Query 015903
Match_columns 398
No_of_seqs 513 out of 2818
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 01:59:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015903.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015903hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03084 alpha/beta hydrolase 100.0 7.3E-53 1.6E-57 386.7 35.2 379 4-393 3-383 (383)
2 PLN02824 hydrolase, alpha/beta 100.0 1.4E-33 2.9E-38 254.9 25.1 268 117-394 10-294 (294)
3 PRK03592 haloalkane dehalogena 100.0 1.7E-33 3.8E-38 254.3 24.1 268 120-396 12-291 (295)
4 PRK00870 haloalkane dehalogena 100.0 8.4E-33 1.8E-37 250.5 25.7 258 125-394 34-301 (302)
5 PRK03204 haloalkane dehalogena 100.0 3.4E-32 7.5E-37 243.9 26.0 270 112-391 11-285 (286)
6 TIGR02240 PHA_depoly_arom poly 100.0 1.6E-32 3.4E-37 245.6 22.7 254 122-394 9-266 (276)
7 KOG4178 Soluble epoxide hydrol 100.0 1E-32 2.3E-37 237.3 19.8 271 114-394 21-320 (322)
8 PLN02679 hydrolase, alpha/beta 100.0 7.3E-32 1.6E-36 249.2 24.8 257 126-395 73-358 (360)
9 TIGR03056 bchO_mg_che_rel puta 100.0 2.1E-31 4.6E-36 238.7 22.9 260 120-392 11-278 (278)
10 PLN02385 hydrolase; alpha/beta 100.0 5.4E-31 1.2E-35 243.1 25.9 259 122-395 69-346 (349)
11 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.7E-30 3.7E-35 233.4 23.1 257 124-393 19-282 (282)
12 PLN03087 BODYGUARD 1 domain co 100.0 3E-30 6.5E-35 241.6 25.1 264 122-394 183-479 (481)
13 KOG4409 Predicted hydrolase/ac 100.0 1.9E-30 4.2E-35 223.7 21.3 286 89-393 53-363 (365)
14 PRK10349 carboxylesterase BioH 100.0 1.7E-30 3.7E-35 229.9 20.8 248 126-392 3-254 (256)
15 PLN02965 Probable pheophorbida 100.0 2.1E-30 4.6E-35 229.0 21.4 242 139-394 5-253 (255)
16 PRK10673 acyl-CoA esterase; Pr 100.0 3.2E-30 7E-35 228.1 22.1 241 133-394 12-255 (255)
17 PLN02578 hydrolase 100.0 1.2E-29 2.6E-34 234.3 25.7 259 122-392 73-353 (354)
18 PRK06489 hypothetical protein; 100.0 7.2E-30 1.6E-34 236.4 24.1 266 123-396 48-359 (360)
19 TIGR03611 RutD pyrimidine util 100.0 5.7E-30 1.2E-34 226.4 21.6 250 128-393 2-257 (257)
20 PHA02857 monoglyceride lipase; 100.0 6E-29 1.3E-33 222.6 26.1 253 121-395 7-274 (276)
21 PLN02298 hydrolase, alpha/beta 100.0 9E-29 1.9E-33 227.0 25.4 257 122-395 40-318 (330)
22 PRK10749 lysophospholipase L2; 100.0 1.6E-28 3.4E-33 224.7 25.4 265 122-394 38-329 (330)
23 TIGR02427 protocat_pcaD 3-oxoa 100.0 3.2E-29 7E-34 220.3 19.9 245 127-392 2-251 (251)
24 PRK11126 2-succinyl-6-hydroxy- 100.0 3.7E-29 8E-34 219.6 19.7 236 137-393 2-241 (242)
25 PRK08775 homoserine O-acetyltr 100.0 2.4E-28 5.3E-33 224.8 21.5 263 123-396 44-341 (343)
26 TIGR01738 bioH putative pimelo 100.0 3.7E-28 7.9E-33 212.9 19.3 236 138-391 5-245 (245)
27 PRK00175 metX homoserine O-ace 100.0 2.4E-27 5.3E-32 220.5 23.3 269 123-395 31-375 (379)
28 TIGR01392 homoserO_Ac_trn homo 100.0 1.1E-27 2.4E-32 221.2 20.3 268 123-392 14-351 (351)
29 PF12697 Abhydrolase_6: Alpha/ 100.0 3.4E-28 7.3E-33 210.4 15.9 227 140-386 1-228 (228)
30 PRK07581 hypothetical protein; 100.0 1.4E-27 3.1E-32 219.8 20.7 267 123-394 24-336 (339)
31 PRK14875 acetoin dehydrogenase 100.0 1.4E-27 3E-32 223.1 20.7 253 122-393 116-370 (371)
32 PLN02211 methyl indole-3-aceta 100.0 1.7E-27 3.6E-32 211.7 20.1 258 123-393 5-269 (273)
33 KOG1455 Lysophospholipase [Lip 100.0 3.8E-27 8.2E-32 199.7 20.7 259 122-394 35-312 (313)
34 TIGR01250 pro_imino_pep_2 prol 100.0 6.3E-27 1.4E-31 210.3 23.2 260 121-392 8-288 (288)
35 KOG1454 Predicted hydrolase/ac 100.0 2E-27 4.4E-32 213.9 19.7 249 135-395 56-325 (326)
36 TIGR03695 menH_SHCHC 2-succiny 100.0 3.7E-27 8.1E-32 207.0 20.8 245 137-392 1-251 (251)
37 COG2267 PldB Lysophospholipase 100.0 2.1E-26 4.6E-31 205.2 23.6 262 122-395 17-295 (298)
38 PLN02652 hydrolase; alpha/beta 100.0 2.4E-26 5.2E-31 212.8 24.3 254 122-394 118-387 (395)
39 PLN02894 hydrolase, alpha/beta 99.9 2.6E-26 5.6E-31 214.4 20.5 254 133-393 101-384 (402)
40 TIGR01249 pro_imino_pep_1 prol 99.9 1.8E-25 4E-30 202.6 23.0 118 123-243 13-131 (306)
41 PLN02980 2-oxoglutarate decarb 99.9 2E-25 4.3E-30 238.5 22.6 256 127-395 1360-1640(1655)
42 PRK05855 short chain dehydroge 99.9 2.9E-25 6.3E-30 219.8 18.9 264 121-394 9-292 (582)
43 TIGR01607 PST-A Plasmodium sub 99.9 5.7E-24 1.2E-28 194.1 23.3 254 123-392 6-331 (332)
44 COG1647 Esterase/lipase [Gener 99.9 6.6E-24 1.4E-28 171.3 18.4 220 138-393 16-243 (243)
45 KOG2382 Predicted alpha/beta h 99.9 1E-23 2.2E-28 182.1 18.8 248 135-394 50-313 (315)
46 KOG2984 Predicted hydrolase [G 99.9 4E-24 8.7E-29 169.2 13.6 240 117-394 23-276 (277)
47 PLN02511 hydrolase 99.9 4.5E-24 9.7E-29 198.6 16.4 246 135-394 98-365 (388)
48 PRK06765 homoserine O-acetyltr 99.9 1.6E-22 3.4E-27 186.7 22.5 271 123-393 39-387 (389)
49 PRK05077 frsA fermentation/res 99.9 8E-22 1.7E-26 184.3 22.8 215 135-394 192-412 (414)
50 PRK10985 putative hydrolase; P 99.9 3.2E-22 6.9E-27 182.6 18.7 246 136-394 57-320 (324)
51 PRK13604 luxD acyl transferase 99.9 5E-21 1.1E-25 167.6 20.5 205 137-381 37-250 (307)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 2.3E-20 5E-25 166.1 23.2 227 136-393 25-274 (274)
53 PRK10566 esterase; Provisional 99.9 7.6E-21 1.6E-25 167.5 19.7 215 126-394 14-248 (249)
54 PF00561 Abhydrolase_1: alpha/ 99.9 2.8E-22 6E-27 174.2 9.5 216 164-388 1-229 (230)
55 PRK11071 esterase YqiA; Provis 99.9 1E-20 2.2E-25 158.2 18.0 182 138-392 2-189 (190)
56 PLN02872 triacylglycerol lipas 99.9 7E-21 1.5E-25 175.7 18.5 282 110-394 39-389 (395)
57 COG1506 DAP2 Dipeptidyl aminop 99.9 2.3E-21 4.9E-26 190.6 13.4 207 138-396 395-618 (620)
58 KOG2564 Predicted acetyltransf 99.9 6.3E-21 1.4E-25 159.0 12.9 245 126-396 63-329 (343)
59 TIGR01836 PHA_synth_III_C poly 99.9 4.3E-20 9.3E-25 170.5 18.6 264 123-394 46-350 (350)
60 TIGR01838 PHA_synth_I poly(R)- 99.8 4.6E-19 9.9E-24 168.1 20.8 248 127-381 177-462 (532)
61 KOG1552 Predicted alpha/beta h 99.8 2.2E-19 4.7E-24 149.8 15.5 183 137-393 60-251 (258)
62 COG0596 MhpC Predicted hydrola 99.8 1.4E-18 3.1E-23 153.4 21.4 256 123-392 8-280 (282)
63 PF06342 DUF1057: Alpha/beta h 99.8 8E-18 1.7E-22 142.3 23.8 243 125-391 21-296 (297)
64 PF00326 Peptidase_S9: Prolyl 99.8 9.1E-20 2E-24 156.5 11.8 194 152-395 2-210 (213)
65 KOG4391 Predicted alpha/beta h 99.8 1.6E-19 3.4E-24 144.9 12.0 211 122-396 62-284 (300)
66 PF12695 Abhydrolase_5: Alpha/ 99.8 3.6E-19 7.8E-24 143.1 11.6 142 139-374 1-145 (145)
67 COG0429 Predicted hydrolase of 99.8 1.5E-18 3.3E-23 149.7 14.3 247 135-393 73-339 (345)
68 PRK07868 acyl-CoA synthetase; 99.8 2.9E-18 6.2E-23 178.0 17.8 243 136-396 66-363 (994)
69 PRK11460 putative hydrolase; P 99.8 1.5E-17 3.3E-22 143.8 17.2 175 135-392 14-210 (232)
70 TIGR02821 fghA_ester_D S-formy 99.7 2.9E-16 6.3E-21 139.9 21.7 201 136-393 41-273 (275)
71 PLN02442 S-formylglutathione h 99.7 1.6E-16 3.6E-21 141.7 19.3 187 136-376 46-264 (283)
72 TIGR03101 hydr2_PEP hydrolase, 99.7 5.5E-17 1.2E-21 141.6 13.5 112 128-243 16-135 (266)
73 KOG1838 Alpha/beta hydrolase [ 99.7 2E-16 4.4E-21 141.7 17.4 249 136-393 124-387 (409)
74 KOG4667 Predicted esterase [Li 99.7 2.2E-16 4.8E-21 126.9 15.7 214 137-391 33-255 (269)
75 COG2021 MET2 Homoserine acetyl 99.7 2.2E-16 4.8E-21 138.7 17.1 268 123-393 34-367 (368)
76 PF03096 Ndr: Ndr family; Int 99.7 1.4E-16 3.1E-21 136.6 15.1 251 126-396 10-281 (283)
77 PLN00021 chlorophyllase 99.7 2E-16 4.3E-21 141.9 14.6 106 133-242 48-166 (313)
78 COG3208 GrsT Predicted thioest 99.7 1.1E-15 2.4E-20 127.0 17.7 222 136-393 6-235 (244)
79 KOG2931 Differentiation-relate 99.7 2.9E-15 6.3E-20 126.5 20.3 250 126-395 33-307 (326)
80 PF05448 AXE1: Acetyl xylan es 99.7 1.2E-15 2.7E-20 137.0 15.6 265 85-394 26-320 (320)
81 PRK10115 protease 2; Provision 99.7 1.8E-15 4E-20 149.9 17.3 190 135-375 443-654 (686)
82 TIGR01840 esterase_phb esteras 99.7 8.2E-15 1.8E-19 125.4 17.0 107 136-242 12-130 (212)
83 COG2945 Predicted hydrolase of 99.6 2.4E-14 5.2E-19 113.6 16.2 179 125-392 16-205 (210)
84 KOG2565 Predicted hydrolases o 99.6 3.9E-15 8.5E-20 129.3 12.4 143 86-243 113-265 (469)
85 COG0400 Predicted esterase [Ge 99.6 1.5E-14 3.2E-19 120.6 14.6 176 133-394 14-205 (207)
86 PF01738 DLH: Dienelactone hyd 99.6 5.8E-15 1.3E-19 127.1 12.6 181 133-394 10-217 (218)
87 PF02230 Abhydrolase_2: Phosph 99.6 2E-14 4.4E-19 123.4 15.8 179 134-394 11-215 (216)
88 PRK10162 acetyl esterase; Prov 99.6 6.8E-14 1.5E-18 127.1 16.9 210 136-394 80-315 (318)
89 PF06500 DUF1100: Alpha/beta h 99.6 2.8E-14 6.2E-19 129.1 14.0 220 131-394 184-409 (411)
90 COG0412 Dienelactone hydrolase 99.6 2E-13 4.3E-18 117.7 18.2 184 129-394 19-233 (236)
91 TIGR01849 PHB_depoly_PhaZ poly 99.6 2.9E-13 6.3E-18 123.8 19.2 249 138-394 103-406 (406)
92 COG3458 Acetyl esterase (deace 99.6 8.3E-14 1.8E-18 116.4 13.7 263 85-395 26-318 (321)
93 TIGR01839 PHA_synth_II poly(R) 99.6 3.6E-13 7.8E-18 126.7 19.5 104 136-246 214-332 (560)
94 PF00975 Thioesterase: Thioest 99.6 4E-13 8.7E-18 116.7 18.5 215 138-391 1-229 (229)
95 TIGR00976 /NonD putative hydro 99.5 1.6E-13 3.4E-18 134.0 16.9 117 123-244 5-134 (550)
96 PF06821 Ser_hydrolase: Serine 99.5 6.7E-14 1.4E-18 114.1 11.1 154 140-378 1-157 (171)
97 TIGR03230 lipo_lipase lipoprot 99.5 8.2E-14 1.8E-18 128.8 12.8 105 135-243 39-155 (442)
98 cd00707 Pancreat_lipase_like P 99.5 1.8E-13 4E-18 121.2 9.1 105 136-244 35-149 (275)
99 PF08538 DUF1749: Protein of u 99.4 4E-12 8.6E-17 110.6 15.0 110 126-246 22-152 (303)
100 KOG2624 Triglyceride lipase-ch 99.4 3E-12 6.4E-17 116.9 13.5 284 110-393 43-397 (403)
101 PF05728 UPF0227: Uncharacteri 99.4 8.1E-12 1.8E-16 103.0 14.3 179 140-391 2-186 (187)
102 COG4757 Predicted alpha/beta h 99.4 1E-11 2.2E-16 101.6 13.7 220 139-391 32-280 (281)
103 PF12146 Hydrolase_4: Putative 99.4 1.4E-12 3E-17 91.5 7.6 76 124-202 1-79 (79)
104 PF02273 Acyl_transf_2: Acyl t 99.4 6.5E-11 1.4E-15 97.8 18.1 220 123-381 11-243 (294)
105 KOG2100 Dipeptidyl aminopeptid 99.4 9.7E-12 2.1E-16 124.0 14.4 222 117-395 500-748 (755)
106 PF10230 DUF2305: Uncharacteri 99.3 3.8E-11 8.2E-16 105.7 15.7 109 137-245 2-125 (266)
107 COG3571 Predicted hydrolase of 99.3 1.3E-10 2.7E-15 89.5 15.9 177 139-393 16-210 (213)
108 PF07859 Abhydrolase_3: alpha/ 99.3 3.3E-12 7E-17 109.5 8.2 98 140-244 1-112 (211)
109 PRK05371 x-prolyl-dipeptidyl a 99.3 6E-11 1.3E-15 118.8 17.1 218 157-394 272-519 (767)
110 TIGR03502 lipase_Pla1_cef extr 99.3 1.2E-11 2.6E-16 121.5 10.7 107 121-227 424-575 (792)
111 COG3545 Predicted esterase of 99.3 1.7E-10 3.7E-15 90.9 14.7 171 138-393 3-178 (181)
112 PF12740 Chlorophyllase2: Chlo 99.3 8.2E-11 1.8E-15 100.6 14.0 110 129-242 9-131 (259)
113 PRK10252 entF enterobactin syn 99.3 2.1E-10 4.6E-15 124.2 18.8 99 137-241 1068-1170(1296)
114 KOG2281 Dipeptidyl aminopeptid 99.2 1.5E-10 3.3E-15 107.7 13.3 201 137-394 642-867 (867)
115 PF02129 Peptidase_S15: X-Pro 99.2 2.9E-10 6.2E-15 101.2 14.5 107 134-245 17-139 (272)
116 PF10503 Esterase_phd: Esteras 99.2 4.9E-10 1.1E-14 94.7 15.0 106 137-243 16-133 (220)
117 KOG1515 Arylacetamide deacetyl 99.2 2.9E-09 6.2E-14 95.6 18.5 219 136-394 89-335 (336)
118 PF09752 DUF2048: Uncharacteri 99.2 3.2E-09 7E-14 94.0 18.3 242 135-392 90-347 (348)
119 PF06028 DUF915: Alpha/beta hy 99.2 1.5E-09 3.3E-14 93.9 15.5 203 137-392 11-253 (255)
120 COG3319 Thioesterase domains o 99.2 3.5E-09 7.5E-14 91.3 17.3 100 138-243 1-104 (257)
121 PF03959 FSH1: Serine hydrolas 99.1 1.3E-10 2.8E-15 99.1 8.3 163 137-378 4-205 (212)
122 PTZ00472 serine carboxypeptida 99.1 1.5E-08 3.2E-13 96.3 22.7 118 126-245 62-219 (462)
123 COG0657 Aes Esterase/lipase [L 99.1 2.2E-09 4.7E-14 97.7 16.3 103 136-245 78-194 (312)
124 KOG3043 Predicted hydrolase re 99.1 6.1E-10 1.3E-14 91.1 10.7 185 123-394 26-240 (242)
125 COG3243 PhaC Poly(3-hydroxyalk 99.1 8.3E-10 1.8E-14 98.9 12.4 102 137-245 107-220 (445)
126 PF07819 PGAP1: PGAP1-like pro 99.1 1.1E-09 2.3E-14 93.9 12.6 107 136-245 3-126 (225)
127 PF07224 Chlorophyllase: Chlor 99.1 2.4E-09 5.2E-14 89.7 12.1 107 134-244 43-159 (307)
128 KOG3975 Uncharacterized conser 99.1 2.2E-08 4.8E-13 83.1 17.6 246 135-391 27-300 (301)
129 PF08840 BAAT_C: BAAT / Acyl-C 99.0 1.9E-09 4.1E-14 91.8 9.8 38 206-244 21-58 (213)
130 PF06057 VirJ: Bacterial virul 99.0 4.7E-09 1E-13 84.9 11.0 96 138-242 3-107 (192)
131 KOG4627 Kynurenine formamidase 99.0 4.6E-09 9.9E-14 84.6 10.1 202 126-391 55-268 (270)
132 PRK04940 hypothetical protein; 99.0 1.1E-07 2.3E-12 76.9 17.7 170 140-393 2-179 (180)
133 PF03403 PAF-AH_p_II: Platelet 99.0 7.6E-09 1.7E-13 95.5 12.4 106 136-242 99-262 (379)
134 PF12715 Abhydrolase_7: Abhydr 99.0 6.3E-09 1.4E-13 93.1 10.9 132 110-242 83-260 (390)
135 KOG2112 Lysophospholipase [Lip 98.9 1E-08 2.2E-13 83.5 11.1 175 138-393 4-203 (206)
136 KOG2551 Phospholipase/carboxyh 98.9 6.4E-08 1.4E-12 79.5 15.6 59 333-392 161-222 (230)
137 COG4099 Predicted peptidase [G 98.9 1.2E-08 2.6E-13 86.8 11.8 115 123-242 170-304 (387)
138 COG4188 Predicted dienelactone 98.9 2.4E-09 5.1E-14 95.1 6.8 95 136-230 70-182 (365)
139 PF03583 LIP: Secretory lipase 98.9 1.2E-08 2.5E-13 91.1 10.9 61 333-393 217-284 (290)
140 smart00824 PKS_TE Thioesterase 98.9 1.3E-07 2.8E-12 80.5 17.0 95 142-242 2-102 (212)
141 KOG1553 Predicted alpha/beta h 98.8 3.2E-08 6.9E-13 86.0 9.9 99 138-241 244-344 (517)
142 PLN02733 phosphatidylcholine-s 98.7 4.5E-08 9.8E-13 91.6 9.0 95 148-245 105-204 (440)
143 PF11339 DUF3141: Protein of u 98.7 1E-06 2.2E-11 81.4 16.3 82 155-245 92-178 (581)
144 PF01674 Lipase_2: Lipase (cla 98.7 1.6E-08 3.4E-13 85.4 3.6 101 138-240 2-107 (219)
145 COG3509 LpqC Poly(3-hydroxybut 98.6 7.5E-07 1.6E-11 76.6 12.5 114 129-242 52-179 (312)
146 KOG3847 Phospholipase A2 (plat 98.6 2.8E-07 6.2E-12 79.2 9.7 105 137-242 118-275 (399)
147 PF00450 Peptidase_S10: Serine 98.6 1.4E-06 3E-11 82.8 15.6 121 124-245 23-184 (415)
148 KOG3253 Predicted alpha/beta h 98.6 4.1E-07 8.8E-12 84.8 10.0 154 137-376 176-347 (784)
149 PF00151 Lipase: Lipase; Inte 98.5 7.4E-08 1.6E-12 87.2 4.7 106 135-244 69-189 (331)
150 COG2936 Predicted acyl esteras 98.5 1.3E-06 2.9E-11 82.7 12.7 117 123-244 28-161 (563)
151 PF05677 DUF818: Chlamydia CHL 98.5 5.8E-07 1.3E-11 79.0 9.0 86 136-228 136-236 (365)
152 PRK10439 enterobactin/ferric e 98.5 4.4E-06 9.4E-11 78.3 15.0 104 136-242 208-323 (411)
153 COG4814 Uncharacterized protei 98.4 3.9E-05 8.5E-10 64.5 17.0 106 138-243 46-177 (288)
154 PF05990 DUF900: Alpha/beta hy 98.4 2.7E-06 5.8E-11 73.4 10.6 106 136-244 17-139 (233)
155 COG3150 Predicted esterase [Ge 98.4 2.1E-05 4.6E-10 61.6 14.2 90 140-244 2-93 (191)
156 COG1505 Serine proteases of th 98.4 3E-06 6.4E-11 79.6 10.9 222 122-393 402-645 (648)
157 PF04301 DUF452: Protein of un 98.4 2E-05 4.3E-10 66.0 14.5 80 137-243 11-91 (213)
158 PF05705 DUF829: Eukaryotic pr 98.4 2.7E-05 5.8E-10 68.0 16.1 60 332-391 175-240 (240)
159 PF11144 DUF2920: Protein of u 98.3 4.5E-05 9.7E-10 69.4 16.9 36 208-243 185-220 (403)
160 PF05057 DUF676: Putative seri 98.3 8.1E-06 1.8E-10 69.8 11.7 89 137-226 4-97 (217)
161 KOG1282 Serine carboxypeptidas 98.3 0.00016 3.4E-09 67.7 20.8 122 123-245 55-216 (454)
162 COG1075 LipA Predicted acetylt 98.3 2.5E-06 5.4E-11 77.9 8.7 102 137-244 59-166 (336)
163 PF10340 DUF2424: Protein of u 98.3 2.9E-05 6.2E-10 70.4 15.1 106 136-245 121-238 (374)
164 KOG4840 Predicted hydrolases o 98.3 2.1E-05 4.5E-10 64.6 12.5 101 138-245 37-147 (299)
165 PLN02606 palmitoyl-protein thi 98.2 0.00012 2.7E-09 64.1 17.0 99 137-243 26-133 (306)
166 KOG2237 Predicted serine prote 98.1 0.00013 2.9E-09 69.2 15.4 183 41-244 391-586 (712)
167 PF12048 DUF3530: Protein of u 98.1 0.00059 1.3E-08 61.6 19.2 117 127-243 76-230 (310)
168 COG1073 Hydrolases of the alph 98.1 1.6E-06 3.5E-11 78.0 2.7 59 336-394 233-297 (299)
169 PLN02209 serine carboxypeptida 98.1 0.0004 8.7E-09 65.5 18.5 60 335-395 351-436 (437)
170 PLN02633 palmitoyl protein thi 98.1 0.00042 9.2E-09 60.9 16.9 100 137-243 25-132 (314)
171 PF05577 Peptidase_S28: Serine 98.0 4E-05 8.7E-10 73.1 11.2 108 136-244 28-150 (434)
172 PLN03016 sinapoylglucose-malat 98.0 0.00025 5.4E-09 66.9 16.0 60 335-395 347-432 (433)
173 PF00756 Esterase: Putative es 98.0 1.6E-05 3.5E-10 69.9 7.6 52 193-244 98-152 (251)
174 KOG3101 Esterase D [General fu 98.0 1.1E-05 2.4E-10 65.7 5.7 109 137-245 44-179 (283)
175 PF10142 PhoPQ_related: PhoPQ- 98.0 0.00011 2.4E-09 67.0 12.2 155 197-393 159-319 (367)
176 PF08386 Abhydrolase_4: TAP-li 97.9 3.2E-05 7E-10 57.4 6.4 61 335-395 34-95 (103)
177 COG1770 PtrB Protease II [Amin 97.9 0.0011 2.4E-08 63.6 17.8 119 126-244 435-564 (682)
178 COG4782 Uncharacterized protei 97.9 5.4E-05 1.2E-09 67.3 8.2 110 135-244 114-236 (377)
179 KOG1551 Uncharacterized conser 97.9 0.00091 2E-08 56.7 14.6 57 338-395 309-367 (371)
180 cd00312 Esterase_lipase Estera 97.8 7.1E-05 1.5E-09 72.8 9.1 105 135-243 93-214 (493)
181 KOG3724 Negative regulator of 97.8 0.00034 7.3E-09 68.0 12.8 103 136-245 88-223 (973)
182 KOG2541 Palmitoyl protein thio 97.8 0.00054 1.2E-08 58.3 12.4 96 138-242 24-128 (296)
183 COG3946 VirJ Type IV secretory 97.6 0.00042 9E-09 62.4 9.5 84 137-229 260-348 (456)
184 PF02450 LCAT: Lecithin:choles 97.6 0.00063 1.4E-08 63.6 10.7 82 152-245 66-163 (389)
185 PLN02213 sinapoylglucose-malat 97.5 0.0017 3.6E-08 59.1 12.8 59 335-394 233-317 (319)
186 COG2272 PnbA Carboxylesterase 97.5 0.00027 6E-09 65.6 7.3 120 123-243 78-218 (491)
187 COG4553 DepA Poly-beta-hydroxy 97.5 0.01 2.2E-07 51.3 15.7 104 137-245 103-212 (415)
188 PF00135 COesterase: Carboxyle 97.4 0.0011 2.3E-08 65.3 10.8 106 137-244 125-247 (535)
189 KOG2183 Prolylcarboxypeptidase 97.4 0.00041 8.9E-09 62.6 6.9 104 138-242 81-202 (492)
190 PF06441 EHN: Epoxide hydrolas 97.3 3.9E-05 8.5E-10 57.4 -0.4 56 83-156 54-111 (112)
191 COG0627 Predicted esterase [Ge 97.3 0.0014 3.1E-08 58.8 9.2 58 188-245 127-190 (316)
192 COG2939 Carboxypeptidase C (ca 97.3 0.0095 2.1E-07 55.8 14.5 109 136-246 100-240 (498)
193 KOG3967 Uncharacterized conser 97.3 0.0036 7.7E-08 51.4 9.8 108 137-244 101-229 (297)
194 COG2382 Fes Enterochelin ester 97.1 0.0086 1.9E-07 52.4 11.5 118 125-244 83-214 (299)
195 PF02089 Palm_thioest: Palmito 97.1 0.00057 1.2E-08 59.5 4.3 102 137-242 5-116 (279)
196 KOG2182 Hydrolytic enzymes of 97.0 0.0072 1.6E-07 56.3 10.4 111 134-244 83-209 (514)
197 cd00741 Lipase Lipase. Lipase 97.0 0.0018 3.9E-08 52.1 5.9 54 190-243 7-68 (153)
198 COG4947 Uncharacterized protei 96.8 0.0048 1E-07 48.9 6.4 47 198-244 92-138 (227)
199 PF01764 Lipase_3: Lipase (cla 96.6 0.0034 7.3E-08 49.6 4.9 39 190-228 47-85 (140)
200 PF06259 Abhydrolase_8: Alpha/ 96.5 0.11 2.3E-06 42.6 12.9 53 190-242 87-144 (177)
201 PLN02517 phosphatidylcholine-s 96.5 0.0067 1.4E-07 58.2 6.7 90 151-244 156-265 (642)
202 KOG2369 Lecithin:cholesterol a 96.5 0.0021 4.5E-08 59.5 3.2 87 151-242 124-225 (473)
203 PF04083 Abhydro_lipase: Parti 96.4 0.0051 1.1E-07 40.7 3.8 45 110-154 7-60 (63)
204 KOG1283 Serine carboxypeptidas 96.3 0.66 1.4E-05 41.1 16.7 108 136-244 30-168 (414)
205 PF11187 DUF2974: Protein of u 96.2 0.021 4.6E-07 48.8 7.3 52 192-244 70-125 (224)
206 PF07082 DUF1350: Protein of u 96.1 0.52 1.1E-05 40.4 15.2 97 139-240 19-123 (250)
207 COG2819 Predicted hydrolase of 96.0 0.014 3.1E-07 50.3 5.4 38 205-242 135-172 (264)
208 KOG1202 Animal-type fatty acid 96.0 0.26 5.6E-06 51.1 14.5 95 135-241 2121-2218(2376)
209 KOG2521 Uncharacterized conser 95.9 0.16 3.6E-06 46.1 11.8 60 335-394 225-290 (350)
210 cd00519 Lipase_3 Lipase (class 95.8 0.015 3.2E-07 50.3 4.7 36 205-240 126-166 (229)
211 PLN02162 triacylglycerol lipas 95.6 0.03 6.5E-07 52.3 6.3 52 190-241 261-320 (475)
212 KOG4372 Predicted alpha/beta h 95.5 0.015 3.2E-07 53.0 3.7 84 136-223 79-166 (405)
213 PLN00413 triacylglycerol lipas 95.5 0.038 8.2E-07 51.8 6.4 52 191-242 268-327 (479)
214 PF05576 Peptidase_S37: PS-10 95.2 0.084 1.8E-06 48.4 7.7 106 135-243 61-170 (448)
215 COG2830 Uncharacterized protei 94.9 0.45 9.7E-06 37.6 9.8 79 138-243 12-91 (214)
216 PLN02571 triacylglycerol lipas 94.9 0.037 8E-07 51.3 4.5 37 191-227 208-246 (413)
217 PLN02454 triacylglycerol lipas 94.9 0.039 8.4E-07 51.1 4.6 35 193-227 212-248 (414)
218 KOG1516 Carboxylesterase and r 94.8 0.2 4.2E-06 49.6 9.9 105 137-243 112-233 (545)
219 TIGR03712 acc_sec_asp2 accesso 94.8 3.1 6.6E-05 39.4 16.6 106 128-242 280-390 (511)
220 PF06850 PHB_depo_C: PHB de-po 94.3 0.26 5.7E-06 40.4 7.5 60 335-394 134-202 (202)
221 PLN02408 phospholipase A1 94.2 0.068 1.5E-06 48.8 4.5 37 192-228 183-221 (365)
222 PF01083 Cutinase: Cutinase; 94.1 0.09 1.9E-06 43.4 4.8 52 193-244 67-124 (179)
223 PLN02934 triacylglycerol lipas 93.9 0.088 1.9E-06 49.9 4.8 37 190-226 304-340 (515)
224 PLN02310 triacylglycerol lipas 93.9 0.14 3E-06 47.4 6.0 37 191-227 189-229 (405)
225 PF11288 DUF3089: Protein of u 93.6 0.15 3.2E-06 42.7 5.2 70 159-228 41-116 (207)
226 PLN02324 triacylglycerol lipas 93.3 0.11 2.4E-06 48.2 4.2 37 191-227 197-235 (415)
227 COG4287 PqaA PhoPQ-activated p 93.2 0.35 7.6E-06 43.6 7.0 45 332-376 326-372 (507)
228 PLN02802 triacylglycerol lipas 92.9 0.14 3E-06 48.5 4.5 37 192-228 313-351 (509)
229 PLN02753 triacylglycerol lipas 92.7 0.15 3.3E-06 48.5 4.3 37 191-227 291-332 (531)
230 PLN03037 lipase class 3 family 92.3 0.18 3.8E-06 48.0 4.3 37 191-227 298-338 (525)
231 PLN02719 triacylglycerol lipas 92.1 0.19 4.2E-06 47.7 4.3 36 192-227 278-318 (518)
232 PF07519 Tannase: Tannase and 92.1 1.3 2.9E-05 42.6 10.0 88 156-244 52-152 (474)
233 PLN02761 lipase class 3 family 92.0 0.21 4.6E-06 47.5 4.4 37 191-227 272-314 (527)
234 PF05277 DUF726: Protein of un 91.5 0.63 1.4E-05 42.4 6.7 41 205-245 218-263 (345)
235 KOG4388 Hormone-sensitive lipa 91.1 0.83 1.8E-05 43.8 7.2 115 136-257 395-523 (880)
236 KOG4569 Predicted lipase [Lipi 90.3 0.37 8E-06 44.2 4.2 38 190-227 154-191 (336)
237 PLN02847 triacylglycerol lipas 89.7 0.54 1.2E-05 45.6 4.8 21 207-227 251-271 (633)
238 PF07519 Tannase: Tannase and 85.4 2.2 4.8E-05 41.2 6.3 60 335-394 353-427 (474)
239 KOG4540 Putative lipase essent 83.9 2.4 5.3E-05 37.0 5.2 27 202-228 271-297 (425)
240 COG5153 CVT17 Putative lipase 83.9 2.4 5.3E-05 37.0 5.2 27 202-228 271-297 (425)
241 PF08237 PE-PPE: PE-PPE domain 82.2 6.4 0.00014 33.8 7.2 64 163-228 2-69 (225)
242 PF09949 DUF2183: Uncharacteri 82.2 17 0.00037 26.6 8.8 82 153-237 13-97 (100)
243 PF10605 3HBOH: 3HB-oligomer h 75.0 6.5 0.00014 38.4 5.4 56 320-375 539-604 (690)
244 KOG2029 Uncharacterized conser 71.0 8.5 0.00018 37.5 5.2 36 206-241 525-571 (697)
245 KOG4389 Acetylcholinesterase/B 70.6 46 0.001 32.0 9.6 163 79-245 72-258 (601)
246 PRK12467 peptide synthase; Pro 69.6 20 0.00043 44.7 9.1 96 138-239 3693-3792(3956)
247 KOG2385 Uncharacterized conser 61.6 22 0.00047 34.1 5.8 42 204-245 444-490 (633)
248 PF06792 UPF0261: Uncharacteri 59.3 1.5E+02 0.0032 27.9 10.8 101 138-238 2-126 (403)
249 PF03283 PAE: Pectinacetyleste 58.0 1.2E+02 0.0026 28.2 10.1 39 206-244 155-197 (361)
250 COG1576 Uncharacterized conser 57.2 36 0.00078 27.0 5.5 57 154-223 58-114 (155)
251 PF06309 Torsin: Torsin; Inte 57.0 7.9 0.00017 29.7 1.9 21 133-153 48-68 (127)
252 COG1448 TyrB Aspartate/tyrosin 56.0 54 0.0012 30.3 7.2 85 138-240 172-263 (396)
253 PF09994 DUF2235: Uncharacteri 55.4 86 0.0019 27.9 8.5 22 206-227 91-112 (277)
254 smart00827 PKS_AT Acyl transfe 53.7 13 0.00029 33.3 3.2 30 197-226 72-101 (298)
255 PF00698 Acyl_transf_1: Acyl t 51.3 9.4 0.0002 34.7 1.8 29 197-225 74-102 (318)
256 cd01714 ETF_beta The electron 51.2 62 0.0013 27.2 6.6 64 163-238 76-145 (202)
257 PF05576 Peptidase_S37: PS-10 49.8 22 0.00047 33.3 3.8 56 335-392 351-412 (448)
258 PRK02399 hypothetical protein; 49.7 2.3E+02 0.005 26.7 10.9 101 138-238 4-128 (406)
259 TIGR03131 malonate_mdcH malona 48.3 17 0.00038 32.5 3.0 30 197-226 66-95 (295)
260 PRK10279 hypothetical protein; 48.1 19 0.00042 32.4 3.2 33 197-229 23-55 (300)
261 PF10081 Abhydrolase_9: Alpha/ 48.1 30 0.00066 30.6 4.2 39 207-245 109-150 (289)
262 COG1073 Hydrolases of the alph 47.2 37 0.00081 29.8 5.1 92 136-229 48-154 (299)
263 cd07225 Pat_PNPLA6_PNPLA7 Pata 47.2 22 0.00047 32.2 3.4 32 197-228 33-64 (306)
264 cd07198 Patatin Patatin-like p 46.9 23 0.00049 28.8 3.3 33 197-229 16-48 (172)
265 PF02590 SPOUT_MTase: Predicte 46.5 34 0.00075 27.4 4.1 51 154-217 58-109 (155)
266 TIGR00128 fabD malonyl CoA-acy 43.7 22 0.00047 31.7 2.9 28 199-226 74-102 (290)
267 COG1752 RssA Predicted esteras 41.8 26 0.00057 31.6 3.2 32 197-228 29-60 (306)
268 PRK00103 rRNA large subunit me 41.8 83 0.0018 25.3 5.6 52 155-218 59-110 (157)
269 cd07207 Pat_ExoU_VipD_like Exo 41.8 29 0.00062 28.8 3.2 30 199-228 19-48 (194)
270 cd07227 Pat_Fungal_NTE1 Fungal 41.6 29 0.00063 30.7 3.3 32 197-228 28-59 (269)
271 COG3340 PepE Peptidase E [Amin 41.6 61 0.0013 27.4 4.8 35 137-171 32-70 (224)
272 PRK05282 (alpha)-aspartyl dipe 40.7 63 0.0014 27.9 5.1 36 137-172 31-70 (233)
273 cd07210 Pat_hypo_W_succinogene 40.6 34 0.00073 29.3 3.5 30 199-228 20-49 (221)
274 PF11713 Peptidase_C80: Peptid 40.5 18 0.0004 29.0 1.7 49 170-219 60-116 (157)
275 PF08484 Methyltransf_14: C-me 39.9 84 0.0018 25.3 5.4 50 191-240 51-102 (160)
276 PRK05579 bifunctional phosphop 38.8 2.5E+02 0.0054 26.6 9.1 74 138-214 117-196 (399)
277 COG0529 CysC Adenylylsulfate k 38.0 2.1E+02 0.0045 23.7 7.2 35 136-170 21-58 (197)
278 cd07209 Pat_hypo_Ecoli_Z1214_l 34.3 44 0.00096 28.4 3.2 33 197-229 16-48 (215)
279 KOG0781 Signal recognition par 32.7 1.3E+02 0.0028 29.1 5.9 86 141-238 442-538 (587)
280 COG0218 Predicted GTPase [Gene 32.5 63 0.0014 27.0 3.6 55 335-393 135-198 (200)
281 cd07228 Pat_NTE_like_bacteria 32.2 56 0.0012 26.6 3.4 30 200-229 21-50 (175)
282 KOG2872 Uroporphyrinogen decar 30.9 1.9E+02 0.0042 25.8 6.3 72 137-215 252-336 (359)
283 cd07205 Pat_PNPLA6_PNPLA7_NTE1 30.3 64 0.0014 26.2 3.4 30 199-228 20-49 (175)
284 PF03490 Varsurf_PPLC: Variant 29.7 62 0.0013 20.0 2.3 27 187-213 5-31 (51)
285 TIGR02816 pfaB_fam PfaB family 29.6 48 0.001 32.6 2.9 31 198-228 255-286 (538)
286 KOG2170 ATPase of the AAA+ sup 28.6 36 0.00078 30.5 1.7 23 131-153 103-125 (344)
287 PF14253 AbiH: Bacteriophage a 28.0 66 0.0014 28.3 3.4 15 205-219 233-247 (270)
288 PF00448 SRP54: SRP54-type pro 28.0 3.4E+02 0.0073 22.6 7.4 70 157-238 76-148 (196)
289 PF00326 Peptidase_S9: Prolyl 26.2 1E+02 0.0022 25.8 4.1 40 137-176 144-187 (213)
290 cd07208 Pat_hypo_Ecoli_yjju_li 26.2 79 0.0017 27.8 3.5 33 198-230 17-50 (266)
291 cd07230 Pat_TGL4-5_like Triacy 25.8 47 0.001 31.6 2.1 33 200-232 94-126 (421)
292 PF07521 RMMBL: RNA-metabolisi 25.6 1.6E+02 0.0034 17.5 3.6 18 195-212 21-38 (43)
293 COG4822 CbiK Cobalamin biosynt 25.6 2.5E+02 0.0055 23.8 5.9 59 137-212 138-199 (265)
294 cd07212 Pat_PNPLA9 Patatin-lik 25.5 1.1E+02 0.0024 27.8 4.3 19 210-228 35-53 (312)
295 PF12242 Eno-Rase_NADH_b: NAD( 24.8 90 0.002 21.5 2.7 24 205-228 38-61 (78)
296 cd07224 Pat_like Patatin-like 24.8 82 0.0018 27.1 3.3 32 198-229 18-51 (233)
297 TIGR00521 coaBC_dfp phosphopan 24.3 3.8E+02 0.0082 25.3 7.7 72 138-214 113-193 (390)
298 PRK14974 cell division protein 24.3 4.6E+02 0.01 24.1 8.1 65 162-238 221-287 (336)
299 cd07229 Pat_TGL3_like Triacylg 23.1 64 0.0014 30.3 2.3 35 200-234 104-138 (391)
300 PF02540 NAD_synthase: NAD syn 22.7 2.7E+02 0.0058 24.2 6.0 49 190-239 2-54 (242)
301 COG3933 Transcriptional antite 22.6 4.8E+02 0.01 25.0 7.7 75 138-226 110-184 (470)
302 PF09419 PGP_phosphatase: Mito 22.3 3.3E+02 0.0072 22.1 6.0 52 160-217 36-88 (168)
303 TIGR00246 tRNA_RlmH_YbeA rRNA 22.1 2.5E+02 0.0054 22.4 5.2 50 155-218 58-107 (153)
304 PRK06731 flhF flagellar biosyn 21.7 5.7E+02 0.012 22.7 8.9 74 153-238 142-219 (270)
305 PRK04148 hypothetical protein; 21.5 1.5E+02 0.0032 23.1 3.7 31 206-240 17-47 (134)
306 cd00382 beta_CA Carbonic anhyd 21.1 1.5E+02 0.0033 22.3 3.7 32 191-222 43-74 (119)
307 cd07204 Pat_PNPLA_like Patatin 21.1 1.2E+02 0.0025 26.4 3.5 20 210-229 34-53 (243)
308 COG0541 Ffh Signal recognition 21.1 5.2E+02 0.011 24.8 7.7 65 163-239 182-248 (451)
309 cd07232 Pat_PLPL Patain-like p 20.9 64 0.0014 30.6 1.9 35 201-235 89-123 (407)
310 COG3887 Predicted signaling pr 20.7 2.4E+02 0.0052 28.0 5.6 100 138-241 259-377 (655)
311 cd07231 Pat_SDP1-like Sugar-De 20.4 66 0.0014 29.2 1.8 29 200-228 89-117 (323)
No 1
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=7.3e-53 Score=386.69 Aligned_cols=379 Identities=75% Similarity=1.229 Sum_probs=291.7
Q ss_pred eeccccc-ccccCCCCCCCCCCCCccccccccccCCCcccCcCceeeecccCCCceeeeccccCCCceeecCCccCCCCC
Q 015903 4 VQAKTIS-FHSHHHPQLLPSSPTASTSSFVHGQLKSPACKNRRKCLRISCTYEDDYLIDAPVSEGDGFSFFGGKYSDGSS 82 (398)
Q Consensus 4 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (398)
+|+.++. +|++|+++.+|+++... ++..+|..+..+.++..++|++|+|.+.+|||+|+||+|++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (383)
T PLN03084 3 VQAHNPNSFHSHHFASAPPSSYLRS-----------PHSARKSLSFICKSSDEDDYLIDAPVSVGDGFSFSGGKYSDEPS 71 (383)
T ss_pred ccccCcccccchhcccCCccccccC-----------cccccccceeeeccCcccccceeccccccCcceecCCccCCCCC
Confidence 3555544 88999987666555444 34457889999999999999999999999999999999999999
Q ss_pred CchhhhhccceEEEeecCCCCcccCCCCccccccccccc-cCCeEEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhh
Q 015903 83 PADEWFKQGKIVKAVTVSGSGETAKDPIFGLDLGSASQA-DEIFRWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLS 161 (398)
Q Consensus 83 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~~~~~~-~~g~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~ 161 (398)
++++|+++.++.+.+++.+.....++|+.|++|....+. .+|++++|.+.|+.++|+|||+||++.+...|+.+++.|+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~ 151 (383)
T PLN03084 72 PSDEWFAQGKFVKAHSVQGSGNKAKDPIFGLKMGAQSQASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLS 151 (383)
T ss_pred chHhHHhcCCeEEEeecccCcccccCccccccccceeEEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999977766 8999999999998778999999999999999999999999
Q ss_pred cCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCc
Q 015903 162 KNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPP 241 (398)
Q Consensus 162 ~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 241 (398)
++|+|+++|+||||.|+.+....+..++.+++++++.++++++++++++|+|||+||.+++.+|.++|++|+++|+++++
T Consensus 152 ~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~ 231 (383)
T PLN03084 152 KNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPP 231 (383)
T ss_pred cCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCC
Confidence 99999999999999998775432335899999999999999999999999999999999999999999999999999987
Q ss_pred CcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHH
Q 015903 242 LTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQY 321 (398)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (398)
........+.....+.......++...........+....+.....+....+...+............+.+.+...+...
T Consensus 232 ~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~ 311 (383)
T PLN03084 232 LTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKY 311 (383)
T ss_pred CccccccchHHHHHHHHHHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchh
Confidence 54322122222222222222222222221111111111222223444445555555444433333333333333333333
Q ss_pred HHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhcCCcEEEcCCCCCcccccChHHHHHHHHHHHhh
Q 015903 322 VEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDSNHELIELPMAGHHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 322 ~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 393 (398)
...+.......+|++||++|+|++|.+++.+..+++.+..+.++++++++||++++|+|+++++.|.+||++
T Consensus 312 ~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 312 IEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKSSQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred hHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHhcCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 334444333356899999999999999999988888886688999999999999999999999999999864
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.4e-33 Score=254.88 Aligned_cols=268 Identities=22% Similarity=0.351 Sum_probs=177.5
Q ss_pred ccccccCCeEEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCC---CCCCCCHHHH
Q 015903 117 SASQADEIFRWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPG---YGFDYTLDEY 193 (398)
Q Consensus 117 ~~~~~~~g~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~---~~~~~~~~~~ 193 (398)
..+++.+|.+++|...|++ +|+|||+||+++++..|..+++.|++.|+|+++|+||||.|+.+... ....++++++
T Consensus 10 ~~~~~~~~~~i~y~~~G~~-~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~ 88 (294)
T PLN02824 10 TRTWRWKGYNIRYQRAGTS-GPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETW 88 (294)
T ss_pred CceEEEcCeEEEEEEcCCC-CCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHH
Confidence 4455568999999998853 58999999999999999999999999899999999999999875421 0125889999
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccC-CCCchhHHH----hHHhhhh----h-
Q 015903 194 VASLESFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKH-ANLPSTLSI----FSNFLLG----E- 263 (398)
Q Consensus 194 ~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~----~~~~~~~----~- 263 (398)
++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++...... ...+..... +...+.. .
T Consensus 89 a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (294)
T PLN02824 89 GEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKA 168 (294)
T ss_pred HHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHH
Confidence 99999999999999999999999999999999999999999999998643211 111111110 1110000 0
Q ss_pred hccCC-ccchhhhhhhcc--CCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEE
Q 015903 264 IFSQD-PLRASDKALTSC--GPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTV 340 (398)
Q Consensus 264 ~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvli 340 (398)
++... ........+... .......+....+........ ....+...+....... ......++++|+|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-----~~~~l~~i~~P~lv 239 (294)
T PLN02824 169 FFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPG----AVDVFLDFISYSGGPL-----PEELLPAVKCPVLI 239 (294)
T ss_pred HHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCch----HHHHHHHHhccccccc-----hHHHHhhcCCCeEE
Confidence 00000 000001111100 001111111111111111000 0001111100000000 00112466999999
Q ss_pred EeeCCCCccCchhHHHHHHhc-CCcEEEcCCCCCcccccChHHHHHHHHHHHhhc
Q 015903 341 CWGQRDRWLNNDGVEDFCNDS-NHELIELPMAGHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 341 i~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
|+|++|.++|.+.++.+.+.. +.++++++++||+++.|+|+++++.|.+|++++
T Consensus 240 i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 240 AWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred EEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 999999999999998887777 789999999999999999999999999999864
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.7e-33 Score=254.31 Aligned_cols=268 Identities=22% Similarity=0.367 Sum_probs=176.0
Q ss_pred cccCCeEEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 015903 120 QADEIFRWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLES 199 (398)
Q Consensus 120 ~~~~g~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~ 199 (398)
++.+|.+++|...|+ +|+|||+||++++...|..+++.|.+.++|+++|+||||.|+.+.. .++.+++++|+.+
T Consensus 12 ~~~~g~~i~y~~~G~--g~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~----~~~~~~~a~dl~~ 85 (295)
T PRK03592 12 VEVLGSRMAYIETGE--GDPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDI----DYTFADHARYLDA 85 (295)
T ss_pred EEECCEEEEEEEeCC--CCEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCC----CCCHHHHHHHHHH
Confidence 345899999999885 6899999999999999999999999978999999999999987653 4789999999999
Q ss_pred HHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCC-CCchhHHHhHHhhhhhhccCCccc----hhh
Q 015903 200 FVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHA-NLPSTLSIFSNFLLGEIFSQDPLR----ASD 274 (398)
Q Consensus 200 ~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 274 (398)
++++++.++++++||||||.+++.+|.++|++|+++|++++....... ............+........... ...
T Consensus 86 ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (295)
T PRK03592 86 WFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIE 165 (295)
T ss_pred HHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHh
Confidence 999999999999999999999999999999999999999985432111 111111111111110000000000 000
Q ss_pred hhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhh-----hhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCcc
Q 015903 275 KALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMK-----KQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWL 349 (398)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v 349 (398)
..+.......+.++....+...+........... +...+. ............ ...+|++|+|+|+|++|.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~P~lii~G~~D~~~ 242 (295)
T PRK03592 166 RVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLS-WPRELPIDGEPADVVALVEEYAQ--WLATSDVPKLLINAEPGAIL 242 (295)
T ss_pred hcccCcccccCCHHHHHHHHhhcCCchhhhhhhh-hhhhcCCCCcchhhHhhhhHhHH--HhccCCCCeEEEeccCCccc
Confidence 0111000111222222222222221111000000 000000 000111111111 13567999999999999999
Q ss_pred CchhHHHHHH-hc-CCcEEEcCCCCCcccccChHHHHHHHHHHHhhccc
Q 015903 350 NNDGVEDFCN-DS-NHELIELPMAGHHVQEDSGEELGKVISEIFRKRRL 396 (398)
Q Consensus 350 ~~~~~~~l~~-~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 396 (398)
++....++.. .. +.++++++++||+++.|+|+++++.|.+|+++...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 243 TTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 6655555544 45 89999999999999999999999999999987653
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=8.4e-33 Score=250.55 Aligned_cols=258 Identities=24% Similarity=0.390 Sum_probs=169.7
Q ss_pred eEEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 015903 125 FRWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNE 203 (398)
Q Consensus 125 ~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 203 (398)
++++|...|++++|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+... ..++.+++++|+.+++++
T Consensus 34 ~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~--~~~~~~~~a~~l~~~l~~ 111 (302)
T PRK00870 34 LRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRR--EDYTYARHVEWMRSWFEQ 111 (302)
T ss_pred EEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCc--ccCCHHHHHHHHHHHHHH
Confidence 78999999877789999999999999999999999986 899999999999999765432 257899999999999999
Q ss_pred hCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCC
Q 015903 204 IANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPY 283 (398)
Q Consensus 204 l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (398)
++.++++++||||||.+++.+|.++|++|+++|++++...............+.. .....+..............
T Consensus 112 l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 186 (302)
T PRK00870 112 LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRA-----FSQYSPVLPVGRLVNGGTVR 186 (302)
T ss_pred cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhc-----ccccCchhhHHHHhhccccc
Confidence 9999999999999999999999999999999999997532211101111111000 00000000000111000001
Q ss_pred CCChhhhhhhhcccccCCCchhHHHHHHHhh---h--hhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHH
Q 015903 284 QMKEDDAMVYRSPYLSSGSSGFALTAISKGM---K--KQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFC 358 (398)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~ 358 (398)
....+....+...+....... ....+.... . ......... .....++++|+++|+|++|.++|... +++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~ 261 (302)
T PRK00870 187 DLSDAVRAAYDAPFPDESYKA-GARAFPLLVPTSPDDPAVAANRAA---WAVLERWDKPFLTAFSDSDPITGGGD-AILQ 261 (302)
T ss_pred cCCHHHHHHhhcccCChhhhc-chhhhhhcCCCCCCCcchHHHHHH---HHhhhcCCCceEEEecCCCCcccCch-HHHH
Confidence 111111111111110000000 000000000 0 000000000 11225679999999999999999866 7788
Q ss_pred Hhc-CCc---EEEcCCCCCcccccChHHHHHHHHHHHhhc
Q 015903 359 NDS-NHE---LIELPMAGHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 359 ~~~-~~~---~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
+.+ +.+ +++++++||++++|+|+++++.|.+||+++
T Consensus 262 ~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 262 KRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred hhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 877 655 889999999999999999999999999875
No 5
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=3.4e-32 Score=243.94 Aligned_cols=270 Identities=21% Similarity=0.331 Sum_probs=175.0
Q ss_pred cccccccccccCCeEEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHH
Q 015903 112 GLDLGSASQADEIFRWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLD 191 (398)
Q Consensus 112 G~~~~~~~~~~~g~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 191 (398)
+..+....++.+|.+++|...|+ +|+|||+||++.+...|..+++.|.++|+|+++|+||||.|+.+... .++.+
T Consensus 11 ~~~~~~~~~~~~~~~i~y~~~G~--~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~---~~~~~ 85 (286)
T PRK03204 11 LYPFESRWFDSSRGRIHYIDEGT--GPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGF---GYQID 85 (286)
T ss_pred cccccceEEEcCCcEEEEEECCC--CCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCcc---ccCHH
Confidence 44566666677889999999885 68999999999988899999999999999999999999999876532 57899
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCcc-
Q 015903 192 EYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPL- 270 (398)
Q Consensus 192 ~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 270 (398)
++++++.+++++++.++++++||||||.+++.++..+|++|+++|++++...... ... ...+..............
T Consensus 86 ~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~ 162 (286)
T PRK03204 86 EHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPAD-TLA--MKAFSRVMSSPPVQYAILR 162 (286)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCC-chh--HHHHHHHhccccchhhhhh
Confidence 9999999999999999999999999999999999999999999999887542211 000 000000000000000000
Q ss_pred --chhhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCc
Q 015903 271 --RASDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRW 348 (398)
Q Consensus 271 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~ 348 (398)
......+...............+........ .......+...+. ........+........+++||++|+|++|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~ 240 (286)
T PRK03204 163 RNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAA-ARRGVAEMPKQIL-AARPLLARLAREVPATLGTKPTLLVWGMKDVA 240 (286)
T ss_pred hhHHHHHhccccccCCCCHHHHHHhcCCCCCHH-HHHHHHHHHHhcc-hhhHHHHHhhhhhhhhcCCCCeEEEecCCCcc
Confidence 0001111100011111111111211111100 0000000000000 01111111111111112389999999999998
Q ss_pred cCch-hHHHHHHhc-CCcEEEcCCCCCcccccChHHHHHHHHHHH
Q 015903 349 LNND-GVEDFCNDS-NHELIELPMAGHHVQEDSGEELGKVISEIF 391 (398)
Q Consensus 349 v~~~-~~~~l~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 391 (398)
+++. ..+.+.+.+ +.++++++++||++++|+|+++++.|.+||
T Consensus 241 ~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 241 FRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred cCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 8665 567888888 999999999999999999999999999997
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=1.6e-32 Score=245.57 Aligned_cols=254 Identities=16% Similarity=0.178 Sum_probs=170.9
Q ss_pred cCCeEEEEEecc-CCCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 015903 122 DEIFRWFCVESG-NADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESF 200 (398)
Q Consensus 122 ~~g~~l~~~~~g-~~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~ 200 (398)
.+|.+++|...+ ...+++|||+||++++...|..+++.|.++|+|+++|+||||.|+.+.. .++++++++|+.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~----~~~~~~~~~~~~~~ 84 (276)
T TIGR02240 9 LDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRH----PYRFPGLAKLAARM 84 (276)
T ss_pred cCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCCC----cCcHHHHHHHHHHH
Confidence 478899997753 3345899999999999999999999999999999999999999986542 57899999999999
Q ss_pred HHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCC-CCchhHHHhHHhhhhhhccCCc-cchhhhhhh
Q 015903 201 VNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHA-NLPSTLSIFSNFLLGEIFSQDP-LRASDKALT 278 (398)
Q Consensus 201 l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 278 (398)
++.++.++++|+||||||.+++.+|.++|++|+++|+++++...... ..+......... ........ .........
T Consensus 85 i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 162 (276)
T TIGR02240 85 LDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASP--RRYIQPSHGIHIAPDIYG 162 (276)
T ss_pred HHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCc--hhhhccccccchhhhhcc
Confidence 99999999999999999999999999999999999999987643211 111111000000 00000000 000000000
Q ss_pred ccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHH
Q 015903 279 SCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFC 358 (398)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~ 358 (398)
.. ..........+............... +..... ........+|++|+|+|+|++|+++|++.++++.
T Consensus 163 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~ 230 (276)
T TIGR02240 163 GA--FRRDPELAMAHASKVRSGGKLGYYWQ-LFAGLG---------WTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLA 230 (276)
T ss_pred ce--eeccchhhhhhhhhcccCCCchHHHH-HHHHcC---------CchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHH
Confidence 00 00000000000000000011111110 000000 0001112567999999999999999999999999
Q ss_pred Hhc-CCcEEEcCCCCCcccccChHHHHHHHHHHHhhc
Q 015903 359 NDS-NHELIELPMAGHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 359 ~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
+.+ +.+++++++ ||+++.|+|+++++.|.+|+++.
T Consensus 231 ~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 231 WRIPNAELHIIDD-GHLFLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred HhCCCCEEEEEcC-CCchhhccHHHHHHHHHHHHHHh
Confidence 988 899999985 99999999999999999999875
No 7
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-32 Score=237.32 Aligned_cols=271 Identities=26% Similarity=0.361 Sum_probs=185.9
Q ss_pred cccccccccCCeEEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHH
Q 015903 114 DLGSASQADEIFRWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDE 192 (398)
Q Consensus 114 ~~~~~~~~~~g~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~ 192 (398)
.++...++.+|++++|.+.|++++|.|+++||++..+..|+.+++.|+. ||+|+++|+||+|.|+.+... ..|++..
T Consensus 21 ~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~--~~Yt~~~ 98 (322)
T KOG4178|consen 21 AISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHI--SEYTIDE 98 (322)
T ss_pred hcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCc--ceeeHHH
Confidence 3455566668899999999999999999999999999999999999999 899999999999999998874 3799999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCC-chhHHHhHHhhhhh--------
Q 015903 193 YVASLESFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANL-PSTLSIFSNFLLGE-------- 263 (398)
Q Consensus 193 ~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~-------- 263 (398)
++.|+..+++.++.++++++||+||+.+|+.+|..+|++|+++|+++.+...+.... ......+.......
T Consensus 99 l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~ 178 (322)
T KOG4178|consen 99 LVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKP 178 (322)
T ss_pred HHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcc
Confidence 999999999999999999999999999999999999999999999998765211000 00000000000000
Q ss_pred --hccCCccchhhhhhhc--------------cCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHH
Q 015903 264 --IFSQDPLRASDKALTS--------------CGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRT 327 (398)
Q Consensus 264 --~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (398)
.+...........+.. ..+....+++.+.+...+...+-.+. ++ +.+.+. ...+ ..
T Consensus 179 E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gp-lN-yyrn~~----r~w~--a~ 250 (322)
T KOG4178|consen 179 ETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGP-LN-YYRNFR----RNWE--AA 250 (322)
T ss_pred hhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcccccccccc-ch-hhHHHh----hCch--hc
Confidence 0000000000000000 00112333444444444432221111 00 111111 1110 00
Q ss_pred hhccCCCCCCEEEEeeCCCCccCchh-HHHHHHhc--CCcEEEcCCCCCcccccChHHHHHHHHHHHhhc
Q 015903 328 ILMDKSWKIPTTVCWGQRDRWLNNDG-VEDFCNDS--NHELIELPMAGHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 328 ~~~~~~i~~Pvlii~G~~D~~v~~~~-~~~l~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
.....+|++|+++|+|+.|.+.+... .+.+.+.+ -.+.++++|+||+++.|+|+++++.|.+|+++.
