgl-------r~l~k~-Av~~GG~~nhR~gl~d~vlikdnHi~~ag~i~~a 184 (284)
T 1qpo_A 119 ATAAWVDAVRG------TKAKIRDTRKTLPGL-------RALQKY-AVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDA 184 (284)
T ss_dssp HHHHHHHHTTT------SSCEEECCSCCCTTC-------HHHHHH-HHHHTTCBCCCCSSSSSEEECHHHHHHHSSHHHH
T ss_pred HHHHHHHHhcC------CCcEEEEecccCCCc-------hHHHhh-hhhhcCcccccccchhhhcccHhHHHHcCCHHHH
Confidence 34667776652 236899999999942 122222 22345543322111111 122443 35
Q ss_pred HHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHHHHhc
Q 015899 230 LEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLG 306 (398)
Q Consensus 230 L~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~rAl~ 306 (398)
++.+|+.....||.. +. .+..|+.+|..+|||.|+|.. .+++++++.++..+..+-.+.+|++ |++.+....+
T Consensus 185 v~~ar~~~~~~~I~V-ev-~t~eea~eal~aGaD~I~LDn--~~~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a~ 260 (284)
T 1qpo_A 185 LRAVRNAAPDLPCEV-EV-DSLEQLDAVLPEKPELILLDN--FAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAE 260 (284)
T ss_dssp HHHHHHHCTTSCEEE-EE-SSHHHHHHHGGGCCSEEEEET--CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHH
T ss_pred HHHHHHhCCCCCEEE-Ee-CCHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHHh
Confidence 666666422335554 22 256799999999999999987 7888899999888776556788886 7888888888
Q ss_pred cCCCcEEeecc
Q 015899 307 IEGIELIGINN 317 (398)
Q Consensus 307 l~Ga~iIGINn 317 (398)
. |+++|++..
T Consensus 261 t-GVD~isvG~ 270 (284)
T 1qpo_A 261 T-GVDYLAVGA 270 (284)
T ss_dssp T-TCSEEECGG
T ss_pred c-CCCEEEECH
Confidence 6 999999875
No 402
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=90.86 E-value=0.6 Score=46.22 Aligned_cols=105 Identities=10% Similarity=0.011 Sum_probs=80.1
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-----cCEEEEeccCC
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-----ADAVLLIAAVL 272 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-----ADaVLLiaaiL 272 (398)
+..++++.+++.|...| |+.+-..+++.+..+++. +++||...+-+.++.++.++...| +|.|.+.....
T Consensus 225 ~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~ 299 (392)
T 1tzz_A 225 TGIAYAKMLRDYPLFWY----EEVGDPLDYALQAALAEF-YPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALS 299 (392)
T ss_dssp HHHHHHHHHTTSCCSEE----ECCSCTTCHHHHHHHTTT-CCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTT
T ss_pred HHHHHHHHHHHcCCCee----cCCCChhhHHHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECcccc
Confidence 34567777777776654 445566789999999986 899999999999999999998887 99999987776
Q ss_pred C-hHHHHHHHHHHHHcCCc---EEEEcCCHHHHHHHhcc
Q 015899 273 P-DLDIRYMTKICKLLGLT---ALVEVHDEREMDRVLGI 307 (398)
Q Consensus 273 ~-~~~L~~Li~~a~~LGL~---~LVEVht~eEl~rAl~l 307 (398)
. -.+..++...|+..|+. +++-.-...++-.+..+
T Consensus 300 GGit~~~~i~~~A~~~gi~~~~~~~~~~~~~~~hl~aa~ 338 (392)
T 1tzz_A 300 YGLCEYQRTLEVLKTHGWSPSRCIPHGGHQMSLNIAAGL 338 (392)
T ss_dssp TCHHHHHHHHHHHHHTTCCGGGBCCSCCBHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCCceEeecHHHHHHHHHHHhC
Confidence 4 34578889999999998 66432166665555444
No 403
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=90.82 E-value=0.34 Score=48.08 Aligned_cols=107 Identities=13% Similarity=0.133 Sum_probs=78.1
Q ss_pred CceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHH
Q 015899 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIY 255 (398)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~ 255 (398)
...|..++- |-+. ..+..++++.+++.|...| |+.+-..+++.++.+++. +++||...+-+.+++++.
T Consensus 209 d~~l~vDan------~~~~-~~~ai~~~~~l~~~~i~~i----E~P~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~ 276 (403)
T 2ox4_A 209 DVDIIVENH------GHTD-LVSAIQFAKAIEEFNIFFY----EEINTPLNPRLLKEAKKK-IDIPLASGERIYSRWGFL 276 (403)
T ss_dssp TSEEEEECT------TCSC-HHHHHHHHHHHGGGCEEEE----ECCSCTTSTHHHHHHHHT-CCSCEEECTTCCHHHHHH
T ss_pred CCeEEEECC------CCCC-HHHHHHHHHHHHhhCCCEE----eCCCChhhHHHHHHHHHh-CCCCEEecCCcCCHHHHH
Confidence 466776652 2121 1234566777777765433 444556789999999987 899999999999999999
Q ss_pred HHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEE
Q 015899 256 YARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 256 eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVE 294 (398)
++...| +|.|.+....... .+..++.+.|+..|+.+++-
T Consensus 277 ~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h 317 (403)
T 2ox4_A 277 PFLEDRSIDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAH 317 (403)
T ss_dssp HHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHTTCEECCC
T ss_pred HHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 988776 8988887666543 45778889999999998873
No 404
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=90.82 E-value=0.47 Score=47.83 Aligned_cols=128 Identities=7% Similarity=-0.035 Sum_probs=91.2
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. .....|..+.- .| +. ..+..++++.+++.|...| |+.+-.++++.+..+|+. +++||
T Consensus 219 ~v~avReav--G~d~~L~vDaN-----~~-~~-~~~Ai~~~~~Le~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPI 284 (412)
T 3stp_A 219 RVEAVREVI--GYDNDLMLECY-----MG-WN-LDYAKRMLPKLAPYEPRWL----EEPVIADDVAGYAELNAM-NIVPI 284 (412)
T ss_dssp HHHHHHHHH--CSSSEEEEECT-----TC-SC-HHHHHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHT-CSSCE
T ss_pred HHHHHHHHc--CCCCeEEEECC-----CC-CC-HHHHHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHhC-CCCCE
Confidence 345555543 12356776641 12 21 2244567888888887765 455666799999999997 89999
Q ss_pred EeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEcCCHHHHHHH
Q 015899 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHDEREMDRV 304 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEVht~eEl~rA 304 (398)
...+-+.++++..++...| +|.|.+....... .+...+...|+..|+.+++-+....-+--+
T Consensus 285 a~dE~~~~~~~~~~li~~~a~D~v~ik~~~~GGit~a~kia~~A~a~gi~v~~h~~~aa~~hla 348 (412)
T 3stp_A 285 SGGEHEFSVIGCAELINRKAVSVLQYDTNRVGGITAAQKINAIAEAAQIPVIPHAGQMHNYHLT 348 (412)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHHTCCBCCSSCSHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEecChhhcCCHHHHHHHHHHHHHcCCEEEeccHHHHHHHHH
Confidence 9999999999999998775 8998888777654 457888899999999988766444444444
No 405
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=90.81 E-value=0.53 Score=47.49 Aligned_cols=119 Identities=11% Similarity=0.085 Sum_probs=86.6
Q ss_pred HHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE
Q 015899 164 IGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL 243 (398)
Q Consensus 164 ~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL 243 (398)
..++++.. .....|..+.- .| +. ..+..++++.+++.|...| |+..-..+++.+..+|+. +++||.
T Consensus 216 v~avR~av--G~d~~l~vDaN-----~~-~~-~~~A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa 281 (424)
T 3v3w_A 216 FAAVRKEF--GPDIHLLHDVH-----HR-LT-PIEAARLGKALEPYHLFWM----EDAVPAENQESFKLIRQH-TTTPLA 281 (424)
T ss_dssp HHHHHHHH--CSSSEEEEECT-----TC-CC-HHHHHHHHHHHGGGCCSEE----ECCSCCSSTTHHHHHHHH-CCSCEE
T ss_pred HHHHHHHc--CCCCcEEEeCC-----CC-CC-HHHHHHHHHHHHhcCCCEE----ECCCChHhHHHHHHHHhh-CCCCEE
Confidence 45555543 12456777631 12 21 2245567888888887665 344555788999999987 899999
Q ss_pred eccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEcC
Q 015899 244 CKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVH 296 (398)
Q Consensus 244 ~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEVh 296 (398)
..+-+.++++..++...| +|.|.+....... .+...+...|+..|+.+++-+.
T Consensus 282 ~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 336 (424)
T 3v3w_A 282 VGEVFNSIHDCRELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTGFHGA 336 (424)
T ss_dssp ECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCC
T ss_pred EccCcCCHHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 999999999999888776 8999998887765 4578888999999999876654
No 406
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=90.79 E-value=0.62 Score=44.49 Aligned_cols=56 Identities=13% Similarity=0.086 Sum_probs=44.5
Q ss_pred HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChH----HHHHHHHHHH
Q 015899 227 FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL----DIRYMTKICK 285 (398)
Q Consensus 227 ~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~----~L~~Li~~a~ 285 (398)
.+.++.+|+. +++||++...|-++.|+.++ .|||+|+.+.++.... .+++|++..+
T Consensus 191 ~~~v~~vr~~-~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~~~~~~~~~~~fv~~l~ 250 (271)
T 1ujp_A 191 KDLVRRIKAR-TALPVAVGFGVSGKATAAQA--AVADGVVVGSALVRALEEGRSLAPLLQEIR 250 (271)
T ss_dssp HHHHHHHHTT-CCSCEEEESCCCSHHHHHHH--TTSSEEEECHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHhh-cCCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHhcccchHHHHHHHHHHHH
Confidence 5788999987 79999999888889999997 8999999998876442 3555554443
No 407
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=90.77 E-value=0.22 Score=49.24 Aligned_cols=78 Identities=13% Similarity=0.077 Sum_probs=61.6
Q ss_pred CHHHHHHHHHHcCCcEEEEecc---C---CcCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEec
Q 015899 198 DPVEIARSYEKGGAACLSILTD---E---KYFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIA 269 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd---~---~~F~G-s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLia 269 (398)
+..++|+.+++. ++.|+|-.- + ..+.| ..+.+..+|+. +++||+.-..|.++.+..++...| ||.|.+.-
T Consensus 231 ~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR 308 (343)
T 3kru_A 231 MMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKR-CNIKTSAVGLITTQELAEEILSNERADLVALGR 308 (343)
T ss_dssp HHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-HTCEEEEESSCCCHHHHHHHHHTTSCSEEEESH
T ss_pred HHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHh-cCcccceeeeeeHHHHHHHHHhchhhHHHHHHH
Confidence 567889999999 999999521 0 11233 46778889987 899999999889999999999998 99999988
Q ss_pred cCCChHHH
Q 015899 270 AVLPDLDI 277 (398)
Q Consensus 270 aiL~~~~L 277 (398)
.+|.+.++
T Consensus 309 ~~lanPdl 316 (343)
T 3kru_A 309 ELLRNPYW 316 (343)
T ss_dssp HHHHCTTH
T ss_pred HHhcCCeE
Confidence 77765554
No 408
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=90.75 E-value=0.59 Score=45.78 Aligned_cols=118 Identities=15% Similarity=0.174 Sum_probs=84.0
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCH---HHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCC
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP---VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK 239 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp---~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~ 239 (398)
...++++.. .....+.... +..+++ .++++.+++.| +..+- +.+-.++++.+..+|+. ++
T Consensus 172 ~v~avR~a~--g~~~~l~vDa----------n~~~~~~~a~~~~~~L~~~~---i~~iE-qP~~~~d~~~~~~l~~~-~~ 234 (354)
T 3jva_A 172 RVKAIREAV--GFDIKLRLDA----------NQAWTPKDAVKAIQALADYQ---IELVE-QPVKRRDLEGLKYVTSQ-VN 234 (354)
T ss_dssp HHHHHHHHH--CTTSEEEEEC----------TTCSCHHHHHHHHHHTTTSC---EEEEE-CCSCTTCHHHHHHHHHH-CS
T ss_pred HHHHHHHHc--CCCCeEEEEC----------CCCCCHHHHHHHHHHHHhcC---CCEEE-CCCChhhHHHHHHHHHh-CC
Confidence 345555542 1245677764 223344 45666666665 44443 44556789999999987 89
Q ss_pred CcEEeccccCCHHHHHHHHHc-CcCEEEEeccCCC-hHHHHHHHHHHHHcCCcEEEEcCC
Q 015899 240 CPLLCKEFIVDAWQIYYARTK-GADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEVHD 297 (398)
Q Consensus 240 lPVL~KDFIid~~QI~eAr~~-GADaVLLiaaiL~-~~~L~~Li~~a~~LGL~~LVEVht 297 (398)
+||...+-+.+++++.+.... ++|.|.+...... -.+..++...|+..|+.+++-+..
T Consensus 235 iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 235 TTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCMA 294 (354)
T ss_dssp SEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred CCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 999999999999999888765 5799999877764 355788999999999999876543
No 409
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=90.74 E-value=12 Score=35.68 Aligned_cols=160 Identities=16% Similarity=0.106 Sum_probs=95.6
Q ss_pred HHHHHHHHH-cCCcEEEEe-ccCCcCCCCHH-HHHHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEe
Q 015899 200 VEIARSYEK-GGAACLSIL-TDEKYFKGSFE-NLEAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLI 268 (398)
Q Consensus 200 ~~iA~aY~~-~GA~aISVL-Td~~~F~Gs~e-dL~~I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLi 268 (398)
.++++.+.+ .|+++|-++ |--+++.=+.+ ..+.+ ++. .-.+||+..=.-.+.. +...|..+|||+|++.
T Consensus 27 ~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 106 (293)
T 1f6k_A 27 RQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAV 106 (293)
T ss_dssp HHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 455666778 999999887 22222222333 32222 222 2369999654433433 2345667899999998
Q ss_pred ccCC---ChHH-HHHHHHHHHHcCCcEEEE-------c-CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhh
Q 015899 269 AAVL---PDLD-IRYMTKICKLLGLTALVE-------V-HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEG 336 (398)
Q Consensus 269 aaiL---~~~~-L~~Li~~a~~LGL~~LVE-------V-ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~ 336 (398)
.-.. +++. .+++-..|...++.+++= + -+.+.+.+..+. ..++||-.. .-|+....+++..
T Consensus 107 ~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiK~s-----~gd~~~~~~~~~~ 179 (293)
T 1f6k_A 107 TPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYKN--PKVLGVKFT-----AGDFYLLERLKKA 179 (293)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHTS--TTEEEEEEC-----SCCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhcC--CCEEEEEEC-----CCCHHHHHHHHHh
Confidence 8764 4444 445555666778877552 1 155666665554 579999732 2466666777653
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccc
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 377 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 377 (398)
..+..+.+ |-. +.+.....+|++|++-|.+
T Consensus 180 -------~~~f~v~~--G~d--~~~~~~l~~G~~G~is~~~ 209 (293)
T 1f6k_A 180 -------YPNHLIWA--GFD--EMMLPAASLGVDGAIGSTF 209 (293)
T ss_dssp -------CTTSEEEE--CCG--GGHHHHHHTTCSEEEESTH
T ss_pred -------CCCeEEEE--CcH--HHHHHHHHCCCcEEEeCHH
Confidence 12444433 332 2355667789999998875
No 410
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=90.73 E-value=6.3 Score=37.11 Aligned_cols=169 Identities=18% Similarity=0.147 Sum_probs=92.6
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhc--CCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a--~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~ 275 (398)
+|. .++.....||++|-+ +.++. -.+.+.+....++ ....|++.+=.-.++.+|..+...|+|.|++ -.+-+.+
T Consensus 28 ~p~-~~e~a~~~GaD~v~l-DlE~~-~~~~~~~~~~~~a~~~~~~~~~VRv~~~~~~~i~~~l~~g~~~I~~-P~V~s~e 103 (267)
T 2vws_A 28 TAY-MAEIAATSGYDWLLI-DGEHA-PNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLI-PMVDTAE 103 (267)
T ss_dssp CHH-HHHHHHTTCCSEEEE-ETTTS-CCCHHHHHHHHHHHTTSSSEEEEECSSCCHHHHHHHHHTTCCEEEE-CCCCSHH
T ss_pred CHH-HHHHHHhCCCCEEEE-cCCCC-CCCHHHHHHHHHHHHhCCCcEEEEeCCCCHHHHHHHHHhCCCEEEe-CCCCCHH
Confidence 444 445556779998755 33332 2344554443221 1245554322245799999999999998877 5666777
Q ss_pred HHHHHHHHHHH-------------------------------cCCcEEEEcC-CHHHHHHHhccCCCcEEeeccccCcc-
Q 015899 276 DIRYMTKICKL-------------------------------LGLTALVEVH-DEREMDRVLGIEGIELIGINNRNLET- 322 (398)
Q Consensus 276 ~L~~Li~~a~~-------------------------------LGL~~LVEVh-t~eEl~rAl~l~Ga~iIGINnRdL~t- 322 (398)
+++.+++.++. ..+-+++|+. -.+.++..+..+|.+.+-|..-||..
T Consensus 104 e~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~~~~eIa~~~gvd~l~iG~~DL~~~ 183 (267)
T 2vws_A 104 QARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSAS 183 (267)
T ss_dssp HHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHHTHHHHHTSTTCCEEEECHHHHHHH
T ss_pred HHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHHHHHHHhCCCCCCEEEEChHHHHHH
Confidence 88888776531 2233455553 11222333333466766555444421
Q ss_pred c----ccC---hhhH-HHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccc
Q 015899 323 F----EVD---NSNT-KKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 377 (398)
Q Consensus 323 f----~vD---l~~t-~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 377 (398)
+ ..+ +... .+++...+. .++.+..- ..+++.+..+...|++.+.+|.-
T Consensus 184 lg~~~~~~~p~v~~a~~~iv~aa~a-----aG~~~~v~--~~d~~~a~~~~~~G~~~~s~~~d 239 (267)
T 2vws_A 184 LGYPDNAGHPEVQRIIETSIRRIRA-----AGKAAGFL--AVAPDMAQQCLAWGANFVAVGVD 239 (267)
T ss_dssp TTCSSSCCTHHHHHHHHHHHHHHHH-----TTCEEEEE--CSSHHHHHHHHHTTCCEEEEEEH
T ss_pred hCCCCCCCCHHHHHHHHHHHHHHHH-----hCCeEEEe--cCCHHHHHHHHHCCCCEEEEchH
Confidence 1 111 1111 223332222 23322212 24899999999999999999963
No 411
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=90.66 E-value=2.8 Score=37.81 Aligned_cols=194 Identities=16% Similarity=0.124 Sum_probs=107.4
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHH-hcCCCCcEEe--ccccC-CH-----------HHHHHHHHc
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVR-SAGVKCPLLC--KEFIV-DA-----------WQIYYARTK 260 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir-~a~v~lPVL~--KDFIi-d~-----------~QI~eAr~~ 260 (398)
..+..+..+...+.|.++|-+..++ +...+.+.++... +.++.+..++ .+|.- ++ ..|..|...
T Consensus 17 ~~~~~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~l 95 (275)
T 3qc0_A 17 QCGFAEAVDICLKHGITAIAPWRDQ-VAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAEL 95 (275)
T ss_dssp TCCHHHHHHHHHHTTCCEEECBHHH-HHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHcCCCEEEecccc-ccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 4566677777777777777764321 1112333333332 2222222222 12221 11 136678899
Q ss_pred CcCEEEEeccCCC-------------hHHHHHHHHHHHHcCCcEEEEcC------------CHHHHHHHhccCCCcEEee
Q 015899 261 GADAVLLIAAVLP-------------DLDIRYMTKICKLLGLTALVEVH------------DEREMDRVLGIEGIELIGI 315 (398)
Q Consensus 261 GADaVLLiaaiL~-------------~~~L~~Li~~a~~LGL~~LVEVh------------t~eEl~rAl~l~Ga~iIGI 315 (398)
||..|.+.....+ -+.|.++.++|++.|+...+|-+ |.+++.+.++.-+. -+|+
T Consensus 96 G~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~vg~ 174 (275)
T 3qc0_A 96 GADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNTLGQALDICETLGP-GVGV 174 (275)
T ss_dssp TCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTBSCCCHHHHHHHHHHHCT-TEEE
T ss_pred CCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCCcccCCccccCCHHHHHHHHHHhCc-ccEE
Confidence 9999988764332 13377788888889999999964 56777766654244 5777
Q ss_pred ccccCccc--ccChhhHH-HHhh--hhccccccc---------CCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC-
Q 015899 316 NNRNLETF--EVDNSNTK-KLLE--GERGEIIRQ---------KNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK- 380 (398)
Q Consensus 316 NnRdL~tf--~vDl~~t~-~L~~--~i~~~~i~~---------~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk- 380 (398)
+ -|...+ ..|+.... ++.+ .+.--.+.. .+...+.+|-|.=.+-++.+.+.|+++.++=|..-.
T Consensus 175 ~-~D~~h~~~~~d~~~~l~~~~~~~~i~~vH~~D~~~~~~~~~~~r~~~G~G~id~~~~~~~L~~~gy~g~~~~E~~~~~ 253 (275)
T 3qc0_A 175 A-IDVYHVWWDPDLANQIARAGKMKAILAHHICDWLVPTKDMLTDRGMMGDGVIDLKGIRRRIEAAGFHGAQEVEIFSAD 253 (275)
T ss_dssp E-EEHHHHTTCTTHHHHHHHHHHTTCEEEEEECBCCSSCCCSSSBCBCTTSSCCCHHHHHHHHHHTTCCCCEEECCCBTT
T ss_pred E-EEhhhheeCCCHHHHHHHcCccceEEEEEecCCCCCcccccCCCcCCCCCccCHHHHHHHHHHcCCCceEEEEecCcc
Confidence 5 111111 23433332 2321 221111111 011234556666666778888999999888887655
Q ss_pred ---CCChHHHHHhhh
Q 015899 381 ---QDDPGKGITGLF 392 (398)
Q Consensus 381 ---~~dp~~~i~~L~ 392 (398)
..||.+.++.-+
T Consensus 254 ~~~~~~~~~~~~~~~ 268 (275)
T 3qc0_A 254 NWWKRPADEVIATCV 268 (275)
T ss_dssp TGGGSCHHHHHHHHH
T ss_pred ccccCCHHHHHHHHH
Confidence 468888877654
No 412
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=90.61 E-value=0.59 Score=46.01 Aligned_cols=93 Identities=12% Similarity=0.087 Sum_probs=72.9
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCChHH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPDLD 276 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~~~ 276 (398)
+..++++.+++.|...| |+.+-..+++.+..+|+. +++||...+-+.+++++.++...| +|.|.+......-.+
T Consensus 200 ~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~Git~ 274 (367)
T 3dg3_A 200 ESLRAMREMADLDLLFA----EELCPADDVLSRRRLVGQ-LDMPFIADESVPTPADVTREVLGGSATAISIKTARTGFTG 274 (367)
T ss_dssp HHHHHHHHTTTSCCSCE----ESCSCTTSHHHHHHHHHH-CSSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHHTTHH
T ss_pred HHHHHHHHHHHhCCCEE----ECCCCcccHHHHHHHHHh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhhhHHH
Confidence 34456777777775544 344556789999999987 899999999999999999887766 899999776544456
Q ss_pred HHHHHHHHHHcCCcEEEEc
Q 015899 277 IRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 277 L~~Li~~a~~LGL~~LVEV 295 (398)
..++...|+..|+.+++-.
T Consensus 275 ~~~ia~~A~~~gi~~~~~~ 293 (367)
T 3dg3_A 275 STRVHHLAEGLGLDMVMGN 293 (367)
T ss_dssp HHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHHHcCCeEEECC
Confidence 7888999999999988753
No 413
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=90.58 E-value=2.8 Score=40.59 Aligned_cols=140 Identities=14% Similarity=0.110 Sum_probs=88.9
Q ss_pred CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHH
Q 015899 226 SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMD 302 (398)
Q Consensus 226 s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~ 302 (398)
++..|+.+++. ..+|++.-= .|+.++..+... +|.+-+.+.-+.+.+ |++.+..+|..+++.-. +.+|+.
T Consensus 79 GL~~L~~~~~e-~Glp~~Tev--~d~~~v~~l~~~-vd~lqIgA~~~~n~~---LLr~va~~gkPVilK~G~~~t~~ei~ 151 (285)
T 3sz8_A 79 GLKIFAEVKAR-FGVPVITDV--HEAEQAAPVAEI-ADVLQVPAFLARQTD---LVVAIAKAGKPVNVKKPQFMSPTQLK 151 (285)
T ss_dssp HHHHHHHHHHH-HCCCEEEEC--CSGGGHHHHHTT-CSEEEECGGGTTCHH---HHHHHHHTSSCEEEECCTTSCGGGTH
T ss_pred HHHHHHHHHHh-cCCeEEEEe--CCHHHHHHHHHh-CCEEEECccccCCHH---HHHHHHccCCcEEEeCCCCCCHHHHH
Confidence 35566677665 789999654 588888888888 999988887776643 55556678999998875 667776
Q ss_pred HHhcc---CCCcEEeec----cccCcccccChhhHHHHhhhhcccccccCCceEEEe-c--------------CCCC--H
Q 015899 303 RVLGI---EGIELIGIN----NRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGE-S--------------GLFT--P 358 (398)
Q Consensus 303 rAl~l---~Ga~iIGIN----nRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAE-S--------------GI~t--~ 358 (398)
.|++. .|.+-|.+- ++.+.+..+|+.....|.+.. .+++|+.- + |-.. +
T Consensus 152 ~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~-------~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~ 224 (285)
T 3sz8_A 152 HVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETT-------GGCPVIFDVTHSLQCRDPLGDASGGRRRQVL 224 (285)
T ss_dssp HHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHT-------TSCCEEEETTTTCC---------------HH
T ss_pred HHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhC-------CCCCEEEeCCCccccCCCcCCCCCCchhhHH
Confidence 66442 254422222 234555667887765554431 13566552 1 2110 3
Q ss_pred HHHHHHHHcCCCEEEEccccc
Q 015899 359 DDIAYVQEAGVKAVLVGESIV 379 (398)
Q Consensus 359 eD~~~l~~~GadaVLVGeaLm 379 (398)
.-......+||||++|-.-+.
