BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015901
(398 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P7N4|CC037_XENTR UPF0361 protein C3orf37 homolog OS=Xenopus tropicalis
GN=TGas027m07.1 PE=2 SV=1
Length = 335
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 142/272 (52%), Gaps = 34/272 (12%)
Query: 1 MCGRARCTLRADDLPRAC-------HRTGSPARTLNMDRYRPSYNVAPGWNLPVV----- 48
MCGR CTL DD+ +AC R R + D+Y+PSYN +P N PV+
Sbjct: 1 MCGRTACTLAPDDVRKACTYRDKQGGRKWPNWRDGDSDKYQPSYNKSPQSNSPVLLSLKH 60
Query: 49 -RRDDDGEGFVLHCMKWGLIPS-FTKKNEKPDFYKMFNARSESVTEKASFRRLLPKS-RC 105
++D D VL M+WGLIPS F + + YK N RS+++TEKA ++ L K RC
Sbjct: 61 FQKDADSSERVLAAMRWGLIPSWFNEPDPSKMQYKTNNCRSDTMTEKALYKASLFKGKRC 120
Query: 106 LAAVEGFYEWKKDGSKKQPYYVHF-----------------KDGRPLVFAALYDTWQS-S 147
+ +GFYEW++ S+KQPYY++F R L A L+D W+ +
Sbjct: 121 VVLADGFYEWQRQNSEKQPYYIYFPQIKAEKSPAEQDITDWNGQRLLTMAGLFDCWEPPN 180
Query: 148 EGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDL 207
GE LY++T++T SS + W+HDRMP IL E+ WL+ D + + ++
Sbjct: 181 GGETLYSYTVITVDSSKTMNWIHDRMPAILDGDEAVRKWLDFGEVPTKDALKLIHPIENI 240
Query: 208 VWYPVTPAMGKLSFDGPECIKEIPLKTEGKNP 239
++PV+ + + PEC+ I L T+ K P
Sbjct: 241 TYHPVSTVVNNSRNNTPECMAAIIL-TQKKGP 271
>sp|Q6IND6|CC037_XENLA UPF0361 protein C3orf37 homolog OS=Xenopus laevis PE=2 SV=1
Length = 336
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 141/272 (51%), Gaps = 34/272 (12%)
Query: 1 MCGRARCTLRADDLPRACH------RTGSPA-RTLNMDRYRPSYNVAPGWNLPVV----- 48
MCGR CTL DD+ +AC R P R + D+Y+PSYN +P N PV+
Sbjct: 1 MCGRTACTLAPDDVSKACSYQDKQGRQKCPKWRDGDTDKYQPSYNKSPQSNNPVLLSLKH 60
Query: 49 -RRDDDGEGFVLHCMKWGLIPS-FTKKNEKPDFYKMFNARSESVTEKASFRRLLPKSR-C 105
++D D VL M+WGLIPS F + + YK N RS+++TEKA ++ L K R C
Sbjct: 61 FQKDADSSERVLAAMRWGLIPSWFNELDPSKMQYKTNNCRSDTITEKALYKAPLFKGRRC 120
Query: 106 LAAVEGFYEWKKDGSKKQPYYVHF-----------------KDGRPLVFAALYDTWQS-S 147
+ +GFYEWK+ +KQPYY++F R L A L+D W+ S
Sbjct: 121 VVLADGFYEWKRQDGEKQPYYIYFPQIKSEKFPEEQDMMDWNGQRLLTMAGLFDCWEPPS 180
Query: 148 EGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDL 207
GE LY++T++T SS + +HDRMP IL E+ WL+ S D + + ++
Sbjct: 181 GGEPLYSYTVITVDSSKTMNCIHDRMPAILDGDEAIRKWLDFGEVSTQDALKLIHPIENI 240
Query: 208 VWYPVTPAMGKLSFDGPECIKEIPLKTEGKNP 239
++PV+ + + ECI + L T+ K P
Sbjct: 241 TYHPVSTVVNNSRNNSTECIAAVIL-TQKKGP 271
>sp|Q04471|YM04_YEAST Uncharacterized protein YMR114C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YMR114C PE=1 SV=1