T Consensus 251 ~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 251 PWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 12335779999999999999988774 44444444 347889999999999999999999999999875
No 8
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=7.3e-32 Score=249.24 Aligned_cols=257 Identities=23% Similarity=0.313 Sum_probs=167.7
Q ss_pred EEEEEeccCC----CCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 015903 126 RWFCVESGNA----DNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFV 201 (398)
Q Consensus 126 ~l~~~~~g~~----~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l 201 (398)
+++|...|++ ++|+|||+||++++...|..+++.|.++|+|+++|+||||.|+.+... .++++++++++.+++
T Consensus 73 ~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~---~~~~~~~a~~l~~~l 149 (360)
T PLN02679 73 SINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGF---SYTMETWAELILDFL 149 (360)
T ss_pred eEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCc---cccHHHHHHHHHHHH
Confidence 8999988875 568999999999999999999999999999999999999999876432 578999999999999
Q ss_pred HHhCCCcEEEEEeCcChHHHHHHHHh-CCCccceEEEECCcCcccCCCC-chhHHHhHH---hhhhh----------hcc
Q 015903 202 NEIANDKVSLVVQGYFSPVVVKYASK-HKDKLKDLILLNPPLTAKHANL-PSTLSIFSN---FLLGE----------IFS 266 (398)
Q Consensus 202 ~~l~~~~v~lvG~S~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~---~~~~~----------~~~ 266 (398)
+.++.++++|+||||||.+++.++.. +|++|+++|++++......... ..+...... ..+.. ++.
T Consensus 150 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (360)
T PLN02679 150 EEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFN 229 (360)
T ss_pred HHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHH
Confidence 99999999999999999999998874 7999999999998643211110 111000000 00000 000
Q ss_pred CCc-cchhhhhhhcc--CCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhh-hHHHHHHHHHHhhccCCCCCCEEEEe
Q 015903 267 QDP-LRASDKALTSC--GPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKK-QLKQYVEEMRTILMDKSWKIPTTVCW 342 (398)
Q Consensus 267 ~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~Pvlii~ 342 (398)
... .......+... .+....++....+........ ....+...... ...... ....+|++|||+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~------~~l~~i~~PtLii~ 299 (360)
T PLN02679 230 RVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEG----ALDAFVSIVTGPPGPNPI------KLIPRISLPILVLW 299 (360)
T ss_pred HhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCC----hHHHHHHHHhcCCCCCHH------HHhhhcCCCEEEEE
Confidence 000 00000111000 011111111111111111100 00011110000 000001 11246799999999
Q ss_pred eCCCCccCchh-----HHHHHHhc-CCcEEEcCCCCCcccccChHHHHHHHHHHHhhcc
Q 015903 343 GQRDRWLNNDG-----VEDFCNDS-NHELIELPMAGHHVQEDSGEELGKVISEIFRKRR 395 (398)
Q Consensus 343 G~~D~~v~~~~-----~~~l~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 395 (398)
|++|.++|++. .+.+.+.+ +.++++++++||++++|+|+++++.|.+||++..
T Consensus 300 G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 300 GDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred eCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 99999999873 23455556 8999999999999999999999999999998754
No 9
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=2.1e-31 Score=238.70 Aligned_cols=260 Identities=16% Similarity=0.227 Sum_probs=173.7
Q ss_pred cccCCeEEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 015903 120 QADEIFRWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLES 199 (398)
Q Consensus 120 ~~~~g~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~ 199 (398)
++.+|++++|.+.|+.++|+|||+||++++...|..+.+.|+++|+|+++|+||||.|+.+... .++++++++|+.+
T Consensus 11 ~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~l~~ 87 (278)
T TIGR03056 11 VTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRF---RFTLPSMAEDLSA 87 (278)
T ss_pred eeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCcccc---CCCHHHHHHHHHH
Confidence 3458999999999887789999999999999999999999999999999999999999876542 5789999999999
Q ss_pred HHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhh-----hhhccC--Cccch
Q 015903 200 FVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLL-----GEIFSQ--DPLRA 272 (398)
Q Consensus 200 ~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~ 272 (398)
+++.++.++++|+||||||.+++.+|.++|++++++|++++..................... ...... .....
T Consensus 88 ~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (278)
T TIGR03056 88 LCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQR 167 (278)
T ss_pred HHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcc
Confidence 99999999999999999999999999999999999999988553221100000000000000 000000 00000
Q ss_pred hhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCch
Q 015903 273 SDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNND 352 (398)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~ 352 (398)
......... ..........+........ . .......+.. ...... .....++++|+++|+|++|.++|.+
T Consensus 168 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~---~~~~~~--~~~~~~i~~P~lii~g~~D~~vp~~ 237 (278)
T TIGR03056 168 VERLIRDTG-SLLDKAGMTYYGRLIRSPA---H-VDGALSMMAQ---WDLAPL--NRDLPRITIPLHLIAGEEDKAVPPD 237 (278)
T ss_pred hhHHhhccc-cccccchhhHHHHhhcCch---h-hhHHHHHhhc---ccccch--hhhcccCCCCEEEEEeCCCcccCHH
Confidence 000000000 0000000000000000000 0 0000000000 000000 1123567999999999999999999
Q ss_pred hHHHHHHhc-CCcEEEcCCCCCcccccChHHHHHHHHHHHh
Q 015903 353 GVEDFCNDS-NHELIELPMAGHHVQEDSGEELGKVISEIFR 392 (398)
Q Consensus 353 ~~~~l~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 392 (398)
..+.+.+.+ +.++++++++||+++.|+|+++++.|.+|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 238 ESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred HHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 999999888 8999999999999999999999999999985
No 10
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=5.4e-31 Score=243.14 Aligned_cols=259 Identities=15% Similarity=0.185 Sum_probs=168.1
Q ss_pred cCCeEEEEEeccCC---CCCEEEEecCCCCCccc-hhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 015903 122 DEIFRWFCVESGNA---DNHTVLLIHGFPSQAYS-YRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVAS 196 (398)
Q Consensus 122 ~~g~~l~~~~~g~~---~~p~vvllHG~~~~~~~-~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~d 196 (398)
.+|.+++|..+++. .+++|||+||++++... |..+++.|++ ||+|+++|+||||.|+.... +..+++++++|
T Consensus 69 ~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~---~~~~~~~~~~d 145 (349)
T PLN02385 69 SRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG---YIPSFDDLVDD 145 (349)
T ss_pred CCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC---CcCCHHHHHHH
Confidence 68999999988753 35789999999988664 6888899987 99999999999999986532 24588999999
Q ss_pred HHHHHHHhCCC------cEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCc-hhHHHhHHhhhhhhccCCc
Q 015903 197 LESFVNEIAND------KVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLP-STLSIFSNFLLGEIFSQDP 269 (398)
Q Consensus 197 l~~~l~~l~~~------~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 269 (398)
+.++++.++.+ +++|+||||||.+++.++.++|++++++|+++|.........+ .....+.... ........
T Consensus 146 v~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~ 224 (349)
T PLN02385 146 VIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILL-ANLLPKAK 224 (349)
T ss_pred HHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHH-HHHCCCce
Confidence 99999887543 7999999999999999999999999999999986543221111 1111111111 11111000
Q ss_pred cchhhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCcc
Q 015903 270 LRASDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWL 349 (398)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v 349 (398)
.............. ........+..... ..... .......+.. ..... ....++++|+|+|+|++|.++
T Consensus 225 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~--~~~~~~~l~~-----~~~~~--~~l~~i~~P~Lii~G~~D~vv 293 (349)
T PLN02385 225 LVPQKDLAELAFRD-LKKRKMAEYNVIAY-KDKPR--LRTAVELLRT-----TQEIE--MQLEEVSLPLLILHGEADKVT 293 (349)
T ss_pred ecCCCccccccccC-HHHHHHhhcCccee-CCCcc--hHHHHHHHHH-----HHHHH--HhcccCCCCEEEEEeCCCCcc
Confidence 00000000000000 00000000000000 00000 0001111100 01111 123567999999999999999
Q ss_pred CchhHHHHHHhc---CCcEEEcCCCCCcccccChHH----HHHHHHHHHhhcc
Q 015903 350 NNDGVEDFCNDS---NHELIELPMAGHHVQEDSGEE----LGKVISEIFRKRR 395 (398)
Q Consensus 350 ~~~~~~~l~~~~---~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~~~ 395 (398)
|++.++.+++.+ +.++++++++||.++.|+|++ +++.|.+||+++.
T Consensus 294 ~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 294 DPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred ChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 999999999887 589999999999999998876 8889999998764
No 11
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.97 E-value=1.7e-30 Score=233.40 Aligned_cols=257 Identities=17% Similarity=0.219 Sum_probs=159.6
Q ss_pred CeEEEEEeccCCCCCEEEEecCCCCCccchhhh---hHhhh-cCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 015903 124 IFRWFCVESGNADNHTVLLIHGFPSQAYSYRKV---LPVLS-KNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLES 199 (398)
Q Consensus 124 g~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~---~~~L~-~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~ 199 (398)
|++++|...|+ +|+|||+||++.+...|..+ +..|. ++|+|+++|+||||.|+..... ......+++++.+
T Consensus 19 ~~~~~y~~~g~--~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~l~~ 93 (282)
T TIGR03343 19 NFRIHYNEAGN--GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMD---EQRGLVNARAVKG 93 (282)
T ss_pred ceeEEEEecCC--CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCc---ccccchhHHHHHH
Confidence 56799998774 68999999999888777543 34444 4899999999999999865321 1112256899999
Q ss_pred HHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhc
Q 015903 200 FVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTS 279 (398)
Q Consensus 200 ~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (398)
+++.++.++++++||||||.+++.+|.++|++++++|++++.........+....... .... .+...........+..
T Consensus 94 ~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~ 171 (282)
T TIGR03343 94 LMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIK-LLFK-LYAEPSYETLKQMLNV 171 (282)
T ss_pred HHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHH-HHHH-HhcCCCHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999753211100000000000 0000 0000000000001000
Q ss_pred --cCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHH
Q 015903 280 --CGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDF 357 (398)
Q Consensus 280 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l 357 (398)
..+................. ... ....+....... ............+|++|+|+|+|++|.+++++.++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~ 245 (282)
T TIGR03343 172 FLFDQSLITEELLQGRWENIQR--QPE-HLKNFLISSQKA---PLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKL 245 (282)
T ss_pred CccCcccCcHHHHHhHHHHhhc--CHH-HHHHHHHhcccc---ccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHH
Confidence 00101111110000000000 000 000000000000 0000000112246799999999999999999999999
Q ss_pred HHhc-CCcEEEcCCCCCcccccChHHHHHHHHHHHhh
Q 015903 358 CNDS-NHELIELPMAGHHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 358 ~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 393 (398)
.+.+ ++++++++++||+++.|+|+++.+.|.+||+.
T Consensus 246 ~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 246 LWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred HHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 9998 99999999999999999999999999999963
No 12
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.97 E-value=3e-30 Score=241.62 Aligned_cols=264 Identities=19% Similarity=0.244 Sum_probs=168.3
Q ss_pred cCCeEEEEEeccCCC---CCEEEEecCCCCCccchhh-hhHhhh----cCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHH
Q 015903 122 DEIFRWFCVESGNAD---NHTVLLIHGFPSQAYSYRK-VLPVLS----KNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEY 193 (398)
Q Consensus 122 ~~g~~l~~~~~g~~~---~p~vvllHG~~~~~~~~~~-~~~~L~----~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 193 (398)
.++.+++|...|+.+ +|+|||+||++++...|.. +++.|. ++|+|+++|+||||.|+.+... .++++++
T Consensus 183 ~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~---~ytl~~~ 259 (481)
T PLN03087 183 SSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADS---LYTLREH 259 (481)
T ss_pred eCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCC---cCCHHHH
Confidence 467899999988754 4799999999999999975 446665 4999999999999999876432 5889999
Q ss_pred HHHHH-HHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhh-hhhccCCccc
Q 015903 194 VASLE-SFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLL-GEIFSQDPLR 271 (398)
Q Consensus 194 ~~dl~-~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 271 (398)
++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++.......... ......... ..........
T Consensus 260 a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 338 (481)
T PLN03087 260 LEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQA-TQYVMRKVAPRRVWPPIAFG 338 (481)
T ss_pred HHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhH-HHHHHHHhcccccCCccccc
Confidence 99995 89999999999999999999999999999999999999999865432111100 000000000 0000000000
Q ss_pred h-hhhhhhccCCCC-----CChhhhhhhhcccccCCCchhHHH------------HHHHhhhh---hHHHHHHHHHHhhc
Q 015903 272 A-SDKALTSCGPYQ-----MKEDDAMVYRSPYLSSGSSGFALT------------AISKGMKK---QLKQYVEEMRTILM 330 (398)
Q Consensus 272 ~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~---~~~~~~~~~~~~~~ 330 (398)
. ...+........ ........................ .+...... .....+..+.
T Consensus 339 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~---- 414 (481)
T PLN03087 339 ASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVR---- 414 (481)
T ss_pred hhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHH----
Confidence 0 000000000000 000000000000000000000000 00000000 0001111111
Q ss_pred cCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCcEEEcCCCCCcccc-cChHHHHHHHHHHHhhc
Q 015903 331 DKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELIELPMAGHHVQE-DSGEELGKVISEIFRKR 394 (398)
Q Consensus 331 ~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 394 (398)
.+|++|+|+|+|++|.++|++..+.+.+.+ ++++++++++||+++. |+|+++++.|.+|.+..
T Consensus 415 -~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 415 -DQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred -HhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 356999999999999999999999999999 9999999999999885 99999999999998754
No 13
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=1.9e-30 Score=223.73 Aligned_cols=286 Identities=22% Similarity=0.297 Sum_probs=180.4
Q ss_pred hccceEEEeecCCCCcccCCCCccccccccccccCCeEEEEEec--cCCCCCEEEEecCCCCCccchhhhhHhhhcCCeE
Q 015903 89 KQGKIVKAVTVSGSGETAKDPIFGLDLGSASQADEIFRWFCVES--GNADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHA 166 (398)
Q Consensus 89 ~~~~~~~~~p~~~~~~~~~~~~~G~~~~~~~~~~~g~~l~~~~~--g~~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~V 166 (398)
.+.+.+...+..+....+..+ ++..+..... .+.+++++|+|||+|++...|-.-++.|++.++|
T Consensus 53 ~e~ril~~~~v~~~~~~v~i~-------------~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~~~~v 119 (365)
T KOG4409|consen 53 AEKRILSSVPVPYSKKYVRIP-------------NGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAKIRNV 119 (365)
T ss_pred HHHhhhhhcCCCcceeeeecC-------------CCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhhcCce
Confidence 345566666666665444322 2223333322 3356789999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccC
Q 015903 167 IAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKH 246 (398)
Q Consensus 167 i~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 246 (398)
+++|++|+|+|+++.-..........+++-|+++....++++.+|+|||+||+++..||.++|++|+.|||++|......
T Consensus 120 yaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~ 199 (365)
T KOG4409|consen 120 YAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEK 199 (365)
T ss_pred EEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccC
Confidence 99999999999998765544556678999999999999999999999999999999999999999999999999776553
Q ss_pred C-CCchh---HHHhHHhhhhhhccCCccchhhhhhhccCC---------------CCCChhhhhhhhc-ccccCCCchhH
Q 015903 247 A-NLPST---LSIFSNFLLGEIFSQDPLRASDKALTSCGP---------------YQMKEDDAMVYRS-PYLSSGSSGFA 306 (398)
Q Consensus 247 ~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~-~~~~~~~~~~~ 306 (398)
. ..+.. ...+...........+++..+ +.+...++ ....++....|.- ...........
T Consensus 200 ~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~L-R~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~ 278 (365)
T KOG4409|consen 200 PDSEPEFTKPPPEWYKALFLVATNFNPLALL-RLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETA 278 (365)
T ss_pred CCcchhhcCCChHHHhhhhhhhhcCCHHHHH-HhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHH
Confidence 2 11110 011111111111111111111 11111111 1111111011111 11111122222
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc---CCcEEEcCCCCCcccccChHHH
Q 015903 307 LTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS---NHELIELPMAGHHVQEDSGEEL 383 (398)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~i~~~gH~~~~e~p~~~ 383 (398)
+..+.......-......+..+ +-+||+++|+|++|.+ +.....++.+.+ .++.++++++||+++.|+|+.|
T Consensus 279 fk~l~~~~g~Ar~Pm~~r~~~l----~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~F 353 (365)
T KOG4409|consen 279 FKNLFEPGGWARRPMIQRLREL----KKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFF 353 (365)
T ss_pred HHHHHhccchhhhhHHHHHHhh----ccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHHHH
Confidence 2222222111112222222222 1169999999999965 555555555543 7999999999999999999999
Q ss_pred HHHHHHHHhh
Q 015903 384 GKVISEIFRK 393 (398)
Q Consensus 384 ~~~i~~fl~~ 393 (398)
++.+.+++++
T Consensus 354 n~~v~~~~~~ 363 (365)
T KOG4409|consen 354 NQIVLEECDK 363 (365)
T ss_pred HHHHHHHHhc
Confidence 9999999875
No 14
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.97 E-value=1.7e-30 Score=229.94 Aligned_cols=248 Identities=16% Similarity=0.165 Sum_probs=156.7
Q ss_pred EEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 015903 126 RWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIA 205 (398)
Q Consensus 126 ~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~ 205 (398)
.++|...|++ .|+|||+||++++...|..+++.|.+.|+|+++|+||||.|.... .++.+++++++.+ +.
T Consensus 3 ~~~y~~~G~g-~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~-----~~~~~~~~~~l~~----~~ 72 (256)
T PRK10349 3 NIWWQTKGQG-NVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFG-----ALSLADMAEAVLQ----QA 72 (256)
T ss_pred ccchhhcCCC-CCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCC-----CCCHHHHHHHHHh----cC
Confidence 3567777752 357999999999999999999999999999999999999997543 3677877777653 46
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCC-CCchhHHHhHHhhhhhhccCCccchhhhhhhc--cCC
Q 015903 206 NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHA-NLPSTLSIFSNFLLGEIFSQDPLRASDKALTS--CGP 282 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 282 (398)
.++++++||||||.+++.+|.++|++|+++|++++....... ..+.........+... ...........++.. ...
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 151 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQ-LSDDFQRTVERFLALQTMGT 151 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHH-HHhchHHHHHHHHHHHHccC
Confidence 789999999999999999999999999999999875332110 1111110110000000 000000011111110 000
Q ss_pred CCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-
Q 015903 283 YQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS- 361 (398)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~- 361 (398)
...... ...+.............. +...+ .............++++|||+|+|++|.++|.+.++.+.+.+
T Consensus 152 ~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~ 223 (256)
T PRK10349 152 ETARQD-ARALKKTVLALPMPEVDV--LNGGL-----EILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP 223 (256)
T ss_pred chHHHH-HHHHHHHhhccCCCcHHH--HHHHH-----HHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC
Confidence 000000 001111000000000000 00000 000000001122466999999999999999999999888888
Q ss_pred CCcEEEcCCCCCcccccChHHHHHHHHHHHh
Q 015903 362 NHELIELPMAGHHVQEDSGEELGKVISEIFR 392 (398)
Q Consensus 362 ~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 392 (398)
++++++++++||++++|+|++|++.|.+|-.
T Consensus 224 ~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 224 HSESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CCeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999854
No 15
>PLN02965 Probable pheophorbidase
Probab=99.97 E-value=2.1e-30 Score=228.98 Aligned_cols=242 Identities=15% Similarity=0.172 Sum_probs=156.4
Q ss_pred EEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CcEEEEEeCc
Q 015903 139 TVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIAN-DKVSLVVQGY 216 (398)
Q Consensus 139 ~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-~~v~lvG~S~ 216 (398)
+|||+||++.+.+.|..+++.|.+ +|+|+++|+||||.|..+... .++.+++++|+.++++.++. ++++++||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~---~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNT---VSSSDQYNRPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccc---cCCHHHHHHHHHHHHHhcCCCCCEEEEecCc
Confidence 599999999999999999999954 999999999999999765432 57899999999999999987 4999999999
Q ss_pred ChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhh--hhhh-ccCCccchhhhhhhccCCCCCChhhhhhh
Q 015903 217 FSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFL--LGEI-FSQDPLRASDKALTSCGPYQMKEDDAMVY 293 (398)
Q Consensus 217 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (398)
||.+++.+|.++|++|+++|++++.................... .... +......... .........
T Consensus 82 GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~--- 151 (255)
T PLN02965 82 GGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPT-------GIMMKPEFV--- 151 (255)
T ss_pred chHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcc-------hhhcCHHHH---
Confidence 99999999999999999999999853211110000000000000 0000 0000000000 000000000
Q ss_pred hcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHh-hccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCcEEEcCCC
Q 015903 294 RSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTI-LMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELIELPMA 371 (398)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~~ 371 (398)
...+....... ........+.............. ....++++|+++|+|++|..+|++..+.+.+.+ ++++++++++
T Consensus 152 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~ 230 (255)
T PLN02965 152 RHYYYNQSPLE-DYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDS 230 (255)
T ss_pred HHHHhcCCCHH-HHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCC
Confidence 00000000000 00000000000000000000000 022357999999999999999999999999999 8999999999
Q ss_pred CCcccccChHHHHHHHHHHHhhc
Q 015903 372 GHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 372 gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
||+++.|+|++|++.|.+|++..
T Consensus 231 GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 231 DHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred CCchhhcCHHHHHHHHHHHHHHh
Confidence 99999999999999999999864
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=3.2e-30 Score=228.13 Aligned_cols=241 Identities=12% Similarity=0.184 Sum_probs=162.2
Q ss_pred cCCCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEE
Q 015903 133 GNADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLV 212 (398)
Q Consensus 133 g~~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lv 212 (398)
++.++|+|||+||++++...|..++..|.++|+|+++|+||||.|.... .++++++++|+.++++.++.++++++
T Consensus 12 ~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~-----~~~~~~~~~d~~~~l~~l~~~~~~lv 86 (255)
T PRK10673 12 NPHNNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDP-----VMNYPAMAQDLLDTLDALQIEKATFI 86 (255)
T ss_pred CCCCCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCC-----CCCHHHHHHHHHHHHHHcCCCceEEE
Confidence 3456799999999999999999999999999999999999999998654 47899999999999999999999999
Q ss_pred EeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccc--hhhhhhhccCCCCCChhhh
Q 015903 213 VQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLR--ASDKALTSCGPYQMKEDDA 290 (398)
Q Consensus 213 G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 290 (398)
||||||.+++.+|.++|++|+++|++++....... ......... ........... .....+.. .......
T Consensus 87 GhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 158 (255)
T PRK10673 87 GHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHV---RRHDEIFAA-INAVSEAGATTRQQAAAIMRQ----HLNEEGV 158 (255)
T ss_pred EECHHHHHHHHHHHhCHhhcceEEEEecCCCCccc---hhhHHHHHH-HHHhhhcccccHHHHHHHHHH----hcCCHHH
Confidence 99999999999999999999999999753322110 000000000 00000000000 00000000 0000000
Q ss_pred hhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCcEEEcC
Q 015903 291 MVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELIELP 369 (398)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~i~ 369 (398)
..+...........+.... ...............++++|+|+|+|++|..++.+..+.+.+.+ +.++++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~ 230 (255)
T PRK10673 159 IQFLLKSFVDGEWRFNVPV--------LWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIA 230 (255)
T ss_pred HHHHHhcCCcceeEeeHHH--------HHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeC
Confidence 0000000000000000000 00111111111233567999999999999999999999999988 99999999
Q ss_pred CCCCcccccChHHHHHHHHHHHhhc
Q 015903 370 MAGHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 370 ~~gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
++||+++.|+|+++.+.|.+||+++
T Consensus 231 ~~gH~~~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 231 GAGHWVHAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred CCCCeeeccCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999863
No 17
>PLN02578 hydrolase
Probab=99.97 E-value=1.2e-29 Score=234.26 Aligned_cols=259 Identities=20% Similarity=0.288 Sum_probs=169.0
Q ss_pred cCCeEEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 015903 122 DEIFRWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFV 201 (398)
Q Consensus 122 ~~g~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l 201 (398)
.+|.+++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.|+.+.. .++.+++++++.+++
T Consensus 73 ~~~~~i~Y~~~g~--g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~----~~~~~~~a~~l~~~i 146 (354)
T PLN02578 73 WRGHKIHYVVQGE--GLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALI----EYDAMVWRDQVADFV 146 (354)
T ss_pred ECCEEEEEEEcCC--CCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCccc----ccCHHHHHHHHHHHH
Confidence 3678899998774 6889999999999999999999999999999999999999987653 578999999999999
Q ss_pred HHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCC--c-------hhHHH-hHHh---hhhhhc---
Q 015903 202 NEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANL--P-------STLSI-FSNF---LLGEIF--- 265 (398)
Q Consensus 202 ~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~-------~~~~~-~~~~---~~~~~~--- 265 (398)
+.+..++++++|||+||.+++.+|.++|++|+++|++++......... . ..... +... ......
T Consensus 147 ~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (354)
T PLN02578 147 KEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGF 226 (354)
T ss_pred HHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHH
Confidence 999989999999999999999999999999999999987543221110 0 00000 0000 000000
Q ss_pred --cC-Cccchhhhhhhc-c-CCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEE
Q 015903 266 --SQ-DPLRASDKALTS-C-GPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTV 340 (398)
Q Consensus 266 --~~-~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvli 340 (398)
.. ............ . ............+................+...+.... . .... ....++++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~--~~l~~i~~PvLi 301 (354)
T PLN02578 227 LFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQS-R--YTLD--SLLSKLSCPLLL 301 (354)
T ss_pred HHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCC-C--CCHH--HHhhcCCCCEEE
Confidence 00 000000000000 0 00001111111111111000000000000000000000 0 0000 112467999999
Q ss_pred EeeCCCCccCchhHHHHHHhc-CCcEEEcCCCCCcccccChHHHHHHHHHHHh
Q 015903 341 CWGQRDRWLNNDGVEDFCNDS-NHELIELPMAGHHVQEDSGEELGKVISEIFR 392 (398)
Q Consensus 341 i~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 392 (398)
|+|++|.+++.+.++++.+.+ +.+++++ ++||+++.|+|+++++.|.+|++
T Consensus 302 I~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 302 LWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred EEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 999999999999999999988 8899999 48999999999999999999986
No 18
>PRK06489 hypothetical protein; Provisional
Probab=99.97 E-value=7.2e-30 Score=236.40 Aligned_cols=266 Identities=14% Similarity=0.098 Sum_probs=163.3
Q ss_pred CCeEEEEEeccCCC-------CCEEEEecCCCCCccchh--hhhHhh--------hcCCeEEEEcCCCCCCCCCCCCCC-
Q 015903 123 EIFRWFCVESGNAD-------NHTVLLIHGFPSQAYSYR--KVLPVL--------SKNYHAIAFDWLGFGFSEKPQPGY- 184 (398)
Q Consensus 123 ~g~~l~~~~~g~~~-------~p~vvllHG~~~~~~~~~--~~~~~L--------~~g~~Vi~~D~rG~G~S~~~~~~~- 184 (398)
+|++++|...|+++ +|+|||+||++++...|. .+.+.| +++|+||++|+||||.|+.+....
T Consensus 48 ~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~ 127 (360)
T PRK06489 48 PELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLR 127 (360)
T ss_pred CCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCC
Confidence 88999999999765 789999999999888775 444443 568999999999999998654311
Q ss_pred --CCCCCHHHHHHHHHHHH-HHhCCCcEE-EEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhh
Q 015903 185 --GFDYTLDEYVASLESFV-NEIANDKVS-LVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFL 260 (398)
Q Consensus 185 --~~~~~~~~~~~dl~~~l-~~l~~~~v~-lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 260 (398)
...++++++++++.+++ +++++++++ ++||||||++|+.+|.++|++|+++|++++....... ............
T Consensus 128 ~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~-~~~~~~~~~~~~ 206 (360)
T PRK06489 128 AAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSG-RNWMWRRMLIES 206 (360)
T ss_pred CCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccH-HHHHHHHHHHHH
Confidence 01478999999988854 889999985 8999999999999999999999999999875321100 000000000000
Q ss_pred hhhhcc---CC---ccchhhhhhhc----cCC-------CCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHH
Q 015903 261 LGEIFS---QD---PLRASDKALTS----CGP-------YQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVE 323 (398)
Q Consensus 261 ~~~~~~---~~---~~~~~~~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (398)
...... .. ........... ... ..........+........... ....+...+. ...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~ 280 (360)
T PRK06489 207 IRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTA-DANDFLYQWD-----SSR 280 (360)
T ss_pred HHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhc-CHHHHHHHHH-----Hhh
Confidence 000000 00 00000000000 000 0000000000000000000000 0000000000 000
Q ss_pred HHHHhhccCCCCCCEEEEeeCCCCccCchhH--HHHHHhc-CCcEEEcCCC----CCcccccChHHHHHHHHHHHhhccc
Q 015903 324 EMRTILMDKSWKIPTTVCWGQRDRWLNNDGV--EDFCNDS-NHELIELPMA----GHHVQEDSGEELGKVISEIFRKRRL 396 (398)
Q Consensus 324 ~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~--~~l~~~~-~~~~~~i~~~----gH~~~~e~p~~~~~~i~~fl~~~~~ 396 (398)
.........+|++|||+|+|++|.++|++.+ +.+.+.+ +.++++++++ ||.++ |+|++|++.|.+||++..+
T Consensus 281 ~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 281 DYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred ccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhccc
Confidence 0000112356799999999999999999875 7888888 9999999996 99997 8999999999999987653
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=5.7e-30 Score=226.38 Aligned_cols=250 Identities=15% Similarity=0.167 Sum_probs=164.2
Q ss_pred EEEeccC--CCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 015903 128 FCVESGN--ADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIA 205 (398)
Q Consensus 128 ~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~ 205 (398)
+|...|+ .++|+||++||++++...|..+++.|.++|+|+++|+||||.|...... .++.+++++++.++++.++
T Consensus 2 ~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~~~~~i~~~~ 78 (257)
T TIGR03611 2 HYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPP---GYSIAHMADDVLQLLDALN 78 (257)
T ss_pred EEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcc---cCCHHHHHHHHHHHHHHhC
Confidence 4555564 4578999999999999999999999988999999999999999865432 5789999999999999999
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCC
Q 015903 206 NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQM 285 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (398)
.++++++||||||.+++.+|.++|++++++|++++........ ....... ..++... ............ .......
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~-~~~~~~~-~~~~~~~-~~~~~~~~~~~~-~~~~~~~ 154 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHT-RRCFDVR-IALLQHA-GPEAYVHAQALF-LYPADWI 154 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhH-HHHHHHH-HHHHhcc-Ccchhhhhhhhh-hccccHh
Confidence 9999999999999999999999999999999998754332100 0000000 0000000 000000000000 0000000
Q ss_pred Ch---hhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-
Q 015903 286 KE---DDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS- 361 (398)
Q Consensus 286 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~- 361 (398)
.. ......................+......+ ......++++|+++++|++|.++|++.++++.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 225 (257)
T TIGR03611 155 SENAARLAADEAHALAHFPGKANVLRRINALEAFD---------VSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP 225 (257)
T ss_pred hccchhhhhhhhhcccccCccHHHHHHHHHHHcCC---------cHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC
Confidence 00 000000000000000000000000000000 01123567999999999999999999999999988
Q ss_pred CCcEEEcCCCCCcccccChHHHHHHHHHHHhh
Q 015903 362 NHELIELPMAGHHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 362 ~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 393 (398)
+.+++.++++||+++.++|+++.+.|.+||++
T Consensus 226 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 226 NAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred CceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 89999999999999999999999999999963
No 20
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=6e-29 Score=222.56 Aligned_cols=253 Identities=17% Similarity=0.233 Sum_probs=163.8
Q ss_pred ccCCeEEEEEeccCC--CCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 015903 121 ADEIFRWFCVESGNA--DNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASL 197 (398)
Q Consensus 121 ~~~g~~l~~~~~g~~--~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl 197 (398)
..+|.+++|..+.+. .++.|+++||+++++..|..+++.|++ ||+|+++|+||||.|..... ...++.++.+|+
T Consensus 7 ~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~---~~~~~~~~~~d~ 83 (276)
T PHA02857 7 NLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKM---MIDDFGVYVRDV 83 (276)
T ss_pred cCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccC---CcCCHHHHHHHH
Confidence 358888888776542 245677779999999999999999987 99999999999999975432 134667777787
Q ss_pred HHHHHHh----CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchh
Q 015903 198 ESFVNEI----ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRAS 273 (398)
Q Consensus 198 ~~~l~~l----~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (398)
.+.++.+ ..++++++||||||.+++.+|.++|++++++|+++|...... . .....+........+.......
T Consensus 84 ~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~- 159 (276)
T PHA02857 84 VQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEA--V-PRLNLLAAKLMGIFYPNKIVGK- 159 (276)
T ss_pred HHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccc--c-cHHHHHHHHHHHHhCCCCccCC-
Confidence 7777654 346899999999999999999999999999999998654221 1 1111111111111111100000
Q ss_pred hhhhhccCCCCCChh--hhhhh-hcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccC
Q 015903 274 DKALTSCGPYQMKED--DAMVY-RSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLN 350 (398)
Q Consensus 274 ~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~ 350 (398)
..+...... ....+ ............. +...+ ........ ....++++|+|+|+|++|.++|
T Consensus 160 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~--~~l~~i~~Pvliv~G~~D~i~~ 224 (276)
T PHA02857 160 ------LCPESVSRDMDEVYKYQYDPLVNHEKIKAG---FASQV----LKATNKVR--KIIPKIKTPILILQGTNNEISD 224 (276)
T ss_pred ------CCHhhccCCHHHHHHHhcCCCccCCCccHH---HHHHH----HHHHHHHH--HhcccCCCCEEEEecCCCCcCC
Confidence 000000000 00001 1111100000000 00000 00111111 1235679999999999999999
Q ss_pred chhHHHHHHhc--CCcEEEcCCCCCcccccCh---HHHHHHHHHHHhhcc
Q 015903 351 NDGVEDFCNDS--NHELIELPMAGHHVQEDSG---EELGKVISEIFRKRR 395 (398)
Q Consensus 351 ~~~~~~l~~~~--~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~~ 395 (398)
++.++++.+.+ ++++++++++||.++.|.+ +++.+.|.+||+++.
T Consensus 225 ~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 225 VSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred hHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 99999999987 6899999999999998865 679999999999864
No 21
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=9e-29 Score=226.99 Aligned_cols=257 Identities=13% Similarity=0.159 Sum_probs=162.0
Q ss_pred cCCeEEEEEeccCC----CCCEEEEecCCCCCc-cchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 015903 122 DEIFRWFCVESGNA----DNHTVLLIHGFPSQA-YSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVA 195 (398)
Q Consensus 122 ~~g~~l~~~~~g~~----~~p~vvllHG~~~~~-~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 195 (398)
.+|.+++|..+++. .+++|||+||++.+. +.|..+...|.+ ||+|+++|+||||.|..... ...+.+++++
T Consensus 40 ~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~---~~~~~~~~~~ 116 (330)
T PLN02298 40 PRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA---YVPNVDLVVE 116 (330)
T ss_pred CCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc---cCCCHHHHHH
Confidence 58889999876532 246799999998654 456777778876 99999999999999975432 2467899999
Q ss_pred HHHHHHHHhCC------CcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchh-HHHhHHhhhhhhccCC
Q 015903 196 SLESFVNEIAN------DKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPST-LSIFSNFLLGEIFSQD 268 (398)
Q Consensus 196 dl~~~l~~l~~------~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 268 (398)
|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|+++|.........+.+ ..... .....+....
T Consensus 117 D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 195 (330)
T PLN02298 117 DCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQIL-TFVARFLPTL 195 (330)
T ss_pred HHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHH-HHHHHHCCCC
Confidence 99999998753 3699999999999999999999999999999998654332111111 11110 0111111110
Q ss_pred ccchhhhhhhccCCCCCChhhhhhh--hcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCC
Q 015903 269 PLRASDKALTSCGPYQMKEDDAMVY--RSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRD 346 (398)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D 346 (398)
........+. ..........+ ............ ..+... ........ ....++++|+|+|+|++|
T Consensus 196 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~--~~l~~i~~PvLii~G~~D 262 (330)
T PLN02298 196 AIVPTADLLE----KSVKVPAKKIIAKRNPMRYNGKPRL--GTVVEL-----LRVTDYLG--KKLKDVSIPFIVLHGSAD 262 (330)
T ss_pred ccccCCCccc----ccccCHHHHHHHHhCccccCCCccH--HHHHHH-----HHHHHHHH--HhhhhcCCCEEEEecCCC
Confidence 0000000000 00000000000 000000000000 001110 00111111 122466999999999999
Q ss_pred CccCchhHHHHHHhc---CCcEEEcCCCCCcccccChH----HHHHHHHHHHhhcc
Q 015903 347 RWLNNDGVEDFCNDS---NHELIELPMAGHHVQEDSGE----ELGKVISEIFRKRR 395 (398)
Q Consensus 347 ~~v~~~~~~~l~~~~---~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~~~ 395 (398)
.++|++.++.+++.+ ++++++++++||.++.++|+ ++.+.|.+||+++.
T Consensus 263 ~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 263 VVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERC 318 (330)
T ss_pred CCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999998876 68999999999999988775 47778899998753
No 22
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=1.6e-28 Score=224.73 Aligned_cols=265 Identities=14% Similarity=0.142 Sum_probs=167.3
Q ss_pred cCCeEEEEEeccC-CCCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCC--CCCCCCCHHHHHHHH
Q 015903 122 DEIFRWFCVESGN-ADNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQP--GYGFDYTLDEYVASL 197 (398)
Q Consensus 122 ~~g~~l~~~~~g~-~~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~--~~~~~~~~~~~~~dl 197 (398)
.+|++++|..+++ ..+++||++||++++...|..++..|.+ ||+|+++|+||||.|+.... ..+...+++++++|+
T Consensus 38 ~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~ 117 (330)
T PRK10749 38 VDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDL 117 (330)
T ss_pred CCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHH
Confidence 4888999999875 3467999999999998899999877765 99999999999999976532 122346899999999
Q ss_pred HHHHHHh----CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhH-HHhHHhhhhhh-ccCCccc
Q 015903 198 ESFVNEI----ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTL-SIFSNFLLGEI-FSQDPLR 271 (398)
Q Consensus 198 ~~~l~~l----~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~ 271 (398)
..+++.+ +..+++++||||||.+++.+|.++|++++++|+++|....... .+... ..+........ .......
T Consensus 118 ~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (330)
T PRK10749 118 AAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLP-LPSWMARRILNWAEGHPRIRDGYAI 196 (330)
T ss_pred HHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCC-CCcHHHHHHHHHHHHhcCCCCcCCC
Confidence 9999886 5679999999999999999999999999999999986543211 11111 11111100000 0000000
Q ss_pred hhhhhhhc-cCCCCC--ChhhhhhhhcccccCCCc---hhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCC
Q 015903 272 ASDKALTS-CGPYQM--KEDDAMVYRSPYLSSGSS---GFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQR 345 (398)
Q Consensus 272 ~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~ 345 (398)
........ .....+ ..+....+.+.+...... ......+...+ .....+ .....++++|+|+|+|++
T Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~i~~P~Lii~G~~ 269 (330)
T PRK10749 197 GTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESI-----LAGEQV--LAGAGDITTPLLLLQAEE 269 (330)
T ss_pred CCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHH-----HHHHHH--HhhccCCCCCEEEEEeCC
Confidence 00000000 000000 000000011111101000 00111011100 000011 122357799999999999
Q ss_pred CCccCchhHHHHHHhc--------CCcEEEcCCCCCcccccCh---HHHHHHHHHHHhhc
Q 015903 346 DRWLNNDGVEDFCNDS--------NHELIELPMAGHHVQEDSG---EELGKVISEIFRKR 394 (398)
Q Consensus 346 D~~v~~~~~~~l~~~~--------~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 394 (398)
|.+++++.++.+++.+ ++++++++|+||.++.|.+ +++.+.|.+||+++
T Consensus 270 D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 270 ERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 9999999988887755 3479999999999998765 67899999999875
No 23
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=3.2e-29 Score=220.35 Aligned_cols=245 Identities=15% Similarity=0.228 Sum_probs=163.6
Q ss_pred EEEEeccCC-CCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 015903 127 WFCVESGNA-DNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIA 205 (398)
Q Consensus 127 l~~~~~g~~-~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~ 205 (398)
++|...|++ ++|+||++||++.+...|..+++.|.++|+|+++|+||||.|..... .++.+++++|+.++++.++
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~----~~~~~~~~~~~~~~i~~~~ 77 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEG----PYSIEDLADDVLALLDHLG 77 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCCC----CCCHHHHHHHHHHHHHHhC
Confidence 566667765 57899999999999999999999998899999999999999976543 5789999999999999999
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhcc-CCCC
Q 015903 206 NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSC-GPYQ 284 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 284 (398)
.++++++|||+||++++.+|.++|++++++|++++....... ..+...... ... ..........+... ....
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~--~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~ 150 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTP--ESWNARIAA-VRA----EGLAALADAVLERWFTPGF 150 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCch--hhHHHHHhh-hhh----ccHHHHHHHHHHHHccccc
Confidence 999999999999999999999999999999999875432210 001000000 000 00000000000000 0000
Q ss_pred C--ChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-
Q 015903 285 M--KEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS- 361 (398)
Q Consensus 285 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~- 361 (398)
. .......+........... +.. ...............++++|+++++|++|.++|.+..+.+.+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~ 220 (251)
T TIGR02427 151 REAHPARLDLYRNMLVRQPPDG-----YAG-----CCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP 220 (251)
T ss_pred ccCChHHHHHHHHHHHhcCHHH-----HHH-----HHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC
Confidence 0 0000000000000000000 000 00000000001122466999999999999999999999998888
Q ss_pred CCcEEEcCCCCCcccccChHHHHHHHHHHHh
Q 015903 362 NHELIELPMAGHHVQEDSGEELGKVISEIFR 392 (398)
Q Consensus 362 ~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 392 (398)
+.++++++++||+++.++|+++.+.|.+|++
T Consensus 221 ~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 221 GARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 8899999999999999999999999999984
No 24
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=3.7e-29 Score=219.56 Aligned_cols=236 Identities=15% Similarity=0.159 Sum_probs=146.7
Q ss_pred CCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCc
Q 015903 137 NHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGY 216 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~ 216 (398)
+|+|||+||++++...|..+++.|. +|+|+++|+||||.|..+. ..+++++++|+.++++.++.++++++||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~ 75 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAIS-----VDGFADVSRLLSQTLQSYNILPYWLVGYSL 75 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCcc-----ccCHHHHHHHHHHHHHHcCCCCeEEEEECH
Confidence 5789999999999999999999985 7999999999999998654 247999999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCc-cceEEEECCcCcccCCCCchhHHHh-HHhhhhhhccCCccch-hhhhhhccCCCCCChhhhhhh
Q 015903 217 FSPVVVKYASKHKDK-LKDLILLNPPLTAKHANLPSTLSIF-SNFLLGEIFSQDPLRA-SDKALTSCGPYQMKEDDAMVY 293 (398)
Q Consensus 217 Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 293 (398)
||.+++.+|.++|+. |+++|++++....... ....... ........+....... ....+...............+
T Consensus 76 Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (242)
T PRK11126 76 GGRIAMYYACQGLAGGLCGLIVEGGNPGLQNA--EERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQL 153 (242)
T ss_pred HHHHHHHHHHhCCcccccEEEEeCCCCCCCCH--HHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHH
Confidence 999999999999764 9999999875422110 0000000 0000000011111000 000000000000111111111
Q ss_pred hcccccCCCchhHHHHHHHhhh-hhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhcCCcEEEcCCCC
Q 015903 294 RSPYLSSGSSGFALTAISKGMK-KQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDSNHELIELPMAG 372 (398)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~i~~~g 372 (398)
....... .......+..... ........ ...++++|+++|+|++|..+. .+.+..+.++++++++|
T Consensus 154 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------~l~~i~~P~lii~G~~D~~~~-----~~~~~~~~~~~~i~~~g 220 (242)
T PRK11126 154 VAKRSNN--NGAAVAAMLEATSLAKQPDLRP------ALQALTFPFYYLCGERDSKFQ-----ALAQQLALPLHVIPNAG 220 (242)
T ss_pred HHhcccC--CHHHHHHHHHhcCcccCCcHHH------HhhccCCCeEEEEeCCcchHH-----HHHHHhcCeEEEeCCCC
Confidence 0000000 0000000000000 00000111 224679999999999998542 23333378999999999
Q ss_pred CcccccChHHHHHHHHHHHhh
Q 015903 373 HHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 373 H~~~~e~p~~~~~~i~~fl~~ 393 (398)
|+++.|+|+++++.|.+||++
T Consensus 221 H~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 221 HNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred CchhhhChHHHHHHHHHHHhh
Confidence 999999999999999999975
No 25
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=2.4e-28 Score=224.83 Aligned_cols=263 Identities=14% Similarity=0.190 Sum_probs=160.7
Q ss_pred CCeEEEEEeccCCCCCEEEEecCCCCCcc------------chhhhhH---hh-hcCCeEEEEcCCCCCCCCCCCCCCCC
Q 015903 123 EIFRWFCVESGNADNHTVLLIHGFPSQAY------------SYRKVLP---VL-SKNYHAIAFDWLGFGFSEKPQPGYGF 186 (398)
Q Consensus 123 ~g~~l~~~~~g~~~~p~vvllHG~~~~~~------------~~~~~~~---~L-~~g~~Vi~~D~rG~G~S~~~~~~~~~ 186 (398)
+|++++|...|+. ++++||+||++++.. .|..+++ .| +++|+||++|+||||.|...
T Consensus 44 ~~~~l~y~~~G~~-~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~------ 116 (343)
T PRK08775 44 EDLRLRYELIGPA-GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV------ 116 (343)
T ss_pred CCceEEEEEeccC-CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC------
Confidence 8889999998864 335666666655544 6888886 57 46999999999999987421
Q ss_pred CCCHHHHHHHHHHHHHHhCCCcE-EEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhc
Q 015903 187 DYTLDEYVASLESFVNEIANDKV-SLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIF 265 (398)
Q Consensus 187 ~~~~~~~~~dl~~~l~~l~~~~v-~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (398)
.++.+++++|+.+++++++++++ +++||||||++++.+|.++|++|+++|++++...... ............. ...
T Consensus 117 ~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~--~~~~~~~~~~~~~-~~~ 193 (343)
T PRK08775 117 PIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHP--YAAAWRALQRRAV-ALG 193 (343)
T ss_pred CCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCH--HHHHHHHHHHHHH-HcC
Confidence 36789999999999999999775 7999999999999999999999999999998643210 0000000000000 000
Q ss_pred cCC--ccc--hhhhhhhccCCCCCChhhhhhhhcccc--c----CCCchhHHH---HHHHhh-hhhHHHHHHHHHH-hhc
Q 015903 266 SQD--PLR--ASDKALTSCGPYQMKEDDAMVYRSPYL--S----SGSSGFALT---AISKGM-KKQLKQYVEEMRT-ILM 330 (398)
Q Consensus 266 ~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~-~~~ 330 (398)
... ... .......... ..........+..... . .....+... ...... ............. ...
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (343)
T PRK08775 194 QLQCAEKHGLALARQLAMLS-YRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVD 272 (343)
T ss_pred CCCCCchhHHHHHHHHHHHH-cCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCC
Confidence 000 000 0000000000 0000000000000000 0 000000000 000000 0000011111110 112
Q ss_pred cCCCCCCEEEEeeCCCCccCchhHHHHHHhc--CCcEEEcCC-CCCcccccChHHHHHHHHHHHhhccc
Q 015903 331 DKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS--NHELIELPM-AGHHVQEDSGEELGKVISEIFRKRRL 396 (398)
Q Consensus 331 ~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~--~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~~~~ 396 (398)
..+|++|+|+|+|++|.++|++..+++.+.+ +++++++++ +||.+++|+|++|++.|.+||++.+.
T Consensus 273 l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 273 PEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTGE 341 (343)
T ss_pred hhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhccc
Confidence 3678999999999999999999998888877 789999985 99999999999999999999987654
No 26
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.96 E-value=3.7e-28 Score=212.94 Aligned_cols=236 Identities=16% Similarity=0.169 Sum_probs=149.4
Q ss_pred CEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcC
Q 015903 138 HTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYF 217 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~G 217 (398)
|+|||+||++++...|..+.+.|.++|+|+++|+||+|.|.... .++.+++++++.+.+ .++++++|||||
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~-----~~~~~~~~~~~~~~~----~~~~~lvG~S~G 75 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFG-----PLSLADAAEAIAAQA----PDPAIWLGWSLG 75 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCC-----CcCHHHHHHHHHHhC----CCCeEEEEEcHH
Confidence 79999999999999999999999999999999999999987543 357788877776543 368999999999
Q ss_pred hHHHHHHHHhCCCccceEEEECCcCcccCC-CCc-hhHHHhHHhhhhhhccCCccchhhhhhhc--cCCCCCChhhhhhh
Q 015903 218 SPVVVKYASKHKDKLKDLILLNPPLTAKHA-NLP-STLSIFSNFLLGEIFSQDPLRASDKALTS--CGPYQMKEDDAMVY 293 (398)
Q Consensus 218 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 293 (398)
|.+++.+|.++|++++++|++++....... ... .........+... +..........+... .... ........+
T Consensus 76 g~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 153 (245)
T TIGR01738 76 GLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQ-LSDDYQRTIERFLALQTLGTP-TARQDARAL 153 (245)
T ss_pred HHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHH-hhhhHHHHHHHHHHHHHhcCC-ccchHHHHH
Confidence 999999999999999999999875432111 011 0000000000000 000000000111000 0000 000000001
Q ss_pred hcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCcEEEcCCCC
Q 015903 294 RSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELIELPMAG 372 (398)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~~g 372 (398)
...+........ ..+...+. ............+|++|+++++|++|.++|.+..+.+.+.+ ++++++++++|
T Consensus 154 ~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g 226 (245)
T TIGR01738 154 KQTLLARPTPNV--QVLQAGLE-----ILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAA 226 (245)
T ss_pred HHHhhccCCCCH--HHHHHHHH-----HhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCC
Confidence 110000000000 00000000 00000001122567999999999999999999999898888 99999999999
Q ss_pred CcccccChHHHHHHHHHHH
Q 015903 373 HHVQEDSGEELGKVISEIF 391 (398)
Q Consensus 373 H~~~~e~p~~~~~~i~~fl 391 (398)
|++++|+|+++++.|.+|+
T Consensus 227 H~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 227 HAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CCccccCHHHHHHHHHhhC
Confidence 9999999999999999986
No 27
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=2.4e-27 Score=220.49 Aligned_cols=269 Identities=12% Similarity=0.147 Sum_probs=162.8
Q ss_pred CCeEEEEEeccCC---CCCEEEEecCCCCCccc-------------hhhhh----HhhhcCCeEEEEcCCCC-CCCCCCC
Q 015903 123 EIFRWFCVESGNA---DNHTVLLIHGFPSQAYS-------------YRKVL----PVLSKNYHAIAFDWLGF-GFSEKPQ 181 (398)
Q Consensus 123 ~g~~l~~~~~g~~---~~p~vvllHG~~~~~~~-------------~~~~~----~~L~~g~~Vi~~D~rG~-G~S~~~~ 181 (398)
+|++++|..+|.. .+|+|||+||++++... |..++ ..+.++|+||++|++|+ |.|+.+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 8899999999863 36899999999998874 56665 34466999999999983 5554322
Q ss_pred C-------CCC---CCCCHHHHHHHHHHHHHHhCCCc-EEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCc
Q 015903 182 P-------GYG---FDYTLDEYVASLESFVNEIANDK-VSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLP 250 (398)
Q Consensus 182 ~-------~~~---~~~~~~~~~~dl~~~l~~l~~~~-v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 250 (398)
. .++ ..++++++++++.++++++++++ ++++||||||.+++.+|.++|++|+++|++++.........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~- 189 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNI- 189 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHH-
Confidence 1 000 14789999999999999999999 48999999999999999999999999999997653321100
Q ss_pred hhHHHhHHhhhhh-hcc--------CCccch--hh------------hhhhccCCCCCCh---------hhhhhhh----
Q 015903 251 STLSIFSNFLLGE-IFS--------QDPLRA--SD------------KALTSCGPYQMKE---------DDAMVYR---- 294 (398)
Q Consensus 251 ~~~~~~~~~~~~~-~~~--------~~~~~~--~~------------~~~~~~~~~~~~~---------~~~~~~~---- 294 (398)
.+........... .+. ..+... .. ............. .....+.
T Consensus 190 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~ 269 (379)
T PRK00175 190 AFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQG 269 (379)
T ss_pred HHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHH
Confidence 0110000110000 000 000000 00 0000000000000 0000000
Q ss_pred cccccCCCchhHHHHHHHhhh-hhHHHHH-HHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CC----cEEE
Q 015903 295 SPYLSSGSSGFALTAISKGMK-KQLKQYV-EEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NH----ELIE 367 (398)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~----~~~~ 367 (398)
..+.......... .....+. .+..... ..+. ....+|++|+|+|+|++|.++|++.++++.+.+ +. ++++
T Consensus 270 ~~~~~~~d~~~~~-~~~~~~~~~d~~~~~~~d~~--~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~ 346 (379)
T PRK00175 270 DKFVERFDANSYL-YLTRALDYFDPARGRGGDLA--AALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAE 346 (379)
T ss_pred HHHhhccCchHHH-HHHHHHHhccccCCCCCCHH--HHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEE
Confidence 0000000000000 0000000 0000000 0011 122577999999999999999999999999988 65 6777
Q ss_pred cC-CCCCcccccChHHHHHHHHHHHhhcc
Q 015903 368 LP-MAGHHVQEDSGEELGKVISEIFRKRR 395 (398)
Q Consensus 368 i~-~~gH~~~~e~p~~~~~~i~~fl~~~~ 395 (398)
++ ++||.+++|+|+++++.|.+||++..
T Consensus 347 i~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 347 IDSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred eCCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 75 89999999999999999999998753
No 28
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=1.1e-27 Score=221.16 Aligned_cols=268 Identities=13% Similarity=0.160 Sum_probs=161.0
Q ss_pred CCeEEEEEeccC---CCCCEEEEecCCCCCcc-----------chhhhh----HhhhcCCeEEEEcCCC--CCCCCCCCC
Q 015903 123 EIFRWFCVESGN---ADNHTVLLIHGFPSQAY-----------SYRKVL----PVLSKNYHAIAFDWLG--FGFSEKPQP 182 (398)
Q Consensus 123 ~g~~l~~~~~g~---~~~p~vvllHG~~~~~~-----------~~~~~~----~~L~~g~~Vi~~D~rG--~G~S~~~~~ 182 (398)
+|.+++|..+|+ ..+++|||+||++++.. .|+.++ ..+.++|+|+++|+|| +|.|.....
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 889999999985 33689999999998763 377775 3445699999999999 555543110
Q ss_pred -C----C---CCCCCHHHHHHHHHHHHHHhCCCc-EEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhH
Q 015903 183 -G----Y---GFDYTLDEYVASLESFVNEIANDK-VSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTL 253 (398)
Q Consensus 183 -~----~---~~~~~~~~~~~dl~~~l~~l~~~~-v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 253 (398)
. + ...++++++++|+.+++++++.++ ++++||||||.+++.+|.++|++|+++|++++......... .+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~ 172 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCI-AFN 172 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHH-HHH
Confidence 0 0 124789999999999999999999 99999999999999999999999999999998653321100 011
Q ss_pred HHhHHhhhhh-hccCC-------ccchh--hhhhhccCCCCCChhhhhhhhcccccCC-C-----chhHHHHH-------
Q 015903 254 SIFSNFLLGE-IFSQD-------PLRAS--DKALTSCGPYQMKEDDAMVYRSPYLSSG-S-----SGFALTAI------- 310 (398)
Q Consensus 254 ~~~~~~~~~~-~~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~------- 310 (398)
.......... ..... +.... ...+.... ..........+........ . .......+
T Consensus 173 ~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
T TIGR01392 173 EVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLT-YRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDK 251 (351)
T ss_pred HHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHh-cCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHH
Confidence 1000000000 00000 00000 00000000 0000000000100000000 0 00000000
Q ss_pred -HHhh-hhhHHHHHHHHHH----------hhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCcEE-----EcCCCC
Q 015903 311 -SKGM-KKQLKQYVEEMRT----------ILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELI-----ELPMAG 372 (398)
Q Consensus 311 -~~~~-~~~~~~~~~~~~~----------~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~-----~i~~~g 372 (398)
.... ..........+.. .....+|++|+|+|+|++|.++|++.++.+.+.+ +.+++ +++++|
T Consensus 252 ~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~G 331 (351)
T TIGR01392 252 FVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYG 331 (351)
T ss_pred HHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCC
Confidence 0000 0000000000100 1123567999999999999999999999999988 66654 567899
Q ss_pred CcccccChHHHHHHHHHHHh
Q 015903 373 HHVQEDSGEELGKVISEIFR 392 (398)
Q Consensus 373 H~~~~e~p~~~~~~i~~fl~ 392 (398)
|.+++|+|++|++.|.+||+
T Consensus 332 H~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 332 HDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred cchhhcCHHHHHHHHHHHhC
Confidence 99999999999999999985
No 29
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=3.4e-28 Score=210.43 Aligned_cols=227 Identities=23% Similarity=0.339 Sum_probs=150.9
Q ss_pred EEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcChH
Q 015903 140 VLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFSP 219 (398)
Q Consensus 140 vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ 219 (398)
|||+||++++...|..+++.|+++|+|+++|+||+|.|..... ...++.+++++|+.+++++++.++++++|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPD--YSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSS--GSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccc--cCCcchhhhhhhhhhcccccccccccccccccccc
Confidence 7999999999999999999998899999999999999987663 12578999999999999999999999999999999
Q ss_pred HHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhhhhccccc
Q 015903 220 VVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMVYRSPYLS 299 (398)
Q Consensus 220 ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (398)
+++.++.++|++|+++|+++++..............+...+.................... ...........
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--- 150 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWF-----DGDEPEDLIRS--- 150 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----THHHHHHHHHH---
T ss_pred cccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccc-----ccccccccccc---
Confidence 9999999999999999999997643211000000011111100000000000000000000 00000000000
Q ss_pred CCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCcEEEcCCCCCccccc
Q 015903 300 SGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELIELPMAGHHVQED 378 (398)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~~gH~~~~e 378 (398)
....+....... ....... ....++++|+++++|++|.+++.+..+.+.+.+ ++++++++++||++++|
T Consensus 151 ------~~~~~~~~~~~~--~~~~~~~--~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 220 (228)
T PF12697_consen 151 ------SRRALAEYLRSN--LWQADLS--EALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLE 220 (228)
T ss_dssp ------HHHHHHHHHHHH--HHHHHHH--HHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHH
T ss_pred ------cccccccccccc--ccccccc--ccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHH
Confidence 000011111110 0111111 122456999999999999999999999999888 99999999999999999
Q ss_pred ChHHHHHH
Q 015903 379 SGEELGKV 386 (398)
Q Consensus 379 ~p~~~~~~ 386 (398)
+|+++++.
T Consensus 221 ~p~~~~~a 228 (228)
T PF12697_consen 221 QPDEVAEA 228 (228)
T ss_dssp SHHHHHHH
T ss_pred CHHHHhcC
Confidence 99999864
No 30
>PRK07581 hypothetical protein; Validated
Probab=99.96 E-value=1.4e-27 Score=219.81 Aligned_cols=267 Identities=12% Similarity=0.065 Sum_probs=156.2
Q ss_pred CCeEEEEEeccCC---CCCEEEEecCCCCCccchhhhh---Hhhh-cCCeEEEEcCCCCCCCCCCCCCCCCCCCHH----
Q 015903 123 EIFRWFCVESGNA---DNHTVLLIHGFPSQAYSYRKVL---PVLS-KNYHAIAFDWLGFGFSEKPQPGYGFDYTLD---- 191 (398)
Q Consensus 123 ~g~~l~~~~~g~~---~~p~vvllHG~~~~~~~~~~~~---~~L~-~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~---- 191 (398)
+|++++|...|+. ..|+||++||++++...|..++ +.|. ++|+||++|+||||.|+.+.... ..++++
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~-~~~~~~~~~~ 102 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTP-APFNAARFPH 102 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCC-CCCCCCCCCc
Confidence 8899999999863 3466777777777766676543 4675 48999999999999998654210 023322
Q ss_pred -HHHHHHHH----HHHHhCCCcE-EEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchh-HHHhHHhhhh--
Q 015903 192 -EYVASLES----FVNEIANDKV-SLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPST-LSIFSNFLLG-- 262 (398)
Q Consensus 192 -~~~~dl~~----~l~~l~~~~v-~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~-- 262 (398)
.+++|+.+ ++++++++++ +|+||||||++|+.+|.++|++|+++|++++...... .... .......+..
T Consensus 103 ~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~--~~~~~~~~~~~~l~~~~ 180 (339)
T PRK07581 103 VTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTP--HNFVFLEGLKAALTADP 180 (339)
T ss_pred eeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCH--HHHHHHHHHHHHHHhCC
Confidence 24555554 7788999994 7999999999999999999999999999987543210 0000 0000000000
Q ss_pred hh----ccCCccchhh-------------hhhhccCCCCCC----hhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHH
Q 015903 263 EI----FSQDPLRASD-------------KALTSCGPYQMK----EDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQY 321 (398)
Q Consensus 263 ~~----~~~~~~~~~~-------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (398)
.+ +...+..... .++......... ......+................+...........
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (339)
T PRK07581 181 AFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRN 260 (339)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccC
Confidence 00 0000000000 000000000000 00000000000000000000000000000000000
Q ss_pred H---HHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCcEEEcCC-CCCcccccChHHHHHHHHHHHhhc
Q 015903 322 V---EEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELIELPM-AGHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 322 ~---~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
. .... ....+|++|||+|+|++|..+|++.++.+.+.+ +++++++++ +||+++.|+++++...|.+||++.