T Consensus 225 ~~a~AAvA~GA~gl~IE~H~~ 245 (285)
T 3sz8_A 225 DLARAGIAVGIAGLFLEAHPD 245 (285)
T ss_dssp HHHHHHHHHCCSEEEEEEESC
T ss_pred HHHHHHHHhCCCEEEEEeccC
Confidence 345566788999999976544
No 414
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=90.54 E-value=7 Score=36.44 Aligned_cols=134 Identities=16% Similarity=0.065 Sum_probs=78.5
Q ss_pred HHHHHHcCcCEEEEeccCCC---------------h-------HHHHHHHHHHHHcCCcEEEEcC------CHHHHHHHh
Q 015899 254 IYYARTKGADAVLLIAAVLP---------------D-------LDIRYMTKICKLLGLTALVEVH------DEREMDRVL 305 (398)
Q Consensus 254 I~eAr~~GADaVLLiaaiL~---------------~-------~~L~~Li~~a~~LGL~~LVEVh------t~eEl~rAl 305 (398)
+..|...||..|.+...... + +.|.++.++|++.|+.+.+|.| +.+++.+.+
T Consensus 117 i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~ll 196 (340)
T 2zds_A 117 ARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRAL 196 (340)
T ss_dssp HHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEECCTTSSCCSHHHHHHHH
T ss_pred HHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEcCCCcccCCHHHHHHHH
Confidence 66788999999988543210 1 1356667778889999999986 677777777
Q ss_pred ccCC-CcEEeeccccCcc---cccChhhHHH-HhhhhcccccccCCc--------------------------eEEEecC
Q 015899 306 GIEG-IELIGINNRNLET---FEVDNSNTKK-LLEGERGEIIRQKNI--------------------------IVVGESG 354 (398)
Q Consensus 306 ~l~G-a~iIGINnRdL~t---f~vDl~~t~~-L~~~i~~~~i~~~~v--------------------------~vVAESG 354 (398)
+.-+ .+-+|++ -|... ...|+....+ +.+.+..-.+ .+. ..+.+|-
T Consensus 197 ~~v~~~~~vg~~-~D~~H~~~~g~d~~~~l~~~~~~i~~vHl--~D~~~~~~~~~g~~~~~~~~~~~~r~~~~~~~G~G~ 273 (340)
T 2zds_A 197 EAVGHRPAFGLN-FDPSHFVWQDLDPVGFLWDFRDRIYHVDC--KEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGD 273 (340)
T ss_dssp HHTTTCTTEEEE-ECCHHHHHTTCCHHHHHHHTGGGEEEEEE--CEEEECCCSSSCTTCTTCCTTCTTSSEEEECTTSSC
T ss_pred HhcCCCCCeeEE-EchhhHHHhCCCHHHHHHHHHhhEEEEEe--ccCccccccccccccccCCcccccccceecCCCCCc
Confidence 6424 3457776 22211 1335433333 2222111001 111 1233455
Q ss_pred CCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHh
Q 015899 355 LFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITG 390 (398)
Q Consensus 355 I~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~ 390 (398)
|.=.+-++.+.+.|+++.++=|..-...+|...+++
T Consensus 274 id~~~i~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~ 309 (340)
T 2zds_A 274 VPWEDVFRMLRSIDYQGPVSVEWEDAGMDRLQGAPE 309 (340)
T ss_dssp CCHHHHHHHHHHTTCCSCEEECCCCTTSCHHHHHHH
T ss_pred cCHHHHHHHHHhcCCCccEEEEeeCCCcCHHHHHHH
Confidence 555566777888999998888865545667555443
No 415
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=90.53 E-value=13 Score=35.86 Aligned_cols=164 Identities=15% Similarity=0.176 Sum_probs=98.0
Q ss_pred HHHHHHHHHHcCCcEEEEe-ccCCcCCCCHHHHHHH----Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEe
Q 015899 199 PVEIARSYEKGGAACLSIL-TDEKYFKGSFENLEAV----RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLI 268 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL~~I----r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLi 268 (398)
..++++.+.+.|+++|-++ |--+++.=+.+.-..+ ++. .-.+||+..=.- +.. +...|..+|||+|++.
T Consensus 35 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A~~~Gadavlv~ 113 (314)
T 3d0c_A 35 LDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY-SVDTAIELGKSAIDSGADCVMIH 113 (314)
T ss_dssp HHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHHHHcCCCEEEEC
Confidence 3455677788999999886 3333333344333222 322 236899964433 332 2445678899999998
Q ss_pred ccCC---ChHH-HHHHHHHHHHcCCcEEEEcC----CHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhccc
Q 015899 269 AAVL---PDLD-IRYMTKICKLLGLTALVEVH----DEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGE 340 (398)
Q Consensus 269 aaiL---~~~~-L~~Li~~a~~LGL~~LVEVh----t~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~ 340 (398)
.-.. +++. .+++-..|...++.+++=-. +.+.+.+..+. ..++||-.. .-|+....+++...
T Consensus 114 ~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~tg~l~~~~~~~La~~--pnIvgiKds-----sgd~~~~~~~~~~~--- 183 (314)
T 3d0c_A 114 QPVHPYITDAGAVEYYRNIIEALDAPSIIYFKDAHLSDDVIKELAPL--DKLVGIKYA-----INDIQRVTQVMRAV--- 183 (314)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHHSSSCEEEEECCTTSCTHHHHHHTTC--TTEEEEEEC-----CCCHHHHHHHHHHS---
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCHHHHHHHHcC--CCEEEEEeC-----CCCHHHHHHHHHhc---
Confidence 8754 4555 44555667777887765212 34555555443 579999732 23677777776642
Q ss_pred ccccC--CceEEEecCCCCHH-HHHHHHHcCCCEEEEcccccC
Q 015899 341 IIRQK--NIIVVGESGLFTPD-DIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 341 ~i~~~--~v~vVAESGI~t~e-D~~~l~~~GadaVLVGeaLmk 380 (398)
+. +..+. +|- -+ .+.....+|++|++-|.+=+-
T Consensus 184 ---~~~~~f~v~--~G~--d~~~~~~~l~~G~~G~is~~an~~ 219 (314)
T 3d0c_A 184 ---PKSSNVAFI--CGT--AEKWAPFFYHAGAVGFTSGLVNVF 219 (314)
T ss_dssp ---CGGGCCEEE--ETT--HHHHHHHHHHHTCCEEEESGGGTC
T ss_pred ---CCCCCEEEE--EeC--cHHHHHHHHHcCCCEEEecHHHhh
Confidence 22 43343 343 12 355666789999999887553
No 416
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=90.50 E-value=1.1 Score=43.42 Aligned_cols=93 Identities=18% Similarity=0.215 Sum_probs=72.7
Q ss_pred CHHHHHHHHHHcCCc--EEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh
Q 015899 198 DPVEIARSYEKGGAA--CLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD 274 (398)
Q Consensus 198 dp~~iA~aY~~~GA~--aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~ 274 (398)
+..++++.+++.|.. .| |+.+-..+++.++.+|+. +++||...+-+.+++++.+....| +|.|.+...- ..
T Consensus 197 ~a~~~~~~l~~~~i~~~~i----E~P~~~~~~~~~~~l~~~-~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GG 270 (345)
T 2zad_A 197 EAVEFARAVYQKGIDIAVY----EQPVRREDIEGLKFVRFH-SPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMK-SG 270 (345)
T ss_dssp HHHHHHHHHHHTTCCCSEE----ECCSCTTCHHHHHHHHHH-SSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHH-HH
T ss_pred HHHHHHHHHHhcCCCeeee----eCCCCcccHHHHHHHHHh-CCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEeccc-cc
Confidence 445678888888866 43 344556789999999987 899999999999999999887766 8888886655 43
Q ss_pred -HHHHHHHHHHHHcCCcEEEEcC
Q 015899 275 -LDIRYMTKICKLLGLTALVEVH 296 (398)
Q Consensus 275 -~~L~~Li~~a~~LGL~~LVEVh 296 (398)
.+...+.+.|+..|+.+++-+.
T Consensus 271 it~~~~i~~~A~~~g~~~~~~~~ 293 (345)
T 2zad_A 271 ISDALAIVEIAESSGLKLMIGCM 293 (345)
T ss_dssp HHHHHHHHHHHHTTTCEEEECCS
T ss_pred HHHHHHHHHHHHHcCCeEEEecC
Confidence 3467788889999999887654
No 417
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=90.50 E-value=0.79 Score=45.85 Aligned_cols=91 Identities=12% Similarity=0.114 Sum_probs=73.6
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DL 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~ 275 (398)
+..++++.+++.|...| |+..-.++++.+..+|+. +++||...+-+.++++..++...| +|.|.+...... -.
T Consensus 223 ~A~~~~~~l~~~~i~~i----EeP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit 297 (404)
T 4e5t_A 223 GAKRLARRLEAYDPLWF----EEPIPPEKPEDMAEVARY-TSIPVATGERLCTKYEFSRVLETGAASILQMNLGRVGGLL 297 (404)
T ss_dssp HHHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-CSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTSSCHH
T ss_pred HHHHHHHHHhhcCCcEE----ECCCCcccHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCccccCCHH
Confidence 44567888888887665 344556789999999997 899999999999999998887766 799998888774 35
Q ss_pred HHHHHHHHHHHcCCcEEE
Q 015899 276 DIRYMTKICKLLGLTALV 293 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LV 293 (398)
+...+...|+..|+.++.
T Consensus 298 ~~~~ia~~A~~~gi~~~~ 315 (404)
T 4e5t_A 298 EAKKIAAMAECHSAQIAP 315 (404)
T ss_dssp HHHHHHHHHHHTTCEECC
T ss_pred HHHHHHHHHHHcCCEEee
Confidence 578888999999999753
No 418
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=90.49 E-value=4.2 Score=41.85 Aligned_cols=172 Identities=17% Similarity=0.144 Sum_probs=103.6
Q ss_pred HHHHHHHHcCCcEEEEeccC--CcCCC----CHHHHHHH----HhcCCCCc----EEeccccCC---------------H
Q 015899 201 EIARSYEKGGAACLSILTDE--KYFKG----SFENLEAV----RSAGVKCP----LLCKEFIVD---------------A 251 (398)
Q Consensus 201 ~iA~aY~~~GA~aISVLTd~--~~F~G----s~edL~~I----r~a~v~lP----VL~KDFIid---------------~ 251 (398)
.+.++.++.++..|=-.|.. ++|+| .++++..+ .+. .++| +|.-|-.-+ .
T Consensus 36 Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~-~~vPv~pV~LhlDHg~~~~w~~~~~~~am~~a~ 114 (450)
T 3txv_A 36 AAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRFVGAIADR-IEFPREKILLGGDHLGPNPWKHLPADEAMAKAE 114 (450)
T ss_dssp HHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHHHHHHHHH-TTCCGGGEEEEEEEESSGGGTTSCHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHHHHHHHHH-cCcCcccEEEECCCCCCcccccccHHHHHHHHH
Confidence 34455555555555444443 22323 23444332 222 5778 688887755 5
Q ss_pred HHHHHHHHcCcCEEEEeccCCC--------h----HHHHHHHHHHHHc----CCc-EEE-------------------Ec
Q 015899 252 WQIYYARTKGADAVLLIAAVLP--------D----LDIRYMTKICKLL----GLT-ALV-------------------EV 295 (398)
Q Consensus 252 ~QI~eAr~~GADaVLLiaaiL~--------~----~~L~~Li~~a~~L----GL~-~LV-------------------EV 295 (398)
..|.++..+|=.-|.++++.++ + +..++|+++|+.. |.. +-. ++
T Consensus 115 e~i~~aI~AGFtSVMiD~S~~p~eeNi~lt~evva~rtaeL~~~A~~~~~~~g~~e~~yviGtEvpvpGGa~~~~~~~~~ 194 (450)
T 3txv_A 115 AMITAYAKAGFTKLHLDTSMGCAGEPTALPDATTAARAARLAAVAEDAVGGRGGVLPVYIIGTEVPIPGGALEELDTLEV 194 (450)
T ss_dssp HHHHHHHTTTCCEEEECCCBCCSSSCSBCCHHHHHHHHHHHHHHHHHTC------CCEEEEECC-------------CCC
T ss_pred HHHHHHHHcCCCEEEECCCCCchhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeeeecCCCCccccccccCCC
Confidence 6788999999999999999873 2 2357788888863 222 111 24
Q ss_pred CCHHHHHHHhcc-------CCC-----cEEeec------cccCcccccChhhHHHHhhhhcccccccCCce-EEEecC--
Q 015899 296 HDEREMDRVLGI-------EGI-----ELIGIN------NRNLETFEVDNSNTKKLLEGERGEIIRQKNII-VVGESG-- 354 (398)
Q Consensus 296 ht~eEl~rAl~l-------~Ga-----~iIGIN------nRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~-vVAESG-- 354 (398)
.+.+++++-++. .|. .++|+- --+-.....|++...+|...+ .+.+ +|.+||
T Consensus 195 T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~~~~L~~~v-------~~~P~LVlhghSt 267 (450)
T 3txv_A 195 TAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRARAEKLSATL-------GQLHGMVFEAHST 267 (450)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTTTSHHHHGG-------GTSTTCEEEESCC
T ss_pred CCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHHHHHHHHHh-------ccCCCEEEecCCC
Confidence 566777665541 133 244442 101112345677777776652 2344 555554
Q ss_pred -CCCHHHHHHHHHcCCCEEEEcccccC
Q 015899 355 -LFTPDDIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 355 -I~t~eD~~~l~~~GadaVLVGeaLmk 380 (398)
..+.++++++.+.|+..+=||..|+-
T Consensus 268 Dy~~~e~l~~~V~~GiaklNVgp~Lt~ 294 (450)
T 3txv_A 268 DYQTPDALRELVADGFAILKVGPGLTF 294 (450)
T ss_dssp TTCCHHHHHHHHHTTEEEEEECHHHHH
T ss_pred CCCCHHHHHHHHHcCCcEEEEChHHHH
Confidence 36899999999999999999988874
No 419
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=90.47 E-value=0.53 Score=45.15 Aligned_cols=44 Identities=25% Similarity=0.120 Sum_probs=38.0
Q ss_pred HHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCC
Q 015899 228 ENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 228 edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (398)
+.++.+|+. +++||++.-.|-++.|+.++...|||+|+.+.++.
T Consensus 198 ~~v~~vr~~-~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv 241 (271)
T 3nav_A 198 ALLERLQQF-DAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVV 241 (271)
T ss_dssp HHHHHHHHT-TCCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 568888987 79999986666689999989999999999988764
No 420
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=90.46 E-value=0.67 Score=46.53 Aligned_cols=93 Identities=6% Similarity=0.045 Sum_probs=74.6
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-H
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-L 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~ 275 (398)
+..++++.+++.|...| |+..-..+++.+..+|+. +++||...+-+.+++++.++...| +|.|.+....... .
T Consensus 193 ~A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~~~GGit 267 (405)
T 3rr1_A 193 MAKVLIKELEPYRPLFI----EEPVLAEQAETYARLAAH-THLPIAAGERMFSRFDFKRVLEAGGVSILQPDLSHAGGIT 267 (405)
T ss_dssp HHHHHHHHHGGGCCSCE----ECSSCCSSTHHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHHCCCSEECCBTTTTTHHH
T ss_pred HHHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHhc-CCCCEEecCCcCCHHHHHHHHHHhCCCeEEEChhhcCCHH
Confidence 34567888888886665 444556789999999986 899999999999999998887664 8999998887764 4
Q ss_pred HHHHHHHHHHHcCCcEEEEc
Q 015899 276 DIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEV 295 (398)
+...+...|+..|+.+++-+
T Consensus 268 ea~kia~lA~~~gi~v~~h~ 287 (405)
T 3rr1_A 268 ECVKIAAMAEAYDVALAPHC 287 (405)
T ss_dssp HHHHHHHHHHTTTCEECCBC
T ss_pred HHHHHHHHHHHcCCEEEeCC
Confidence 57888899999999987543
No 421
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=90.37 E-value=5.9 Score=36.81 Aligned_cols=181 Identities=12% Similarity=-0.033 Sum_probs=100.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhc--CCCCcEEe-c----c-ccC--CH-----------HHHH
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLC-K----E-FIV--DA-----------WQIY 255 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a--~v~lPVL~-K----D-FIi--d~-----------~QI~ 255 (398)
.+..+ .+...+.|..+|-+.....+ .-...++..+++. ...+.+.. - + .+. ++ ..+.
T Consensus 37 ~~l~~-l~~~~~~G~~~vEl~~~~~~-~~~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~ 114 (309)
T 2hk0_A 37 KFGPY-IEKVAKLGFDIIEVAAHHIN-EYSDAELATIRKSAKDNGIILTAGIGPSKTKNLSSEDAAVRAAGKAFFERTLS 114 (309)
T ss_dssp CSHHH-HHHHHHTTCSEEEEEHHHHT-TSCHHHHHHHHHHHHHTTCEEEEECCCCSSSCSSCSCHHHHHHHHHHHHHHHH
T ss_pred ccHHH-HHHHHHhCCCEEEeccCCcc-ccchhhHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 46667 77778889999888764321 1111344444321 02444432 1 1 112 22 1366
Q ss_pred HHHHcCcCEEEEec----cCC-----Ch--------HHHHHHHHHHHHcCCcEEEEcC---------CHHHHHHHhccCC
Q 015899 256 YARTKGADAVLLIA----AVL-----PD--------LDIRYMTKICKLLGLTALVEVH---------DEREMDRVLGIEG 309 (398)
Q Consensus 256 eAr~~GADaVLLia----aiL-----~~--------~~L~~Li~~a~~LGL~~LVEVh---------t~eEl~rAl~l~G 309 (398)
.|...||..|..-. ... +. +.|.++.++|...|+.+.+|.| +.+++.+.++.-+
T Consensus 115 ~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v~ 194 (309)
T 2hk0_A 115 NVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVLNRFENHVLNTAAEGVAFVKDVG 194 (309)
T ss_dssp HHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHHHHT
T ss_pred HHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEeecccccccccCCHHHHHHHHHHcC
Confidence 77889999998532 111 21 2366777778889999999998 5777777665324
Q ss_pred CcEEeeccccCc---ccccChhhHH-HHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015899 310 IELIGINNRNLE---TFEVDNSNTK-KLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 310 a~iIGINnRdL~---tf~vDl~~t~-~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 380 (398)
.+-+|++ -|.. ....|+.... .+.+.+..-.+...+...+.+|-|.-.+-++.+.+.|+++.++=|....
T Consensus 195 ~~~vg~~-~D~~H~~~~g~d~~~~l~~~~~~i~~vHl~D~~r~~~G~G~id~~~~~~~L~~~gy~g~i~lE~~~~ 268 (309)
T 2hk0_A 195 KNNVKVM-LDTFHMNIEEDSFGDAIRTAGPLLGHFHTGESNRRVPGKGRMPWHEIGLALRDINYTGAVIMEPFVK 268 (309)
T ss_dssp CTTEEEE-EEHHHHHHHCSCHHHHHHHHGGGEEEEEECCTTSCCTTSSCCCHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred CCCeEEE-EehhhHhhcCcCHHHHHHHHHhhEEEEEeCCCCCCCCcCCccCHHHHHHHHHHcCCCCcEEEEecCC
Confidence 4567776 1221 1133543333 2323221111111111233456666666778888999999988887665
No 422
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=90.31 E-value=0.5 Score=47.25 Aligned_cols=75 Identities=17% Similarity=0.082 Sum_probs=58.6
Q ss_pred CHHHHHHHHHHcCCcEEEEecc---CCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC
Q 015899 198 DPVEIARSYEKGGAACLSILTD---EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP 273 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd---~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~ 273 (398)
+..++|+.+++.|++.|+|-.- +..+. .+ +..+|+. +++||+.-..| ++.+..++...| ||.|.+.-.++.
T Consensus 267 ~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~--~~-~~~ir~~-~~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~ 341 (379)
T 3aty_A 267 LTKHLCKKIEPLSLAYLHYLRGDMVNQQIG--DV-VAWVRGS-YSGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIA 341 (379)
T ss_dssp HHHHHHHHHGGGCCSEEEEECSCTTSCCCC--CH-HHHHHTT-CCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEcCCCcCCCCcc--HH-HHHHHHH-CCCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHh
Confidence 3577899999999999999641 11121 25 8899987 89999987766 899999999988 999999877775
Q ss_pred hHHH
Q 015899 274 DLDI 277 (398)
Q Consensus 274 ~~~L 277 (398)
+.++
T Consensus 342 ~P~l 345 (379)
T 3aty_A 342 NPDL 345 (379)
T ss_dssp CTTH
T ss_pred CcHH
Confidence 5454
No 423
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=90.31 E-value=0.67 Score=45.80 Aligned_cols=91 Identities=13% Similarity=0.114 Sum_probs=70.6
Q ss_pred HHHHHHHHHHc-CCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-H
Q 015899 199 PVEIARSYEKG-GAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-L 275 (398)
Q Consensus 199 p~~iA~aY~~~-GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~ 275 (398)
..++++..++. |... + |+.+-..+++.+..+++. +++||...+-+.++.++.++...| +|.|.+....... .
T Consensus 200 a~~~~~~l~~~~~i~~---i-EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 274 (382)
T 2gdq_A 200 AFKWERYFSEWTNIGW---L-EEPLPFDQPQDYAMLRSR-LSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGID 274 (382)
T ss_dssp HHTTHHHHTTCSCEEE---E-ECCSCSSCHHHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHH
T ss_pred HHHHHHHHhhccCCeE---E-ECCCCcccHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 34456666666 5443 3 444556789999999986 899999999999999999888765 8999888777754 4
Q ss_pred HHHHHHHHHHHcCCcEEEE
Q 015899 276 DIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVE 294 (398)
+..++...|+..|+.+++-
T Consensus 275 ~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 275 EFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp HHHHHHHHHHHHTCEECCC
T ss_pred HHHHHHHHHHHcCCEEeec
Confidence 5778889999999997765
No 424
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=90.26 E-value=1.1 Score=44.51 Aligned_cols=117 Identities=15% Similarity=0.084 Sum_probs=87.0
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. ....+..+.- |-+. ..+..++++.+++.|...| |+.+-..+++.+..+|+. +++||
T Consensus 182 ~v~avR~a~---~~~~l~vDan------~~~~-~~~A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 246 (385)
T 3i6e_A 182 RLELIARDF---PEFRVRVDYN------QGLE-IDEAVPRVLDVAQFQPDFI----EQPVRAHHFELMARLRGL-TDVPL 246 (385)
T ss_dssp HHHHHHHHC---TTSEEEEECT------TCCC-GGGHHHHHHHHHTTCCSCE----ECCSCTTCHHHHHHHHTT-CSSCE
T ss_pred HHHHHHHhC---CCCeEEEECC------CCCC-HHHHHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHHh-CCCCE
Confidence 345555543 2456777752 2222 2356788999999886655 455666789999999986 89999
Q ss_pred EeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEE
Q 015899 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVE 294 (398)
...+-+.+.+++.++...| +|.|.+....... .+..++...|+..|+.+++-
T Consensus 247 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~ 300 (385)
T 3i6e_A 247 LADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGG 300 (385)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred EEeCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEeC
Confidence 9999999999998887655 7999888776643 45778899999999999874
No 425
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=90.22 E-value=10 Score=34.96 Aligned_cols=136 Identities=11% Similarity=0.016 Sum_probs=84.3
Q ss_pred cHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCc--EEEEeccCCcCCCCHHHHHHHHhcCCC
Q 015899 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAA--CLSILTDEKYFKGSFENLEAVRSAGVK 239 (398)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~--aISVLTd~~~F~Gs~edL~~Ir~a~v~ 239 (398)
.|.+.|..... ....+..|+|.. | +. ...-...++....+.+.. -+-+ ..-+.+.|..+|+...+
T Consensus 99 tL~evl~~~~~--~~~~l~iEiK~~-~--~~--~~~~~~~v~~~l~~~~~~~~~vii------~SF~~~~l~~~~~~~p~ 165 (252)
T 3qvq_A 99 TLLEAIEVISQ--YGMGLNLELKPC-E--GL--EEETIAASVEVLKQHWPQDLPLLF------SSFNYFALVSAKALWPE 165 (252)
T ss_dssp BHHHHHHHHHH--TTCEEEEEECCC-T--TC--HHHHHHHHHHHHHHHSCTTSCEEE------EESCHHHHHHHHHHCTT
T ss_pred CHHHHHHHHhc--cCcEEEEEecCC-C--Cc--cHHHHHHHHHHHHHhCcccCCEEE------EeCCHHHHHHHHHHCCC
Confidence 45555554321 347899999932 1 10 000012334445555531 1111 11378889999875456
Q ss_pred CcE--EeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEE-EcCCHHHHHHHhccCCCcEEeec
Q 015899 240 CPL--LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGIELIGIN 316 (398)
Q Consensus 240 lPV--L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LV-EVht~eEl~rAl~l~Ga~iIGIN 316 (398)
+|+ |..+.--+. ...+...|++++.+....++. ++++.++..|+.+.+ -|.+.+++.+.+++ |++-|-+|
T Consensus 166 ~~~~~l~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~----~~v~~~~~~G~~v~~WTvn~~~~~~~l~~~-GVdgIiTD 238 (252)
T 3qvq_A 166 IARGYNVSAIPSAW--QERLEHLDCAGLHIHQSFFDV----QQVSDIKAAGYKVLAFTINDESLALKLYNQ-GLDAVFSD 238 (252)
T ss_dssp SCEEEECSSCCTTH--HHHHHHHTCSEEEEEGGGCCH----HHHHHHHHTTCEEEEECCCCHHHHHHHHHT-TCCEEEES
T ss_pred CcEEEEEecCchhH--HHHHHHcCCeEEecchhhCCH----HHHHHHHHCCCEEEEEcCCCHHHHHHHHHc-CCCEEEeC
Confidence 665 333321222 334567899999998887774 578888999999854 46889999999998 99988877
Q ss_pred c
Q 015899 317 N 317 (398)
Q Consensus 317 n 317 (398)
.
T Consensus 239 ~ 239 (252)
T 3qvq_A 239 Y 239 (252)
T ss_dssp S
T ss_pred C
Confidence 4
No 426
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=90.20 E-value=1 Score=44.45 Aligned_cols=134 Identities=15% Similarity=0.187 Sum_probs=85.5
Q ss_pred CccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcE--------EEEeccCCcCCCCH-HHH
Q 015899 160 ARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAAC--------LSILTDEKYFKGSF-ENL 230 (398)
Q Consensus 160 ~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~a--------ISVLTd~~~F~Gs~-edL 230 (398)
.+.|.++++. ....|+.-.|..|--. + -...+..-||+.. +-+-..--.|.|+. +-+
T Consensus 157 t~~~v~aa~g------~~~~i~~TRKT~PglR-------~-l~kyAV~~GGg~nHR~gL~d~vlikdnHi~~~G~i~~Av 222 (320)
T 3paj_A 157 TARYVQELKG------TQCRLLDTRKTIPGLR-------S-ALKYAVACGGGYNHRIGVFDAYLIKENHIIACGGIRQAI 222 (320)
T ss_dssp HHHHHHHHTT------SSCEEECCSCCCTTCH-------H-HHHHHHHHTTCBCCCSSSSSCEEECHHHHHHHTSHHHHH
T ss_pred HHHHHHHhCC------CCeEEEeecCCCccch-------H-HHhhhHHhcCccceecccchhhccHHHHHHHhCCHHHHH
Confidence 4667777653 3467888888877421 1 1223344566632 22211111233553 455
Q ss_pred HHHHhcCCCCcE--EeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHHHHh
Q 015899 231 EAVRSAGVKCPL--LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVL 305 (398)
Q Consensus 231 ~~Ir~a~v~lPV--L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~rAl 305 (398)
+.+|+.....|| ++.. ..|+.+|..+|||.|.|+. .+.+++++.++.. +=.+.+|++ |++.+....
T Consensus 223 ~~ar~~~p~~kIeVEVdt----ldea~eAl~aGaD~I~LDn--~~~~~l~~av~~l---~~~v~ieaSGGIt~~~I~~~a 293 (320)
T 3paj_A 223 STAKQLNPGKPVEVETET----LAELEEAISAGADIIMLDN--FSLEMMREAVKIN---AGRAALENSGNITLDNLKECA 293 (320)
T ss_dssp HHHHHHSTTSCEEEEESS----HHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHH---TTSSEEEEESSCCHHHHHHHH
T ss_pred HHHHHhCCCCeEEEEECC----HHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHh---CCCCeEEEECCCCHHHHHHHH
Confidence 666664234564 3444 3578899999999999987 6777777777653 336788886 899998888
Q ss_pred ccCCCcEEeecc
Q 015899 306 GIEGIELIGINN 317 (398)
Q Consensus 306 ~l~Ga~iIGINn 317 (398)
+. |+++|++..
T Consensus 294 ~t-GVD~isvGa 304 (320)
T 3paj_A 294 ET-GVDYISVGA 304 (320)
T ss_dssp TT-TCSEEECTH
T ss_pred Hc-CCCEEEECc
Confidence 86 999999974
No 427
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=90.19 E-value=13 Score=35.52 Aligned_cols=165 Identities=14% Similarity=0.104 Sum_probs=99.1
Q ss_pred HHHHHHHHHHcCCcEEEEe-ccCCcCCCCHH-HHHHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEe
Q 015899 199 PVEIARSYEKGGAACLSIL-TDEKYFKGSFE-NLEAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLI 268 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVL-Td~~~F~Gs~e-dL~~I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLi 268 (398)
..++++.+.++|+++|-++ |--+++.=+.+ ..+.+ ++. .-.+||+..=.-.+.. ....|..+|||+|++.