Length = 368
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 181/379 (47%), Gaps = 59/379 (15%)
Query: 1 MCGRARCTLRADDLPRACHRTGSPART----------------------LNMDRYRPSYN 38
MCGR + DLP+ P T ++ D ++ SYN
Sbjct: 1 MCGRFALAYDSGDLPQLLRDWNLPVNTPKDASSNSQHPHDEEDTKDQPTVSKDIFKASYN 60
Query: 39 VAPGWNLPVVRRDDDGEGFVLHCMKWGLIPSFTKKNEKPDFYKMFNARSESVTEKASFRR 98
++P N V R D + M+WGL+P +TK + Y+ FNAR E++ E + R
Sbjct: 61 ISPT-NYSAVYRPDTK---AIQFMRWGLVPFWTKDVSQFKTYRTFNARLENLQESKMWMR 116
Query: 99 LLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTIL 158
K RC + G++EWK G KK PY++ +DGR + A +YD E + LYTFTI+
Sbjct: 117 PCEKKRCAVLMSGYFEWKTVGKKKTPYFISRRDGRLMFVAGMYDY---VEKDDLYTFTII 173
Query: 159 TTSSSAALQWLHDRMPVILG-DKESSDAWLNGS----SSSKYDTILKP-YEESDLVWYPV 212
T L+WLH+RMP +L ES DAW++ S+ + +LKP Y+ES L +Y V
Sbjct: 174 TAQGPRELEWLHERMPCVLEPGTESWDAWMDVDKTTWSTEELVKLLKPDYDESKLQFYQV 233
Query: 213 TPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFDE-SVKTNL 271
T +GK + G IK PL E S+ F K K+E + D + D VK +
Sbjct: 234 TDDVGKTTNTGERLIK--PLLKED----SDMFSVKREKEEALLENDNEQGIDNRGVKGD- 286
Query: 272 PKRMKGEPI----KEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQ----S 323
K +KGE + K +K GL++ + +T LP +E D ++ + S
Sbjct: 287 -KSLKGEDVFNQKKSLKRNSYDGLKKN---EEQEETTLP----EEGSIGDRVKREEANLS 338
Query: 324 SVEKGDPDTKSVASVLSDE 342
+G+ + +++ ++L ++
Sbjct: 339 PKREGNREKRNIVNMLGNQ 357
>sp|Q5ZJT1|CC037_CHICK UPF0361 protein C3orf37 homolog OS=Gallus gallus GN=RCJMB04_15p13
PE=2 SV=1
Length = 336
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 140/266 (52%), Gaps = 36/266 (13%)
Query: 1 MCGRARCTLRADDLPRACHRTGSPART-----LNMDRYRPSYNVAPGWNLPV------VR 49
MCGR C+L A L RAC R L RYRPSYN P + PV V+
Sbjct: 1 MCGRTACSLGAARLRRACAYRDRQGRRQQPEWLREGRYRPSYNKGPQSSGPVLLSRKHVQ 60
Query: 50 RDDDGEGFVLHCMKWGLIPSFTKKNEKPDF-YKMFNARSESVTEKASFRR-LLPKSRCLA 107
+D D VL M+WGL+PS+ K+++ +K N RS+++ K+S++ LL RC+
Sbjct: 61 QDADSSERVLMDMRWGLVPSWFKEDDPSKMQFKTSNCRSDTMLSKSSYKGPLLKGKRCVV 120
Query: 108 AVEGFYEWKKDGSKKQPYYVHF------------------KDGRPLVFAALYDTWQSSE- 148
+GFYEW++ G KQPY+++F + R L A ++D W+ +
Sbjct: 121 LADGFYEWQQRGGGKQPYFIYFPQNKKHPAEEEEDSDEEWRGWRLLTMAGIFDCWEPPKG 180
Query: 149 GEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDT--ILKPYEESD 206
GE LYT+TI+T +S + ++H RMP IL E+ + WL+ + + +++P E +