T Consensus 261 ~~~~~d~~--~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 261 PAYGGDLA--AALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred cccCCCHH--HHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 0 0000 122467999999999999999999999999988 999999998 899999999999999999999874
No 31
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.96 E-value=1.4e-27 Score=223.07 Aligned_cols=253 Identities=21% Similarity=0.262 Sum_probs=165.4
Q ss_pred cCCeEEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 015903 122 DEIFRWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFV 201 (398)
Q Consensus 122 ~~g~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l 201 (398)
.++..++|...|++++|+|||+||++++...|..+...|.++|+|+++|+||||.|..... ..+++++++++.+++
T Consensus 116 ~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~----~~~~~~~~~~~~~~~ 191 (371)
T PRK14875 116 IGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVG----AGSLDELAAAVLAFL 191 (371)
T ss_pred EcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCCC----CCCHHHHHHHHHHHH
Confidence 3677888988887778999999999999999999999999899999999999999965443 468999999999999
Q ss_pred HHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhcc-
Q 015903 202 NEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSC- 280 (398)
Q Consensus 202 ~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 280 (398)
+.++.++++++|||+||.+++.+|.++|+++.++|++++........ ..+...+.. ..........+...
T Consensus 192 ~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~ 262 (371)
T PRK14875 192 DALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN-GDYIDGFVA--------AESRRELKPVLELLF 262 (371)
T ss_pred HhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccc-hhHHHHhhc--------ccchhHHHHHHHHHh
Confidence 99999999999999999999999999999999999998764322110 011000000 00000000000000
Q ss_pred -CCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHH
Q 015903 281 -GPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCN 359 (398)
Q Consensus 281 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~ 359 (398)
.+............. +............+....... ............++++|+|+++|++|.++|++..+.+..
T Consensus 263 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~~ 338 (371)
T PRK14875 263 ADPALVTRQMVEDLLK-YKRLDGVDDALRALADALFAG---GRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLPD 338 (371)
T ss_pred cChhhCCHHHHHHHHH-HhccccHHHHHHHHHHHhccC---cccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhccC
Confidence 000000000000000 000000000000000000000 000000011224569999999999999999877655433
Q ss_pred hcCCcEEEcCCCCCcccccChHHHHHHHHHHHhh
Q 015903 360 DSNHELIELPMAGHHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 360 ~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 393 (398)
+.++.+++++||++++++|+++.+.|.+||++
T Consensus 339 --~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 339 --GVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred --CCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 67999999999999999999999999999975
No 32
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.96 E-value=1.7e-27 Score=211.65 Aligned_cols=258 Identities=13% Similarity=0.081 Sum_probs=160.2
Q ss_pred CCeEEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 015903 123 EIFRWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFV 201 (398)
Q Consensus 123 ~g~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l 201 (398)
+|-+++|.+. ++++|+|||+||++.+.+.|..+...|.+ ||+|+++|+||||.|...... .++++++++++.+++
T Consensus 5 ~~~~~~~~~~-~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~---~~~~~~~~~~l~~~i 80 (273)
T PLN02211 5 NGEEVTDMKP-NRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADS---VTTFDEYNKPLIDFL 80 (273)
T ss_pred cccccccccc-cCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCccc---CCCHHHHHHHHHHHH
Confidence 5667777773 24478999999999999999999999976 999999999999987543321 378999999999999
Q ss_pred HHhC-CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhcc
Q 015903 202 NEIA-NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSC 280 (398)
Q Consensus 202 ~~l~-~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (398)
+.++ .++++|+||||||.+++.++.++|++|+++|++++........ .. ...... ...+................
T Consensus 81 ~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~--~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 156 (273)
T PLN02211 81 SSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQ--TD-EDMKDG-VPDLSEFGDVYELGFGLGPD 156 (273)
T ss_pred HhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCC--HH-HHHhcc-ccchhhhccceeeeeccCCC
Confidence 9985 5899999999999999999999999999999998753321100 00 000000 00000000000000000000
Q ss_pred ---CCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCC-CCCEEEEeeCCCCccCchhHHH
Q 015903 281 ---GPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSW-KIPTTVCWGQRDRWLNNDGVED 356 (398)
Q Consensus 281 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~Pvlii~G~~D~~v~~~~~~~ 356 (398)
.......+....+ +........ .......+.......+..........++ ++|+++|.|++|..+|++..+.
T Consensus 157 ~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~ 232 (273)
T PLN02211 157 QPPTSAIIKKEFRRKI---LYQMSPQED-STLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEA 232 (273)
T ss_pred CCCceeeeCHHHHHHH---HhcCCCHHH-HHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHH
Confidence 0000000000000 000000000 0000000000000000000000001234 7899999999999999999999
Q ss_pred HHHhc-CCcEEEcCCCCCcccccChHHHHHHHHHHHhh
Q 015903 357 FCNDS-NHELIELPMAGHHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 357 l~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 393 (398)
+.+.+ ..++++++ +||.+++++|+++.+.|.++...
T Consensus 233 m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 233 MIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred HHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 99998 77999997 79999999999999999998764
No 33
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.96 E-value=3.8e-27 Score=199.73 Aligned_cols=259 Identities=16% Similarity=0.194 Sum_probs=178.1
Q ss_pred cCCeEEEEEeccCCC----CCEEEEecCCCCCc-cchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 015903 122 DEIFRWFCVESGNAD----NHTVLLIHGFPSQA-YSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVA 195 (398)
Q Consensus 122 ~~g~~l~~~~~g~~~----~p~vvllHG~~~~~-~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 195 (398)
..|..+++..+-+.+ .-.|+++||++... +.|..++..|+. ||.|+++|++|||+|++... +..+++..++
T Consensus 35 ~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~---yi~~~d~~v~ 111 (313)
T KOG1455|consen 35 PRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA---YVPSFDLVVD 111 (313)
T ss_pred CCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc---cCCcHHHHHH
Confidence 477788887775522 34799999998765 788989999988 99999999999999997665 4678999999
Q ss_pred HHHHHHHHhC------CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCc
Q 015903 196 SLESFVNEIA------NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDP 269 (398)
Q Consensus 196 dl~~~l~~l~------~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (398)
|+....+... ..+.+++||||||.+++.++.++|+..+++|+++|.+...+...|.........++..+.....
T Consensus 112 D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk 191 (313)
T KOG1455|consen 112 DVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWK 191 (313)
T ss_pred HHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCcee
Confidence 9999888642 2368999999999999999999999999999999988766555455444443333333333222
Q ss_pred cchhhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCcc
Q 015903 270 LRASDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWL 349 (398)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v 349 (398)
........... ...+.........+........... ... +.+....+.. ...++++|++++||++|.++
T Consensus 192 ~vp~~d~~~~~--~kdp~~r~~~~~npl~y~g~pRl~T--~~E-----lLr~~~~le~--~l~~vtvPflilHG~dD~VT 260 (313)
T KOG1455|consen 192 IVPTKDIIDVA--FKDPEKRKILRSDPLCYTGKPRLKT--AYE-----LLRVTADLEK--NLNEVTVPFLILHGTDDKVT 260 (313)
T ss_pred ecCCccccccc--cCCHHHHHHhhcCCceecCCccHHH--HHH-----HHHHHHHHHH--hcccccccEEEEecCCCccc
Confidence 11111000000 0001111122222222222211111 111 1111111111 23567999999999999999
Q ss_pred CchhHHHHHHhc---CCcEEEcCCCCCcccc----cChHHHHHHHHHHHhhc
Q 015903 350 NNDGVEDFCNDS---NHELIELPMAGHHVQE----DSGEELGKVISEIFRKR 394 (398)
Q Consensus 350 ~~~~~~~l~~~~---~~~~~~i~~~gH~~~~----e~p~~~~~~i~~fl~~~ 394 (398)
.++.++++++.. +.++..|||+-|.++. |+-+.|...|.+||+++
T Consensus 261 Dp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 261 DPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred CcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999999999998 8999999999998863 46678899999999875
No 34
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.96 E-value=6.3e-27 Score=210.32 Aligned_cols=260 Identities=18% Similarity=0.245 Sum_probs=158.9
Q ss_pred ccCCeEEEEEeccCC-CCCEEEEecCCCCCccc-hhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 015903 121 ADEIFRWFCVESGNA-DNHTVLLIHGFPSQAYS-YRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASL 197 (398)
Q Consensus 121 ~~~g~~l~~~~~g~~-~~p~vvllHG~~~~~~~-~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl 197 (398)
+.++.++.|...+.. .+++|||+||++++... |..+...+.+ ||+|+++|+||+|.|..+.... ..++.+++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~-~~~~~~~~~~~~ 86 (288)
T TIGR01250 8 TVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSD-ELWTIDYFVDEL 86 (288)
T ss_pred cCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCccc-ccccHHHHHHHH
Confidence 346667778777643 36899999998766554 5666677776 8999999999999998654321 027899999999
Q ss_pred HHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhh
Q 015903 198 ESFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKAL 277 (398)
Q Consensus 198 ~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (398)
.++++.++.++++++||||||.+++.+|.++|++++++|++++..... ......... . ..+............
T Consensus 87 ~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-----~~~~~~~~~-~-~~~~~~~~~~~~~~~ 159 (288)
T TIGR01250 87 EEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAP-----EYVKELNRL-R-KELPPEVRAAIKRCE 159 (288)
T ss_pred HHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccch-----HHHHHHHHH-H-hhcChhHHHHHHHHH
Confidence 999999999999999999999999999999999999999998754321 110000000 0 000000000000000
Q ss_pred hccCCCCCChhhhhhhhcccc-----cCCCchhHHHHHHHhhhhhHH------------HHHHHHHHhhccCCCCCCEEE
Q 015903 278 TSCGPYQMKEDDAMVYRSPYL-----SSGSSGFALTAISKGMKKQLK------------QYVEEMRTILMDKSWKIPTTV 340 (398)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~i~~Pvli 340 (398)
. .. .............+. ..................... .............++++|+++
T Consensus 160 ~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 236 (288)
T TIGR01250 160 A-SG--DYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLL 236 (288)
T ss_pred h-cc--CcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEE
Confidence 0 00 000000000000000 000000000000000000000 000000000122467999999
Q ss_pred EeeCCCCccCchhHHHHHHhc-CCcEEEcCCCCCcccccChHHHHHHHHHHHh
Q 015903 341 CWGQRDRWLNNDGVEDFCNDS-NHELIELPMAGHHVQEDSGEELGKVISEIFR 392 (398)
Q Consensus 341 i~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 392 (398)
++|++|.+ +++..+.+.+.+ +.++++++++||+++.|+|+++.+.|.+||+
T Consensus 237 i~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 237 TVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred EecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 99999985 667788888888 8899999999999999999999999999985
No 35
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=2e-27 Score=213.85 Aligned_cols=249 Identities=28% Similarity=0.450 Sum_probs=160.7
Q ss_pred CCCCEEEEecCCCCCccchhhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEE
Q 015903 135 ADNHTVLLIHGFPSQAYSYRKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLV 212 (398)
Q Consensus 135 ~~~p~vvllHG~~~~~~~~~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lv 212 (398)
.++|+||++||++++...|+.+++.|.+ |+.|+++|++|+|.++..+.. ..|+..++++.+..+......++++++
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~--~~y~~~~~v~~i~~~~~~~~~~~~~lv 133 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRG--PLYTLRELVELIRRFVKEVFVEPVSLV 133 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCC--CceehhHHHHHHHHHHHhhcCcceEEE
Confidence 3589999999999999999999999998 499999999999955444432 358999999999999999998999999
Q ss_pred EeCcChHHHHHHHHhCCCccceEE---EECCcCcccCCCCchhHHHhHHhhhhh-hcc----CCccchhhhhhhc-----
Q 015903 213 VQGYFSPVVVKYASKHKDKLKDLI---LLNPPLTAKHANLPSTLSIFSNFLLGE-IFS----QDPLRASDKALTS----- 279 (398)
Q Consensus 213 G~S~Gg~ia~~~a~~~p~~v~~lv---l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~----- 279 (398)
|||+||.+|..+|+.+|+.|+++| +++++...................... ... ..+.......+..
T Consensus 134 ghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 213 (326)
T KOG1454|consen 134 GHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVV 213 (326)
T ss_pred EeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeee
Confidence 999999999999999999999999 555554433222111111111111100 000 0000000000000
Q ss_pred -cCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhH---HHHHHHHHHhhccCCC-CCCEEEEeeCCCCccCchhH
Q 015903 280 -CGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQL---KQYVEEMRTILMDKSW-KIPTTVCWGQRDRWLNNDGV 354 (398)
Q Consensus 280 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i-~~Pvlii~G~~D~~v~~~~~ 354 (398)
.................. ...+........+..-. ......+ +++ ++|+|+|+|++|+++|.+.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~pvlii~G~~D~~~p~~~~ 283 (326)
T KOG1454|consen 214 YTDPSRLLEKLLHLLSRPV----KEHFHRDARLSLFLELLGFDENLLSLI------KKIWKCPVLIIWGDKDQIVPLELA 283 (326)
T ss_pred ccccccchhhhhhheeccc----ccchhhhheeeEEEeccCccchHHHhh------ccccCCceEEEEcCcCCccCHHHH
Confidence 000000000000000000 00000000000000000 0111111 233 49999999999999999999
Q ss_pred HHHHHhc-CCcEEEcCCCCCcccccChHHHHHHHHHHHhhcc
Q 015903 355 EDFCNDS-NHELIELPMAGHHVQEDSGEELGKVISEIFRKRR 395 (398)
Q Consensus 355 ~~l~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 395 (398)
..+.+.+ ++++++++++||.+++|.|++++..|..|+....
T Consensus 284 ~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 284 EELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred HHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 9999999 9999999999999999999999999999998753
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.96 E-value=3.7e-27 Score=206.96 Aligned_cols=245 Identities=16% Similarity=0.237 Sum_probs=153.3
Q ss_pred CCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCCCcEEEEEeC
Q 015903 137 NHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVAS-LESFVNEIANDKVSLVVQG 215 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~d-l~~~l~~l~~~~v~lvG~S 215 (398)
+|+||++||++++...|..+.+.|+++|+|+++|+||+|.|..+... ..+++++++++ +..+++.++.++++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEI--ERYDFEEAAQDILATLLDQLGIEPFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCcc--ChhhHHHHHHHHHHHHHHHcCCCeEEEEEec
Confidence 37899999999999999999999988999999999999999765432 24678999999 7888888888999999999
Q ss_pred cChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchh-hhhhhc--cCC-CCCChhhhh
Q 015903 216 YFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRAS-DKALTS--CGP-YQMKEDDAM 291 (398)
Q Consensus 216 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~-~~~~~~~~~ 291 (398)
+||.+++.+|.++|+.|++++++++............ ...........+........ ...... ... .........
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSPGLATEEERAA-RRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQ 157 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhh-hhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhH
Confidence 9999999999999999999999987543221100000 00000000000000000000 000000 000 000111110
Q ss_pred hhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCcEEEcCC
Q 015903 292 VYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELIELPM 370 (398)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~ 370 (398)
.+......... ......+............ ....++++|+++|+|++|..++ +..+.+.+.. +.+++++++
T Consensus 158 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~ 229 (251)
T TIGR03695 158 ALRAKRLANNP-EGLAKMLRATGLGKQPSLW------PKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIAN 229 (251)
T ss_pred HHHHhcccccc-hHHHHHHHHhhhhcccchH------HHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcC
Confidence 01110000000 0000000000000000000 1124679999999999998764 5567777777 899999999
Q ss_pred CCCcccccChHHHHHHHHHHHh
Q 015903 371 AGHHVQEDSGEELGKVISEIFR 392 (398)
Q Consensus 371 ~gH~~~~e~p~~~~~~i~~fl~ 392 (398)
+||++++|+|+++.+.|.+||+
T Consensus 230 ~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 230 AGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred CCCCcCccChHHHHHHHHHHhC
Confidence 9999999999999999999984
No 37
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.95 E-value=2.1e-26 Score=205.25 Aligned_cols=262 Identities=21% Similarity=0.289 Sum_probs=173.7
Q ss_pred cCCeEEEEEeccCCCC--CEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 015903 122 DEIFRWFCVESGNADN--HTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLE 198 (398)
Q Consensus 122 ~~g~~l~~~~~g~~~~--p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~ 198 (398)
.+|..++|..+..... .+||++||++.+...|..++..|.. ||.|+++|+||||.|.. ...+...++.++.+|+.
T Consensus 17 ~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r--~~rg~~~~f~~~~~dl~ 94 (298)
T COG2267 17 ADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPR--GQRGHVDSFADYVDDLD 94 (298)
T ss_pred CCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCC--CCcCCchhHHHHHHHHH
Confidence 5888999888765433 5899999999999999999999988 99999999999999984 22234556999999999
Q ss_pred HHHHHhC----CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhh
Q 015903 199 SFVNEIA----NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASD 274 (398)
Q Consensus 199 ~~l~~l~----~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (398)
++++... ..+++++||||||.|++.++.+++.+|+++|+.+|.......................+........ .
T Consensus 95 ~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~ 173 (298)
T COG2267 95 AFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDS-N 173 (298)
T ss_pred HHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccccccccCc-c
Confidence 9999875 3589999999999999999999999999999999987655200111111111111111111111111 0
Q ss_pred hhhhccCCCCCC--hhhhhhh-hcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccC-
Q 015903 275 KALTSCGPYQMK--EDDAMVY-RSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLN- 350 (398)
Q Consensus 275 ~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~- 350 (398)
..........+ ......+ ..+..........+ +...+... . ........++++|+|+++|++|.+++
T Consensus 174 -~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w--~~~~~~a~-----~-~~~~~~~~~~~~PvLll~g~~D~vv~~ 244 (298)
T COG2267 174 -LLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRW--VDLALLAG-----R-VPALRDAPAIALPVLLLQGGDDRVVDN 244 (298)
T ss_pred -cccCcCcchhhcCHHHHHHHhcCCccccCCccHHH--HHHHHHhh-----c-ccchhccccccCCEEEEecCCCccccC
Confidence 00000001111 1111112 12221222111111 11111000 0 11122245779999999999999999
Q ss_pred chhHHHHHHhc---CCcEEEcCCCCCccccc-Ch--HHHHHHHHHHHhhcc
Q 015903 351 NDGVEDFCNDS---NHELIELPMAGHHVQED-SG--EELGKVISEIFRKRR 395 (398)
Q Consensus 351 ~~~~~~l~~~~---~~~~~~i~~~gH~~~~e-~p--~~~~~~i~~fl~~~~ 395 (398)
.+...++.+.. ++++++++|+.|.++.| +. +++.+.+.+|+.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 245 VEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred cHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 68888888877 67899999999999766 55 899999999998764
No 38
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.95 E-value=2.4e-26 Score=212.84 Aligned_cols=254 Identities=21% Similarity=0.276 Sum_probs=163.5
Q ss_pred cCCeEEEEEeccCC---CCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 015903 122 DEIFRWFCVESGNA---DNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASL 197 (398)
Q Consensus 122 ~~g~~l~~~~~g~~---~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl 197 (398)
.++..+++..+.+. ..++||++||++++...|..+++.|++ ||+|+++|+||||.|+.... +..+.+.+.+|+
T Consensus 118 ~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~---~~~~~~~~~~Dl 194 (395)
T PLN02652 118 ARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG---YVPSLDYVVEDT 194 (395)
T ss_pred CCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC---CCcCHHHHHHHH
Confidence 46667777776542 246899999999999899999999986 99999999999999986532 345788999999
Q ss_pred HHHHHHhCC----CcEEEEEeCcChHHHHHHHHhCCC---ccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCcc
Q 015903 198 ESFVNEIAN----DKVSLVVQGYFSPVVVKYASKHKD---KLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPL 270 (398)
Q Consensus 198 ~~~l~~l~~----~~v~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (398)
.++++.+.. .+++++||||||.+++.++. +|+ +++++|+.+|....... ..... ....+....+.....
T Consensus 195 ~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~--~~~~~-~~~~l~~~~~p~~~~ 270 (395)
T PLN02652 195 EAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPA--HPIVG-AVAPIFSLVAPRFQF 270 (395)
T ss_pred HHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccc--hHHHH-HHHHHHHHhCCCCcc
Confidence 999998753 37999999999999998764 554 89999999987543211 11111 111111111111100
Q ss_pred chhhhhhhccCCCCCCh-hhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCcc
Q 015903 271 RASDKALTSCGPYQMKE-DDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWL 349 (398)
Q Consensus 271 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v 349 (398)
..... ...+..... .....+..+........ .. . ..........+ .....+|++|+|+++|++|.++
T Consensus 271 ~~~~~---~~~~~s~~~~~~~~~~~dp~~~~g~i~--~~-~----~~~~~~~~~~l--~~~L~~I~vPvLIi~G~~D~vv 338 (395)
T PLN02652 271 KGANK---RGIPVSRDPAALLAKYSDPLVYTGPIR--VR-T----GHEILRISSYL--TRNFKSVTVPFMVLHGTADRVT 338 (395)
T ss_pred cCccc---ccCCcCCCHHHHHHHhcCCCcccCCch--HH-H----HHHHHHHHHHH--HhhcccCCCCEEEEEeCCCCCC
Confidence 00000 000000000 11111111111111000 00 0 00011111111 1123577999999999999999
Q ss_pred CchhHHHHHHhc---CCcEEEcCCCCCccccc-ChHHHHHHHHHHHhhc
Q 015903 350 NNDGVEDFCNDS---NHELIELPMAGHHVQED-SGEELGKVISEIFRKR 394 (398)
Q Consensus 350 ~~~~~~~l~~~~---~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~~ 394 (398)
|++.++++++.+ +.+++++++++|.++.| +++++.+.|.+||+++
T Consensus 339 p~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 339 DPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred CHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 999999998886 47899999999998766 7999999999999865
No 39
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=2.6e-26 Score=214.42 Aligned_cols=254 Identities=21% Similarity=0.317 Sum_probs=151.6
Q ss_pred cCCCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHhCCCcEEE
Q 015903 133 GNADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDY-TLDEYVASLESFVNEIANDKVSL 211 (398)
Q Consensus 133 g~~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~-~~~~~~~dl~~~l~~l~~~~v~l 211 (398)
+++++|+|||+||++++...|...+..|.++|+|+++|+||||.|+.+........ ..+.+++++.++++.++.++++|
T Consensus 101 ~~~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~l 180 (402)
T PLN02894 101 SKEDAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFIL 180 (402)
T ss_pred CCCCCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEE
Confidence 34457999999999999999988889998899999999999999976542100001 12246678888888889999999
Q ss_pred EEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCC-chhHHHh----HHhhhhhhc--cCCccch-----------h
Q 015903 212 VVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANL-PSTLSIF----SNFLLGEIF--SQDPLRA-----------S 273 (398)
Q Consensus 212 vG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~--~~~~~~~-----------~ 273 (398)
+||||||++++.+|.++|++|+++|+++|......... ....... ...+....+ ...+... .
T Consensus 181 vGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~ 260 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLV 260 (402)
T ss_pred EEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHH
Confidence 99999999999999999999999999998654322111 0001000 000000000 0000000 0
Q ss_pred hhhhh-cc----CCCCCChhhhhhhh----cccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeC
Q 015903 274 DKALT-SC----GPYQMKEDDAMVYR----SPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQ 344 (398)
Q Consensus 274 ~~~~~-~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~ 344 (398)
..... .. .......+....+. ............+..+. .. . ......-.....+|++|+++|+|+
T Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~---~~~~~~~~~~l~~I~vP~liI~G~ 334 (402)
T PLN02894 261 RRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIF-SF--G---AFARKPLLESASEWKVPTTFIYGR 334 (402)
T ss_pred HHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhc-cC--c---hhhcchHhhhcccCCCCEEEEEeC
Confidence 00000 00 00000000000000 00000000000000000 00 0 000001111235779999999999
Q ss_pred CCCccCchhHHHHHHhc--CCcEEEcCCCCCcccccChHHHHHHHHHHHhh
Q 015903 345 RDRWLNNDGVEDFCNDS--NHELIELPMAGHHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 345 ~D~~v~~~~~~~l~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 393 (398)
+|.+.+ ...+++.+.. ++++++++++||+++.|+|++|++.|.+|++.
T Consensus 335 ~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~ 384 (402)
T PLN02894 335 HDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRK 384 (402)
T ss_pred CCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHH
Confidence 998765 5555666555 68899999999999999999999999988875
No 40
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.94 E-value=1.8e-25 Score=202.61 Aligned_cols=118 Identities=21% Similarity=0.280 Sum_probs=99.3
Q ss_pred CCeEEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhh-cCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 015903 123 EIFRWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLS-KNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFV 201 (398)
Q Consensus 123 ~g~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~-~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l 201 (398)
+|.+++|...|++++++|||+||++++...+ .+...+. ++|+|+++|+||||.|...... ..++.+++++|+..++
T Consensus 13 ~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~dl~~l~ 89 (306)
T TIGR01249 13 DNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACL--EENTTWDLVADIEKLR 89 (306)
T ss_pred CCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCc--ccCCHHHHHHHHHHHH
Confidence 6789999999877788999999988765543 3334443 4899999999999999865432 2467889999999999
Q ss_pred HHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCc
Q 015903 202 NEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLT 243 (398)
Q Consensus 202 ~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 243 (398)
++++.++++++||||||.+++.++.++|++|+++|++++...
T Consensus 90 ~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 90 EKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 999999999999999999999999999999999999987543
No 41
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.94 E-value=2e-25 Score=238.45 Aligned_cols=256 Identities=15% Similarity=0.187 Sum_probs=160.8
Q ss_pred EEEEeccC-CCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHH
Q 015903 127 WFCVESGN-ADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQP----GYGFDYTLDEYVASLESFV 201 (398)
Q Consensus 127 l~~~~~g~-~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~----~~~~~~~~~~~~~dl~~~l 201 (398)
++|...|+ +++|+|||+||++++...|..++..|.++|+|+++|+||||.|..... .....++++++++++.+++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll 1439 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLI 1439 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHH
Confidence 45566665 346899999999999999999999998899999999999999975431 0112478999999999999
Q ss_pred HHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccC
Q 015903 202 NEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCG 281 (398)
Q Consensus 202 ~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (398)
++++.++++|+||||||.+++.++.++|++|+++|++++......... ..............+... ....+.....
T Consensus 1440 ~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~-~~~~~~~~~~~~~~l~~~---g~~~~~~~~~ 1515 (1655)
T PLN02980 1440 EHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVA-RKIRSAKDDSRARMLIDH---GLEIFLENWY 1515 (1655)
T ss_pred HHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHH-HHHHhhhhhHHHHHHHhh---hHHHHHHHhc
Confidence 999999999999999999999999999999999999986432211000 000000000000000000 0000000000
Q ss_pred CCC------CChhhhhhhhcccccCCCchhHHHHHHHhhh-hhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhH
Q 015903 282 PYQ------MKEDDAMVYRSPYLSSGSSGFALTAISKGMK-KQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGV 354 (398)
Q Consensus 282 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~ 354 (398)
... .............. ..... ........+. ........ ...+|++|+|+|+|++|..++ +.+
T Consensus 1516 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~~~~~~~~dl~~------~L~~I~~PtLlI~Ge~D~~~~-~~a 1586 (1655)
T PLN02980 1516 SGELWKSLRNHPHFNKIVASRLL-HKDVP-SLAKLLSDLSIGRQPSLWE------DLKQCDTPLLLVVGEKDVKFK-QIA 1586 (1655)
T ss_pred cHHHhhhhccCHHHHHHHHHHHh-cCCHH-HHHHHHHHhhhcccchHHH------HHhhCCCCEEEEEECCCCccH-HHH
Confidence 000 00000000000000 00000 0000000000 00000111 235679999999999999875 666
Q ss_pred HHHHHhc-C------------CcEEEcCCCCCcccccChHHHHHHHHHHHhhcc
Q 015903 355 EDFCNDS-N------------HELIELPMAGHHVQEDSGEELGKVISEIFRKRR 395 (398)
Q Consensus 355 ~~l~~~~-~------------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 395 (398)
+++.+.+ + +++++++++||.+++|+|+++++.|.+||++..
T Consensus 1587 ~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1587 QKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred HHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 7777766 4 479999999999999999999999999998754
No 42
>PRK05855 short chain dehydrogenase; Validated
Probab=99.93 E-value=2.9e-25 Score=219.79 Aligned_cols=264 Identities=17% Similarity=0.231 Sum_probs=161.2
Q ss_pred ccCCeEEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 015903 121 ADEIFRWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESF 200 (398)
Q Consensus 121 ~~~g~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~ 200 (398)
..+|.+++|...|++++|+|||+||++++...|..+.+.|.++|+|+++|+||||.|+.+... ..++.+++++|+..+
T Consensus 9 ~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~--~~~~~~~~a~dl~~~ 86 (582)
T PRK05855 9 SSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRT--AAYTLARLADDFAAV 86 (582)
T ss_pred eeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcc--cccCHHHHHHHHHHH
Confidence 358899999999987789999999999999999999999988999999999999999865432 257899999999999
Q ss_pred HHHhCCCc-EEEEEeCcChHHHHHHHHhC--CCccceEEEECCcCcccCC-----C----CchhHHHhHHhhhhhh----
Q 015903 201 VNEIANDK-VSLVVQGYFSPVVVKYASKH--KDKLKDLILLNPPLTAKHA-----N----LPSTLSIFSNFLLGEI---- 264 (398)
Q Consensus 201 l~~l~~~~-v~lvG~S~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~---- 264 (398)
++.++.++ ++|+||||||.+++.++.+. ++++..++.++++...... . .+.............+
T Consensus 87 i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (582)
T PRK05855 87 IDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYL 166 (582)
T ss_pred HHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHH
Confidence 99998765 99999999999998887662 3455555555443211000 0 0000000000000000
Q ss_pred ccCCccchhhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHH---HHhhccCCCCCCEEEE
Q 015903 265 FSQDPLRASDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEM---RTILMDKSWKIPTTVC 341 (398)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~Pvlii 341 (398)
+....... ..+.. .........+. .........................+.... .......++++|+++|
T Consensus 167 ~~~~~~~~--~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii 239 (582)
T PRK05855 167 FHLPVLPE--LLWRL----GLGRAWPRLLR-RVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLI 239 (582)
T ss_pred HhCCCCcH--HHhcc----chhhHHHHhhh-hccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEE
Confidence 00000000 00000 00000000000 000000000000000000000000000000 0001124579999999
Q ss_pred eeCCCCccCchhHHHHHHhc-CCcEEEcCCCCCcccccChHHHHHHHHHHHhhc
Q 015903 342 WGQRDRWLNNDGVEDFCNDS-NHELIELPMAGHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 342 ~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
+|++|.++|++..+.+.+.+ +.++++++ +||+++.|+|+++.+.|.+|+.+.
T Consensus 240 ~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 240 VPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAV 292 (582)
T ss_pred EeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHhc
Confidence 99999999999988888777 77888887 699999999999999999999864
No 43
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.93 E-value=5.7e-24 Score=194.06 Aligned_cols=254 Identities=16% Similarity=0.157 Sum_probs=156.7
Q ss_pred CCeEEEEEeccCC-CCCEEEEecCCCCCcc-ch-------------------------hhhhHhhhc-CCeEEEEcCCCC
Q 015903 123 EIFRWFCVESGNA-DNHTVLLIHGFPSQAY-SY-------------------------RKVLPVLSK-NYHAIAFDWLGF 174 (398)
Q Consensus 123 ~g~~l~~~~~g~~-~~p~vvllHG~~~~~~-~~-------------------------~~~~~~L~~-g~~Vi~~D~rG~ 174 (398)
+|.++++..+.+. .+.+||++||++++.. .| ..+++.|.+ ||.|+++|+|||
T Consensus 6 ~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGH 85 (332)
T TIGR01607 6 DGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGH 85 (332)
T ss_pred CCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEeccccc
Confidence 6777777776542 2459999999998775 21 356888877 999999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC------------------------CCcEEEEEeCcChHHHHHHHHhCCC
Q 015903 175 GFSEKPQPGYGFDYTLDEYVASLESFVNEIA------------------------NDKVSLVVQGYFSPVVVKYASKHKD 230 (398)
Q Consensus 175 G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~------------------------~~~v~lvG~S~Gg~ia~~~a~~~p~ 230 (398)
|+|.......++..+++++++|+..+++.+. ..+++|+||||||.+++.++.++++
T Consensus 86 G~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~ 165 (332)
T TIGR01607 86 GESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGK 165 (332)
T ss_pred CCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcc
Confidence 9998653322333578999999999998642 2479999999999999999876542
Q ss_pred --------ccceEEEECCcCcccCCC------CchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhhhhcc
Q 015903 231 --------KLKDLILLNPPLTAKHAN------LPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMVYRSP 296 (398)
Q Consensus 231 --------~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (398)
.++++|+++|........ .+.....+.. .+..+......... ... ...+........++
T Consensus 166 ~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~-~~~~~~p~~~~~~~-~~~-----~~~~~~~~~~~~Dp 238 (332)
T TIGR01607 166 SNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMN-FMSRVFPTFRISKK-IRY-----EKSPYVNDIIKFDK 238 (332)
T ss_pred ccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHH-HHHHHCCcccccCc-ccc-----ccChhhhhHHhcCc
Confidence 589999999876432111 0111111111 11111111110000 000 00000111111122
Q ss_pred cccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCC--CCCEEEEeeCCCCccCchhHHHHHHhc---CCcEEEcCCC
Q 015903 297 YLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSW--KIPTTVCWGQRDRWLNNDGVEDFCNDS---NHELIELPMA 371 (398)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~i~~~ 371 (398)
+..... .....+... ......+.. ...++ ++|+|+|+|++|.+++++.++.+.+.+ +.++++++++
T Consensus 239 ~~~~~~--~s~~~~~~l-----~~~~~~~~~--~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~ 309 (332)
T TIGR01607 239 FRYDGG--ITFNLASEL-----IKATDTLDC--DIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDM 309 (332)
T ss_pred cccCCc--ccHHHHHHH-----HHHHHHHHh--hHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCC
Confidence 211111 111111111 111111111 11223 799999999999999999999988776 6889999999
Q ss_pred CCccccc-ChHHHHHHHHHHHh
Q 015903 372 GHHVQED-SGEELGKVISEIFR 392 (398)
Q Consensus 372 gH~~~~e-~p~~~~~~i~~fl~ 392 (398)
+|.++.| +++++.+.|.+||+
T Consensus 310 ~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 310 DHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCCccCCCHHHHHHHHHHHhh
Confidence 9999877 47899999999986
No 44
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.92 E-value=6.6e-24 Score=171.27 Aligned_cols=220 Identities=17% Similarity=0.217 Sum_probs=152.7
Q ss_pred CEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCcEEEEE
Q 015903 138 HTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI---ANDKVSLVV 213 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvG 213 (398)
..|||+||+.|+....+.+.+.|.+ ||.|.++.+||||......- ..+.++|.+++.+..+.| +.+.|.++|
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl----~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~G 91 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFL----KTTPRDWWEDVEDGYRDLKEAGYDEIAVVG 91 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHh----cCCHHHHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 6999999999999999999999999 99999999999998764432 467888888888777766 567999999
Q ss_pred eCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhhh
Q 015903 214 QGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMVY 293 (398)
Q Consensus 214 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (398)
.||||.+++.+|..+| ++++|.++++........ ....+..... -+.. . .....+.....
T Consensus 92 lSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~--iie~~l~y~~--~~kk------------~--e~k~~e~~~~e 151 (243)
T COG1647 92 LSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRI--IIEGLLEYFR--NAKK------------Y--EGKDQEQIDKE 151 (243)
T ss_pred ecchhHHHHHHHhhCC--ccceeeecCCcccccchh--hhHHHHHHHH--Hhhh------------c--cCCCHHHHHHH
Confidence 9999999999999998 999999998876442211 1111111100 0000 0 00000000000
Q ss_pred hcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc---CCcEEEcCC
Q 015903 294 RSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS---NHELIELPM 370 (398)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~i~~ 370 (398)
...+... ... .. ..+....+...+ ....|..|+++++|++|+.+|.+.+..++..+ ..++.++++
T Consensus 152 ~~~~~~~--~~~----~~----~~~~~~i~~~~~--~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~ 219 (243)
T COG1647 152 MKSYKDT--PMT----TT----AQLKKLIKDARR--SLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEG 219 (243)
T ss_pred HHHhhcc--hHH----HH----HHHHHHHHHHHh--hhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEcc
Confidence 0000000 000 00 111111222111 12567999999999999999999999999998 889999999
Q ss_pred CCCcccc-cChHHHHHHHHHHHhh
Q 015903 371 AGHHVQE-DSGEELGKVISEIFRK 393 (398)
Q Consensus 371 ~gH~~~~-e~p~~~~~~i~~fl~~ 393 (398)
+||.+.. +..+.+.+.+.+||+.
T Consensus 220 SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 220 SGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CCceeecchhHHHHHHHHHHHhhC
Confidence 9999854 5779999999999974
No 45
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.92 E-value=1e-23 Score=182.08 Aligned_cols=248 Identities=17% Similarity=0.185 Sum_probs=162.4
Q ss_pred CCCCEEEEecCCCCCccchhhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCc
Q 015903 135 ADNHTVLLIHGFPSQAYSYRKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIA----NDK 208 (398)
Q Consensus 135 ~~~p~vvllHG~~~~~~~~~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~----~~~ 208 (398)
...|+++++||+-++...|..+...|++ +..|+++|.|.||.|..... .+.+.+++|+..+++..+ ..+
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~-----h~~~~ma~dv~~Fi~~v~~~~~~~~ 124 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITV-----HNYEAMAEDVKLFIDGVGGSTRLDP 124 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccc-----cCHHHHHHHHHHHHHHcccccccCC
Confidence 4579999999999999999999999998 89999999999999988774 679999999999999984 568
Q ss_pred EEEEEeCcCh-HHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhcc--CCccchhhhhhhccCCCCC
Q 015903 209 VSLVVQGYFS-PVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFS--QDPLRASDKALTSCGPYQM 285 (398)
Q Consensus 209 v~lvG~S~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 285 (398)
++++|||||| .+++..+...|+.+..+|+++-...............+........-. ........+.+... .
T Consensus 125 ~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~----~ 200 (315)
T KOG2382|consen 125 VVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEV----G 200 (315)
T ss_pred ceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHH----h
Confidence 9999999999 888888889999999999988543222111122222221111111110 00000011111110 0
Q ss_pred Chhhhhhhhccccc--CCCch----hHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHH
Q 015903 286 KEDDAMVYRSPYLS--SGSSG----FALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCN 359 (398)
Q Consensus 286 ~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~ 359 (398)
.......+....+. ..... .....+...+... . .. .....+.......|||++.|.++.+++.+.-.++.+
T Consensus 201 ~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~-~-~~-s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~ 277 (315)
T KOG2382|consen 201 FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEY-E-IL-SYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEK 277 (315)
T ss_pred cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHH-H-hh-cccccccccccccceeEEecCCCCCcChhHHHHHHH
Confidence 00111111111111 11110 1111111111110 0 00 000111114458999999999999999999999999
Q ss_pred hc-CCcEEEcCCCCCcccccChHHHHHHHHHHHhhc
Q 015903 360 DS-NHELIELPMAGHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 360 ~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
.+ .+++++++++||+++.|+|+++.+.|.+|+.++
T Consensus 278 ~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 278 IFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred hccchheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 88 999999999999999999999999999999865
No 46
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.92 E-value=4e-24 Score=169.23 Aligned_cols=240 Identities=16% Similarity=0.174 Sum_probs=166.8
Q ss_pred ccccccCCeEEEEEeccCCCCCEEEEecCCCCC-ccchhhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHH
Q 015903 117 SASQADEIFRWFCVESGNADNHTVLLIHGFPSQ-AYSYRKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEY 193 (398)
Q Consensus 117 ~~~~~~~g~~l~~~~~g~~~~p~vvllHG~~~~-~~~~~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 193 (398)
+.++.++|..+.|..+|.+. ..|++++|.-++ ...|.+.+..|.+ .+.|+++|.||+|.|.++....+. .-+..-
T Consensus 23 e~kv~vng~ql~y~~~G~G~-~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~-~ff~~D 100 (277)
T KOG2984|consen 23 ESKVHVNGTQLGYCKYGHGP-NYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEV-QFFMKD 100 (277)
T ss_pred hheeeecCceeeeeecCCCC-ceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchH-HHHHHh
Confidence 44455699999999999853 378888998554 4578888777666 699999999999999888764221 123444
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchh
Q 015903 194 VASLESFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRAS 273 (398)
Q Consensus 194 ~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (398)
+++...+++.|+.+++.++|+|=||..++..|+++++.|..+|+.++......... ..+.. .+..
T Consensus 101 a~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~-ma~kg--------------iRdv 165 (277)
T KOG2984|consen 101 AEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGA-MAFKG--------------IRDV 165 (277)
T ss_pred HHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhH-HHHhc--------------hHHH
Confidence 56667788899999999999999999999999999999999999987654331100 00000 0000
Q ss_pred hhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHh----------hccCCCCCCEEEEee
Q 015903 274 DKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTI----------LMDKSWKIPTTVCWG 343 (398)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~i~~Pvlii~G 343 (398)
.++.. .. ++++........ +.. ....+.+.+.+. ....+|+||+||+||
T Consensus 166 ~kWs~---------r~----R~P~e~~Yg~e~----f~~----~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG 224 (277)
T KOG2984|consen 166 NKWSA---------RG----RQPYEDHYGPET----FRT----QWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHG 224 (277)
T ss_pred hhhhh---------hh----cchHHHhcCHHH----HHH----HHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeC
Confidence 00000 00 001100000000 111 111111111111 234788999999999
Q ss_pred CCCCccCchhHHHHHHhc-CCcEEEcCCCCCcccccChHHHHHHHHHHHhhc
Q 015903 344 QRDRWLNNDGVEDFCNDS-NHELIELPMAGHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 344 ~~D~~v~~~~~~~l~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
++|++++..++-.+.... .+++.+.|.++|.+++..+++|+..+.+||+++
T Consensus 225 ~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 225 GKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred CcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 999999999998888888 899999999999999999999999999999875
No 47
>PLN02511 hydrolase
Probab=99.92 E-value=4.5e-24 Score=198.62 Aligned_cols=246 Identities=16% Similarity=0.191 Sum_probs=143.7
Q ss_pred CCCCEEEEecCCCCCccc-h-hhhhHh-hhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----C
Q 015903 135 ADNHTVLLIHGFPSQAYS-Y-RKVLPV-LSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIAN----D 207 (398)
Q Consensus 135 ~~~p~vvllHG~~~~~~~-~-~~~~~~-L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~----~ 207 (398)
.++|+||++||+++++.. | ..++.. +.+||+|+++|+||||+|...... .....+.+|+.+++++++. .
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~----~~~~~~~~Dl~~~i~~l~~~~~~~ 173 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQ----FYSASFTGDLRQVVDHVAGRYPSA 173 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcC----EEcCCchHHHHHHHHHHHHHCCCC
Confidence 457899999999876653 5 445544 455999999999999999764432 2234566777777777654 5
Q ss_pred cEEEEEeCcChHHHHHHHHhCCCc--cceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchh---hhhhhccCC
Q 015903 208 KVSLVVQGYFSPVVVKYASKHKDK--LKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRAS---DKALTSCGP 282 (398)
Q Consensus 208 ~v~lvG~S~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 282 (398)
+++++||||||.+++.++.++|++ |.++++++++...... ...+.......+...+........ ...+....
T Consensus 174 ~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~--~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~- 250 (388)
T PLN02511 174 NLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIA--DEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLG- 250 (388)
T ss_pred CEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHH--HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCC-
Confidence 899999999999999999999987 8888888876542100 000000000000000000000000 00000000
Q ss_pred CCCChhhhhhhhcccccCCCchhHHHHHHHh--hhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhH-HHHHH
Q 015903 283 YQMKEDDAMVYRSPYLSSGSSGFALTAISKG--MKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGV-EDFCN 359 (398)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~-~~l~~ 359 (398)
......... ..... ..+. ..+... .......+....+......+|++|+|+|+|++|+++|.+.. ..+.+
T Consensus 251 ~~~~~~~~~--~~~~~----~~fd-~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~ 323 (388)
T PLN02511 251 GEYNIPLVA--NAKTV----RDFD-DGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIK 323 (388)
T ss_pred CccCHHHHH--hCCCH----HHHH-HhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHh
Confidence 000000000 00000 0000 000000 00111222222222334567899999999999999998764 44555
Q ss_pred hc-CCcEEEcCCCCCcccccChHH------HHHHHHHHHhhc
Q 015903 360 DS-NHELIELPMAGHHVQEDSGEE------LGKVISEIFRKR 394 (398)
Q Consensus 360 ~~-~~~~~~i~~~gH~~~~e~p~~------~~~~i~~fl~~~ 394 (398)
.. ++++++++++||..++|+|+. +.+.|.+||+..
T Consensus 324 ~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 324 ANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred cCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHH
Confidence 56 899999999999999999875 488999998753
No 48
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.91 E-value=1.6e-22 Score=186.67 Aligned_cols=271 Identities=11% Similarity=0.062 Sum_probs=159.9
Q ss_pred CCeEEEEEeccCCC---CCEEEEecCCCCCcc-------------chhhhh---Hhhhc-CCeEEEEcCCCCCCCCCC--
Q 015903 123 EIFRWFCVESGNAD---NHTVLLIHGFPSQAY-------------SYRKVL---PVLSK-NYHAIAFDWLGFGFSEKP-- 180 (398)
Q Consensus 123 ~g~~l~~~~~g~~~---~p~vvllHG~~~~~~-------------~~~~~~---~~L~~-g~~Vi~~D~rG~G~S~~~-- 180 (398)
..+++.|+.+|..+ .+.||++|++.+++. -|..++ ..|.. .|.||++|..|-|.|..+
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 77899999999633 479999999987542 155555 34544 899999999998753221
Q ss_pred -----C---CC----C---CCCCCHHHHHHHHHHHHHHhCCCcEE-EEEeCcChHHHHHHHHhCCCccceEEEECCcCcc
Q 015903 181 -----Q---PG----Y---GFDYTLDEYVASLESFVNEIANDKVS-LVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 181 -----~---~~----~---~~~~~~~~~~~dl~~~l~~l~~~~v~-lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 244 (398)
. +. + ...++++++++++..++++++++++. ++||||||++++.+|.++|++|+++|++++....
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~ 198 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQN 198 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCC
Confidence 0 00 0 11478999999999999999999986 9999999999999999999999999999875432
Q ss_pred cCCCCchhHHHhHHhhhhh--hc------cCCccchhhhhhhccCCCCCChhh-hhhhhccc-cc-----CCCchhHHHH
Q 015903 245 KHANLPSTLSIFSNFLLGE--IF------SQDPLRASDKALTSCGPYQMKEDD-AMVYRSPY-LS-----SGSSGFALTA 309 (398)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~-----~~~~~~~~~~ 309 (398)
...............+... +. ...+...+..............+. ...+.+.. .. .....+....
T Consensus 199 ~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~ 278 (389)
T PRK06765 199 DAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEK 278 (389)
T ss_pred ChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHH
Confidence 2110001111111111000 00 000100000000000000000000 00000000 00 0000000000
Q ss_pred HHHhh------hhhHHHHH---HHHH----------HhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-----CCcE
Q 015903 310 ISKGM------KKQLKQYV---EEMR----------TILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-----NHEL 365 (398)
Q Consensus 310 ~~~~~------~~~~~~~~---~~~~----------~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-----~~~~ 365 (398)
+.... ..+...++ ..+. -...+.+|++|+|+|+|++|.++|++..+++.+.+ ++++
T Consensus 279 yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l 358 (389)
T PRK06765 279 EINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEV 358 (389)
T ss_pred HHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEE
Confidence 00000 00000000 0000 00122467999999999999999999999888877 3788
Q ss_pred EEcCC-CCCcccccChHHHHHHHHHHHhh
Q 015903 366 IELPM-AGHHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 366 ~~i~~-~gH~~~~e~p~~~~~~i~~fl~~ 393 (398)
+++++ +||..++|+|+++++.|.+||++
T Consensus 359 ~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 359 YEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 99985 89999999999999999999976
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.90 E-value=8e-22 Score=184.28 Aligned_cols=215 Identities=16% Similarity=0.213 Sum_probs=137.9
Q ss_pred CCCCEEEEecCCCCCc-cchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCcE
Q 015903 135 ADNHTVLLIHGFPSQA-YSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI---ANDKV 209 (398)
Q Consensus 135 ~~~p~vvllHG~~~~~-~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v 209 (398)
+..|+||++||+++.. ..|..+.+.|.+ ||+|+++|+||+|.|..... ..+......++.+.+... +.+++
T Consensus 192 ~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~----~~d~~~~~~avld~l~~~~~vd~~ri 267 (414)
T PRK05077 192 GPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL----TQDSSLLHQAVLNALPNVPWVDHTRV 267 (414)
T ss_pred CCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc----cccHHHHHHHHHHHHHhCcccCcccE
Confidence 3456777766766553 467778888877 99999999999999965321 233444555555555544 56799
Q ss_pred EEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhh
Q 015903 210 SLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDD 289 (398)
Q Consensus 210 ~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (398)
.++||||||++++.+|..+|++|+++|+++++...... ............. .. +............
T Consensus 268 ~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~-~~~~~~~~p~~~~-~~-----------la~~lg~~~~~~~- 333 (414)
T PRK05077 268 AAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLT-DPKRQQQVPEMYL-DV-----------LASRLGMHDASDE- 333 (414)
T ss_pred EEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhc-chhhhhhchHHHH-HH-----------HHHHhCCCCCChH-
Confidence 99999999999999999999999999999987632100 0000000000000 00 0000000000000
Q ss_pred hhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCcEEEc
Q 015903 290 AMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELIEL 368 (398)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~i 368 (398)
.+...+ ..+....... ...++++|+|+|+|++|+++|++.++.+.+.. +.+++++
T Consensus 334 -------------------~l~~~l----~~~sl~~~~~-l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i 389 (414)
T PRK05077 334 -------------------ALRVEL----NRYSLKVQGL-LGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEI 389 (414)
T ss_pred -------------------HHHHHh----hhccchhhhh-hccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEc
Confidence 000000 0000000000 01467999999999999999999999888888 9999999
Q ss_pred CCCCCcccccChHHHHHHHHHHHhhc
Q 015903 369 PMAGHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 369 ~~~gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
|++ ++.+.++++.+.|.+||+++
T Consensus 390 ~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 390 PFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred cCC---CccCCHHHHHHHHHHHHHHH
Confidence 985 45679999999999999875
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.89 E-value=3.2e-22 Score=182.57 Aligned_cols=246 Identities=11% Similarity=0.091 Sum_probs=138.6
Q ss_pred CCCEEEEecCCCCCccc--hhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEE
Q 015903 136 DNHTVLLIHGFPSQAYS--YRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLV 212 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~--~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lv 212 (398)
++|+||++||++++... +..++..|.+ ||+|+++|+||||.+.............+|+...+..+.+.++.++++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~v 136 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAV 136 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEE
Confidence 46899999999877543 3567777877 99999999999998754322111112244444444444455667789999
Q ss_pred EeCcChHHHHHHHHhCCCc--cceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCC-CCChhh
Q 015903 213 VQGYFSPVVVKYASKHKDK--LKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPY-QMKEDD 289 (398)
Q Consensus 213 G~S~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 289 (398)
||||||.+++.++.++++. +.++|+++++....... ..+.......+...+.................. ....+.
T Consensus 137 G~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 214 (324)
T PRK10985 137 GYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACS--YRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQ 214 (324)
T ss_pred EecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHH--HHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHH
Confidence 9999999999988887654 89999999876533110 000000000111111000000000000000000 000000
Q ss_pred h------hhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-C
Q 015903 290 A------MVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-N 362 (398)
Q Consensus 290 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~ 362 (398)
. ..+.+.... ...++ .....+...........+|++|+++|+|++|++++++..+.+.+.. +
T Consensus 215 ~~~~~~~~~fd~~~~~-~~~g~----------~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~ 283 (324)
T PRK10985 215 LKSVRRLREFDDLITA-RIHGF----------ADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPN 283 (324)
T ss_pred HhcCCcHHHHhhhhee-ccCCC----------CCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCC
Confidence 0 000000000 00000 0111111111112223577999999999999999988887776666 8
Q ss_pred CcEEEcCCCCCcccccCh-----HHHHHHHHHHHhhc
Q 015903 363 HELIELPMAGHHVQEDSG-----EELGKVISEIFRKR 394 (398)
Q Consensus 363 ~~~~~i~~~gH~~~~e~p-----~~~~~~i~~fl~~~ 394 (398)
.++++++++||+.++|.. ....+.+.+|++..
T Consensus 284 ~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 284 VEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred eEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 899999999999988742 35566777887653
No 51
>PRK13604 luxD acyl transferase; Provisional
Probab=99.88 E-value=5e-21 Score=167.56 Aligned_cols=205 Identities=20% Similarity=0.279 Sum_probs=127.9
Q ss_pred CCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCcEEE
Q 015903 137 NHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGF-GFSEKPQPGYGFDYTLDEYVASLESFVNEI---ANDKVSL 211 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~-G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~l 211 (398)
.++||++||+++....+..+++.|++ ||.|+.+|+||+ |.|++.... .+.....+|+..+++++ +.+++.|
T Consensus 37 ~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~----~t~s~g~~Dl~aaid~lk~~~~~~I~L 112 (307)
T PRK13604 37 NNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE----FTMSIGKNSLLTVVDWLNTRGINNLGL 112 (307)
T ss_pred CCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc----CcccccHHHHHHHHHHHHhcCCCceEE
Confidence 47999999999987778999999988 999999999988 899765532 23333456776666655 4568999
Q ss_pred EEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhh
Q 015903 212 VVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAM 291 (398)
Q Consensus 212 vG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (398)
+||||||.+++..|... .++++|+.+|..... ..+.. .+...+...+... .+.. .
T Consensus 113 iG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~-----d~l~~----~~~~~~~~~p~~~------------lp~~-~- 167 (307)
T PRK13604 113 IAASLSARIAYEVINEI--DLSFLITAVGVVNLR-----DTLER----ALGYDYLSLPIDE------------LPED-L- 167 (307)
T ss_pred EEECHHHHHHHHHhcCC--CCCEEEEcCCcccHH-----HHHHH----hhhcccccCcccc------------cccc-c-
Confidence 99999999997777643 499999999876432 11111 0000000000000 0000 0
Q ss_pred hhhcccccCCCchhHHHHHHHh-hhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc---CCcEEE
Q 015903 292 VYRSPYLSSGSSGFALTAISKG-MKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS---NHELIE 367 (398)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~ 367 (398)
.+. + .......+... ...++. ...+.+....++++|+|+|||++|.+||.+.++++.+.+ ++++++
T Consensus 168 d~~------g-~~l~~~~f~~~~~~~~~~---~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~ 237 (307)
T PRK13604 168 DFE------G-HNLGSEVFVTDCFKHGWD---TLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYS 237 (307)
T ss_pred ccc------c-ccccHHHHHHHHHhcCcc---ccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEE
Confidence 000 0 00000001110 000001 001111122345899999999999999999999999987 789999
Q ss_pred cCCCCCcccccChH
Q 015903 368 LPMAGHHVQEDSGE 381 (398)
Q Consensus 368 i~~~gH~~~~e~p~ 381 (398)
++|++|.+. |++-
T Consensus 238 i~Ga~H~l~-~~~~ 250 (307)
T PRK13604 238 LIGSSHDLG-ENLV 250 (307)
T ss_pred eCCCccccC-cchH
Confidence 999999765 4543
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.87 E-value=2.3e-20 Score=166.11 Aligned_cols=227 Identities=17% Similarity=0.231 Sum_probs=134.5
Q ss_pred CCCEEEEecCCCC----CccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----C
Q 015903 136 DNHTVLLIHGFPS----QAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI-----A 205 (398)
Q Consensus 136 ~~p~vvllHG~~~----~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l-----~ 205 (398)
+++.||++||++. +...|..+++.|++ ||+|+++|+||||.|.... .+.+++.+|+.++++.+ +
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~------~~~~~~~~d~~~~~~~l~~~~~g 98 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN------LGFEGIDADIAAAIDAFREAAPH 98 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC------CCHHHHHHHHHHHHHHHHhhCCC
Confidence 3568888888763 33346677888887 9999999999999987432 35677888888888776 4
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCC
Q 015903 206 NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQM 285 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (398)
.++++++|||+||.+++.+|.. +++|+++|+++|.............. .......... ......+ .+....
T Consensus 99 ~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~--~g~~~~ 169 (274)
T TIGR03100 99 LRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIR---HYYLGQLLSA---DFWRKLL--SGEVNL 169 (274)
T ss_pred CCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHH---HHHHHHHhCh---HHHHHhc--CCCccH
Confidence 5789999999999999999865 46899999999875433211111111 1111111110 0000000 000000
Q ss_pred Chhhhhhhhcc---cccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhH------HH
Q 015903 286 KEDDAMVYRSP---YLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGV------ED 356 (398)
Q Consensus 286 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~------~~ 356 (398)
..... .+... +....... .. .... ......+ .++++|+++++|+.|...+ ... ..
T Consensus 170 ~~~~~-~~~~~~~~~~~~~~~~-~~----~~~~---~~~~~~l------~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~ 233 (274)
T TIGR03100 170 GSSLR-GLGDALLKARQKGDEV-AH----GGLA---ERMKAGL------ERFQGPVLFILSGNDLTAQ-EFADSVLGEPA 233 (274)
T ss_pred HHHHH-HHHHHHHhhhhcCCCc-cc----chHH---HHHHHHH------HhcCCcEEEEEcCcchhHH-HHHHHhccChh
Confidence 00000 00000 00000000 00 0000 1111111 2448999999999998864 222 34
Q ss_pred HHHhc---CCcEEEcCCCCCccccc-ChHHHHHHHHHHHhh
Q 015903 357 FCNDS---NHELIELPMAGHHVQED-SGEELGKVISEIFRK 393 (398)
Q Consensus 357 l~~~~---~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 393 (398)
+.+.+ +++++++++++|++..+ .++++.+.|.+||++
T Consensus 234 ~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 234 WRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred hHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 44433 78899999999998554 569999999999963
No 53
>PRK10566 esterase; Provisional
Probab=99.87 E-value=7.6e-21 Score=167.48 Aligned_cols=215 Identities=13% Similarity=0.082 Sum_probs=129.8
Q ss_pred EEEEEeccC--CCCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCC---CHHHHHHHHHH
Q 015903 126 RWFCVESGN--ADNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDY---TLDEYVASLES 199 (398)
Q Consensus 126 ~l~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~---~~~~~~~dl~~ 199 (398)
.++|.+.+. +..|+||++||++++...|..+...|++ ||.|+++|+||+|.+........... ...+..+|+.+
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPT 93 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHH
Confidence 455666543 3468999999999998889989999987 99999999999997633211100000 01122344444
Q ss_pred HHHHh------CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchh
Q 015903 200 FVNEI------ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRAS 273 (398)
Q Consensus 200 ~l~~l------~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (398)
+++.+ +.++++++|||+||.+++.++.++|+....++++++... ..+.... +.....
T Consensus 94 ~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~----~~~~~~--- 156 (249)
T PRK10566 94 LRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF----------TSLARTL----FPPLIP--- 156 (249)
T ss_pred HHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH----------HHHHHHh----cccccc---
Confidence 44432 456899999999999999999988864444444443211 0000000 000000
Q ss_pred hhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCC-CCCEEEEeeCCCCccCch
Q 015903 274 DKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSW-KIPTTVCWGQRDRWLNND 352 (398)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~Pvlii~G~~D~~v~~~ 352 (398)
... . . ... +.... .............++ ++|+|+|+|++|.++|++
T Consensus 157 ------------~~~--~---------~--~~~---~~~~~-----~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~ 203 (249)
T PRK10566 157 ------------ETA--A---------Q--QAE---FNNIV-----APLAEWEVTHQLEQLADRPLLLWHGLADDVVPAA 203 (249)
T ss_pred ------------ccc--c---------c--HHH---HHHHH-----HHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHH
Confidence 000 0 0 000 00000 000000000111233 699999999999999999
Q ss_pred hHHHHHHhc---C----CcEEEcCCCCCcccccChHHHHHHHHHHHhhc
Q 015903 353 GVEDFCNDS---N----HELIELPMAGHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 353 ~~~~l~~~~---~----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
.++++.+.+ + .++++++++||.+. .+..+.+.+||+++
T Consensus 204 ~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 204 ESLRLQQALRERGLDKNLTCLWEPGVRHRIT----PEALDAGVAFFRQH 248 (249)
T ss_pred HHHHHHHHHHhcCCCcceEEEecCCCCCccC----HHHHHHHHHHHHhh
Confidence 999998877 1 46778999999863 34678899999864
No 54
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.87 E-value=2.8e-22 Score=174.21 Aligned_cols=216 Identities=20% Similarity=0.284 Sum_probs=130.6
Q ss_pred CeEEEEcCCCCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECC
Q 015903 164 YHAIAFDWLGFGFSEK---PQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNP 240 (398)
Q Consensus 164 ~~Vi~~D~rG~G~S~~---~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 240 (398)
|+|+++|+||+|.|++ ... ..++.+++++++..+++.++.++++++||||||.+++.+|.++|++|+++|++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~ 77 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDF---PDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISP 77 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGS---CTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESE
T ss_pred CEEEEEeCCCCCCCCCCccCCc---ccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEee
Confidence 7899999999999995 332 2689999999999999999999999999999999999999999999999999998
Q ss_pred cC----cccCCCCch-hHH-HhHHhhhhhhccCCccchhhhhh---hccCCCCCChhhhhhhhcccccCCCchhHHHHHH
Q 015903 241 PL----TAKHANLPS-TLS-IFSNFLLGEIFSQDPLRASDKAL---TSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAIS 311 (398)
Q Consensus 241 ~~----~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (398)
+. ......... ... .............. ........ ...................+.... .... ..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~ 152 (230)
T PF00561_consen 78 PPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPI-KPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFA-ETDA---FD 152 (230)
T ss_dssp SSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTC-HHHH---HH
T ss_pred eccchhhhhHHHHhhhhhhhhHHHhhhccccccc-hhhhhhhhhheeeccCccccchhhccchhhhhHHH-HHHH---Hh
Confidence 62 000000000 000 00000000000000 00000000 000000000000000000000000 0000 00
Q ss_pred HhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCcEEEcCCCCCcccccChHHHHHHHH
Q 015903 312 KGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELIELPMAGHHVQEDSGEELGKVIS 388 (398)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~ 388 (398)
.... ................++++|+++++|++|.++|++....+.+.+ +.++++++++||+.++++++++++.|.