T Consensus 39 l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~ 118 (304)
T 3cpr_A 39 GREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVV 118 (304)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 3456677889999999987 22222222333 33322 322 2369999655444443 2345668899999998
Q ss_pred ccCC---ChHH-HHHHHHHHHHcCCcEEEE-c-------CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhh
Q 015899 269 AAVL---PDLD-IRYMTKICKLLGLTALVE-V-------HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEG 336 (398)
Q Consensus 269 aaiL---~~~~-L~~Li~~a~~LGL~~LVE-V-------ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~ 336 (398)
.-.. +++. .+++-..|...++.+++= + =+.+.+.+..+. ..++||-.. .-|+....+++..
T Consensus 119 ~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiKds-----sgd~~~~~~~~~~ 191 (304)
T 3cpr_A 119 TPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRLSEL--PTILAVXDA-----KGDLVAATSLIKE 191 (304)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTS--TTEEEEEEC-----SCCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcC--CCEEEEecC-----CCCHHHHHHHHHh
Confidence 8754 4444 445556677788887652 1 155666665554 579999732 2466677777653
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
. +..+. +|-. +.+.....+|++|++-|.+=+-++
T Consensus 192 -----~---~f~v~--~G~d--~~~l~~l~~G~~G~is~~an~~P~ 225 (304)
T 3cpr_A 192 -----T---GLAWY--SGDD--PLNLVWLALGGSGFISVIGHAAPT 225 (304)
T ss_dssp -----H---CCEEE--ECSG--GGHHHHHHTTCCEEEESGGGTCHH
T ss_pred -----c---CEEEE--ECcH--HHHHHHHHCCCCEEEecHHHhhHH
Confidence 1 33333 3432 234556678999999998766433
No 428
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=90.19 E-value=14 Score=35.65 Aligned_cols=162 Identities=14% Similarity=0.104 Sum_probs=98.1
Q ss_pred CHHHHHHHHHHcCCcEEEEe-ccCCcCCCCHHHHHHH----Hhc-CCCCcEEeccccCCHH----HHHHHHHcCc-CEEE
Q 015899 198 DPVEIARSYEKGGAACLSIL-TDEKYFKGSFENLEAV----RSA-GVKCPLLCKEFIVDAW----QIYYARTKGA-DAVL 266 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVL-Td~~~F~Gs~edL~~I----r~a-~v~lPVL~KDFIid~~----QI~eAr~~GA-DaVL 266 (398)
...++.+.+.+.|+++|-++ |--+++.=+.+.-..+ .+. .-.+||+..=.-.+.. ....|..+|| |+|+
T Consensus 29 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davl 108 (311)
T 3h5d_A 29 AIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGL 108 (311)
T ss_dssp HHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEE
Confidence 45567788889999999987 2222222234333222 332 2368999754333333 2345667897 9999
Q ss_pred EeccCC---ChHH-HHHHHHHHHHcCCcEEEEc--------CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHh
Q 015899 267 LIAAVL---PDLD-IRYMTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLL 334 (398)
Q Consensus 267 LiaaiL---~~~~-L~~Li~~a~~LGL~~LVEV--------ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~ 334 (398)
++.-.. +++. ++++-..+...++.+++=- =+.+.+.+..+. ..++||-. -. |+....+++
T Consensus 109 v~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgiKd-----ss-d~~~~~~~~ 180 (311)
T 3h5d_A 109 AIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLADH--PNIIGVKE-----CT-SLANMAYLI 180 (311)
T ss_dssp EECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTS--TTEEEEEE-----CS-CHHHHHHHH
T ss_pred EcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcC--CCEEEEEe-----CC-CHHHHHHHH
Confidence 987653 4444 4444455666788876531 145666666664 57999973 22 777777877
Q ss_pred hhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccc
Q 015899 335 EGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 377 (398)
Q Consensus 335 ~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 377 (398)
... +.+..+. +|-. +.+...+.+|++|++-|.+
T Consensus 181 ~~~------~~~f~v~--~G~d--~~~l~~l~~Ga~G~is~~a 213 (311)
T 3h5d_A 181 EHK------PEEFLIY--TGED--GDAFHAMNLGADGVISVAS 213 (311)
T ss_dssp HHC------CSSCEEE--ECCG--GGHHHHHHHTCCEEEESTH
T ss_pred HHc------CCCEEEE--ECcH--HHHHHHHHcCCCEEEechh
Confidence 652 3344443 3332 2244566789999998876
No 429
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=90.17 E-value=0.5 Score=49.85 Aligned_cols=162 Identities=18% Similarity=0.151 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHcCCcEEEEec---cCC------cCC-C-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEE
Q 015899 198 DPVEIARSYEKGGAACLSILT---DEK------YFK-G-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAV 265 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLT---d~~------~F~-G-s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaV 265 (398)
+..++|+.+++.|++.|+|-. ++. +.. + ..+.++.+|+. +++||+.-..|.++.+..++...| ||.|
T Consensus 229 ~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V 307 (671)
T 1ps9_A 229 ETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGH-VSLPLVTTNRINDPQVADDILSRGDADMV 307 (671)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTS-CSSCEEECSSCCSHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHh-cCceEEEeCCCCCHHHHHHHHHcCCCCEE
Confidence 567889999999999999852 211 111 1 25778888986 899999988888999999999998 9999
Q ss_pred EEeccCCChHHHHHHHHHHHHcCCcEE--EEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccc
Q 015899 266 LLIAAVLPDLDIRYMTKICKLLGLTAL--VEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIR 343 (398)
Q Consensus 266 LLiaaiL~~~~L~~Li~~a~~LGL~~L--VEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~ 343 (398)
.+.-.++.+.++-.-++. .+.-+.- +-|.. .-......- ..-...+|.+... +..+. ..+ ..
T Consensus 308 ~~gR~~l~~P~l~~k~~~--g~~~~~~~c~~c~~-~C~~~~~~~-~~~~C~~np~~~~--e~~~~----~~~---~~--- 371 (671)
T 1ps9_A 308 SMARPFLADAELLSKAQS--GRADEINTCIGCNQ-ACLDQIFVG-KVTSCLVNPRACH--ETKMP----ILP---AV--- 371 (671)
T ss_dssp EESTHHHHCTTHHHHHHT--TCGGGCCCCCCCCT-TTHHHHHTT-CCCCCSSCTTTTC--TTTSC----CCS---CS---
T ss_pred EeCHHHHhCcHHHHHHHc--CCCCCccccccccc-ccchhccCC-CceEEEeCccccc--ccccC----CCC---CC---
Confidence 998888866554332221 1111111 11211 011122221 1111123322111 11110 001 00
Q ss_pred cCCceEEEecCCCCHHHHHHHHHcCCCEEEEcc
Q 015899 344 QKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGE 376 (398)
Q Consensus 344 ~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGe 376 (398)
...-++|..+|.....-+..+.+.|.+-+|+..
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~ 404 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDA 404 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 012367788999898989999999998888865
No 430
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=90.17 E-value=0.93 Score=44.64 Aligned_cols=120 Identities=12% Similarity=0.071 Sum_probs=86.1
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. .....+..+. . |-+. ..+..++++.+++.|...| |+.+-..+++.+..+|+. +.+||
T Consensus 173 ~v~avR~~~--g~~~~l~vDa-----N-~~~~-~~~A~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPI 238 (368)
T 3q45_A 173 RIRMIREAA--GDSITLRIDA-----N-QGWS-VETAIETLTLLEPYNIQHC----EEPVSRNLYTALPKIRQA-CRIPI 238 (368)
T ss_dssp HHHHHHHHH--CSSSEEEEEC-----T-TCBC-HHHHHHHHHHHGGGCCSCE----ECCBCGGGGGGHHHHHHT-CSSCE
T ss_pred HHHHHHHHh--CCCCeEEEEC-----C-CCCC-hHHHHHHHHHHhhcCCCEE----ECCCChhHHHHHHHHHhh-CCCCE
Confidence 345555543 1235677763 1 2122 1234567888888886655 445555678889999986 89999
Q ss_pred EeccccCCHHHHHHHHHc-CcCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEcC
Q 015899 243 LCKEFIVDAWQIYYARTK-GADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVH 296 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~-GADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEVh 296 (398)
...+-+.+++++.+.... ++|.|.+....... .+..++...|+..|+.+++-+.
T Consensus 239 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 294 (368)
T 3q45_A 239 MADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGGF 294 (368)
T ss_dssp EESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCS
T ss_pred EEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecCc
Confidence 999999999999988775 58999998888754 5678899999999999998554
No 431
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=90.14 E-value=7 Score=36.76 Aligned_cols=135 Identities=11% Similarity=-0.052 Sum_probs=76.6
Q ss_pred HHHHHHHcCcCEEEEeccC--CCh-------HHHHHHHHHHHHcCCcEEEEcCCH-------------------------
Q 015899 253 QIYYARTKGADAVLLIAAV--LPD-------LDIRYMTKICKLLGLTALVEVHDE------------------------- 298 (398)
Q Consensus 253 QI~eAr~~GADaVLLiaai--L~~-------~~L~~Li~~a~~LGL~~LVEVht~------------------------- 298 (398)
.|..|...||..|.+...- .+. +.|.++.++|+..|+.+.+|-|+.
T Consensus 119 ~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (305)
T 3obe_A 119 ATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSNEFKRVLKAGEKPEQNPNPWAPPKGT 198 (305)
T ss_dssp HHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEECCSGGGSEECCTTCCCC--------CCSE
T ss_pred HHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEecCcccccccccccccccccccccccCCCh
Confidence 3667888999999864211 111 336677778888999999998753
Q ss_pred HHHHHHhccCCCcEEeecc--ccCcccccChhhHHHH-hhhhcccccccCCceEEE-ecCCCCHHHHHHHHHcCCCEEEE
Q 015899 299 REMDRVLGIEGIELIGINN--RNLETFEVDNSNTKKL-LEGERGEIIRQKNIIVVG-ESGLFTPDDIAYVQEAGVKAVLV 374 (398)
Q Consensus 299 eEl~rAl~l~Ga~iIGINn--RdL~tf~vDl~~t~~L-~~~i~~~~i~~~~v~vVA-ESGI~t~eD~~~l~~~GadaVLV 374 (398)
+++++.++.-+.+-+|++- ..+.....|+....+. .+.+.-=.+ .+...+. +|-|.=+.-++.+.+.|+++.+
T Consensus 199 ~~~~~l~~~~~~~~vg~~lD~~H~~~~g~d~~~~i~~~~~ri~~vHl--kD~~~~G~~G~id~~~i~~~L~~~gy~G~i- 275 (305)
T 3obe_A 199 YIEELFLKNTDPDKVMFELDVYWAVMGQQDPVEWMENYPNRFKLLHI--KDRWIIGDSGMMNFPNIFKKAYEIGILGYY- 275 (305)
T ss_dssp EHHHHHHHHSCTTTEEEEEEHHHHHHTTCCHHHHHHHSTTTEEEEEE--CCSSSTTCSSSBCHHHHHHHHHHHTCCEEE-
T ss_pred HHHHHHHHhCCcccEEEEEeHHHHHHcCCCHHHHHHHhhCceeEEEe--ccCcCCCCCCccCHHHHHHHHHHcCCCEEE-
Confidence 3455554422556677751 1111112354333322 121111111 2333345 6667667777888999999987
Q ss_pred cccccC--CCChHHHHHh
Q 015899 375 GESIVK--QDDPGKGITG 390 (398)
Q Consensus 375 GeaLmk--~~dp~~~i~~ 390 (398)
=|.-.. ..+|...+++
T Consensus 276 iE~~~~~~~~~~~~~~~~ 293 (305)
T 3obe_A 276 VELEGDKKGRTQFEGVEK 293 (305)
T ss_dssp ECCCCCSSSCCHHHHHHH
T ss_pred EEecCCcCCCCHHHHHHH
Confidence 554333 3457666654
No 432
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=90.09 E-value=15 Score=36.10 Aligned_cols=164 Identities=13% Similarity=0.114 Sum_probs=95.4
Q ss_pred HHHHHHHHHHcCCcEEEEe-ccCCcCCCCH-HHHHHHHhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEeccC
Q 015899 199 PVEIARSYEKGGAACLSIL-TDEKYFKGSF-ENLEAVRSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIAAV 271 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVL-Td~~~F~Gs~-edL~~Ir~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLiaai 271 (398)
..++++.+.+.|+++|-|+ |--+|+.=+. |..+.++.. .-.+||+..=.-.+.. ....|..+|||+|+++.-.
T Consensus 49 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (344)
T 2hmc_A 49 LVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRV 128 (344)
T ss_dssp HHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 3455677889999999886 2222222233 333333321 1378999654434433 2335567899999998775
Q ss_pred C----ChHH-HHHHHHHHH-HcCCcEEE-Ec------CCHHHHHHH-hccCCCcEEeeccccCccccc--ChhhHHHHhh
Q 015899 272 L----PDLD-IRYMTKICK-LLGLTALV-EV------HDEREMDRV-LGIEGIELIGINNRNLETFEV--DNSNTKKLLE 335 (398)
Q Consensus 272 L----~~~~-L~~Li~~a~-~LGL~~LV-EV------ht~eEl~rA-l~l~Ga~iIGINnRdL~tf~v--Dl~~t~~L~~ 335 (398)
. +++. ++++-..|. ..++.+++ .+ =+.+.+.+. .+. ..++||-.. .- |+....+++.
T Consensus 129 y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l~~e~~~~L~a~~--pnIvGiKds-----sgp~d~~~~~~~~~ 201 (344)
T 2hmc_A 129 LSRGSVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFALRAEH--KNLVGFKEF-----GGPADMRYAAENIT 201 (344)
T ss_dssp SSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHHHHHC--TTEEEEEEC-----SCHHHHHHHHHHTS
T ss_pred cCCCCCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCcCHHHHHHHHhcC--CCEEEEEcC-----CCCCCHHHHHHHHH
Confidence 3 4444 444445666 57887765 32 156666665 454 579999731 23 5666667665
Q ss_pred hhcccccccCCceEEEecCCCCHHHHHHHH-HcCCCEEEEccccc
Q 015899 336 GERGEIIRQKNIIVVGESGLFTPDDIAYVQ-EAGVKAVLVGESIV 379 (398)
Q Consensus 336 ~i~~~~i~~~~v~vVAESGI~t~eD~~~l~-~~GadaVLVGeaLm 379 (398)
.. +.+..+.+ |-. +.+.... .+|++|++-|.+=+
T Consensus 202 ~~------~~~f~v~~--G~D--~~~l~~l~~~Ga~G~is~~anv 236 (344)
T 2hmc_A 202 SR------DDEVTLMI--GVD--TAVVHGFVNCGATGAITGIGNV 236 (344)
T ss_dssp CS------SSSCEEEE--CSG--GGHHHHHHHSCCCEEEESGGGT
T ss_pred Hc------CCCEEEEE--CcH--HHHHHHHHHcCCCEEEeCHHHh
Confidence 31 23444432 322 2234445 78999999998744
No 433
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=90.07 E-value=0.64 Score=46.85 Aligned_cols=92 Identities=10% Similarity=0.033 Sum_probs=74.0
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCC-CcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-h
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-D 274 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~-lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~ 274 (398)
+..++++.+++.|...| |+.+-..+++.++.+++. ++ +||...+-+.++.++.++...| +|.|.+...... -
T Consensus 244 eai~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 318 (428)
T 3bjs_A 244 DARRVLPVLAEIQAGWL----EEPFACNDFASYREVAKI-TPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGI 318 (428)
T ss_dssp HHHHHHHHHHHTTCSCE----ECCSCTTCHHHHHHHTTT-CSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCH
T ss_pred HHHHHHHHHHhcCCCEE----ECCCCccCHHHHHHHHHh-CCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCH
Confidence 45567888888887754 445556789999999986 88 9999999999999999988776 788888777664 3
Q ss_pred HHHHHHHHHHHHcCCcEEEE
Q 015899 275 LDIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 275 ~~L~~Li~~a~~LGL~~LVE 294 (398)
.+..++.+.|+..|+.+++-
T Consensus 319 tea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 319 TEGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp HHHHHHHHHHHHTTCCBCCB
T ss_pred HHHHHHHHHHHHcCCeEEec
Confidence 55788999999999998766
No 434
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=90.06 E-value=1 Score=44.91 Aligned_cols=119 Identities=13% Similarity=-0.039 Sum_probs=84.6
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCC-HHHHHHHHhcCCCCc
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGS-FENLEAVRSAGVKCP 241 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs-~edL~~Ir~a~v~lP 241 (398)
...++++.. .....|..+.- |-+. ..+..++++.+++.|...| |+.+-.++ ++.+..+|+. +++|
T Consensus 188 ~v~avR~a~--g~~~~l~vDaN------~~~~-~~~A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~~l~~~-~~iP 253 (392)
T 3ddm_A 188 NALHVRELL--GAATPLMADAN------QGWD-LPRARQMAQRLGPAQLDWL----EEPLRADRPAAEWAELAQA-APMP 253 (392)
T ss_dssp HHHHHHHHH--CSSSCEEEECT------TCCC-HHHHHHHHHHHGGGCCSEE----ECCSCTTSCHHHHHHHHHH-CSSC
T ss_pred HHHHHHHhc--CCCceEEEeCC------CCCC-HHHHHHHHHHHHHhCCCEE----ECCCCccchHHHHHHHHHh-cCCC
Confidence 345555542 12356777641 1121 1234567888888887665 44556678 9999999987 8999
Q ss_pred EEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEcCC
Q 015899 242 LLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHD 297 (398)
Q Consensus 242 VL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEVht 297 (398)
|...+-+.+++++..+...| +|.|.+...-... .+...+...|+..|+.++ .|.
T Consensus 254 Ia~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~--~h~ 309 (392)
T 3ddm_A 254 LAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVARAVVAAGLRYC--PHY 309 (392)
T ss_dssp EEECTTCCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHHHHHHHTTCEEC--CEE
T ss_pred EEeCCCCCCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEE--ecC
Confidence 99999999999999887665 7888887777754 457888999999999985 454
No 435
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=89.99 E-value=0.95 Score=45.49 Aligned_cols=91 Identities=15% Similarity=0.186 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-H
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-L 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~ 275 (398)
+..++++.+++.|...| |+.+-.++++.+..+|+. +++||...+-+.++++..++...| +|.|.+....... .
T Consensus 216 ~A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit 290 (412)
T 4e4u_A 216 SAIRLAKRLEKYDPLWF----EEPVPPGQEEAIAQVAKH-TSIPIATGERLTTKYEFHKLLQAGGASILQLNVARVGGLL 290 (412)
T ss_dssp HHHHHHHHHGGGCCSEE----ECCSCSSCHHHHHHHHHT-CSSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTSHH
T ss_pred HHHHHHHHhhhcCCcEE----ECCCChhhHHHHHHHHhh-CCCCEEecCccCCHHHHHHHHHcCCCCEEEeCccccCCHH
Confidence 44567888888886655 344556799999999997 899999999999999998888776 8999988887753 5
Q ss_pred HHHHHHHHHHHcCCcEEE
Q 015899 276 DIRYMTKICKLLGLTALV 293 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LV 293 (398)
+...+...|+..|+.++.
T Consensus 291 ~~~kia~~A~~~gi~v~~ 308 (412)
T 4e4u_A 291 EAKKIATLAEVHYAQIAP 308 (412)
T ss_dssp HHHHHHHHHHHTTCEECC
T ss_pred HHHHHHHHHHHcCCEEEe
Confidence 578888999999999654
No 436
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=89.98 E-value=0.56 Score=46.67 Aligned_cols=97 Identities=13% Similarity=0.060 Sum_probs=75.4
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DL 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~ 275 (398)
+..++++.+++.|...| |+.+-..+++.+..+++. +++||...+-+.++.++.++...| +|.|.+...... -.
T Consensus 235 ~ai~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 309 (398)
T 2pp0_A 235 TAIRMGRKMEQFNLIWI----EEPLDAYDIEGHAQLAAA-LDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGIS 309 (398)
T ss_dssp HHHHHHHHHGGGTCSCE----ECCSCTTCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHH
T ss_pred HHHHHHHHHHHcCCcee----eCCCChhhHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHH
Confidence 44567777888887654 445556789999999987 899999999999999999998776 788888766553 34
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCHHHH
Q 015899 276 DIRYMTKICKLLGLTALVEVHDEREM 301 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEVht~eEl 301 (398)
+..++.+.|+..|+.++ +|...+.
T Consensus 310 e~~~i~~~A~~~gi~~~--~h~~~~~ 333 (398)
T 2pp0_A 310 PFLKIMDLAAKHGRKLA--PHFAMEV 333 (398)
T ss_dssp HHHHHHHHHHHTTCEEC--CCSCHHH
T ss_pred HHHHHHHHHHHcCCeEe--ecCccHH
Confidence 57889999999999987 5654443
No 437
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=89.93 E-value=0.81 Score=45.47 Aligned_cols=124 Identities=14% Similarity=0.024 Sum_probs=88.2
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. .....|..+.- |-+. ..+..++++.+++.|...| |+..-..+++.+..+|+. +++||
T Consensus 202 ~v~avR~a~--G~~~~l~vDaN------~~~~-~~~A~~~~~~l~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPI 267 (383)
T 3toy_A 202 MIKGLRALL--GPDIALMLDFN------QSLD-PAEATRRIARLADYDLTWI----EEPVPQENLSGHAAVRER-SEIPI 267 (383)
T ss_dssp HHHHHHHHH--CTTSEEEEECT------TCSC-HHHHHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-CSSCE
T ss_pred HHHHHHHHh--CCCCeEEEeCC------CCCC-HHHHHHHHHHHHhhCCCEE----ECCCCcchHHHHHHHHhh-cCCCE
Confidence 345555542 12456777652 1121 1234567888888886655 455666789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEcCCHHHHH
Q 015899 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHDEREMD 302 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEVht~eEl~ 302 (398)
...+-+.+.+++..+...| +|.|.+....... .+...+...|+..|+.++ +|..-+.-
T Consensus 268 a~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~--~h~~~~a~ 327 (383)
T 3toy_A 268 QAGENWWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLNVAGQADAASIPMS--SHILPEAS 327 (383)
T ss_dssp EECTTCCHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCCBC--CCSCHHHH
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEe--ecCHHHHH
Confidence 9999989999998887765 8998888887764 457788899999999976 46554443
No 438
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=89.87 E-value=0.41 Score=43.89 Aligned_cols=72 Identities=17% Similarity=0.164 Sum_probs=53.1
Q ss_pred HHHHHHHHc--CCcEEEEeccCCcCCC------CHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEeccC
Q 015899 201 EIARSYEKG--GAACLSILTDEKYFKG------SFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (398)
Q Consensus 201 ~iA~aY~~~--GA~aISVLTd~~~F~G------s~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (398)
+..+.|... |++.|-+.|=..-|+| .++.++.+|+. + ++||.. |+.|++..+.++..+|||.+..+.++
T Consensus 127 e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~-~~~~pi~v-~GGI~~~ni~~~~~aGaD~vvvGsai 204 (228)
T 1h1y_A 127 EEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKK-YPSLDIEV-DGGLGPSTIDVAASAGANCIVAGSSI 204 (228)
T ss_dssp GGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHH-CTTSEEEE-ESSCSTTTHHHHHHHTCCEEEESHHH
T ss_pred HHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHh-cCCCCEEE-ECCcCHHHHHHHHHcCCCEEEECHHH
Confidence 445667775 8998888764333333 36778888886 6 788764 45566788989999999999999998
Q ss_pred CCh
Q 015899 272 LPD 274 (398)
Q Consensus 272 L~~ 274 (398)
...
T Consensus 205 ~~~ 207 (228)
T 1h1y_A 205 FGA 207 (228)
T ss_dssp HTS
T ss_pred HCC
Confidence 853
No 439
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=89.78 E-value=0.22 Score=49.79 Aligned_cols=152 Identities=13% Similarity=0.094 Sum_probs=80.4
Q ss_pred HHHHHhcCCCCcEE----eccccCCHHHHHHHH--HcCcCEEEEeccCCChHHHHHHHHHHHHc---CCcEEEEcCCHH-
Q 015899 230 LEAVRSAGVKCPLL----CKEFIVDAWQIYYAR--TKGADAVLLIAAVLPDLDIRYMTKICKLL---GLTALVEVHDER- 299 (398)
Q Consensus 230 L~~Ir~a~v~lPVL----~KDFIid~~QI~eAr--~~GADaVLLiaaiL~~~~L~~Li~~a~~L---GL~~LVEVht~e- 299 (398)
++.+|+. +.||+ +-|..-+-.+...+. .+|||+|-+.+ ....+.++.+++.+..- |+.+|+..+|.+
T Consensus 154 v~~lr~~--g~~VflDlK~~DIgnTva~ya~a~~~~lgaD~vTVhp-~~G~dsl~~a~~~~~~k~~~gV~VL~lTSN~~~ 230 (353)
T 2ffc_A 154 FDYLHHL--NVPTILDIKMNDIGNTVKHYRKFIFDYLRSDSCTANI-YMGTQMLRDICLDEECKRYYSTFVLVKTTNADS 230 (353)
T ss_dssp HHHHHHH--TCCEEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECC-TTCSTTHHHHHBCTTSCCBCEEEEEEECSSTTT
T ss_pred HHHHHHc--CCcEEEEEecCchHHHHHHHHHHHHHHcCCCEEEEeC-CCCHHHHHHHHHHhcCCCcceEEEehhcCCCCH
Confidence 5666764 77887 456444444444444 48999999854 45555577776323222 677777988644
Q ss_pred -HHHH------------H----hccCCCcEEeeccccCccccc---ChhhHHHHhhhhcccccccCCceEEEecCCCC-H
Q 015899 300 -EMDR------------V----LGIEGIELIGINNRNLETFEV---DNSNTKKLLEGERGEIIRQKNIIVVGESGLFT-P 358 (398)
Q Consensus 300 -El~r------------A----l~l~Ga~iIGINnRdL~tf~v---Dl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t-~ 358 (398)
+++. + .++ |.+++|......-.+.+ ..+....+... .+ +.+++ --||.- -
T Consensus 231 ~dlq~~~~~~g~~v~e~V~~~A~~~-g~~~~~~~~~G~~g~VVGats~~el~~IR~~------~~-~~~iL-tPGIgaqG 301 (353)
T 2ffc_A 231 HIFQNRLSLDGKEAYVVIAEEVQKM-AKQLHLEENGEFVGFVVGANCYDEIKKIREL------FP-DCYIL-APGVGAQK 301 (353)
T ss_dssp HHHHTTCEETTEEHHHHHHHHHHHH-HHHTTTGGGTCCEEEEECTTCHHHHHHHHHH------CT-TCCEE-ECCBSTTC
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHh-CccccccCCCCCCCEEEeCCCHHHHHHHHHh------CC-CCeEE-eCcccCCC
Confidence 3221 1 111 21111111000001111 12222233222 12 22222 234421 0
Q ss_pred HHHHHHHHcCCC------EEEEcccccCCCChHHHHHhhhc
Q 015899 359 DDIAYVQEAGVK------AVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 359 eD~~~l~~~Gad------aVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
.|.+.+..+|+| -++||.+|+++.||.++.+++..
T Consensus 302 GD~~~a~~~Gad~~~~~~iIvVGR~I~~A~dp~~AA~~i~~ 342 (353)
T 2ffc_A 302 GDLRKMLCNGYSKNYEKVLINVGRAITKSGSPQQAAREYHQ 342 (353)
T ss_dssp BCHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHH
T ss_pred CCHHHHHHcCCCcccCcEEEEECHHHcCCCCHHHHHHHHHH
Confidence 245556677888 79999999999999999888753
No 440
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=89.72 E-value=0.6 Score=46.11 Aligned_cols=92 Identities=15% Similarity=0.144 Sum_probs=73.9
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHc-CcCEEEEeccCCCh-H
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK-GADAVLLIAAVLPD-L 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~-GADaVLLiaaiL~~-~ 275 (398)
+..++++.+++.|...| |+....++++.+..+|+. +++||...+-+.++++..++... ++|.|.+....... .