Sbjct: 181 GEPLYTYTIITVDASEDVSFIHHRMPAILDGDEAIEKWLDFAEVPTREAMKLIRPAE--N 238
Query: 207 LVWYPVTPAMGKLSFDGPECIKEIPL 232
+ ++PV+ + + D PEC+ I L
Sbjct: 239 IAFHPVSTFVNSVRNDTPECLVPIEL 264
>sp|O64131|YOQW_BPSPB UPF0361 protein yoqW OS=Bacillus phage SPbeta GN=yoqW PE=3 SV=1
Length = 224
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 125/237 (52%), Gaps = 24/237 (10%)
Query: 1 MCGRARCTLRADDLPRACHRTGSPARTLNMDR------YRPSYNVAPGWNLPVVRRDDDG 54
MCGR DD+ N+D+ Y PSYNVAP N+ + +DG
Sbjct: 1 MCGRFTLFSEFDDI----------IEQFNIDQFLPEGEYHPSYNVAPSQNILTII--NDG 48
Query: 55 EGFVLHCMKWGLIPSFTKKNEKPDFYKMFNARSESVTEKASFRRLLPKSRCLAAVEGFYE 114
L ++WGLIP + K +EK YKM NAR+E+++EK SFR+ L RC+ + FYE
Sbjct: 49 SNNRLGKLRWGLIPPWAK-DEKIG-YKMINARAETLSEKPSFRKPLVSKRCIIPADSFYE 106
Query: 115 WKK-DGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRM 173
WK+ D K P + K FA LY+ W + EG LYT TI+TT + ++ +HDRM
Sbjct: 107 WKRLDPKTKIPMRIKLKSSNLFAFAGLYEKWNTPEGNPLYTCTIITTKPNELMEDIHDRM 166
Query: 174 PVILGDKESSDAWLN--GSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIK 228
PVIL D E+ WLN + ++L+PY+ D+ Y V+ + + PE I+
Sbjct: 167 PVILTD-ENEKEWLNPKNTDPDYLQSLLQPYDADDMEAYQVSSLVNSPKNNSPELIE 222
>sp|O31916|YOQW_BACSU UPF0361 protein YoqW OS=Bacillus subtilis (strain 168) GN=yoqW PE=3
SV=1
Length = 224
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 125/237 (52%), Gaps = 24/237 (10%)
Query: 1 MCGRARCTLRADDLPRACHRTGSPARTLNMDR------YRPSYNVAPGWNLPVVRRDDDG 54
MCGR DD+ N+D+ Y PSYNVAP N+ + +DG
Sbjct: 1 MCGRFTLFSEFDDI----------IEQFNIDQFLPEGEYHPSYNVAPSQNILTII--NDG 48
Query: 55 EGFVLHCMKWGLIPSFTKKNEKPDFYKMFNARSESVTEKASFRRLLPKSRCLAAVEGFYE 114
L ++WGLIP + K +EK YKM NAR+E+++EK SFR+ L RC+ + FYE
Sbjct: 49 SNNRLGKLRWGLIPPWAK-DEKIG-YKMINARAETLSEKPSFRKPLVSKRCIIPADSFYE 106
Query: 115 WKK-DGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRM 173
WK+ D K P + K FA LY+ W + EG LYT TI+TT + ++ +HDRM
Sbjct: 107 WKRLDPKTKIPMRIKLKSSNLFAFAGLYEKWNTPEGNPLYTCTIITTKPNELMEDIHDRM 166
Query: 174 PVILGDKESSDAWLN--GSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIK 228
PVIL D E+ WLN + ++L+PY+ D+ Y V+ + + PE I+
Sbjct: 167 PVILTD-ENEKEWLNPKNTDPDYLQSLLQPYDADDMEAYQVSSLVNSPKNNSPELIE 222
>sp|O34915|YOBE_BACSU UPF0361 protein YobE OS=Bacillus subtilis (strain 168) GN=yobE PE=3
SV=1
Length = 219
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 1 MCGRARCTLRADDLPRACHRTGSPARTLNMDR------YRPSYNVAPGWNLPVVRRDDDG 54
MCG+ DD+ N+D+ Y PSYNVAP N+ + +DG