T Consensus 153 ~~~~-~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 153 NMFW-NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHH-HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred hhcc-ccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 0000 011111222222234678999999999999999999999988888 999999999999999999999999875
No 55
>PRK11071 esterase YqiA; Provisional
Probab=99.87 E-value=1e-20 Score=158.19 Aligned_cols=182 Identities=16% Similarity=0.179 Sum_probs=126.3
Q ss_pred CEEEEecCCCCCccchhh--hhHhhhc---CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEE
Q 015903 138 HTVLLIHGFPSQAYSYRK--VLPVLSK---NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLV 212 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~--~~~~L~~---g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lv 212 (398)
|+||++||++++...|.. +.+.+.+ +|+|+++|+||++ +++++++.++++.++.++++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCCCeEEE
Confidence 689999999999999974 3466654 7999999999874 4678899999999999999999
Q ss_pred EeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhh
Q 015903 213 VQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMV 292 (398)
Q Consensus 213 G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (398)
||||||.+++.+|.++|. .+|+++|+..+. ..+... .. ... .+. .
T Consensus 67 G~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~--------~~~~~~-~~----~~~-----------~~~--~------ 111 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML---PAVVVNPAVRPF--------ELLTDY-LG----ENE-----------NPY--T------ 111 (190)
T ss_pred EECHHHHHHHHHHHHcCC---CEEEECCCCCHH--------HHHHHh-cC----Ccc-----------ccc--C------
Confidence 999999999999999983 468888864311 000000 00 000 000 0
Q ss_pred hhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhh-ccCCCCCCEEEEeeCCCCccCchhHHHHHHhcCCcEEEcCCC
Q 015903 293 YRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTIL-MDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDSNHELIELPMA 371 (398)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~i~~~ 371 (398)
...+. +. ...+.+..... ..-+..+|+++++|++|+++|.+.+.++++. ++.++++|+
T Consensus 112 -~~~~~-----------~~-------~~~~~d~~~~~~~~i~~~~~v~iihg~~De~V~~~~a~~~~~~--~~~~~~~gg 170 (190)
T PRK11071 112 -GQQYV-----------LE-------SRHIYDLKVMQIDPLESPDLIWLLQQTGDEVLDYRQAVAYYAA--CRQTVEEGG 170 (190)
T ss_pred -CCcEE-----------Ec-------HHHHHHHHhcCCccCCChhhEEEEEeCCCCcCCHHHHHHHHHh--cceEEECCC
Confidence 00000 00 01111111110 0012478889999999999999999999995 577788999
Q ss_pred CCcccccChHHHHHHHHHHHh
Q 015903 372 GHHVQEDSGEELGKVISEIFR 392 (398)
Q Consensus 372 gH~~~~e~p~~~~~~i~~fl~ 392 (398)
+|.+ .+.+++.+.|.+|+.
T Consensus 171 dH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 171 NHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred Ccch--hhHHHhHHHHHHHhc
Confidence 9987 455889999999975
No 56
>PLN02872 triacylglycerol lipase
Probab=99.87 E-value=7e-21 Score=175.71 Aligned_cols=282 Identities=16% Similarity=0.146 Sum_probs=166.2
Q ss_pred Cccccccccccc-cCCeEEEEEecc-------CCCCCEEEEecCCCCCccchh------hhhHhhhc-CCeEEEEcCCCC
Q 015903 110 IFGLDLGSASQA-DEIFRWFCVESG-------NADNHTVLLIHGFPSQAYSYR------KVLPVLSK-NYHAIAFDWLGF 174 (398)
Q Consensus 110 ~~G~~~~~~~~~-~~g~~l~~~~~g-------~~~~p~vvllHG~~~~~~~~~------~~~~~L~~-g~~Vi~~D~rG~ 174 (398)
..|++.+.+.++ .||+.+...... ...+|+||++||++.++..|. .+...|++ ||+|+++|+||+
T Consensus 39 ~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 39 PAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred HcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccc
Confidence 467777777776 688887766532 123689999999998888873 23445766 999999999998
Q ss_pred CCCCCC-----CCCCCCCCCHHHHH-HHHHHHHHHh---CCCcEEEEEeCcChHHHHHHHHhCCC---ccceEEEECCcC
Q 015903 175 GFSEKP-----QPGYGFDYTLDEYV-ASLESFVNEI---ANDKVSLVVQGYFSPVVVKYASKHKD---KLKDLILLNPPL 242 (398)
Q Consensus 175 G~S~~~-----~~~~~~~~~~~~~~-~dl~~~l~~l---~~~~v~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 242 (398)
+.|... .....+.+++++++ .|+.++++++ ..++++++|||+||.+++.++ .+|+ +|+.+++++|..
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~ 197 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPIS 197 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchh
Confidence 865321 11111246788888 7999999986 347899999999999998555 5776 688999999876
Q ss_pred cccCCCCchhHHHhH---HhhhhhhccCCccch----hhhhhh-ccCC---------------CCCChhhhhhhhccccc
Q 015903 243 TAKHANLPSTLSIFS---NFLLGEIFSQDPLRA----SDKALT-SCGP---------------YQMKEDDAMVYRSPYLS 299 (398)
Q Consensus 243 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~-~~~~---------------~~~~~~~~~~~~~~~~~ 299 (398)
.......+....... ..++ ..+....+.. ...... .|.. ..+.......+.... .
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~-p 275 (395)
T PLN02872 198 YLDHVTAPLVLRMVFMHLDQMV-VAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYE-P 275 (395)
T ss_pred hhccCCCHHHHHHHHHhHHHHH-HHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcC-C
Confidence 543322222111000 0000 0011110000 000000 0100 001110000110000 0
Q ss_pred CCCchhHHHHHHHhhh------h------hHHHHHHHHHHhhccCCC--CCCEEEEeeCCCCccCchhHHHHHHhc-C-C
Q 015903 300 SGSSGFALTAISKGMK------K------QLKQYVEEMRTILMDKSW--KIPTTVCWGQRDRWLNNDGVEDFCNDS-N-H 363 (398)
Q Consensus 300 ~~~~~~~~~~~~~~~~------~------~~~~~~~~~~~~~~~~~i--~~Pvlii~G~~D~~v~~~~~~~l~~~~-~-~ 363 (398)
.+..-..+.-+..... . +...+-....+.+...+| ++|+++++|++|.+++++.++.+.+.+ + .
T Consensus 276 agtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~ 355 (395)
T PLN02872 276 HPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKP 355 (395)
T ss_pred CcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCcc
Confidence 0110000000001000 0 001111111223455677 589999999999999999999999998 4 6
Q ss_pred cEEEcCCCCCc---ccccChHHHHHHHHHHHhhc
Q 015903 364 ELIELPMAGHH---VQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 364 ~~~~i~~~gH~---~~~e~p~~~~~~i~~fl~~~ 394 (398)
+++.+++.||. ...+.++++++.|.+||++.
T Consensus 356 ~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 356 ELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred EEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 88899999996 34588999999999999864
No 57
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.86 E-value=2.3e-21 Score=190.57 Aligned_cols=207 Identities=18% Similarity=0.286 Sum_probs=140.5
Q ss_pred CEEEEecCCCCCccc--hhhhhHhhhc-CCeEEEEcCCCCCCCCCC-----CCCCCCCCCHHHHHHHHHHHHHHh---CC
Q 015903 138 HTVLLIHGFPSQAYS--YRKVLPVLSK-NYHAIAFDWLGFGFSEKP-----QPGYGFDYTLDEYVASLESFVNEI---AN 206 (398)
Q Consensus 138 p~vvllHG~~~~~~~--~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~-----~~~~~~~~~~~~~~~dl~~~l~~l---~~ 206 (398)
|+||++||++..... |....+.|+. ||.|+.+|+||.+..... ...++ ....+|+.+.+. ++... +.
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g-~~~~~D~~~~~~-~l~~~~~~d~ 472 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWG-GVDLEDLIAAVD-ALVKLPLVDP 472 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccC-CccHHHHHHHHH-HHHhCCCcCh
Confidence 899999999855444 5667777777 999999999988664322 11111 234566666666 44443 34
Q ss_pred CcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCC
Q 015903 207 DKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMK 286 (398)
Q Consensus 207 ~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (398)
++++|+|||+||+++++.+.+.| .+++.+...+....... +.. ......
T Consensus 473 ~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~--------~~~-------~~~~~~--------------- 521 (620)
T COG1506 473 ERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLY--------FGE-------STEGLR--------------- 521 (620)
T ss_pred HHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhh--------ccc-------cchhhc---------------
Confidence 58999999999999999999988 77777777665432200 000 000000
Q ss_pred hhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-----
Q 015903 287 EDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS----- 361 (398)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~----- 361 (398)
..+... ...... ....+...+++....+|++|+|+|||++|..||.+++.++.+++
T Consensus 522 ----~~~~~~--------------~~~~~~-~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~ 582 (620)
T COG1506 522 ----FDPEEN--------------GGGPPE-DREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGK 582 (620)
T ss_pred ----CCHHHh--------------CCCccc-ChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCc
Confidence 000000 000000 12334455566666788999999999999999999999999988
Q ss_pred CCcEEEcCCCCCcccc-cChHHHHHHHHHHHhhccc
Q 015903 362 NHELIELPMAGHHVQE-DSGEELGKVISEIFRKRRL 396 (398)
Q Consensus 362 ~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~~ 396 (398)
+++++++|+.||.+.. ++...+.+.+.+|++++-.
T Consensus 583 ~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 583 PVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred eEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 7899999999999854 6677889999999987643
No 58
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.86 E-value=6.3e-21 Score=158.97 Aligned_cols=245 Identities=18% Similarity=0.276 Sum_probs=149.4
Q ss_pred EEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 015903 126 RWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNE 203 (398)
Q Consensus 126 ~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 203 (398)
+.++.-.....+|.++++||+|.+.-.|..++..|.. ..+|+++|+||||.+....+. +.+.+.+++|+.+++++
T Consensus 63 n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~---dlS~eT~~KD~~~~i~~ 139 (343)
T KOG2564|consen 63 NVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENED---DLSLETMSKDFGAVIKE 139 (343)
T ss_pred EEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChh---hcCHHHHHHHHHHHHHH
Confidence 4444333245689999999999999999999988877 788999999999999877764 68999999999999998
Q ss_pred h---CCCcEEEEEeCcChHHHHHHHHhC--CCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhh
Q 015903 204 I---ANDKVSLVVQGYFSPVVVKYASKH--KDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALT 278 (398)
Q Consensus 204 l---~~~~v~lvG~S~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (398)
+ ...+++||||||||.||...|... |. +.++++++-+-.... ..+.....++.. ....+...+..+.
T Consensus 140 ~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAm----eAL~~m~~fL~~---rP~~F~Si~~Ai~ 211 (343)
T KOG2564|consen 140 LFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAM----EALNSMQHFLRN---RPKSFKSIEDAIE 211 (343)
T ss_pred HhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHH----HHHHHHHHHHhc---CCccccchhhHHH
Confidence 6 356899999999999999887653 65 889999886421110 000000000000 0001111111111
Q ss_pred cc---------------CCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEee
Q 015903 279 SC---------------GPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWG 343 (398)
Q Consensus 279 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G 343 (398)
.. .+..+.....- ..|.-..+... .. .-...+.+.++..+ -...+|-++|..
T Consensus 212 W~v~sg~~Rn~~SArVsmP~~~~~~~eG---h~yvwrtdL~k----te----~YW~gWF~gLS~~F--l~~p~~klLilA 278 (343)
T KOG2564|consen 212 WHVRSGQLRNRDSARVSMPSQLKQCEEG---HCYVWRTDLEK----TE----QYWKGWFKGLSDKF--LGLPVPKLLILA 278 (343)
T ss_pred HHhccccccccccceEecchheeeccCC---CcEEEEeeccc----cc----hhHHHHHhhhhhHh--hCCCccceeEEe
Confidence 00 00001100000 00000000000 00 11122223232221 234788888888
Q ss_pred CCCCccCchhHHHHHHhcCCcEEEcCCCCCcccccChHHHHHHHHHHHhhccc
Q 015903 344 QRDRWLNNDGVEDFCNDSNHELIELPMAGHHVQEDSGEELGKVISEIFRKRRL 396 (398)
Q Consensus 344 ~~D~~v~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 396 (398)
..|..-..-..-++.. ..++.+++.+||+.+.+.|..++..+..|+.+++.
T Consensus 279 g~d~LDkdLtiGQMQG--k~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~~ 329 (343)
T KOG2564|consen 279 GVDRLDKDLTIGQMQG--KFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNRF 329 (343)
T ss_pred cccccCcceeeeeecc--ceeeeeecccCceeccCCcchHHHHHHHHHhhhcc
Confidence 8886533211222222 56899999999999999999999999999998764
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.85 E-value=4.3e-20 Score=170.49 Aligned_cols=264 Identities=16% Similarity=0.198 Sum_probs=144.9
Q ss_pred CCeEEEEEecc--CCCCCEEEEecCCCCCccch-----hhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHH
Q 015903 123 EIFRWFCVESG--NADNHTVLLIHGFPSQAYSY-----RKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYV 194 (398)
Q Consensus 123 ~g~~l~~~~~g--~~~~p~vvllHG~~~~~~~~-----~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 194 (398)
+++.++..... ...+++||++||+..+...+ ..+++.|.+ ||+|+++|++|+|.+... .+++++.
T Consensus 46 ~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~-------~~~~d~~ 118 (350)
T TIGR01836 46 DKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY-------LTLDDYI 118 (350)
T ss_pred CcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc-------CCHHHHH
Confidence 44555443321 23356899999986555444 578888888 999999999999987532 3456655
Q ss_pred HH-H----HHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCch-hH-HHhHHhhhhhhccC
Q 015903 195 AS-L----ESFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPS-TL-SIFSNFLLGEIFSQ 267 (398)
Q Consensus 195 ~d-l----~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ 267 (398)
.+ + ..+.+..+.++++++||||||.+++.++..+|++|+++|+++++.......... .. ...........+..
T Consensus 119 ~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (350)
T TIGR01836 119 NGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGN 198 (350)
T ss_pred HHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCC
Confidence 33 4 444455677899999999999999999999999999999999987653211100 00 00000000000000
Q ss_pred CccchhhhhhhccCCCC-------------CChhhhhhhhc--ccccC--CCchhHHHHHHHhhhhhHHHHHHHH---HH
Q 015903 268 DPLRASDKALTSCGPYQ-------------MKEDDAMVYRS--PYLSS--GSSGFALTAISKGMKKQLKQYVEEM---RT 327 (398)
Q Consensus 268 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 327 (398)
.+.......+....+.. ...+....+.. .+... .........+...+.....-....+ ..
T Consensus 199 ~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~ 278 (350)
T TIGR01836 199 IPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGR 278 (350)
T ss_pred CCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCE
Confidence 00000000000000000 00000000000 00000 0000000000000000000000000 00
Q ss_pred hhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc---CCcEEEcCCCCCcccccC---hHHHHHHHHHHHhhc
Q 015903 328 ILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS---NHELIELPMAGHHVQEDS---GEELGKVISEIFRKR 394 (398)
Q Consensus 328 ~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~i~~~gH~~~~e~---p~~~~~~i~~fl~~~ 394 (398)
.....++++|+++++|++|.++|++.++.+.+.+ +.++++++ +||..++.+ ++++.+.|.+||.++
T Consensus 279 ~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 279 KVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQAR 350 (350)
T ss_pred EccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHhC
Confidence 0123467999999999999999999999999987 45677777 699886543 489999999999763
No 60
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.83 E-value=4.6e-19 Score=168.09 Aligned_cols=248 Identities=13% Similarity=0.061 Sum_probs=144.1
Q ss_pred EEEEeccC-CCCCEEEEecCCCCCccchh-----hhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 015903 127 WFCVESGN-ADNHTVLLIHGFPSQAYSYR-----KVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLES 199 (398)
Q Consensus 127 l~~~~~g~-~~~p~vvllHG~~~~~~~~~-----~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~ 199 (398)
++|.+... ..+++||++||+....+.|+ .++..|.+ ||+|+++|+||+|.+...... .+|..+.+.+++..
T Consensus 177 i~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~--ddY~~~~i~~al~~ 254 (532)
T TIGR01838 177 IQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTF--DDYIRDGVIAALEV 254 (532)
T ss_pred EEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCCh--hhhHHHHHHHHHHH
Confidence 34544333 24689999999988888875 68888887 999999999999988654321 13545566777888
Q ss_pred HHHHhCCCcEEEEEeCcChHHHH----HHHHhC-CCccceEEEECCcCcccCCCCchhH------HHhHHhhhhhhccCC
Q 015903 200 FVNEIANDKVSLVVQGYFSPVVV----KYASKH-KDKLKDLILLNPPLTAKHANLPSTL------SIFSNFLLGEIFSQD 268 (398)
Q Consensus 200 ~l~~l~~~~v~lvG~S~Gg~ia~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 268 (398)
+++.++.++++++|||+||.++. .++... +++|+++++++++.+.........+ ..+... ... ....
T Consensus 255 v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~-~~~-~G~l 332 (532)
T TIGR01838 255 VEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQ-NGG-GGYL 332 (532)
T ss_pred HHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHH-HHh-cCCC
Confidence 88888999999999999999852 345555 7899999999998765532111100 000000 000 0000
Q ss_pred ccchhhhhhhccCCCCCChhhhhhhhcccccCCC-chhHHHHHHH----hhhhhHHHHHHHHH--------------Hhh
Q 015903 269 PLRASDKALTSCGPYQMKEDDAMVYRSPYLSSGS-SGFALTAISK----GMKKQLKQYVEEMR--------------TIL 329 (398)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~--------------~~~ 329 (398)
+-......+....+..+- ...+...++.... ..+.+..+.. .-......++..+- ...
T Consensus 333 pg~~m~~~F~~lrp~~l~---w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~ 409 (532)
T TIGR01838 333 DGRQMAVTFSLLRENDLI---WNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRL 409 (532)
T ss_pred CHHHHHHHHHhcChhhHH---HHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEec
Confidence 000111111111111000 0000000110000 0010000000 00000111111110 112
Q ss_pred ccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCcEEEcCCCCCcccccChH
Q 015903 330 MDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELIELPMAGHHVQEDSGE 381 (398)
Q Consensus 330 ~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~~gH~~~~e~p~ 381 (398)
...+|++|+++|+|++|.++|.+.++.+.+.+ +.+..+++++||..++++|.
T Consensus 410 dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 410 DLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred chhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 34678999999999999999999999998888 88888999999999887763
No 61
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.83 E-value=2.2e-19 Score=149.82 Aligned_cols=183 Identities=17% Similarity=0.204 Sum_probs=133.8
Q ss_pred CCEEEEecCCCCCccchhhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hC-CCcE
Q 015903 137 NHTVLLIHGFPSQAYSYRKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNE----IA-NDKV 209 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~----l~-~~~v 209 (398)
.++|++.||...+......+...|.. +++|+.+|++|+|.|.+.+.. . ...+|++++-+. .| .+++
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE----~---n~y~Di~avye~Lr~~~g~~~~I 132 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE----R---NLYADIKAVYEWLRNRYGSPERI 132 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccc----c---cchhhHHHHHHHHHhhcCCCceE
Confidence 58999999997777766666666666 999999999999999887753 1 333444444443 33 6789
Q ss_pred EEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhh
Q 015903 210 SLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDD 289 (398)
Q Consensus 210 ~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (398)
+|+|+|+|+..++.+|.+.| +.++||.+|........ .. .
T Consensus 133 il~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~------------~~-----~--------------------- 172 (258)
T KOG1552|consen 133 ILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVA------------FP-----D--------------------- 172 (258)
T ss_pred EEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhh------------cc-----C---------------------
Confidence 99999999999999999998 99999999965432100 00 0
Q ss_pred hhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc--CCcEEE
Q 015903 290 AMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS--NHELIE 367 (398)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~--~~~~~~ 367 (398)
.... + +.+.+..+...+.|++|+|++||++|.+++..+..++.+.. ..+-.+
T Consensus 173 --~~~~-~-----------------------~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~ 226 (258)
T KOG1552|consen 173 --TKTT-Y-----------------------CFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLW 226 (258)
T ss_pred --cceE-E-----------------------eeccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcE
Confidence 0000 0 00000002233567999999999999999999999999999 568899
Q ss_pred cCCCCCcccccChHHHHHHHHHHHhh
Q 015903 368 LPMAGHHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 368 i~~~gH~~~~e~p~~~~~~i~~fl~~ 393 (398)
+.|+||.-. +...++.+.+..|+..
T Consensus 227 v~g~gH~~~-~~~~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 227 VKGAGHNDI-ELYPEYIEHLRRFISS 251 (258)
T ss_pred EecCCCccc-ccCHHHHHHHHHHHHH
Confidence 999999754 5666788888888864
No 62
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.83 E-value=1.4e-18 Score=153.40 Aligned_cols=256 Identities=22% Similarity=0.343 Sum_probs=150.5
Q ss_pred CCeEEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhhc---CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 015903 123 EIFRWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSK---NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLES 199 (398)
Q Consensus 123 ~g~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~---g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~ 199 (398)
.+..+.|...+.. +|+|+++||++++...|......+.. .|+|+.+|+||||.|. .. .+....+++++..
T Consensus 8 ~~~~~~~~~~~~~-~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-----~~~~~~~~~~~~~ 80 (282)
T COG0596 8 DGVRLAYREAGGG-GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-----GYSLSAYADDLAA 80 (282)
T ss_pred CCeEEEEeecCCC-CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc-----cccHHHHHHHHHH
Confidence 5567777777765 67999999999999998774333333 2999999999999997 11 2345556999999
Q ss_pred HHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCc-------hhHHHhHHhhhhhhccCCccch
Q 015903 200 FVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLP-------STLSIFSNFLLGEIFSQDPLRA 272 (398)
Q Consensus 200 ~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 272 (398)
+++.++..+++++|||+||.+++.++.++|++++++|++++.......... .......... .... ...
T Consensus 81 ~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~ 155 (282)
T COG0596 81 LLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLL--LGLD---AAA 155 (282)
T ss_pred HHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhh--hccc---hhh
Confidence 999999889999999999999999999999999999999976541100000 0000000000 0000 000
Q ss_pred hhhhhhccC-CCCCChhhhhhhhcccccCCCchhHHHHHHHh----hhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCC
Q 015903 273 SDKALTSCG-PYQMKEDDAMVYRSPYLSSGSSGFALTAISKG----MKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDR 347 (398)
Q Consensus 273 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~ 347 (398)
......... ......... ...................... ........... .......++++|+++++|++|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~g~~d~ 233 (282)
T COG0596 156 FAALLAALGLLAALAAAAR-AGLAEALRAPLLGAAAAAFARAARADLAAALLALLDR-DLRAALARITVPTLIIHGEDDP 233 (282)
T ss_pred hhhhhhcccccccccccch-hccccccccccchhHhhhhhhhcccccchhhhccccc-ccchhhccCCCCeEEEecCCCC
Confidence 000000000 000000000 0000000000000000000000 00000000000 0111234568999999999997
Q ss_pred ccCchhHHHHHHhc-C-CcEEEcCCCCCcccccChHHHHHHHHHHHh
Q 015903 348 WLNNDGVEDFCNDS-N-HELIELPMAGHHVQEDSGEELGKVISEIFR 392 (398)
Q Consensus 348 ~v~~~~~~~l~~~~-~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 392 (398)
+.|......+.+.. + .++++++++||.++.++|+.+.+.+.+|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 234 VVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred cCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 77766556666666 4 799999999999999999999999988554
No 63
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.82 E-value=8e-18 Score=142.26 Aligned_cols=243 Identities=18% Similarity=0.274 Sum_probs=161.3
Q ss_pred eEEEEEeccCCCCC--EEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 015903 125 FRWFCVESGNADNH--TVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFV 201 (398)
Q Consensus 125 ~~l~~~~~g~~~~p--~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l 201 (398)
+.--|.+..+...| +||-+||-+|+...|+.+.+.|.+ |.++|.+++||+|.+..+... .++-.+....+.+++
T Consensus 21 ~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~---~~~n~er~~~~~~ll 97 (297)
T PF06342_consen 21 VQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQ---QYTNEERQNFVNALL 97 (297)
T ss_pred EEEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCccc---ccChHHHHHHHHHHH
Confidence 35556665443333 899999999999999999999999 999999999999999987764 789999999999999
Q ss_pred HHhCCC-cEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhH-HHhHHhhhhhhccCCccchhhhhhhc
Q 015903 202 NEIAND-KVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTL-SIFSNFLLGEIFSQDPLRASDKALTS 279 (398)
Q Consensus 202 ~~l~~~-~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (398)
+.++++ +++++|||.||-.|+.+|..+| ..++++++|+............ ......++. ++.. ...+..
T Consensus 98 ~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~-~lp~---~~~~~i--- 168 (297)
T PF06342_consen 98 DELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYD-LLPR---FIINAI--- 168 (297)
T ss_pred HHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHH-HhhH---HHHHHH---
Confidence 999875 6889999999999999999996 6799999998766544433321 111122211 1111 000000
Q ss_pred cCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHH
Q 015903 280 CGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCN 359 (398)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~ 359 (398)
....+...-+.......+..++......++......+..+ .+-++|+++++|.+|.++..+.+.++..
T Consensus 169 ---------~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~l---n~~~ikvli~ygg~DhLIEeeI~~E~a~ 236 (297)
T PF06342_consen 169 ---------MYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKL---NKKPIKVLIAYGGKDHLIEEEISFEFAM 236 (297)
T ss_pred ---------HHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHh---ccCCCcEEEEEcCcchhhHHHHHHHHHH
Confidence 1111111111111122333334444444444444444433 2336999999999999987766665544
Q ss_pred hc----------------------------CCcEEEcCCCCCcccccChHHHHHHHHHHH
Q 015903 360 DS----------------------------NHELIELPMAGHHVQEDSGEELGKVISEIF 391 (398)
Q Consensus 360 ~~----------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 391 (398)
.. ....+.|.+.||+.+-.+++.+++.+...|
T Consensus 237 ~f~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 237 KFKGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMF 296 (297)
T ss_pred HhCCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhh
Confidence 32 112445566688877777777777777655
No 64
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.82 E-value=9.1e-20 Score=156.49 Aligned_cols=194 Identities=15% Similarity=0.175 Sum_probs=124.7
Q ss_pred chhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCcEEEEEeCcChHHHHHH
Q 015903 152 SYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI------ANDKVSLVVQGYFSPVVVKY 224 (398)
Q Consensus 152 ~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvG~S~Gg~ia~~~ 224 (398)
.|....+.|++ ||.|+.+|+||.+.........+.........+|+.+.++.+ +.+++.++|+|+||++++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 35566778866 999999999998854322111111222344556666666655 45689999999999999999
Q ss_pred HHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhhhhcccccCCCch
Q 015903 225 ASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMVYRSPYLSSGSSG 304 (398)
Q Consensus 225 a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (398)
+.++|++++++|..++..+.......... +.. .....+..
T Consensus 82 ~~~~~~~f~a~v~~~g~~d~~~~~~~~~~--~~~-----------------------------~~~~~~~~--------- 121 (213)
T PF00326_consen 82 ATQHPDRFKAAVAGAGVSDLFSYYGTTDI--YTK-----------------------------AEYLEYGD--------- 121 (213)
T ss_dssp HHHTCCGSSEEEEESE-SSTTCSBHHTCC--HHH-----------------------------GHHHHHSS---------
T ss_pred hcccceeeeeeeccceecchhcccccccc--ccc-----------------------------ccccccCc---------
Confidence 99999999999999987654311000000 000 00000000
Q ss_pred hHHHHHHHhhhhhHHHHHHHHHHhhccCC--CCCCEEEEeeCCCCccCchhHHHHHHhc-----CCcEEEcCCCCCccc-
Q 015903 305 FALTAISKGMKKQLKQYVEEMRTILMDKS--WKIPTTVCWGQRDRWLNNDGVEDFCNDS-----NHELIELPMAGHHVQ- 376 (398)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~Pvlii~G~~D~~v~~~~~~~l~~~~-----~~~~~~i~~~gH~~~- 376 (398)
...........+++....+ +++|+|++||++|..||++++.++.+++ +.+++++|++||.+.
T Consensus 122 ----------~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~ 191 (213)
T PF00326_consen 122 ----------PWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN 191 (213)
T ss_dssp ----------TTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS
T ss_pred ----------cchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC
Confidence 0001222233344444444 6999999999999999999999999888 688999999999664
Q ss_pred ccChHHHHHHHHHHHhhcc
Q 015903 377 EDSGEELGKVISEIFRKRR 395 (398)
Q Consensus 377 ~e~p~~~~~~i~~fl~~~~ 395 (398)
.++..++.+.+.+||+++-
T Consensus 192 ~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 192 PENRRDWYERILDFFDKYL 210 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred chhHHHHHHHHHHHHHHHc
Confidence 4566788999999998763
No 65
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.82 E-value=1.6e-19 Score=144.92 Aligned_cols=211 Identities=15% Similarity=0.175 Sum_probs=145.7
Q ss_pred cCCeEEEEE-eccCCCCCEEEEecCCCCCccchhhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 015903 122 DEIFRWFCV-ESGNADNHTVLLIHGFPSQAYSYRKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLE 198 (398)
Q Consensus 122 ~~g~~l~~~-~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~ 198 (398)
.|.+++... .....+.|+++++||..++-...-+.+..+-. +.+|+.+++||+|.|.+.+...| +.-|-+
T Consensus 62 ~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~G-------L~lDs~ 134 (300)
T KOG4391|consen 62 RDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEG-------LKLDSE 134 (300)
T ss_pred CcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccc-------eeccHH
Confidence 355666533 22334679999999999988877666654433 89999999999999998776433 223344
Q ss_pred HHHHHh------CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccch
Q 015903 199 SFVNEI------ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRA 272 (398)
Q Consensus 199 ~~l~~l------~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (398)
.+++++ +..+++++|.|+||.+|+.+|++..+++.++|+-+.....+....+....
T Consensus 135 avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p------------------ 196 (300)
T KOG4391|consen 135 AVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFP------------------ 196 (300)
T ss_pred HHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheecc------------------
Confidence 444443 45689999999999999999999999999999998865432111100000
Q ss_pred hhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCch
Q 015903 273 SDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNND 352 (398)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~ 352 (398)
+. ...+......+.......+ .+-++|.|+|.|.+|+++|+.
T Consensus 197 ------------------------~~--------~k~i~~lc~kn~~~S~~ki------~~~~~P~LFiSGlkDelVPP~ 238 (300)
T KOG4391|consen 197 ------------------------FP--------MKYIPLLCYKNKWLSYRKI------GQCRMPFLFISGLKDELVPPV 238 (300)
T ss_pred ------------------------ch--------hhHHHHHHHHhhhcchhhh------ccccCceEEeecCccccCCcH
Confidence 00 0000110011111111122 233899999999999999999
Q ss_pred hHHHHHHhc---CCcEEEcCCCCCcccccChHHHHHHHHHHHhhccc
Q 015903 353 GVEDFCNDS---NHELIELPMAGHHVQEDSGEELGKVISEIFRKRRL 396 (398)
Q Consensus 353 ~~~~l~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 396 (398)
+.+.+++.+ ..++.++|++.|.-.+ ..+-+++.|.+||.+...
T Consensus 239 ~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~-i~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 239 MMRQLYELCPSRTKRLAEFPDGTHNDTW-ICDGYFQAIEDFLAEVVK 284 (300)
T ss_pred HHHHHHHhCchhhhhheeCCCCccCceE-EeccHHHHHHHHHHHhcc
Confidence 999999999 7899999999997543 346789999999987643
No 66
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.80 E-value=3.6e-19 Score=143.11 Aligned_cols=142 Identities=23% Similarity=0.442 Sum_probs=111.8
Q ss_pred EEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcC
Q 015903 139 TVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYF 217 (398)
Q Consensus 139 ~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~G 217 (398)
+||++||++++...|..+.+.|++ ||.|+.+|+||+|.+... ...+++.+++. .+..+.++++++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~--~~~~~~~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA-------DAVERVLADIR--AGYPDPDRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS-------HHHHHHHHHHH--HHHCTCCEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh-------HHHHHHHHHHH--hhcCCCCcEEEEEEccC
Confidence 689999999999999999999988 999999999999987321 12333333333 11236789999999999
Q ss_pred hHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhhhhccc
Q 015903 218 SPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMVYRSPY 297 (398)
Q Consensus 218 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (398)
|.+++.++.+. .+++++|++++... .
T Consensus 72 g~~a~~~~~~~-~~v~~~v~~~~~~~-~---------------------------------------------------- 97 (145)
T PF12695_consen 72 GAIAANLAARN-PRVKAVVLLSPYPD-S---------------------------------------------------- 97 (145)
T ss_dssp HHHHHHHHHHS-TTESEEEEESESSG-C----------------------------------------------------
T ss_pred cHHHHHHhhhc-cceeEEEEecCccc-h----------------------------------------------------
Confidence 99999999998 78999999998210 0
Q ss_pred ccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc--CCcEEEcCCCCCc
Q 015903 298 LSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS--NHELIELPMAGHH 374 (398)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~--~~~~~~i~~~gH~ 374 (398)
..+ .+.++|+++++|++|..++.+..+++.+.+ +.++++++|++|+
T Consensus 98 -------------------------~~~------~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 98 -------------------------EDL------AKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp -------------------------HHH------TTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred -------------------------hhh------hccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 000 123789999999999999999999999988 6899999999995
No 67
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.79 E-value=1.5e-18 Score=149.69 Aligned_cols=247 Identities=13% Similarity=0.150 Sum_probs=142.5
Q ss_pred CCCCEEEEecCCCCCcc-ch-hhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCC
Q 015903 135 ADNHTVLLIHGFPSQAY-SY-RKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI----AND 207 (398)
Q Consensus 135 ~~~p~vvllHG~~~~~~-~~-~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~ 207 (398)
..+|.||++||+.|++. .| ..+...+.+ ||.|+++|+|||+++....+........ +|+..+++.+ ...
T Consensus 73 ~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t----~D~~~~l~~l~~~~~~r 148 (345)
T COG0429 73 AKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGET----EDIRFFLDWLKARFPPR 148 (345)
T ss_pred cCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccch----hHHHHHHHHHHHhCCCC
Confidence 45689999999965544 45 566677777 9999999999999987755532122222 5555555544 567
Q ss_pred cEEEEEeCcChHHHHHHHHhCCC--ccceEEEECCcCcccCCC--CchhHH-HhHHhhhhhhccCCccchhhhhhhccCC
Q 015903 208 KVSLVVQGYFSPVVVKYASKHKD--KLKDLILLNPPLTAKHAN--LPSTLS-IFSNFLLGEIFSQDPLRASDKALTSCGP 282 (398)
Q Consensus 208 ~v~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (398)
++..+|.|+||.+...+..+..+ .+.+.+.++.+.+..... +..... .+....+...+.. .....+... .
T Consensus 149 ~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~----~~~~kl~~l-~ 223 (345)
T COG0429 149 PLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKR----NAARKLKEL-E 223 (345)
T ss_pred ceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHH----HHHHHHHhc-C
Confidence 89999999999666666665533 466666666654432100 000000 1111111111111 111111111 0
Q ss_pred CCCChhhhhhhhc-ccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc
Q 015903 283 YQMKEDDAMVYRS-PYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS 361 (398)
Q Consensus 283 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~ 361 (398)
...+.......++ .....-+..+. ....-..+..++.+..+.+....+|.+|+|||++.+|++++++.........
T Consensus 224 ~~~p~~~~~~ik~~~ti~eFD~~~T---ap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~ 300 (345)
T COG0429 224 PSLPGTVLAAIKRCRTIREFDDLLT---APLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEML 300 (345)
T ss_pred cccCcHHHHHHHhhchHHhccceee---ecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcC
Confidence 0011110000000 00000000000 0011124557788888888888999999999999999999998776666634
Q ss_pred --CCcEEEcCCCCCccccc----ChH-HHHHHHHHHHhh
Q 015903 362 --NHELIELPMAGHHVQED----SGE-ELGKVISEIFRK 393 (398)
Q Consensus 362 --~~~~~~i~~~gH~~~~e----~p~-~~~~~i~~fl~~ 393 (398)
++.+...+.+||..++. ++. ...+.|.+||+.
T Consensus 301 np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 301 NPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred CCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 88899999999988766 343 456777777765
No 68
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.79 E-value=2.9e-18 Score=178.03 Aligned_cols=243 Identities=15% Similarity=0.255 Sum_probs=146.0
Q ss_pred CCCEEEEecCCCCCccchhhh-----hHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCC
Q 015903 136 DNHTVLLIHGFPSQAYSYRKV-----LPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNE---IAN 206 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~~~~-----~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~---l~~ 206 (398)
.+++|||+||++.+...|+.. ++.|.+ ||+|+++|+ |.++.+... ...++.+++..+.+.++. +..
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~--~~~~l~~~i~~l~~~l~~v~~~~~ 140 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGG--MERNLADHVVALSEAIDTVKDVTG 140 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcC--ccCCHHHHHHHHHHHHHHHHHhhC
Confidence 468999999999999999765 788866 999999995 555544321 135677777666666654 345
Q ss_pred CcEEEEEeCcChHHHHHHHHhC-CCccceEEEECCcCcccCC---CCchhHHHh-HHhhhhhhccC--------------
Q 015903 207 DKVSLVVQGYFSPVVVKYASKH-KDKLKDLILLNPPLTAKHA---NLPSTLSIF-SNFLLGEIFSQ-------------- 267 (398)
Q Consensus 207 ~~v~lvG~S~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~-------------- 267 (398)
++++++||||||.+++.+++.+ +++|+++|+++++.+.... ..+...... .......+...
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 220 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQM 220 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHh
Confidence 7899999999999999998755 5689999999988654321 111100000 00000000000
Q ss_pred -Cccchhh---hhhhccCC-C-CCChhhhhhhhcc--cccCCCchhHHHHHHHhhhhhHHHHHHHHHH---h--------
Q 015903 268 -DPLRASD---KALTSCGP-Y-QMKEDDAMVYRSP--YLSSGSSGFALTAISKGMKKQLKQYVEEMRT---I-------- 328 (398)
Q Consensus 268 -~~~~~~~---~~~~~~~~-~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------- 328 (398)
.+..... .++..... . ....+....+... +. ...+ .........+.. .
T Consensus 221 l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~--~~~g-----------~~~~~~~~~~~~~n~~~~g~~~~~ 287 (994)
T PRK07868 221 LDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWI--AWSG-----------PAISELLKQFIAHNRMMTGGFAIN 287 (994)
T ss_pred cChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhcc--ccch-----------HHHHHHHHHHHHhCcccCceEEEC
Confidence 0000000 00000000 0 0000000000000 00 0000 011111222211 0
Q ss_pred ---hccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCcE-EEcCCCCCcccc---cChHHHHHHHHHHHhhccc
Q 015903 329 ---LMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHEL-IELPMAGHHVQE---DSGEELGKVISEIFRKRRL 396 (398)
Q Consensus 329 ---~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~-~~i~~~gH~~~~---e~p~~~~~~i~~fl~~~~~ 396 (398)
..+.+|++|+|+|+|++|.++|++.++.+.+.+ +.++ .+++++||+.++ .-+++++..|.+||+++.-
T Consensus 288 ~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 288 GQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred CEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 124688999999999999999999999999988 7777 678999999764 3678999999999998754
No 69
>PRK11460 putative hydrolase; Provisional
Probab=99.77 E-value=1.5e-17 Score=143.84 Aligned_cols=175 Identities=9% Similarity=0.006 Sum_probs=118.5
Q ss_pred CCCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCC-CC------CCCCCH---HHHHHHHHHHHH-
Q 015903 135 ADNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQP-GY------GFDYTL---DEYVASLESFVN- 202 (398)
Q Consensus 135 ~~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~-~~------~~~~~~---~~~~~dl~~~l~- 202 (398)
+..|+||++||+|++...|..+.+.|.+ ++.+..++.+|...+..... .+ ...... .+..+.+.++++
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 93 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRY 93 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence 3468999999999999999999999986 55556666666532211000 00 001111 222223333333
Q ss_pred ---HhC--CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhh
Q 015903 203 ---EIA--NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKAL 277 (398)
Q Consensus 203 ---~l~--~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (398)
..+ .++++++|+|+||.+++.++.++|+.+.++|.+++.+...
T Consensus 94 ~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~-------------------------------- 141 (232)
T PRK11460 94 WQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL-------------------------------- 141 (232)
T ss_pred HHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc--------------------------------
Confidence 333 3579999999999999999999998888888776522100
Q ss_pred hccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHH
Q 015903 278 TSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDF 357 (398)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l 357 (398)
. . . ...+.|++++||++|+++|.+.++++
T Consensus 142 --------~-~------------~------------------------------~~~~~pvli~hG~~D~vvp~~~~~~~ 170 (232)
T PRK11460 142 --------P-E------------T------------------------------APTATTIHLIHGGEDPVIDVAHAVAA 170 (232)
T ss_pred --------c-c------------c------------------------------ccCCCcEEEEecCCCCccCHHHHHHH
Confidence 0 0 0 01178999999999999999999888
Q ss_pred HHhc-----CCcEEEcCCCCCcccccChHHHHHHHHHHHh
Q 015903 358 CNDS-----NHELIELPMAGHHVQEDSGEELGKVISEIFR 392 (398)
Q Consensus 358 ~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 392 (398)
.+.+ ++++++++++||.+..+..+.+.+.|.++|.
T Consensus 171 ~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 171 QEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred HHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 8877 4678889999999876555666666666654
No 70
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.75 E-value=2.9e-16 Score=139.87 Aligned_cols=201 Identities=10% Similarity=0.078 Sum_probs=122.4
Q ss_pred CCCEEEEecCCCCCccchhh--hhHhhhc--CCeEEEEcC--CCCCCCCCCC----------------CCCCCCCCHH-H
Q 015903 136 DNHTVLLIHGFPSQAYSYRK--VLPVLSK--NYHAIAFDW--LGFGFSEKPQ----------------PGYGFDYTLD-E 192 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~~~--~~~~L~~--g~~Vi~~D~--rG~G~S~~~~----------------~~~~~~~~~~-~ 192 (398)
+.|+|+++||++++...|.. .+..++. |+.|+++|. +|+|.+.... ......+... .
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 36899999999998888743 2344544 999999998 5555432110 0000012333 3
Q ss_pred HHHHHHHHHHH---hCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCc
Q 015903 193 YVASLESFVNE---IANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDP 269 (398)
Q Consensus 193 ~~~dl~~~l~~---l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (398)
+++++..+++. ++.++++++||||||++++.++.++|+.+++++++++....... ... .......+.
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~l~--- 190 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRC---PWG----QKAFSAYLG--- 190 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccC---cch----HHHHHHHhc---
Confidence 46788888876 35678999999999999999999999999999999987543210 000 000000000
Q ss_pred cchhhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCcc
Q 015903 270 LRASDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWL 349 (398)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v 349 (398)
..... ... .+....... .+...|+++++|++|..+
T Consensus 191 ------------------------------~~~~~-----~~~---~~~~~~~~~-------~~~~~plli~~G~~D~~v 225 (275)
T TIGR02821 191 ------------------------------ADEAA-----WRS---YDASLLVAD-------GGRHSTILIDQGTADQFL 225 (275)
T ss_pred ------------------------------ccccc-----hhh---cchHHHHhh-------cccCCCeeEeecCCCccc
Confidence 00000 000 000000000 123679999999999999
Q ss_pred Cc-hhHHHHHHhc-----CCcEEEcCCCCCcccccChHHHHHHHHHHHhh
Q 015903 350 NN-DGVEDFCNDS-----NHELIELPMAGHHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 350 ~~-~~~~~l~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 393 (398)
+. .....+.+.+ ++++.++||++|.+.. -..+.....+|..+
T Consensus 226 ~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~--~~~~~~~~~~~~~~ 273 (275)
T TIGR02821 226 DEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF--IASFIADHLRHHAE 273 (275)
T ss_pred CccccHHHHHHHHHHcCCCeEEEEeCCCCccchh--HHHhHHHHHHHHHh
Confidence 98 4555565555 6789999999998752 23344444444443
No 71
>PLN02442 S-formylglutathione hydrolase
Probab=99.74 E-value=1.6e-16 Score=141.70 Aligned_cols=187 Identities=13% Similarity=0.140 Sum_probs=114.7
Q ss_pred CCCEEEEecCCCCCccchhh---hhHhhhc-CCeEEEEcCCCCCC-----CCC-------------CCCCC----CCCCC
Q 015903 136 DNHTVLLIHGFPSQAYSYRK---VLPVLSK-NYHAIAFDWLGFGF-----SEK-------------PQPGY----GFDYT 189 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~~~---~~~~L~~-g~~Vi~~D~rG~G~-----S~~-------------~~~~~----~~~~~ 189 (398)
..|+|+++||++++...|.. +...+.. |+.|+.+|..++|. +.. ....+ ...+-
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 46899999999988877743 3355555 99999999887661 110 00000 00112
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCc
Q 015903 190 LDEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDP 269 (398)
Q Consensus 190 ~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (398)
.+++...+....+.++.++++|+||||||+.++.++.++|+++++++.+++........ ..... ....+..
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~g~-- 196 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCP--WGQKA-----FTNYLGS-- 196 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCc--hhhHH-----HHHHcCC--
Confidence 34444455555555678899999999999999999999999999999999876432100 00000 0000000
Q ss_pred cchhhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCcc
Q 015903 270 LRASDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWL 349 (398)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v 349 (398)
.... +.. ......+......++|+++++|++|.++
T Consensus 197 ----------------~~~~--------------------~~~---------~d~~~~~~~~~~~~~pvli~~G~~D~~v 231 (283)
T PLN02442 197 ----------------DKAD--------------------WEE---------YDATELVSKFNDVSATILIDQGEADKFL 231 (283)
T ss_pred ----------------Chhh--------------------HHH---------cChhhhhhhccccCCCEEEEECCCCccc
Confidence 0000 000 0111111112244899999999999999
Q ss_pred Cch-hHHHHHHhc-----CCcEEEcCCCCCccc
Q 015903 350 NND-GVEDFCNDS-----NHELIELPMAGHHVQ 376 (398)
Q Consensus 350 ~~~-~~~~l~~~~-----~~~~~~i~~~gH~~~ 376 (398)
+.. .++.+.+.+ +++++++++.+|..+
T Consensus 232 ~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 232 KEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred cccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 863 345555444 788999999999765
No 72
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.73 E-value=5.5e-17 Score=141.58 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=89.1
Q ss_pred EEEeccCCCCCEEEEecCCCCCc----cchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 015903 128 FCVESGNADNHTVLLIHGFPSQA----YSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVN 202 (398)
Q Consensus 128 ~~~~~g~~~~p~vvllHG~~~~~----~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~ 202 (398)
++...+....++||++||+++.. ..|..+++.|++ ||+|+.+|+||||.|..... ..+++++.+|+..+++
T Consensus 16 ~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~----~~~~~~~~~Dv~~ai~ 91 (266)
T TIGR03101 16 YHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA----AARWDVWKEDVAAAYR 91 (266)
T ss_pred EecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc----cCCHHHHHHHHHHHHH
Confidence 33333333357899999998643 356677888886 99999999999999976543 3567888888877655
Q ss_pred Hh---CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCc
Q 015903 203 EI---ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLT 243 (398)
Q Consensus 203 ~l---~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 243 (398)
.+ +.++++++||||||.+++.+|.++|++++++|+++|...
T Consensus 92 ~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 92 WLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred HHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 44 567999999999999999999999999999999998654
No 73
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.73 E-value=2e-16 Score=141.71 Aligned_cols=249 Identities=12% Similarity=0.107 Sum_probs=134.8
Q ss_pred CCCEEEEecCCCCCc-cch-hhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEE
Q 015903 136 DNHTVLLIHGFPSQA-YSY-RKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLV 212 (398)
Q Consensus 136 ~~p~vvllHG~~~~~-~~~-~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lv 212 (398)
+.|.||++||+.+++ +.| +.++..+.+ ||+|++++.||+|++.-..+......+.+|+...+..+.+.....++..+
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~av 203 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAV 203 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEE
Confidence 469999999996554 445 555555555 99999999999999987776522223344444444444444445689999
Q ss_pred EeCcChHHHHHHHHhCCC---ccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCC-CCCChh
Q 015903 213 VQGYFSPVVVKYASKHKD---KLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGP-YQMKED 288 (398)
Q Consensus 213 G~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 288 (398)
|.||||.+.+.|..+..+ .+.++++++| ++.- .....+........+.......+...+..... ......
T Consensus 204 G~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~P-wd~~-----~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~v 277 (409)
T KOG1838|consen 204 GFSMGGNILTNYLGEEGDNTPLIAAVAVCNP-WDLL-----AASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPV 277 (409)
T ss_pred EecchHHHHHHHhhhccCCCCceeEEEEecc-chhh-----hhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccc
Confidence 999999999999988654 3445555444 3321 00000000111111111000000000000000 000000
Q ss_pred hhhhhhc-ccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhH-HHHHHhc-CCcE
Q 015903 289 DAMVYRS-PYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGV-EDFCNDS-NHEL 365 (398)
Q Consensus 289 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~-~~l~~~~-~~~~ 365 (398)
+.....+ .....-+..+.. . ..-..+...+.++.+.....++|++|+|+|++.+|+++|.+.. .+...+. ++-+
T Consensus 278 d~d~~~~~~SvreFD~~~t~--~-~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l 354 (409)
T KOG1838|consen 278 DFDVILKSRSVREFDEALTR--P-MFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLL 354 (409)
T ss_pred hhhhhhhcCcHHHHHhhhhh--h-hcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEE
Confidence 0000000 000000000100 0 0112335667777777777899999999999999999998643 2333333 6777
Q ss_pred EEcCCCCCcccccC----hHHHHHH-HHHHHhh
Q 015903 366 IELPMAGHHVQEDS----GEELGKV-ISEIFRK 393 (398)
Q Consensus 366 ~~i~~~gH~~~~e~----p~~~~~~-i~~fl~~ 393 (398)
++-..+||..++|. +....+. +.+|+..
T Consensus 355 ~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 355 VITSHGGHLGFLEGLWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred EEeCCCceeeeeccCCCccchhHHHHHHHHHHH
Confidence 77888999988775 2333333 6666653
No 74
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.73 E-value=2.2e-16 Score=126.93 Aligned_cols=214 Identities=20% Similarity=0.220 Sum_probs=136.1
Q ss_pred CCEEEEecCCCCCcc--chhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-c--EE
Q 015903 137 NHTVLLIHGFPSQAY--SYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIAND-K--VS 210 (398)
Q Consensus 137 ~p~vvllHG~~~~~~--~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~-~--v~ 210 (398)
...+|++||+-++.. ....++..|.+ |+.++.+|++|.|.|...... -.....++|+..+++++... + -+
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~----Gn~~~eadDL~sV~q~~s~~nr~v~v 108 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY----GNYNTEADDLHSVIQYFSNSNRVVPV 108 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc----CcccchHHHHHHHHHHhccCceEEEE
Confidence 569999999976554 34677788888 999999999999999877642 23445569999999998533 3 36
Q ss_pred EEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhh
Q 015903 211 LVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDA 290 (398)
Q Consensus 211 lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (398)
++|||-||.+++.+|.++++ ++-+|.+++-++....-....-.....+.....|.....
T Consensus 109 i~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~-------------------- 167 (269)
T KOG4667|consen 109 ILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGP-------------------- 167 (269)
T ss_pred EEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCceecCc--------------------
Confidence 88999999999999999987 888888877655431100000000000111100000000
Q ss_pred hhhhcccccCCCchh--HHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCcEEE
Q 015903 291 MVYRSPYLSSGSSGF--ALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELIE 367 (398)
Q Consensus 291 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~ 367 (398)
..+...+ ....+...+..+.. ++...+ ..+||||-+||..|.++|.+.+.++++.+ +.++.+
T Consensus 168 --------rkG~y~~rvt~eSlmdrLntd~h---~aclkI----d~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~i 232 (269)
T KOG4667|consen 168 --------RKGKYGYRVTEESLMDRLNTDIH---EACLKI----DKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEI 232 (269)
T ss_pred --------ccCCcCceecHHHHHHHHhchhh---hhhcCc----CccCceEEEeccCCceeechhHHHHHHhccCCceEE
Confidence 0000000 00001111111111 111111 34899999999999999999999999999 999999
Q ss_pred cCCCCCcccccChHHHHHHHHHHH
Q 015903 368 LPMAGHHVQEDSGEELGKVISEIF 391 (398)
Q Consensus 368 i~~~gH~~~~e~p~~~~~~i~~fl 391 (398)
++|+.|.... +..+.......|.
T Consensus 233 IEgADHnyt~-~q~~l~~lgl~f~ 255 (269)
T KOG4667|consen 233 IEGADHNYTG-HQSQLVSLGLEFI 255 (269)
T ss_pred ecCCCcCccc-hhhhHhhhcceeE
Confidence 9999998653 3344444444444
No 75
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=2.2e-16 Score=138.75 Aligned_cols=268 Identities=15% Similarity=0.176 Sum_probs=157.9
Q ss_pred CCeEEEEEeccCCC---CCEEEEecCCCCCccc-----------hhhhh---Hhhhc-CCeEEEEcCCCCC-CCCCCCCC
Q 015903 123 EIFRWFCVESGNAD---NHTVLLIHGFPSQAYS-----------YRKVL---PVLSK-NYHAIAFDWLGFG-FSEKPQPG 183 (398)
Q Consensus 123 ~g~~l~~~~~g~~~---~p~vvllHG~~~~~~~-----------~~~~~---~~L~~-g~~Vi~~D~rG~G-~S~~~~~~ 183 (398)
+.+++.|+.+|..+ ...||++||+.+++.. |+.++ ..+.. .|.||+.|..|.+ .|+.+...
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 77899999999643 4689999999875442 34443 22433 7999999999876 55544321
Q ss_pred -CC--------CCCCHHHHHHHHHHHHHHhCCCcEE-EEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhH
Q 015903 184 -YG--------FDYTLDEYVASLESFVNEIANDKVS-LVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTL 253 (398)
Q Consensus 184 -~~--------~~~~~~~~~~dl~~~l~~l~~~~v~-lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 253 (398)
.. ...++.|++..-..++++||++++. +||.||||+.+++++..+|++|..+|.+++........ ..+
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~--ia~ 191 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQN--IAF 191 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHH--HHH
Confidence 11 2468889999889999999999976 88999999999999999999999999998754332100 000
Q ss_pred HHhHHhhh--h-hh-----cc-CCccchh--hhhhhccCCCCCChhhhhhhhcccccC----CCchhHHHHHHHhhh---
Q 015903 254 SIFSNFLL--G-EI-----FS-QDPLRAS--DKALTSCGPYQMKEDDAMVYRSPYLSS----GSSGFALTAISKGMK--- 315 (398)
Q Consensus 254 ~~~~~~~~--~-~~-----~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--- 315 (398)
....+..+ . .+ .. ..+...+ .+.+... .+..+.+....+.+..... ....+....+.....
T Consensus 192 ~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~l-tYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf 270 (368)
T COG2021 192 NEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHL-TYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKF 270 (368)
T ss_pred HHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHH-HccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHH
Confidence 11111000 0 00 00 0011010 0000000 0000111111111100000 001111111111111
Q ss_pred ---hhHHHHHHHHHHh-------------hccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCc-EEEcC-CCCCccc
Q 015903 316 ---KQLKQYVEEMRTI-------------LMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHE-LIELP-MAGHHVQ 376 (398)
Q Consensus 316 ---~~~~~~~~~~~~~-------------~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~-~~~i~-~~gH~~~ 376 (398)
.+...++.-.+.+ ..+.+|++|+|++.-+.|.+.|++..+++.+.+ ... +++++ ..||..+
T Consensus 271 ~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaF 350 (368)
T COG2021 271 VARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAF 350 (368)
T ss_pred HhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhh
Confidence 0111111111111 013568999999999999999999999999999 444 66654 4699999
Q ss_pred ccChHHHHHHHHHHHhh
Q 015903 377 EDSGEELGKVISEIFRK 393 (398)
Q Consensus 377 ~e~p~~~~~~i~~fl~~ 393 (398)
+...+.+...|..||+.
T Consensus 351 L~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 351 LVESEAVGPLIRKFLAL 367 (368)
T ss_pred hcchhhhhHHHHHHhhc
Confidence 88888899999999975
No 76
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.72 E-value=1.4e-16 Score=136.64 Aligned_cols=251 Identities=16% Similarity=0.193 Sum_probs=146.7
Q ss_pred EEEEEeccCCC--CCEEEEecCCCCCccc-hhhhh-----HhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 015903 126 RWFCVESGNAD--NHTVLLIHGFPSQAYS-YRKVL-----PVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASL 197 (398)
Q Consensus 126 ~l~~~~~g~~~--~p~vvllHG~~~~~~~-~~~~~-----~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl 197 (398)
.+++...|+.+ +|++|-.|-.|-+... |..+. +.+.+.|.|+-+|.||+..-....+....-.+++++++++
T Consensus 10 ~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l 89 (283)
T PF03096_consen 10 SVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEML 89 (283)
T ss_dssp EEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTH
T ss_pred EEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHH
Confidence 77777778765 8999999999987765 65554 5566699999999999976443333211134899999999
Q ss_pred HHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccch-hhhh
Q 015903 198 ESFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRA-SDKA 276 (398)
Q Consensus 198 ~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 276 (398)
.+++++++++.++-+|...|++|..++|.++|++|.++||+++.... +.|...+...+....+....+.. ....
T Consensus 90 ~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~-----~gw~Ew~~~K~~~~~L~~~gmt~~~~d~ 164 (283)
T PF03096_consen 90 PEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTA-----AGWMEWFYQKLSSWLLYSYGMTSSVKDY 164 (283)
T ss_dssp HHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S--------HHHHHHHHHH-------CTTS-HHHH
T ss_pred HHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCC-----ccHHHHHHHHHhcccccccccccchHHh
Confidence 99999999999999999999999999999999999999999996543 34555554444432222111111 0000
Q ss_pred -hhccCCCC---CChhhhhhhhcccccCCCchhHHHHHHHhhh-hhHHHHHHHHHHh----hccCCCCCCEEEEeeCCCC
Q 015903 277 -LTSCGPYQ---MKEDDAMVYRSPYLSSGSSGFALTAISKGMK-KQLKQYVEEMRTI----LMDKSWKIPTTVCWGQRDR 347 (398)
Q Consensus 277 -~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~i~~Pvlii~G~~D~ 347 (398)
+....... ...+....++.. +..... .++..++..+... ...+...||+|++.|+..+
T Consensus 165 Ll~h~Fg~~~~~~n~Dlv~~yr~~-------------l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp 231 (283)
T PF03096_consen 165 LLWHYFGKEEEENNSDLVQTYRQH-------------LDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSP 231 (283)
T ss_dssp HHHHHS-HHHHHCT-HHHHHHHHH-------------HHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTST
T ss_pred hhhcccccccccccHHHHHHHHHH-------------HhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCc
Confidence 00000000 001111111111 111111 2333333333211 1235568999999999887
Q ss_pred ccCchhHHHHHHhc---CCcEEEcCCCCCcccccChHHHHHHHHHHHhhccc
Q 015903 348 WLNNDGVEDFCNDS---NHELIELPMAGHHVQEDSGEELGKVISEIFRKRRL 396 (398)
Q Consensus 348 ~v~~~~~~~l~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 396 (398)
.. +.+.++..++ +.+++.++++|=.+..|+|+.+.+.++-||+..+.
T Consensus 232 ~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~G~ 281 (283)
T PF03096_consen 232 HV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMGY 281 (283)
T ss_dssp TH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTTB
T ss_pred ch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccCCc
Confidence 65 5667888888 77899999999999999999999999999987653
No 77
>PLN00021 chlorophyllase
Probab=99.71 E-value=2e-16 Score=141.91 Aligned_cols=106 Identities=15% Similarity=0.128 Sum_probs=77.2
Q ss_pred cCCCCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------h
Q 015903 133 GNADNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNE-------I 204 (398)
Q Consensus 133 g~~~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-------l 204 (398)
..++.|+||++||++.+...|..+++.|++ ||.|+++|++|++.+..... ..+..++.+++.+.++. .
T Consensus 48 ~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~----i~d~~~~~~~l~~~l~~~l~~~~~~ 123 (313)
T PLN00021 48 EAGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDE----IKDAAAVINWLSSGLAAVLPEGVRP 123 (313)
T ss_pred CCCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhh----HHHHHHHHHHHHhhhhhhccccccc
Confidence 344579999999999999899999999988 99999999998754321110 01122223333332222 2
Q ss_pred CCCcEEEEEeCcChHHHHHHHHhCCC-----ccceEEEECCcC
Q 015903 205 ANDKVSLVVQGYFSPVVVKYASKHKD-----KLKDLILLNPPL 242 (398)
Q Consensus 205 ~~~~v~lvG~S~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~ 242 (398)
+.++++++|||+||.+++.+|..+++ +++++|+++|..