T Consensus 209 ~A~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit 283 (374)
T 3sjn_A 209 HSAMMAKRLEEFNLNWI----EEPVLADSLISYEKLSRQ-VSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGIT 283 (374)
T ss_dssp HHHHHHHHSGGGCCSEE----ECSSCTTCHHHHHHHHHH-CSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHH
T ss_pred HHHHHHHHhhhcCceEE----ECCCCcccHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHH
Confidence 34567788888886655 445556799999999987 89999999999999998888765 68999998888764 4
Q ss_pred HHHHHHHHHHHcCCcEEEE
Q 015899 276 DIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVE 294 (398)
+...+...|+..|+.+++-
T Consensus 284 ~~~~ia~~A~~~gi~~~~h 302 (374)
T 3sjn_A 284 EMKKIYDIAQMNGTQLIPH 302 (374)
T ss_dssp HHHHHHHHHHHHTCEECCB
T ss_pred HHHHHHHHHHHcCCEEEec
Confidence 5788889999999998753
No 441
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=89.71 E-value=6.7 Score=36.63 Aligned_cols=169 Identities=12% Similarity=0.099 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhc--CCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChH
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a--~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~ 275 (398)
+|. .+......||++|-+=.| +. -.+.+.......+ ....|++.+=.-.++..|..+..+|+|+|++ -.+-+.+
T Consensus 29 ~p~-~~e~a~~~gaD~v~lDlE-d~-p~~~~~a~~~~~~~~~~~~~~~VRv~~~~~~~i~~~l~~g~~gI~~-P~V~s~~ 104 (256)
T 1dxe_A 29 NPI-STEVLGLAGFDWLVLDGE-HA-PNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLI-PFVETKE 104 (256)
T ss_dssp SHH-HHHHHTTSCCSEEEEESS-SS-SCCHHHHHHHHHHTTTCSSEEEEECSSSCHHHHHHHHHTTCCEEEE-SCCCSHH
T ss_pred CHH-HHHHHHhCCCCEEEEcCC-CC-CCCHHHHHHHHHHHHhCCCcEEEECCCCCHHHHHHHHhcCCceeee-cCcCCHH
Confidence 444 444556779997766333 32 5566666554332 1245554332235777799999999999766 6667778
Q ss_pred HHHHHHHHHHH------------------------------cCCcEEEEcCC-HHHHHHHhccCCCcEEeeccccCccc-
Q 015899 276 DIRYMTKICKL------------------------------LGLTALVEVHD-EREMDRVLGIEGIELIGINNRNLETF- 323 (398)
Q Consensus 276 ~L~~Li~~a~~------------------------------LGL~~LVEVht-~eEl~rAl~l~Ga~iIGINnRdL~tf- 323 (398)
+++.+.+.++. ..+-+++|+.. .+.++..+..++.+.+-|..-||...
T Consensus 105 ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~~l 184 (256)
T 1dxe_A 105 EAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDLAAAL 184 (256)
T ss_dssp HHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHTHHHHHTSTTCCEEEECHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHhHHHHhCCCCCCEEEEChHHHHHHh
Confidence 88888776641 12344666531 12222323334667665554444221
Q ss_pred ----ccC---hhhH-HHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEccc
Q 015899 324 ----EVD---NSNT-KKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 377 (398)
Q Consensus 324 ----~vD---l~~t-~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 377 (398)
..+ +... .+++...+. .++.+..-. .+++++..+.+.|++.+.+|.-
T Consensus 185 g~~~~~~~p~v~~a~~~iv~aa~a-----~G~~~~v~~--~d~~~~~~~~~~G~~~~s~~~d 239 (256)
T 1dxe_A 185 GHLGNASHPDVQKAIQHIFNRASA-----HGKPSGILA--PVEADARRYLEWGATFVAVGSD 239 (256)
T ss_dssp TCTTCTTSHHHHHHHHHHHHHHHH-----TTCCEEEEC--CSHHHHHHHHHTTCCEEEEEEH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHH-----hCCceEEec--CCHHHHHHHHHcCCCEEEechH
Confidence 111 1111 223332222 233222222 3899999999999999999963
No 442
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=89.68 E-value=1.7 Score=43.46 Aligned_cols=118 Identities=10% Similarity=0.054 Sum_probs=85.0
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCC-cCCCCHHHHHHHHhcCCCCc
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEK-YFKGSFENLEAVRSAGVKCP 241 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~-~F~Gs~edL~~Ir~a~v~lP 241 (398)
...++++.. .....|....- .| +. ..+...+++.+++.|...| |+. .-.++++.+..+|+. +++|
T Consensus 202 ~v~avR~a~--g~d~~l~vDaN-----~~-~~-~~~A~~~~~~L~~~~i~~i----EqP~~~~~~~~~~~~l~~~-~~iP 267 (410)
T 3dip_A 202 PFRKIRAAV--GQRIEIMCELH-----SL-WG-THAAARICNALADYGVLWV----EDPIAKMDNIPAVADLRRQ-TRAP 267 (410)
T ss_dssp HHHHHHHHH--TTSSEEEEECT-----TC-BC-HHHHHHHHHHGGGGTCSEE----ECCBSCTTCHHHHHHHHHH-HCCC
T ss_pred HHHHHHHHc--CCCceEEEECC-----CC-CC-HHHHHHHHHHHHhcCCCEE----ECCCCCcccHHHHHHHHhh-CCCC
Confidence 345566543 12456777642 12 21 1234556777888776655 344 345789999999987 8999
Q ss_pred EEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEE
Q 015899 242 LLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 242 VL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVE 294 (398)
|...+-+.++++..++...| +|.|.+....... .+...+...|+..|+.++.-
T Consensus 268 Ia~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h 322 (410)
T 3dip_A 268 ICGGENLAGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAPH 322 (410)
T ss_dssp EEECTTCCSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEEC
T ss_pred EEecCCcCCHHHHHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHcCCEEeee
Confidence 99999999999999988776 7999998887754 56788899999999998763
No 443
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=89.67 E-value=0.69 Score=43.81 Aligned_cols=113 Identities=12% Similarity=0.106 Sum_probs=77.2
Q ss_pred HHHHHHHcCCcEEEEeccCCcC-CCCH----HHHHHHHhcCCC---CcEE-eccccCCHHHHHHH----HHcCcCEEEEe
Q 015899 202 IARSYEKGGAACLSILTDEKYF-KGSF----ENLEAVRSAGVK---CPLL-CKEFIVDAWQIYYA----RTKGADAVLLI 268 (398)
Q Consensus 202 iA~aY~~~GA~aISVLTd~~~F-~Gs~----edL~~Ir~a~v~---lPVL-~KDFIid~~QI~eA----r~~GADaVLLi 268 (398)
-++...+.||+.|.+.-.-.++ .|.+ ++|..|+++ ++ ++|+ --.+ +++.++..| ..+|||.|=--
T Consensus 100 Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a-~~~~~lKVIlEt~~-Lt~eei~~a~~ia~~aGADfVKTS 177 (239)
T 3ngj_A 100 ETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDA-SGKALTKVIIECCY-LTNEEKVEVCKRCVAAGAEYVKTS 177 (239)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHH-HTTSEEEEECCGGG-SCHHHHHHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHH-hcCCceEEEEecCC-CCHHHHHHHHHHHHHHCcCEEECC
Confidence 3555677799999998766543 3554 466777765 43 4544 2345 577788877 78999999876
Q ss_pred ccCC----ChHHHHHHHHHHH-HcCCcEEEEcCCHHHHHHHhccCCCcEEeecc
Q 015899 269 AAVL----PDLDIRYMTKICK-LLGLTALVEVHDEREMDRVLGIEGIELIGINN 317 (398)
Q Consensus 269 aaiL----~~~~L~~Li~~a~-~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINn 317 (398)
+-.- +.++.+.|.+... .+|+-+==-++|.+++...+++ ||+-||+..
T Consensus 178 TGf~~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~a-GA~riGtS~ 230 (239)
T 3ngj_A 178 TGFGTHGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINN-GASRIGASA 230 (239)
T ss_dssp CSSSSCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHT-TEEEEEESC
T ss_pred CCCCCCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHh-cccceeccc
Confidence 4332 3355666655543 2444444457999999999998 999999863
No 444
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=89.65 E-value=2.7 Score=41.39 Aligned_cols=159 Identities=16% Similarity=0.168 Sum_probs=96.0
Q ss_pred CCceEEEEeccCCCC------CCCCCCCCCHHHHHHHHH-HcCCcEEEEe---ccCCcCCCCHHHHH----HHHhcCCCC
Q 015899 175 GLPALIAEVKKASPS------RGILREDFDPVEIARSYE-KGGAACLSIL---TDEKYFKGSFENLE----AVRSAGVKC 240 (398)
Q Consensus 175 ~~~~vIAEvKraSPS------kG~i~~~~dp~~iA~aY~-~~GA~aISVL---Td~~~F~Gs~edL~----~Ir~a~v~l 240 (398)
+++.++.||--.+|- .=+-....++.+.|+.+. +.||+.|-|- |+|++-.=+.+.+. .+++. +++
T Consensus 52 n~p~iam~V~D~~pe~~~~v~~~~~~~~~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~-~~v 130 (323)
T 4djd_D 52 NRPVIGMEVQDIVPDWPDVLKDPFTDVINEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQA-VGV 130 (323)
T ss_dssp SCCEEEEEEESSCCSCCHHHHGGGTTTTTCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHH-CCS
T ss_pred CCCeEEEEEecCCccchhhHHHHHHHHHHhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhh-CCc
Confidence 567899999999887 221123457999999998 9999999996 66654444554433 44555 799
Q ss_pred cEEec---cccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC-CHHHHH----HHhccCCC--
Q 015899 241 PLLCK---EFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH-DEREMD----RVLGIEGI-- 310 (398)
Q Consensus 241 PVL~K---DFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh-t~eEl~----rAl~l~Ga-- 310 (398)
||--- +--.++.-+.+|..+|++...+|-++-.+ ....+...+...|..+++-.. |.+.++ .+.++ |.
T Consensus 131 PlsIDg~~~~T~~~eV~eaAleagag~~~lINsv~~~-~~~~m~~laa~~g~~vVlmh~~d~~~~~~l~~~a~~~-GI~~ 208 (323)
T 4djd_D 131 PLVVVGCGDVEKDHEVLEAVAEAAAGENLLLGNAEQE-NYKSLTAACMVHKHNIIARSPLDINICKQLNILINEM-NLPL 208 (323)
T ss_dssp CEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEEBTT-BCHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTT-TCCG
T ss_pred eEEEECCCCCCCCHHHHHHHHHhcCCCCCeEEECCcc-cHHHHHHHHHHhCCeEEEEccchHHHHHHHHHHHHHc-CCCH
Confidence 98622 22123445667788899854333333222 356788888899998887532 444333 33343 54
Q ss_pred -cEEeeccccCcccccChhhHHHHhhhhc
Q 015899 311 -ELIGINNRNLETFEVDNSNTKKLLEGER 338 (398)
Q Consensus 311 -~iIGINnRdL~tf~vDl~~t~~L~~~i~ 338 (398)
+|| +.. ..-+|..+++...+++..++
T Consensus 209 e~II-lDP-g~g~fgk~~e~~l~~l~~ir 235 (323)
T 4djd_D 209 DHIV-IDP-SIGGLGYGIEYSFSIMERIR 235 (323)
T ss_dssp GGEE-EEC-CCCCTTTTHHHHHHHHHHHH
T ss_pred HHEE-EeC-CCccccCCHHHHHHHHHHHH
Confidence 232 110 11235566666666555543
No 445
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=89.64 E-value=8.5 Score=35.42 Aligned_cols=135 Identities=13% Similarity=0.049 Sum_probs=85.3
Q ss_pred cHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCc-EEEEeccCCcCCCCHHHHHHHHhcCCCC
Q 015899 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAA-CLSILTDEKYFKGSFENLEAVRSAGVKC 240 (398)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~-aISVLTd~~~F~Gs~edL~~Ir~a~v~l 240 (398)
.|.+.|.... ..+..+..|+|..... ...-...+++...+.|.. -+-+ ..-+.+.|..+|+...++
T Consensus 101 tL~evL~~~~--~~~~~l~iEiK~~~~~-----~~~~~~~v~~~l~~~~~~~~vii------~SF~~~~l~~~~~~~p~~ 167 (252)
T 2pz0_A 101 TLYEVFELIG--DKDFLVNIEIKSGIVL-----YPGIEEKLIKAIKEYNFEERVII------SSFNHYSLRDVKKMAPHL 167 (252)
T ss_dssp BHHHHHHHHT--TSCCEEEEEECCSSCC-----CTTHHHHHHHHHHHTTCTTTEEE------EESBHHHHHHHHHHCTTS
T ss_pred CHHHHHHHhh--hcCCeEEEEeCCCCcc-----cHHHHHHHHHHHHhcCCCCCEEE------EeCCHHHHHHHHHHCCCC
Confidence 3555554432 1257899999954321 111224566666666643 1111 113678888888753466
Q ss_pred cE--EeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEE-EcCCHHHHHHHhccCCCcEEeec
Q 015899 241 PL--LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGIELIGIN 316 (398)
Q Consensus 241 PV--L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LV-EVht~eEl~rAl~l~Ga~iIGIN 316 (398)
|+ |..+...+. ...++..|++++......++ .++++.+++.|+.+++ -|.+.+++.+.+++ |++.|-++
T Consensus 168 ~~~~l~~~~~~~~--~~~~~~~~~~~i~~~~~~~~----~~~v~~~~~~G~~v~~wTvn~~~~~~~l~~~-GvdgIiTD 239 (252)
T 2pz0_A 168 KIGLLYQCGLVEP--WHMALRMEAYSLHPFYFNII----PELVEGCKKNGVKLFPWTVDRKEDMERMIKA-GVDGIITD 239 (252)
T ss_dssp EEEEEECSBCSST--HHHHHHTTCSEEEEBGGGCC----HHHHHHHHHTTCEECCBCCCSHHHHHHHHHH-TCSEEEES
T ss_pred CEEEEecCccccH--HHHHHHcCCeEEecchhcCC----HHHHHHHHHCCCEEEEECCCCHHHHHHHHHc-CCCEEEcC
Confidence 65 333332232 23456789999998877776 4578888999998843 27899999999998 99987766
No 446
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=89.60 E-value=0.9 Score=44.79 Aligned_cols=114 Identities=8% Similarity=0.010 Sum_probs=81.2
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCH---HHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCC
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP---VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK 239 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp---~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~ 239 (398)
...++++.. .....+..+. +..+++ .++++.+++.| +..+ |+.+-..+++.+..+|+. ++
T Consensus 186 ~v~avR~~~--g~~~~l~vDa----------n~~~~~~~a~~~~~~l~~~~---i~~i-EqP~~~~d~~~~~~l~~~-~~ 248 (372)
T 3tj4_A 186 RLTAVRERV--DSAVRIAIDG----------NGKWDLPTCQRFCAAAKDLD---IYWF-EEPLWYDDVTSHARLARN-TS 248 (372)
T ss_dssp HHHHHHHHS--CTTCEEEEEC----------TTCCCHHHHHHHHHHTTTSC---EEEE-ESCSCTTCHHHHHHHHHH-CS
T ss_pred HHHHHHHHc--CCCCcEEeeC----------CCCCCHHHHHHHHHHHhhcC---CCEE-ECCCCchhHHHHHHHHhh-cC
Confidence 345565542 1235677664 223344 34566666655 4444 444556789999999987 89
Q ss_pred CcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEE
Q 015899 240 CPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALV 293 (398)
Q Consensus 240 lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LV 293 (398)
+||...+-+.+++++.++...| +|.|.+...-... .+...+...|+..|+.+++
T Consensus 249 iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~ 304 (372)
T 3tj4_A 249 IPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVP 304 (372)
T ss_dssp SCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCCBCC
T ss_pred CCEEeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe
Confidence 9999999999999999888775 7998888877764 4578888999999999764
No 447
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=89.55 E-value=0.51 Score=47.63 Aligned_cols=119 Identities=10% Similarity=0.101 Sum_probs=86.4
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. .....|....- .| +. ..+..++++.+++.|...| |+..-..+++.+..+|+. +++||
T Consensus 216 ~v~avR~a~--G~d~~l~vDaN-----~~-~~-~~~A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 281 (425)
T 3vcn_A 216 LFERAREVL--GWDVHLLHDVH-----HR-LT-PIEAARLGKDLEPYRLFWL----EDSVPAENQAGFRLIRQH-TTTPL 281 (425)
T ss_dssp HHHHHHHHH--CSSSEEEEECT-----TC-CC-HHHHHHHHHHHGGGCCSEE----ECCSCCSSTTHHHHHHHH-CCSCE
T ss_pred HHHHHHHHc--CCCCEEEEECC-----CC-CC-HHHHHHHHHHHHhcCCCEE----ECCCChhhHHHHHHHHhc-CCCCE
Confidence 356666543 12456776541 12 21 2245567888888887665 344555788899999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEc
Q 015899 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEV 295 (398)
...+-+.++++..++...| +|.|.+....... .+...+...|+..|+.+++-+
T Consensus 282 a~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 336 (425)
T 3vcn_A 282 AVGEIFAHVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAAFADLHHVKTGCHG 336 (425)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHGGGTCEECCCC
T ss_pred EeCCCcCCHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHHHHHHcCCEEeecc
Confidence 9999999999999888776 8999998887765 457788899999999976544
No 448
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=89.50 E-value=1.2 Score=43.13 Aligned_cols=95 Identities=15% Similarity=0.058 Sum_probs=63.5
Q ss_pred ceEEEEeccCCCCCCCCCCCCCHH---HHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccC-CH-
Q 015899 177 PALIAEVKKASPSRGILREDFDPV---EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIV-DA- 251 (398)
Q Consensus 177 ~~vIAEvKraSPSkG~i~~~~dp~---~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIi-d~- 251 (398)
+.+|+|. |- |.-- ..|+. ..|+...+.||+-|-+- |.+ +.++.+++. +.+||++-..+- ++
T Consensus 172 lpvIie~----~~-G~~~-~~d~e~i~~aariA~elGAD~VKt~-----~t~--e~~~~vv~~-~~vPVv~~GG~~~~~~ 237 (295)
T 3glc_A 172 MPTMAVT----GV-GKDM-VRDQRYFSLATRIAAEMGAQIIKTY-----YVE--KGFERIVAG-CPVPIVIAGGKKLPER 237 (295)
T ss_dssp CCEEEEE----CC------CCSHHHHHHHHHHHHHTTCSEEEEE-----CCT--TTHHHHHHT-CSSCEEEECCSCCCHH
T ss_pred CEEEEEC----CC-CCcc-CCCHHHHHHHHHHHHHhCCCEEEeC-----CCH--HHHHHHHHh-CCCcEEEEECCCCCHH
Confidence 6788896 22 3211 23443 35678889999988873 323 457888875 789999888775 43
Q ss_pred ---HHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHH
Q 015899 252 ---WQIYYARTKGADAVLLIAAVLPDLDIRYMTKICK 285 (398)
Q Consensus 252 ---~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~ 285 (398)
.++++|..+||+++..+-.++..++-..+++...
T Consensus 238 ~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~~~al~ 274 (295)
T 3glc_A 238 EALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQ 274 (295)
T ss_dssp HHHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHHHHHHH
Confidence 2677888999999999998884434444444333
No 449
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=89.48 E-value=0.73 Score=45.61 Aligned_cols=91 Identities=14% Similarity=0.169 Sum_probs=71.8
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-H
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-L 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~ 275 (398)
+..++++.+++.|. .| -+| +- +++.+..+|+. +++||...+-+.++.+..++...| +|.|.+....... .
T Consensus 204 ~a~~~~~~l~~~~i-~i---EqP-~~--~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit 275 (378)
T 3eez_A 204 QALRVMRATEDLHV-MF---EQP-GE--TLDDIAAIRPL-HSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLT 275 (378)
T ss_dssp HHHHHHHHTGGGTC-CE---ECC-SS--SHHHHHHTGGG-CCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHH
T ss_pred HHHHHHHHhccCCe-EE---ecC-CC--CHHHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHH
Confidence 34556777777774 33 333 33 89999999987 899999999999999999888775 8999998877743 4
Q ss_pred HHHHHHHHHHHcCCcEEEEcC
Q 015899 276 DIRYMTKICKLLGLTALVEVH 296 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVEVh 296 (398)
+..++...|+..|+.+++-+.
T Consensus 276 ~~~~ia~~A~~~g~~~~~~~~ 296 (378)
T 3eez_A 276 RAARMRDIALTHGIDMFVMAT 296 (378)
T ss_dssp HHHHHHHHHHHTTCEEEEECS
T ss_pred HHHHHHHHHHHcCCEEEcCCC
Confidence 578889999999999998653
No 450
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=89.48 E-value=6.2 Score=35.47 Aligned_cols=191 Identities=10% Similarity=0.077 Sum_probs=100.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCc----CCCCHHHHHHHHhcCCCCcEE--ec--cccC-C-------HHHHHHHHHc
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKY----FKGSFENLEAVRSAGVKCPLL--CK--EFIV-D-------AWQIYYARTK 260 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~----F~Gs~edL~~Ir~a~v~lPVL--~K--DFIi-d-------~~QI~eAr~~ 260 (398)
.++.+..+...+.|.++|-+..+... .....+.++...+. ..+.+. .- +|-. + ...+..|...
T Consensus 19 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 97 (272)
T 2q02_A 19 LSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEK-YGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGV 97 (272)
T ss_dssp SCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHH-TTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHH-cCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHh
Confidence 34555666666666666666543211 12334444443222 233332 11 1110 1 2246678899
Q ss_pred CcCEEEEeccCCC--------hHHHHHHHHHHHHcCCcEEEEcC--------CHHHHHHHhccCCCcEEeeccccCcccc
Q 015899 261 GADAVLLIAAVLP--------DLDIRYMTKICKLLGLTALVEVH--------DEREMDRVLGIEGIELIGINNRNLETFE 324 (398)
Q Consensus 261 GADaVLLiaaiL~--------~~~L~~Li~~a~~LGL~~LVEVh--------t~eEl~rAl~l~Ga~iIGINnRdL~tf~ 324 (398)
||+.|.+....-. -+.|.++.++|++.|+.+.+|-| |.+++.+.++.-+ +-+|++ -|...+.
T Consensus 98 G~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~l~~~v~-~~~g~~-~D~~h~~ 175 (272)
T 2q02_A 98 GARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQQLIREAG-SPFKVL-LDTFHHH 175 (272)
T ss_dssp TCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHHHHHHHHHHHT-CCCEEE-EEHHHHH
T ss_pred CCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccCHHHHHHHHHHhC-cCeEEE-EEchHhh
Confidence 9999987543221 33478888888899999999987 4677766665324 566665 1111111
Q ss_pred c----ChhhHHHH-hhhhccccccc------------CCceEEEecC-CCCHHHHHHHHHcCCCEEEEcccccCC-----
Q 015899 325 V----DNSNTKKL-LEGERGEIIRQ------------KNIIVVGESG-LFTPDDIAYVQEAGVKAVLVGESIVKQ----- 381 (398)
Q Consensus 325 v----Dl~~t~~L-~~~i~~~~i~~------------~~v~vVAESG-I~t~eD~~~l~~~GadaVLVGeaLmk~----- 381 (398)
. ..+....+ .+.+..-.+.. .....+.+|| |.-.+-++.+.+.|+++.++=|.+...
T Consensus 176 ~~~~~~~~~~~~l~~~~i~~vH~~D~~~~~~~~~~~~~~~~~~G~G~~id~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~ 255 (272)
T 2q02_A 176 LYEEAEKEFASRIDISAIGLVHLSGVEDTRPTEALADEQRIMLSEKDVMQNYQQVQRLENMGYRGIYAFEPFSSQLASWS 255 (272)
T ss_dssp HCTTHHHHHHHHCCGGGEEEEEECBCCCCSCGGGCCGGGCBCCCTTCSSCHHHHHHHHHHTTCCSCEEECCCCGGGGGCC
T ss_pred ccCCCchhhhhhCCHhHEEEEEeCCCcCCCCchhccccccccCCCCCcccHHHHHHHHHhcCCCCceEEEecCHHhhcCC
Confidence 1 00111111 11111000100 1113345777 766777788889999998888865431
Q ss_pred -CChHHHHHh
Q 015899 382 -DDPGKGITG 390 (398)
Q Consensus 382 -~dp~~~i~~ 390 (398)
.+|.+.+++
T Consensus 256 ~~~~~~~~~~ 265 (272)
T 2q02_A 256 EAEIEEQINR 265 (272)
T ss_dssp HHHHHHHHHH
T ss_pred hhHHHHHHHH
Confidence 155555544
No 451
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=89.46 E-value=1.2 Score=44.63 Aligned_cols=119 Identities=9% Similarity=0.060 Sum_probs=87.9
Q ss_pred cHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCc
Q 015899 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP 241 (398)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lP 241 (398)
....++++.. .....|..+.- |-+.. .+ .++++.+++.|...| |+.+-.++++.+..+|+. +++|
T Consensus 193 ~~v~avR~a~--G~~~~L~vDaN------~~w~~-~~-~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iP 257 (400)
T 3mwc_A 193 EPLQETRRAV--GDHFPLWTDAN------SSFEL-DQ-WETFKAMDAAKCLFH----EQPLHYEALLDLKELGER-IETP 257 (400)
T ss_dssp HHHHHHHHHH--CTTSCEEEECT------TCCCG-GG-HHHHHHHGGGCCSCE----ESCSCTTCHHHHHHHHHH-SSSC
T ss_pred HHHHHHHHhc--CCCCEEEEeCC------CCCCH-HH-HHHHHHHHhcCCCEE----eCCCChhhHHHHHHHHhh-CCCC
Confidence 3456666543 12356777642 22332 23 688899988886655 455667889999999987 8999
Q ss_pred EEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hHHHHHHHHHHHHcCCcEEEEc
Q 015899 242 LLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 242 VL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~~LVEV 295 (398)
|...+-+.+.+++..+...| +|.|.+...... -.+...+...|+..|+.+++-+
T Consensus 258 Ia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 313 (400)
T 3mwc_A 258 ICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWGGT 313 (400)
T ss_dssp EEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 99999999999999888765 789888877664 3457888999999999987654
No 452
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=89.41 E-value=0.64 Score=46.42 Aligned_cols=118 Identities=12% Similarity=0.095 Sum_probs=84.7
Q ss_pred HHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE
Q 015899 164 IGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL 243 (398)
Q Consensus 164 ~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL 243 (398)
..++++.. .....|....- .| +. ..+..++++.+++.|...| |+.+-..+++.+..+|+. +++||.
T Consensus 191 v~avR~a~--G~d~~l~vDan-----~~-~~-~~~A~~~~~~L~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPIa 256 (401)
T 3sbf_A 191 FKSLREKY--GNQFHILHDVH-----ER-LF-PNQAIQFAKEVEQYKPYFI----EDILPPNQTEWLDNIRSQ-SSVSLG 256 (401)
T ss_dssp HHHHHHHH--TTSSEEEEECT-----TC-SC-HHHHHHHHHHHGGGCCSCE----ECSSCTTCGGGHHHHHTT-CCCCEE
T ss_pred HHHHHHHc--CCCCEEEEECC-----CC-CC-HHHHHHHHHHHHhcCCCEE----ECCCChhHHHHHHHHHhh-CCCCEE
Confidence 45555543 12456776642 12 21 2245567888888886655 344556788999999986 899999
Q ss_pred eccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEc
Q 015899 244 CKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 244 ~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEV 295 (398)
..+-+.++++..++...| +|.|.+....... .+...+...|+..|+.+++-+
T Consensus 257 ~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~ 310 (401)
T 3sbf_A 257 LGELFNNPEEWKSLIANRRIDFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHC 310 (401)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCC
T ss_pred eCCccCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 999999999999988775 8999888877743 457888899999999976433
No 453
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=89.31 E-value=1.4 Score=42.01 Aligned_cols=138 Identities=17% Similarity=0.143 Sum_probs=85.9
Q ss_pred CccHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCc--------EEEEec-cCCcCCCCHHHH
Q 015899 160 ARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAA--------CLSILT-DEKYFKGSFENL 230 (398)
Q Consensus 160 ~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~--------aISVLT-d~~~F~Gs~edL 230 (398)
.+.|..+++. ....|..-.|..|.- -...+++...+|+. ++-+-. .-.+|+|-.+.+
T Consensus 107 t~~~v~a~~~------~~~~~~~tRkt~p~~--------r~~~~~A~~~gG~~~hr~~l~d~vlik~~Hi~~~g~~~~ai 172 (273)
T 2b7n_A 107 TSRFVEALNS------HKVRLLDTRKTRPLL--------RIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFL 172 (273)
T ss_dssp HHHHHHHHCC------SSSEEECCSCCCTTC--------HHHHHHHHHTTTCCCCCSSTTTCEEECHHHHTTCSSHHHHH
T ss_pred HHHHHHHhCC------CCeEEEEcCCCChhh--------HHHHHHHHHhCCCcceEcCccceEEeeCCHHHHhCCHHHHH
Confidence 4566766653 236788888877742 12234555567765 333211 123354446778
Q ss_pred HHHHhcCCC--CcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHHHHh
Q 015899 231 EAVRSAGVK--CPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVL 305 (398)
Q Consensus 231 ~~Ir~a~v~--lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~rAl 305 (398)
+.+|+. .. ++|.. -+-+..|+.+|..+|||.|.|.. .+.++++++++..+...-.+-+++. |++.+....