Sbjct: 1 MCGKFTLFSEFDDI----------IEQFNIDQFLPEGEYHPSYNVAPSQNILTII--NDG 48
Query: 55 EGFVLHCMKWGLIPSFTKKNEKPDFYKMFNARSESVTEKASFRRLLPKSRCLAAVEGFYE 114
L ++WGLIP K+EK YKM NAR+E++ EK SFR+ L RC+ + FYE
Sbjct: 49 SNNRLGKLRWGLIPP-CAKDEKIG-YKMINARAETLAEKPSFRKPLGSKRCIIPADSFYE 106
Query: 115 WKK-DGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLHDRM 173
WK+ D K P + K FA LY+ W + EG +LYT TI+T S ++ +HDRM
Sbjct: 107 WKRLDPKTKIPMRIKLKSSNLFAFAGLYEKWNTLEGNLLYTCTIITIKPSELMEDIHDRM 166
Query: 174 PVILGDKESSDAWLN--GSSSSKYDTILKPYEESDLVWYPVT 213
PVIL D E+ WLN + ++L PY+ D+ Y V+
Sbjct: 167 PVILTD-ENKKEWLNPKNTDPDYLQSLLLPYDADDMEAYQVS 207
>sp|Q5XIJ1|CC037_RAT UPF0361 protein C3orf37 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 353
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 133/266 (50%), Gaps = 39/266 (14%)
Query: 1 MCGRARCTLRADDLPRACHRTGSPARTL-----NMDRYRPSYNVAPGWNLPVV------R 49
MCGR C L D L RAC R + D+Y PSYN +P + PV+
Sbjct: 1 MCGRTSCHLPRDALTRACAYLDRQGRRQLPQWRDPDKYCPSYNKSPQSSSPVLLSRLHFE 60
Query: 50 RDDDGEGFVLHCMKWGLIPSFTKKNEKPDF-YKMFNARSESVTEKASFRRLLPKSR-CLA 107
+D D ++ M+WGL+PS+ K+++ + N RS+++ EK SF+ L K R C+
Sbjct: 61 KDADSSDRIIFPMRWGLVPSWFKESDPSKLQFNTSNCRSDTIMEKQSFKAPLGKGRRCVV 120
Query: 108 AVEGFYEWKK--DGSKKQPYYVHF------KDG------------------RPLVFAALY 141
+GFYEW++ +++QPY+++F K G R L A ++
Sbjct: 121 LADGFYEWQRCQGTNQRQPYFIYFPQSKTEKSGENSGSDSLNNKEEVWDNWRLLTMAGIF 180
Query: 142 DTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKP 201
D W+ +GE LY+++I+T S L +H RMP IL +E+ WL+ S + +
Sbjct: 181 DCWEPPKGERLYSYSIITVDSCRGLSDIHSRMPAILDGEEAVSKWLDFGEVSTQEALKLI 240
Query: 202 YEESDLVWYPVTPAMGKLSFDGPECI 227
+ ++ ++PV+P + + PEC+
Sbjct: 241 HPIDNITFHPVSPVVNNSRNNTPECL 266
>sp|O34906|YOAM_BACSU UPF0361 protein YoaM OS=Bacillus subtilis (strain 168) GN=yoaM PE=3
SV=1
Length = 227
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 107/184 (58%), Gaps = 8/184 (4%)
Query: 33 YRPSYNVAPGWNLPVVRRDDDGEGFVLHCMKWGLIPSFTKKNEKPDFYKMFNARSESVTE 92
Y+PSYNVAP N+ + +DG L ++WGLIP + K +EK YKM NAR+E++TE
Sbjct: 29 YQPSYNVAPSQNILAII--NDGSNNRLGKLRWGLIPPWAK-DEKIG-YKMINARAETITE 84
Query: 93 KASFRRLLPKSRCLAAVEGFYEWKK-DGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEI 151
K +FRR L RC+ + FYEWK+ D K P + K FA LY+ W + +G
Sbjct: 85 KPAFRRPLVSKRCIIPADSFYEWKRLDSKTKIPMRIKLKSSALFAFAGLYEKWSTHQGYP 144
Query: 152 LYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLN--GSSSSKYDTILKPYEESDLVW 209