T Consensus 124 d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 124 DLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred ChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 34689999999999999999998874 689999998864
No 78
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.71 E-value=1.1e-15 Score=126.99 Aligned_cols=222 Identities=10% Similarity=0.087 Sum_probs=146.3
Q ss_pred CCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhCCCcEEEEEe
Q 015903 136 DNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVN-EIANDKVSLVVQ 214 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~-~l~~~~v~lvG~ 214 (398)
..+.++++|=.|+++..|+.+...|.....++.+++||+|..-.... ..+++++++.|..-+. ....+++.++||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~----~~di~~Lad~la~el~~~~~d~P~alfGH 81 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGEPL----LTDIESLADELANELLPPLLDAPFALFGH 81 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCCcc----cccHHHHHHHHHHHhccccCCCCeeeccc
Confidence 35688999999999999999999888889999999999997755443 4689999999988887 455578999999
Q ss_pred CcChHHHHHHHHhCCC---ccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhh
Q 015903 215 GYFSPVVVKYASKHKD---KLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAM 291 (398)
Q Consensus 215 S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (398)
||||++|.++|.+... ...++.+.+...+..... ......-...++..+ ..+....+..+.+.+
T Consensus 82 SmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~-~~i~~~~D~~~l~~l----------~~lgG~p~e~led~E-- 148 (244)
T COG3208 82 SMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRG-KQIHHLDDADFLADL----------VDLGGTPPELLEDPE-- 148 (244)
T ss_pred chhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCccc-CCccCCCHHHHHHHH----------HHhCCCChHHhcCHH--
Confidence 9999999999987522 366677766543311100 000000000000000 000000000000000
Q ss_pred hhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHh--hccCCCCCCEEEEeeCCCCccCchhHHHHHHhc--CCcEEE
Q 015903 292 VYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTI--LMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS--NHELIE 367 (398)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~--~~~~~~ 367 (398)
+...+...+......+... .....+.||+.++.|++|..+..+....+.+.. ..++.+
T Consensus 149 ------------------l~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~ 210 (244)
T COG3208 149 ------------------LMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRV 210 (244)
T ss_pred ------------------HHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEE
Confidence 1111111111111111111 122467999999999999999999999999988 889999
Q ss_pred cCCCCCcccccChHHHHHHHHHHHhh
Q 015903 368 LPMAGHHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 368 i~~~gH~~~~e~p~~~~~~i~~fl~~ 393 (398)
++| ||+...++.+++...|.+.+..
T Consensus 211 fdG-gHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 211 FDG-GHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred ecC-cceehhhhHHHHHHHHHHHhhh
Confidence 996 9999999999999999999864
No 79
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.71 E-value=2.9e-15 Score=126.51 Aligned_cols=250 Identities=14% Similarity=0.180 Sum_probs=163.5
Q ss_pred EEEEEeccCCC--CCEEEEecCCCCCccc-hhhhh-----HhhhcCCeEEEEcCCCCCCCCCCCCCCCC-CCCHHHHHHH
Q 015903 126 RWFCVESGNAD--NHTVLLIHGFPSQAYS-YRKVL-----PVLSKNYHAIAFDWLGFGFSEKPQPGYGF-DYTLDEYVAS 196 (398)
Q Consensus 126 ~l~~~~~g~~~--~p~vvllHG~~~~~~~-~~~~~-----~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~-~~~~~~~~~d 196 (398)
.++....|+++ +|++|-.|..+-+... |..+. ..+.+.|.|+-+|-||+-.-....+. ++ -.++++++++
T Consensus 33 ~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~-~y~yPsmd~LAd~ 111 (326)
T KOG2931|consen 33 VVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPE-GYPYPSMDDLADM 111 (326)
T ss_pred cEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCC-CCCCCCHHHHHHH
Confidence 67777777655 8899999999987765 65543 44555899999999999554333222 22 3489999999
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccch-hhh
Q 015903 197 LESFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRA-SDK 275 (398)
Q Consensus 197 l~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 275 (398)
|..++++++.+.++-+|...|++|..++|..+|++|.++||+++.... +.|.......+...++....... ...
T Consensus 112 l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a-----~gwiew~~~K~~s~~l~~~Gmt~~~~d 186 (326)
T KOG2931|consen 112 LPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCA-----KGWIEWAYNKVSSNLLYYYGMTQGVKD 186 (326)
T ss_pred HHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCC-----chHHHHHHHHHHHHHHHhhchhhhHHH
Confidence 999999999999999999999999999999999999999999985543 34444443333322221111111 000
Q ss_pred h-hhc-cCC--CCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhh--------ccCCCCCCEEEEee
Q 015903 276 A-LTS-CGP--YQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTIL--------MDKSWKIPTTVCWG 343 (398)
Q Consensus 276 ~-~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~i~~Pvlii~G 343 (398)
+ +.. ++. ..-..+....|++........ .++..+++.+.... ....++||+|++.|
T Consensus 187 ~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~------------~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvG 254 (326)
T KOG2931|consen 187 YLLAHHFGKEELGNNSDIVQEYRQHLGERLNP------------KNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVG 254 (326)
T ss_pred HHHHHHhccccccccHHHHHHHHHHHHhcCCh------------hHHHHHHHHhcCCCCccccCCCcCccccccEEEEec
Confidence 0 000 000 001112222333222111110 22222222221111 01145799999999
Q ss_pred CCCCccCchhHHHHHHhc---CCcEEEcCCCCCcccccChHHHHHHHHHHHhhcc
Q 015903 344 QRDRWLNNDGVEDFCNDS---NHELIELPMAGHHVQEDSGEELGKVISEIFRKRR 395 (398)
Q Consensus 344 ~~D~~v~~~~~~~l~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 395 (398)
+..+.+ +.+.++..++ +..++.+.++|-.+..++|..+.+.++-|++..+
T Consensus 255 d~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~G 307 (326)
T KOG2931|consen 255 DNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMG 307 (326)
T ss_pred CCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCC
Confidence 988765 4667777777 7889999999999999999999999999998654
No 80
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.68 E-value=1.2e-15 Score=136.97 Aligned_cols=265 Identities=16% Similarity=0.137 Sum_probs=142.0
Q ss_pred hhhhhccceEEEeecCCCCcccCCCCccccccccccc-cCCeEEEE---Eec-cCCCCCEEEEecCCCCCccchhhhhHh
Q 015903 85 DEWFKQGKIVKAVTVSGSGETAKDPIFGLDLGSASQA-DEIFRWFC---VES-GNADNHTVLLIHGFPSQAYSYRKVLPV 159 (398)
Q Consensus 85 ~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~~~~~~-~~g~~l~~---~~~-g~~~~p~vvllHG~~~~~~~~~~~~~~ 159 (398)
..|.+..+.....|...+.+.+..+.++.++....++ .+|.+++- .+. +.++-|.||.+||.++....|...+..
T Consensus 26 ~FW~~~l~e~~~~p~~~~l~~~~~~~~~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~ 105 (320)
T PF05448_consen 26 AFWKKTLAELAAVPLDPELEPVEFPTPGVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPW 105 (320)
T ss_dssp HHHHHHHHHHHTS----EEEEES-SBSSEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcEEEEeccCCCCEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCccccccc
Confidence 4566655554444444444333334556555544444 46666553 343 334458999999999988888766665
Q ss_pred hhcCCeEEEEcCCCCCCCC-CCCC-----CCC----------CCCCHHHHHHHHHHHHHHh------CCCcEEEEEeCcC
Q 015903 160 LSKNYHAIAFDWLGFGFSE-KPQP-----GYG----------FDYTLDEYVASLESFVNEI------ANDKVSLVVQGYF 217 (398)
Q Consensus 160 L~~g~~Vi~~D~rG~G~S~-~~~~-----~~~----------~~~~~~~~~~dl~~~l~~l------~~~~v~lvG~S~G 217 (398)
-..||.|+.+|.||+|... .... ..+ ..+-+..+..|+...++.+ +.++|.+.|.|.|
T Consensus 106 a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqG 185 (320)
T PF05448_consen 106 AAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQG 185 (320)
T ss_dssp HHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHH
T ss_pred ccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCc
Confidence 5569999999999999322 1110 000 0112334455666556554 3458999999999
Q ss_pred hHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhhhhccc
Q 015903 218 SPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMVYRSPY 297 (398)
Q Consensus 218 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (398)
|.+++.+|+..| +|++++...|..... ...+..- ....+...+..++.... ..
T Consensus 186 G~lal~~aaLd~-rv~~~~~~vP~l~d~----~~~~~~~--------~~~~~y~~~~~~~~~~d--------------~~ 238 (320)
T PF05448_consen 186 GGLALAAAALDP-RVKAAAADVPFLCDF----RRALELR--------ADEGPYPEIRRYFRWRD--------------PH 238 (320)
T ss_dssp HHHHHHHHHHSS-T-SEEEEESESSSSH----HHHHHHT----------STTTHHHHHHHHHHS--------------CT
T ss_pred hHHHHHHHHhCc-cccEEEecCCCccch----hhhhhcC--------CccccHHHHHHHHhccC--------------CC
Confidence 999999999886 699999988854321 0000000 00000000000000000 00
Q ss_pred ccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc--CCcEEEcCCCCCcc
Q 015903 298 LSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS--NHELIELPMAGHHV 375 (398)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~--~~~~~~i~~~gH~~ 375 (398)
. .........+..+.......+|++|+++-.|-.|+++|+...-..+..+ .+++.+++..||..
T Consensus 239 ~--------------~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~ 304 (320)
T PF05448_consen 239 H--------------EREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEY 304 (320)
T ss_dssp H--------------CHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SST
T ss_pred c--------------ccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCc
Confidence 0 0001112222233333445678999999999999999999999999999 88999999999953
Q ss_pred cccChHHH-HHHHHHHHhhc
Q 015903 376 QEDSGEEL-GKVISEIFRKR 394 (398)
Q Consensus 376 ~~e~p~~~-~~~i~~fl~~~ 394 (398)
..++ .+...+||.++
T Consensus 305 ----~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 305 ----GPEFQEDKQLNFLKEH 320 (320)
T ss_dssp ----THHHHHHHHHHHHHH-
T ss_pred ----hhhHHHHHHHHHHhcC
Confidence 3444 77788888764
No 81
>PRK10115 protease 2; Provisional
Probab=99.67 E-value=1.8e-15 Score=149.91 Aligned_cols=190 Identities=12% Similarity=0.056 Sum_probs=130.3
Q ss_pred CCCCEEEEecCCCCCcc--chhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHH--hC
Q 015903 135 ADNHTVLLIHGFPSQAY--SYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPG----YGFDYTLDEYVASLESFVNE--IA 205 (398)
Q Consensus 135 ~~~p~vvllHG~~~~~~--~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~----~~~~~~~~~~~~dl~~~l~~--l~ 205 (398)
++.|+||++||+.+... .|......|.+ ||.|+.++.||.|+-...... .....+++|+++.++.+++. .+
T Consensus 443 ~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d 522 (686)
T PRK10115 443 GHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGS 522 (686)
T ss_pred CCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCC
Confidence 34699999999976654 46555555555 999999999998766532111 01135677777777777665 24
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCC----CCchhHHHhHHhhhhhhccCCccchhhhhhhccC
Q 015903 206 NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHA----NLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCG 281 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (398)
.+++.+.|.|+||+++...+.++|++++++|+..|..+.... ..+...
T Consensus 523 ~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~---------------------------- 574 (686)
T PRK10115 523 PSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTT---------------------------- 574 (686)
T ss_pred hHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCCh----------------------------
Confidence 578999999999999999999999999999999987654310 000000
Q ss_pred CCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCC-EEEEeeCCCCccCchhHHHHHHh
Q 015903 282 PYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIP-TTVCWGQRDRWLNNDGVEDFCND 360 (398)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-vlii~G~~D~~v~~~~~~~l~~~ 360 (398)
.....+-.+ .......++...+++....+++.| +|+++|.+|..||+.++.++..+
T Consensus 575 ------~~~~e~G~p-----------------~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~ 631 (686)
T PRK10115 575 ------GEFEEWGNP-----------------QDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAK 631 (686)
T ss_pred ------hHHHHhCCC-----------------CCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHH
Confidence 000000000 001123444556666667788999 56779999999999999999988
Q ss_pred c-----CCcEEEc---CCCCCcc
Q 015903 361 S-----NHELIEL---PMAGHHV 375 (398)
Q Consensus 361 ~-----~~~~~~i---~~~gH~~ 375 (398)
+ +.+++++ +++||..
T Consensus 632 Lr~~~~~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 632 LRELKTDDHLLLLCTDMDSGHGG 654 (686)
T ss_pred HHhcCCCCceEEEEecCCCCCCC
Confidence 8 5677888 8999984
No 82
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.65 E-value=8.2e-15 Score=125.44 Aligned_cols=107 Identities=9% Similarity=-0.007 Sum_probs=73.6
Q ss_pred CCCEEEEecCCCCCccchh---hhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCC------CCCCHHHHHHHHHHHHHHhC
Q 015903 136 DNHTVLLIHGFPSQAYSYR---KVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYG------FDYTLDEYVASLESFVNEIA 205 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~~---~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~------~~~~~~~~~~dl~~~l~~l~ 205 (398)
..|+||++||++++...|. .+...+.+ ||.|+++|++|++.+......+. ......++.+.+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4689999999998777664 34444444 99999999999875432111000 01112333333333333333
Q ss_pred --CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcC
Q 015903 206 --NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPL 242 (398)
Q Consensus 206 --~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 242 (398)
.++++|+|||+||.+++.++.++|+.+.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 3589999999999999999999999999999888754
No 83
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.63 E-value=2.4e-14 Score=113.65 Aligned_cols=179 Identities=16% Similarity=0.232 Sum_probs=125.4
Q ss_pred eEEEEEeccCCCCCEEEEecCCC-----CCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 015903 125 FRWFCVESGNADNHTVLLIHGFP-----SQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLE 198 (398)
Q Consensus 125 ~~l~~~~~g~~~~p~vvllHG~~-----~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~ 198 (398)
+...|.....+..|..|++|--+ .+...-..++..|.+ ||.++.+|+||.|+|...... ..-+ .+|..
T Consensus 16 le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~-----GiGE-~~Da~ 89 (210)
T COG2945 16 LEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN-----GIGE-LEDAA 89 (210)
T ss_pred ceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC-----Ccch-HHHHH
Confidence 34445554445568888888654 222334556667777 999999999999999987652 2222 24555
Q ss_pred HHHHHhC---CC-c-EEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchh
Q 015903 199 SFVNEIA---ND-K-VSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRAS 273 (398)
Q Consensus 199 ~~l~~l~---~~-~-v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (398)
+.+++++ .+ + +.+.|+|+|++|++.+|.+.|+ ....+.+.|+....
T Consensus 90 aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~---------------------------- 140 (210)
T COG2945 90 AALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY---------------------------- 140 (210)
T ss_pred HHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch----------------------------
Confidence 5555553 22 2 4678999999999999999875 44445444433200
Q ss_pred hhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchh
Q 015903 274 DKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDG 353 (398)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~ 353 (398)
...+ + ....+|.++|+|+.|.+++...
T Consensus 141 --------------------dfs~---------------------------l------~P~P~~~lvi~g~~Ddvv~l~~ 167 (210)
T COG2945 141 --------------------DFSF---------------------------L------APCPSPGLVIQGDADDVVDLVA 167 (210)
T ss_pred --------------------hhhh---------------------------c------cCCCCCceeEecChhhhhcHHH
Confidence 0000 0 1227899999999999999888
Q ss_pred HHHHHHhcCCcEEEcCCCCCcccccChHHHHHHHHHHHh
Q 015903 354 VEDFCNDSNHELIELPMAGHHVQEDSGEELGKVISEIFR 392 (398)
Q Consensus 354 ~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 392 (398)
..++.+....+++++++++|+++ .+-..+.+.|.+||.
T Consensus 168 ~l~~~~~~~~~~i~i~~a~HFF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 168 VLKWQESIKITVITIPGADHFFH-GKLIELRDTIADFLE 205 (210)
T ss_pred HHHhhcCCCCceEEecCCCceec-ccHHHHHHHHHHHhh
Confidence 88888777889999999999876 567889999999995
No 84
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.63 E-value=3.9e-15 Score=129.28 Aligned_cols=143 Identities=17% Similarity=0.274 Sum_probs=116.2
Q ss_pred hhhhccceEEEeecCCCCcccCCCCccccccccccccCCeEEEEEeccCCCCCEEEEecCCCCCccchhhhhHhhhc---
Q 015903 86 EWFKQGKIVKAVTVSGSGETAKDPIFGLDLGSASQADEIFRWFCVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSK--- 162 (398)
Q Consensus 86 ~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~~~~~~~~g~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~--- 162 (398)
.|..++...+.+++..+. +.|+++++..+.+... . ...+-.++|++|||+|+.+.|..+++.|.+
T Consensus 113 ~W~e~e~~ln~f~qykTe------IeGL~iHFlhvk~p~~-----k-~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~ 180 (469)
T KOG2565|consen 113 KWKEREEFLNQFKQYKTE------IEGLKIHFLHVKPPQK-----K-KKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKR 180 (469)
T ss_pred cHHHHHHHHHhhhhhhhh------hcceeEEEEEecCCcc-----c-cCCcccceEEecCCCchHHHHHhhhhhhcCccc
Confidence 388899999999988886 7776665333322111 0 111235899999999999999999998865
Q ss_pred -------CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceE
Q 015903 163 -------NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDL 235 (398)
Q Consensus 163 -------g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~l 235 (398)
-|.||++.+||+|.|+.+... .++....+.-+..++-.+|.+++.|-|..+|+.|+..+|..+|++|.|+
T Consensus 181 hg~~~d~~FEVI~PSlPGygwSd~~sk~---GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~Gl 257 (469)
T KOG2565|consen 181 HGNESDYAFEVIAPSLPGYGWSDAPSKT---GFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGL 257 (469)
T ss_pred cCCccceeEEEeccCCCCcccCcCCccC---CccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHh
Confidence 289999999999999998875 6788999999999999999999999999999999999999999999988
Q ss_pred EEECCcCc
Q 015903 236 ILLNPPLT 243 (398)
Q Consensus 236 vl~~~~~~ 243 (398)
-+..+...
T Consensus 258 Hlnm~~~~ 265 (469)
T KOG2565|consen 258 HLNMCFVN 265 (469)
T ss_pred hhcccccC
Confidence 77665443
No 85
>COG0400 Predicted esterase [General function prediction only]
Probab=99.62 E-value=1.5e-14 Score=120.60 Aligned_cols=176 Identities=12% Similarity=0.069 Sum_probs=119.4
Q ss_pred cCCCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCC--CCCCCCCCCCCCCCCCHHH-------HHHHHHHHHHH
Q 015903 133 GNADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLG--FGFSEKPQPGYGFDYTLDE-------YVASLESFVNE 203 (398)
Q Consensus 133 g~~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG--~G~S~~~~~~~~~~~~~~~-------~~~dl~~~l~~ 203 (398)
+++..|+||++||+|++...+.+....+..++.++.+.-+= .|.-..........++.++ +++-+..+.++
T Consensus 14 ~~p~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 14 GDPAAPLLILLHGLGGDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCCCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 34556899999999999999888666666677666653221 0110000000001233333 33444444455
Q ss_pred hCC--CcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccC
Q 015903 204 IAN--DKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCG 281 (398)
Q Consensus 204 l~~--~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (398)
.++ ++++++|+|-||.+++.+..++|+.++++|++++........
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~--------------------------------- 140 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL--------------------------------- 140 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc---------------------------------
Confidence 555 789999999999999999999999999999999865433100
Q ss_pred CCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc
Q 015903 282 PYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS 361 (398)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~ 361 (398)
. . ..-..|+++++|+.|+++|...+.++.+.+
T Consensus 141 -------------~---------------------------~--------~~~~~pill~hG~~Dpvvp~~~~~~l~~~l 172 (207)
T COG0400 141 -------------L---------------------------P--------DLAGTPILLSHGTEDPVVPLALAEALAEYL 172 (207)
T ss_pred -------------c---------------------------c--------ccCCCeEEEeccCcCCccCHHHHHHHHHHH
Confidence 0 0 001799999999999999999988888877
Q ss_pred -----CCcEEEcCCCCCcccccChHHHHHHHHHHHhhc
Q 015903 362 -----NHELIELPMAGHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 362 -----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
+++..+++ .||.... +..+.+.+|+.+.
T Consensus 173 ~~~g~~v~~~~~~-~GH~i~~----e~~~~~~~wl~~~ 205 (207)
T COG0400 173 TASGADVEVRWHE-GGHEIPP----EELEAARSWLANT 205 (207)
T ss_pred HHcCCCEEEEEec-CCCcCCH----HHHHHHHHHHHhc
Confidence 77888888 7997654 4455566677653
No 86
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.62 E-value=5.8e-15 Score=127.08 Aligned_cols=181 Identities=18% Similarity=0.258 Sum_probs=114.7
Q ss_pred cCCCCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCC-C------CCHHHHHHHHHHHHHHh
Q 015903 133 GNADNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGF-D------YTLDEYVASLESFVNEI 204 (398)
Q Consensus 133 g~~~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~-~------~~~~~~~~dl~~~l~~l 204 (398)
+.++.|.||++|++.|-....+.+++.|++ ||.|+++|+-+-............ . ...+...+++.+.++.+
T Consensus 10 ~~~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l 89 (218)
T PF01738_consen 10 GGGPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYL 89 (218)
T ss_dssp TSSSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 333468999999998877667788889988 999999998643330111100000 0 01234566776667766
Q ss_pred C------CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhh
Q 015903 205 A------NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALT 278 (398)
Q Consensus 205 ~------~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (398)
. .+++.++|+|+||.+++.+|.+. +.++++|..-|.....
T Consensus 90 ~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~--------------------------------- 135 (218)
T PF01738_consen 90 RAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPP--------------------------------- 135 (218)
T ss_dssp HCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGG---------------------------------
T ss_pred HhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCC---------------------------------
Confidence 2 35899999999999999999877 6799988876611000
Q ss_pred ccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHH
Q 015903 279 SCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFC 358 (398)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~ 358 (398)
..... ..++++|+++++|++|+.++.+..+.+.
T Consensus 136 -----------------------------------------~~~~~------~~~~~~P~l~~~g~~D~~~~~~~~~~~~ 168 (218)
T PF01738_consen 136 -----------------------------------------PPLED------APKIKAPVLILFGENDPFFPPEEVEALE 168 (218)
T ss_dssp -----------------------------------------GHHHH------GGG--S-EEEEEETT-TTS-HHHHHHHH
T ss_pred -----------------------------------------cchhh------hcccCCCEeecCccCCCCCChHHHHHHH
Confidence 00000 0244899999999999999999877777
Q ss_pred Hhc-----CCcEEEcCCCCCcccccC--------hHHHHHHHHHHHhhc
Q 015903 359 NDS-----NHELIELPMAGHHVQEDS--------GEELGKVISEIFRKR 394 (398)
Q Consensus 359 ~~~-----~~~~~~i~~~gH~~~~e~--------p~~~~~~i~~fl~~~ 394 (398)
+.+ ..++++++|++|.+.... .++..+.+.+||+++
T Consensus 169 ~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 169 EALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp HHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred HHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 766 678999999999886432 145577888888764
No 87
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.62 E-value=2e-14 Score=123.36 Aligned_cols=179 Identities=17% Similarity=0.157 Sum_probs=107.5
Q ss_pred CCCCCEEEEecCCCCCccchhhhhH-hhhc-CCeEEEEcCCC------CCC---CCCCCCCCC--C---CCCHHHHHHHH
Q 015903 134 NADNHTVLLIHGFPSQAYSYRKVLP-VLSK-NYHAIAFDWLG------FGF---SEKPQPGYG--F---DYTLDEYVASL 197 (398)
Q Consensus 134 ~~~~p~vvllHG~~~~~~~~~~~~~-~L~~-g~~Vi~~D~rG------~G~---S~~~~~~~~--~---~~~~~~~~~dl 197 (398)
.+..++||++||+|.+...|..+.. .+.. ...++.++-|- .|. +-....... . ...+.+.++.+
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 3447899999999999977765555 2222 67777765441 122 111000000 0 11233334445
Q ss_pred HHHHHHh-----CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccch
Q 015903 198 ESFVNEI-----ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRA 272 (398)
Q Consensus 198 ~~~l~~l-----~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (398)
.++++.. +.++++++|+|.||.+++.++.++|+.+.++|++++........
T Consensus 91 ~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~------------------------ 146 (216)
T PF02230_consen 91 DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL------------------------ 146 (216)
T ss_dssp HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC------------------------
T ss_pred HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc------------------------
Confidence 5555542 34689999999999999999999999999999999865332000
Q ss_pred hhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCch
Q 015903 273 SDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNND 352 (398)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~ 352 (398)
.... . ..-++|++++||++|+++|.+
T Consensus 147 ---------------------~~~~--------------------------------~-~~~~~pi~~~hG~~D~vvp~~ 172 (216)
T PF02230_consen 147 ---------------------EDRP--------------------------------E-ALAKTPILIIHGDEDPVVPFE 172 (216)
T ss_dssp ---------------------HCCH--------------------------------C-CCCTS-EEEEEETT-SSSTHH
T ss_pred ---------------------cccc--------------------------------c-ccCCCcEEEEecCCCCcccHH
Confidence 0000 0 000689999999999999999
Q ss_pred hHHHHHHhc-----CCcEEEcCCCCCcccccChHHHHHHHHHHHhhc
Q 015903 353 GVEDFCNDS-----NHELIELPMAGHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 353 ~~~~l~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
.++...+.+ +++++++++.||.+. .+..+.+.+||+++
T Consensus 173 ~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 173 WAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 888888777 578999999999764 45566788888764
No 88
>PRK10162 acetyl esterase; Provisional
Probab=99.58 E-value=6.8e-14 Score=127.09 Aligned_cols=210 Identities=13% Similarity=0.138 Sum_probs=122.9
Q ss_pred CCCEEEEecCCC---CCccchhhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHH---HHHHHHHhCC-
Q 015903 136 DNHTVLLIHGFP---SQAYSYRKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVAS---LESFVNEIAN- 206 (398)
Q Consensus 136 ~~p~vvllHG~~---~~~~~~~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~d---l~~~l~~l~~- 206 (398)
..|+||++||++ ++...|..+...|++ |+.|+.+|+|.......+ ...+|..+. +.+..+.++.
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p-------~~~~D~~~a~~~l~~~~~~~~~d 152 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFP-------QAIEEIVAVCCYFHQHAEDYGIN 152 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCC-------CcHHHHHHHHHHHHHhHHHhCCC
Confidence 468999999987 566678888888876 999999999976543222 224444333 3333444554
Q ss_pred -CcEEEEEeCcChHHHHHHHHhC------CCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhc
Q 015903 207 -DKVSLVVQGYFSPVVVKYASKH------KDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTS 279 (398)
Q Consensus 207 -~~v~lvG~S~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (398)
++++|+|+|+||.+++.++... +.+++++|++.|...... .+.. .. . ....
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~--~~s~-~~-----~----~~~~---------- 210 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRD--SVSR-RL-----L----GGVW---------- 210 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCC--ChhH-HH-----h----CCCc----------
Confidence 5899999999999999998753 357899999988665321 1000 00 0 0000
Q ss_pred cCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHH
Q 015903 280 CGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCN 359 (398)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~ 359 (398)
..+.......+...+.......... +. .. ...++ .+.-.|+++++|+.|.+.+ ..+.+.+
T Consensus 211 ---~~l~~~~~~~~~~~y~~~~~~~~~p--~~----~p---~~~~l------~~~lPp~~i~~g~~D~L~d--e~~~~~~ 270 (318)
T PRK10162 211 ---DGLTQQDLQMYEEAYLSNDADRESP--YY----CL---FNNDL------TRDVPPCFIAGAEFDPLLD--DSRLLYQ 270 (318)
T ss_pred ---cccCHHHHHHHHHHhCCCccccCCc--cc----Cc---chhhh------hcCCCCeEEEecCCCcCcC--hHHHHHH
Confidence 0011111111111111100000000 00 00 00011 0113699999999999864 5566666
Q ss_pred hc-----CCcEEEcCCCCCcccc-----cChHHHHHHHHHHHhhc
Q 015903 360 DS-----NHELIELPMAGHHVQE-----DSGEELGKVISEIFRKR 394 (398)
Q Consensus 360 ~~-----~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 394 (398)
++ .+++++++|..|.+.. +..++..+.+.+||++.
T Consensus 271 ~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 271 TLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred HHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 66 7899999999997642 23456777788888764
No 89
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.58 E-value=2.8e-14 Score=129.08 Aligned_cols=220 Identities=14% Similarity=0.117 Sum_probs=115.0
Q ss_pred eccCCCCCEEEEecCCCCCccchhh-hhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C
Q 015903 131 ESGNADNHTVLLIHGFPSQAYSYRK-VLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI---A 205 (398)
Q Consensus 131 ~~g~~~~p~vvllHG~~~~~~~~~~-~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---~ 205 (398)
+.+....|+||++.|+-+-...+.. +.+.|.+ |+.++++|.||.|.|....-. .+.+.+.+.+.+.+... +
T Consensus 184 P~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~----~D~~~l~~aVLd~L~~~p~VD 259 (411)
T PF06500_consen 184 PSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT----QDSSRLHQAVLDYLASRPWVD 259 (411)
T ss_dssp SSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-----S-CCHHHHHHHHHHHHSTTEE
T ss_pred CCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC----cCHHHHHHHHHHHHhcCCccC
Confidence 3344445778887777776666544 4466765 999999999999998643321 22234445555555443 4
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCC
Q 015903 206 NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQM 285 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (398)
.++|.++|.|+||++|+++|..+++|++++|.++++....... . ......+....+.+....+....
T Consensus 260 ~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~-~------------~~~~~~P~my~d~LA~rlG~~~~ 326 (411)
T PF06500_consen 260 HTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTD-P------------EWQQRVPDMYLDVLASRLGMAAV 326 (411)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH--H------------HHHTTS-HHHHHHHHHHCT-SCE
T ss_pred hhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhcc-H------------HHHhcCCHHHHHHHHHHhCCccC
Confidence 5689999999999999999999999999999999975432100 0 00000000000000000000000
Q ss_pred ChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCc
Q 015903 286 KEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHE 364 (398)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~ 364 (398)
..+........+. -....++...+.++|+|.+.|++|+++|.+..+-++..- +.+
T Consensus 327 ~~~~l~~el~~~S------------------------Lk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk 382 (411)
T PF06500_consen 327 SDESLRGELNKFS------------------------LKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGK 382 (411)
T ss_dssp -HHHHHHHGGGGS------------------------TTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-E
T ss_pred CHHHHHHHHHhcC------------------------cchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCc
Confidence 0000000000000 000011112456899999999999999999998888877 788
Q ss_pred EEEcCCCCCcccccChHHHHHHHHHHHhhc
Q 015903 365 LIELPMAGHHVQEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 365 ~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 394 (398)
...++... ....-+.-...+.+||++.
T Consensus 383 ~~~~~~~~---~~~gy~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 383 ALRIPSKP---LHMGYPQALDEIYKWLEDK 409 (411)
T ss_dssp EEEE-SSS---HHHHHHHHHHHHHHHHHHH
T ss_pred eeecCCCc---cccchHHHHHHHHHHHHHh
Confidence 88888644 1223345666777787753
No 90
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.58 E-value=2e-13 Score=117.73 Aligned_cols=184 Identities=17% Similarity=0.205 Sum_probs=135.8
Q ss_pred EEeccCCCCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCC-CCCCCCCCC----CC---CCCCHHHHHHHHHH
Q 015903 129 CVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGF-GFSEKPQPG----YG---FDYTLDEYVASLES 199 (398)
Q Consensus 129 ~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~-G~S~~~~~~----~~---~~~~~~~~~~dl~~ 199 (398)
..+.+....|.||++|++.+-....+.+.+.|+. ||.|+++|+-+. |.+...... .. ...+..+...|+.+
T Consensus 19 a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a 98 (236)
T COG0412 19 ARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDA 98 (236)
T ss_pred ecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHH
Confidence 3344444348999999999988899999999999 999999999864 333222211 00 01233677888888
Q ss_pred HHHHhC------CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchh
Q 015903 200 FVNEIA------NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRAS 273 (398)
Q Consensus 200 ~l~~l~------~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (398)
.++.+. .++|.++|+||||.+++.++.+.| .+++.+..-+.......
T Consensus 99 ~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~-------------------------- 151 (236)
T COG0412 99 ALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDT-------------------------- 151 (236)
T ss_pred HHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCcc--------------------------
Confidence 888873 457999999999999999999887 78888877664321100
Q ss_pred hhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchh
Q 015903 274 DKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDG 353 (398)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~ 353 (398)
....++++|+|+.+|+.|..+|...
T Consensus 152 -------------------------------------------------------~~~~~~~~pvl~~~~~~D~~~p~~~ 176 (236)
T COG0412 152 -------------------------------------------------------ADAPKIKVPVLLHLAGEDPYIPAAD 176 (236)
T ss_pred -------------------------------------------------------cccccccCcEEEEecccCCCCChhH
Confidence 0013559999999999999999998
Q ss_pred HHHHHHhc-----CCcEEEcCCCCCcccccC-----------hHHHHHHHHHHHhhc
Q 015903 354 VEDFCNDS-----NHELIELPMAGHHVQEDS-----------GEELGKVISEIFRKR 394 (398)
Q Consensus 354 ~~~l~~~~-----~~~~~~i~~~gH~~~~e~-----------p~~~~~~i~~fl~~~ 394 (398)
.+.+.+.+ ..++.+++++.|.++.+. .+.-++.+.+|+++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 177 VDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred HHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 88888777 467899999999887432 245677888888765
No 91
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.57 E-value=2.9e-13 Score=123.82 Aligned_cols=249 Identities=12% Similarity=0.155 Sum_probs=147.2
Q ss_pred CEEEEecCCCCCccch-hhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCc
Q 015903 138 HTVLLIHGFPSQAYSY-RKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGY 216 (398)
Q Consensus 138 p~vvllHG~~~~~~~~-~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~ 216 (398)
|+||++.-+.+..... +.+++.|.+|+.|+..|+..-+....... .++++|+++.|.++++++|.+ ++++|+|+
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~----~f~ldDYi~~l~~~i~~~G~~-v~l~GvCq 177 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAG----KFDLEDYIDYLIEFIRFLGPD-IHVIAVCQ 177 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcC----CCCHHHHHHHHHHHHHHhCCC-CcEEEEch
Confidence 7999999888666655 56677777799999999987764433232 578999999999999999877 99999999
Q ss_pred ChHHHHHHHHhC-----CCccceEEEECCcCcccCCCCchhHHHh---------HHhhhhhhc------c--CCccchhh
Q 015903 217 FSPVVVKYASKH-----KDKLKDLILLNPPLTAKHANLPSTLSIF---------SNFLLGEIF------S--QDPLRASD 274 (398)
Q Consensus 217 Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~------~--~~~~~~~~ 274 (398)
||..++.+++.. |++++.+++++++.+.... +.....+ ........- . ..+-....
T Consensus 178 gG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~--p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~ 255 (406)
T TIGR01849 178 PAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARAS--PTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQL 255 (406)
T ss_pred hhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCC--CchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHH
Confidence 999977776654 6679999999999887632 1211111 111111000 0 00000000
Q ss_pred hhhhccCCCCCChhhhhhhhcccc-cCCCchhHH----HHHHHhhhhhHHHHHHHHHHh-----------------hccC
Q 015903 275 KALTSCGPYQMKEDDAMVYRSPYL-SSGSSGFAL----TAISKGMKKQLKQYVEEMRTI-----------------LMDK 332 (398)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-----------------~~~~ 332 (398)
..+....+..........+ ..+. ......... +.+...+...-..+.+.+..+ ...+
T Consensus 256 ~~F~~mnp~r~~~~~~~~~-~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~ 334 (406)
T TIGR01849 256 AGFISMNLDRHTKAHSDFF-LHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPG 334 (406)
T ss_pred HHHHHcCcchHHHHHHHHH-HHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHH
Confidence 0011111111000000011 1111 000000010 001111111111111111111 1336
Q ss_pred CCC-CCEEEEeeCCCCccCchhHHHHHHhc------CCcEEEcCCCCCccccc---ChHHHHHHHHHHHhhc
Q 015903 333 SWK-IPTTVCWGQRDRWLNNDGVEDFCNDS------NHELIELPMAGHHVQED---SGEELGKVISEIFRKR 394 (398)
Q Consensus 333 ~i~-~Pvlii~G~~D~~v~~~~~~~l~~~~------~~~~~~i~~~gH~~~~e---~p~~~~~~i~~fl~~~ 394 (398)
+|+ +|+|.|.|++|.++|+.+++.+.+.+ ..+.++.+++||...+- -++++...|.+||.++
T Consensus 335 ~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 335 AITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred HCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 778 99999999999999999998888874 45577787899987543 4578999999999864
No 92
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.56 E-value=8.3e-14 Score=116.38 Aligned_cols=263 Identities=12% Similarity=0.102 Sum_probs=155.1
Q ss_pred hhhhhccceEEEeecCCCCcccCCCCccccccccccc-cCCeEEEEEe----ccCCCCCEEEEecCCCCCccchhhhhHh
Q 015903 85 DEWFKQGKIVKAVTVSGSGETAKDPIFGLDLGSASQA-DEIFRWFCVE----SGNADNHTVLLIHGFPSQAYSYRKVLPV 159 (398)
Q Consensus 85 ~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~~~~~~-~~g~~l~~~~----~g~~~~p~vvllHG~~~~~~~~~~~~~~ 159 (398)
..|.+.-+.....+.....+.++-+..+.+.-..+.+ .+|.++.-+- .+++..|.||-.||+++..+.|..++..
T Consensus 26 eFW~~~l~e~~~~~~~p~l~~~d~~~~~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~w 105 (321)
T COG3458 26 EFWKKTLEEARKVPPEPVLERSDFTLPRVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHW 105 (321)
T ss_pred HHHHHHHHHHhcCCCCceEEeccccCCceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccc
Confidence 4566655555555544444344334444443333333 3555554332 1224469999999999999999888776
Q ss_pred hhcCCeEEEEcCCCCCCCCC----CCCC---CC----------CCCCHHHHHHHHHHHHHH------hCCCcEEEEEeCc
Q 015903 160 LSKNYHAIAFDWLGFGFSEK----PQPG---YG----------FDYTLDEYVASLESFVNE------IANDKVSLVVQGY 216 (398)
Q Consensus 160 L~~g~~Vi~~D~rG~G~S~~----~~~~---~~----------~~~~~~~~~~dl~~~l~~------l~~~~v~lvG~S~ 216 (398)
-..||.|+.+|.||.|.|.. +... .| ..|-+.....|+..+++. .+.+++.+.|.|.
T Consensus 106 a~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~Sq 185 (321)
T COG3458 106 AVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQ 185 (321)
T ss_pred cccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEecccc
Confidence 66799999999999998843 1111 00 011122233344444433 3567999999999
Q ss_pred ChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhhhhcc
Q 015903 217 FSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMVYRSP 296 (398)
Q Consensus 217 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (398)
||.+++..+...| +++++++.-|...... .+.. +....+...+..++....+
T Consensus 186 GGglalaaaal~~-rik~~~~~~Pfl~df~----r~i~---------~~~~~~ydei~~y~k~h~~-------------- 237 (321)
T COG3458 186 GGGLALAAAALDP-RIKAVVADYPFLSDFP----RAIE---------LATEGPYDEIQTYFKRHDP-------------- 237 (321)
T ss_pred CchhhhhhhhcCh-hhhcccccccccccch----hhee---------ecccCcHHHHHHHHHhcCc--------------
Confidence 9999999998876 8999888877543321 0000 0000111111111110000
Q ss_pred cccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc--CCcEEEcCCCCCc
Q 015903 297 YLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS--NHELIELPMAGHH 374 (398)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~--~~~~~~i~~~gH~ 374 (398)
. .......+.-+.....+.+|++|+|+..|-.|+++|+...-..++++ ..++.+++.-+|.
T Consensus 238 -------~----------e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe 300 (321)
T COG3458 238 -------K----------EAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHE 300 (321)
T ss_pred -------h----------HHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccc
Confidence 0 00111122222222233566999999999999999999999999988 7888888876775
Q ss_pred ccccChHHHHHHHHHHHhhcc
Q 015903 375 VQEDSGEELGKVISEIFRKRR 395 (398)
Q Consensus 375 ~~~e~p~~~~~~i~~fl~~~~ 395 (398)
- -|.-..+.+..|++...
T Consensus 301 ~---~p~~~~~~~~~~l~~l~ 318 (321)
T COG3458 301 G---GPGFQSRQQVHFLKILF 318 (321)
T ss_pred c---CcchhHHHHHHHHHhhc
Confidence 4 34444555666766543
No 93
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.56 E-value=3.6e-13 Score=126.71 Aligned_cols=104 Identities=13% Similarity=0.221 Sum_probs=85.5
Q ss_pred CCCEEEEecCCCCCccch-----hhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----C
Q 015903 136 DNHTVLLIHGFPSQAYSY-----RKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI----A 205 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~-----~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~ 205 (398)
.+++||+++.+-...+.| ..+++.|.+ ||.|+++|+++-+.... ..+++++++.+.+.++.+ +
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r-------~~~ldDYv~~i~~Ald~V~~~tG 286 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR-------EWGLSTYVDALKEAVDAVRAITG 286 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc-------CCCHHHHHHHHHHHHHHHHHhcC
Confidence 357999999998666666 467788777 99999999998766542 467889888888777765 6
Q ss_pred CCcEEEEEeCcChHHHHH----HHHhCCC-ccceEEEECCcCcccC
Q 015903 206 NDKVSLVVQGYFSPVVVK----YASKHKD-KLKDLILLNPPLTAKH 246 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~----~a~~~p~-~v~~lvl~~~~~~~~~ 246 (398)
.+++.++|+|+||.+++. +++++++ +|++++++.++.+...
T Consensus 287 ~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~ 332 (560)
T TIGR01839 287 SRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTM 332 (560)
T ss_pred CCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCC
Confidence 789999999999999997 7888886 8999999999887653
No 94
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.56 E-value=4e-13 Score=116.67 Aligned_cols=215 Identities=14% Similarity=0.210 Sum_probs=132.9
Q ss_pred CEEEEecCCCCCccchhhhhHhhhcC-CeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-cEEEEEeC
Q 015903 138 HTVLLIHGFPSQAYSYRKVLPVLSKN-YHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIAND-KVSLVVQG 215 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~~~~~L~~g-~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~-~v~lvG~S 215 (398)
++|+++|+++++...|..+++.|... +.|+.++.+|.+..... ..+++++++...+.|.....+ ++.|+|||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~------~~si~~la~~y~~~I~~~~~~gp~~L~G~S 74 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPP------PDSIEELASRYAEAIRARQPEGPYVLAGWS 74 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHE------ESSHHHHHHHHHHHHHHHTSSSSEEEEEET
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCC------CCCHHHHHHHHHHHhhhhCCCCCeeehccC
Confidence 47999999999999999999999986 99999999999833322 357999999988888877666 99999999
Q ss_pred cChHHHHHHHHhC---CCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhh
Q 015903 216 YFSPVVVKYASKH---KDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMV 292 (398)
Q Consensus 216 ~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (398)
+||.+|..+|.+- ...+..+++++++..... ................+ ..
T Consensus 75 ~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~-~~~~~~~~~~~~~~~~~-------------~~------------- 127 (229)
T PF00975_consen 75 FGGILAFEMARQLEEAGEEVSRLILIDSPPPSIK-ERPRSREPSDEQFIEEL-------------RR------------- 127 (229)
T ss_dssp HHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCH-SCHHHHHCHHHHHHHHH-------------HH-------------
T ss_pred ccHHHHHHHHHHHHHhhhccCceEEecCCCCCcc-cchhhhhhhHHHHHHHH-------------HH-------------
Confidence 9999999999764 346999999997543220 00000000000000000 00
Q ss_pred hhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCC---CCCEEEEeeCCCCccCch---hHHHHHHhc--CCc
Q 015903 293 YRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSW---KIPTTVCWGQRDRWLNND---GVEDFCNDS--NHE 364 (398)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~Pvlii~G~~D~~v~~~---~~~~l~~~~--~~~ 364 (398)
......... ........+............... ...+ .+|.++....+|+..... ....+.+.. ..+
T Consensus 128 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 202 (229)
T PF00975_consen 128 IGGTPDASL----EDEELLARLLRALRDDFQALENYS-IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVE 202 (229)
T ss_dssp HCHHHHHHC----HHHHHHHHHHHHHHHHHHHHHTCS--TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEE
T ss_pred hcCCchhhh----cCHHHHHHHHHHHHHHHHHHhhcc-CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcE
Confidence 000000000 000000111111111111111110 1111 456888889999887766 233466666 567
Q ss_pred EEEcCCCCCccccc-ChHHHHHHHHHHH
Q 015903 365 LIELPMAGHHVQED-SGEELGKVISEIF 391 (398)
Q Consensus 365 ~~~i~~~gH~~~~e-~p~~~~~~i~~fl 391 (398)
++.++| +|+.++. +..++.+.|.++|
T Consensus 203 ~~~v~G-~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 203 VHDVPG-DHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp EEEESS-ETTGHHSTTHHHHHHHHHHHH
T ss_pred EEEEcC-CCcEecchHHHHHHHHHhccC
Confidence 888986 9998776 7788999888876
No 95
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.55 E-value=1.6e-13 Score=134.04 Aligned_cols=117 Identities=15% Similarity=0.078 Sum_probs=88.0
Q ss_pred CCeEEEE---EeccCCCCCEEEEecCCCCCcc---ch-hhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHH
Q 015903 123 EIFRWFC---VESGNADNHTVLLIHGFPSQAY---SY-RKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYV 194 (398)
Q Consensus 123 ~g~~l~~---~~~g~~~~p~vvllHG~~~~~~---~~-~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 194 (398)
||.++++ .+.+.+..|+||++||++.+.. .+ ......|.+ ||.|+++|+||+|.|...... +. ...+
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~----~~-~~~~ 79 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL----LG-SDEA 79 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe----cC-cccc
Confidence 5666663 3334445689999999987653 22 223445555 999999999999999876532 22 4567
Q ss_pred HHHHHHHHHhC-----CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcc
Q 015903 195 ASLESFVNEIA-----NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 195 ~dl~~~l~~l~-----~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 244 (398)
+|+.++++++. ..++.++|+|+||.+++.+|..+|++++++|..++..+.
T Consensus 80 ~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred hHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 78888888763 258999999999999999999999999999998886543
No 96
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.54 E-value=6.7e-14 Score=114.14 Aligned_cols=154 Identities=19% Similarity=0.339 Sum_probs=101.6
Q ss_pred EEEecCCCCCc-cchhhhh-HhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcC
Q 015903 140 VLLIHGFPSQA-YSYRKVL-PVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYF 217 (398)
Q Consensus 140 vvllHG~~~~~-~~~~~~~-~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~G 217 (398)
|+++||++++. ..|.... ..|...++|-..|+ . ..+.+++...+.+.+...+ ++++|||||+|
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~------~--------~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLG 65 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW------D--------NPDLDEWVQALDQAIDAID-EPTILVAHSLG 65 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--------T--------S--HHHHHHHHHHCCHC-T-TTEEEEEETHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc------C--------CCCHHHHHHHHHHHHhhcC-CCeEEEEeCHH
Confidence 68999998764 5676655 55555677777666 1 2457888888888877653 56999999999
Q ss_pred hHHHHHHH-HhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhhhhcc
Q 015903 218 SPVVVKYA-SKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMVYRSP 296 (398)
Q Consensus 218 g~ia~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (398)
+..++.++ ...+.+|.+++|++|+.......... . ...
T Consensus 66 c~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~-------------------------------------~----~~~ 104 (171)
T PF06821_consen 66 CLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPP-------------------------------------E----LDG 104 (171)
T ss_dssp HHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTC-------------------------------------G----GCC
T ss_pred HHHHHHHHhhcccccccEEEEEcCCCcccccchhh-------------------------------------h----ccc
Confidence 99999999 66778999999999974320000000 0 000
Q ss_pred cccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhcCCcEEEcCCCCCccc
Q 015903 297 YLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDSNHELIELPMAGHHVQ 376 (398)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~i~~~gH~~~ 376 (398)
+... . ...+.+|.++|.+++|+++|.+.++++++.++++++.++++||+..
T Consensus 105 f~~~------------------p-----------~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 105 FTPL------------------P-----------RDPLPFPSIVIASDNDPYVPFERAQRLAQRLGAELIILGGGGHFNA 155 (171)
T ss_dssp CTTS------------------H-----------CCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT-EEEEETS-TTSSG
T ss_pred cccC------------------c-----------ccccCCCeEEEEcCCCCccCHHHHHHHHHHcCCCeEECCCCCCccc
Confidence 0000 0 0011678899999999999999999999999999999999999875
Q ss_pred cc
Q 015903 377 ED 378 (398)
Q Consensus 377 ~e 378 (398)
.+
T Consensus 156 ~~ 157 (171)
T PF06821_consen 156 AS 157 (171)
T ss_dssp GG
T ss_pred cc
Confidence 44
No 97
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.53 E-value=8.2e-14 Score=128.80 Aligned_cols=105 Identities=22% Similarity=0.269 Sum_probs=82.3
Q ss_pred CCCCEEEEecCCCCCc--cchhh-hhHhhh--c-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----
Q 015903 135 ADNHTVLLIHGFPSQA--YSYRK-VLPVLS--K-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI---- 204 (398)
Q Consensus 135 ~~~p~vvllHG~~~~~--~~~~~-~~~~L~--~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---- 204 (398)
.++|++|++||++.+. ..|.. +...|. . .++||++|++|+|.+..+... .....+++++.++++.+
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~----~~t~~vg~~la~lI~~L~~~~ 114 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA----AYTKLVGKDVAKFVNWMQEEF 114 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc----ccHHHHHHHHHHHHHHHHHhh
Confidence 3478999999998653 45754 555543 2 699999999999988655321 23466777777777765
Q ss_pred --CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCc
Q 015903 205 --ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLT 243 (398)
Q Consensus 205 --~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 243 (398)
+.++++|+||||||.+|..++...|++|.++++++|..+
T Consensus 115 gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 115 NYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 368999999999999999999999999999999998643
No 98
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.47 E-value=1.8e-13 Score=121.18 Aligned_cols=105 Identities=23% Similarity=0.276 Sum_probs=78.3
Q ss_pred CCCEEEEecCCCCCc-cchhh-hhH-hhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------C
Q 015903 136 DNHTVLLIHGFPSQA-YSYRK-VLP-VLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI------A 205 (398)
Q Consensus 136 ~~p~vvllHG~~~~~-~~~~~-~~~-~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l------~ 205 (398)
++|++|++||++++. ..|.. +.. .|.. +++|+++|+++++.+..+.. ..+...+.+++..+++.+ +
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a----~~~~~~v~~~la~~l~~L~~~~g~~ 110 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQA----VNNTRVVGAELAKFLDFLVDNTGLS 110 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHH----HHhHHHHHHHHHHHHHHHHHhcCCC
Confidence 478999999999887 56754 344 4444 89999999998743322111 234455556666666654 3
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcc
Q 015903 206 NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 244 (398)
.++++++||||||.+|..++.+.|++|.++++++|....
T Consensus 111 ~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 111 LENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred hHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 568999999999999999999999999999999986543
No 99
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.44 E-value=4e-12 Score=110.57 Aligned_cols=110 Identities=18% Similarity=0.276 Sum_probs=68.3
Q ss_pred EEEEEeccCCCCCEEEEecCCCCCcc---chhhhhHhhhc-CCeEEEEcCC----CCCCCCCCCCCCCCCCCHHHHHHHH
Q 015903 126 RWFCVESGNADNHTVLLIHGFPSQAY---SYRKVLPVLSK-NYHAIAFDWL----GFGFSEKPQPGYGFDYTLDEYVASL 197 (398)
Q Consensus 126 ~l~~~~~g~~~~p~vvllHG~~~~~~---~~~~~~~~L~~-g~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~~~~~dl 197 (398)
.+.|..........||||.|++.... ....+++.|.+ +|.|+.+.++ |+|.+ ++++-++||
T Consensus 22 afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~-----------SL~~D~~eI 90 (303)
T PF08538_consen 22 AFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS-----------SLDRDVEEI 90 (303)
T ss_dssp EEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-------------HHHHHHHH
T ss_pred EEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc-----------hhhhHHHHH
Confidence 44444444334558999999986444 34677888876 9999999876 44433 466666777
Q ss_pred HHHHHHh--------CCCcEEEEEeCcChHHHHHHHHhCC-----CccceEEEECCcCcccC
Q 015903 198 ESFVNEI--------ANDKVSLVVQGYFSPVVVKYASKHK-----DKLKDLILLNPPLTAKH 246 (398)
Q Consensus 198 ~~~l~~l--------~~~~v~lvG~S~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~ 246 (398)
.++++++ +.++|+|+|||-|+.-++.|+.... ..|+++||-+|+.+...
T Consensus 91 ~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 91 AQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp HHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTS
T ss_pred HHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhH
Confidence 6666654 3568999999999999999998752 57999999999887653
No 100
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.41 E-value=3e-12 Score=116.95 Aligned_cols=284 Identities=20% Similarity=0.229 Sum_probs=161.3
Q ss_pred Cccccccccccc-cCCeEEEEE--eccCCCCCEEEEecCCCCCccchhh------hhHhhhc-CCeEEEEcCCCCCCCCC
Q 015903 110 IFGLDLGSASQA-DEIFRWFCV--ESGNADNHTVLLIHGFPSQAYSYRK------VLPVLSK-NYHAIAFDWLGFGFSEK 179 (398)
Q Consensus 110 ~~G~~~~~~~~~-~~g~~l~~~--~~g~~~~p~vvllHG~~~~~~~~~~------~~~~L~~-g~~Vi~~D~rG~G~S~~ 179 (398)
..|.+++.+.++ .||+-+... +.+...+|+|++.||+-+++..|-. +.-.|++ ||+|+.-+.||--.|.+
T Consensus 43 ~~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~ 122 (403)
T KOG2624|consen 43 KYGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRK 122 (403)
T ss_pred HcCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchh
Confidence 456667767766 577654433 3343567999999999999998833 3345666 99999999999766543
Q ss_pred CC------CCCCCCCCHHHHHH-HHHHHHHHh----CCCcEEEEEeCcChHHHHHHHHhCCC---ccceEEEECCcCccc
Q 015903 180 PQ------PGYGFDYTLDEYVA-SLESFVNEI----ANDKVSLVVQGYFSPVVVKYASKHKD---KLKDLILLNPPLTAK 245 (398)
Q Consensus 180 ~~------~~~~~~~~~~~~~~-dl~~~l~~l----~~~~v~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~ 245 (398)
.. ...-+.+++++++. ||-+.++.+ +.++++.+|||.|+......+...|+ +|+.+++++|.....
T Consensus 123 h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 123 HKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK 202 (403)
T ss_pred hcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc
Confidence 11 11234567777553 666666654 66899999999999999998888876 799999999987444
Q ss_pred CCCCchh--HHHh--HHhhhhhhccCCccchhhh----hhh-ccCCCC---------------CChhhhhhhh-cccccC
Q 015903 246 HANLPST--LSIF--SNFLLGEIFSQDPLRASDK----ALT-SCGPYQ---------------MKEDDAMVYR-SPYLSS 300 (398)
Q Consensus 246 ~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~---------------~~~~~~~~~~-~~~~~~ 300 (398)
....+.. ...+ ...++...+....+..... +.. .+.... .......... ..+...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h 282 (403)
T KOG2624|consen 203 HIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAH 282 (403)
T ss_pred ccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhcc
Confidence 1111110 0000 0001111111111111000 000 000000 0000000000 000111
Q ss_pred CCchhHHHHH---HHh------------hhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-CCc
Q 015903 301 GSSGFALTAI---SKG------------MKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHE 364 (398)
Q Consensus 301 ~~~~~~~~~~---~~~------------~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~ 364 (398)
...+...+.+ ... ...+...+-....+.+...++++||.+.+|++|.++.++..+.+.... ++.
T Consensus 283 ~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~ 362 (403)
T KOG2624|consen 283 LPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSV 362 (403)
T ss_pred CCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhccccc
Confidence 1111110000 000 001112222222344556788999999999999999999999877777 333
Q ss_pred EEE---cCCCCCccc---ccChHHHHHHHHHHHhh
Q 015903 365 LIE---LPMAGHHVQ---EDSGEELGKVISEIFRK 393 (398)
Q Consensus 365 ~~~---i~~~gH~~~---~e~p~~~~~~i~~fl~~ 393 (398)
... +++-.|.-+ .+.++++.+.|.+.++.
T Consensus 363 ~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~ 397 (403)
T KOG2624|consen 363 IKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRL 397 (403)
T ss_pred ccccccCCCccceeeeeccCcHHHHHHHHHHHHHh
Confidence 322 788888643 45789999999988874
No 101
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.41 E-value=8.1e-12 Score=102.97 Aligned_cols=179 Identities=18% Similarity=0.201 Sum_probs=112.1
Q ss_pred EEEecCCCCCccchhh--hhHhhhc---CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEe
Q 015903 140 VLLIHGFPSQAYSYRK--VLPVLSK---NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQ 214 (398)
Q Consensus 140 vvllHG~~~~~~~~~~--~~~~L~~---g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~ 214 (398)
|+++||+.++....+. +.+.+.+ ...+..+|++ ...++..+.+.++++....+.+.|+|.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~---------------~~p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP---------------PFPEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC---------------cCHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 7999999988887643 3455655 4566666665 346777888999999988778999999
Q ss_pred CcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhhhh
Q 015903 215 GYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMVYR 294 (398)
Q Consensus 215 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (398)
||||+.|..+|.+++ +++ |+++|...+.. .+...+....... ..
T Consensus 67 SlGG~~A~~La~~~~--~~a-vLiNPav~p~~-------------~l~~~iG~~~~~~--------------------~~ 110 (187)
T PF05728_consen 67 SLGGFYATYLAERYG--LPA-VLINPAVRPYE-------------LLQDYIGEQTNPY--------------------TG 110 (187)
T ss_pred ChHHHHHHHHHHHhC--CCE-EEEcCCCCHHH-------------HHHHhhCccccCC--------------------CC
Confidence 999999999999885 444 88999765430 0001111000000 00
Q ss_pred cccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhc-cCCCCCCEEEEeeCCCCccCchhHHHHHHhcCCcEEEcCCCCC
Q 015903 295 SPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILM-DKSWKIPTTVCWGQRDRWLNNDGVEDFCNDSNHELIELPMAGH 373 (398)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~i~~~gH 373 (398)
+.+. +. .....+++.+.. ...-..++++++++.|++++.+.+....+ ++..++.+|++|
T Consensus 111 e~~~-----------~~-------~~~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~~~~~--~~~~~i~~ggdH 170 (187)
T PF05728_consen 111 ESYE-----------LT-------EEHIEELKALEVPYPTNPERYLVLLQTGDEVLDYREAVAKYR--GCAQIIEEGGDH 170 (187)
T ss_pred ccce-----------ec-------hHhhhhcceEeccccCCCccEEEEEecCCcccCHHHHHHHhc--CceEEEEeCCCC
Confidence 0000 00 000011111000 01226799999999999999865544444 456667788899
Q ss_pred cccccChHHHHHHHHHHH
Q 015903 374 HVQEDSGEELGKVISEIF 391 (398)
Q Consensus 374 ~~~~e~p~~~~~~i~~fl 391 (398)
-+. +-++....|.+|+
T Consensus 171 ~f~--~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 171 SFQ--DFEEYLPQIIAFL 186 (187)
T ss_pred CCc--cHHHHHHHHHHhh
Confidence 763 5667778888886
No 102
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.39 E-value=1e-11 Score=101.58 Aligned_cols=220 Identities=17% Similarity=0.264 Sum_probs=125.4
Q ss_pred EEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHHhC----CCcEEEE
Q 015903 139 TVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVA-SLESFVNEIA----NDKVSLV 212 (398)
Q Consensus 139 ~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~-dl~~~l~~l~----~~~v~lv 212 (398)
.|++-.+.+.....|+.++..+++ ||.|+++|+||.|.|...... +..+.+.|++. |+.+.++.++ .-+...|
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~-~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~v 110 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLS-GSQWRYLDWARLDFPAALAALKKALPGHPLYFV 110 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccc-cCccchhhhhhcchHHHHHHHHhhCCCCceEEe
Confidence 455555566666677999999988 999999999999999876542 33566777764 6777666654 3478999
Q ss_pred EeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHH---hhhhhhccCCccchhh----hhhhccCCCCC
Q 015903 213 VQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSN---FLLGEIFSQDPLRASD----KALTSCGPYQM 285 (398)
Q Consensus 213 G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 285 (398)
|||+||.+.-.+. +++ ++.+....+...... .++..... ..+..+.. .+..... +.+...+.