T Consensus 173 ~~~r~~-~~~~~~i~v--ev~tlee~~~A~~aGaD~I~ld~--~~~~~l~~~v~~l~~~~~~~~i~AsGGI~~~ni~~~~ 247 (273)
T 2b7n_A 173 THARKN-LPFTAKIEI--ECESFEEAKNAMNAGADIVMCDN--LSVLETKEIAAYRDAHYPFVLLEASGNISLESINAYA 247 (273)
T ss_dssp HHHGGG-SCTTCCEEE--EESSHHHHHHHHHHTCSEEEEET--CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHH
T ss_pred HHHHHh-CCCCceEEE--EcCCHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhhccCCCcEEEEECCCCHHHHHHHH
Confidence 888875 32 34432 11134678899999999999986 6777888887766542112344443 777888888
Q ss_pred ccCCCcEEeecc
Q 015899 306 GIEGIELIGINN 317 (398)
Q Consensus 306 ~l~Ga~iIGINn 317 (398)
+. |++.||+..
T Consensus 248 ~a-GaD~i~vGs 258 (273)
T 2b7n_A 248 KS-GVDAISVGA 258 (273)
T ss_dssp TT-TCSEEECTH
T ss_pred Hc-CCcEEEEcH
Confidence 86 999999974
No 454
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=88.95 E-value=1.2 Score=44.04 Aligned_cols=119 Identities=11% Similarity=0.077 Sum_probs=85.2
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++... ....+..+.- |-+. ..+..++++.+++.|...| |+.+-..+++.+..+|+. +++||
T Consensus 183 ~v~avR~a~g--~~~~l~vDaN------~~~~-~~~A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~ipI 248 (382)
T 3dgb_A 183 HVIAIKKALG--DSASVRVDVN------QAWD-EAVALRACRILGGNGIDLI----EQPISRNNRAGMVRLNAS-SPAPI 248 (382)
T ss_dssp HHHHHHHHHG--GGSEEEEECT------TCBC-HHHHHHHHHHHHTTTCCCE----ECCBCTTCHHHHHHHHHH-CSSCE
T ss_pred HHHHHHHHcC--CCCeEEEeCC------CCCC-HHHHHHHHHHHhhcCcCee----eCCCCccCHHHHHHHHHh-CCCCE
Confidence 3455555431 1356777642 1122 1245567888888886544 455666899999999987 89999
Q ss_pred EeccccCCHHHHHHHHHc-CcCEEEEeccCCC-hHHHHHHHHHHHHcCCcEEEEc
Q 015899 243 LCKEFIVDAWQIYYARTK-GADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~-GADaVLLiaaiL~-~~~L~~Li~~a~~LGL~~LVEV 295 (398)
...+-+.+.+++.++... ++|.|.+...... -.+...+...|+..|+.+++-+
T Consensus 249 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 303 (382)
T 3dgb_A 249 MADESIECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGGT 303 (382)
T ss_dssp EESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 999999999999888765 5899988877664 3557888899999999998654
No 455
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=88.90 E-value=0.29 Score=49.31 Aligned_cols=78 Identities=15% Similarity=0.116 Sum_probs=58.3
Q ss_pred CHHHHHHHHHHcC------CcEEEEecc---C----C--cCC-C--CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHH
Q 015899 198 DPVEIARSYEKGG------AACLSILTD---E----K--YFK-G--SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYART 259 (398)
Q Consensus 198 dp~~iA~aY~~~G------A~aISVLTd---~----~--~F~-G--s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~ 259 (398)
+..++|+.+++.| ++.|+|..- . . ++. | ..+.+..||+. +++||+.-..| ++.+..++..
T Consensus 261 ~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~-~~iPvi~~G~i-~~~~a~~~l~ 338 (402)
T 2hsa_B 261 LGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNA-YQGTFICSGGY-TRELGIEAVA 338 (402)
T ss_dssp HHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHH-CSSCEEEESSC-CHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHH-CCCCEEEeCCC-CHHHHHHHHH
Confidence 3678899999999 999999531 1 1 111 1 23456778887 89999977766 9999999998
Q ss_pred cC-cCEEEEeccCCChHHH
Q 015899 260 KG-ADAVLLIAAVLPDLDI 277 (398)
Q Consensus 260 ~G-ADaVLLiaaiL~~~~L 277 (398)
.| ||.|.+.-..+.+.++
T Consensus 339 ~g~aD~V~igR~~l~dP~l 357 (402)
T 2hsa_B 339 QGDADLVSYGRLFISNPDL 357 (402)
T ss_dssp TTSCSEEEESHHHHHCTTH
T ss_pred CCCCceeeecHHHHhCchH
Confidence 88 9999998777765444
No 456
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=88.86 E-value=1.5 Score=43.33 Aligned_cols=119 Identities=12% Similarity=0.106 Sum_probs=85.3
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. .....+..+.-. -+. ..+..++++.+++.|...| |+.+-..+++.+..+|+. +++||
T Consensus 182 ~v~avR~a~--g~~~~l~vDaN~------~~~-~~~A~~~~~~l~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~ipI 247 (381)
T 3fcp_A 182 HTRAIVEAL--GDRASIRVDVNQ------AWD-AATGAKGCRELAAMGVDLI----EQPVSAHDNAALVRLSQQ-IETAI 247 (381)
T ss_dssp HHHHHHHHT--CTTCEEEEECTT------CBC-HHHHHHHHHHHHHTTCSEE----ECCBCTTCHHHHHHHHHH-SSSEE
T ss_pred HHHHHHHHc--CCCCeEEEECCC------CCC-HHHHHHHHHHHhhcCccce----eCCCCcccHHHHHHHHHh-CCCCE
Confidence 345555542 123567776521 122 1245567888888886554 555667899999999987 89999
Q ss_pred EeccccCCHHHHHHHHHc-CcCEEEEeccCCC-hHHHHHHHHHHHHcCCcEEEEc
Q 015899 243 LCKEFIVDAWQIYYARTK-GADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~-GADaVLLiaaiL~-~~~L~~Li~~a~~LGL~~LVEV 295 (398)
...+-+.+.+++.++... ++|.|.+...... -.+..++...|+..|+.+++-+
T Consensus 248 a~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 302 (381)
T 3fcp_A 248 LADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGT 302 (381)
T ss_dssp EESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECC
T ss_pred EECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCC
Confidence 999999999999988776 5888888776553 2457888899999999998654
No 457
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=88.86 E-value=1.7 Score=39.37 Aligned_cols=196 Identities=12% Similarity=-0.022 Sum_probs=106.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeccCCc---CCCCHHHHHHHHhcCCCCcEE--e--ccccCCH-----------HHHHH
Q 015899 195 EDFDPVEIARSYEKGGAACLSILTDEKY---FKGSFENLEAVRSAGVKCPLL--C--KEFIVDA-----------WQIYY 256 (398)
Q Consensus 195 ~~~dp~~iA~aY~~~GA~aISVLTd~~~---F~Gs~edL~~Ir~a~v~lPVL--~--KDFIid~-----------~QI~e 256 (398)
...++.+..+...+.|.++|-+...... ...+.+.++...+. ..+.+. . -+|.-+. ..|..
T Consensus 14 ~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 92 (281)
T 3u0h_A 14 DETSLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQR-RGLVLANLGLPLNLYDSEPVFLRELSLLPDRARL 92 (281)
T ss_dssp TCCCHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHT-TTCEECCEECCSCTTSCHHHHHHHHHTHHHHHHH
T ss_pred cCCCHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHH-cCCceEEecccccccCCCHHHHHHHHHHHHHHHH
Confidence 3567778888888888888877543210 11233444433222 344432 1 1222111 14667
Q ss_pred HHHcCcCEEEEecc---CCCh--------HHHHHHHHHHHHcCCcEEEEcC--------------CHHHHHHHhccCCCc
Q 015899 257 ARTKGADAVLLIAA---VLPD--------LDIRYMTKICKLLGLTALVEVH--------------DEREMDRVLGIEGIE 311 (398)
Q Consensus 257 Ar~~GADaVLLiaa---iL~~--------~~L~~Li~~a~~LGL~~LVEVh--------------t~eEl~rAl~l~Ga~ 311 (398)
|...||..|..... -.+. +.|.++.++|+..|+...+|.| |.+++.+.++.-+.+
T Consensus 93 A~~lG~~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~ 172 (281)
T 3u0h_A 93 CARLGARSVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPLGMRVGLEYVGPHHLRHRRYPFVQSLADLKTFWEAIGAP 172 (281)
T ss_dssp HHHTTCCEEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCGGGCCSSEECCCSHHHHHHHHHHHCCT
T ss_pred HHHcCCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHcCCEEEEEeccccccccccccccCCHHHHHHHHHHcCCC
Confidence 88999999885321 1111 3366777777889999999976 567776666532445
Q ss_pred EEeecc--ccCcccccChhhHHHH-hhhhccccccc----------CCceEEEecCCCCHHHHHHHHHcCCCEEEEcccc
Q 015899 312 LIGINN--RNLETFEVDNSNTKKL-LEGERGEIIRQ----------KNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 378 (398)
Q Consensus 312 iIGINn--RdL~tf~vDl~~t~~L-~~~i~~~~i~~----------~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 378 (398)
-+|++- .++.....|+....+. .+.+.--.+.. .+...+.+|-|.=.+-+..+.+.|+++.++=|.+
T Consensus 173 ~vg~~~D~~h~~~~g~~~~~~~~~~~~~i~~vHl~D~~~~~~~~~~~~~~~~G~G~id~~~~~~~L~~~gy~g~~~lE~~ 252 (281)
T 3u0h_A 173 NVGALVDSYHWYTAGEHEDDLAQLPPEKVVYVHINDTRDAPEDAHDGKRLLPGDGRIPLVPFLRGLYLAGYRGPVAAEVL 252 (281)
T ss_dssp TEEEEEEHHHHHHTTCCHHHHHTSCGGGEEEEEECBCSSCTTTCCTTSCBCTTSSSSCHHHHHHHHHHHTCCSEEEECCC
T ss_pred CeeEEeehhHHHHcCCCHHHHHhcCcccEEEEEecCCCCCcccchhccCcCCCCcCcCHHHHHHHHHHcCCCCcEEEEec
Confidence 677761 1111112344433332 11111001100 1122345555655666788889999999888876
Q ss_pred cC---CCChHHHHHhh
Q 015899 379 VK---QDDPGKGITGL 391 (398)
Q Consensus 379 mk---~~dp~~~i~~L 391 (398)
.. ..+|...++.-
T Consensus 253 ~~~~~~~~~~~~~~~~ 268 (281)
T 3u0h_A 253 HETPLDGTGESRARLV 268 (281)
T ss_dssp CSSCCSSCHHHHHHHH
T ss_pred ChhhccCCHHHHHHHH
Confidence 43 35676666543
No 458
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=88.74 E-value=0.82 Score=46.34 Aligned_cols=118 Identities=11% Similarity=0.106 Sum_probs=84.4
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. .....|..+.- .| +. ..+..++++.+++.|...| |+..-..+++.+..+|+. +++||
T Consensus 192 ~v~avR~av--G~d~~L~vDan-----~~-~t-~~~A~~~~~~Le~~~i~~i----EeP~~~~~~~~~~~l~~~-~~iPI 257 (433)
T 3rcy_A 192 FCRKIRAAV--GDKADLLFGTH-----GQ-FT-TAGAIRLGQAIEPYSPLWY----EEPVPPDNVGAMAQVARA-VRIPV 257 (433)
T ss_dssp HHHHHHHHH--TTSSEEEECCC-----SC-BC-HHHHHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-SSSCE
T ss_pred HHHHHHHHh--CCCCeEEEeCC-----CC-CC-HHHHHHHHHHhhhcCCCEE----ECCCChhhHHHHHHHHhc-cCCCE
Confidence 345566543 12356666531 11 22 2244567888888887765 344556789999999997 89999
Q ss_pred EeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEE
Q 015899 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVE 294 (398)
...+-+.++++..++...| +|.|.+...-... .+...+...|+..|+.+++-
T Consensus 258 a~dE~~~~~~~~~~~l~~g~~D~v~~d~~~~GGit~~~kia~lA~~~gv~~~~h 311 (433)
T 3rcy_A 258 ATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPH 311 (433)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHTTTCEECCC
T ss_pred EecCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEec
Confidence 9999999999999998776 8998887776654 45778888899999987643
No 459
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=88.68 E-value=0.85 Score=45.42 Aligned_cols=118 Identities=16% Similarity=0.141 Sum_probs=82.8
Q ss_pred HHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEE
Q 015899 164 IGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL 243 (398)
Q Consensus 164 ~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL 243 (398)
..++++.. .....|..+.- |-+. ..+..++++.+++.|...| |+.+-..+++.++.+++. +++||.
T Consensus 200 v~avRea~--G~d~~l~vDan------~~~~-~~~a~~~~~~l~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPIa 265 (410)
T 2qq6_A 200 VAAVREAV--GPEVEVAIDMH------GRFD-IPSSIRFARAMEPFGLLWL----EEPTPPENLDALAEVRRS-TSTPIC 265 (410)
T ss_dssp HHHHHHHH--CSSSEEEEECT------TCCC-HHHHHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHTT-CSSCEE
T ss_pred HHHHHHhc--CCCCEEEEECC------CCCC-HHHHHHHHHHHhhcCCCeE----ECCCChhhHHHHHHHHhh-CCCCEE
Confidence 44555432 12356777652 2121 1234566777777776643 344555789999999986 899999
Q ss_pred eccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEc
Q 015899 244 CKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 244 ~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEV 295 (398)
..+-+.+++++.++...| +|.|.+...-... .+..++.+.|+..|+.+++-+
T Consensus 266 ~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~ 319 (410)
T 2qq6_A 266 AGENVYTRFDFRELFAKRAVDYVMPDVAKCGGLAEAKRIANLAELDYIPFAPHN 319 (410)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBC
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 999999999999998776 7888887665543 457788889999999987743
No 460
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=88.57 E-value=0.81 Score=45.58 Aligned_cols=124 Identities=17% Similarity=0.156 Sum_probs=87.3
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. .....|..+.- |-+. ..+..++++.+++.|...| |+.+-.++++.+..+|+. +++||
T Consensus 208 ~v~avR~a~--G~~~~l~vDaN------~~~~-~~~A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 273 (390)
T 3ugv_A 208 TAEAVWDAV--GRDTALMVDFN------QGLD-MAEAMHRTRQIDDLGLEWI----EEPVVYDNFDGYAQLRHD-LKTPL 273 (390)
T ss_dssp HHHHHHHHH--CTTSEEEEECT------TCCC-HHHHHHHHHHHTTSCCSEE----ECCSCTTCHHHHHHHHHH-CSSCE
T ss_pred HHHHHHHHh--CCCCEEEEECC------CCCC-HHHHHHHHHHHHhhCCCEE----ECCCCcccHHHHHHHHHh-cCCCE
Confidence 345565543 12456777642 1121 1234567788888776655 455666789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEcCCHHHHH
Q 015899 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHDEREMD 302 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEVht~eEl~ 302 (398)
...+-+.+.+++..+...| +|.|.+....... .+...+...|+..|+.++ +|..-+.-
T Consensus 274 a~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~--~h~~~~a~ 333 (390)
T 3ugv_A 274 MIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGWMRAAGVAGAWGIPMS--THLYPEVG 333 (390)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHHHTCCBC--CBSCHHHH
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEe--ecCHHHHH
Confidence 9999999999999988776 7888887776654 457788889999999976 45554443
No 461
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=88.49 E-value=1.2 Score=44.26 Aligned_cols=91 Identities=11% Similarity=0.089 Sum_probs=71.1
Q ss_pred CHHHHHHHHHHcCC--cEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-
Q 015899 198 DPVEIARSYEKGGA--ACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP- 273 (398)
Q Consensus 198 dp~~iA~aY~~~GA--~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~- 273 (398)
+..++++.+++.|. ..| |+.+-.++++.+..+|+. +++|| .+-+.+++++.++...| +|.|.+......
T Consensus 202 ~A~~~~~~l~~~~i~~~~i----EqP~~~~d~~~~~~l~~~-~~iPI--dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GG 274 (391)
T 3gd6_A 202 DAHRAIKRLTKYDLGLEMI----ESPAPRNDFDGLYQLRLK-TDYPI--SEHVWSFKQQQEMIKKDAIDIFNISPVFIGG 274 (391)
T ss_dssp HHHHHHHHHTTCCSSCCEE----ECCSCTTCHHHHHHHHHH-CSSCE--EEECCCHHHHHHHHHHTCCSEEEECHHHHTS
T ss_pred HHHHHHHHHHhcCCCccee----cCCCChhhHHHHHHHHHH-cCCCc--CCCCCCHHHHHHHHHcCCCCEEEECchhcCC
Confidence 44567788888776 444 344556789999999987 89999 66788999998887665 799999877764
Q ss_pred hHHHHHHHHHHHHcCCcEEEEc
Q 015899 274 DLDIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 274 ~~~L~~Li~~a~~LGL~~LVEV 295 (398)
-.+...+...|+..|+.+++-+
T Consensus 275 it~~~~ia~~A~~~gi~~~~~~ 296 (391)
T 3gd6_A 275 LTSAKKAAYAAEVASKDVVLGT 296 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHHcCCEEEecC
Confidence 3457888999999999988754
No 462
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=88.42 E-value=17 Score=34.40 Aligned_cols=162 Identities=15% Similarity=0.119 Sum_probs=96.9
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCHH-HHHHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCcCEEEEec
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFE-NLEAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~e-dL~~I---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (398)
.++++.+.++|+++|-++ |--+++.=+.+ ..+.+ ++. .-.+||+..=.-.+.. +...|..+|||+|++..
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 103 (289)
T 2yxg_A 24 EENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSIT 103 (289)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 355667789999999987 22222222333 22222 322 2369999654433433 23456678999999988
Q ss_pred cCC---ChHH-HHHHHHHHHHcCCcEEEE-------c-CCHHHHHHHh-ccCCCcEEeeccccCcccccChhhHHHHhhh
Q 015899 270 AVL---PDLD-IRYMTKICKLLGLTALVE-------V-HDEREMDRVL-GIEGIELIGINNRNLETFEVDNSNTKKLLEG 336 (398)
Q Consensus 270 aiL---~~~~-L~~Li~~a~~LGL~~LVE-------V-ht~eEl~rAl-~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~ 336 (398)
-.. +++. .+++-..|...++.+++= + -+.+.+.+.. +. ..++||-. -.-|+....+++..
T Consensus 104 P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pnivgiK~-----s~gd~~~~~~~~~~ 176 (289)
T 2yxg_A 104 PYYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLAEEY--SNISAVKE-----ANPNLSQVSELIHD 176 (289)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHC--TTEEEEEE-----CCSCTHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHHhC--CCEEEEEe-----CCCCHHHHHHHHHh
Confidence 754 4555 445556677778887652 1 1556666655 44 47999972 22466677777653
Q ss_pred hcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015899 337 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 337 i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 380 (398)
. +..+. +|-. +.+.....+|++|++-|.+=+-
T Consensus 177 -----~---~f~v~--~G~d--~~~~~~l~~G~~G~is~~~n~~ 208 (289)
T 2yxg_A 177 -----A---KITVL--SGND--ELTLPIIALGGKGVISVVANIV 208 (289)
T ss_dssp -----T---CSEEE--ESCG--GGHHHHHHTTCCEEEESGGGTC
T ss_pred -----C---CeEEE--ECcH--HHHHHHHHCCCCEEEeChhhhh
Confidence 1 33333 3432 2345566799999999887554
No 463
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=88.28 E-value=1.1 Score=45.16 Aligned_cols=100 Identities=14% Similarity=0.084 Sum_probs=57.1
Q ss_pred HHHHHHHHHHcC--CcEEEEcCCH-HHHHHHhcc--C--CCcEEeeccccCcccccChhhHHH-HhhhhcccccccCCce
Q 015899 277 IRYMTKICKLLG--LTALVEVHDE-REMDRVLGI--E--GIELIGINNRNLETFEVDNSNTKK-LLEGERGEIIRQKNII 348 (398)
Q Consensus 277 L~~Li~~a~~LG--L~~LVEVht~-eEl~rAl~l--~--Ga~iIGINnRdL~tf~vDl~~t~~-L~~~i~~~~i~~~~v~ 348 (398)
.+.+-...+..+ ..+.+||.|. ++++.|++. . +++.|-.-|-+.. .-|+....+ +.+.+....+ +.+.
T Consensus 197 ~~A~~~~~~~~p~~~~~~vlvDT~d~~~~~al~~a~~l~~~d~IrlDs~~~~--~gd~~~~v~~v~~~ld~~G~--~~~~ 272 (398)
T 2i1o_A 197 EEAWKLTLENTKNGQKSVLLIDTYMDEKFAAIKIAEMFDKVDYIRLDTPSSR--RGNFEALIREVRWELALRGR--SDIK 272 (398)
T ss_dssp HHHHHHHHHTCCTTSCCEEECCSSSCHHHHHHHHHTTCSCCCEEEECCCGGG--CSCHHHHHHHHHHHHHHTTC--TTSE
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCchHHHHHHHHHHHhhcCCcEEEeCCCCCC--cccHHHHHHHHHHHHHhCCC--CceE
Confidence 344444444444 3366777665 344444432 2 5667666653210 013222222 2211100112 2478
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 349 VVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 349 vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
+++.||| +.+.+..+.+.|+|.+-||+.+...
T Consensus 273 I~aSggl-~~~~i~~l~~~GvD~~gvGt~l~~~ 304 (398)
T 2i1o_A 273 IMVSGGL-DENTVKKLREAGAEAFGVGTSISSA 304 (398)
T ss_dssp EEEESSC-CHHHHHHHHHTTCCEEEECHHHHTC
T ss_pred EEEeCCC-CHHHHHHHHHcCCCEEEeCcccCCC
Confidence 9999999 8999999999999999999988754
No 464
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=88.28 E-value=0.41 Score=46.96 Aligned_cols=120 Identities=10% Similarity=0.104 Sum_probs=87.0
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. .....+..+.- |-+. ..+..++++.+++.|...| |+.+-.++++.+..+|+. +++||
T Consensus 173 ~v~avR~~~--g~~~~l~vDan------~~~~-~~~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 238 (356)
T 3ro6_B 173 RLRRLHETL--AGRAVVRVDPN------QSYD-RDGLLRLDRLVQELGIEFI----EQPFPAGRTDWLRALPKA-IRRRI 238 (356)
T ss_dssp HHHHHHHHH--TTSSEEEEECT------TCCC-HHHHHHHHHHHHHTTCCCE----ECCSCTTCHHHHHTSCHH-HHHTE
T ss_pred HHHHHHHHh--CCCCEEEEeCC------CCCC-HHHHHHHHHHHHhcCCCEE----ECCCCCCcHHHHHHHHhc-CCCCE
Confidence 345555543 12456777642 1121 1244567888898887665 455666789999999876 78999
Q ss_pred EeccccCCHHHHHHHHHcC--cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEcC
Q 015899 243 LCKEFIVDAWQIYYARTKG--ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVH 296 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~G--ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEVh 296 (398)
...+-+.+++++.+....| +|.|.+....... .+..++...|+..|+.+++-+.