LYT TI+TT + ++ +HDRMPVIL + WLN +S ++L PY+ D+
Sbjct: 145 LYTCTIITTEPNEFMKDIHDRMPVILAHDHEKE-WLNPKNTSPDYLQSLLLPYDADDMEA 203
Query: 210 YPVT 213
Y V+
Sbjct: 204 YQVS 207
>sp|Q8R1M0|CC037_MOUSE UPF0361 protein C3orf37 homolog OS=Mus musculus PE=2 SV=1
Length = 353
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 39/266 (14%)
Query: 1 MCGRARCTLRADDLPRACHRTGSPARTL-----NMDRYRPSYNVAPGWNLPVV------R 49
MCGR C L + L RAC R + D+Y PSYN +P + PV+
Sbjct: 1 MCGRTSCHLPREVLTRACAYQDRQGRRRLPQWRDPDKYCPSYNKSPQSSSPVLLSRLHFE 60
Query: 50 RDDDGEGFVLHCMKWGLIPSFTKKNEKPDF-YKMFNARSESVTEKASFRRLLPKSR-CLA 107
+D D ++ M+WGL+PS+ K+++ + N RS+++ EK SF+ L K R C+
Sbjct: 61 KDADSSDRIIIPMRWGLVPSWFKESDPSKLQFNTTNCRSDTIMEKQSFKVPLGKGRRCVV 120
Query: 108 AVEGFYEWKK--DGSKKQPYYVHF------KDG------------------RPLVFAALY 141
+GFYEW++ +++QPY+++F K G R L A ++
Sbjct: 121 LADGFYEWQRCQGTNQRQPYFIYFPQIKTEKSGGNDASDSSDNKEKVWDNWRLLTMAGIF 180
Query: 142 DTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKP 201
D W++ GE LY+++I+T S L +H RMP IL +E+ WL+ + + +
Sbjct: 181 DCWEAPGGECLYSYSIITVDSCRGLSDIHSRMPAILDGEEAVSKWLDFGEVATQEALKLI 240
Query: 202 YEESDLVWYPVTPAMGKLSFDGPECI 227
+ ++ ++PV+P + + PEC+
Sbjct: 241 HPIDNITFHPVSPVVNNSRNNTPECL 266
>sp|Q96FZ2|CC037_HUMAN UPF0361 protein C3orf37 OS=Homo sapiens GN=C3orf37 PE=1 SV=1
Length = 354
Score = 128 bits (322), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 135/272 (49%), Gaps = 40/272 (14%)
Query: 1 MCGRARCTLRADDLPRACH---RTGSP--ARTLNMDRYRPSYNVAPGWNLPVV------R 49
MCGR C L D L RAC R G + D+Y PSYN +P N PV+
Sbjct: 1 MCGRTSCHLPRDVLTRACAYQDRRGQQRLPEWRDPDKYCPSYNKSPQSNSPVLLSRLHFE 60
Query: 50 RDDDGEGFVLHCMKWGLIPSFTKKNEKPDF-YKMFNARSESVTEKASFRRLLPKSR-CLA 107
+D D ++ M+WGL+PS+ K+++ + N RS++V EK SF+ L K R C+
Sbjct: 61 KDADSSERIIAPMRWGLVPSWFKESDPSKLQFNTTNCRSDTVMEKRSFKVPLGKGRRCVV 120
Query: 108 AVEGFYEWKK--DGSKKQPYYVHF------KDG------------------RPLVFAALY 141
+GFYEW++ +++QPY+++F K G R L A ++
Sbjct: 121 LADGFYEWQRCQGTNQRQPYFIYFPQIKTEKSGSIGAADSPENWEKVWDNWRLLTMAGIF 180
Query: 142 DTWQSSEG-EILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILK 200
D W+ EG ++LY++TI+T S L +H RMP IL +E+ WL+ S + +
Sbjct: 181 DCWEPPEGGDVLYSYTIITVDSCKGLSDIHHRMPAILDGEEAVSKWLDFGEVSTQEALKL 240
Query: 201 PYEESDLVWYPVTPAMGKLSFDGPECIKEIPL 232
+ ++ ++ V+ + + PEC+ + L
Sbjct: 241 IHPTENITFHAVSSVVNNSRNNTPECLAPVDL 272