T Consensus 111 gHS~GGqa~gL~~-~~~-k~~a~~vfG~gagws-----g~m~~~~~l~~~~l~~lv~-p~lt~w~g~~p~~l~G~G~--- 179 (281)
T COG4757 111 GHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWS-----GWMGLRERLGAVLLWNLVG-PPLTFWKGYMPKDLLGLGS--- 179 (281)
T ss_pred eccccceeecccc-cCc-ccceeeEeccccccc-----cchhhhhcccceeeccccc-cchhhccccCcHhhcCCCc---
Confidence 9999997655443 455 455544444432211 11111000 00000000 0000000 00000000
Q ss_pred ChhhhhhhhcccccCCCchhHHHHHHHhhhhh--------HHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHH
Q 015903 286 KEDDAMVYRSPYLSSGSSGFALTAISKGMKKQ--------LKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDF 357 (398)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l 357 (398)
..+...++.+.+..... ...+.+.+ ..+++|++++...+|+.+|+...+.+
T Consensus 180 ---------------d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~y------aaVrtPi~~~~~~DD~w~P~As~d~f 238 (281)
T COG4757 180 ---------------DLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVY------AAVRTPITFSRALDDPWAPPASRDAF 238 (281)
T ss_pred ---------------cCcchHHHHHHHHhcCccccccChhHhHHHHHH------HHhcCceeeeccCCCCcCCHHHHHHH
Confidence 01111111111111111 01111111 24499999999999999999999999
Q ss_pred HHhc---CCcEEEcCCC----CCcccccCh-HHHHHHHHHHH
Q 015903 358 CNDS---NHELIELPMA----GHHVQEDSG-EELGKVISEIF 391 (398)
Q Consensus 358 ~~~~---~~~~~~i~~~----gH~~~~e~p-~~~~~~i~~fl 391 (398)
.... ..+...++.+ ||+-...++ |.+.+.+.+|+
T Consensus 239 ~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 239 ASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 8877 4455555544 999877776 78888887775
No 103
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.39 E-value=1.4e-12 Score=91.47 Aligned_cols=76 Identities=25% Similarity=0.446 Sum_probs=64.8
Q ss_pred CeEEEEEeccCCC--CCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 015903 124 IFRWFCVESGNAD--NHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESF 200 (398)
Q Consensus 124 g~~l~~~~~g~~~--~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~ 200 (398)
|.++++..+.+++ +.+|+++||++.++..|..+++.|++ ||.|+++|+||||+|..... ...+++++++|+..+
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg---~~~~~~~~v~D~~~~ 77 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRG---HIDSFDDYVDDLHQF 77 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCccc---ccCCHHHHHHHHHHH
Confidence 4578888876543 56899999999999999999999999 99999999999999986443 356899999999988
Q ss_pred HH
Q 015903 201 VN 202 (398)
Q Consensus 201 l~ 202 (398)
++
T Consensus 78 ~~ 79 (79)
T PF12146_consen 78 IQ 79 (79)
T ss_pred hC
Confidence 64
No 104
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.39 E-value=6.5e-11 Score=97.84 Aligned_cols=220 Identities=19% Similarity=0.290 Sum_probs=116.1
Q ss_pred CCeEEEEEeccCC-----CCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCC-CCCCCCCCCCCCCCCHHHHHH
Q 015903 123 EIFRWFCVESGNA-----DNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGF-GFSEKPQPGYGFDYTLDEYVA 195 (398)
Q Consensus 123 ~g~~l~~~~~g~~-----~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~-G~S~~~~~~~~~~~~~~~~~~ 195 (398)
+|..++.++..+. +.++||+.+|++.....|..++.+|+. ||+|+.||.-.| |.|++... ++++....+
T Consensus 11 ~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~----eftms~g~~ 86 (294)
T PF02273_consen 11 DGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDIN----EFTMSIGKA 86 (294)
T ss_dssp TTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-----------------HHHHHH
T ss_pred CCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChh----hcchHHhHH
Confidence 6667776655432 358999999999999999999999998 999999999877 88887764 689999999
Q ss_pred HHHHHHHHh---CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccch
Q 015903 196 SLESFVNEI---ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRA 272 (398)
Q Consensus 196 dl~~~l~~l---~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (398)
++..+++++ +..++.|+.-|+.|-+|+..|.+- .+.-+|...+..+.. ..+...+...++. .+...
T Consensus 87 sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr--------~TLe~al~~Dyl~-~~i~~ 155 (294)
T PF02273_consen 87 SLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLR--------DTLEKALGYDYLQ-LPIEQ 155 (294)
T ss_dssp HHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HH--------HHHHHHHSS-GGG-S-GGG
T ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHH--------HHHHHHhccchhh-cchhh
Confidence 999988887 677899999999999999999853 488888877765432 1111111111110 11110
Q ss_pred hhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCch
Q 015903 273 SDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNND 352 (398)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~ 352 (398)
+.... .+. -..-+...|..+.+...+ .++.....++ +++.+|++.+++++|.+|...
T Consensus 156 lp~dl--------------dfe--Gh~l~~~vFv~dc~e~~w-~~l~ST~~~~------k~l~iP~iaF~A~~D~WV~q~ 212 (294)
T PF02273_consen 156 LPEDL--------------DFE--GHNLGAEVFVTDCFEHGW-DDLDSTINDM------KRLSIPFIAFTANDDDWVKQS 212 (294)
T ss_dssp --SEE--------------EET--TEEEEHHHHHHHHHHTT--SSHHHHHHHH------TT--S-EEEEEETT-TTS-HH
T ss_pred CCCcc--------------ccc--ccccchHHHHHHHHHcCC-ccchhHHHHH------hhCCCCEEEEEeCCCccccHH
Confidence 00000 000 000011112111122111 2233333444 455999999999999999999
Q ss_pred hHHHHHHhc---CCcEEEcCCCCCcccccChH
Q 015903 353 GVEDFCNDS---NHELIELPMAGHHVQEDSGE 381 (398)
Q Consensus 353 ~~~~l~~~~---~~~~~~i~~~gH~~~~e~p~ 381 (398)
...++...+ .+++..++|++|.+- |++.
T Consensus 213 eV~~~~~~~~s~~~klysl~Gs~HdL~-enl~ 243 (294)
T PF02273_consen 213 EVEELLDNINSNKCKLYSLPGSSHDLG-ENLV 243 (294)
T ss_dssp HHHHHHTT-TT--EEEEEETT-SS-TT-SSHH
T ss_pred HHHHHHHhcCCCceeEEEecCccchhh-hChH
Confidence 999999877 778899999999764 5553
No 105
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.36 E-value=9.7e-12 Score=123.98 Aligned_cols=222 Identities=12% Similarity=0.084 Sum_probs=144.0
Q ss_pred ccccccCCeEEEEEeccCC------CCCEEEEecCCCCCccc---h-hhhhH-hhhc-CCeEEEEcCCCCCCCCCCC---
Q 015903 117 SASQADEIFRWFCVESGNA------DNHTVLLIHGFPSQAYS---Y-RKVLP-VLSK-NYHAIAFDWLGFGFSEKPQ--- 181 (398)
Q Consensus 117 ~~~~~~~g~~l~~~~~g~~------~~p~vvllHG~~~~~~~---~-~~~~~-~L~~-g~~Vi~~D~rG~G~S~~~~--- 181 (398)
...+..+|+...+...-++ +-|.+|.+||++++... | ..+.. .... |+.|+.+|.||.|......
T Consensus 500 ~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~ 579 (755)
T KOG2100|consen 500 FGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSA 579 (755)
T ss_pred eEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHH
Confidence 3344458888877765432 24889999999973321 1 11122 3333 9999999999998775542
Q ss_pred --CCCCCCCCHHHHHHHHHHHHHHh--CCCcEEEEEeCcChHHHHHHHHhCC-CccceEEEECCcCcccCCCCchhHHHh
Q 015903 182 --PGYGFDYTLDEYVASLESFVNEI--ANDKVSLVVQGYFSPVVVKYASKHK-DKLKDLILLNPPLTAKHANLPSTLSIF 256 (398)
Q Consensus 182 --~~~~~~~~~~~~~~dl~~~l~~l--~~~~v~lvG~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~ 256 (398)
...| ....+|+...+..+++.. +.+++.|+|+|+||++++..+...| +.++|.+.++|+.+.......
T Consensus 580 ~~~~lG-~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~------ 652 (755)
T KOG2100|consen 580 LPRNLG-DVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDST------ 652 (755)
T ss_pred hhhhcC-CcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeeccc------
Confidence 1122 345677777777777654 5568999999999999999999998 567888999997754310000
Q ss_pred HHhhhhhhccCCccchhhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCC
Q 015903 257 SNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKI 336 (398)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 336 (398)
...+.+ ..+.+.... ..+.........++.
T Consensus 653 --------~terym-------------g~p~~~~~~-----------------------------y~e~~~~~~~~~~~~ 682 (755)
T KOG2100|consen 653 --------YTERYM-------------GLPSENDKG-----------------------------YEESSVSSPANNIKT 682 (755)
T ss_pred --------ccHhhc-------------CCCccccch-----------------------------hhhccccchhhhhcc
Confidence 000000 000000000 111111111233455
Q ss_pred CE-EEEeeCCCCccCchhHHHHHHhc-----CCcEEEcCCCCCcccc-cChHHHHHHHHHHHhhcc
Q 015903 337 PT-TVCWGQRDRWLNNDGVEDFCNDS-----NHELIELPMAGHHVQE-DSGEELGKVISEIFRKRR 395 (398)
Q Consensus 337 Pv-lii~G~~D~~v~~~~~~~l~~~~-----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 395 (398)
|. |+|||+.|..++.+++..+.+++ ..++.++|+..|.+.. +.-..+...+..|+..+.
T Consensus 683 ~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 683 PKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCF 748 (755)
T ss_pred CCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHc
Confidence 65 99999999999999999999888 6789999999998864 344778888999988543
No 106
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.35 E-value=3.8e-11 Score=105.74 Aligned_cols=109 Identities=18% Similarity=0.287 Sum_probs=89.0
Q ss_pred CCEEEEecCCCCCccchhhhhHhhh----cCCeEEEEcCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHhC-----
Q 015903 137 NHTVLLIHGFPSQAYSYRKVLPVLS----KNYHAIAFDWLGFGFSEKPQP--GYGFDYTLDEYVASLESFVNEIA----- 205 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~~~L~----~g~~Vi~~D~rG~G~S~~~~~--~~~~~~~~~~~~~dl~~~l~~l~----- 205 (398)
++.||+++|.+|-.+.|..++..|. ..+.|+++.+.||-.+..... ..+..+++++.++...++++++-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 4589999999999999988887776 389999999999977765511 11346899999998888887652
Q ss_pred -CCcEEEEEeCcChHHHHHHHHhCC---CccceEEEECCcCccc
Q 015903 206 -NDKVSLVVQGYFSPVVVKYASKHK---DKLKDLILLNPPLTAK 245 (398)
Q Consensus 206 -~~~v~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~ 245 (398)
..+++|+|||.|+++++++..+.+ .+|.+++++-|.....
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccc
Confidence 347999999999999999999999 6899999998876543
No 107
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.34 E-value=1.3e-10 Score=89.52 Aligned_cols=177 Identities=22% Similarity=0.312 Sum_probs=121.9
Q ss_pred EEEEecCCCCCcc--chhhhhHhhhc-CCeEEEEcCCCC-----CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEE
Q 015903 139 TVLLIHGFPSQAY--SYRKVLPVLSK-NYHAIAFDWLGF-----GFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVS 210 (398)
Q Consensus 139 ~vvllHG~~~~~~--~~~~~~~~L~~-g~~Vi~~D~rG~-----G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~ 210 (398)
+||+-||.|.+.+ .....+..|+. |+.|..|+++-. |+.. +++. ...-..++...+.++...+...+.+
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rk-Pp~~--~~t~~~~~~~~~aql~~~l~~gpLi 92 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRK-PPPG--SGTLNPEYIVAIAQLRAGLAEGPLI 92 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCC-CcCc--cccCCHHHHHHHHHHHhcccCCcee
Confidence 7899999987655 46777888888 999999998854 3221 2221 1233467777788888887777999
Q ss_pred EEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhh
Q 015903 211 LVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDA 290 (398)
Q Consensus 211 lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (398)
+-|+||||-++.+++..-.-.|+++++++-++.+... |...
T Consensus 93 ~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGK--Pe~~------------------------------------- 133 (213)
T COG3571 93 IGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGK--PEQL------------------------------------- 133 (213)
T ss_pred eccccccchHHHHHHHhhcCCcceEEEecCccCCCCC--cccc-------------------------------------
Confidence 9999999999999998766669999999865544310 0000
Q ss_pred hhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhcCCcEEEcCC
Q 015903 291 MVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDSNHELIELPM 370 (398)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~i~~ 370 (398)
+ ...+..+++|+||.+|+.|++-..+....+.-.-..+++++++
T Consensus 134 ---R---------------------------------t~HL~gl~tPtli~qGtrD~fGtr~~Va~y~ls~~iev~wl~~ 177 (213)
T COG3571 134 ---R---------------------------------TEHLTGLKTPTLITQGTRDEFGTRDEVAGYALSDPIEVVWLED 177 (213)
T ss_pred ---h---------------------------------hhhccCCCCCeEEeecccccccCHHHHHhhhcCCceEEEEecc
Confidence 0 0011345999999999999987766653222211789999999
Q ss_pred CCCcccc----------cChHHHHHHHHHHHhh
Q 015903 371 AGHHVQE----------DSGEELGKVISEIFRK 393 (398)
Q Consensus 371 ~gH~~~~----------e~p~~~~~~i~~fl~~ 393 (398)
+.|.+-- ++-...++.|..|+..
T Consensus 178 adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 178 ADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred CccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 9997521 2334556677777654
No 108
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.34 E-value=3.3e-12 Score=109.46 Aligned_cols=98 Identities=19% Similarity=0.237 Sum_probs=62.1
Q ss_pred EEEecCCCC---CccchhhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----hCCCcE
Q 015903 140 VLLIHGFPS---QAYSYRKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNE-----IANDKV 209 (398)
Q Consensus 140 vvllHG~~~---~~~~~~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-----l~~~~v 209 (398)
||++||++. +......+...+++ |+.|+.+|+|=..... +...++|..+.+..+++. .+.+++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~-------~p~~~~D~~~a~~~l~~~~~~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAP-------FPAALEDVKAAYRWLLKNADKLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSS-------TTHHHHHHHHHHHHHHHTHHHHTEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccc-------ccccccccccceeeeccccccccccccce
Confidence 799999973 33444555555553 9999999999432211 112244444444444444 345689
Q ss_pred EEEEeCcChHHHHHHHHhCCC----ccceEEEECCcCcc
Q 015903 210 SLVVQGYFSPVVVKYASKHKD----KLKDLILLNPPLTA 244 (398)
Q Consensus 210 ~lvG~S~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~ 244 (398)
+|+|+|.||.+++.++....+ .+++++++.|..+.
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 999999999999999976433 48999999996644
No 109
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.32 E-value=6e-11 Score=118.77 Aligned_cols=218 Identities=11% Similarity=0.074 Sum_probs=119.8
Q ss_pred hHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--------------------CCcEEEEEeC
Q 015903 157 LPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIA--------------------NDKVSLVVQG 215 (398)
Q Consensus 157 ~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~--------------------~~~v~lvG~S 215 (398)
.+.+.+ ||.|+.+|.||+|.|++.... . ..+-.+|..++|+++. ..+|.++|.|
T Consensus 272 ~~~~~~rGYaVV~~D~RGtg~SeG~~~~----~-~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~S 346 (767)
T PRK05371 272 NDYFLPRGFAVVYVSGIGTRGSDGCPTT----G-DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKS 346 (767)
T ss_pred HHHHHhCCeEEEEEcCCCCCCCCCcCcc----C-CHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEc
Confidence 355555 999999999999999886532 2 2445677777777764 4689999999
Q ss_pred cChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhhhhc
Q 015903 216 YFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMVYRS 295 (398)
Q Consensus 216 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (398)
|||.+++.+|...|+.++++|..++...... .............+.......+...... .............
T Consensus 347 Y~G~~~~~aAa~~pp~LkAIVp~a~is~~yd-----~yr~~G~~~~~~g~~ged~d~l~~~~~~---r~~~~~~~~~~~~ 418 (767)
T PRK05371 347 YLGTLPNAVATTGVEGLETIIPEAAISSWYD-----YYRENGLVRAPGGYQGEDLDVLAELTYS---RNLLAGDYLRHNE 418 (767)
T ss_pred HHHHHHHHHHhhCCCcceEEEeeCCCCcHHH-----HhhcCCceeccCCcCCcchhhHHHHhhh---cccCcchhhcchH
Confidence 9999999999999999999999887543210 0000000000000000000000000000 0000000000000
Q ss_pred ccccCCCchhHHHHHHHhhh---hhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhc-----CCcEEE
Q 015903 296 PYLSSGSSGFALTAISKGMK---KQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-----NHELIE 367 (398)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-----~~~~~~ 367 (398)
.+ ......+...+. .+...+...........+|++|+|+|+|..|..++++.+.++.+.+ +.++.+
T Consensus 419 ~~------~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l 492 (767)
T PRK05371 419 AC------EKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFL 492 (767)
T ss_pred HH------HHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEE
Confidence 00 000000000000 0111222222223344678999999999999999988887777766 455655
Q ss_pred cCCCCCccc-ccChHHHHHHHHHHHhhc
Q 015903 368 LPMAGHHVQ-EDSGEELGKVISEIFRKR 394 (398)
Q Consensus 368 i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 394 (398)
.+ .+|... ...+.++.+.+.+|++..
T Consensus 493 ~~-g~H~~~~~~~~~d~~e~~~~Wfd~~ 519 (767)
T PRK05371 493 HQ-GGHVYPNNWQSIDFRDTMNAWFTHK 519 (767)
T ss_pred eC-CCccCCCchhHHHHHHHHHHHHHhc
Confidence 55 589653 335567778888888653
No 110
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.30 E-value=1.2e-11 Score=121.49 Aligned_cols=107 Identities=14% Similarity=0.072 Sum_probs=83.6
Q ss_pred ccCCeEEEEEeccCC---------CCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCC---------
Q 015903 121 ADEIFRWFCVESGNA---------DNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQ--------- 181 (398)
Q Consensus 121 ~~~g~~l~~~~~g~~---------~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~--------- 181 (398)
.+++.++.|...|.+ ..|+||++||++++...|..+++.|.+ ||+|+++|+||||.|....
T Consensus 424 ~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~ 503 (792)
T TIGR03502 424 TPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATN 503 (792)
T ss_pred ecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccc
Confidence 356666666554332 136899999999999999999999986 9999999999999994431
Q ss_pred -CCCCC---------CCCHHHHHHHHHHHHHHhC----------------CCcEEEEEeCcChHHHHHHHHh
Q 015903 182 -PGYGF---------DYTLDEYVASLESFVNEIA----------------NDKVSLVVQGYFSPVVVKYASK 227 (398)
Q Consensus 182 -~~~~~---------~~~~~~~~~dl~~~l~~l~----------------~~~v~lvG~S~Gg~ia~~~a~~ 227 (398)
...++ ..++.+.+.|+..++..++ ..+++++||||||.++..++..
T Consensus 504 ~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 504 ANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11111 1368999999999888876 2489999999999999999975
No 111
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.29 E-value=1.7e-10 Score=90.94 Aligned_cols=171 Identities=20% Similarity=0.330 Sum_probs=116.4
Q ss_pred CEEEEecCCCCCc-cchhhhh-HhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeC
Q 015903 138 HTVLLIHGFPSQA-YSYRKVL-PVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQG 215 (398)
Q Consensus 138 p~vvllHG~~~~~-~~~~~~~-~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S 215 (398)
+.+|++||+.++. ..|.... ..|. + +-.+++. +.. ....++|++.+...+... .++++||+||
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~-~--a~rveq~-----~w~------~P~~~dWi~~l~~~v~a~-~~~~vlVAHS 67 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP-N--ARRVEQD-----DWE------APVLDDWIARLEKEVNAA-EGPVVLVAHS 67 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc-c--chhcccC-----CCC------CCCHHHHHHHHHHHHhcc-CCCeEEEEec
Confidence 5799999997655 4565433 2332 1 2222221 111 346889988888888877 4669999999
Q ss_pred cChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhhhhc
Q 015903 216 YFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMVYRS 295 (398)
Q Consensus 216 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (398)
+|+..++.++......|.|+++++|+-.......+... ..+.
T Consensus 68 LGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~-------------------------------------~tf~- 109 (181)
T COG3545 68 LGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHL-------------------------------------MTFD- 109 (181)
T ss_pred ccHHHHHHHHHhhhhccceEEEecCCCccccccchhhc-------------------------------------cccC-
Confidence 99999999999887799999999996432210000000 0000
Q ss_pred ccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhcCCcEEEcCCCCCcc
Q 015903 296 PYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDSNHELIELPMAGHHV 375 (398)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~i~~~gH~~ 375 (398)
.+ ...+..-|.+++.+++|++++++.++.+++..+..++.+..+||+-
T Consensus 110 ~~--------------------------------p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~lv~~g~~GHiN 157 (181)
T COG3545 110 PI--------------------------------PREPLPFPSVVVASRNDPYVSYEHAEDLANAWGSALVDVGEGGHIN 157 (181)
T ss_pred CC--------------------------------ccccCCCceeEEEecCCCCCCHHHHHHHHHhccHhheecccccccc
Confidence 00 0012367999999999999999999999999999999999999964
Q ss_pred c---ccChHHHHHHHHHHHhh
Q 015903 376 Q---EDSGEELGKVISEIFRK 393 (398)
Q Consensus 376 ~---~e~p~~~~~~i~~fl~~ 393 (398)
- ...-.+....+.+|+.+
T Consensus 158 ~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 158 AESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred hhhcCCCcHHHHHHHHHHhhh
Confidence 3 23445667777777654
No 112
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.29 E-value=8.2e-11 Score=100.58 Aligned_cols=110 Identities=21% Similarity=0.234 Sum_probs=77.5
Q ss_pred EEeccCCCCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-h--
Q 015903 129 CVESGNADNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNE-I-- 204 (398)
Q Consensus 129 ~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-l-- 204 (398)
|.+...+.-|+|||+||+......|..++++++. ||-|+++|+...+......+ ..+..++++++.+-++. +
T Consensus 9 ~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~----~~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 9 YYPSSAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDE----VASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred EecCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchh----HHHHHHHHHHHHhcchhhccc
Confidence 3344455579999999999777778999999999 99999999766443211111 11223333332221111 1
Q ss_pred ----CCCcEEEEEeCcChHHHHHHHHhC-----CCccceEEEECCcC
Q 015903 205 ----ANDKVSLVVQGYFSPVVVKYASKH-----KDKLKDLILLNPPL 242 (398)
Q Consensus 205 ----~~~~v~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~ 242 (398)
+..++.|.|||-||-++..++..+ +.+++++|+++|.-
T Consensus 85 ~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 85 GVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 345899999999999999999887 55899999999965
No 113
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.26 E-value=2.1e-10 Score=124.21 Aligned_cols=99 Identities=13% Similarity=0.059 Sum_probs=87.0
Q ss_pred CCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CcEEEEEeC
Q 015903 137 NHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIAN-DKVSLVVQG 215 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-~~v~lvG~S 215 (398)
+++++++||++++...|..+.+.|..++.|+.++.+|+|.+... .++++++++++.+.++.+.. .+++++|||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~~------~~~l~~la~~~~~~i~~~~~~~p~~l~G~S 1141 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQT------ATSLDEVCEAHLATLLEQQPHGPYHLLGYS 1141 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCCC------CCCHHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 57899999999999999999999988999999999999865321 47899999999999988764 489999999
Q ss_pred cChHHHHHHHHh---CCCccceEEEECCc
Q 015903 216 YFSPVVVKYASK---HKDKLKDLILLNPP 241 (398)
Q Consensus 216 ~Gg~ia~~~a~~---~p~~v~~lvl~~~~ 241 (398)
|||.++..+|.+ .++++..++++++.
T Consensus 1142 ~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred hhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 999999999986 57889999999874
No 114
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.23 E-value=1.5e-10 Score=107.67 Aligned_cols=201 Identities=15% Similarity=0.157 Sum_probs=136.7
Q ss_pred CCEEEEecCCCC-----Cccchhhhh--Hhhhc-CCeEEEEcCCCCCCCCCCCCC-----CCCCCCHHHHHHHHHHHHHH
Q 015903 137 NHTVLLIHGFPS-----QAYSYRKVL--PVLSK-NYHAIAFDWLGFGFSEKPQPG-----YGFDYTLDEYVASLESFVNE 203 (398)
Q Consensus 137 ~p~vvllHG~~~-----~~~~~~~~~--~~L~~-g~~Vi~~D~rG~G~S~~~~~~-----~~~~~~~~~~~~dl~~~l~~ 203 (398)
-|+++++-|+++ +...|...+ ..|+. ||-|+.+|-||........+. .| ...++|.++-+.-+.++
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmG-qVE~eDQVeglq~Laeq 720 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMG-QVEVEDQVEGLQMLAEQ 720 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccC-eeeehhhHHHHHHHHHh
Confidence 589999999985 333332222 45666 999999999998665543321 22 34578888888888887
Q ss_pred h---CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhcc
Q 015903 204 I---ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSC 280 (398)
Q Consensus 204 l---~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (398)
. +.++|.+.|||+||+++++...++|+-++++|.-+|+.....-+.
T Consensus 721 ~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDT------------------------------- 769 (867)
T KOG2281|consen 721 TGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDT------------------------------- 769 (867)
T ss_pred cCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecc-------------------------------
Confidence 6 467999999999999999999999999999888777654321000
Q ss_pred CCCCCChhhhhhhhcccccCC---CchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHH
Q 015903 281 GPYQMKEDDAMVYRSPYLSSG---SSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDF 357 (398)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l 357 (398)
.|.+.|+... ..++.. .........+.. =.-..|++||--|.-|...+...+
T Consensus 770 -----------gYTERYMg~P~~nE~gY~a--------gSV~~~Veklpd------epnRLlLvHGliDENVHF~Hts~L 824 (867)
T KOG2281|consen 770 -----------GYTERYMGYPDNNEHGYGA--------GSVAGHVEKLPD------EPNRLLLVHGLIDENVHFAHTSRL 824 (867)
T ss_pred -----------cchhhhcCCCccchhcccc--------hhHHHHHhhCCC------CCceEEEEecccccchhhhhHHHH
Confidence 0011111100 000000 011111222211 145589999999999999888877
Q ss_pred HHhc-----CCcEEEcCCCCCcc-cccChHHHHHHHHHHHhhc
Q 015903 358 CNDS-----NHELIELPMAGHHV-QEDSGEELGKVISEIFRKR 394 (398)
Q Consensus 358 ~~~~-----~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 394 (398)
...+ ..++++||+.-|.+ ..|...-+...|..||+++
T Consensus 825 vs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~~ 867 (867)
T KOG2281|consen 825 VSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQEN 867 (867)
T ss_pred HHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhhC
Confidence 7777 67899999999998 5677778888999999863
No 115
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.22 E-value=2.9e-10 Score=101.24 Aligned_cols=107 Identities=16% Similarity=0.041 Sum_probs=75.1
Q ss_pred CCCCCEEEEecCCCCCc-cch--hhhhH-------hhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 015903 134 NADNHTVLLIHGFPSQA-YSY--RKVLP-------VLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVN 202 (398)
Q Consensus 134 ~~~~p~vvllHG~~~~~-~~~--~~~~~-------~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~ 202 (398)
....|+||..|+++.+. ... ..... .+.+ ||.|+..|.||.|.|...... ....-.+|..++|+
T Consensus 17 ~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~-----~~~~e~~D~~d~I~ 91 (272)
T PF02129_consen 17 GGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP-----MSPNEAQDGYDTIE 91 (272)
T ss_dssp SSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T-----TSHHHHHHHHHHHH
T ss_pred CCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc-----CChhHHHHHHHHHH
Confidence 33458999999998653 111 11111 1444 999999999999999987643 14566778888888
Q ss_pred HhC-----CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCccc
Q 015903 203 EIA-----NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAK 245 (398)
Q Consensus 203 ~l~-----~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 245 (398)
.+. ..+|.++|.|++|..++..|...|..+++++...+..+..
T Consensus 92 W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 92 WIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp HHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTC
T ss_pred HHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCccc
Confidence 763 2489999999999999999998889999999998866554
No 116
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.22 E-value=4.9e-10 Score=94.66 Aligned_cols=106 Identities=9% Similarity=0.015 Sum_probs=70.0
Q ss_pred CCEEEEecCCCCCccchhhh--hHhhhc--CCeEEEEcCCCCCCCCC------CCCCCCCCCCHHHHHHHHHHHHHHh--
Q 015903 137 NHTVLLIHGFPSQAYSYRKV--LPVLSK--NYHAIAFDWLGFGFSEK------PQPGYGFDYTLDEYVASLESFVNEI-- 204 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~--~~~L~~--g~~Vi~~D~rG~G~S~~------~~~~~~~~~~~~~~~~dl~~~l~~l-- 204 (398)
.|+||++||.+.+...|... ...|++ ||-|+.++......... .....+ .-+...+...+.++....
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g-~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRG-GGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccC-ccchhhHHHHHHhHhhhccc
Confidence 58999999999998877442 345666 88999888542111100 000000 111222333344444444
Q ss_pred CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCc
Q 015903 205 ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLT 243 (398)
Q Consensus 205 ~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 243 (398)
+.++|++.|+|.||+++..++..+|+.|.++..+++...
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 456899999999999999999999999999988887543
No 117
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.18 E-value=2.9e-09 Score=95.56 Aligned_cols=219 Identities=16% Similarity=0.093 Sum_probs=125.5
Q ss_pred CCCEEEEecCCCC-----CccchhhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----
Q 015903 136 DNHTVLLIHGFPS-----QAYSYRKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNE----- 203 (398)
Q Consensus 136 ~~p~vvllHG~~~-----~~~~~~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~----- 203 (398)
..|.||++||+|. ....|..+...+++ +.-|+.+|+|=--+...+ -.++|-.+.+..+.+.
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P-------a~y~D~~~Al~w~~~~~~~~~ 161 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP-------AAYDDGWAALKWVLKNSWLKL 161 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC-------ccchHHHHHHHHHHHhHHHHh
Confidence 4689999999973 24567888888766 999999999944333332 2356666666666553
Q ss_pred -hCCCcEEEEEeCcChHHHHHHHHhC------CCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhh
Q 015903 204 -IANDKVSLVVQGYFSPVVVKYASKH------KDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKA 276 (398)
Q Consensus 204 -l~~~~v~lvG~S~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (398)
.+.++++|+|-|.||.+|..+|.+. +-++++.|++-|.+.......++........ ..........+
T Consensus 162 ~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~------~~~~~~~~~~~ 235 (336)
T KOG1515|consen 162 GADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGS------PELARPKIDKW 235 (336)
T ss_pred CCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCC------cchhHHHHHHH
Confidence 2567899999999999999988763 3479999999998776543333222111000 00000011111
Q ss_pred hhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCC-CEEEEeeCCCCccCch--h
Q 015903 277 LTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKI-PTTVCWGQRDRWLNND--G 353 (398)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-Pvlii~G~~D~~v~~~--~ 353 (398)
+....+.... ....++...... . ......-..+ |+|++.++.|.+.... .
T Consensus 236 w~~~lP~~~~-----~~~~p~~np~~~------------------~----~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y 288 (336)
T KOG1515|consen 236 WRLLLPNGKT-----DLDHPFINPVGN------------------S----LAKDLSGLGLPPTLVVVAGYDVLRDEGLAY 288 (336)
T ss_pred HHHhCCCCCC-----CcCCcccccccc------------------c----cccCccccCCCceEEEEeCchhhhhhhHHH
Confidence 1111111110 000011000000 0 0000011144 5999999999877432 2
Q ss_pred HHHHHHhc-CCcEEEcCCCCCccccc-----ChHHHHHHHHHHHhhc
Q 015903 354 VEDFCNDS-NHELIELPMAGHHVQED-----SGEELGKVISEIFRKR 394 (398)
Q Consensus 354 ~~~l~~~~-~~~~~~i~~~gH~~~~e-----~p~~~~~~i~~fl~~~ 394 (398)
+++|.+.- .+++.+++++.|.++.- ...++.+.|.+|+++.
T Consensus 289 ~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 289 AEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred HHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 34443332 56677899999987533 3457788888888764
No 118
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.17 E-value=3.2e-09 Score=93.99 Aligned_cols=242 Identities=10% Similarity=0.033 Sum_probs=128.1
Q ss_pred CCCCEEEEecCCCCCccch-hhh-h-HhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHH-------HHHHHHHHH-
Q 015903 135 ADNHTVLLIHGFPSQAYSY-RKV-L-PVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYV-------ASLESFVNE- 203 (398)
Q Consensus 135 ~~~p~vvllHG~~~~~~~~-~~~-~-~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~-------~dl~~~l~~- 203 (398)
+.+|.+|.++|.|...... ..+ + +.+.+|+..+.+..|-||...+.......-.+..|+. .+...++++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 3478899999988755444 233 4 4444599999999999987654433211122333332 233333333
Q ss_pred --hCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHH-hHHhhhhhhccCCccchhhhhhhcc
Q 015903 204 --IANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSI-FSNFLLGEIFSQDPLRASDKALTSC 280 (398)
Q Consensus 204 --l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (398)
.|..++.+.|.||||.+|...|...|..+..+-++++....... ....+.. .....+..-+........ ....
T Consensus 170 ~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vF-t~Gvls~~i~W~~L~~q~~~~~~~~~---~~~~ 245 (348)
T PF09752_consen 170 EREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVF-TEGVLSNSINWDALEKQFEDTVYEEE---ISDI 245 (348)
T ss_pred HhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcch-hhhhhhcCCCHHHHHHHhcccchhhh---hccc
Confidence 37789999999999999999999999877766666653321100 0000000 000000000000000000 0000
Q ss_pred CCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHh
Q 015903 281 GPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCND 360 (398)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~ 360 (398)
...... ....... ....... ....+.. .......+.+.. ...-.-.+.++.+++|.++|......+.+.
T Consensus 246 ~~~~~~-~~~~~~~----~~~~~~E----a~~~m~~-~md~~T~l~nf~-~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~ 314 (348)
T PF09752_consen 246 PAQNKS-LPLDSME----ERRRDRE----ALRFMRG-VMDSFTHLTNFP-VPVDPSAIIFVAAKNDAYVPRHGVLSLQEI 314 (348)
T ss_pred ccCccc-ccchhhc----cccchHH----HHHHHHH-HHHhhccccccC-CCCCCCcEEEEEecCceEechhhcchHHHh
Confidence 000000 0000000 0000000 0000000 011111111110 011133478999999999999988899998
Q ss_pred c-CCcEEEcCCCCCcc-cccChHHHHHHHHHHHh
Q 015903 361 S-NHELIELPMAGHHV-QEDSGEELGKVISEIFR 392 (398)
Q Consensus 361 ~-~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~ 392 (398)
. ++++.++++ ||.. ++-+.+.|.+.|.+-++
T Consensus 315 WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 315 WPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 8 999999997 9986 67788999999988765
No 119
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.16 E-value=1.5e-09 Score=93.87 Aligned_cols=203 Identities=14% Similarity=0.132 Sum_probs=117.2
Q ss_pred CCEEEEecCCCCCccchhhhhHhhh-c---CCeEEE--EcCCCC----CCCCCC-CCC------CCCC-CCHHHHHHHHH
Q 015903 137 NHTVLLIHGFPSQAYSYRKVLPVLS-K---NYHAIA--FDWLGF----GFSEKP-QPG------YGFD-YTLDEYVASLE 198 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~~~L~-~---g~~Vi~--~D~rG~----G~S~~~-~~~------~~~~-~~~~~~~~dl~ 198 (398)
..|.||+||++++...+..++..+. + .-.++. ++--|. |.=... ..+ .... -+....++.+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 4689999999999999999999997 4 333433 333332 221111 000 0011 35778888888
Q ss_pred HHHHHh----CCCcEEEEEeCcChHHHHHHHHhCCC-----ccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCc
Q 015903 199 SFVNEI----ANDKVSLVVQGYFSPVVVKYASKHKD-----KLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDP 269 (398)
Q Consensus 199 ~~l~~l----~~~~v~lvG~S~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (398)
.++..| +++++.+|||||||..++.|+..+.. .+..+|.+++++..........
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~----------------- 153 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQ----------------- 153 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-T-----------------
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccc-----------------
Confidence 888877 57899999999999999999988532 5899999999876542110000
Q ss_pred cchhhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeC-----
Q 015903 270 LRASDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQ----- 344 (398)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~----- 344 (398)
. . . .....+ +.... ..+.......+.. -.-++.||-|.|.
T Consensus 154 --~----------------~----~-~~~~~g-p~~~~--------~~y~~l~~~~~~~---~p~~i~VLnI~G~~~~g~ 198 (255)
T PF06028_consen 154 --N----------------Q----N-DLNKNG-PKSMT--------PMYQDLLKNRRKN---FPKNIQVLNIYGDLEDGS 198 (255)
T ss_dssp --T----------------T----T--CSTT--BSS----------HHHHHHHHTHGGG---STTT-EEEEEEEESBTTC
T ss_pred --h----------------h----h-hhcccC-CcccC--------HHHHHHHHHHHhh---CCCCeEEEEEecccCCCC
Confidence 0 0 0 000000 00000 0001111110000 1117889999998
Q ss_pred -CCCccCchhHHHHHHhc-----CCcEEEcCC--CCCcccccChHHHHHHHHHHHh
Q 015903 345 -RDRWLNNDGVEDFCNDS-----NHELIELPM--AGHHVQEDSGEELGKVISEIFR 392 (398)
Q Consensus 345 -~D~~v~~~~~~~l~~~~-----~~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl~ 392 (398)
.|-.||...+..+...+ ..+-.++.| +.|.-..|++ ++.+.|.+||-
T Consensus 199 ~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 199 NSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp SBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred CCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 78999998888777776 234455654 5798777766 68899999984
No 120
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.15 E-value=3.5e-09 Score=91.33 Aligned_cols=100 Identities=16% Similarity=0.188 Sum_probs=86.3
Q ss_pred CEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CcEEEEEeCc
Q 015903 138 HTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIAN-DKVSLVVQGY 216 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-~~v~lvG~S~ 216 (398)
|+|+++|+.+|....|..+...|.....|+.++.||.+.-... ..+++++++...+.|..... .+++|+|||+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~------~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~ 74 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQP------FASLDDMAAAYVAAIRRVQPEGPYVLLGWSL 74 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccc------cCCHHHHHHHHHHHHHHhCCCCCEEEEeecc
Confidence 5899999999999999999999999999999999999863332 35699999998888887754 5899999999
Q ss_pred ChHHHHHHHHhC---CCccceEEEECCcCc
Q 015903 217 FSPVVVKYASKH---KDKLKDLILLNPPLT 243 (398)
Q Consensus 217 Gg~ia~~~a~~~---p~~v~~lvl~~~~~~ 243 (398)
||.+|...|.+- .+.|..+++++++..
T Consensus 75 GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 75 GGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999863 457999999998776
No 121
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.15 E-value=1.3e-10 Score=99.10 Aligned_cols=163 Identities=18% Similarity=0.212 Sum_probs=87.9
Q ss_pred CCEEEEecCCCCCccchhhhh----Hhhhc-CCeEEEEcCCCC-----CCCC------------CCCCCCC-------CC
Q 015903 137 NHTVLLIHGFPSQAYSYRKVL----PVLSK-NYHAIAFDWLGF-----GFSE------------KPQPGYG-------FD 187 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~----~~L~~-g~~Vi~~D~rG~-----G~S~------------~~~~~~~-------~~ 187 (398)
++.||++||++.+...|+... ..|.+ ++..+.+|-|-- |-.. .+...|- ..
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 679999999999999886554 45555 788888886521 1110 0000000 01
Q ss_pred CCHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhC--------CCccceEEEECCcCcccCCCCchhHHHhHHh
Q 015903 188 YTLDEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASKH--------KDKLKDLILLNPPLTAKHANLPSTLSIFSNF 259 (398)
Q Consensus 188 ~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 259 (398)
..+++-.+.+.+.++..+. =..|+|+|.||.+|..++... ...++.+|++++.......
T Consensus 84 ~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------ 150 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------ 150 (212)
T ss_dssp ---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------------
T ss_pred cCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------------
Confidence 2345555566666666553 356999999999999888642 1257889999886543200
Q ss_pred hhhhhccCCccchhhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEE
Q 015903 260 LLGEIFSQDPLRASDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTT 339 (398)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl 339 (398)
+...+ ...+|++|+|
T Consensus 151 ---------------------------------~~~~~--------------------------------~~~~i~iPtl 165 (212)
T PF03959_consen 151 ---------------------------------YQELY--------------------------------DEPKISIPTL 165 (212)
T ss_dssp ---------------------------------GTTTT----------------------------------TT---EEE
T ss_pred ---------------------------------hhhhh--------------------------------ccccCCCCeE
Confidence 00000 0135599999
Q ss_pred EEeeCCCCccCchhHHHHHHhc-C-CcEEEcCCCCCccccc
Q 015903 340 VCWGQRDRWLNNDGVEDFCNDS-N-HELIELPMAGHHVQED 378 (398)
Q Consensus 340 ii~G~~D~~v~~~~~~~l~~~~-~-~~~~~i~~~gH~~~~e 378 (398)
.|+|++|.+++++.++.+.+.+ + .+++..++ ||.++..
T Consensus 166 Hv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~g-GH~vP~~ 205 (212)
T PF03959_consen 166 HVIGENDPVVPPERSEALAEMFDPDARVIEHDG-GHHVPRK 205 (212)
T ss_dssp EEEETT-SSS-HHHHHHHHHHHHHHEEEEEESS-SSS----
T ss_pred EEEeCCCCCcchHHHHHHHHhccCCcEEEEECC-CCcCcCC
Confidence 9999999999999999999999 6 78888885 9988753
No 122
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.14 E-value=1.5e-08 Score=96.30 Aligned_cols=118 Identities=19% Similarity=0.228 Sum_probs=81.8
Q ss_pred EEEEEecc----CCCCCEEEEecCCCCCccchhhhh---H---------------hhhcCCeEEEEcCC-CCCCCCCCCC
Q 015903 126 RWFCVESG----NADNHTVLLIHGFPSQAYSYRKVL---P---------------VLSKNYHAIAFDWL-GFGFSEKPQP 182 (398)
Q Consensus 126 ~l~~~~~g----~~~~p~vvllHG~~~~~~~~~~~~---~---------------~L~~g~~Vi~~D~r-G~G~S~~~~~ 182 (398)
+++|.-.. +.+.|+||+++|++|.+..+-.+. + .+.+..+++.+|.| |+|.|.....
T Consensus 62 ~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~ 141 (462)
T PTZ00472 62 HYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKA 141 (462)
T ss_pred eEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCC
Confidence 55554433 235699999999998776542211 0 12235789999975 8888865433
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-------CCCcEEEEEeCcChHHHHHHHHhCC----------CccceEEEECCcCccc
Q 015903 183 GYGFDYTLDEYVASLESFVNEI-------ANDKVSLVVQGYFSPVVVKYASKHK----------DKLKDLILLNPPLTAK 245 (398)
Q Consensus 183 ~~~~~~~~~~~~~dl~~~l~~l-------~~~~v~lvG~S~Gg~ia~~~a~~~p----------~~v~~lvl~~~~~~~~ 245 (398)
. ...+.++.++|+.++++.+ +..+++|+|+||||..+..+|.+.- -.++++++.++...+.
T Consensus 142 ~--~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 219 (462)
T PTZ00472 142 D--YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPY 219 (462)
T ss_pred C--CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChh
Confidence 2 2456688889998888753 4578999999999999988886521 1478999888866543
No 123
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.14 E-value=2.2e-09 Score=97.73 Aligned_cols=103 Identities=13% Similarity=0.120 Sum_probs=72.3
Q ss_pred CCCEEEEecCCC---CCccchhhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---h--C
Q 015903 136 DNHTVLLIHGFP---SQAYSYRKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNE---I--A 205 (398)
Q Consensus 136 ~~p~vvllHG~~---~~~~~~~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~---l--~ 205 (398)
..|+||++||++ ++.......+..+.. |+.|+.+|+|-.-+... ...++|..+.+..+.+. + +
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~-------p~~~~d~~~a~~~l~~~~~~~g~d 150 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPF-------PAALEDAYAAYRWLRANAAELGID 150 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCC-------CchHHHHHHHHHHHHhhhHhhCCC
Confidence 479999999997 344445444444443 99999999995544322 23456655555555544 2 3
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCCC----ccceEEEECCcCccc
Q 015903 206 NDKVSLVVQGYFSPVVVKYASKHKD----KLKDLILLNPPLTAK 245 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~ 245 (398)
.+++.++|+|.||.+++.++..-.+ ...+.+++.|..+..
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 6789999999999999999887543 578889999876654
No 124
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.13 E-value=6.1e-10 Score=91.07 Aligned_cols=185 Identities=14% Similarity=0.195 Sum_probs=119.4
Q ss_pred CCeEEEEEeccCCCC-CEEEEecCCCCCcc-chhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCC------CCCCCCHHHH
Q 015903 123 EIFRWFCVESGNADN-HTVLLIHGFPSQAY-SYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPG------YGFDYTLDEY 193 (398)
Q Consensus 123 ~g~~l~~~~~g~~~~-p~vvllHG~~~~~~-~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~------~~~~~~~~~~ 193 (398)
.|+.-+.. |+.+. ..||++--+.+-.. .-+..+..++. ||.|+++|+. .|.--.+... +-...+....
T Consensus 26 ~gldaYv~--gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~-~Gdp~~~~~~~~~~~~w~~~~~~~~~ 102 (242)
T KOG3043|consen 26 GGLDAYVV--GSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFF-RGDPWSPSLQKSERPEWMKGHSPPKI 102 (242)
T ss_pred cCeeEEEe--cCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhh-cCCCCCCCCChhhhHHHHhcCCcccc
Confidence 55554444 33333 36666665544333 35666777777 9999999986 2311111100 0001223334
Q ss_pred HHHHHHHHHHh---C-CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCc
Q 015903 194 VASLESFVNEI---A-NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDP 269 (398)
Q Consensus 194 ~~dl~~~l~~l---~-~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (398)
-+++..+++.+ + .++|-++|.+|||.++..+....| .+.+++.+-|.....
T Consensus 103 ~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d~------------------------ 157 (242)
T KOG3043|consen 103 WKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVDS------------------------ 157 (242)
T ss_pred hhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCCh------------------------
Confidence 44566666555 3 568999999999999999988887 677777665532110
Q ss_pred cchhhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCcc
Q 015903 270 LRASDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWL 349 (398)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v 349 (398)
.+. .++++|+|++.|+.|..+
T Consensus 158 -----------------------------------------------------~D~------~~vk~Pilfl~ae~D~~~ 178 (242)
T KOG3043|consen 158 -----------------------------------------------------ADI------ANVKAPILFLFAELDEDV 178 (242)
T ss_pred -----------------------------------------------------hHH------hcCCCCEEEEeecccccC
Confidence 011 245999999999999999
Q ss_pred CchhHHHHHHhc------CCcEEEcCCCCCcccc-----cCh------HHHHHHHHHHHhhc
Q 015903 350 NNDGVEDFCNDS------NHELIELPMAGHHVQE-----DSG------EELGKVISEIFRKR 394 (398)
Q Consensus 350 ~~~~~~~l~~~~------~~~~~~i~~~gH~~~~-----e~p------~~~~~~i~~fl~~~ 394 (398)
|+....++.+.+ +.++.+++|.+|.+.. +.| ++..+.+..|++..
T Consensus 179 p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 179 PPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred CHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 999988888887 3369999999998763 233 55667777777653
No 125
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.12 E-value=8.3e-10 Score=98.94 Aligned_cols=102 Identities=14% Similarity=0.274 Sum_probs=79.6
Q ss_pred CCEEEEecCCCCCccch-----hhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHH-----HHHHHHHHHhC
Q 015903 137 NHTVLLIHGFPSQAYSY-----RKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYV-----ASLESFVNEIA 205 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~-----~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~-----~dl~~~l~~l~ 205 (398)
++++|++|-+-.....| ..++..|.+ |..|+.+++++-..+... .++++++ +.+..+.+..+
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~-------~~~edYi~e~l~~aid~v~~itg 179 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA-------KNLEDYILEGLSEAIDTVKDITG 179 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh-------ccHHHHHHHHHHHHHHHHHHHhC
Confidence 57899999887666665 445666666 999999999987766542 3455655 44445555567
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCCCc-cceEEEECCcCccc
Q 015903 206 NDKVSLVVQGYFSPVVVKYASKHKDK-LKDLILLNPPLTAK 245 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~ 245 (398)
.++|.++|+|.||.++..+++.++.+ |+.++++.++.+..
T Consensus 180 ~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 180 QKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred ccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhc
Confidence 89999999999999999999998887 99999999877665
No 126
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.12 E-value=1.1e-09 Score=93.90 Aligned_cols=107 Identities=17% Similarity=0.152 Sum_probs=72.4
Q ss_pred CCCEEEEecCCCCCccchhhhhHhhh---------cCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--
Q 015903 136 DNHTVLLIHGFPSQAYSYRKVLPVLS---------KNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI-- 204 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~~~~~~~L~---------~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l-- 204 (398)
++.+||||||.+++...++.+...+. ..++++++|+......-.... .....+.+.+.+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~---l~~q~~~~~~~i~~i~~~~~~ 79 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRT---LQRQAEFLAEAIKYILELYKS 79 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccccc---HHHHHHHHHHHHHHHHHhhhh
Confidence 46799999999999888877765441 168899999876432211110 0111233334445555555
Q ss_pred ---CCCcEEEEEeCcChHHHHHHHHhCC---CccceEEEECCcCccc
Q 015903 205 ---ANDKVSLVVQGYFSPVVVKYASKHK---DKLKDLILLNPPLTAK 245 (398)
Q Consensus 205 ---~~~~v~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~ 245 (398)
+.++++||||||||.++-.++...+ +.|+.+|.+++|....
T Consensus 80 ~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 80 NRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred ccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 4678999999999998888776543 4799999999877655
No 127
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.07 E-value=2.4e-09 Score=89.73 Aligned_cols=107 Identities=16% Similarity=0.161 Sum_probs=75.9
Q ss_pred CCCCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------C
Q 015903 134 NADNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI-------A 205 (398)
Q Consensus 134 ~~~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l-------~ 205 (398)
.+.-|.|+|+||+.-....|..++.+++. ||-|+++++-..-. + .......+....++++..-++.+ +
T Consensus 43 ~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~---p-~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~n 118 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP---P-DGQDEIKSAASVINWLPEGLQHVLPENVEAN 118 (307)
T ss_pred CCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC---C-CchHHHHHHHHHHHHHHhhhhhhCCCCcccc
Confidence 34479999999999988899999999999 99999999864311 1 11000112233333333333332 3
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCC-C-ccceEEEECCcCcc
Q 015903 206 NDKVSLVVQGYFSPVVVKYASKHK-D-KLKDLILLNPPLTA 244 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~~p-~-~v~~lvl~~~~~~~ 244 (398)
..++.++|||.||-.|..+|..+. + .+.++|.++|....
T Consensus 119 l~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 119 LSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred cceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 468999999999999999998773 2 58999999997543
No 128
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.07 E-value=2.2e-08 Score=83.13 Aligned_cols=246 Identities=14% Similarity=0.162 Sum_probs=135.3
Q ss_pred CCCCEEEEecCCCCCccchhhhhHhhhc----CCeEEEEcCCCCCCCC---CCCC--CCCCCCCHHHHHHHHHHHHHHhC
Q 015903 135 ADNHTVLLIHGFPSQAYSYRKVLPVLSK----NYHAIAFDWLGFGFSE---KPQP--GYGFDYTLDEYVASLESFVNEIA 205 (398)
Q Consensus 135 ~~~p~vvllHG~~~~~~~~~~~~~~L~~----g~~Vi~~D~rG~G~S~---~~~~--~~~~~~~~~~~~~dl~~~l~~l~ 205 (398)
.+++.|++++|.+|....|.+++..|-. .+.++.+-..||-.-. .... .-...++.++.++.=.++++..-
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~ 106 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYV 106 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhC
Confidence 4578999999999999999998877765 3669998888885443 1111 11125678888888888888753
Q ss_pred --CCcEEEEEeCcChHHHHHHHHhCC--CccceEEEECCcCcccCCCCc-----hhHHHhHHhh-hhhhccCCccch-hh
Q 015903 206 --NDKVSLVVQGYFSPVVVKYASKHK--DKLKDLILLNPPLTAKHANLP-----STLSIFSNFL-LGEIFSQDPLRA-SD 274 (398)
Q Consensus 206 --~~~v~lvG~S~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~-~~ 274 (398)
..+++++|||.|+++.+....... -.|.+++++=|.......... .....+..-. +....-...... .+
T Consensus 107 Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~ir 186 (301)
T KOG3975|consen 107 PKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFIR 186 (301)
T ss_pred CCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHHH
Confidence 458999999999999999887432 257777877664322211100 0000000000 000000000000 00
Q ss_pred hhhhc---cCCCCCChhh--hhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCcc
Q 015903 275 KALTS---CGPYQMKEDD--AMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWL 349 (398)
Q Consensus 275 ~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v 349 (398)
.++-. +......+-. ...+..+..... ......++............ ++-.+-+.+.+|..|.++
T Consensus 187 ~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn--------~v~la~qEm~eV~~~d~e~~--een~d~l~Fyygt~DgW~ 256 (301)
T KOG3975|consen 187 FILIKFMLCGSNGPQEFLSTALFLTHPQVVRN--------SVGLAAQEMEEVTTRDIEYC--EENLDSLWFYYGTNDGWV 256 (301)
T ss_pred HHHHHHhcccCCCcHHHHhhHHHhhcHHHHHH--------HhhhchHHHHHHHHhHHHHH--HhcCcEEEEEccCCCCCc
Confidence 00000 0000000000 000000000000 00000111111111111111 111578899999999999
Q ss_pred CchhHHHHHHhc---CCcEEEcCCCCCcccccChHHHHHHHHHHH
Q 015903 350 NNDGVEDFCNDS---NHELIELPMAGHHVQEDSGEELGKVISEIF 391 (398)
Q Consensus 350 ~~~~~~~l~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 391 (398)
|.+....+.+.+ +.++-+ ++.-|.+...+.+.++..+.+.+
T Consensus 257 p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 257 PSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred chHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 999999999998 555555 77899998888888888887765
No 129
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.02 E-value=1.9e-09 Score=91.80 Aligned_cols=38 Identities=13% Similarity=0.270 Sum_probs=31.8
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcc
Q 015903 206 NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 244 (398)
.++|.|+|.|.||-+|+.+|..+| .|+++|.++|....
T Consensus 21 ~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 21 PDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred CCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 368999999999999999999998 89999999986543
No 130
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.00 E-value=4.7e-09 Score=84.90 Aligned_cols=96 Identities=17% Similarity=0.235 Sum_probs=72.2
Q ss_pred CEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcEEEE
Q 015903 138 HTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI----ANDKVSLV 212 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~lv 212 (398)
..+||+-|=++=...=..+...|++ |+.|+.+|-+-+=.+. .+.++.+.|+..+++.. +.++++|+
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~---------rtP~~~a~Dl~~~i~~y~~~w~~~~vvLi 73 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE---------RTPEQTAADLARIIRHYRARWGRKRVVLI 73 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh---------CCHHHHHHHHHHHHHHHHHHhCCceEEEE
Confidence 3677787766544333567788888 9999999977554442 35677777777777654 67899999
Q ss_pred EeCcChHHHHHHHHhCC----CccceEEEECCcC
Q 015903 213 VQGYFSPVVVKYASKHK----DKLKDLILLNPPL 242 (398)
Q Consensus 213 G~S~Gg~ia~~~a~~~p----~~v~~lvl~~~~~ 242 (398)
|+|+|+-+.-....+.| ++|+.++|+++..
T Consensus 74 GYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 74 GYSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred eecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 99999988877777766 3799999999854
No 131
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.98 E-value=4.6e-09 Score=84.55 Aligned_cols=202 Identities=11% Similarity=0.119 Sum_probs=118.2
Q ss_pred EEEEEeccC-CCCCEEEEecCCC---CCcc-chhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 015903 126 RWFCVESGN-ADNHTVLLIHGFP---SQAY-SYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESF 200 (398)
Q Consensus 126 ~l~~~~~g~-~~~p~vvllHG~~---~~~~-~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~ 200 (398)
+-....+|+ ...+..||+||+- ++.. +....-..+..||+|..+++ +.+...... ..++.+...-+.-+
T Consensus 55 ~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q~htL---~qt~~~~~~gv~fi 128 (270)
T KOG4627|consen 55 RQLVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQVHTL---EQTMTQFTHGVNFI 128 (270)
T ss_pred ceEEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCcccccH---HHHHHHHHHHHHHH
Confidence 444445564 3468999999984 2222 33444466666999999865 333322110 12333444444444
Q ss_pred HHHhC-CCcEEEEEeCcChHHHHHHHHhC-CCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhh
Q 015903 201 VNEIA-NDKVSLVVQGYFSPVVVKYASKH-KDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALT 278 (398)
Q Consensus 201 l~~l~-~~~v~lvG~S~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (398)
++... .+.+.+-|||.|+.+|+....+. ..+|.+++++++.+...... ..-.. .
T Consensus 129 lk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~---------~te~g----~----------- 184 (270)
T KOG4627|consen 129 LKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELS---------NTESG----N----------- 184 (270)
T ss_pred HHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHh---------CCccc----c-----------
Confidence 44443 34566779999999999987763 44899999998876433100 00000 0
Q ss_pred ccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHH
Q 015903 279 SCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFC 358 (398)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~ 358 (398)
.-.+..+.... ....+..+ ..+++|+|++.|++|.---.++.+.+.
T Consensus 185 ---dlgLt~~~ae~-------------------------~Scdl~~~------~~v~~~ilVv~~~~espklieQnrdf~ 230 (270)
T KOG4627|consen 185 ---DLGLTERNAES-------------------------VSCDLWEY------TDVTVWILVVAAEHESPKLIEQNRDFA 230 (270)
T ss_pred ---ccCcccchhhh-------------------------cCccHHHh------cCceeeeeEeeecccCcHHHHhhhhHH
Confidence 00000000000 00011111 355999999999999766678888888
Q ss_pred Hhc-CCcEEEcCCCCCcccccCh----HHHHHHHHHHH
Q 015903 359 NDS-NHELIELPMAGHHVQEDSG----EELGKVISEIF 391 (398)
Q Consensus 359 ~~~-~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl 391 (398)
..+ .+++..+++.+|+-.+++. ..+...+..|+
T Consensus 231 ~q~~~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 231 DQLRKASFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred HHhhhcceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 888 8999999999998755432 34444555544
No 132
>PRK04940 hypothetical protein; Provisional
Probab=98.97 E-value=1.1e-07 Score=76.94 Aligned_cols=170 Identities=13% Similarity=0.160 Sum_probs=99.1
Q ss_pred EEEecCCCCCccc--hhhh-hHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C-CCcEEEE
Q 015903 140 VLLIHGFPSQAYS--YRKV-LPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI---A-NDKVSLV 212 (398)
Q Consensus 140 vvllHG~~~~~~~--~~~~-~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---~-~~~v~lv 212 (398)
||++||+.++... .+.. ...+..+.+++ +++ .....+.++.+.+.+..+ + .+++.||
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~--------------~~~P~~a~~~l~~~i~~~~~~~~~~~~~li 65 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYS--------------TLHPKHDMQHLLKEVDKMLQLSDDERPLIC 65 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECC--------------CCCHHHHHHHHHHHHHHhhhccCCCCcEEE
Confidence 8999999988877 4221 12231234433 221 022344444555555432 1 2579999
Q ss_pred EeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhccCCCCCChhhhhh
Q 015903 213 VQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYQMKEDDAMV 292 (398)
Q Consensus 213 G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (398)
|.|+||+.|..+|.++. + ..|+++|...+.. . +...... . ..
T Consensus 66 GSSLGGyyA~~La~~~g--~-~aVLiNPAv~P~~--------~-----L~~~ig~------------------~-~~--- 107 (180)
T PRK04940 66 GVGLGGYWAERIGFLCG--I-RQVIFNPNLFPEE--------N-----MEGKIDR------------------P-EE--- 107 (180)
T ss_pred EeChHHHHHHHHHHHHC--C-CEEEECCCCChHH--------H-----HHHHhCC------------------C-cc---
Confidence 99999999999999984 3 5678899765430 0 0000000 0 00
Q ss_pred hhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHhcCC-cEEEcCCC
Q 015903 293 YRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCNDSNH-ELIELPMA 371 (398)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~-~~~~i~~~ 371 (398)
+. .+. ...+.+++ . +-.-..+++..+.|++.+...+.+... ++ +..+.+|+
T Consensus 108 y~--------------~~~-------~~h~~eL~-~----~~p~r~~vllq~gDEvLDyr~a~~~y~--~~y~~~v~~GG 159 (180)
T PRK04940 108 YA--------------DIA-------TKCVTNFR-E----KNRDRCLVILSRNDEVLDSQRTAEELH--PYYEIVWDEEQ 159 (180)
T ss_pred hh--------------hhh-------HHHHHHhh-h----cCcccEEEEEeCCCcccCHHHHHHHhc--cCceEEEECCC
Confidence 00 011 11122221 0 113346999999999999877765555 34 68888988
Q ss_pred CCcccccChHHHHHHHHHHHhh
Q 015903 372 GHHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 372 gH~~~~e~p~~~~~~i~~fl~~ 393 (398)
.|.+ ++-++....|.+|+..
T Consensus 160 dH~f--~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 160 THKF--KNISPHLQRIKAFKTL 179 (180)
T ss_pred CCCC--CCHHHHHHHHHHHHhc
Confidence 8865 3567788889999853
No 133
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.96 E-value=7.6e-09 Score=95.53 Aligned_cols=106 Identities=17% Similarity=0.230 Sum_probs=59.6
Q ss_pred CCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCC-CCCCCC-CCC-------------------CCC---CCC-
Q 015903 136 DNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGF-GFSEKP-QPG-------------------YGF---DYT- 189 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~-G~S~~~-~~~-------------------~~~---~~~- 189 (398)
+-|+|||-||++++...|..++..|+. ||-|+++|+|.. +-.... ... ... ...