T Consensus 239 a~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~ 295 (356)
T 3ro6_B 239 AADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARRIATIAETAGIDLMWGCM 295 (356)
T ss_dssp EESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHHHHHHHHHHTCEEEECCC
T ss_pred EeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 9999999999999888765 9999998776643 4578888999999999987654
No 465
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=88.26 E-value=4.9 Score=39.24 Aligned_cols=168 Identities=14% Similarity=0.123 Sum_probs=98.4
Q ss_pred CCCHHHHHHHHHHcCCcEEEEe-------ccCCc---CCCCHHHHHHHHhcCCCCcEEec---cccCCHHHHHHHHHcCc
Q 015899 196 DFDPVEIARSYEKGGAACLSIL-------TDEKY---FKGSFENLEAVRSAGVKCPLLCK---EFIVDAWQIYYARTKGA 262 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVL-------Td~~~---F~Gs~edL~~Ir~a~v~lPVL~K---DFIid~~QI~eAr~~GA 262 (398)
..+-.++++.+.+.|+..|=+= .++.| -.+.++.++.+++...+.|+..- .. -.+..+..|.++|+
T Consensus 29 ~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~-~~~~~i~~a~~aGv 107 (345)
T 1nvm_A 29 LDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGI-GSVHDLKNAYQAGA 107 (345)
T ss_dssp HHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTT-BCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCc-ccHHHHHHHHhCCc
Confidence 3456778889999999988872 12211 12456677777764235565321 21 13556888999999
Q ss_pred CEEEEeccCCChHHHHHHHHHHHHcCCcEEEEc-----CCHHHHHH----HhccCCCcEEeeccccCcccccChhhHHHH
Q 015899 263 DAVLLIAAVLPDLDIRYMTKICKLLGLTALVEV-----HDEREMDR----VLGIEGIELIGINNRNLETFEVDNSNTKKL 333 (398)
Q Consensus 263 DaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEV-----ht~eEl~r----Al~l~Ga~iIGINnRdL~tf~vDl~~t~~L 333 (398)
|.|.+-...=.-+...++++++++.|+.+..-+ .+.+.+.. +.++ |++.|.+....- ...++...++
T Consensus 108 d~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~-Ga~~i~l~DT~G---~~~P~~v~~l 183 (345)
T 1nvm_A 108 RVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESY-GATCIYMADSGG---AMSMNDIRDR 183 (345)
T ss_dssp CEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHH-TCSEEEEECTTC---CCCHHHHHHH
T ss_pred CEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHC-CCCEEEECCCcC---ccCHHHHHHH
Confidence 998875433233568899999999999886555 24444333 3444 888887763211 1135566666
Q ss_pred hhhhcccccccCCceEEEe-----cCCCCHHHHHHHHHcCCCEE
Q 015899 334 LEGERGEIIRQKNIIVVGE-----SGLFTPDDIAYVQEAGVKAV 372 (398)
Q Consensus 334 ~~~i~~~~i~~~~v~vVAE-----SGI~t~eD~~~l~~~GadaV 372 (398)
++.++.. + |+++++ +- .|.. ........++||+.|
T Consensus 184 v~~l~~~-~-~~~~pi-~~H~Hn~~G~a-vAn~laA~~aGa~~v 223 (345)
T 1nvm_A 184 MRAFKAV-L-KPETQV-GMHAHHNLSLG-VANSIVAVEEGCDRV 223 (345)
T ss_dssp HHHHHHH-S-CTTSEE-EEECBCTTSCH-HHHHHHHHHTTCCEE
T ss_pred HHHHHHh-c-CCCceE-EEEECCCccHH-HHHHHHHHHcCCCEE
Confidence 6654321 2 113333 32 2553 334455567887654
No 466
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=88.18 E-value=1.7 Score=41.93 Aligned_cols=175 Identities=16% Similarity=0.117 Sum_probs=98.6
Q ss_pred CHHHHHHHHHHcCCc---EEEEeccCCcCCCCHHHHHHHHhc--CCCCcEEeccc----------cCCHHHHHHHHHcCc
Q 015899 198 DPVEIARSYEKGGAA---CLSILTDEKYFKGSFENLEAVRSA--GVKCPLLCKEF----------IVDAWQIYYARTKGA 262 (398)
Q Consensus 198 dp~~iA~aY~~~GA~---aISVLTd~~~F~Gs~edL~~Ir~a--~v~lPVL~KDF----------Iid~~QI~eAr~~GA 262 (398)
...++++.+...-.. .+-|+.-|.|- +|..+++. +.++.|=..|. =|.+.++ +.+|+
T Consensus 42 ~~~~l~~~l~~~~~~~~~~vevvv~Pp~~-----~L~~v~~~~~~~~i~vgAQn~~~~~~GAfTGEIS~~mL---kd~G~ 113 (275)
T 3kxq_A 42 SLGELRAIAAGISSDLGRLFEALICVPAT-----LLSRAFDILGGENILLGGQNCHFDDYGPYTGDISAFML---KEAGA 113 (275)
T ss_dssp GHHHHHHHHHHHC----CCSEEEEECCTT-----THHHHHHHHTTSSSEEEESCCCSSSSBSCTTCCCHHHH---HHHTC
T ss_pred HHHHHHHHHHhhcccccCCceEEEeCCHH-----HHHHHHHHhcCCCceEEecccccccCCCccCcCCHHHH---HHcCC
Confidence 455666666543211 23444445554 67766543 13566655552 1555555 45699
Q ss_pred CEEEEeccC----C--ChHHHHHHHHHHHHcCCcEEEEcC-CHHH-------------HHHHhccCCCc-----------
Q 015899 263 DAVLLIAAV----L--PDLDIRYMTKICKLLGLTALVEVH-DERE-------------MDRVLGIEGIE----------- 311 (398)
Q Consensus 263 DaVLLiaai----L--~~~~L~~Li~~a~~LGL~~LVEVh-t~eE-------------l~rAl~l~Ga~----------- 311 (398)
+.|+|+.+= + +++.+..=++.|.+.||.++++|- +++| ++.++.. +++
T Consensus 114 ~~VIiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pIlCVGEtleeRe~g~t~~vv~~Ql~~~l~~-~~~~~~vVIAYEPV 192 (275)
T 3kxq_A 114 SHVIIGHSERRTVYQESDAIVRAKVQAAWRAGLVALICVGETLEERKSNKVLDVLTRQLEGSLPD-GATAENIIIAYEPV 192 (275)
T ss_dssp SEEEESCHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHSCT-TCCTTTEEEEECCC
T ss_pred CEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHCCCHHHHHHHHHHHHHcC-CcccCCEEEEECCh
Confidence 999999983 3 455677777889999999999996 4443 3334431 221
Q ss_pred -EEeeccccCcccccChhhHHHHhhhhcccc---c--ccCCceEEEecCCCCHHHHHHHHHc-CCCEEEEcccccCCCCh
Q 015899 312 -LIGINNRNLETFEVDNSNTKKLLEGERGEI---I--RQKNIIVVGESGLFTPDDIAYVQEA-GVKAVLVGESIVKQDDP 384 (398)
Q Consensus 312 -iIGINnRdL~tf~vDl~~t~~L~~~i~~~~---i--~~~~v~vVAESGI~t~eD~~~l~~~-GadaVLVGeaLmk~~dp 384 (398)
-||+.. ..+.+...+....+|.-. + ....+.++-.|.+ +|+.+..++.. .+||+|||.+=.++++-
T Consensus 193 WAIGTGk------tAt~e~aqevh~~IR~~l~~~~~~~a~~~rIlYGGSV-~~~Na~el~~~~dIDG~LVGgASL~~~~F 265 (275)
T 3kxq_A 193 WAVGTGN------TATSADVAEVHAFIHHKMHSRFGDEGAKIRLLYGGSV-KPSNAFELLSTAHVNGALIGGASLKAIDF 265 (275)
T ss_dssp C--------------CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEECSCC-CTTTHHHHHTSTTCCEEEESGGGSSHHHH
T ss_pred hhhcCCC------CCCHHHHHHHHHHHHHHHHHhhhhhcccceEEEcCCc-CHhHHHHHHcCCccceEEeehhhcCHHHH
Confidence 334321 113344433333322110 0 0134567766666 77888877755 89999999998876554
Q ss_pred HHHH
Q 015899 385 GKGI 388 (398)
Q Consensus 385 ~~~i 388 (398)
...+
T Consensus 266 ~~Ii 269 (275)
T 3kxq_A 266 LTIC 269 (275)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 3333
No 467
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=88.15 E-value=5.7 Score=32.63 Aligned_cols=97 Identities=20% Similarity=0.193 Sum_probs=63.7
Q ss_pred HHHHHHHHHHcCCcEEEEcCCHHHHHHHhccC--CCcEEeeccccCcccccC-hhhHHHHhhhhcccccccCCceEEEec
Q 015899 277 IRYMTKICKLLGLTALVEVHDEREMDRVLGIE--GIELIGINNRNLETFEVD-NSNTKKLLEGERGEIIRQKNIIVVGES 353 (398)
Q Consensus 277 L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~--Ga~iIGINnRdL~tf~vD-l~~t~~L~~~i~~~~i~~~~v~vVAES 353 (398)
...+.+.....|..+...+.+.+++...+.-. .+++|=+.. ++.+ .| ++...+|... ..++.+|.-+
T Consensus 49 ~~~l~~~L~~~g~~v~~~~~~~~~al~~l~~~~~~~dliilD~-~l~~--~~g~~~~~~lr~~-------~~~~~ii~ls 118 (157)
T 3hzh_A 49 VKQLTQIFTSEGFNIIDTAADGEEAVIKYKNHYPNIDIVTLXI-TMPK--MDGITCLSNIMEF-------DKNARVIMIS 118 (157)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGCCEEEECS-SCSS--SCHHHHHHHHHHH-------CTTCCEEEEE
T ss_pred HHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCCCCCEEEEec-cCCC--ccHHHHHHHHHhh-------CCCCcEEEEe
Confidence 44444555678998866899999988877643 456666652 2221 12 3334444332 1356788888
Q ss_pred CCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHH
Q 015899 354 GLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGI 388 (398)
Q Consensus 354 GI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i 388 (398)
+-.+.+.+..+.++|++++|. |+-++...+
T Consensus 119 ~~~~~~~~~~~~~~g~~~~l~-----KP~~~~~l~ 148 (157)
T 3hzh_A 119 ALGKEQLVKDCLIKGAKTFIV-----KPLDRAKVL 148 (157)
T ss_dssp SCCCHHHHHHHHHTTCSEEEE-----SSCCHHHHH
T ss_pred ccCcHHHHHHHHHcCCCEEEe-----CCCCHHHHH
Confidence 999999999999999999854 555554443
No 468
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=88.13 E-value=1.4 Score=42.66 Aligned_cols=86 Identities=13% Similarity=0.300 Sum_probs=66.7
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEec
Q 015899 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGES 353 (398)
Q Consensus 274 ~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAES 353 (398)
.+.|+.|.++++++||.++.|+++.+.++.+.+ .++++-|..++.+++. ...++.+ .+.+|+..-
T Consensus 75 ~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~--~vd~~kIgA~~~~n~~----Ll~~~a~---------~~kPV~lk~ 139 (292)
T 1o60_A 75 EEGLKIFQELKDTFGVKIITDVHEIYQCQPVAD--VVDIIQLPAFLARQTD----LVEAMAK---------TGAVINVKK 139 (292)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHT--TCSEEEECGGGTTCHH----HHHHHHH---------TTCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHh--cCCEEEECcccccCHH----HHHHHHc---------CCCcEEEeC
Confidence 456899999999999999999999999999877 4899999998887754 3334432 367899999
Q ss_pred CCC-CHHHHHHH----HHcCC-CEEEE
Q 015899 354 GLF-TPDDIAYV----QEAGV-KAVLV 374 (398)
Q Consensus 354 GI~-t~eD~~~l----~~~Ga-daVLV 374 (398)
|.. |++++... ...|. +.+|+
T Consensus 140 G~~~t~~ei~~Av~~i~~~Gn~~i~L~ 166 (292)
T 1o60_A 140 PQFLSPSQMGNIVEKIEECGNDKIILC 166 (292)
T ss_dssp CTTSCGGGHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 997 88887554 55687 44444
No 469
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=88.12 E-value=2.9 Score=40.75 Aligned_cols=138 Identities=14% Similarity=0.062 Sum_probs=88.0
Q ss_pred CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEEcC---CHHHHH
Q 015899 226 SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMD 302 (398)
Q Consensus 226 s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVEVh---t~eEl~ 302 (398)
++..|..+++. ..+|++.-= .|+.++..+... +|.+-+.+.-+.+.+ |++.+..+|..+++.-. +.+|+.
T Consensus 100 GL~~L~~~~~e-~GLpv~Tev--~D~~~v~~l~~~-vd~lkIgA~~~~n~~---LLr~va~~gkPVilK~Gms~t~~ei~ 172 (298)
T 3fs2_A 100 ALEVFSDLKKE-YGFPVLTDI--HTEEQCAAVAPV-VDVLQIPAFLCRQTD---LLIAAARTGRVVNVKKGQFLAPWDMK 172 (298)
T ss_dssp HHHHHHHHHHH-HCCCEEEEC--CSHHHHHHHTTT-CSEEEECGGGTTCHH---HHHHHHHTTSEEEEECCTTCCGGGHH
T ss_pred HHHHHHHHHHh-cCCeEEEEe--CCHHHHHHHHhh-CCEEEECccccCCHH---HHHHHHccCCcEEEeCCCCCCHHHHH
Confidence 35566667665 789999654 599999988777 999988887776643 55556688999998874 677776
Q ss_pred HHhcc---CCCcEEeec----cccCcccccChhhHHHHhhhhcccccccCCceEEEe---------------cCCCC--H
Q 015899 303 RVLGI---EGIELIGIN----NRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGE---------------SGLFT--P 358 (398)
Q Consensus 303 rAl~l---~Ga~iIGIN----nRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAE---------------SGI~t--~ 358 (398)
.|++. .|.+-|.+- ++.+.++.+|+.....|.+ .+++|+.- +|... +
T Consensus 173 ~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~---------~~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~ 243 (298)
T 3fs2_A 173 NVLAKITESGNPNVLATERGVSFGYNTLVSDMRALPIMAG---------LGAPVIFDATHSVQQPGGQGGSTGGQREFVE 243 (298)
T ss_dssp HHHHHHHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHT---------TTSCEEEEHHHHTCCCC--------CGGGHH
T ss_pred HHHHHHHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHH---------cCCcEEEcCCCccccCCcccCCCCCchhhHH
Confidence 66542 254423222 2344555678777555432 24556551 22111 3
Q ss_pred HHHHHHHHcCCCEEEEccccc
Q 015899 359 DDIAYVQEAGVKAVLVGESIV 379 (398)
Q Consensus 359 eD~~~l~~~GadaVLVGeaLm 379 (398)
.-......+||||++|-.-+.
T Consensus 244 ~~a~AAvAlGAdGl~IE~H~t 264 (298)
T 3fs2_A 244 TLARAAVAVGVAGFFIETHED 264 (298)
T ss_dssp HHHHHHHHHCCSEEEEEEESS
T ss_pred HHHHHHHHcCCCEEEEEecCC
Confidence 345566788999999976554
No 470
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=87.97 E-value=1.1 Score=43.62 Aligned_cols=81 Identities=20% Similarity=0.331 Sum_probs=63.1
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEec
Q 015899 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGES 353 (398)
Q Consensus 274 ~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAES 353 (398)
.+-|+.|.++++++||.++.|++|.+.++.+.++ ++++-|..++.+++. .-.++.+ .+.+|+..-
T Consensus 74 ~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~--vd~lkIgA~~~~n~~----LLr~~a~---------~gkPVilK~ 138 (288)
T 3tml_A 74 DEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASV--VDVLQTPAFLCRQTD----FIHACAR---------SGKPVNIKK 138 (288)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH--CSEEEECGGGTTCHH----HHHHHHT---------SSSCEEEEC
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh--CCEEEECcccccCHH----HHHHHHc---------cCCcEEEeC
Confidence 3458889999999999999999999999999885 799999988887754 2223322 467899999
Q ss_pred CCC-CHHHHHH----HHHcCC
Q 015899 354 GLF-TPDDIAY----VQEAGV 369 (398)
Q Consensus 354 GI~-t~eD~~~----l~~~Ga 369 (398)
|.+ |++|+.. +.+.|.
T Consensus 139 G~~~t~~e~~~ave~i~~~Gn 159 (288)
T 3tml_A 139 GQFLAPHDMKNVIDKARDAAR 159 (288)
T ss_dssp CTTCCTTHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCC
Confidence 995 9877644 455676
No 471
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=87.92 E-value=0.25 Score=49.22 Aligned_cols=76 Identities=18% Similarity=0.101 Sum_probs=57.9
Q ss_pred HHHHHHHHHHcCCcEEEEeccCCcCC-----CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCC
Q 015899 199 PVEIARSYEKGGAACLSILTDEKYFK-----GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL 272 (398)
Q Consensus 199 p~~iA~aY~~~GA~aISVLTd~~~F~-----Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL 272 (398)
..++|+.+++.|++.|+|-. ..+.+ ...+.+..+|+. +++||+.-..| ++.+..++...| ||.|.+.-.+|
T Consensus 258 ~~~la~~le~~Gvd~i~v~~-~~~~~~~~~~~~~~~~~~vr~~-~~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l 334 (376)
T 1icp_A 258 GLYMVESLNKYDLAYCHVVE-PRMKTAWEKIECTESLVPMRKA-YKGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFI 334 (376)
T ss_dssp HHHHHHHHGGGCCSEEEEEC-CSCCC------CCCCSHHHHHH-CCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcC-CcccCCCCccccHHHHHHHHHH-cCCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHH
Confidence 57899999999999999963 11111 123456788887 89999977766 899999999888 99999987777
Q ss_pred ChHHH
Q 015899 273 PDLDI 277 (398)
Q Consensus 273 ~~~~L 277 (398)
.+.++
T Consensus 335 ~~P~l 339 (376)
T 1icp_A 335 SNPDL 339 (376)
T ss_dssp HCTTH
T ss_pred hCccH
Confidence 55443
No 472
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=87.91 E-value=0.68 Score=43.83 Aligned_cols=114 Identities=15% Similarity=0.209 Sum_probs=72.0
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE-EeccccCCHHHHHHHHHcCcCEEEEeccC----
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL-LCKEFIVDAWQIYYARTKGADAVLLIAAV---- 271 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV-L~KDFIid~~QI~eAr~~GADaVLLiaai---- 271 (398)
.+|..+.+.+.++||+.|+|..|.. .--.+.++.+|+.+...=| |... +|.+..+....+.|.||+++--
T Consensus 96 ~~p~~~i~~~~~aGAd~itvH~Ea~--~~~~~~i~~ir~~G~k~Gvalnp~---Tp~e~l~~~l~~vD~VlvMsV~PGfg 170 (246)
T 3inp_A 96 KPVDALIESFAKAGATSIVFHPEAS--EHIDRSLQLIKSFGIQAGLALNPA---TGIDCLKYVESNIDRVLIMSVNPGFG 170 (246)
T ss_dssp SSCHHHHHHHHHHTCSEEEECGGGC--SCHHHHHHHHHTTTSEEEEEECTT---CCSGGGTTTGGGCSEEEEECSCTTC-
T ss_pred CCHHHHHHHHHHcCCCEEEEccccc--hhHHHHHHHHHHcCCeEEEEecCC---CCHHHHHHHHhcCCEEEEeeecCCCC
Confidence 3567888999999999999987653 1224678888876432212 1222 2223333334479999987532
Q ss_pred ----CCh--HHHHHHHHHHHHcCCcEEEEcC---CHHHHHHHhccCCCcEEeec
Q 015899 272 ----LPD--LDIRYMTKICKLLGLTALVEVH---DEREMDRVLGIEGIELIGIN 316 (398)
Q Consensus 272 ----L~~--~~L~~Li~~a~~LGL~~LVEVh---t~eEl~rAl~l~Ga~iIGIN 316 (398)
.+. +.++++-+...+.|.+..+||. +.+.+..+.++ ||+++-+.
T Consensus 171 GQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~a-GAD~~V~G 223 (246)
T 3inp_A 171 GQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVC-GVNAFVAG 223 (246)
T ss_dssp -CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTT-TCCEEEES
T ss_pred CcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHc-CCCEEEEe
Confidence 111 2355555555566888888875 67778888887 99977665
No 473
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=87.91 E-value=1.9 Score=42.75 Aligned_cols=120 Identities=11% Similarity=0.078 Sum_probs=84.1
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHH--cCCcEEEEeccCCcCCCCHHHHHHHHhcCCCC
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEK--GGAACLSILTDEKYFKGSFENLEAVRSAGVKC 240 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~--~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~l 240 (398)
...++++.. .....+..+.- |-+. ..+..++++.+++ .| +.-+-+| .-..+++.+..+|+. +.+
T Consensus 175 ~v~avR~a~--g~~~~L~vDaN------~~w~-~~~A~~~~~~l~~~~~~---l~~iEeP-~~~~d~~~~~~l~~~-~~i 240 (379)
T 3r0u_A 175 LLKALDNEF--SKNIKFRFDAN------QGWN-LAQTKQFIEEINKYSLN---VEIIEQP-VKYYDIKAMAEITKF-SNI 240 (379)
T ss_dssp HHHHHHHHC--CTTSEEEEECT------TCCC-HHHHHHHHHHHHTSCCC---EEEEECC-SCTTCHHHHHHHHHH-CSS
T ss_pred HHHHHHHhc--CCCCeEEEeCC------CCcC-HHHHHHHHHHHhhcCCC---cEEEECC-CCcccHHHHHHHHhc-CCC
Confidence 445566542 12356776631 1121 1244566777777 44 4444444 555789999999987 899
Q ss_pred cEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hHHHHHHHHHHHHcCCcEEEEcC
Q 015899 241 PLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEVH 296 (398)
Q Consensus 241 PVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~~LVEVh 296 (398)
||...+-+.+.+++..+...| +|.|.+...... -.+...+...|+..|+.+++-+.
T Consensus 241 PIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia~~A~~~gi~~~~~~~ 298 (379)
T 3r0u_A 241 PVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKIKKLADSAGISCMVGCM 298 (379)
T ss_dssp CEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CEEeCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEEeCC
Confidence 999999999999999988876 688888777664 34578889999999999987543
No 474
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=87.88 E-value=11 Score=34.51 Aligned_cols=195 Identities=12% Similarity=0.059 Sum_probs=108.0
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeccCCc-----CCCCHHHHHHHHhc--CCCCcE--Eec--c----cc-CCH-------
Q 015899 195 EDFDPVEIARSYEKGGAACLSILTDEKY-----FKGSFENLEAVRSA--GVKCPL--LCK--E----FI-VDA------- 251 (398)
Q Consensus 195 ~~~dp~~iA~aY~~~GA~aISVLTd~~~-----F~Gs~edL~~Ir~a--~v~lPV--L~K--D----FI-id~------- 251 (398)
...++.+..+...+.|.++|-+...... +.-+.+++..+++. ...+.+ ++- . +. .++
T Consensus 28 ~~~~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~ 107 (295)
T 3cqj_A 28 AGECWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGL 107 (295)
T ss_dssp CCSCHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHH
Confidence 3467888888888889999888654321 11244555555432 023443 321 1 11 122
Q ss_pred ----HHHHHHHHcCcCEEEEeccCC-----Ch-------HHHHHHHHHHHHcCCcEEEEcC------CHHHHHHHhccCC
Q 015899 252 ----WQIYYARTKGADAVLLIAAVL-----PD-------LDIRYMTKICKLLGLTALVEVH------DEREMDRVLGIEG 309 (398)
Q Consensus 252 ----~QI~eAr~~GADaVLLiaaiL-----~~-------~~L~~Li~~a~~LGL~~LVEVh------t~eEl~rAl~l~G 309 (398)
..+..|...||+.|.+-.... .+ +.|.++.++|+..|+.+.+|.| |.+++.+.++.-+
T Consensus 108 ~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~l~~~v~ 187 (295)
T 3cqj_A 108 EIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLN 187 (295)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCSSGGGCSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCCcccCCHHHHHHHHHhcC
Confidence 136677899999988743211 11 2367777888889999999976 4577776665324
Q ss_pred CcEEeeccccC---cccccChhhHH-HHhhhhccccccc--CC---ceEEEecCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015899 310 IELIGINNRNL---ETFEVDNSNTK-KLLEGERGEIIRQ--KN---IIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 380 (398)
Q Consensus 310 a~iIGINnRdL---~tf~vDl~~t~-~L~~~i~~~~i~~--~~---v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 380 (398)
.+-+|++ -|. .....|+.... ++.+.+.-=.+.. .+ ...+.+|-|.=.+-++.+.+.|+++.++=|....
T Consensus 188 ~~~vg~~-~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~~~g~~~~~p~G~G~id~~~~~~~L~~~gy~g~i~lE~~~~ 266 (295)
T 3cqj_A 188 NPWFQLY-PDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLKQSGYCGPYLIEMWSE 266 (295)
T ss_dssp CTTEEEE-CBHHHHHSSSCCHHHHHHHTGGGBCCEEECEEETTEEEEECTTSSSCCHHHHHHHHHHTTCCSCEEECCCGG
T ss_pred CCCeEEE-eccchHhhcCCCHHHHHHHhccceEEEEeecCCCCccCCcCCCCCccCHHHHHHHHHHCCCceeEEEEecCC
Confidence 4567776 222 11234543322 2322221101100 01 1122445555556677788899999888886554
Q ss_pred C-CChHHHHHh
Q 015899 381 Q-DDPGKGITG 390 (398)
Q Consensus 381 ~-~dp~~~i~~ 390 (398)
. .+|.+.+++
T Consensus 267 ~~~~~~~~~~~ 277 (295)
T 3cqj_A 267 TAEDPAAEVAK 277 (295)
T ss_dssp GSSCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 3 566555543
No 475
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=87.85 E-value=3.7 Score=37.48 Aligned_cols=120 Identities=13% Similarity=0.132 Sum_probs=75.4
Q ss_pred CCHHHHHHHHHHcCCcEEEEecc--CCcCCCCHHHHHHHHhc----CCCCcEEeccc--cCCH----------HHHHHHH
Q 015899 197 FDPVEIARSYEKGGAACLSILTD--EKYFKGSFENLEAVRSA----GVKCPLLCKEF--IVDA----------WQIYYAR 258 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd--~~~F~Gs~edL~~Ir~a----~v~lPVL~KDF--Iid~----------~QI~eAr 258 (398)
.++.+..+...+.|..+|-+... +.+...+..++..+++. ++.+..+.-.+ -.+. ..+..|.
T Consensus 15 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~ 94 (286)
T 3dx5_A 15 ISFTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILAN 94 (286)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHH
Confidence 57888888888999999988532 01111233555555442 23333332211 1110 1466788
Q ss_pred HcCcCEEEEeccCCCh------------HHHHHHHHHHHHcCCcEEEEcC------CHHHHHHHhccCCCcEEeec
Q 015899 259 TKGADAVLLIAAVLPD------------LDIRYMTKICKLLGLTALVEVH------DEREMDRVLGIEGIELIGIN 316 (398)
Q Consensus 259 ~~GADaVLLiaaiL~~------------~~L~~Li~~a~~LGL~~LVEVh------t~eEl~rAl~l~Ga~iIGIN 316 (398)
..||..|.+....... +.|.++.++|+..|+.+.+|.| +.+++.+.++.-+.+-+|++
T Consensus 95 ~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l~~~~~~~~vg~~ 170 (286)
T 3dx5_A 95 WFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLELLGEVDHPNLKIN 170 (286)
T ss_dssp HHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHHHHCCTTEEEE
T ss_pred HhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHHHHhcCCCCeEEE
Confidence 9999999876544321 3377778888899999999998 67888777764344567775
No 476
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=87.83 E-value=16 Score=33.32 Aligned_cols=148 Identities=16% Similarity=0.057 Sum_probs=79.9
Q ss_pred CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEecc---------------------C--CCh-HHH-HHH
Q 015899 226 SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---------------------V--LPD-LDI-RYM 280 (398)
Q Consensus 226 s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa---------------------i--L~~-~~L-~~L 280 (398)
+++-++.+|+. ++||+.=----+.....++..+||+..+.=-. + .++ ... ..+
T Consensus 63 G~~~~~~lr~~--~~pvi~lt~~~~~~~~~~a~~~Ga~dyl~Kp~~~~~~~~~~~~~~~~~~~~~~ILivDD~~~~~~~l 140 (259)
T 3luf_A 63 SGEAVKVLLER--GLPVVILTADISEDKREAWLEAGVLDYVMKDSRHSLQYAVGLVHRLYLNQQIEVLVVDDSRTSRHRT 140 (259)
T ss_dssp TSHHHHHHHHT--TCCEEEEECC-CHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred HHHHHHHHHhC--CCCEEEEEccCCHHHHHHHHHCCCcEEEeCCchhHHHHHHHhhhhHhhcCCCcEEEEeCCHHHHHHH
Confidence 45666666653 56765311113445556666777776654210 0 111 112 222
Q ss_pred HHHHHHcCCcEEEEcCCHHHHHHHhccCC-CcEEeeccccCcccccC-hhhHHHHhhhhcccccccCCceEEEecCCCCH
Q 015899 281 TKICKLLGLTALVEVHDEREMDRVLGIEG-IELIGINNRNLETFEVD-NSNTKKLLEGERGEIIRQKNIIVVGESGLFTP 358 (398)
Q Consensus 281 i~~a~~LGL~~LVEVht~eEl~rAl~l~G-a~iIGINnRdL~tf~vD-l~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~ 358 (398)
.......|.. +.++.|.+|+...+.... +++|=+. +.--..| ++...++... .+...+++|.-++-.+.
T Consensus 141 ~~~L~~~~~~-v~~a~~~~eal~~l~~~~~~dlvllD---~~mP~~dG~~l~~~lr~~-----~~~~~~~ii~~s~~~~~ 211 (259)
T 3luf_A 141 MAQLRKQLLQ-VHEASHAREALATLEQHPAIRLVLVD---YYMPEIDGISLVRMLRER-----YSKQQLAIIGISVSDKR 211 (259)
T ss_dssp HHHHHTTTCE-EEEESSHHHHHHHHHHCTTEEEEEEC---SCCSSSCHHHHHHHHHHH-----CCTTTSEEEEEECSSSS
T ss_pred HHHHHHcCcE-EEEeCCHHHHHHHHhcCCCCCEEEEc---CCCCCCCHHHHHHHHHhc-----cCCCCCeEEEEEccCCH
Confidence 2223344554 457788888777665312 3554332 1111222 3444444432 11135788888888899
Q ss_pred HHHHHHHHcCCCEEEEcccccCCCChHHHHH
Q 015899 359 DDIAYVQEAGVKAVLVGESIVKQDDPGKGIT 389 (398)
Q Consensus 359 eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~ 389 (398)
++..++.++|++++ |.|+-++.+...
T Consensus 212 ~~~~~a~~~Ga~~y-----l~KP~~~~~L~~ 237 (259)
T 3luf_A 212 GLSARYLKQGANDF-----LNQPFEPEELQC 237 (259)
T ss_dssp SHHHHHHHTTCSEE-----EESSCCHHHHHH
T ss_pred HHHHHHHhcChhhe-----EcCCCCHHHHHH
Confidence 99999999999987 556767655443
No 477
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=87.78 E-value=1.8 Score=43.17 Aligned_cols=92 Identities=14% Similarity=0.154 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-H
Q 015899 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-L 275 (398)
Q Consensus 198 dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~ 275 (398)
+..++++.+++.|...|- +..-..+++.+..+|+. +++||...+-+.++++..++...| +|.|.+....... .