>sp|Q5NVR0|CC037_PONAB UPF0361 protein C3orf37 homolog OS=Pongo abelii PE=2 SV=1
Length = 354
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 150/310 (48%), Gaps = 46/310 (14%)
Query: 1 MCGRARCTLRADDLPRACH---RTGSP--ARTLNMDRYRPSYNVAPGWNLPVVR------ 49
MCGR C L D L RAC R G + D+Y PSYN +P N PV+
Sbjct: 1 MCGRTSCHLPRDVLTRACAYQDRRGQQRLPEWRDPDKYCPSYNKSPQSNSPVLLSRLHFV 60
Query: 50 RDDDGEGFVLHCMKWGLIPSFTKKNEKPDF-YKMFNARSESVTEKASFRRLLPKSR-CLA 107
+D D ++ M+WGL+PS+ K+++ + N R++++ EK SF+ L K R C+
Sbjct: 61 KDADSSERIIAPMRWGLVPSWFKESDPSKLQFNTTNCRNDTIMEKRSFKVPLGKGRRCVV 120
Query: 108 AVEGFYEWKK--DGSKKQPYYVHF------KDG------------------RPLVFAALY 141
+GFYEW++ +++QPY+++F K G R L A ++
Sbjct: 121 LADGFYEWQRCQGTNQRQPYFIYFPQIKTEKSGSIGAADSPENWGKVWDNWRLLTMAGIF 180
Query: 142 DTWQSSEG-EILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILK 200
D W+ EG ++LY++TI+T S L +H RMP IL +E+ WL+ S + +
Sbjct: 181 DCWEPPEGGDVLYSYTIITVDSCKGLSDIHHRMPAILDGEEAVSKWLDFGKVSTQEALKL 240
Query: 201 PYEESDLVWYPVTPAMGKLSFDGPECIKEI------PLKTEGKNPISNFFLKKEIKKEQE 254
+ ++ ++ V+ + + PEC+ + LK G + +L + K+++
Sbjct: 241 IHPTENITFHAVSSVVNNSRNNTPECLAPVDLVVRKELKASGSSQRMLQWLATKSPKKED 300
Query: 255 SKMDEKSSFD 264
SK +K D
Sbjct: 301 SKTPQKEESD 310
>sp|P76318|YEDK_ECOLI Uncharacterized protein YedK OS=Escherichia coli (strain K12)
GN=yedK PE=1 SV=2
Length = 222
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 37 YNVAPGWNLPVVRRDDDGEGFVLHCMKWGLIPSFTKKNEKPDFYKMFNARSESVTEKASF 96
YNVAPG + ++ D E L + WG P + K + NAR E+ F
Sbjct: 36 YNVAPGTKVLLLSERD--EHLHLDPVFWGYAPGWWDKP------PLINARVETAATSRMF 87
Query: 97 RRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFT 156
+ L R + +G++EWKK+G KKQP++++ DG+P+ AA+ T G+ F
Sbjct: 88 KPLWQHGRAICFADGWFEWKKEGDKKQPFFIYRADGQPIFMAAIGST-PFERGDEAEGFL 146
Query: 157 ILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKP---YEESDLVWYPVT 213
I+T ++ L +HDR P++L E++ W+ S K + + + W+PV+
Sbjct: 147 IVTAAADQGLVDIHDRRPLVL-SPEAAREWMRQEISGKEASEIAASGCVPANQFSWHPVS 205
Query: 214 PAMGKLSFDGPECIKEI 230
A+G + G E I+ +
Sbjct: 206 RAVGNVKNQGAELIQPV 222
>sp|B8F3E3|SYM_HAEPS Methionine--tRNA ligase OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=metG PE=3 SV=1
Length = 684
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 165 ALQWLHDRMPVILGDKESSDAWLNGSSSSKYDT--ILKPYEESDLVWYPVTPAMGK---- 218
A +++ D+ P ++ +E +DA L S + +L Y + PV P + +