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 358999999999999999999999998 999999999943 210000 000 000 000
Q ss_pred ------HHHHHHHHHHHHHHh--------------------------CCCcEEEEEeCcChHHHHHHHHhCCCccceEEE
Q 015903 190 ------LDEYVASLESFVNEI--------------------------ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLIL 237 (398)
Q Consensus 190 ------~~~~~~dl~~~l~~l--------------------------~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl 237 (398)
++.-+.++..+++.+ +.+++.++|||+||..++..+.+. .++++.|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 111222344343322 234789999999999999888776 68999999
Q ss_pred ECCcC
Q 015903 238 LNPPL 242 (398)
Q Consensus 238 ~~~~~ 242 (398)
+++..
T Consensus 258 LD~W~ 262 (379)
T PF03403_consen 258 LDPWM 262 (379)
T ss_dssp ES---
T ss_pred eCCcc
Confidence 99964
No 134
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.95 E-value=6.3e-09 Score=93.09 Aligned_cols=132 Identities=18% Similarity=0.116 Sum_probs=73.3
Q ss_pred Cccccccccccc-cCCeEEEE---Eecc-CCCCCEEEEecCCCCCccc--------------h----hhhhHhhhc-CCe
Q 015903 110 IFGLDLGSASQA-DEIFRWFC---VESG-NADNHTVLLIHGFPSQAYS--------------Y----RKVLPVLSK-NYH 165 (398)
Q Consensus 110 ~~G~~~~~~~~~-~~g~~l~~---~~~g-~~~~p~vvllHG~~~~~~~--------------~----~~~~~~L~~-g~~ 165 (398)
.+|.+.+-..+. .++.++.. .+.+ ++.-|.||++||-++..+. + ..+...|++ ||-
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYV 162 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYV 162 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSE
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCE
Confidence 677766655554 45555432 2333 3335899999998754432 1 123556777 999
Q ss_pred EEEEcCCCCCCCCCCCCCC-CCCCCHHHHHH---------------HHHHHHHHh------CCCcEEEEEeCcChHHHHH
Q 015903 166 AIAFDWLGFGFSEKPQPGY-GFDYTLDEYVA---------------SLESFVNEI------ANDKVSLVVQGYFSPVVVK 223 (398)
Q Consensus 166 Vi~~D~rG~G~S~~~~~~~-~~~~~~~~~~~---------------dl~~~l~~l------~~~~v~lvG~S~Gg~ia~~ 223 (398)
|+++|.+|+|+........ +..++...++. |....++.+ +.++|.++|+||||+.++.
T Consensus 163 vla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~ 242 (390)
T PF12715_consen 163 VLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWW 242 (390)
T ss_dssp EEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHH
Confidence 9999999999876544221 11222222222 333344554 3568999999999999999
Q ss_pred HHHhCCCccceEEEECCcC
Q 015903 224 YASKHKDKLKDLILLNPPL 242 (398)
Q Consensus 224 ~a~~~p~~v~~lvl~~~~~ 242 (398)
+|+.. ++|++.|..+-..
T Consensus 243 LaALD-dRIka~v~~~~l~ 260 (390)
T PF12715_consen 243 LAALD-DRIKATVANGYLC 260 (390)
T ss_dssp HHHH--TT--EEEEES-B-
T ss_pred HHHcc-hhhHhHhhhhhhh
Confidence 99986 5899888776543
No 135
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.95 E-value=1e-08 Score=83.55 Aligned_cols=175 Identities=13% Similarity=0.135 Sum_probs=111.2
Q ss_pred CEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCC--------CCCCC------CCCCCCCCCCHHHHHHHHHHHHH
Q 015903 138 HTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGF--------GFSEK------PQPGYGFDYTLDEYVASLESFVN 202 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~--------G~S~~------~~~~~~~~~~~~~~~~dl~~~l~ 202 (398)
.+||++||.+.+...|..++..|.- +..-|++.-|-. +.... ..............++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 4899999999999999777766654 666666543311 10000 00000012335556666777776
Q ss_pred Hh---C--CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhh
Q 015903 203 EI---A--NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKAL 277 (398)
Q Consensus 203 ~l---~--~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (398)
+. + ..++.+-|.|+||.+++..+..+|..+.+++...+.........+
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~--------------------------- 136 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLP--------------------------- 136 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhcc---------------------------
Confidence 54 2 457899999999999999999998888887776664321100000
Q ss_pred hccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHH
Q 015903 278 TSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDF 357 (398)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l 357 (398)
. +.. ..+ ..|++..||+.|++||....+..
T Consensus 137 -----------------~-~~~-------------------------------~~~-~~~i~~~Hg~~d~~vp~~~g~~s 166 (206)
T KOG2112|consen 137 -----------------G-WLP-------------------------------GVN-YTPILLCHGTADPLVPFRFGEKS 166 (206)
T ss_pred -----------------C-Ccc-------------------------------ccC-cchhheecccCCceeehHHHHHH
Confidence 0 000 000 57999999999999999876665
Q ss_pred HHhc-----CCcEEEcCCCCCcccccChHHHHHHHHHHHhh
Q 015903 358 CNDS-----NHELIELPMAGHHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 358 ~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 393 (398)
.+.+ .++++.++|.+|....+.-+ .+..|+.+
T Consensus 167 ~~~l~~~~~~~~f~~y~g~~h~~~~~e~~----~~~~~~~~ 203 (206)
T KOG2112|consen 167 AQFLKSLGVRVTFKPYPGLGHSTSPQELD----DLKSWIKT 203 (206)
T ss_pred HHHHHHcCCceeeeecCCccccccHHHHH----HHHHHHHH
Confidence 5555 67888899999986543333 34455543
No 136
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.95 E-value=6.4e-08 Score=79.46 Aligned_cols=59 Identities=19% Similarity=0.423 Sum_probs=45.4
Q ss_pred CCCCCEEEEeeCCCCccCchhHHHHHHhc-CCcEEEcCCCCCcccccCh--HHHHHHHHHHHh
Q 015903 333 SWKIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELIELPMAGHHVQEDSG--EELGKVISEIFR 392 (398)
Q Consensus 333 ~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~ 392 (398)
.+++|.|.|.|+.|.++|...++.|++.+ +..++.-+ +||+++...+ +.+.+.|..|++
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAKYKEKIADFIQSFLQ 222 (230)
T ss_pred CCCCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchHHHHHHHHHHHHHHH
Confidence 45999999999999999999999999999 77666677 4999875432 344444444443
No 137
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.94 E-value=1.2e-08 Score=86.84 Aligned_cols=115 Identities=11% Similarity=-0.017 Sum_probs=66.8
Q ss_pred CCeEEEEEeccC------CCC-CEEEEecCCCCCccc-hhhhhHhh-------hc-CCeEEEEcCCC-CCCCCCCCCCCC
Q 015903 123 EIFRWFCVESGN------ADN-HTVLLIHGFPSQAYS-YRKVLPVL-------SK-NYHAIAFDWLG-FGFSEKPQPGYG 185 (398)
Q Consensus 123 ~g~~l~~~~~g~------~~~-p~vvllHG~~~~~~~-~~~~~~~L-------~~-g~~Vi~~D~rG-~G~S~~~~~~~~ 185 (398)
.|..+.|+-+-+ .+. |.|||+||.|..... ...+...+ .+ ++-|+++.+-- +..++...
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t---- 245 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT---- 245 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccccc----
Confidence 445555554432 223 899999999865443 32222211 11 34455554211 11121111
Q ss_pred CCCCHHHHHHHHHHH-HHHhC--CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcC
Q 015903 186 FDYTLDEYVASLESF-VNEIA--NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPL 242 (398)
Q Consensus 186 ~~~~~~~~~~dl~~~-l~~l~--~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 242 (398)
..-.....+.+.+. .++.+ ..||+++|.|+||+-++.++.++|+.+.+.+++++..
T Consensus 246 -~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 246 -LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred -chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 11123333444422 23333 4589999999999999999999999999999998853
No 138
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.91 E-value=2.4e-09 Score=95.11 Aligned_cols=95 Identities=17% Similarity=0.146 Sum_probs=67.9
Q ss_pred CCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCC--CCCCCCCCCCCC--CCCHHHHHHHHHHHHHHh------
Q 015903 136 DNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGF--GFSEKPQPGYGF--DYTLDEYVASLESFVNEI------ 204 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~--G~S~~~~~~~~~--~~~~~~~~~dl~~~l~~l------ 204 (398)
..|.||+-||.|+....|..+.+.|++ ||-|.++|.+|. |+........+. ..-+.+-..|+..+++.+
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 469999999999999999999999999 999999999995 444332221100 111233334444444433
Q ss_pred -------CCCcEEEEEeCcChHHHHHHHHhCCC
Q 015903 205 -------ANDKVSLVVQGYFSPVVVKYASKHKD 230 (398)
Q Consensus 205 -------~~~~v~lvG~S~Gg~ia~~~a~~~p~ 230 (398)
+..+|.++|||+||+.++..+..+.+
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhcccccc
Confidence 34589999999999999999876544
No 139
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.90 E-value=1.2e-08 Score=91.12 Aligned_cols=61 Identities=15% Similarity=0.187 Sum_probs=44.9
Q ss_pred CCCCCEEEEeeCCCCccCchhHHHHHHhc---C---CcEEEcCCCCCccc-ccChHHHHHHHHHHHhh
Q 015903 333 SWKIPTTVCWGQRDRWLNNDGVEDFCNDS---N---HELIELPMAGHHVQ-EDSGEELGKVISEIFRK 393 (398)
Q Consensus 333 ~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~---~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 393 (398)
..++|++|.+|..|.++|+...+.+.+.+ + ++++.+++.+|... ........+.|.+-++.
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRFAG 284 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHHCC
Confidence 44899999999999999999988888877 3 56777888999763 33334444555554443
No 140
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.90 E-value=1.3e-07 Score=80.55 Aligned_cols=95 Identities=17% Similarity=0.111 Sum_probs=71.9
Q ss_pred EecCCC--CCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCCcEEEEEeCcCh
Q 015903 142 LIHGFP--SQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNE-IANDKVSLVVQGYFS 218 (398)
Q Consensus 142 llHG~~--~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-l~~~~v~lvG~S~Gg 218 (398)
++|..+ ++...|..+...|...+.|+.+|.+|++.+.... .+.+++++.+...+.. ....+++++|||+||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg 75 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLP------ASADALVEAQAEAVLRAAGGRPFVLVGHSSGG 75 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCC------CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHH
Confidence 344433 6677899999999889999999999998765433 3567777765554443 445689999999999
Q ss_pred HHHHHHHHh---CCCccceEEEECCcC
Q 015903 219 PVVVKYASK---HKDKLKDLILLNPPL 242 (398)
Q Consensus 219 ~ia~~~a~~---~p~~v~~lvl~~~~~ 242 (398)
.++...+.+ .++.+.+++++++..
T Consensus 76 ~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 76 LLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 999998886 356789999888644
No 141
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.81 E-value=3.2e-08 Score=85.97 Aligned_cols=99 Identities=16% Similarity=0.054 Sum_probs=69.1
Q ss_pred CEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCcEEEEEeC
Q 015903 138 HTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIA--NDKVSLVVQG 215 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~--~~~v~lvG~S 215 (398)
..|+++-|..+-.+. --+...+.-||.|+.+++||+++|...+.+ ..+...+-.-+.-.|+.++ .+.|+++|+|
T Consensus 244 ~LvIC~EGNAGFYEv-G~m~tP~~lgYsvLGwNhPGFagSTG~P~p---~n~~nA~DaVvQfAI~~Lgf~~edIilygWS 319 (517)
T KOG1553|consen 244 DLVICFEGNAGFYEV-GVMNTPAQLGYSVLGWNHPGFAGSTGLPYP---VNTLNAADAVVQFAIQVLGFRQEDIILYGWS 319 (517)
T ss_pred eEEEEecCCccceEe-eeecChHHhCceeeccCCCCccccCCCCCc---ccchHHHHHHHHHHHHHcCCCccceEEEEee
Confidence 467777776653332 112233334999999999999999887754 2333333233344556665 4679999999
Q ss_pred cChHHHHHHHHhCCCccceEEEECCc
Q 015903 216 YFSPVVVKYASKHKDKLKDLILLNPP 241 (398)
Q Consensus 216 ~Gg~ia~~~a~~~p~~v~~lvl~~~~ 241 (398)
.||..++..|..+|+ |+++|+-+..
T Consensus 320 IGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEeecch
Confidence 999999999999996 8999886653
No 142
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.73 E-value=4.5e-08 Score=91.60 Aligned_cols=95 Identities=20% Similarity=0.369 Sum_probs=71.9
Q ss_pred CCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHH
Q 015903 148 SQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYAS 226 (398)
Q Consensus 148 ~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~ 226 (398)
.....|..+++.|.+ ||.+ ..|++|+|.+.+.... .....+++.+.++++.+..+.++++|+||||||.++..++.
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~--~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNR--LPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCcccccc--HHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHH
Confidence 456789999999999 7654 8999999998665321 11234455555555555667789999999999999999999
Q ss_pred hCCC----ccceEEEECCcCccc
Q 015903 227 KHKD----KLKDLILLNPPLTAK 245 (398)
Q Consensus 227 ~~p~----~v~~lvl~~~~~~~~ 245 (398)
.+|+ .|+.+|.++++....
T Consensus 182 ~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HCCHhHHhHhccEEEECCCCCCC
Confidence 8886 478999999876654
No 143
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.69 E-value=1e-06 Score=81.36 Aligned_cols=82 Identities=22% Similarity=0.265 Sum_probs=64.3
Q ss_pred hhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCCcEEEEEeCcChHHHHHHHHhCC
Q 015903 155 KVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI-----ANDKVSLVVQGYFSPVVVKYASKHK 229 (398)
Q Consensus 155 ~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l-----~~~~v~lvG~S~Gg~ia~~~a~~~p 229 (398)
.+-..|..|+.|+.+.+. .. +.+ ..+++|.......+++.+ +..+.+|+|.|.||+.++++|+.+|
T Consensus 92 evG~AL~~GHPvYFV~F~----p~-P~p----gQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~P 162 (581)
T PF11339_consen 92 EVGVALRAGHPVYFVGFF----PE-PEP----GQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRP 162 (581)
T ss_pred HHHHHHHcCCCeEEEEec----CC-CCC----CCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCc
Confidence 445678889999988775 12 222 357888888777777765 2348899999999999999999999
Q ss_pred CccceEEEECCcCccc
Q 015903 230 DKLKDLILLNPPLTAK 245 (398)
Q Consensus 230 ~~v~~lvl~~~~~~~~ 245 (398)
+.+.-+|+.+++...+
T Consensus 163 d~~gplvlaGaPlsyw 178 (581)
T PF11339_consen 163 DLVGPLVLAGAPLSYW 178 (581)
T ss_pred CccCceeecCCCcccc
Confidence 9999999998877655
No 144
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.66 E-value=1.6e-08 Score=85.40 Aligned_cols=101 Identities=17% Similarity=0.169 Sum_probs=56.3
Q ss_pred CEEEEecCCCC-CccchhhhhHhhhc-CCe---EEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEE
Q 015903 138 HTVLLIHGFPS-QAYSYRKVLPVLSK-NYH---AIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLV 212 (398)
Q Consensus 138 p~vvllHG~~~-~~~~~~~~~~~L~~-g~~---Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lv 212 (398)
.||||+||.++ ....|..+.+.|.+ ||. |+++++-................+..++.+-|..++++-+. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 48999999998 66789999999988 998 89999854433221110000001123555556666666688 99999
Q ss_pred EeCcChHHHHHHHHhCCCccceEEEECC
Q 015903 213 VQGYFSPVVVKYASKHKDKLKDLILLNP 240 (398)
Q Consensus 213 G~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 240 (398)
|||+||.++-.+.... .-++..+-+.+
T Consensus 81 gHS~G~~iaR~yi~~~-~~~d~~~~lg~ 107 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG-GGADKVVNLGP 107 (219)
T ss_dssp EETCHHHHHHHHHHHC-TGGGTEEE---
T ss_pred EcCCcCHHHHHHHHHc-CCCCcccCccc
Confidence 9999999888776543 33344443333
No 145
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.62 E-value=7.5e-07 Score=76.56 Aligned_cols=114 Identities=17% Similarity=0.074 Sum_probs=79.5
Q ss_pred EEeccCC-CCCEEEEecCCCCCccchhhhh--Hhhhc--CCeEEEEcCC-------CCCCCCCCCCCCCCCCCHHHHHHH
Q 015903 129 CVESGNA-DNHTVLLIHGFPSQAYSYRKVL--PVLSK--NYHAIAFDWL-------GFGFSEKPQPGYGFDYTLDEYVAS 196 (398)
Q Consensus 129 ~~~~g~~-~~p~vvllHG~~~~~~~~~~~~--~~L~~--g~~Vi~~D~r-------G~G~S~~~~~~~~~~~~~~~~~~d 196 (398)
|.+.+.+ ..|.||++||..++...+.... ..|++ ||-|+.+|-- +++.+..+........+...+.+.
T Consensus 52 ~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~l 131 (312)
T COG3509 52 YVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRAL 131 (312)
T ss_pred EcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHH
Confidence 3444433 3579999999998887765554 56665 9999999522 233333333211122344555555
Q ss_pred HHHHHHHhCCC--cEEEEEeCcChHHHHHHHHhCCCccceEEEECCcC
Q 015903 197 LESFVNEIAND--KVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPL 242 (398)
Q Consensus 197 l~~~l~~l~~~--~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 242 (398)
+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 132 va~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 132 VAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 66666666665 89999999999999999999999999999888765
No 146
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.61 E-value=2.8e-07 Score=79.24 Aligned_cols=105 Identities=11% Similarity=0.153 Sum_probs=68.6
Q ss_pred CCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCC------CCCCCC-------------CCC---CC---H
Q 015903 137 NHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSE------KPQPGY-------------GFD---YT---L 190 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~------~~~~~~-------------~~~---~~---~ 190 (398)
-|.|||-||++++...|..+.-.|+. ||-|.+++.|-+..+. ...... +.. .. .
T Consensus 118 ~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeqv 197 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQV 197 (399)
T ss_pred ccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHHH
Confidence 48999999999999999999999988 9999999998653321 100000 000 00 1
Q ss_pred HHHHHHHH---HHHHHh------------------------CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcC
Q 015903 191 DEYVASLE---SFVNEI------------------------ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPL 242 (398)
Q Consensus 191 ~~~~~dl~---~~l~~l------------------------~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 242 (398)
..-++.+. .+++.+ +-.++.++|||+||..++.....+ ..+++.|+++...
T Consensus 198 ~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~WM 275 (399)
T KOG3847|consen 198 GQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIALDAWM 275 (399)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeeeeeee
Confidence 11111111 122222 123678999999999888777665 4799999988854
No 147
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.61 E-value=1.4e-06 Score=82.80 Aligned_cols=121 Identities=19% Similarity=0.188 Sum_probs=78.6
Q ss_pred CeEEEEEecc----CCCCCEEEEecCCCCCccchhhhhH-------------------hhhcCCeEEEEcCC-CCCCCCC
Q 015903 124 IFRWFCVESG----NADNHTVLLIHGFPSQAYSYRKVLP-------------------VLSKNYHAIAFDWL-GFGFSEK 179 (398)
Q Consensus 124 g~~l~~~~~g----~~~~p~vvllHG~~~~~~~~~~~~~-------------------~L~~g~~Vi~~D~r-G~G~S~~ 179 (398)
+..++|.-.. +.+.|+||++.|++|++..+-.+.+ .+.+..+++.+|.| |.|.|..
T Consensus 23 ~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~ 102 (415)
T PF00450_consen 23 NAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYG 102 (415)
T ss_dssp TEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EE
T ss_pred CcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeec
Confidence 4466665443 2457999999999988876633221 12235789999966 9999976
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHh-------CCCcEEEEEeCcChHHHHHHHHh----C------CCccceEEEECCcC
Q 015903 180 PQPGYGFDYTLDEYVASLESFVNEI-------ANDKVSLVVQGYFSPVVVKYASK----H------KDKLKDLILLNPPL 242 (398)
Q Consensus 180 ~~~~~~~~~~~~~~~~dl~~~l~~l-------~~~~v~lvG~S~Gg~ia~~~a~~----~------p~~v~~lvl~~~~~ 242 (398)
..... ...+.++.++++..+|+.+ ...+++|.|-|+||..+-.+|.. . +-.++++++.++..
T Consensus 103 ~~~~~-~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 103 NDPSD-YVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp SSGGG-GS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred ccccc-ccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 55421 2357888888888888764 34589999999999987777653 2 23588999999876
Q ss_pred ccc
Q 015903 243 TAK 245 (398)
Q Consensus 243 ~~~ 245 (398)
.+.
T Consensus 182 dp~ 184 (415)
T PF00450_consen 182 DPR 184 (415)
T ss_dssp BHH
T ss_pred ccc
Confidence 553
No 148
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.56 E-value=4.1e-07 Score=84.83 Aligned_cols=154 Identities=14% Similarity=0.155 Sum_probs=101.7
Q ss_pred CCEEEEecCCC----CCcc--chhhhhHhhhcCCeEEEEcCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHH------
Q 015903 137 NHTVLLIHGFP----SQAY--SYRKVLPVLSKNYHAIAFDWLGF-GFSEKPQPGYGFDYTLDEYVASLESFVNE------ 203 (398)
Q Consensus 137 ~p~vvllHG~~----~~~~--~~~~~~~~L~~g~~Vi~~D~rG~-G~S~~~~~~~~~~~~~~~~~~dl~~~l~~------ 203 (398)
.|.++++||.+ .+.+ .|...+....+-..|-++|++.- |+ .++...++.+..+.+.
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-----------~nI~h~ae~~vSf~r~kvlei~ 244 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-----------ANIKHAAEYSVSFDRYKVLEIT 244 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-----------cchHHHHHHHHHHhhhhhhhhh
Confidence 57899999998 1222 23444444444566677777732 32 2344445555444442
Q ss_pred --hCCCcEEEEEeCcChHHHHHHHHhCC-CccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchhhhhhhcc
Q 015903 204 --IANDKVSLVVQGYFSPVVVKYASKHK-DKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRASDKALTSC 280 (398)
Q Consensus 204 --l~~~~v~lvG~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (398)
+...+|+|+|.|||+.++.+.+..+- ..|+++|+++-++......
T Consensus 245 gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp-------------------------------- 292 (784)
T KOG3253|consen 245 GEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP-------------------------------- 292 (784)
T ss_pred ccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcc--------------------------------
Confidence 23458999999999888887776543 2489999887654332100
Q ss_pred CCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCchhHHHHHHh
Q 015903 281 GPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNNDGVEDFCND 360 (398)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~ 360 (398)
.... .+.+. .++.|+|||.|.+|..+++...++++++
T Consensus 293 --rgir--------------------------------DE~Ll---------dmk~PVLFV~Gsnd~mcspn~ME~vreK 329 (784)
T KOG3253|consen 293 --RGIR--------------------------------DEALL---------DMKQPVLFVIGSNDHMCSPNSMEEVREK 329 (784)
T ss_pred --cCCc--------------------------------chhhH---------hcCCceEEEecCCcccCCHHHHHHHHHH
Confidence 0000 00111 2289999999999999999999999999
Q ss_pred c--CCcEEEcCCCCCccc
Q 015903 361 S--NHELIELPMAGHHVQ 376 (398)
Q Consensus 361 ~--~~~~~~i~~~gH~~~ 376 (398)
+ ..+++++.+++|.+-
T Consensus 330 MqA~~elhVI~~adhsma 347 (784)
T KOG3253|consen 330 MQAEVELHVIGGADHSMA 347 (784)
T ss_pred hhccceEEEecCCCcccc
Confidence 9 889999999999764
No 149
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.54 E-value=7.4e-08 Score=87.17 Aligned_cols=106 Identities=20% Similarity=0.287 Sum_probs=63.4
Q ss_pred CCCCEEEEecCCCCCc--cch-hhhhH-hhhc---CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---
Q 015903 135 ADNHTVLLIHGFPSQA--YSY-RKVLP-VLSK---NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI--- 204 (398)
Q Consensus 135 ~~~p~vvllHG~~~~~--~~~-~~~~~-~L~~---g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l--- 204 (398)
.++|++|++|||.++. ..| ..+.. .|.. +++||++|+....... ... .......+.+.|..+|+.|
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~--Y~~--a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNN--YPQ--AVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccc--ccc--hhhhHHHHHHHHHHHHHHHHhh
Confidence 4579999999998766 455 44444 3443 7999999996332210 000 0011233333444444332
Q ss_pred ---CCCcEEEEEeCcChHHHHHHHHhCCC--ccceEEEECCcCcc
Q 015903 205 ---ANDKVSLVVQGYFSPVVVKYASKHKD--KLKDLILLNPPLTA 244 (398)
Q Consensus 205 ---~~~~v~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 244 (398)
..++++|||||+||.+|-..+..... +|..++.++|..+.
T Consensus 145 ~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 145 FGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp H---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred cCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 45789999999999999999988777 89999999997654
No 150
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.53 E-value=1.3e-06 Score=82.66 Aligned_cols=117 Identities=15% Similarity=0.118 Sum_probs=80.0
Q ss_pred CCeEEEEE---eccCCCCCEEEEecCCCCCccc---h--hhhhH---hhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCH
Q 015903 123 EIFRWFCV---ESGNADNHTVLLIHGFPSQAYS---Y--RKVLP---VLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTL 190 (398)
Q Consensus 123 ~g~~l~~~---~~g~~~~p~vvllHG~~~~~~~---~--~~~~~---~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 190 (398)
||++|+.. +.+.+..|+++..+-++-.... + ....+ .++. ||.|+..|.||.|.|.+...... +
T Consensus 28 DGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~---~- 103 (563)
T COG2936 28 DGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPES---S- 103 (563)
T ss_pred CCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceec---c-
Confidence 67777644 4444456888888844433331 1 12223 3444 99999999999999998776422 2
Q ss_pred HHHHHH---HHHHHHHh--CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcc
Q 015903 191 DEYVAS---LESFVNEI--ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 191 ~~~~~d---l~~~l~~l--~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 244 (398)
+-++| +.+++... ...+|..+|.|++|...+.+|+..|..+++++...+..+.
T Consensus 104 -~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 104 -REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred -ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 22333 33333332 2458999999999999999999999999999988886653
No 151
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.51 E-value=5.8e-07 Score=78.95 Aligned_cols=86 Identities=15% Similarity=0.188 Sum_probs=66.1
Q ss_pred CCCEEEEecCCCCCccch------hhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--
Q 015903 136 DNHTVLLIHGFPSQAYSY------RKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIA-- 205 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~------~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-- 205 (398)
+...||+.-|.++..+.. +.....+++ +.+|+++++||.|.|.+.. +.++++.|-.+.++++.
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-------s~~dLv~~~~a~v~yL~d~ 208 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-------SRKDLVKDYQACVRYLRDE 208 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-------CHHHHHHHHHHHHHHHHhc
Confidence 457999999998766651 223444444 9999999999999997755 36888888888887762
Q ss_pred -----CCcEEEEEeCcChHHHHHHHHhC
Q 015903 206 -----NDKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 206 -----~~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
.+++++.|||+||.++...+.++
T Consensus 209 ~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 209 EQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ccCCChheEEEeeccccHHHHHHHHHhc
Confidence 36799999999999998866554
No 152
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.49 E-value=4.4e-06 Score=78.28 Aligned_cols=104 Identities=11% Similarity=0.010 Sum_probs=62.8
Q ss_pred CCCEEEEecCCCCCcc-chhhhhHhh-hcC----CeEEEEcCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----
Q 015903 136 DNHTVLLIHGFPSQAY-SYRKVLPVL-SKN----YHAIAFDWLGF-GFSEKPQPGYGFDYTLDEYVASLESFVNEI---- 204 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~-~~~~~~~~L-~~g----~~Vi~~D~rG~-G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---- 204 (398)
..|+|+++||...... .....+..| ++| .-|+.+|..+. .++..... ...-.+.++++|.-.+++.
T Consensus 208 ~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~---~~~f~~~l~~eLlP~I~~~y~~~ 284 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPC---NADFWLAVQQELLPQVRAIAPFS 284 (411)
T ss_pred CCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCc---hHHHHHHHHHHHHHHHHHhCCCC
Confidence 4689999999642111 112233333 333 34567775321 11111110 0111333445665555553
Q ss_pred -CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcC
Q 015903 205 -ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPL 242 (398)
Q Consensus 205 -~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 242 (398)
+.++.+|+|+||||..|+.++.++|+++.+++.+++.+
T Consensus 285 ~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 285 DDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred CCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 34578899999999999999999999999999999853
No 153
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.41 E-value=3.9e-05 Score=64.49 Aligned_cols=106 Identities=19% Similarity=0.138 Sum_probs=75.2
Q ss_pred CEEEEecCCCCCccchhhhhHhhhcCC------eEEEEcCCCC----CCCCCCCCC-------CCCCCCHHHHHHHHHHH
Q 015903 138 HTVLLIHGFPSQAYSYRKVLPVLSKNY------HAIAFDWLGF----GFSEKPQPG-------YGFDYTLDEYVASLESF 200 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~~~~~L~~g~------~Vi~~D~rG~----G~S~~~~~~-------~~~~~~~~~~~~dl~~~ 200 (398)
-|.+|+||.+|+......++..|.+.+ -++.+|--|. |.-++.... .....+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 478999999999999999887776633 3555666553 211111100 11234566677777777
Q ss_pred HHHh----CCCcEEEEEeCcChHHHHHHHHhCCC-----ccceEEEECCcCc
Q 015903 201 VNEI----ANDKVSLVVQGYFSPVVVKYASKHKD-----KLKDLILLNPPLT 243 (398)
Q Consensus 201 l~~l----~~~~v~lvG~S~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~ 243 (398)
+..| +++++.++||||||.-...|+..+.. .++.+|.+++++.
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 7665 67899999999999999999987632 4889999998775
No 154
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.40 E-value=2.7e-06 Score=73.41 Aligned_cols=106 Identities=14% Similarity=0.230 Sum_probs=67.4
Q ss_pred CCCEEEEecCCCCCccch-hhhh---HhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCC
Q 015903 136 DNHTVLLIHGFPSQAYSY-RKVL---PVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI----AND 207 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~-~~~~---~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~ 207 (398)
++..+||+||+..+.+.- .... ..+.-...++.+.||..|.-...... ..+...-...+..+++.+ +.+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d---~~~a~~s~~~l~~~L~~L~~~~~~~ 93 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYD---RESARFSGPALARFLRDLARAPGIK 93 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhh---hhhHHHHHHHHHHHHHHHHhccCCc
Confidence 467999999998775542 2222 22222338999999987753221110 122333344455555544 567
Q ss_pred cEEEEEeCcChHHHHHHHHh----CC-----CccceEEEECCcCcc
Q 015903 208 KVSLVVQGYFSPVVVKYASK----HK-----DKLKDLILLNPPLTA 244 (398)
Q Consensus 208 ~v~lvG~S~Gg~ia~~~a~~----~p-----~~v~~lvl~~~~~~~ 244 (398)
+|+|++||||+.+.+..... .+ .++..+|+++|-.+.
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 99999999999999887543 11 268899999986543
No 155
>COG3150 Predicted esterase [General function prediction only]
Probab=98.40 E-value=2.1e-05 Score=61.65 Aligned_cols=90 Identities=18% Similarity=0.256 Sum_probs=65.1
Q ss_pred EEEecCCCCCccchhhhh--HhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcC
Q 015903 140 VLLIHGFPSQAYSYRKVL--PVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYF 217 (398)
Q Consensus 140 vvllHG~~~~~~~~~~~~--~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~G 217 (398)
||++||+-++....+... +.+.... |-.+.+.... .......++.++.++..++.+...|+|-|+|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~-------~~i~y~~p~l-----~h~p~~a~~ele~~i~~~~~~~p~ivGssLG 69 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDV-------RDIEYSTPHL-----PHDPQQALKELEKAVQELGDESPLIVGSSLG 69 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccc-------cceeeecCCC-----CCCHHHHHHHHHHHHHHcCCCCceEEeecch
Confidence 899999999888875543 4554422 2223333222 2468899999999999998888999999999
Q ss_pred hHHHHHHHHhCCCccceEEEECCcCcc
Q 015903 218 SPVVVKYASKHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 218 g~ia~~~a~~~p~~v~~lvl~~~~~~~ 244 (398)
|+.|.+++.++. +++ |+++|...+
T Consensus 70 GY~At~l~~~~G--ira-v~~NPav~P 93 (191)
T COG3150 70 GYYATWLGFLCG--IRA-VVFNPAVRP 93 (191)
T ss_pred HHHHHHHHHHhC--Chh-hhcCCCcCc
Confidence 999999998873 554 456775544
No 156
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.38 E-value=3e-06 Score=79.57 Aligned_cols=222 Identities=13% Similarity=0.067 Sum_probs=125.5
Q ss_pred cCCeEEEEEecc----CCCCCEEEEecCCCCCcc--chhhhh-HhhhcCCeEEEEcCCCCCCCCCCCCCCCC----CCCH
Q 015903 122 DEIFRWFCVESG----NADNHTVLLIHGFPSQAY--SYRKVL-PVLSKNYHAIAFDWLGFGFSEKPQPGYGF----DYTL 190 (398)
Q Consensus 122 ~~g~~l~~~~~g----~~~~p~vvllHG~~~~~~--~~~~~~-~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~----~~~~ 190 (398)
.||.++.|-..+ ..+.|++|+--|+..-+. .|.... ..|.+|...+..+.||=|+-...-...+. +..+
T Consensus 402 kDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vf 481 (648)
T COG1505 402 KDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVF 481 (648)
T ss_pred CCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhh
Confidence 367777765543 123677776655543222 344443 45566888888999998876543221111 2345
Q ss_pred HHHHHHHHHHHHHh--CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCC
Q 015903 191 DEYVASLESFVNEI--ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQD 268 (398)
Q Consensus 191 ~~~~~dl~~~l~~l--~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (398)
+|++.-.++++++= ..+++.+.|.|=||.+.-....++|+.+.++|+-.|..+.-. ..
T Consensus 482 dDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlR--------------------Yh 541 (648)
T COG1505 482 DDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLR--------------------YH 541 (648)
T ss_pred HHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhh--------------------hc
Confidence 55555555555441 245789999999999998888999999999988777543210 00
Q ss_pred ccchhhhhhhccCCCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccC--CCCCCEEEEeeCCC
Q 015903 269 PLRASDKALTSCGPYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDK--SWKIPTTVCWGQRD 346 (398)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~Pvlii~G~~D 346 (398)
.+..-..++..++....+++ ...+.+.++..+.+ +.=-|+||-.+.+|
T Consensus 542 ~l~aG~sW~~EYG~Pd~P~d------------------------------~~~l~~YSPy~nl~~g~kYP~~LITTs~~D 591 (648)
T COG1505 542 LLTAGSSWIAEYGNPDDPED------------------------------RAFLLAYSPYHNLKPGQKYPPTLITTSLHD 591 (648)
T ss_pred ccccchhhHhhcCCCCCHHH------------------------------HHHHHhcCchhcCCccccCCCeEEEccccc
Confidence 00000011111111111111 11222222222111 11357999999999
Q ss_pred CccCchhHHHHHHhc---CCcEEEc--CCCCCcccccChH--HHHHHHHHHHhh
Q 015903 347 RWLNNDGVEDFCNDS---NHELIEL--PMAGHHVQEDSGE--ELGKVISEIFRK 393 (398)
Q Consensus 347 ~~v~~~~~~~l~~~~---~~~~~~i--~~~gH~~~~e~p~--~~~~~i~~fl~~ 393 (398)
..|.|.++..++.++ +.....+ -++||..--+..+ +....+..||.+
T Consensus 592 DRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r 645 (648)
T COG1505 592 DRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLR 645 (648)
T ss_pred ccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHH
Confidence 999999999999988 4333333 3579987544332 334445566654
No 157
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.37 E-value=2e-05 Score=65.95 Aligned_cols=80 Identities=18% Similarity=0.272 Sum_probs=53.8
Q ss_pred CCEEEEecCCCCCccchhhhhHhhhcCCeE-EEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeC
Q 015903 137 NHTVLLIHGFPSQAYSYRKVLPVLSKNYHA-IAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQG 215 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~~~L~~g~~V-i~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S 215 (398)
...|||..|||.+...+.++. +..+++| +++|+|-.- .+. |+ .+.+++.||++|
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l~--------------~d~---~~------~~y~~i~lvAWS 65 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDLD--------------FDF---DL------SGYREIYLVAWS 65 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCcccc--------------ccc---cc------ccCceEEEEEEe
Confidence 469999999999988877653 2335554 567887321 110 11 146789999999
Q ss_pred cChHHHHHHHHhCCCccceEEEECCcCc
Q 015903 216 YFSPVVVKYASKHKDKLKDLILLNPPLT 243 (398)
Q Consensus 216 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 243 (398)
||-.+|..+.... .++..|.+++...
T Consensus 66 mGVw~A~~~l~~~--~~~~aiAINGT~~ 91 (213)
T PF04301_consen 66 MGVWAANRVLQGI--PFKRAIAINGTPY 91 (213)
T ss_pred HHHHHHHHHhccC--CcceeEEEECCCC
Confidence 9999988876544 3666667766443
No 158
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.37 E-value=2.7e-05 Score=67.99 Aligned_cols=60 Identities=10% Similarity=0.194 Sum_probs=51.7
Q ss_pred CCCCCCEEEEeeCCCCccCchhHHHHHHhc-----CCcEEEcCCCCCcccc-cChHHHHHHHHHHH
Q 015903 332 KSWKIPTTVCWGQRDRWLNNDGVEDFCNDS-----NHELIELPMAGHHVQE-DSGEELGKVISEIF 391 (398)
Q Consensus 332 ~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl 391 (398)
...++|-|+++++.|.+++.+..++..+.. +++...++++.|..++ ++|+++.+.+.+|+
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 455799999999999999999888777766 5778889999999875 69999999999985
No 159
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.33 E-value=4.5e-05 Score=69.39 Aligned_cols=36 Identities=6% Similarity=-0.253 Sum_probs=31.9
Q ss_pred cEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCc
Q 015903 208 KVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLT 243 (398)
Q Consensus 208 ~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 243 (398)
+++++|+|.||++|...|.-.|-.+++++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 789999999999999999999999999887776543
No 160
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.33 E-value=8.1e-06 Score=69.82 Aligned_cols=89 Identities=16% Similarity=0.181 Sum_probs=49.4
Q ss_pred CCEEEEecCCCCCccchhhhhHhhhc---CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CcEEE
Q 015903 137 NHTVLLIHGFPSQAYSYRKVLPVLSK---NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIAN--DKVSL 211 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~~~L~~---g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~--~~v~l 211 (398)
.-.||++||+.++...|..+...+.. .+.--.+...++........ .+.....+.+++.|.+.++.... .++.+
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~-~gI~~~g~rL~~eI~~~~~~~~~~~~~Isf 82 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTF-DGIDVCGERLAEEILEHIKDYESKIRKISF 82 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccc-hhhHHHHHHHHHHHHHhccccccccccceE
Confidence 45899999999999998777655544 22211222222211111110 00112233444555555544443 48999
Q ss_pred EEeCcChHHHHHHHH
Q 015903 212 VVQGYFSPVVVKYAS 226 (398)
Q Consensus 212 vG~S~Gg~ia~~~a~ 226 (398)
|||||||.++-.+..
T Consensus 83 IgHSLGGli~r~al~ 97 (217)
T PF05057_consen 83 IGHSLGGLIARYALG 97 (217)
T ss_pred EEecccHHHHHHHHH
Confidence 999999988765443
No 161
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.32 E-value=0.00016 Score=67.74 Aligned_cols=122 Identities=17% Similarity=0.135 Sum_probs=76.1
Q ss_pred CCeEEEEEecc----CCCCCEEEEecCCCCCccch---hhhhHh---------------hhcCCeEEEEcCC-CCCCCCC
Q 015903 123 EIFRWFCVESG----NADNHTVLLIHGFPSQAYSY---RKVLPV---------------LSKNYHAIAFDWL-GFGFSEK 179 (398)
Q Consensus 123 ~g~~l~~~~~g----~~~~p~vvllHG~~~~~~~~---~~~~~~---------------L~~g~~Vi~~D~r-G~G~S~~ 179 (398)
.+..++|.-.. +.+.|.||.+-|++|.+..- .++-+. ..+-.+++.+|.| |.|.|-.
T Consensus 55 ~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs 134 (454)
T KOG1282|consen 55 EGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYS 134 (454)
T ss_pred CCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCcccc
Confidence 36777776443 23478999999998876532 111111 1124578999988 7888854
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHH-h------CCCcEEEEEeCcChHHHHHHHHh----C-----C-CccceEEEECCcC
Q 015903 180 PQPGYGFDYTLDEYVASLESFVNE-I------ANDKVSLVVQGYFSPVVVKYASK----H-----K-DKLKDLILLNPPL 242 (398)
Q Consensus 180 ~~~~~~~~~~~~~~~~dl~~~l~~-l------~~~~v~lvG~S~Gg~ia~~~a~~----~-----p-~~v~~lvl~~~~~ 242 (398)
..... ...+-+..++|+..++.. + ...+++|.|-|++|...-.+|.. . | -.++|+++-+|..
T Consensus 135 ~~~~~-~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 135 NTSSD-YKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred CCCCc-CcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCccc
Confidence 43321 112345555665555543 2 34689999999999777776653 2 1 2578888888866
Q ss_pred ccc
Q 015903 243 TAK 245 (398)
Q Consensus 243 ~~~ 245 (398)
+..
T Consensus 214 d~~ 216 (454)
T KOG1282|consen 214 DPE 216 (454)
T ss_pred Ccc
Confidence 544
No 162
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.31 E-value=2.5e-06 Score=77.90 Aligned_cols=102 Identities=14% Similarity=0.183 Sum_probs=82.7
Q ss_pred CCEEEEecCCCCCccchhhhhHhhhc-CCe---EEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEE
Q 015903 137 NHTVLLIHGFPSQAYSYRKVLPVLSK-NYH---AIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLV 212 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~~~L~~-g~~---Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lv 212 (398)
.-++|++||++.+...|..+...+.. ++. ++.+++++.. ...+. ....+++...+.+++...+.+++.++
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~-----~~~~~ql~~~V~~~l~~~ga~~v~Li 132 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGD-GTYSL-----AVRGEQLFAYVDEVLAKTGAKKVNLI 132 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccC-CCccc-----cccHHHHHHHHHHHHhhcCCCceEEE
Confidence 34999999998888888888877777 776 8899888661 11111 34578888888888888899999999
Q ss_pred EeCcChHHHHHHHHhCC--CccceEEEECCcCcc
Q 015903 213 VQGYFSPVVVKYASKHK--DKLKDLILLNPPLTA 244 (398)
Q Consensus 213 G~S~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~ 244 (398)
|||+||.++..++...+ .+|+.++.++++-..
T Consensus 133 gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 133 GHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred eecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 99999999999998887 799999999986443
No 163
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.31 E-value=2.9e-05 Score=70.44 Aligned_cols=106 Identities=15% Similarity=0.189 Sum_probs=72.3
Q ss_pred CCCEEEEecCCCCCccchh-------hhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCc
Q 015903 136 DNHTVLLIHGFPSQAYSYR-------KVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDK 208 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~~-------~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~ 208 (398)
+.|.||++||+|-.-.... .+...|. ...+++.|+--...-.. ...+...+.+.++-...+++..+.++
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~---~~~yPtQL~qlv~~Y~~Lv~~~G~~n 196 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEH---GHKYPTQLRQLVATYDYLVESEGNKN 196 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccC---CCcCchHHHHHHHHHHHHHhccCCCe
Confidence 4699999999985443322 2223333 66899999874430000 00123457777777888887778899
Q ss_pred EEEEEeCcChHHHHHHHHhC--C---CccceEEEECCcCccc
Q 015903 209 VSLVVQGYFSPVVVKYASKH--K---DKLKDLILLNPPLTAK 245 (398)
Q Consensus 209 v~lvG~S~Gg~ia~~~a~~~--p---~~v~~lvl~~~~~~~~ 245 (398)
++|+|-|.||.+++.+.... + ..-+++|+++|.....
T Consensus 197 I~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 197 IILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 99999999999999876532 1 1367999999987665
No 164
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.29 E-value=2.1e-05 Score=64.63 Aligned_cols=101 Identities=20% Similarity=0.288 Sum_probs=74.2
Q ss_pred CEEEEecCCCCCccc--h-hhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----CcE
Q 015903 138 HTVLLIHGFPSQAYS--Y-RKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIAN----DKV 209 (398)
Q Consensus 138 p~vvllHG~~~~~~~--~-~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~----~~v 209 (398)
..|||+-|++..--. | ..+...|.+ ++.++.+-++.+-. .+| ..++.+-++|+..++++++. ..|
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~------G~G-t~slk~D~edl~~l~~Hi~~~~fSt~v 109 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYN------GYG-TFSLKDDVEDLKCLLEHIQLCGFSTDV 109 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccc------ccc-cccccccHHHHHHHHHHhhccCcccce
Confidence 578999998865432 3 556677777 99999998873210 001 34577778899999998753 379
Q ss_pred EEEEeCcChHHHHHHHHh--CCCccceEEEECCcCccc
Q 015903 210 SLVVQGYFSPVVVKYASK--HKDKLKDLILLNPPLTAK 245 (398)
Q Consensus 210 ~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~ 245 (398)
+|+|||-|+.=.+.|..+ .|..+.+.|+.+|+.+..
T Consensus 110 VL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 110 VLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 999999999998888843 356789999999987654
No 165
>PLN02606 palmitoyl-protein thioesterase
Probab=98.24 E-value=0.00012 Score=64.11 Aligned_cols=99 Identities=13% Similarity=0.212 Sum_probs=65.4
Q ss_pred CCEEEEecCCC--CCccchhhhhHhhh--cCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCCcE
Q 015903 137 NHTVLLIHGFP--SQAYSYRKVLPVLS--KNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNE---IANDKV 209 (398)
Q Consensus 137 ~p~vvllHG~~--~~~~~~~~~~~~L~--~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~---l~~~~v 209 (398)
..|||+.||+| .+...+..+.+.+. .++.+..+. .|-+... ++-....+.++.+.+.+.. +. +-+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~------s~~~~~~~Qv~~vce~l~~~~~L~-~G~ 97 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQD------SLFMPLRQQASIACEKIKQMKELS-EGY 97 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccc------ccccCHHHHHHHHHHHHhcchhhc-Cce
Confidence 46899999999 45556777777776 255554444 2322211 1112344555544444433 22 358
Q ss_pred EEEEeCcChHHHHHHHHhCCC--ccceEEEECCcCc
Q 015903 210 SLVVQGYFSPVVVKYASKHKD--KLKDLILLNPPLT 243 (398)
Q Consensus 210 ~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 243 (398)
.++|+|.||.++=.++.+.|+ .|+.+|.++++-.
T Consensus 98 naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999999887 5999999997643
No 166
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.11 E-value=0.00013 Score=69.24 Aligned_cols=183 Identities=13% Similarity=0.032 Sum_probs=109.5
Q ss_pred ccCcCceeeecc--cCCCceeeeccccCCCceeecCCccCCCCCCchhhhhccceEEEeecCCCCcccCCCCcccccccc
Q 015903 41 CKNRRKCLRISC--TYEDDYLIDAPVSEGDGFSFFGGKYSDGSSPADEWFKQGKIVKAVTVSGSGETAKDPIFGLDLGSA 118 (398)
Q Consensus 41 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~~~ 118 (398)
.+.+......+| +|+..|-+|-.....+. ++.+.......|++... -.+...+... -||..+-
T Consensus 391 ~~~~~~~f~~sS~l~P~~iy~yDl~~~~~e~------~vf~e~~~~lpg~~~s~-y~~~r~~~~S------kDGt~VP-- 455 (712)
T KOG2237|consen 391 FKSSTIRFQFSSFLTPGSIYDYDLANGKPEP------SVFREITVVLPGFDASD-YVVERIEVSS------KDGTKVP-- 455 (712)
T ss_pred CCCceEEEEEeccCCCCeEEEeeccCCCCCC------cceeeeccccCcccccc-eEEEEEEEec------CCCCccc--
Confidence 344556666777 88888888766554422 22233333334444331 1122222222 4554331
Q ss_pred ccccCCeEEEEEeccC--CCCCEEEEecCCCCCc-c-chhhhhHhh-hcCCeEEEEcCCCCCCCCCCCCC----CCCCCC
Q 015903 119 SQADEIFRWFCVESGN--ADNHTVLLIHGFPSQA-Y-SYRKVLPVL-SKNYHAIAFDWLGFGFSEKPQPG----YGFDYT 189 (398)
Q Consensus 119 ~~~~~g~~l~~~~~g~--~~~p~vvllHG~~~~~-~-~~~~~~~~L-~~g~~Vi~~D~rG~G~S~~~~~~----~~~~~~ 189 (398)
+.|.|...-. ++.|.+|..+|.-+-+ . .|..--..| ..|+-....|.||-|.-...-.. .....+
T Consensus 456 ------M~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~ 529 (712)
T KOG2237|consen 456 ------MFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNS 529 (712)
T ss_pred ------eEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhccc
Confidence 2445543322 3467777777764322 1 343322223 34888888899998765432111 112467
Q ss_pred HHHHHHHHHHHHHH--hCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcc
Q 015903 190 LDEYVASLESFVNE--IANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 190 ~~~~~~dl~~~l~~--l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 244 (398)
++|++...+.+++. ...++.++.|.|.||.++..++.++|+.+.++|+-.|..+.
T Consensus 530 f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDv 586 (712)
T KOG2237|consen 530 FDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDV 586 (712)
T ss_pred HHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceeh
Confidence 88888888888875 35678999999999999999999999999999998886643
No 167
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.10 E-value=0.00059 Score=61.56 Aligned_cols=117 Identities=9% Similarity=0.075 Sum_probs=71.9
Q ss_pred EEEEeccC-CCCCEEEEecCCCCCcc---chhhhhHhhhc-CCeEEEEcCCCC--CCCCC----------CCCCCCCC--
Q 015903 127 WFCVESGN-ADNHTVLLIHGFPSQAY---SYRKVLPVLSK-NYHAIAFDWLGF--GFSEK----------PQPGYGFD-- 187 (398)
Q Consensus 127 l~~~~~g~-~~~p~vvllHG~~~~~~---~~~~~~~~L~~-g~~Vi~~D~rG~--G~S~~----------~~~~~~~~-- 187 (398)
..|.++.. ...-.||++||.+.+.. ....+-..|.+ |+..+.+.+|.- ..... ........
T Consensus 76 aL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~ 155 (310)
T PF12048_consen 76 ALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPS 155 (310)
T ss_pred EEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCC
Confidence 33444432 22348999999997764 23555677777 999999998861 10000 00000000
Q ss_pred ---------------CCHHHHHHHHHHHHHHh---CCCcEEEEEeCcChHHHHHHHHhCCC-ccceEEEECCcCc
Q 015903 188 ---------------YTLDEYVASLESFVNEI---ANDKVSLVVQGYFSPVVVKYASKHKD-KLKDLILLNPPLT 243 (398)
Q Consensus 188 ---------------~~~~~~~~dl~~~l~~l---~~~~v~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~ 243 (398)
...+.+..-|.+++..+ +..+++|+||+.|+..++.+....+. .++++|++++...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 156 DEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWP 230 (310)
T ss_pred CCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCC
Confidence 00122333344444333 45569999999999999999988764 5999999998543
No 168
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.10 E-value=1.6e-06 Score=78.02 Aligned_cols=59 Identities=20% Similarity=0.326 Sum_probs=49.7
Q ss_pred CCEEEEeeCCCCccCchhHHHHHHhc-C--CcEEEcCCCCCcccccChH---HHHHHHHHHHhhc
Q 015903 336 IPTTVCWGQRDRWLNNDGVEDFCNDS-N--HELIELPMAGHHVQEDSGE---ELGKVISEIFRKR 394 (398)
Q Consensus 336 ~Pvlii~G~~D~~v~~~~~~~l~~~~-~--~~~~~i~~~gH~~~~e~p~---~~~~~i~~fl~~~ 394 (398)
+|+|+++|++|..+|...+..+.+.. . .+...+++++|........ +..+.+.+|+.++
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999998888 4 5788889999988654333 7888999998765
No 169
>PLN02209 serine carboxypeptidase
Probab=98.09 E-value=0.0004 Score=65.54 Aligned_cols=60 Identities=12% Similarity=0.119 Sum_probs=49.0
Q ss_pred CCCEEEEeeCCCCccCchhHHHHHHhc-------------------------C-CcEEEcCCCCCcccccChHHHHHHHH
Q 015903 335 KIPTTVCWGQRDRWLNNDGVEDFCNDS-------------------------N-HELIELPMAGHHVQEDSGEELGKVIS 388 (398)
Q Consensus 335 ~~Pvlii~G~~D~~v~~~~~~~l~~~~-------------------------~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 388 (398)
.++||+..|+.|-+++.-..+.+.+.+ + .+++++.++||++. .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 589999999999999987766666544 2 45667788999995 69999999999
Q ss_pred HHHhhcc
Q 015903 389 EIFRKRR 395 (398)
Q Consensus 389 ~fl~~~~ 395 (398)
+|+..+.
T Consensus 430 ~fi~~~~ 436 (437)
T PLN02209 430 RWISGQP 436 (437)
T ss_pred HHHcCCC
Confidence 9997653
No 170
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.07 E-value=0.00042 Score=60.89 Aligned_cols=100 Identities=12% Similarity=0.125 Sum_probs=66.1
Q ss_pred CCEEEEecCCCCCcc--chhhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCcEE
Q 015903 137 NHTVLLIHGFPSQAY--SYRKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIA--NDKVS 210 (398)
Q Consensus 137 ~p~vvllHG~~~~~~--~~~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~--~~~v~ 210 (398)
..|+|+.||+|.+.. ....+.+.+.+ |..+.++.. |.+.. .++-....+.++.+.+.+.... .+-+.
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~----~s~~~~~~~Qve~vce~l~~~~~l~~G~n 97 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVG----DSWLMPLTQQAEIACEKVKQMKELSQGYN 97 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCcc----ccceeCHHHHHHHHHHHHhhchhhhCcEE
Confidence 458999999997655 34445555543 677776654 33311 1123345555555555444311 13599
Q ss_pred EEEeCcChHHHHHHHHhCCC--ccceEEEECCcCc
Q 015903 211 LVVQGYFSPVVVKYASKHKD--KLKDLILLNPPLT 243 (398)
Q Consensus 211 lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 243 (398)
++|+|.||.++=.++.+.|+ .|+.+|.++++-.
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 99999999999999999987 5999999997543
No 171
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.04 E-value=4e-05 Score=73.12 Aligned_cols=108 Identities=16% Similarity=0.108 Sum_probs=70.9
Q ss_pred CCCEEEEecCCCCCccc-h--hhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHHhC--
Q 015903 136 DNHTVLLIHGFPSQAYS-Y--RKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYG---FDYTLDEYVASLESFVNEIA-- 205 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~-~--~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~---~~~~~~~~~~dl~~~l~~l~-- 205 (398)
.+|.+|++ |+-+.... + ..++..|++ |-.|+++++|-+|.|.+...... .-.+.++..+|+..+++++.
T Consensus 28 ~gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 35555555 44443332 2 335566766 99999999999999976433110 12588999999999998763
Q ss_pred -----CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcc
Q 015903 206 -----NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 206 -----~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 244 (398)
..|++++|.|+||.+|..+-.++|+.|.+.+.-+++...
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 237999999999999999999999999999999887654
No 172
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.04 E-value=0.00025 Score=66.91 Aligned_cols=60 Identities=10% Similarity=0.075 Sum_probs=49.0
Q ss_pred CCCEEEEeeCCCCccCchhHHHHHHhc-------------------------C-CcEEEcCCCCCcccccChHHHHHHHH
Q 015903 335 KIPTTVCWGQRDRWLNNDGVEDFCNDS-------------------------N-HELIELPMAGHHVQEDSGEELGKVIS 388 (398)
Q Consensus 335 ~~Pvlii~G~~D~~v~~~~~~~l~~~~-------------------------~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 388 (398)
.++||+..|+.|.+++.-..+.+.+.+ + .+++++-++||++. .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 589999999999999987777666544 1 34667788999996 69999999999
Q ss_pred HHHhhcc
Q 015903 389 EIFRKRR 395 (398)
Q Consensus 389 ~fl~~~~ 395 (398)
.|+..+.
T Consensus 426 ~Fi~~~~ 432 (433)
T PLN03016 426 RWISGQP 432 (433)
T ss_pred HHHcCCC
Confidence 9998654
No 173
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.03 E-value=1.6e-05 Score=69.86 Aligned_cols=52 Identities=13% Similarity=0.162 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHh-C--CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcc
Q 015903 193 YVASLESFVNEI-A--NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 193 ~~~dl~~~l~~l-~--~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 244 (398)
+.++|...++.. . .++..|+|+||||+.|+.++.++|+.+.+++.++|.+..
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 445566555543 2 223789999999999999999999999999999986543
No 174
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.02 E-value=1.1e-05 Score=65.69 Aligned_cols=109 Identities=15% Similarity=0.158 Sum_probs=71.3
Q ss_pred CCEEEEecCCCCCccch--hhhhHhhhc--CCeEEEEcC--CCC---CCCCCCCC-------------CCCCCCCHHH-H
Q 015903 137 NHTVLLIHGFPSQAYSY--RKVLPVLSK--NYHAIAFDW--LGF---GFSEKPQP-------------GYGFDYTLDE-Y 193 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~--~~~~~~L~~--g~~Vi~~D~--rG~---G~S~~~~~-------------~~~~~~~~~~-~ 193 (398)
-|++.++-|+..+.+.| ..-.+..+. |+.|+.+|- ||. |.++...- ++...|.+-+ +
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 48999999999888877 223333333 899999984 444 22221111 1111122222 2
Q ss_pred HHHHHHHHHH----hCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCccc
Q 015903 194 VASLESFVNE----IANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAK 245 (398)
Q Consensus 194 ~~dl~~~l~~----l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 245 (398)
.+.+.++++. ++..++.|.||||||.=|+..+.+.|.+.+++-..+|..++.
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPI 179 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcc
Confidence 3444444442 234578999999999999999999999999999888877654
No 175
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.98 E-value=0.00011 Score=66.97 Aligned_cols=155 Identities=10% Similarity=0.155 Sum_probs=91.9
Q ss_pred HHHHHHHh---CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcccCCCCchhHHHhHHhhhhhhccCCccchh
Q 015903 197 LESFVNEI---ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAKHANLPSTLSIFSNFLLGEIFSQDPLRAS 273 (398)
Q Consensus 197 l~~~l~~l---~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (398)
+.++++.. .++++++.|.|==|..++..|+ -.+||++++-+.-..... ...+.
T Consensus 159 vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~----~~~l~------------------- 214 (367)
T PF10142_consen 159 VQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNM----KANLE------------------- 214 (367)
T ss_pred HHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCc----HHHHH-------------------
Confidence 34444444 5789999999999999999998 456899888665432111 11111
Q ss_pred hhhhhccC-CCCCChhhhhhhhcccccCCCchhHHHHHHHhhhhhHHHHHHHHHHhhccCCCCCCEEEEeeCCCCccCch
Q 015903 274 DKALTSCG-PYQMKEDDAMVYRSPYLSSGSSGFALTAISKGMKKQLKQYVEEMRTILMDKSWKIPTTVCWGQRDRWLNND 352 (398)
Q Consensus 274 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~ 352 (398)
.....++ .+... ....+.......-. .........-+.+....+++++|.++|.|..|++..++
T Consensus 215 -h~y~~yG~~ws~a--~~dY~~~gi~~~l~------------tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD 279 (367)
T PF10142_consen 215 -HQYRSYGGNWSFA--FQDYYNEGITQQLD------------TPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPD 279 (367)
T ss_pred -HHHHHhCCCCccc--hhhhhHhCchhhcC------------CHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccC
Confidence 1111111 11110 11111111100000 00111111112222222355999999999999999999
Q ss_pred hHHHHHHhc--CCcEEEcCCCCCcccccChHHHHHHHHHHHhh
Q 015903 353 GVEDFCNDS--NHELIELPMAGHHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 353 ~~~~l~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 393 (398)
.+..+...+ ...+..+|+++|..-. ..+.+.|..|+..
T Consensus 280 ~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 280 SSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred chHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHH
Confidence 999999999 7788899999998764 6667777777764
No 176
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.92 E-value=3.2e-05 Score=57.43 Aligned_cols=61 Identities=18% Similarity=0.232 Sum_probs=54.7
Q ss_pred CCCEEEEeeCCCCccCchhHHHHHHhc-CCcEEEcCCCCCcccccChHHHHHHHHHHHhhcc
Q 015903 335 KIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELIELPMAGHHVQEDSGEELGKVISEIFRKRR 395 (398)
Q Consensus 335 ~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 395 (398)
..|+|++.++.|+..|.+.++.+.+.+ +.+++++++.||..+...-.-+.+.+.+||..-.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~ 95 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGT 95 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcCC
Confidence 689999999999999999999999999 8999999999999886555778889999997543
No 177
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.91 E-value=0.0011 Score=63.58 Aligned_cols=119 Identities=13% Similarity=0.090 Sum_probs=80.3
Q ss_pred EEEEEec--cCCCCCEEEEecCCCCCcc--chh-hhhHhhhcCCeEEEEcCCCCCCCCCCCCC----CCCCCCHHHHHHH
Q 015903 126 RWFCVES--GNADNHTVLLIHGFPSQAY--SYR-KVLPVLSKNYHAIAFDWLGFGFSEKPQPG----YGFDYTLDEYVAS 196 (398)
Q Consensus 126 ~l~~~~~--g~~~~p~vvllHG~~~~~~--~~~-~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~----~~~~~~~~~~~~d 196 (398)
.+.|+.. -++++|++|.-=|.-+.+. .|. ..+..|.+|+---..--||=|.-...--. .....++.|+++.