T Consensus 225 ~A~~~~~~L~~~~i~~iE----eP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~~~~GGit 299 (400)
T 4dxk_A 225 PAMQIAKALTPYQTFWHE----DPIKMDSLSSLTRYAAV-SPAPISASETLGSRWAFRDLLETGAAGVVMLDISWCGGLS 299 (400)
T ss_dssp HHHHHHHHTGGGCCSEEE----CCBCTTSGGGHHHHHHH-CSSCEEECTTCCHHHHHHHHHHTTCCCEEEECTTTTTHHH
T ss_pred HHHHHHHHHhhcCCCEEE----cCCCcccHHHHHHHHHh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHH
Confidence 345567778887766553 33445688899999987 899999999999999999998886 7999998888765 4
Q ss_pred HHHHHHHHHHHcCCcEEEE
Q 015899 276 DIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 276 ~L~~Li~~a~~LGL~~LVE 294 (398)
+...+...|+..|+.+++-
T Consensus 300 ~~~kia~~A~~~gi~~~~h 318 (400)
T 4dxk_A 300 EARKIASMAEAWHLPVAPH 318 (400)
T ss_dssp HHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHcCCEEEec
Confidence 5788889999999998763
No 478
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=87.69 E-value=1.6 Score=40.43 Aligned_cols=80 Identities=14% Similarity=0.054 Sum_probs=58.7
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcCC----CCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHH-cCcCEEEEecc
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYFK----GSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYART-KGADAVLLIAA 270 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F~----Gs~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~-~GADaVLLiaa 270 (398)
.+|.++.+++ +.||+.|-+ |- |+++.|+.++.. + ++|++.=+. |++..+.+... .||++|. +.+
T Consensus 127 ~t~~e~~~A~-~~Gad~vk~------FPa~~~~G~~~lk~i~~~-~~~ipvvaiGG-I~~~N~~~~l~~~Ga~~v~-gSa 196 (225)
T 1mxs_A 127 STPSEIMMGY-ALGYRRFKL------FPAEISGGVAAIKAFGGP-FGDIRFCPTGG-VNPANVRNYMALPNVMCVG-TTW 196 (225)
T ss_dssp CSHHHHHHHH-TTTCCEEEE------TTHHHHTHHHHHHHHHTT-TTTCEEEEBSS-CCTTTHHHHHHSTTBCCEE-ECT
T ss_pred CCHHHHHHHH-HCCCCEEEE------ccCccccCHHHHHHHHhh-CCCCeEEEECC-CCHHHHHHHHhccCCEEEE-Ech
Confidence 4576765554 679999988 43 468999999986 6 899987665 56777888888 6999999 888
Q ss_pred CCChHH-----HHHHHHHHHH
Q 015899 271 VLPDLD-----IRYMTKICKL 286 (398)
Q Consensus 271 iL~~~~-----L~~Li~~a~~ 286 (398)
+...+. .+++.+.|++
T Consensus 197 i~~~~~i~~~~~~~i~~~a~~ 217 (225)
T 1mxs_A 197 MLDSSWIKNGDWARIEACSAE 217 (225)
T ss_dssp TSCHHHHHTTCHHHHHHHHHH
T ss_pred hcCchhhccCCHHHHHHHHHH
Confidence 886432 4455555543
No 479
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=87.66 E-value=4.6 Score=36.57 Aligned_cols=119 Identities=20% Similarity=0.117 Sum_probs=76.5
Q ss_pred CCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE--EeccccCCHH
Q 015899 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL--LCKEFIVDAW 252 (398)
Q Consensus 175 ~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV--L~KDFIid~~ 252 (398)
++..+..|+|...... ..-...+++...+.+-..++ .-+.+.|..+|+...++|+ +..+..
T Consensus 93 ~~~~l~iEiK~~~~~~-----~~~~~~v~~~l~~~~~v~i~--------Sf~~~~l~~~~~~~p~~~~~~l~~~~~---- 155 (224)
T 1vd6_A 93 PQAVFNVELKSFPGLG-----EEAARRLAALLRGREGVWVS--------SFDPLALLALRKAAPGLPLGFLMAEDH---- 155 (224)
T ss_dssp TTCEEEEEECCCTTSH-----HHHHHHHHHHTTTCSSEEEE--------ESCHHHHHHHHHHCTTSCEEEEESSCC----
T ss_pred CCceEEEEECCCCCcc-----HHHHHHHHHHHhcCCcEEEE--------eCCHHHHHHHHHHCCCCCEEEEecccc----
Confidence 3578999999543320 00122344444431111222 2468889999875356664 333321
Q ss_pred HHHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEEE-cCCHHHHHHHhccCCCcEEeec
Q 015899 253 QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGIELIGIN 316 (398)
Q Consensus 253 QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LVE-Vht~eEl~rAl~l~Ga~iIGIN 316 (398)
...+...|++.|......+++ ++++.++..|+.+++= |.+.+++.+..++ |++.|-+|
T Consensus 156 -~~~~~~~~~~~i~~~~~~~~~----~~v~~~~~~G~~v~~wtvn~~~~~~~l~~~-GvdgI~TD 214 (224)
T 1vd6_A 156 -SALLPCLGVEAVHPHHALVTE----EAVAGWRKRGLFVVAWTVNEEGEARRLLAL-GLDGLIGD 214 (224)
T ss_dssp -GGGGGGSCCSEEEEBGGGCCH----HHHHHHHHTTCEEEEECCCCHHHHHHHHHT-TCSEEEES
T ss_pred -HHHHHHcCCcEEecCcccCCH----HHHHHHHHCCCEEEEEeCCCHHHHHHHHhc-CCCEEEcC
Confidence 233456899999888777764 5788899999988554 5899999999998 99988666
No 480
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=87.58 E-value=11 Score=35.98 Aligned_cols=164 Identities=17% Similarity=0.171 Sum_probs=96.0
Q ss_pred HHHHHHHcCCcEEEEeccC-CcCCCC-----------HHHHHHHHhcCCCCcEEe-cccc--CCHHHHH----HHHHcCc
Q 015899 202 IARSYEKGGAACLSILTDE-KYFKGS-----------FENLEAVRSAGVKCPLLC-KEFI--VDAWQIY----YARTKGA 262 (398)
Q Consensus 202 iA~aY~~~GA~aISVLTd~-~~F~Gs-----------~edL~~Ir~a~v~lPVL~-KDFI--id~~QI~----eAr~~GA 262 (398)
.|+..+++|..+|-+=.+. .+..|- +.+.+.|.+. +++||+. -||. -++.++. +...+||
T Consensus 28 sA~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~-~~~pviaD~d~Gyg~~~~~~~~~v~~l~~aGa 106 (275)
T 2ze3_A 28 SARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRA-VAIPVNADIEAGYGHAPEDVRRTVEHFAALGV 106 (275)
T ss_dssp HHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHH-CSSCEEEECTTCSSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhh-cCCCEEeecCCCCCCCHHHHHHHHHHHHHcCC
Confidence 5666777777777653110 012231 1345566665 7899985 3444 4666554 3456899
Q ss_pred CEEEEeccC-------CChHHHHHHHHHHH----HcCCcEEEEcCCHH-----------HHHHH-------hccCCCcEE
Q 015899 263 DAVLLIAAV-------LPDLDIRYMTKICK----LLGLTALVEVHDER-----------EMDRV-------LGIEGIELI 313 (398)
Q Consensus 263 DaVLLiaai-------L~~~~L~~Li~~a~----~LGL~~LVEVht~e-----------El~rA-------l~l~Ga~iI 313 (398)
++|.|=-.. .+.++..+-++.+. ..|.+.++--+|.. .++.+ .++ ||+.|
T Consensus 107 agv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eA-GAd~i 185 (275)
T 2ze3_A 107 AGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYADA-GADGI 185 (275)
T ss_dssp SEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHT-TCSEE
T ss_pred cEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHHC-CCCEE
Confidence 999984332 34334434444444 34888877665433 23332 344 99988
Q ss_pred eeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 314 GINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 314 GINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
=+-.. +|.+...++.+.+. + | +.++.-.+..+. ..+.++|+.-|++|.++++..
T Consensus 186 ~~e~~------~~~~~~~~i~~~~~---~-P--~n~~~~~~~~~~---~eL~~lGv~~v~~~~~~~raa 239 (275)
T 2ze3_A 186 FVPLA------LQSQDIRALADALR---V-P--LNVMAFPGSPVP---RALLDAGAARVSFGQSLMLAT 239 (275)
T ss_dssp ECTTC------CCHHHHHHHHHHCS---S-C--EEEECCTTSCCH---HHHHHTTCSEEECTTHHHHHH
T ss_pred EECCC------CCHHHHHHHHHhcC---C-C--EEEecCCCCCCH---HHHHHcCCcEEEEChHHHHHH
Confidence 77541 45666777776632 1 2 333433455554 678889999999998877643
No 481
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=87.53 E-value=16 Score=33.20 Aligned_cols=178 Identities=12% Similarity=0.003 Sum_probs=99.4
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeccCCcCC-CCHHHHHHHHhcCCCCcEEe-ccccC-CHHHHHHH-HHcCcCEEEEec
Q 015899 194 REDFDPVEIARSYEKGGAACLSILTDEKYFK-GSFENLEAVRSAGVKCPLLC-KEFIV-DAWQIYYA-RTKGADAVLLIA 269 (398)
Q Consensus 194 ~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~-Gs~edL~~Ir~a~v~lPVL~-KDFIi-d~~QI~eA-r~~GADaVLLia 269 (398)
+.-.++. -|++..++||++|-..-.++.-. =+++..+.+.+. +.-.+.. .=|.- ++.+|.+. ...|.|.|=|-.
T Consensus 6 CGit~~e-da~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~-~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG 83 (203)
T 1v5x_A 6 CGITRLE-DALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEA-LGPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLHG 83 (203)
T ss_dssp CCCCCHH-HHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHH-SCSSSEEEEEESSCCHHHHHHHHHHTTCSEEEECS
T ss_pred cCCCcHH-HHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHh-CCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECC
Confidence 3334444 46666778999999983221111 145666666543 3211221 11332 44555544 568999999953
Q ss_pred cCCChHHHHHHHHHHHHcCCcEE--EEcCCHHHHHHHhccCCCcEEeeccc-cCcccccChhhHHHHhhhhcccccccCC
Q 015899 270 AVLPDLDIRYMTKICKLLGLTAL--VEVHDEREMDRVLGIEGIELIGINNR-NLETFEVDNSNTKKLLEGERGEIIRQKN 346 (398)
Q Consensus 270 aiL~~~~L~~Li~~a~~LGL~~L--VEVht~eEl~rAl~l~Ga~iIGINnR-dL~tf~vDl~~t~~L~~~i~~~~i~~~~ 346 (398)
. -+++.+..+ + . |+.+| +-+++.+++ .+... .++.+=+... .-+.-..|.+....+.. ..
T Consensus 84 ~-e~~~~~~~l-~---~-~~~vika~~v~~~~~l-~~~~~-~~d~~LlD~~~gGtG~~fdW~~l~~~~~---------~~ 146 (203)
T 1v5x_A 84 E-EPPEWAEAV-G---R-FYPVIKAFPLEGPARP-EWADY-PAQALLLDGKRPGSGEAYPRAWAKPLLA---------TG 146 (203)
T ss_dssp C-CCHHHHHHH-T---T-TSCEEEEEECSSSCCG-GGGGS-SCSEEEEECSSTTSCCCCCGGGGHHHHH---------TT
T ss_pred C-CCHHHHHHh-c---c-CCCEEEEEEcCChHhh-hhhhc-CCCEEEEcCCCCCCCCccCHHHHHhhhc---------cC
Confidence 3 355444443 2 1 56666 455665555 44443 3565544432 11222345554444211 13
Q ss_pred ceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC---CChHHHHHhhh
Q 015899 347 IIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ---DDPGKGITGLF 392 (398)
Q Consensus 347 v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~---~dp~~~i~~L~ 392 (398)
.+++..||| ||+.+..+...+++||=|.+.+-.. +|+. .+++++
T Consensus 147 ~p~~LAGGL-~peNV~~ai~~~p~gVDvsSGvE~~pG~KD~~-ki~~fi 193 (203)
T 1v5x_A 147 RRVILAGGI-APENLEEVLALRPYALDLASGVEEAPGVKSAE-KLRALF 193 (203)
T ss_dssp SCEEECSSC-CSTTHHHHHHHCCSEEEESGGGEEETTEECHH-HHHHHH
T ss_pred CcEEEECCC-CHHHHHHHHhcCCCEEEeCCceecCCCCcCHH-HHHHHH
Confidence 478999999 8999966657799999999999853 3543 344444
No 482
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=87.52 E-value=18 Score=34.16 Aligned_cols=161 Identities=13% Similarity=0.106 Sum_probs=93.8
Q ss_pred HHHHHHHHHcCCcEEEEe-ccCCcCCCCH-HHHHHHHhcCC-CCcEEeccccCCHH----HHHHHHHcCcCEEEEeccCC
Q 015899 200 VEIARSYEKGGAACLSIL-TDEKYFKGSF-ENLEAVRSAGV-KCPLLCKEFIVDAW----QIYYARTKGADAVLLIAAVL 272 (398)
Q Consensus 200 ~~iA~aY~~~GA~aISVL-Td~~~F~Gs~-edL~~Ir~a~v-~lPVL~KDFIid~~----QI~eAr~~GADaVLLiaaiL 272 (398)
.++++.+.++ +++|-++ |--+++.=+. |..+.++.. + .+||+..=.-.+.. ....|..+|||+|++..-..
T Consensus 22 ~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~-~~rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 99 (283)
T 2pcq_A 22 RELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRAL-RPRKPFLVGLMEETLPQAEGALLEAKAAGAMALLATPPRY 99 (283)
T ss_dssp HHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTC-CCSSCCEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCT
T ss_pred HHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHH-HhCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEecCCcC
Confidence 3456666777 8888886 2222332344 444444543 4 68998654333433 23456678999999988764
Q ss_pred ----ChHHHHHHH-HHHHHcCCcEEE-Ec-------CCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcc
Q 015899 273 ----PDLDIRYMT-KICKLLGLTALV-EV-------HDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERG 339 (398)
Q Consensus 273 ----~~~~L~~Li-~~a~~LGL~~LV-EV-------ht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~ 339 (398)
+++.+...+ ..|. ++.+++ .+ =+.+.+.+..+. ..++||-.. .-|+....+++. .
T Consensus 100 ~~~~~~~~l~~~f~~va~--~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgiKds-----sgd~~~~~~~~~-~-- 167 (283)
T 2pcq_A 100 YHGSLGAGLLRYYEALAE--KMPLFLYHVPQNTKVDLPLEAVEALAPH--PNVLGIKDS-----SGDLSRIAFYQA-R-- 167 (283)
T ss_dssp TGGGTTTHHHHHHHHHHH--HSCEEEEECHHHHCCCCCHHHHHHHTTS--TTEEEEEEC-----SCCHHHHHHHHH-H--
T ss_pred CCCCCHHHHHHHHHHHhc--CCCEEEEeCccccCcCCCHHHHHHHhcC--CCEEEEEEC-----CCCHHHHHHHHh-c--
Confidence 444444444 4444 777755 21 155666665553 579999732 246666667665 2
Q ss_pred cccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015899 340 EIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 382 (398)
Q Consensus 340 ~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 382 (398)
+.+..+. +|-. +.+.....+|++|++-|.+=+-++
T Consensus 168 ----~~~f~v~--~G~d--~~~~~~l~~G~~G~is~~~n~~P~ 202 (283)
T 2pcq_A 168 ----LQEFRVY--TGHA--PTFLGALALGAEGGILAAANLAPR 202 (283)
T ss_dssp ----CSSCEEE--ECCG--GGHHHHHHTTCCEEECGGGGTCHH
T ss_pred ----CCCEEEE--ECcH--HHHHHHHHcCCCEEEeCHHHhCHH
Confidence 2344443 3332 234556689999999887766443
No 483
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=87.51 E-value=7.3 Score=36.50 Aligned_cols=134 Identities=11% Similarity=-0.040 Sum_probs=75.0
Q ss_pred HHHHHHcCcCEEEEeccC--CCh-------HHHHHHHHHHHHcCCc--EEEEcCC-------------------------
Q 015899 254 IYYARTKGADAVLLIAAV--LPD-------LDIRYMTKICKLLGLT--ALVEVHD------------------------- 297 (398)
Q Consensus 254 I~eAr~~GADaVLLiaai--L~~-------~~L~~Li~~a~~LGL~--~LVEVht------------------------- 297 (398)
|..|...||..|.+...- .++ +.|.++.++|...|+. ..+|-|+
T Consensus 114 i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~~~e~~~~~t~~~~~~~g~~~~~~~~~ 193 (303)
T 3l23_A 114 AADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHNMEFNRVATKEQQEKVKGNPFAAFMK 193 (303)
T ss_dssp HHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSGGGSEECCTTTC----------CCC
T ss_pred HHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEccCcceeeccccccccccccccccccccc
Confidence 667889999999874211 122 2366777788889999 9999875
Q ss_pred --HHHHHHHhccCCCcEEeeccc--cCcccccChhhHHHH-hhhhcccccccCCceEEE-ecCCCCHHHHHHHHHcCCCE
Q 015899 298 --EREMDRVLGIEGIELIGINNR--NLETFEVDNSNTKKL-LEGERGEIIRQKNIIVVG-ESGLFTPDDIAYVQEAGVKA 371 (398)
Q Consensus 298 --~eEl~rAl~l~Ga~iIGINnR--dL~tf~vDl~~t~~L-~~~i~~~~i~~~~v~vVA-ESGI~t~eD~~~l~~~Gada 371 (398)
.+.++..++.-+.+.+|++-- .......|+....+. .+.+.-=.+ ++...+. +|-|.=++-++.+.+.|+++
T Consensus 194 ~~~~~~~~l~~~~~~~~v~~~~D~~h~~~~g~d~~~~i~~~~~ri~~vH~--kD~~~~G~~G~id~~~i~~~L~~~gy~G 271 (303)
T 3l23_A 194 VGDQIYDLMLKDTDPSKVYFEMDVYWTVMGQNDPVEYMQKHPDRIKVLHI--KDRAVFGQSGMMNFEMIFKQMYANGIKD 271 (303)
T ss_dssp CSEEHHHHHHHHSCTTTEEEEEEHHHHHHTTCCHHHHHHHCTTTEEEEEE--CCSSSTTSSSCCCHHHHHHHHHHHTCCC
T ss_pred CchHHHHHHHHhCCchhEEEEEehHHHHHcCCCHHHHHHHhcCcEEEEEe--cCCcCCCCCCccCHHHHHHHHHHcCCCE
Confidence 235555544225566777611 111112344333222 111111011 2223344 66666677778899999999
Q ss_pred EEEcccccC--CCChHHHHHh
Q 015899 372 VLVGESIVK--QDDPGKGITG 390 (398)
Q Consensus 372 VLVGeaLmk--~~dp~~~i~~ 390 (398)
.+ =|.--. ..||...+++
T Consensus 272 ~i-vE~~~~~~~~~p~~~~~~ 291 (303)
T 3l23_A 272 YF-VELEQMPDGRTQFAGVKD 291 (303)
T ss_dssp EE-ECCCCCTTSCCHHHHHHH
T ss_pred EE-EEecCCccCCCHHHHHHH
Confidence 87 444322 2457766654
No 484
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=87.49 E-value=2 Score=42.16 Aligned_cols=69 Identities=14% Similarity=0.177 Sum_probs=58.3
Q ss_pred CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hHHHHHHHHHHHHcCCcEEEEc
Q 015899 226 SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEV 295 (398)
Q Consensus 226 s~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~~LVEV 295 (398)
+++.+..+|+. +++||...+-+.++.++.++...| +|.|.+...... -.+..++.+.|+..|+.+++-+
T Consensus 225 d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~ 295 (378)
T 2qdd_A 225 TLDQCAHVARR-VANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIED 295 (378)
T ss_dssp SHHHHHHHHTT-CCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred CHHHHHHHHHh-CCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 99999999986 899999999999999988887654 899999777664 4457788899999999988764
No 485
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=87.47 E-value=7.4 Score=32.73 Aligned_cols=100 Identities=16% Similarity=0.134 Sum_probs=64.9
Q ss_pred HHHHHH-HHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccC-hhhHHHHhhhhcccccccCCceEEEec
Q 015899 276 DIRYMT-KICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVD-NSNTKKLLEGERGEIIRQKNIIVVGES 353 (398)
Q Consensus 276 ~L~~Li-~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vD-l~~t~~L~~~i~~~~i~~~~v~vVAES 353 (398)
....++ ...+..|..+..++.|-+++...+.-..+++|=+- +.=-..| ++.+.++... .. -.++++|.-+
T Consensus 23 ~~r~~l~~~L~~~G~~~v~~a~~g~~al~~~~~~~~DlillD---~~MP~mdG~el~~~ir~~---~~--~~~ipvI~lT 94 (134)
T 3to5_A 23 TMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGDFDFVVTD---WNMPGMQGIDLLKNIRAD---EE--LKHLPVLMIT 94 (134)
T ss_dssp HHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHHCCSEEEEE---SCCSSSCHHHHHHHHHHS---TT--TTTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEEECCHHHHHHHHHhCCCCEEEEc---CCCCCCCHHHHHHHHHhC---CC--CCCCeEEEEE
Confidence 344444 44557899888888998888776664456766442 1111223 4444454332 11 1367899999
Q ss_pred CCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHH
Q 015899 354 GLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGI 388 (398)
Q Consensus 354 GI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i 388 (398)
+..+.++..++.++|++++| .|+-++....
T Consensus 95 a~~~~~~~~~~~~~Ga~~yl-----~KP~~~~~L~ 124 (134)
T 3to5_A 95 AEAKREQIIEAAQAGVNGYI-----VKPFTAATLK 124 (134)
T ss_dssp SSCCHHHHHHHHHTTCCEEE-----ESSCCHHHHH
T ss_pred CCCCHHHHHHHHHCCCCEEE-----ECCCCHHHHH
Confidence 99999999999999999875 5666665443
No 486
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=87.42 E-value=22 Score=34.41 Aligned_cols=137 Identities=13% Similarity=0.236 Sum_probs=83.6
Q ss_pred ccCCcCCCC-HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccC-------CC-hHHHHHHH---HHHH
Q 015899 218 TDEKYFKGS-FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV-------LP-DLDIRYMT---KICK 285 (398)
Q Consensus 218 Td~~~F~Gs-~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai-------L~-~~~L~~Li---~~a~ 285 (398)
|-+.|+.|+ +.+...+.+. ..+..+.|||.|-+...- .+ .++++.++ +..+
T Consensus 49 TPDSFsdgg~~~~~~~a~~~-----------------a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~ 111 (297)
T 1tx2_A 49 TPDSFSDGGSYNEVDAAVRH-----------------AKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVS 111 (297)
T ss_dssp CCCTTCSSCBHHHHHHHHHH-----------------HHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCccccCCccCCHHHHHHH-----------------HHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 555677766 5555555432 334456899999999632 22 45677676 4333
Q ss_pred H-cCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEE--ecCCCC-----
Q 015899 286 L-LGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVG--ESGLFT----- 357 (398)
Q Consensus 286 ~-LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVA--ESGI~t----- 357 (398)
+ .++.+.++..+.+-++.|+++ |+++| |.-+..+ .|.+ ..+++.. .++.+|. -.|...
T Consensus 112 ~~~~vpiSIDT~~~~V~~aAl~a-Ga~iI--Ndvsg~~--~d~~-m~~~aa~--------~g~~vVlmh~~G~p~y~d~v 177 (297)
T 1tx2_A 112 KEVKLPISIDTYKAEVAKQAIEA-GAHII--NDIWGAK--AEPK-IAEVAAH--------YDVPIILMHNRDNMNYRNLM 177 (297)
T ss_dssp HHSCSCEEEECSCHHHHHHHHHH-TCCEE--EETTTTS--SCTH-HHHHHHH--------HTCCEEEECCCSCCCCSSHH
T ss_pred hcCCceEEEeCCCHHHHHHHHHc-CCCEE--EECCCCC--CCHH-HHHHHHH--------hCCcEEEEeCCCCCCcchHH
Confidence 3 499999999999999999997 99997 5333322 2332 2344443 2333433 345433
Q ss_pred -------HHHHHHHHHcCCC--EEEEcccccCCCChH
Q 015899 358 -------PDDIAYVQEAGVK--AVLVGESIVKQDDPG 385 (398)
Q Consensus 358 -------~eD~~~l~~~Gad--aVLVGeaLmk~~dp~ 385 (398)
.+-++.+.++|+. -+++=-.+.-..+..
T Consensus 178 ~ev~~~l~~~i~~a~~~GI~~~~IilDPg~Gfgk~~~ 214 (297)
T 1tx2_A 178 ADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPE 214 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhcEEEeCCCCcCCCHH
Confidence 1235667788998 577655443355554
No 487
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=87.22 E-value=0.13 Score=47.73 Aligned_cols=74 Identities=14% Similarity=0.094 Sum_probs=51.5
Q ss_pred CCcEEEEeccCCcCCC------CHHHHHHHHhcCC-----CCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHHHH
Q 015899 210 GAACLSILTDEKYFKG------SFENLEAVRSAGV-----KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (398)
Q Consensus 210 GA~aISVLTd~~~F~G------s~edL~~Ir~a~v-----~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~ 278 (398)
|++.|-+.+=..-|+| .++.|+.+|+. + ++||.. ||.|++.++.+...+|||.+..+.++...++.+
T Consensus 134 ~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~-~~~~~~~~~I~v-~GGI~~~~~~~~~~aGad~vvvGSai~~a~d~~ 211 (230)
T 1tqj_A 134 VCDLILIMSVNPGFGGQSFIPEVLPKIRALRQM-CDERGLDPWIEV-DGGLKPNNTWQVLEAGANAIVAGSAVFNAPNYA 211 (230)
T ss_dssp GCSEEEEESSCC----CCCCGGGHHHHHHHHHH-HHHHTCCCEEEE-ESSCCTTTTHHHHHHTCCEEEESHHHHTSSCHH
T ss_pred cCCEEEEEEeccccCCccCcHHHHHHHHHHHHH-HHhcCCCCcEEE-ECCcCHHHHHHHHHcCCCEEEECHHHHCCCCHH
Confidence 6888876654444444 46788888875 5 788775 666777889999999999999999988644455
Q ss_pred HHHHHHH
Q 015899 279 YMTKICK 285 (398)
Q Consensus 279 ~Li~~a~ 285 (398)
+.++..+
T Consensus 212 ~~~~~l~ 218 (230)
T 1tqj_A 212 EAIAGVR 218 (230)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5444443
No 488
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=87.18 E-value=1.4 Score=43.12 Aligned_cols=119 Identities=10% Similarity=0.056 Sum_probs=85.4
Q ss_pred cHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCc
Q 015899 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP 241 (398)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lP 241 (398)
....++++.. ....+..+.- |-+.. .+ .++++.+++.|...| -+| +-..+++.+..+++. +.+|
T Consensus 171 ~~v~avr~a~---~~~~l~vDan------~~~~~-~~-~~~~~~l~~~~i~~i---EqP-~~~~d~~~~~~l~~~-~~ip 234 (369)
T 2zc8_A 171 EVLKAVREAF---PEATLTADAN------SAYSL-AN-LAQLKRLDELRLDYI---EQP-LAYDDLLDHAKLQRE-LSTP 234 (369)
T ss_dssp HHHHHHHHHC---TTSCEEEECT------TCCCG-GG-HHHHHGGGGGCCSCE---ECC-SCTTCSHHHHHHHHH-CSSC
T ss_pred HHHHHHHHHc---CCCeEEEecC------CCCCH-HH-HHHHHHHHhCCCcEE---ECC-CCcccHHHHHHHHhh-CCCC
Confidence 3456666543 2345666652 22332 34 778888888775543 344 455788999999987 8999
Q ss_pred EEeccccCCHHHHHHHHHcC-cCEEEEeccCCC-hHHHHHHHHHHHHcCCcEEEEcC
Q 015899 242 LLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEVH 296 (398)
Q Consensus 242 VL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~~LVEVh 296 (398)
|...+-+.+++++.++...| +|.|.+...... -.+..++.+.|+..|+.+++-..