Sbjct: 450 ANKYIDDKAPWVIAKEEGTDAELQAVCSMGLELFRVLMSYLK------PVLPKLAERAEA 503
Query: 219 -----LSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDE-KSSFDESVKTNLP 272
L +D PL P + F + E KK+ ++ ++E K+ F ESVK
Sbjct: 504 FLQTELRWDNIGS----PLFAHSIAPFKSLFSRLE-KKQIDAVIEETKALFAESVKAETA 558
Query: 273 KRMKGEPIKEIKEEPVSGLEEKYSFDTTAQTNL--PKSVKDEAVTADDIRTQSSVEKGDP 330
K+ K E K EP++ + + D A+ +L K +K EAV D + ++ GD
Sbjct: 559 KKGKEMTACETKVEPIA---PEITIDDFAKLDLRVAKVLKCEAVPKSDKLLRFELDLGDH 615
Query: 331 DTKSVASVLSDEDTKKELQKR 351
+ + + + +EL+ R
Sbjct: 616 TRQVFSGIKAAYSQPEELEGR 636
>sp|Q92JF7|SCA2_RICCN Putative surface cell antigen sca2 OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=sca2 PE=3 SV=1
Length = 1795
Score = 32.3 bits (72), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 222 DGPECIKEIPLKT-----EGKNPISNFFLKKEIKKEQESKMD--EKSSFDESVKTNLPKR 274
D + IK I L + E K PI F K E+ +E + K + ++ F N +
Sbjct: 866 DTDDAIKRILLSSCKISEELKRPIKLEFNKSELIRELQGKQNPFKQLEFAYINTKNFDQD 925
Query: 275 MKGEPIKEIKEEP-VSGLEEKYSFDTTAQTNLPKSVKDEAVTA--DDIRTQSSVEKGDPD 331
+ G I E+ P + + ++ +F T TNL K++ + A DD+RT ++
Sbjct: 926 IFGNRIDELINNPNILTIVQQATFLTKEDTNLRKTINSDQAQAKLDDLRT--AILSTIKI 983
Query: 332 TKSVASVLSDEDTKKELQKRD---YKEFLADSKPVIDGNNKLE 371
+ + + L D ++++D KEFL + + GNN L+
Sbjct: 984 EELITANLPQHDFIAIVKEKDPELLKEFLKATTLTVTGNNNLD 1026
>sp|P00780|SUBT_BACLI Subtilisin Carlsberg OS=Bacillus licheniformis GN=apr PE=1 SV=1
Length = 379
Score = 32.0 bits (71), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 245 LKKEIKKEQESKMDEKSSFDESVKTNLPKRMKGEPIKEIKEEP-VSGLEEKYSFDTTAQT 303
+KK+I KE K+D++ + K L K E +KE+K +P V+ +EE + AQT
Sbjct: 53 VKKDIIKESGGKVDKQFRIINAAKAKLDK----EALKEVKNDPDVAYVEEDHVAHALAQT 108
Query: 304 NLPKSVKDEAVTADDIRTQ 322
+P + + AD ++ Q
Sbjct: 109 -VPYGI--PLIKADKVQAQ 124
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 159,535,116
Number of Sequences: 539616
Number of extensions: 7163773
Number of successful extensions: 19806
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 248
Number of HSP's that attempted gapping in prelim test: 19102
Number of HSP's gapped (non-prelim): 709
length of query: 398
length of database: 191,569,459
effective HSP length: 120
effective length of query: 278
effective length of database: 126,815,539
effective search space: 35254719842
effective search space used: 35254719842
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)