T Consensus 235 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~ 291 (369)
T 2zc8_A 235 ICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWMGGM 291 (369)
T ss_dssp EEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCC
T ss_pred EEEcCccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEecCc
Confidence 99999999999999998777 899998776654 34578889999999999876543
No 489
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=87.18 E-value=3.9 Score=39.71 Aligned_cols=131 Identities=13% Similarity=0.091 Sum_probs=82.7
Q ss_pred CHHHHHHHHHcCcCEEEEeccC----CChHHHHHHHHHHHH---cCCcEEEEcCCH-------------HHHHHHhccCC
Q 015899 250 DAWQIYYARTKGADAVLLIAAV----LPDLDIRYMTKICKL---LGLTALVEVHDE-------------REMDRVLGIEG 309 (398)
Q Consensus 250 d~~QI~eAr~~GADaVLLiaai----L~~~~L~~Li~~a~~---LGL~~LVEVht~-------------eEl~rAl~l~G 309 (398)
+...+..|...|||.|=|...+ |++. ..+++.+++ +-+-+|+--+.- ++++.+.++ |
T Consensus 48 s~~~a~~A~~gGAdRIELc~~l~~GGlTPS--~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~-G 124 (287)
T 3iwp_A 48 SVESAVNAERGGADRIELCSGLSEGGTTPS--MGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLY-G 124 (287)
T ss_dssp SHHHHHHHHHHTCSEEEECBCGGGTCBCCC--HHHHHHHHTTCCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHT-T
T ss_pred CHHHHHHHHHhCCCEEEECCCCCCCCCCCC--HHHHHHHHHhcCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHc-C
Confidence 4456788889999999998664 3432 223333332 344446655554 678888887 9
Q ss_pred CcEE--eeccccCcccccChhhHHHHhhhhcccccccCCceEEEecCC---CCH-HHHHHHHHcCCCEEEEcccccCCCC
Q 015899 310 IELI--GINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGL---FTP-DDIAYVQEAGVKAVLVGESIVKQDD 383 (398)
Q Consensus 310 a~iI--GINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESGI---~t~-eD~~~l~~~GadaVLVGeaLmk~~d 383 (398)
++-| |+-+. +.++|.+.+.+|++.. .+..+..---+ .++ +-++.+.++|++.||-+-.--...+
T Consensus 125 AdGvVfG~L~~---dg~iD~~~~~~Li~~a-------~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~a~~ 194 (287)
T 3iwp_A 125 ADGLVFGALTE---DGHIDKELCMSLMAIC-------RPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSALE 194 (287)
T ss_dssp CSEEEECCBCT---TSCBCHHHHHHHHHHH-------TTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSSTTT
T ss_pred CCEEEEeeeCC---CCCcCHHHHHHHHHHc-------CCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCChHH
Confidence 9844 54333 3468999999998862 12333322222 233 4567788889999999777555556
Q ss_pred hHHHHHhhhc
Q 015899 384 PGKGITGLFG 393 (398)
Q Consensus 384 p~~~i~~L~~ 393 (398)
-...|++|+.
T Consensus 195 Gl~~Lk~Lv~ 204 (287)
T 3iwp_A 195 GLPLIKRLIE 204 (287)
T ss_dssp THHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 5666777654
No 490
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=87.10 E-value=8.6 Score=29.45 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=61.0
Q ss_pred HHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccC-hhhHHHHhhhhcccccccCCceEEEecCC
Q 015899 277 IRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVD-NSNTKKLLEGERGEIIRQKNIIVVGESGL 355 (398)
Q Consensus 277 L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vD-l~~t~~L~~~i~~~~i~~~~v~vVAESGI 355 (398)
...+.......|.++...+++.+++...+.-..+++|=+. .++.+ .| ++...++.+. ...+++|.-++-
T Consensus 15 ~~~l~~~l~~~g~~vv~~~~~~~~a~~~~~~~~~dlil~D-~~l~~--~~g~~~~~~l~~~-------~~~~~ii~~s~~ 84 (120)
T 1tmy_A 15 RMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMD-ITMPE--MNGIDAIKEIMKI-------DPNAKIIVCSAM 84 (120)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEE-CSCGG--GCHHHHHHHHHHH-------CTTCCEEEEECT
T ss_pred HHHHHHHHhhcCcEEEEEECCHHHHHHHHHhcCCCEEEEe-CCCCC--CcHHHHHHHHHhh-------CCCCeEEEEeCC
Confidence 3334444456899887788998888776654356766554 22211 12 2333344332 135677778888
Q ss_pred CCHHHHHHHHHcCCCEEEEcccccCCCChHHHH
Q 015899 356 FTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGI 388 (398)
Q Consensus 356 ~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i 388 (398)
.+.+....+.++|+++++. |+-++....
T Consensus 85 ~~~~~~~~~~~~g~~~~l~-----KP~~~~~l~ 112 (120)
T 1tmy_A 85 GQQAMVIEAIKAGAKDFIV-----KPFQPSRVV 112 (120)
T ss_dssp TCHHHHHHHHHTTCCEEEE-----SSCCHHHHH
T ss_pred CCHHHHHHHHHhCcceeEe-----CCCCHHHHH
Confidence 8999999999999999754 566655444
No 491
>1vfs_A Alanine racemase; TIM-barrel, greek-KEY motief, isomerase; HET: KCX DCS; 1.90A {Streptomyces lavendulae} SCOP: b.49.2.2 c.1.6.1 PDB: 1vfh_A* 1vft_A*
Probab=86.99 E-value=19 Score=35.21 Aligned_cols=165 Identities=14% Similarity=0.098 Sum_probs=99.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCCChHH
Q 015899 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD 276 (398)
Q Consensus 197 ~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~ 276 (398)
....++++.+.+.|+..+-| .+.+.+..+|+++.+.|++.=.. +.+.++..+...|. +. .+=+.++
T Consensus 44 hg~~~i~~~l~~~G~~~f~v--------as~~Ea~~~~~~G~~~~il~~~~-~~~~~~~~~~~~~i--~~---~vds~~~ 109 (386)
T 1vfs_A 44 HGAVPCARAAQEAGAAWLGT--------ATPEEALELRAAGIQGRIMCWLW-TPGGPWREAIETDI--DV---SVSGMWA 109 (386)
T ss_dssp TCHHHHHHHHHHHTCCEEEE--------SSHHHHHHHHHTTCCSEEEECCC-CTTCCHHHHHHTTC--EE---EECSHHH
T ss_pred CCHHHHHHHHHHCCCCEEEE--------eeHHHHHHHHhcCCCCCEEEECC-CCHHHHHHHHHcCC--EE---EECCHHH
Confidence 34668999998999999999 68889999998766667874333 34456777777553 22 3335667
Q ss_pred HHHHHHHHHHcC--CcEEEEcCC--------HHHH-------HHHhccCCCcEEeeccccCcccccC-------hhhHHH
Q 015899 277 IRYMTKICKLLG--LTALVEVHD--------EREM-------DRVLGIEGIELIGINNRNLETFEVD-------NSNTKK 332 (398)
Q Consensus 277 L~~Li~~a~~LG--L~~LVEVht--------~eEl-------~rAl~l~Ga~iIGINnRdL~tf~vD-------l~~t~~ 332 (398)
++.+-+.|...| +.++++|.+ .+|+ +++.++.+.++.|+-.---.....+ ++...+
T Consensus 110 l~~l~~~a~~~~~~~~V~l~vdtG~~R~G~~~~e~~~~~~~~~~i~~~~~l~l~Gl~tH~~~~~~~~~~~~~~~~~~f~~ 189 (386)
T 1vfs_A 110 LDEVRAAARAAGRTARIQLKADTGLGRNGCQPADWAELVGAAVAAQAEGTVQVTGVWSHFACADEPGHPSIRLQLDAFRD 189 (386)
T ss_dssp HHHHHHHHHHHTSCEEEEEEBCSSCCSSSBCHHHHHHHHHHHHHHHHTTSEEEEEEECCCSSTTSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEEEcCCCCCCCCCHhHHHHHHHHHHHHHhCCCceEEEEEecCCCCCCCCcHHHHHHHHHHHH
Confidence 888888877665 567888874 4553 3334445678889842211111112 222333
Q ss_pred HhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015899 333 LLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 381 (398)
Q Consensus 333 L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 381 (398)
+...++...+ ....++.|| -.++....+.+++-|=+|.+|+..
T Consensus 190 ~~~~l~~~g~---~~~~~~~g~---s~g~~~~~~~~~~~vR~G~~lyg~ 232 (386)
T 1vfs_A 190 MLAYAEKEGV---DPEVRHIAN---SPATLTLPETHFDLVRTGLAVYGV 232 (386)
T ss_dssp HHHHHHHTTC---CCSEEEEEC---HHHHHHCGGGCSSEEEECGGGGTC
T ss_pred HHHHHHhcCC---CCCeEEecC---CHHHHcCccccCCEEEeChhhhCC
Confidence 3333221111 223455444 223344456799999999999854
No 492
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=86.99 E-value=4.9 Score=39.22 Aligned_cols=129 Identities=14% Similarity=0.109 Sum_probs=81.2
Q ss_pred CCCHHHHHH-HHHHcCCcEEEEeccCCcCCCCH---HHHHHHHhc-----CC---CCcEEeccccCCHHHHHHHHHcCcC
Q 015899 196 DFDPVEIAR-SYEKGGAACLSILTDEKYFKGSF---ENLEAVRSA-----GV---KCPLLCKEFIVDAWQIYYARTKGAD 263 (398)
Q Consensus 196 ~~dp~~iA~-aY~~~GA~aISVLTd~~~F~Gs~---edL~~Ir~a-----~v---~lPVL~KDFIid~~QI~eAr~~GAD 263 (398)
..+-.++++ .+.+.|...|=+ .||.-+. +.++.+++. .. .+..++.- .-.+..|..+|+|
T Consensus 40 ~~~k~~i~~~~L~~~Gv~~IE~----g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~----~~~i~~a~~~g~~ 111 (337)
T 3ble_A 40 TSEKLNIAKFLLQKLNVDRVEI----ASARVSKGELETVQKIMEWAATEQLTERIEILGFVDG----NKTVDWIKDSGAK 111 (337)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEE----EETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESST----THHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEE----eCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccc----hhhHHHHHHCCCC
Confidence 346678899 999999999887 4554345 556666541 11 11123221 1268889999999
Q ss_pred EEEEeccCCCh--------------HHHHHHHHHHHHcCCcEEEEcCC--------HH----HHHHHhccCCCcEEeecc
Q 015899 264 AVLLIAAVLPD--------------LDIRYMTKICKLLGLTALVEVHD--------ER----EMDRVLGIEGIELIGINN 317 (398)
Q Consensus 264 aVLLiaaiL~~--------------~~L~~Li~~a~~LGL~~LVEVht--------~e----El~rAl~l~Ga~iIGINn 317 (398)
.|-+-.+.-+- +.+.+.++++++.|+.+-+-+.+ .+ -++++.++ |++.|.+..
T Consensus 112 ~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Ga~~i~l~D 190 (337)
T 3ble_A 112 VLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKE-HIERIFLPD 190 (337)
T ss_dssp EEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTS-CCSEEEEEC
T ss_pred EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHc-CCCEEEEec
Confidence 99886543211 35778888999999998777655 43 34555665 999888753
Q ss_pred ccCcccc-cChhhHHHHhhhh
Q 015899 318 RNLETFE-VDNSNTKKLLEGE 337 (398)
Q Consensus 318 RdL~tf~-vDl~~t~~L~~~i 337 (398)
. .. ..+....++++.+
T Consensus 191 T----~G~~~P~~v~~lv~~l 207 (337)
T 3ble_A 191 T----LGVLSPEETFQGVDSL 207 (337)
T ss_dssp T----TCCCCHHHHHHHHHHH
T ss_pred C----CCCcCHHHHHHHHHHH
Confidence 1 11 1345555555543
No 493
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=86.94 E-value=0.66 Score=41.99 Aligned_cols=100 Identities=11% Similarity=-0.024 Sum_probs=66.5
Q ss_pred HHHHHHHHcCcCEEEEeccCCChHHHHHHHH-HHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhH
Q 015899 252 WQIYYARTKGADAVLLIAAVLPDLDIRYMTK-ICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNT 330 (398)
Q Consensus 252 ~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~-~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t 330 (398)
.++.++...|+++|-|...-++.+++.++++ .++..|..+++. +..+.|..+ |++.|-++..++...
T Consensus 17 ~~~~~a~~~Gv~~v~lr~k~~~~~~~~~~i~~l~~~~~~~livn----d~~~~A~~~-gadgvhl~~~~~~~~------- 84 (210)
T 3ceu_A 17 KIITALFEEGLDILHLRKPETPAMYSERLLTLIPEKYHRRIVTH----EHFYLKEEF-NLMGIHLNARNPSEP------- 84 (210)
T ss_dssp HHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCGGGGGGEEES----SCTTHHHHT-TCSEEECCSSSCSCC-------
T ss_pred HHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHHhCCeEEEe----CCHHHHHHc-CCCEEEECccccccc-------
Confidence 3466678889999999876677666555553 344568777773 344667776 889887766554211
Q ss_pred HHHhhhhcccccccCCceEEEecCCCCHHHHHHHHHcCCCEEEEcccc
Q 015899 331 KKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 378 (398)
Q Consensus 331 ~~L~~~i~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 378 (398)
.. .+.+ ..-+++|++++..+. +|+|.+.+|--+
T Consensus 85 ----~~--------~~~~--ig~s~~t~~e~~~A~-~GaDyv~~g~vf 117 (210)
T 3ceu_A 85 ----HD--------YAGH--VSCSCHSVEEVKNRK-HFYDYVFMSPIY 117 (210)
T ss_dssp ----TT--------CCSE--EEEEECSHHHHHTTG-GGSSEEEECCCC
T ss_pred ----cc--------cCCE--EEEecCCHHHHHHHh-hCCCEEEECCcC
Confidence 00 1211 233468999998887 999999998654
No 494
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=86.85 E-value=1.5 Score=42.09 Aligned_cols=86 Identities=16% Similarity=0.304 Sum_probs=66.7
Q ss_pred hHHHHHHHHHHHHcCCcEEEEcCCHHHHHHHhccCCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEec
Q 015899 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGES 353 (398)
Q Consensus 274 ~~~L~~Li~~a~~LGL~~LVEVht~eEl~rAl~l~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAES 353 (398)
.+.|+.|.++++++||.++.|++|...++.+.++ ++++-|..++.+++. ...++.+ .+.+|+..-
T Consensus 72 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~--~d~~kIga~~~~n~~----ll~~~a~---------~~kPV~lk~ 136 (280)
T 2qkf_A 72 EEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEV--CDVIQLPAFLARQTD----LVVAMAK---------TGNVVNIKK 136 (280)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH--CSEEEECGGGTTBHH----HHHHHHH---------TCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhh--CCEEEECcccccCHH----HHHHHHc---------CCCcEEEEC
Confidence 4568999999999999999999999999999885 799999988887654 3333322 467899999
Q ss_pred CCC-CHHHHHHH----HHcCC-CEEEE
Q 015899 354 GLF-TPDDIAYV----QEAGV-KAVLV 374 (398)
Q Consensus 354 GI~-t~eD~~~l----~~~Ga-daVLV 374 (398)
|.. |++++... ...|. +.+|+
T Consensus 137 G~~~t~~e~~~A~~~i~~~Gn~~i~L~ 163 (280)
T 2qkf_A 137 PQFLSPSQMKNIVEKFHEAGNGKLILC 163 (280)
T ss_dssp CTTSCGGGHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 997 98887554 45686 44554
No 495
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=86.84 E-value=1.2 Score=41.55 Aligned_cols=74 Identities=11% Similarity=0.090 Sum_probs=55.9
Q ss_pred HHHHHHHHHHcC-CcEEEEeccCCcCCC------CHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCcCEEEEecc
Q 015899 199 PVEIARSYEKGG-AACLSILTDEKYFKG------SFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (398)
Q Consensus 199 p~~iA~aY~~~G-A~aISVLTd~~~F~G------s~edL~~Ir~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa 270 (398)
|.+..+.|...| ++.|-+.|=..-|+| .++.++.+|+. . +++|. =|+.|++..+.++..+|||.+..+.+
T Consensus 126 p~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~-~~~~~I~-VdGGI~~~ti~~~~~aGAd~~V~Gsa 203 (227)
T 1tqx_A 126 DVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKK-YKNLNIQ-VDGGLNIETTEISASHGANIIVAGTS 203 (227)
T ss_dssp CGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHH-CTTCEEE-EESSCCHHHHHHHHHHTCCEEEESHH
T ss_pred cHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHh-ccCCeEE-EECCCCHHHHHHHHHcCCCEEEEeHH
Confidence 345667777755 999988875666666 36778888875 4 55554 46678899999999999999999998
Q ss_pred CCCh
Q 015899 271 VLPD 274 (398)
Q Consensus 271 iL~~ 274 (398)
+...
T Consensus 204 If~~ 207 (227)
T 1tqx_A 204 IFNA 207 (227)
T ss_dssp HHTC
T ss_pred HhCC
Confidence 8753
No 496
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=86.83 E-value=1.9 Score=43.22 Aligned_cols=94 Identities=12% Similarity=0.186 Sum_probs=71.2
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCcCEEEEeccCC-Ch
Q 015899 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL-PD 274 (398)
Q Consensus 196 ~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL-~~ 274 (398)
...-+++.+.++++|+.-++|-.-. ...-+.|..||+. +++||.. |+=+++--..+|.++|+|.+=+.---+ ++
T Consensus 45 ~~atv~Qi~~l~~aG~diVRvavp~---~~~a~al~~I~~~-~~vPlva-DiHf~~~lal~a~e~G~dklRINPGNig~~ 119 (366)
T 3noy_A 45 VEATLNQIKRLYEAGCEIVRVAVPH---KEDVEALEEIVKK-SPMPVIA-DIHFAPSYAFLSMEKGVHGIRINPGNIGKE 119 (366)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCS---HHHHHHHHHHHHH-CSSCEEE-ECCSCHHHHHHHHHTTCSEEEECHHHHSCH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCCC---hHHHHHHHHHHhc-CCCCEEE-eCCCCHHHHHHHHHhCCCeEEECCcccCch
Confidence 3355677889999999999984321 1235678888887 8999984 544588888889999999977765544 45
Q ss_pred HHHHHHHHHHHHcCCcEEEE
Q 015899 275 LDIRYMTKICKLLGLTALVE 294 (398)
Q Consensus 275 ~~L~~Li~~a~~LGL~~LVE 294 (398)
+.++++++.|++.|..+-+-
T Consensus 120 ~~~~~vv~~ak~~~~piRIG 139 (366)
T 3noy_A 120 EIVREIVEEAKRRGVAVRIG 139 (366)
T ss_dssp HHHHHHHHHHHHHTCEEEEE
T ss_pred hHHHHHHHHHHHcCCCEEEe
Confidence 66899999999998877664
No 497
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=86.75 E-value=19 Score=33.08 Aligned_cols=136 Identities=10% Similarity=0.059 Sum_probs=87.3
Q ss_pred cHHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcE-EEEeccCCcCCCCHHHHHHHHhcCCCC
Q 015899 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAAC-LSILTDEKYFKGSFENLEAVRSAGVKC 240 (398)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~a-ISVLTd~~~F~Gs~edL~~Ir~a~v~l 240 (398)
.|.+.|.... .++..+..|+|..+. +. ........+++...+.|... +-+ .. -+.+.|..+|+...++
T Consensus 87 tL~evl~~~~--~~~~~l~iEiK~~~~--~~-~~~~~~~~v~~~l~~~~~~~~v~~----~S--F~~~~l~~~~~~~p~~ 155 (250)
T 3ks6_A 87 TLEELCALYV--DSHVNFRCEIKPGVD--GL-PYEGFVALVIAGLERHSMLERTTF----SS--FLLASMDELWKATTRP 155 (250)
T ss_dssp EHHHHHHHHT--TCSCEEEEEECCCTT--SC-CCTTHHHHHHHHHHHTTCGGGEEE----EE--SCHHHHHHHHHHCCSC
T ss_pred CHHHHHHHHh--ccCcEEEEEeCCCcc--cC-cchHHHHHHHHHHHhcCCCCCEEE----Ee--CCHHHHHHHHHHCCCC
Confidence 4555555432 135789999996431 11 11223456677777776421 111 01 3678888898754566
Q ss_pred cEEeccccCCH-------HH-HHHHHHcCcCEEEEeccCCChHHHHHHHHHHHHcCCcEEE-EcCCHHHHHHHhccCCCc
Q 015899 241 PLLCKEFIVDA-------WQ-IYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGIE 311 (398)
Q Consensus 241 PVL~KDFIid~-------~Q-I~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~~LV-EVht~eEl~rAl~l~Ga~ 311 (398)
|+- ++... .+ +..+...|++.+......++. ++++.++..|+.+.+ -|.+.+++.+.+++ |++
T Consensus 156 ~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~G~~V~~WTvn~~~~~~~l~~~-GVD 227 (250)
T 3ks6_A 156 RLW---LVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTADA----GLMAQVQAAGLDFGCWAAHTPSQITKALDL-GVK 227 (250)
T ss_dssp EEE---EECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCCH----HHHHHHHHTTCEEEEECCCSHHHHHHHHHH-TCS
T ss_pred cEE---EEecccccccchhHHHHHHHhcCCCEEecchhhCCH----HHHHHHHHCCCEEEEEeCCCHHHHHHHHHc-CCC
Confidence 652 22110 11 233577899999988777764 578889999999855 46789999999998 999
Q ss_pred EEeec
Q 015899 312 LIGIN 316 (398)
Q Consensus 312 iIGIN 316 (398)
-|-+|
T Consensus 228 gIiTD 232 (250)
T 3ks6_A 228 VFTTD 232 (250)
T ss_dssp EEEES
T ss_pred EEEcC
Confidence 88776
No 498
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=86.70 E-value=10 Score=30.00 Aligned_cols=108 Identities=11% Similarity=0.063 Sum_probs=65.8
Q ss_pred HHHHHHHHHH-cCCcEEEEcCCHHHHHHHhcc-CCCcEEeeccccCcccccChhhHHHHhhhhcccccccCCceEEEecC
Q 015899 277 IRYMTKICKL-LGLTALVEVHDEREMDRVLGI-EGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESG 354 (398)
Q Consensus 277 L~~Li~~a~~-LGL~~LVEVht~eEl~rAl~l-~Ga~iIGINnRdL~tf~vDl~~t~~L~~~i~~~~i~~~~v~vVAESG 354 (398)
...+...... .|.++. .++|.+++...+.- ..+++|=+.- ++.. + ....+++..++.... ..++++|.-++
T Consensus 17 ~~~l~~~L~~~~~~~v~-~~~~~~~a~~~l~~~~~~dlvi~D~-~l~~---~-~~g~~~~~~l~~~~~-~~~~~ii~ls~ 89 (140)
T 3lua_A 17 REKTKIIFDNIGEYDFI-EVENLKKFYSIFKDLDSITLIIMDI-AFPV---E-KEGLEVLSAIRNNSR-TANTPVIIATK 89 (140)
T ss_dssp HHHHHHHHHHHCCCEEE-EECSHHHHHTTTTTCCCCSEEEECS-CSSS---H-HHHHHHHHHHHHSGG-GTTCCEEEEES
T ss_pred HHHHHHHHHhccCccEE-EECCHHHHHHHHhcCCCCcEEEEeC-CCCC---C-CcHHHHHHHHHhCcc-cCCCCEEEEeC
Confidence 3444444556 799766 88999999887764 4567766542 2210 1 112333333222000 13578888899
Q ss_pred CCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015899 355 LFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 393 (398)
Q Consensus 355 I~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 393 (398)
-.+.+.+.++.++|++++|.-- +.......+++.++.
T Consensus 90 ~~~~~~~~~~~~~g~~~~l~KP--~~~~~l~~~i~~~~~ 126 (140)
T 3lua_A 90 SDNPGYRHAALKFKVSDYILKP--YPTKRLENSVRSVLK 126 (140)
T ss_dssp CCCHHHHHHHHHSCCSEEEESS--CCTTHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHHHH
Confidence 9999999999999999986532 233445555555554
No 499
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=86.59 E-value=2.6 Score=39.15 Aligned_cols=114 Identities=18% Similarity=0.132 Sum_probs=74.8
Q ss_pred HHHHHHHHcCCcEEEEeccCCcC-CCCH----HHHHHHHhcCC---CCcEEeccccCCHHHHHHH----HHcCcCEEEEe
Q 015899 201 EIARSYEKGGAACLSILTDEKYF-KGSF----ENLEAVRSAGV---KCPLLCKEFIVDAWQIYYA----RTKGADAVLLI 268 (398)
Q Consensus 201 ~iA~aY~~~GA~aISVLTd~~~F-~Gs~----edL~~Ir~a~v---~lPVL~KDFIid~~QI~eA----r~~GADaVLLi 268 (398)
.-++...+.||++|.+...-+++ .|.. ++|..++++ + .+||+-----.++.+|..| .++|||.|=--
T Consensus 75 ~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a-~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTs 153 (220)
T 1ub3_A 75 LEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREA-VPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTS 153 (220)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHH-STTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHH-HcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 33566678899999998876655 3444 477777775 3 3554422222466666644 57899998875
Q ss_pred ccCC----ChHHHHHHHHHHH-HcCCcEEEEcCCHHHHHHHhccCCCcEEeec
Q 015899 269 AAVL----PDLDIRYMTKICK-LLGLTALVEVHDEREMDRVLGIEGIELIGIN 316 (398)
Q Consensus 269 aaiL----~~~~L~~Li~~a~-~LGL~~LVEVht~eEl~rAl~l~Ga~iIGIN 316 (398)
.-.- +.++.+.|.+... ..++-+-=-++|.+++...+++ |++-||+.
T Consensus 154 TGf~~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~a-Ga~RiG~S 205 (220)
T 1ub3_A 154 TGFGPRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKA-GASRLGTS 205 (220)
T ss_dssp CSSSSCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHT-TCSEEEET
T ss_pred CCCCCCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHC-CCcccchh
Confidence 4232 4456676665542 2344334446899999999997 99999986
No 500
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=86.57 E-value=1.7 Score=43.48 Aligned_cols=116 Identities=10% Similarity=0.036 Sum_probs=83.0
Q ss_pred HHHHHHhhhhcCCCceEEEEeccCCCCCCCCCCCCCHHHHHHHHHHcCCcEEEEeccCCcCCCCHHHHHHHHhcCCCCcE
Q 015899 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (398)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~aY~~~GA~aISVLTd~~~F~Gs~edL~~Ir~a~v~lPV 242 (398)
...++++.. .....|..+. ..| +. ..+..++++.+++.|...|- +|. .+++.+..+|+. +++||
T Consensus 202 ~v~avR~av--G~d~~l~vDa-----N~~-~~-~~~A~~~~~~L~~~~i~~iE---~P~---~d~~~~~~l~~~-~~iPI 265 (409)
T 3go2_A 202 HLEALRDGA--GPDVEILLDL-----NFN-AK-PEGYLKILRELADFDLFWVE---IDS---YSPQGLAYVRNH-SPHPI 265 (409)
T ss_dssp HHHHHHHHH--CTTSEEEEEC-----TTC-SC-HHHHHHHHHHTTTSCCSEEE---CCC---SCHHHHHHHHHT-CSSCE
T ss_pred HHHHHHHHh--CCCCEEEEEC-----CCC-CC-HHHHHHHHHHHhhcCCeEEE---eCc---CCHHHHHHHHhh-CCCCE
Confidence 345566543 1245677764 112 11 12345577888888877766 453 389999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-cCEEEEeccCCCh-HHHHHHHHHHHHcCCcEEEEcCC
Q 015899 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHD 297 (398)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~~LVEVht 297 (398)
...+-+.++++..++...| +|.|.+.... .. .+...+...|+..|+.+++ |.
T Consensus 266 a~dE~~~~~~~~~~~i~~~~~d~v~~k~~~-GGit~~~~ia~~A~~~gi~~~~--h~ 319 (409)
T 3go2_A 266 SSCETLFGIREFKPFFDANAVDVAIVDTIW-NGVWQSMKIAAFADAHDINVAP--HN 319 (409)
T ss_dssp EECTTCCHHHHHHHHHHTTCCSEEEECHHH-HCHHHHHHHHHHHHHTTCEEEE--CC
T ss_pred EeCCCcCCHHHHHHHHHhCCCCEEEeCCCC-CCHHHHHHHHHHHHHcCCEEee--cC
Confidence 9999999999999998776 7999887765 43 4577888899999999986 65
Done!