T Consensus 435 SLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~ 514 (682)
T COG1770 435 SLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAA 514 (682)
T ss_pred EEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHH
Confidence 5666643 2344677777766543322 233 33345555776666677776544321100 0124678999988
Q ss_pred HHHHHHHh--CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcc
Q 015903 197 LESFVNEI--ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 197 l~~~l~~l--~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 244 (398)
.+.+++.- ..++++++|.|.||++.-..+...|+.++++|+-.|..+.
T Consensus 515 a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 515 ARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred HHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 88888762 3458999999999999999999999999999999997654
No 178
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.90 E-value=5.4e-05 Score=67.30 Aligned_cols=110 Identities=13% Similarity=0.226 Sum_probs=65.7
Q ss_pred CCCCEEEEecCCCCCccc-hhhhhHhhh---cCCeEEEEcCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHhCCCcE
Q 015903 135 ADNHTVLLIHGFPSQAYS-YRKVLPVLS---KNYHAIAFDWLGFGFSEKPQP-GYGFDYTLDEYVASLESFVNEIANDKV 209 (398)
Q Consensus 135 ~~~p~vvllHG~~~~~~~-~~~~~~~L~---~g~~Vi~~D~rG~G~S~~~~~-~~~~~~~~~~~~~dl~~~l~~l~~~~v 209 (398)
..+..+||+||+.-+-.. -...++... .....+.+.||-.|.--.... .....++...+..-|..+.+....++|
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 346799999999755432 123333333 367788999996654221111 101123333333333333333456789
Q ss_pred EEEEeCcChHHHHHHHHhC--------CCccceEEEECCcCcc
Q 015903 210 SLVVQGYFSPVVVKYASKH--------KDKLKDLILLNPPLTA 244 (398)
Q Consensus 210 ~lvG~S~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~~~ 244 (398)
+|++||||.++++....+- +.+|+-+|+.+|-.+.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 9999999999998876541 3468888888885543
No 179
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.87 E-value=0.00091 Score=56.71 Aligned_cols=57 Identities=16% Similarity=0.157 Sum_probs=48.8
Q ss_pred EEEEeeCCCCccCchhHHHHHHhc-CCcEEEcCCCCCcc-cccChHHHHHHHHHHHhhcc
Q 015903 338 TTVCWGQRDRWLNNDGVEDFCNDS-NHELIELPMAGHHV-QEDSGEELGKVISEIFRKRR 395 (398)
Q Consensus 338 vlii~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~~ 395 (398)
+.++.+++|..+|......+.+.. ++++..++ +||.. ++-+.+++...|.+-|++..
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 467889999999998888888888 99999999 59976 67788999999999998764
No 180
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.84 E-value=7.1e-05 Score=72.81 Aligned_cols=105 Identities=12% Similarity=0.060 Sum_probs=63.5
Q ss_pred CCCCEEEEecCCCC---CccchhhhhHhhhc--C-CeEEEEcCC-CC---CCCCCCCCCCCCCCCHHHHHHH---HHHHH
Q 015903 135 ADNHTVLLIHGFPS---QAYSYRKVLPVLSK--N-YHAIAFDWL-GF---GFSEKPQPGYGFDYTLDEYVAS---LESFV 201 (398)
Q Consensus 135 ~~~p~vvllHG~~~---~~~~~~~~~~~L~~--g-~~Vi~~D~r-G~---G~S~~~~~~~~~~~~~~~~~~d---l~~~l 201 (398)
.+.|+||++||++. +...+ ....|.. + +-|+.+++| |. ..+... ... ....+.|.... +.+-+
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-~~~-~n~g~~D~~~al~wv~~~i 168 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-ELP-GNYGLKDQRLALKWVQDNI 168 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCC-CCC-cchhHHHHHHHHHHHHHHH
Confidence 34699999999863 22222 2233332 3 899999999 33 222211 100 12233444333 33334
Q ss_pred HHhC--CCcEEEEEeCcChHHHHHHHHh--CCCccceEEEECCcCc
Q 015903 202 NEIA--NDKVSLVVQGYFSPVVVKYASK--HKDKLKDLILLNPPLT 243 (398)
Q Consensus 202 ~~l~--~~~v~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 243 (398)
+..+ .++|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 169 ~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 169 AAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 4443 5689999999999999888765 2347899999887554
No 181
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.82 E-value=0.00034 Score=68.02 Aligned_cols=103 Identities=17% Similarity=0.140 Sum_probs=63.3
Q ss_pred CCCEEEEecCCCCCccchhhhhHhhh----------------c-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 015903 136 DNHTVLLIHGFPSQAYSYRKVLPVLS----------------K-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLE 198 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~~~~~~~L~----------------~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~ 198 (398)
++-||+|++|..|+...-+.++..-. . .|+.+++|+-+- -..- +..+..+.++.+.
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe--~tAm-----~G~~l~dQtEYV~ 160 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE--FTAM-----HGHILLDQTEYVN 160 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch--hhhh-----ccHhHHHHHHHHH
Confidence 46799999999988776544432211 1 567777777531 0100 1234566666555
Q ss_pred HHHHHh-----C--------CCcEEEEEeCcChHHHHHHHHh---CCCccceEEEECCcCccc
Q 015903 199 SFVNEI-----A--------NDKVSLVVQGYFSPVVVKYASK---HKDKLKDLILLNPPLTAK 245 (398)
Q Consensus 199 ~~l~~l-----~--------~~~v~lvG~S~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~~~ 245 (398)
+.|+.. + ...|+++||||||.+|...+.. .++.|.-++..+++....
T Consensus 161 dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~ 223 (973)
T KOG3724|consen 161 DAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAP 223 (973)
T ss_pred HHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCC
Confidence 555442 2 2349999999999998877653 244566677777655444
No 182
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.81 E-value=0.00054 Score=58.31 Aligned_cols=96 Identities=18% Similarity=0.114 Sum_probs=67.1
Q ss_pred CEEEEecCCCCCccc--hhhhhHhhhc--CCeEEEEcCCCCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCcE
Q 015903 138 HTVLLIHGFPSQAYS--YRKVLPVLSK--NYHAIAFDWLGFG--FSEKPQPGYGFDYTLDEYVASLESFVNEIA--NDKV 209 (398)
Q Consensus 138 p~vvllHG~~~~~~~--~~~~~~~L~~--g~~Vi~~D~rG~G--~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~--~~~v 209 (398)
-++|++||++.++.. +..+.+.+.+ |..|++.|.- -| .|. -....+.++-+.+.+.... .+-+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig-~g~~~s~--------l~pl~~Qv~~~ce~v~~m~~lsqGy 94 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIG-DGIKDSS--------LMPLWEQVDVACEKVKQMPELSQGY 94 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEec-CCcchhh--------hccHHHHHHHHHHHHhcchhccCce
Confidence 589999999987776 6777788877 9999999873 44 221 1224444444444443221 2458
Q ss_pred EEEEeCcChHHHHHHHHhCCC-ccceEEEECCcC
Q 015903 210 SLVVQGYFSPVVVKYASKHKD-KLKDLILLNPPL 242 (398)
Q Consensus 210 ~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~ 242 (398)
.++|.|.||.++-.++...++ .|+..|-++++-
T Consensus 95 nivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 95 NIVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EEEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 999999999999888877654 588888888653
No 183
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.62 E-value=0.00042 Score=62.43 Aligned_cols=84 Identities=17% Similarity=0.152 Sum_probs=59.1
Q ss_pred CCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcEEE
Q 015903 137 NHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI----ANDKVSL 211 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~l 211 (398)
...-||+.|=|+=...=+.+...|.+ |+.|+.+|-.-+=.|. .+.++.++|+..+++.. +..++.|
T Consensus 260 d~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~---------rtPe~~a~Dl~r~i~~y~~~w~~~~~~l 330 (456)
T COG3946 260 DTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSE---------RTPEQIAADLSRLIRFYARRWGAKRVLL 330 (456)
T ss_pred ceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhcc---------CCHHHHHHHHHHHHHHHHHhhCcceEEE
Confidence 34566676666533333567788888 9999999965443342 45678888888888765 5679999
Q ss_pred EEeCcChHHHHHHHHhCC
Q 015903 212 VVQGYFSPVVVKYASKHK 229 (398)
Q Consensus 212 vG~S~Gg~ia~~~a~~~p 229 (398)
+|+|+|+=+.-..-.+.|
T Consensus 331 iGySfGADvlP~~~n~L~ 348 (456)
T COG3946 331 IGYSFGADVLPFAYNRLP 348 (456)
T ss_pred EeecccchhhHHHHHhCC
Confidence 999999977655544444
No 184
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.58 E-value=0.00063 Score=63.65 Aligned_cols=82 Identities=22% Similarity=0.362 Sum_probs=57.7
Q ss_pred chhhhhHhhhc-CCeE------EEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCcEEEEEeCcChHHH
Q 015903 152 SYRKVLPVLSK-NYHA------IAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI---ANDKVSLVVQGYFSPVV 221 (398)
Q Consensus 152 ~~~~~~~~L~~-g~~V------i~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvG~S~Gg~ia 221 (398)
.|..+++.|.+ ||.. .-+|+|=.-. ..+++...+..+++.. ..++++|+||||||.++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~------------~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA------------ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVA 133 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh------------hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHH
Confidence 78999999987 6542 2368872111 1334455555555443 35799999999999999
Q ss_pred HHHHHhCCC------ccceEEEECCcCccc
Q 015903 222 VKYASKHKD------KLKDLILLNPPLTAK 245 (398)
Q Consensus 222 ~~~a~~~p~------~v~~lvl~~~~~~~~ 245 (398)
..+....+. .|+++|.++++....
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 998887643 599999999887654
No 185
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.55 E-value=0.0017 Score=59.12 Aligned_cols=59 Identities=10% Similarity=0.081 Sum_probs=47.6
Q ss_pred CCCEEEEeeCCCCccCchhHHHHHHhc-------------------------C-CcEEEcCCCCCcccccChHHHHHHHH
Q 015903 335 KIPTTVCWGQRDRWLNNDGVEDFCNDS-------------------------N-HELIELPMAGHHVQEDSGEELGKVIS 388 (398)
Q Consensus 335 ~~Pvlii~G~~D~~v~~~~~~~l~~~~-------------------------~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 388 (398)
.++|||..|+.|.+++.-..+.+.+.+ + .+++++.++||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 589999999999999986666665544 1 45566678999996 59999999999
Q ss_pred HHHhhc
Q 015903 389 EIFRKR 394 (398)
Q Consensus 389 ~fl~~~ 394 (398)
.|+...
T Consensus 312 ~fi~~~ 317 (319)
T PLN02213 312 RWISGQ 317 (319)
T ss_pred HHHcCC
Confidence 999764
No 186
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.53 E-value=0.00027 Score=65.62 Aligned_cols=120 Identities=10% Similarity=0.100 Sum_probs=71.2
Q ss_pred CCeEEEEEec--cCCCCCEEEEecCCC---CCccchhhhhHhhhc-C-CeEEEEcCC-C-CCCC---CCCC-CCCCCCCC
Q 015903 123 EIFRWFCVES--GNADNHTVLLIHGFP---SQAYSYRKVLPVLSK-N-YHAIAFDWL-G-FGFS---EKPQ-PGYGFDYT 189 (398)
Q Consensus 123 ~g~~l~~~~~--g~~~~p~vvllHG~~---~~~~~~~~~~~~L~~-g-~~Vi~~D~r-G-~G~S---~~~~-~~~~~~~~ 189 (398)
|-+.+....- ...+.|++|+|||++ ++......--..|++ | +-|+.+|+| | .|.- .-.. ........
T Consensus 78 DCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~G 157 (491)
T COG2272 78 DCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLG 157 (491)
T ss_pred cceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccccc
Confidence 4444444332 233469999999985 344333334466766 5 888999998 1 1211 1110 00000123
Q ss_pred HHHHH---HHHHHHHHHhC--CCcEEEEEeCcChHHHHHHHHhCCC---ccceEEEECCcCc
Q 015903 190 LDEYV---ASLESFVNEIA--NDKVSLVVQGYFSPVVVKYASKHKD---KLKDLILLNPPLT 243 (398)
Q Consensus 190 ~~~~~---~dl~~~l~~l~--~~~v~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~ 243 (398)
+.|++ +++.+-|+++| .++|.|+|+|.||+.++.+.+. |. .+.++|+.++...
T Consensus 158 l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 158 LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 44443 34455555665 5579999999999988877653 43 6888888888765
No 187
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.50 E-value=0.01 Score=51.35 Aligned_cols=104 Identities=13% Similarity=0.245 Sum_probs=74.8
Q ss_pred CCEEEEecCCCCCccc-hhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeC
Q 015903 137 NHTVLLIHGFPSQAYS-YRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQG 215 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~-~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S 215 (398)
.|.||++--+.++... .+...+.|-....|+..|+-.--.-.... ..++++|+++.+.+++..+|.+ +++++.+
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~----G~FdldDYIdyvie~~~~~Gp~-~hv~aVC 177 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEA----GHFDLDDYIDYVIEMINFLGPD-AHVMAVC 177 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeeccc----CCccHHHHHHHHHHHHHHhCCC-CcEEEEe
Confidence 4577777777665543 46666777778899999986432222222 2578999999999999999966 7788887
Q ss_pred cCh-----HHHHHHHHhCCCccceEEEECCcCccc
Q 015903 216 YFS-----PVVVKYASKHKDKLKDLILLNPPLTAK 245 (398)
Q Consensus 216 ~Gg-----~ia~~~a~~~p~~v~~lvl~~~~~~~~ 245 (398)
.=+ .++++.+...|..-..+++++++.+..
T Consensus 178 QP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 178 QPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred cCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 764 445555556687889999999987765
No 188
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.43 E-value=0.0011 Score=65.29 Aligned_cols=106 Identities=16% Similarity=0.123 Sum_probs=58.3
Q ss_pred CCEEEEecCCC---CCc--cchhhhhHhhhc-CCeEEEEcCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---
Q 015903 137 NHTVLLIHGFP---SQA--YSYRKVLPVLSK-NYHAIAFDWL----GFGFSEKPQPGYGFDYTLDEYVASLESFVNE--- 203 (398)
Q Consensus 137 ~p~vvllHG~~---~~~--~~~~~~~~~L~~-g~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~--- 203 (398)
.|++|+|||++ ++. ..+.. ...+.+ +.-|+.+++| |+-.+....... ..+.+.|+...|+-+-+.
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~-~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~-gN~Gl~Dq~~AL~WV~~nI~~ 202 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDG-ASLAASKDVIVVTINYRLGAFGFLSLGDLDAPS-GNYGLLDQRLALKWVQDNIAA 202 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHT-HHHHHHHTSEEEEE----HHHHH-BSSSTTSHB-STHHHHHHHHHHHHHHHHGGG
T ss_pred cceEEEeecccccCCCcccccccc-cccccCCCEEEEEecccccccccccccccccCc-hhhhhhhhHHHHHHHHhhhhh
Confidence 59999999986 233 22222 223333 9999999999 332221111000 124455554444433333
Q ss_pred hC--CCcEEEEEeCcChHHHHHHHHhC--CCccceEEEECCcCcc
Q 015903 204 IA--NDKVSLVVQGYFSPVVVKYASKH--KDKLKDLILLNPPLTA 244 (398)
Q Consensus 204 l~--~~~v~lvG~S~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~ 244 (398)
+| .++|.|+|+|.||..+....... ...++++|+.++....
T Consensus 203 FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~ 247 (535)
T PF00135_consen 203 FGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALS 247 (535)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTS
T ss_pred cccCCcceeeeeecccccccceeeecccccccccccccccccccc
Confidence 33 56899999999998887776652 3579999999985443
No 189
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.43 E-value=0.00041 Score=62.59 Aligned_cols=104 Identities=11% Similarity=0.067 Sum_probs=76.5
Q ss_pred CEEEEecCCCCCccchhh---hhHhhhc--CCeEEEEcCCCCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHhC
Q 015903 138 HTVLLIHGFPSQAYSYRK---VLPVLSK--NYHAIAFDWLGFGFSEKPQPG-------YGFDYTLDEYVASLESFVNEIA 205 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~---~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~-------~~~~~~~~~~~~dl~~~l~~l~ 205 (398)
-+|+|--|.-++.+.|.. ++-.++. +--++..+.|-+|+|.+--.. .+ -.+.++-..|...++..++
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlg-yLtseQALADfA~ll~~lK 159 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLG-YLTSEQALADFAELLTFLK 159 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhc-cccHHHHHHHHHHHHHHHh
Confidence 489999999888876633 3444444 788899999999998654322 11 1345666667777776664
Q ss_pred ------CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcC
Q 015903 206 ------NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPL 242 (398)
Q Consensus 206 ------~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 242 (398)
..+|+.+|.|+||+++..+=.++|..+.|++.-+.+.
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 2379999999999999999999999888877766544
No 190
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=97.34 E-value=3.9e-05 Score=57.36 Aligned_cols=56 Identities=20% Similarity=0.353 Sum_probs=33.9
Q ss_pred CchhhhhccceEEEeecCCCCcccCCCCccccccccccccCCeEEEEEec--cCCCCCEEEEecCCCCCccchhhh
Q 015903 83 PADEWFKQGKIVKAVTVSGSGETAKDPIFGLDLGSASQADEIFRWFCVES--GNADNHTVLLIHGFPSQAYSYRKV 156 (398)
Q Consensus 83 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~~~~~~~~g~~l~~~~~--g~~~~p~vvllHG~~~~~~~~~~~ 156 (398)
..++|.+.++..+.+|++.+. ++| +.+|+... ..++..+|||+||++++-..|..+
T Consensus 54 ~~fDWr~~E~~lN~~phf~t~------I~g------------~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 54 NEFDWRKHEARLNSFPHFKTE------IDG------------LDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp HT--HHHHHHHHTTS-EEEEE------ETT------------EEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred hcCChHHHHHHHHcCCCeeEE------Eee------------EEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 357899999999988888775 444 45554433 234567999999999998887654
No 191
>COG0627 Predicted esterase [General function prediction only]
Probab=97.32 E-value=0.0014 Score=58.81 Aligned_cols=58 Identities=17% Similarity=0.173 Sum_probs=43.9
Q ss_pred CCHHH-HHHHHHHHHHHhCC-----CcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCccc
Q 015903 188 YTLDE-YVASLESFVNEIAN-----DKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTAK 245 (398)
Q Consensus 188 ~~~~~-~~~dl~~~l~~l~~-----~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 245 (398)
+.+++ +.+.+-+.+++... ++..++||||||+=|+.+|.++|++++.+..+++.....
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 44444 34556645554322 267899999999999999999999999999999877655
No 192
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.31 E-value=0.0095 Score=55.81 Aligned_cols=109 Identities=15% Similarity=0.108 Sum_probs=73.0
Q ss_pred CCCEEEEecCCCCCccchhhhhHh--------------hh-----cCCeEEEEc-CCCCCCCCCCCCCCCCCCCHHHHHH
Q 015903 136 DNHTVLLIHGFPSQAYSYRKVLPV--------------LS-----KNYHAIAFD-WLGFGFSEKPQPGYGFDYTLDEYVA 195 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~~~~~~~--------------L~-----~g~~Vi~~D-~rG~G~S~~~~~~~~~~~~~~~~~~ 195 (398)
+.|.|+++.|++|.+..|-.+.+. +. ..-.++.+| .-|.|.|...... ...+.....+
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e--~~~d~~~~~~ 177 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDE--KKKDFEGAGK 177 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccc--cccchhccch
Confidence 478999999999988876544211 11 135799999 5588988752211 1344555566
Q ss_pred HHHHHHHHh-------C--CCcEEEEEeCcChHHHHHHHHhCCC---ccceEEEECCcCcccC
Q 015903 196 SLESFVNEI-------A--NDKVSLVVQGYFSPVVVKYASKHKD---KLKDLILLNPPLTAKH 246 (398)
Q Consensus 196 dl~~~l~~l-------~--~~~v~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~ 246 (398)
|+..+.+.+ . ..+.+|+|-|+||.-+..+|..-.+ ..+++|++.+......
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 666555443 2 3488999999999999998876544 3677777777655443
No 193
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.26 E-value=0.0036 Score=51.43 Aligned_cols=108 Identities=17% Similarity=0.209 Sum_probs=64.7
Q ss_pred CCEEEEecCCCC-Cccchhh------------hhH----hhhcCCeEEEEcCCCCCC-CCCCCCCCCCCCCHHHHHHH-H
Q 015903 137 NHTVLLIHGFPS-QAYSYRK------------VLP----VLSKNYHAIAFDWLGFGF-SEKPQPGYGFDYTLDEYVAS-L 197 (398)
Q Consensus 137 ~p~vvllHG~~~-~~~~~~~------------~~~----~L~~g~~Vi~~D~rG~G~-S~~~~~~~~~~~~~~~~~~d-l 197 (398)
...+|+|||.|- -...|.. +++ ..+.||.|++.+---+-+ ......+.-+..+..+.+.. .
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 458999999873 3344521 122 233499999987542110 01111110012233333332 2
Q ss_pred HHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCC--ccceEEEECCcCcc
Q 015903 198 ESFVNEIANDKVSLVVQGYFSPVVVKYASKHKD--KLKDLILLNPPLTA 244 (398)
Q Consensus 198 ~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 244 (398)
..++.-...+.+.++.||+||...+.+..++|+ +|.++.+.+++...
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 333444467789999999999999999999885 78888888876443
No 194
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.12 E-value=0.0086 Score=52.42 Aligned_cols=118 Identities=11% Similarity=0.056 Sum_probs=65.6
Q ss_pred eEEEEEeccC---CCCCEEEEecCCC--CCccchhhhhHhhhc----CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 015903 125 FRWFCVESGN---ADNHTVLLIHGFP--SQAYSYRKVLPVLSK----NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVA 195 (398)
Q Consensus 125 ~~l~~~~~g~---~~~p~vvllHG~~--~~~~~~~~~~~~L~~----g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 195 (398)
..+.|.+.|- .+.|++++.||-- .+...+..+-..+.+ .--++.+|.----....... ........+++
T Consensus 83 ~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~--~n~~~~~~L~~ 160 (299)
T COG2382 83 RRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELH--CNEAYWRFLAQ 160 (299)
T ss_pred eEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc--ccHHHHHHHHH
Confidence 3555665553 2358999999853 222233333333333 34556666532100000000 00111233333
Q ss_pred HHHHHHHHh-----CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcc
Q 015903 196 SLESFVNEI-----ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 196 dl~~~l~~l-----~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 244 (398)
+|.=.++.. ..+.-+|+|.|+||.+++..+..+|++|-+++..+|.+..
T Consensus 161 eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 161 ELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred HhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 333333321 1234579999999999999999999999999999886543
No 195
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.12 E-value=0.00057 Score=59.54 Aligned_cols=102 Identities=13% Similarity=0.126 Sum_probs=53.8
Q ss_pred CCEEEEecCCCCCc---cchhhhhHhhhc---CCeEEEEcCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CC
Q 015903 137 NHTVLLIHGFPSQA---YSYRKVLPVLSK---NYHAIAFDWLGFGFS-EKPQPGYGFDYTLDEYVASLESFVNEIA--ND 207 (398)
Q Consensus 137 ~p~vvllHG~~~~~---~~~~~~~~~L~~---g~~Vi~~D~rG~G~S-~~~~~~~~~~~~~~~~~~dl~~~l~~l~--~~ 207 (398)
..|||+.||+|.+. ..+..+...+.+ |..|..++.- -+.+ +.... +-..+.+.++.+.+.+.... .+
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s---~f~~v~~Qv~~vc~~l~~~p~L~~ 80 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENS---FFGNVNDQVEQVCEQLANDPELAN 80 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHH---HHSHHHHHHHHHHHHHHH-GGGTT
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhh---HHHHHHHHHHHHHHHHhhChhhhc
Confidence 45899999999654 245444444433 8888888873 2211 11000 01224455555555554421 14
Q ss_pred cEEEEEeCcChHHHHHHHHhCCC-ccceEEEECCcC
Q 015903 208 KVSLVVQGYFSPVVVKYASKHKD-KLKDLILLNPPL 242 (398)
Q Consensus 208 ~v~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~ 242 (398)
-++++|+|.||.++=.++.+.|+ .|+.+|.++++-
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 69999999999999999999875 699999999754
No 196
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.99 E-value=0.0072 Score=56.29 Aligned_cols=111 Identities=13% Similarity=0.077 Sum_probs=80.4
Q ss_pred CCCCCEEEEecCCCCCccchh----hhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHHh
Q 015903 134 NADNHTVLLIHGFPSQAYSYR----KVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYG---FDYTLDEYVASLESFVNEI 204 (398)
Q Consensus 134 ~~~~p~vvllHG~~~~~~~~~----~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~---~~~~~~~~~~dl~~~l~~l 204 (398)
.+++|..|+|-|=+.-...|- ...-.+++ |-.|+..++|-+|.|.+.....- .-.+..+...|+.++|+.+
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 345777777777664443341 12233344 89999999999998855443210 1236778888999999887
Q ss_pred CC-------CcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcc
Q 015903 205 AN-------DKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 205 ~~-------~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 244 (398)
+. .+.+.+|.|+-|.++..+=.++|+.+.+.|.-+++...
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 32 28999999999999999999999999999988876544
No 197
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.98 E-value=0.0018 Score=52.07 Aligned_cols=54 Identities=7% Similarity=0.096 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHh----CCCcEEEEEeCcChHHHHHHHHhCCC----ccceEEEECCcCc
Q 015903 190 LDEYVASLESFVNEI----ANDKVSLVVQGYFSPVVVKYASKHKD----KLKDLILLNPPLT 243 (398)
Q Consensus 190 ~~~~~~dl~~~l~~l----~~~~v~lvG~S~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~ 243 (398)
...+.+.+...++.. ...+++++|||+||.+|..++..... ....++.++++..
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 344455555555543 56789999999999999999887754 5667777777643
No 198
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.78 E-value=0.0048 Score=48.85 Aligned_cols=47 Identities=11% Similarity=0.064 Sum_probs=38.6
Q ss_pred HHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcCcc
Q 015903 198 ESFVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 198 ~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 244 (398)
..++++.-+.+.++-|.||||+.|..+..++|+.+.++|.+++.++.
T Consensus 92 rYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 92 RYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 34455544456778899999999999999999999999999997754
No 199
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.64 E-value=0.0034 Score=49.56 Aligned_cols=39 Identities=10% Similarity=0.153 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhC
Q 015903 190 LDEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 190 ~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
.+.+.+.+..+++.....++++.|||+||.+|..++...
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 345666677766666667899999999999999988763
No 200
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.52 E-value=0.11 Score=42.56 Aligned_cols=53 Identities=21% Similarity=0.293 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHhC-----CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcC
Q 015903 190 LDEYVASLESFVNEIA-----NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPL 242 (398)
Q Consensus 190 ~~~~~~dl~~~l~~l~-----~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 242 (398)
-+.-+.+|..+++.|. ..++.++|||||+.++-..+...+..+..+|+++++.
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 4555667777776653 3478999999999988888777677899999998764
No 201
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.52 E-value=0.0067 Score=58.16 Aligned_cols=90 Identities=11% Similarity=0.163 Sum_probs=55.3
Q ss_pred cchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcEEEEEeCcChHHHHHHH
Q 015903 151 YSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI----ANDKVSLVVQGYFSPVVVKYA 225 (398)
Q Consensus 151 ~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~lvG~S~Gg~ia~~~a 225 (398)
+.|..+++.|.+ ||. -.|+.|-..--+.... .....+++...+..+++.. +.++++|+||||||.+++.+.
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~--~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQ--NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCcc--chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHH
Confidence 467899999988 775 2333332211111100 0112345555566655543 357999999999999999876
Q ss_pred HhC-----------C----CccceEEEECCcCcc
Q 015903 226 SKH-----------K----DKLKDLILLNPPLTA 244 (398)
Q Consensus 226 ~~~-----------p----~~v~~lvl~~~~~~~ 244 (398)
..- + +.|++.|.++++...
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 532 1 258899999987544
No 202
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.50 E-value=0.0021 Score=59.45 Aligned_cols=87 Identities=15% Similarity=0.281 Sum_probs=56.2
Q ss_pred cchhhhhHhhhc-CCe------EEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHH
Q 015903 151 YSYRKVLPVLSK-NYH------AIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFSPVVVK 223 (398)
Q Consensus 151 ~~~~~~~~~L~~-g~~------Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~ 223 (398)
+.|..+++.|.. ||. -..+|+|= +. ...+. .+..+..+..-|+...+.-+.+|++|++||||+.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl-s~--~~~e~--rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~ly 198 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL-SY--HNSEE--RDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLY 198 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh-cc--CChhH--HHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHH
Confidence 578888988887 776 45678872 11 11110 01223344444444444446689999999999999999
Q ss_pred HHHhCCC--------ccceEEEECCcC
Q 015903 224 YASKHKD--------KLKDLILLNPPL 242 (398)
Q Consensus 224 ~a~~~p~--------~v~~lvl~~~~~ 242 (398)
+....++ .|+++|-++++.
T Consensus 199 Fl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 199 FLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHhcccccchhHHHHHHHHHHccCchh
Confidence 9887765 367777776654
No 203
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.41 E-value=0.0051 Score=40.68 Aligned_cols=45 Identities=13% Similarity=0.124 Sum_probs=24.1
Q ss_pred Cccccccccccc-cCCeEEEEEeccC--------CCCCEEEEecCCCCCccchh
Q 015903 110 IFGLDLGSASQA-DEIFRWFCVESGN--------ADNHTVLLIHGFPSQAYSYR 154 (398)
Q Consensus 110 ~~G~~~~~~~~~-~~g~~l~~~~~g~--------~~~p~vvllHG~~~~~~~~~ 154 (398)
..|++.+...++ .||+-+....-.. ..+|+|++.||+.+++..|-
T Consensus 7 ~~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 7 KHGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp HTT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred HcCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 356666666666 5787766544322 24689999999999999883
No 204
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=96.27 E-value=0.66 Score=41.13 Aligned_cols=108 Identities=14% Similarity=0.199 Sum_probs=73.6
Q ss_pred CCCEEEEecCCCCCcc----chhhhhHh---h-------hcCCeEEEEcCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 015903 136 DNHTVLLIHGFPSQAY----SYRKVLPV---L-------SKNYHAIAFDWL-GFGFSEKPQPGYGFDYTLDEYVASLESF 200 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~----~~~~~~~~---L-------~~g~~Vi~~D~r-G~G~S~~~~~~~~~~~~~~~~~~dl~~~ 200 (398)
..|..+.+.|.++.+. .|+++-+. + -+...++.+|.| |.|.|--.... .+..+.++.+.|+.++
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~-~Y~~~~~qia~Dl~~l 108 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSS-AYTTNNKQIALDLVEL 108 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCcc-cccccHHHHHHHHHHH
Confidence 4688999999976544 24443321 1 124678888877 77777443322 2355788999999999
Q ss_pred HHHh-------CCCcEEEEEeCcChHHHHHHHHhCC---------CccceEEEECCcCcc
Q 015903 201 VNEI-------ANDKVSLVVQGYFSPVVVKYASKHK---------DKLKDLILLNPPLTA 244 (398)
Q Consensus 201 l~~l-------~~~~v~lvG~S~Gg~ia~~~a~~~p---------~~v~~lvl~~~~~~~ 244 (398)
++.+ +-.+++|+--|+||-+|..++...- ..+.+++|-++...+
T Consensus 109 lk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP 168 (414)
T KOG1283|consen 109 LKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISP 168 (414)
T ss_pred HHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccCh
Confidence 9875 3358999999999999998876431 246677877775544
No 205
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.15 E-value=0.021 Score=48.81 Aligned_cols=52 Identities=12% Similarity=0.132 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhC----CCccceEEEECCcCcc
Q 015903 192 EYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASKH----KDKLKDLILLNPPLTA 244 (398)
Q Consensus 192 ~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~ 244 (398)
.-.+-+..+++..+ +++++.|||.||.+|...|... .++|.+++..++|...
T Consensus 70 ~A~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 70 SALAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 33344555555544 4599999999999999998874 3578999988886544
No 206
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.11 E-value=0.52 Score=40.44 Aligned_cols=97 Identities=16% Similarity=0.149 Sum_probs=55.4
Q ss_pred EEEEecCCC--CCc-cchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----CcEE
Q 015903 139 TVLLIHGFP--SQA-YSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIAN----DKVS 210 (398)
Q Consensus 139 ~vvllHG~~--~~~-~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~----~~v~ 210 (398)
.|=|+-|.. ... -.|+.+++.|++ ||.|++.-+. .|.-..... ..-...+-..+..+.+.-+. -+++
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~-~tfDH~~~A----~~~~~~f~~~~~~L~~~~~~~~~~lP~~ 93 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYV-VTFDHQAIA----REVWERFERCLRALQKRGGLDPAYLPVY 93 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecC-CCCcHHHHH----HHHHHHHHHHHHHHHHhcCCCcccCCee
Confidence 566666653 222 257899999988 9999998764 121100000 00011111122222222121 2678
Q ss_pred EEEeCcChHHHHHHHHhCCCccceEEEECC
Q 015903 211 LVVQGYFSPVVVKYASKHKDKLKDLILLNP 240 (398)
Q Consensus 211 lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 240 (398)
-+|||+|+-+-+.+...++..-++.|+++-
T Consensus 94 ~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 94 GVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred eeecccchHHHHHHhhhccCcccceEEEec
Confidence 899999999998888777655567677664
No 207
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.00 E-value=0.014 Score=50.34 Aligned_cols=38 Identities=13% Similarity=0.140 Sum_probs=34.4
Q ss_pred CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECCcC
Q 015903 205 ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPL 242 (398)
Q Consensus 205 ~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 242 (398)
+.++-.++|||+||.+++.....+|+.+.+.++++|..
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 44578899999999999999999999999999999864
No 208
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.96 E-value=0.26 Score=51.12 Aligned_cols=95 Identities=13% Similarity=0.163 Sum_probs=65.5
Q ss_pred CCCCEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CcEEEEE
Q 015903 135 ADNHTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIAN-DKVSLVV 213 (398)
Q Consensus 135 ~~~p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-~~v~lvG 213 (398)
.+.|+++|+|-+-+....+..++..|. .|-+|.-.-..-+ ..++++.+.....-++.+.. .+..++|
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle---------~PaYglQ~T~~vP---~dSies~A~~yirqirkvQP~GPYrl~G 2188 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE---------IPAYGLQCTEAVP---LDSIESLAAYYIRQIRKVQPEGPYRLAG 2188 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC---------CcchhhhccccCC---cchHHHHHHHHHHHHHhcCCCCCeeeec
Confidence 457899999998776666666665552 3334432222211 35688888877777777654 4889999
Q ss_pred eCcChHHHHHHHHhCC--CccceEEEECCc
Q 015903 214 QGYFSPVVVKYASKHK--DKLKDLILLNPP 241 (398)
Q Consensus 214 ~S~Gg~ia~~~a~~~p--~~v~~lvl~~~~ 241 (398)
+|+|+.++..+|.... +....+|++++.
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 9999999999987543 345668998874
No 209
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.85 E-value=0.16 Score=46.05 Aligned_cols=60 Identities=18% Similarity=0.145 Sum_probs=49.3
Q ss_pred CCCEEEEeeCCCCccCchhHHHHHHhc-----CCcEEEcCCCCCcccc-cChHHHHHHHHHHHhhc
Q 015903 335 KIPTTVCWGQRDRWLNNDGVEDFCNDS-----NHELIELPMAGHHVQE-DSGEELGKVISEIFRKR 394 (398)
Q Consensus 335 ~~Pvlii~G~~D~~v~~~~~~~l~~~~-----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 394 (398)
..+.+.+.+..|.++|....+++.+.. +++.+-+.++-|..+. ..|..+.+...+|++..
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 578899999999999999988885554 5566667788898864 58999999999999864
No 210
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.75 E-value=0.015 Score=50.32 Aligned_cols=36 Identities=8% Similarity=0.018 Sum_probs=25.4
Q ss_pred CCCcEEEEEeCcChHHHHHHHHhC-----CCccceEEEECC
Q 015903 205 ANDKVSLVVQGYFSPVVVKYASKH-----KDKLKDLILLNP 240 (398)
Q Consensus 205 ~~~~v~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~~ 240 (398)
...++++.|||+||.+|..++... +..+.++..-+|
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P 166 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQP 166 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCC
Confidence 346899999999999999988753 233554444444
No 211
>PLN02162 triacylglycerol lipase
Probab=95.61 E-value=0.03 Score=52.35 Aligned_cols=52 Identities=17% Similarity=0.149 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHh---C-----CCccceEEEECCc
Q 015903 190 LDEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASK---H-----KDKLKDLILLNPP 241 (398)
Q Consensus 190 ~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~---~-----p~~v~~lvl~~~~ 241 (398)
..++.+.+.+++......++++.|||+||.+|..+|.. + .+++.+++..+.|
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqP 320 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQP 320 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCC
Confidence 34555666666666555689999999999999997652 1 1234556666654
No 212
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.47 E-value=0.015 Score=53.01 Aligned_cols=84 Identities=14% Similarity=0.170 Sum_probs=51.0
Q ss_pred CCCEEEEecCCCC-CccchhhhhHhhhc---CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEE
Q 015903 136 DNHTVLLIHGFPS-QAYSYRKVLPVLSK---NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSL 211 (398)
Q Consensus 136 ~~p~vvllHG~~~-~~~~~~~~~~~L~~---g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~l 211 (398)
.+-.||+.||+-+ +...|...+....+ +..++.....|. ...... |-..-.+..++++.+.+....++++..
T Consensus 79 ~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~--~~~T~~--Gv~~lG~Rla~~~~e~~~~~si~kISf 154 (405)
T KOG4372|consen 79 PKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNN--MCQTFD--GVDVLGERLAEEVKETLYDYSIEKISF 154 (405)
T ss_pred CceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccc--hhhccc--cceeeecccHHHHhhhhhccccceeee
Confidence 3468999999977 56677666655544 443333333322 211111 112334555666666666666889999
Q ss_pred EEeCcChHHHHH
Q 015903 212 VVQGYFSPVVVK 223 (398)
Q Consensus 212 vG~S~Gg~ia~~ 223 (398)
+|||+||.++..
T Consensus 155 vghSLGGLvar~ 166 (405)
T KOG4372|consen 155 VGHSLGGLVARY 166 (405)
T ss_pred eeeecCCeeeeE
Confidence 999999976654
No 213
>PLN00413 triacylglycerol lipase
Probab=95.46 E-value=0.038 Score=51.84 Aligned_cols=52 Identities=12% Similarity=0.224 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHh---C-----CCccceEEEECCcC
Q 015903 191 DEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASK---H-----KDKLKDLILLNPPL 242 (398)
Q Consensus 191 ~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~---~-----p~~v~~lvl~~~~~ 242 (398)
.++.+.+..+++.....++++.|||+||.+|..+|.. + ..++.+++..+.|-
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 4566777777777666789999999999999998852 1 22455666666543
No 214
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.23 E-value=0.084 Score=48.40 Aligned_cols=106 Identities=15% Similarity=0.111 Sum_probs=84.1
Q ss_pred CCCCEEEEecCCCCCccch-hhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCcEE
Q 015903 135 ADNHTVLLIHGFPSQAYSY-RKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIA---NDKVS 210 (398)
Q Consensus 135 ~~~p~vvllHG~~~~~~~~-~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~---~~~v~ 210 (398)
.+.|+|+..-|++.+..-. .+....| +-+-+.+++|-+|.|.+.+..+. ..++++-+.|...+++.++ .++.+
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Ll--d~NQl~vEhRfF~~SrP~p~DW~-~Lti~QAA~D~Hri~~A~K~iY~~kWI 137 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLL--DGNQLSVEHRFFGPSRPEPADWS-YLTIWQAASDQHRIVQAFKPIYPGKWI 137 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhh--ccceEEEEEeeccCCCCCCCCcc-cccHhHhhHHHHHHHHHHHhhccCCce
Confidence 3479999999998654322 2333333 67889999999999988777655 3689999999998888874 46888
Q ss_pred EEEeCcChHHHHHHHHhCCCccceEEEECCcCc
Q 015903 211 LVVQGYFSPVVVKYASKHKDKLKDLILLNPPLT 243 (398)
Q Consensus 211 lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 243 (398)
-.|.|=||+.++.+=.-+|+-|++.|....+.+
T Consensus 138 STG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 138 STGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred ecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 999999999998887778999999998887754
No 215
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.93 E-value=0.45 Score=37.58 Aligned_cols=79 Identities=15% Similarity=0.270 Sum_probs=52.1
Q ss_pred CEEEEecCCCCCccchhhhhHhhhcCCe-EEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCc
Q 015903 138 HTVLLIHGFPSQAYSYRKVLPVLSKNYH-AIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGY 216 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~~~~~L~~g~~-Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~ 216 (398)
..||+.-|++..+..+..++ |.+++. ++++|++.... +.++.. .+.+.+|.+||
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~l----------dfDfsA-------------y~hirlvAwSM 66 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNL----------DFDFSA-------------YRHIRLVAWSM 66 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCc----------ccchhh-------------hhhhhhhhhhH
Confidence 38999999998887765543 234555 46778874321 122111 24567999999
Q ss_pred ChHHHHHHHHhCCCccceEEEECCcCc
Q 015903 217 FSPVVVKYASKHKDKLKDLILLNPPLT 243 (398)
Q Consensus 217 Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 243 (398)
|-.+|-++.... +++..+.+++...
T Consensus 67 GVwvAeR~lqg~--~lksatAiNGTgL 91 (214)
T COG2830 67 GVWVAERVLQGI--RLKSATAINGTGL 91 (214)
T ss_pred HHHHHHHHHhhc--cccceeeecCCCC
Confidence 999998887655 4777777776443
No 216
>PLN02571 triacylglycerol lipase
Probab=94.88 E-value=0.037 Score=51.30 Aligned_cols=37 Identities=8% Similarity=0.195 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHhCCC--cEEEEEeCcChHHHHHHHHh
Q 015903 191 DEYVASLESFVNEIAND--KVSLVVQGYFSPVVVKYASK 227 (398)
Q Consensus 191 ~~~~~dl~~~l~~l~~~--~v~lvG~S~Gg~ia~~~a~~ 227 (398)
+++..+|..+++....+ ++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 55667777777765433 68999999999999998865
No 217
>PLN02454 triacylglycerol lipase
Probab=94.87 E-value=0.039 Score=51.12 Aligned_cols=35 Identities=11% Similarity=0.183 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhCCCc--EEEEEeCcChHHHHHHHHh
Q 015903 193 YVASLESFVNEIANDK--VSLVVQGYFSPVVVKYASK 227 (398)
Q Consensus 193 ~~~dl~~~l~~l~~~~--v~lvG~S~Gg~ia~~~a~~ 227 (398)
+...|..+++.....+ |++.|||+||.+|+..|..
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 4444555555444343 9999999999999999864
No 218
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=94.84 E-value=0.2 Score=49.56 Aligned_cols=105 Identities=15% Similarity=0.137 Sum_probs=59.4
Q ss_pred CCEEEEecCCCC---Cccchhhh--hHhhhc-CCeEEEEcCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---
Q 015903 137 NHTVLLIHGFPS---QAYSYRKV--LPVLSK-NYHAIAFDWL----GFGFSEKPQPGYGFDYTLDEYVASLESFVNE--- 203 (398)
Q Consensus 137 ~p~vvllHG~~~---~~~~~~~~--~~~L~~-g~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~--- 203 (398)
.|++|++||++. +...+... ...+.. +.-|+.+++| |+.-...... .| .+.+.|+...+.-+-+.
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~-~g-N~gl~Dq~~AL~wv~~~I~~ 189 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAA-PG-NLGLFDQLLALRWVKDNIPS 189 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCC-CC-cccHHHHHHHHHHHHHHHHh
Confidence 699999999973 32223111 122222 5667788887 3211111111 11 34455555544444333
Q ss_pred h--CCCcEEEEEeCcChHHHHHHHHhC--CCccceEEEECCcCc
Q 015903 204 I--ANDKVSLVVQGYFSPVVVKYASKH--KDKLKDLILLNPPLT 243 (398)
Q Consensus 204 l--~~~~v~lvG~S~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 243 (398)
. +.++|.|+|||.||..+..+.... ...+..+|.+++...
T Consensus 190 FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 190 FGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred cCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 3 356899999999998887765431 245777777776543
No 219
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=94.81 E-value=3.1 Score=39.45 Aligned_cols=106 Identities=12% Similarity=0.097 Sum_probs=66.1
Q ss_pred EEEeccCCCCCEEEEecCCCCCccchh--hhhHhhhcCCeE-EEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 015903 128 FCVESGNADNHTVLLIHGFPSQAYSYR--KVLPVLSKNYHA-IAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEI 204 (398)
Q Consensus 128 ~~~~~g~~~~p~vvllHG~~~~~~~~~--~~~~~L~~g~~V-i~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l 204 (398)
+|-..|+-+.|..|..-|+-. .+.|. .++..| |... +.-|.|=-|++=-.-.. .+ -+.+.+-|.+.++.|
T Consensus 280 yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~L--g~PfLL~~DpRleGGaFYlGs~---ey-E~~I~~~I~~~L~~L 352 (511)
T TIGR03712 280 YYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRL--GAPFLLIGDPRLEGGAFYLGSD---EY-EQGIINVIQEKLDYL 352 (511)
T ss_pred EecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhc--CCCeEEeeccccccceeeeCcH---HH-HHHHHHHHHHHHHHh
Confidence 444456656788999999854 44443 334444 4433 34477766665221110 12 345566677777888
Q ss_pred CCC--cEEEEEeCcChHHHHHHHHhCCCccceEEEECCcC
Q 015903 205 AND--KVSLVVQGYFSPVVVKYASKHKDKLKDLILLNPPL 242 (398)
Q Consensus 205 ~~~--~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 242 (398)
+.+ .++|-|-|||.+-|+.|+++. ...++|+--|..
T Consensus 353 gF~~~qLILSGlSMGTfgAlYYga~l--~P~AIiVgKPL~ 390 (511)
T TIGR03712 353 GFDHDQLILSGLSMGTFGALYYGAKL--SPHAIIVGKPLV 390 (511)
T ss_pred CCCHHHeeeccccccchhhhhhcccC--CCceEEEcCccc
Confidence 765 699999999999999999875 235555554533
No 220
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.26 E-value=0.26 Score=40.45 Aligned_cols=60 Identities=18% Similarity=0.091 Sum_probs=46.5
Q ss_pred CCCEEEEeeCCCCccCchhHHHHHHhc------CCcEEEcCCCCCccccc---ChHHHHHHHHHHHhhc
Q 015903 335 KIPTTVCWGQRDRWLNNDGVEDFCNDS------NHELIELPMAGHHVQED---SGEELGKVISEIFRKR 394 (398)
Q Consensus 335 ~~Pvlii~G~~D~~v~~~~~~~l~~~~------~~~~~~i~~~gH~~~~e---~p~~~~~~i~~fl~~~ 394 (398)
+++.|-|-|+.|.+..+.+...-...+ ....++.+|+||+.... -.+++...|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 677788999999999987765555444 56778889999987544 3378899999999764
No 221
>PLN02408 phospholipase A1
Probab=94.18 E-value=0.068 Score=48.83 Aligned_cols=37 Identities=3% Similarity=0.043 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhCCC--cEEEEEeCcChHHHHHHHHhC
Q 015903 192 EYVASLESFVNEIAND--KVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 192 ~~~~dl~~~l~~l~~~--~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
++.+.|..+++....+ ++++.|||+||.+|...|...
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 4455666666665433 589999999999999988753
No 222
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.10 E-value=0.09 Score=43.38 Aligned_cols=52 Identities=21% Similarity=0.241 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHh--C----CCccceEEEECCcCcc
Q 015903 193 YVASLESFVNEIANDKVSLVVQGYFSPVVVKYASK--H----KDKLKDLILLNPPLTA 244 (398)
Q Consensus 193 ~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~--~----p~~v~~lvl~~~~~~~ 244 (398)
+.+.|.+....-...+++|+|+|.|+.++..++.. . .++|.++++++-+...
T Consensus 67 ~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 67 LVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred HHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 33334443344445689999999999999999877 2 3579999999876543
No 223
>PLN02934 triacylglycerol lipase
Probab=93.89 E-value=0.088 Score=49.86 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHH
Q 015903 190 LDEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYAS 226 (398)
Q Consensus 190 ~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~ 226 (398)
...+...+..+++.....++++.|||+||.+|..+|.
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 3456667777777766678999999999999999874
No 224
>PLN02310 triacylglycerol lipase
Probab=93.88 E-value=0.14 Score=47.43 Aligned_cols=37 Identities=8% Similarity=0.098 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHhC----CCcEEEEEeCcChHHHHHHHHh
Q 015903 191 DEYVASLESFVNEIA----NDKVSLVVQGYFSPVVVKYASK 227 (398)
Q Consensus 191 ~~~~~dl~~~l~~l~----~~~v~lvG~S~Gg~ia~~~a~~ 227 (398)
+++.+.|..+++... .-++.+.|||+||.+|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 456666777776653 1379999999999999998854
No 225
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.62 E-value=0.15 Score=42.73 Aligned_cols=70 Identities=10% Similarity=0.084 Sum_probs=44.1
Q ss_pred hhhcCCeEEEEcCCCCCCCCCC-----CCCCCCCCCHHHHHHHHHHHHHHhCC-CcEEEEEeCcChHHHHHHHHhC
Q 015903 159 VLSKNYHAIAFDWLGFGFSEKP-----QPGYGFDYTLDEYVASLESFVNEIAN-DKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 159 ~L~~g~~Vi~~D~rG~G~S~~~-----~~~~~~~~~~~~~~~dl~~~l~~l~~-~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
.+..-.+|+++=+|=....... ...........|..+....+|++.+. .+++|+|||.|+.++.++..++
T Consensus 41 ~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 41 AFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 3444678888877743221111 11101123456666666677777654 4899999999999999998765
No 226
>PLN02324 triacylglycerol lipase
Probab=93.29 E-value=0.11 Score=48.18 Aligned_cols=37 Identities=11% Similarity=0.105 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHhCC--CcEEEEEeCcChHHHHHHHHh
Q 015903 191 DEYVASLESFVNEIAN--DKVSLVVQGYFSPVVVKYASK 227 (398)
Q Consensus 191 ~~~~~dl~~~l~~l~~--~~v~lvG~S~Gg~ia~~~a~~ 227 (398)
+++.+.|..+++.... -+|++.|||+||.+|+..|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3445556666666543 269999999999999998864
No 227
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=93.21 E-value=0.35 Score=43.59 Aligned_cols=45 Identities=16% Similarity=0.271 Sum_probs=39.0
Q ss_pred CCCCCCEEEEeeCCCCccCchhHHHHHHhc--CCcEEEcCCCCCccc
Q 015903 332 KSWKIPTTVCWGQRDRWLNNDGVEDFCNDS--NHELIELPMAGHHVQ 376 (398)
Q Consensus 332 ~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~--~~~~~~i~~~gH~~~ 376 (398)
.++.+|-.|+.+..|.+.+++.+.-++..+ ...+..+|+..|...
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~ 372 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI 372 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh
Confidence 355899999999999999999999999998 667888999999764
No 228
>PLN02802 triacylglycerol lipase
Probab=92.94 E-value=0.14 Score=48.54 Aligned_cols=37 Identities=5% Similarity=0.091 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhCC--CcEEEEEeCcChHHHHHHHHhC
Q 015903 192 EYVASLESFVNEIAN--DKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 192 ~~~~dl~~~l~~l~~--~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
++.+.|..+++.... .+|++.|||+||.+|+..|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 344555666665432 2689999999999999988653
No 229
>PLN02753 triacylglycerol lipase
Probab=92.68 E-value=0.15 Score=48.49 Aligned_cols=37 Identities=8% Similarity=0.162 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHhCC-----CcEEEEEeCcChHHHHHHHHh
Q 015903 191 DEYVASLESFVNEIAN-----DKVSLVVQGYFSPVVVKYASK 227 (398)
Q Consensus 191 ~~~~~dl~~~l~~l~~-----~~v~lvG~S~Gg~ia~~~a~~ 227 (398)
+++...|..+++..+. -+|++.|||+||.+|+..|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3444556666665432 379999999999999998853
No 230
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.33 E-value=0.18 Score=48.03 Aligned_cols=37 Identities=8% Similarity=0.126 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHhC----CCcEEEEEeCcChHHHHHHHHh
Q 015903 191 DEYVASLESFVNEIA----NDKVSLVVQGYFSPVVVKYASK 227 (398)
Q Consensus 191 ~~~~~dl~~~l~~l~----~~~v~lvG~S~Gg~ia~~~a~~ 227 (398)
+++.++|..+++... ..++.+.|||+||.+|+..|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 445567777776653 2369999999999999998854
No 231
>PLN02719 triacylglycerol lipase
Probab=92.14 E-value=0.19 Score=47.69 Aligned_cols=36 Identities=8% Similarity=0.125 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCC-----CcEEEEEeCcChHHHHHHHHh
Q 015903 192 EYVASLESFVNEIAN-----DKVSLVVQGYFSPVVVKYASK 227 (398)
Q Consensus 192 ~~~~dl~~~l~~l~~-----~~v~lvG~S~Gg~ia~~~a~~ 227 (398)
++...|..+++.... -+|.+.|||+||.+|+..|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344555555555432 279999999999999998854
No 232
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=92.08 E-value=1.3 Score=42.64 Aligned_cols=88 Identities=13% Similarity=0.125 Sum_probs=58.2
Q ss_pred hhHhhhcCCeEEEEcCCCCCCCCCC-CCCCC-CCCC--------HHHHHHHHHHHHHHh---CCCcEEEEEeCcChHHHH
Q 015903 156 VLPVLSKNYHAIAFDWLGFGFSEKP-QPGYG-FDYT--------LDEYVASLESFVNEI---ANDKVSLVVQGYFSPVVV 222 (398)
Q Consensus 156 ~~~~L~~g~~Vi~~D~rG~G~S~~~-~~~~~-~~~~--------~~~~~~dl~~~l~~l---~~~~v~lvG~S~Gg~ia~ 222 (398)
+...+++||.++.-|- ||..+... ....+ .... +.+.+.--+++++.. ..++-+..|.|-||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 5677888999999996 56554331 11111 1111 222222333444433 345688999999999999
Q ss_pred HHHHhCCCccceEEEECCcCcc
Q 015903 223 KYASKHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 223 ~~a~~~p~~v~~lvl~~~~~~~ 244 (398)
..|.++|+.++++|.-+|....
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHHhChhhcCeEEeCCchHHH
Confidence 9999999999999999986543
No 233
>PLN02761 lipase class 3 family protein
Probab=91.99 E-value=0.21 Score=47.53 Aligned_cols=37 Identities=8% Similarity=0.124 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHhC-----C-CcEEEEEeCcChHHHHHHHHh
Q 015903 191 DEYVASLESFVNEIA-----N-DKVSLVVQGYFSPVVVKYASK 227 (398)
Q Consensus 191 ~~~~~dl~~~l~~l~-----~-~~v~lvG~S~Gg~ia~~~a~~ 227 (398)
+++...|..+++... . -+|++.|||+||.+|+..|..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 345556666666552 1 269999999999999998853
No 234
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=91.49 E-value=0.63 Score=42.44 Aligned_cols=41 Identities=15% Similarity=0.276 Sum_probs=32.1
Q ss_pred CCCcEEEEEeCcChHHHHHHHHhCCC-----ccceEEEECCcCccc
Q 015903 205 ANDKVSLVVQGYFSPVVVKYASKHKD-----KLKDLILLNPPLTAK 245 (398)
Q Consensus 205 ~~~~v~lvG~S~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~ 245 (398)
+..++.|+|||+|+.+...+.....+ .|+.+++++.+....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 66689999999999998887665443 488999999876543
No 235
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=91.15 E-value=0.83 Score=43.83 Aligned_cols=115 Identities=17% Similarity=0.106 Sum_probs=64.3
Q ss_pred CCCEEEEecCCCC---CccchhhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH---HhC--
Q 015903 136 DNHTVLLIHGFPS---QAYSYRKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVN---EIA-- 205 (398)
Q Consensus 136 ~~p~vvllHG~~~---~~~~~~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~---~l~-- 205 (398)
++-.||-+||+|. ++..-...++.+++ +..|+.+|+-=--+.. . ..-.++..-...-+|+ .+|
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaP--F-----PRaleEv~fAYcW~inn~allG~T 467 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAP--F-----PRALEEVFFAYCWAINNCALLGST 467 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCC--C-----CcHHHHHHHHHHHHhcCHHHhCcc
Confidence 3457888999983 33333333333333 8999999984222211 1 2223443333333332 244
Q ss_pred CCcEEEEEeCcChHHHHHHHHhC----CCccceEEEECCcCcccCCCCchhHHHhH
Q 015903 206 NDKVSLVVQGYFSPVVVKYASKH----KDKLKDLILLNPPLTAKHANLPSTLSIFS 257 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 257 (398)
.++|+++|-|.||.+.+..|.+. -..-+++++.=++........|..+..++
T Consensus 468 gEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~q~~pSPsRlLslM 523 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLLQPAPSPSRLLSLM 523 (880)
T ss_pred cceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhhcccCCCHHHHHHhh
Confidence 36999999999998777666542 22346888877665544444444433333
No 236
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=90.30 E-value=0.37 Score=44.17 Aligned_cols=38 Identities=11% Similarity=-0.021 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHh
Q 015903 190 LDEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASK 227 (398)
Q Consensus 190 ~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~ 227 (398)
...+.+++..+++....-++.+.|||+||.+|...|..
T Consensus 154 ~~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 154 NSGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 36788888888888876689999999999999998864
No 237
>PLN02847 triacylglycerol lipase
Probab=89.68 E-value=0.54 Score=45.57 Aligned_cols=21 Identities=10% Similarity=-0.081 Sum_probs=18.6
Q ss_pred CcEEEEEeCcChHHHHHHHHh
Q 015903 207 DKVSLVVQGYFSPVVVKYASK 227 (398)
Q Consensus 207 ~~v~lvG~S~Gg~ia~~~a~~ 227 (398)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 479999999999999998765
No 238
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=85.45 E-value=2.2 Score=41.17 Aligned_cols=60 Identities=13% Similarity=0.100 Sum_probs=48.4
Q ss_pred CCCEEEEeeCCCCccCchhHHHHHHhc-------------CCcEEEcCCCCCcccc--cChHHHHHHHHHHHhhc
Q 015903 335 KIPTTVCWGQRDRWLNNDGVEDFCNDS-------------NHELIELPMAGHHVQE--DSGEELGKVISEIFRKR 394 (398)
Q Consensus 335 ~~Pvlii~G~~D~~v~~~~~~~l~~~~-------------~~~~~~i~~~gH~~~~--e~p~~~~~~i~~fl~~~ 394 (398)
.-.+++.||..|..+++..+.++++++ -.++..+||.+|..-- ..+-.....|.+|+++-
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 688999999999999998887777766 1368889999998642 34557888999999863
No 239
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=83.92 E-value=2.4 Score=36.98 Aligned_cols=27 Identities=4% Similarity=0.012 Sum_probs=21.9
Q ss_pred HHhCCCcEEEEEeCcChHHHHHHHHhC
Q 015903 202 NEIANDKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 202 ~~l~~~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
+.....++.+.|||+||.+|..+..++
T Consensus 271 ~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 271 RIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HhCCCceEEEeccccchHHHHHhcccc
Confidence 333456899999999999999988776
No 240
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=83.92 E-value=2.4 Score=36.98 Aligned_cols=27 Identities=4% Similarity=0.012 Sum_probs=21.9
Q ss_pred HHhCCCcEEEEEeCcChHHHHHHHHhC
Q 015903 202 NEIANDKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 202 ~~l~~~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
+.....++.+.|||+||.+|..+..++
T Consensus 271 ~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 271 RIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HhCCCceEEEeccccchHHHHHhcccc
Confidence 333456899999999999999988776
No 241
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=82.22 E-value=6.4 Score=33.76 Aligned_cols=64 Identities=17% Similarity=0.132 Sum_probs=38.9
Q ss_pred CCeEEEEcCCCC-CC-CCCCCCCCCCCCCHHHHHHHHHHHHHHh--CCCcEEEEEeCcChHHHHHHHHhC
Q 015903 163 NYHAIAFDWLGF-GF-SEKPQPGYGFDYTLDEYVASLESFVNEI--ANDKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 163 g~~Vi~~D~rG~-G~-S~~~~~~~~~~~~~~~~~~dl~~~l~~l--~~~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
|+.+..+++|.. +- +.... ..+..+..+=++.+.+.++.. ..++++++|+|.|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~--~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGS--PTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCC--CccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 566777777752 11 11000 012345555556666666552 346899999999999998877653
No 242
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=82.18 E-value=17 Score=26.58 Aligned_cols=82 Identities=11% Similarity=0.107 Sum_probs=53.2
Q ss_pred hhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcCh--HHHHHHHHhCC
Q 015903 153 YRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFS--PVVVKYASKHK 229 (398)
Q Consensus 153 ~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg--~ia~~~a~~~p 229 (398)
|..+.+.+.. ++..-.+.++..|.+-...-.. ...+.=..-|..+++.+...++++||-|--. -+-..+|.++|
T Consensus 13 y~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~---~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P 89 (100)
T PF09949_consen 13 YPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKS---GAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFP 89 (100)
T ss_pred HHHHHHHHHhcCCCCCceEcccCCccccccccC---CchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCC
Confidence 4455566655 6766667777775543222110 1113444667888888888899999988653 44455788899
Q ss_pred CccceEEE
Q 015903 230 DKLKDLIL 237 (398)
Q Consensus 230 ~~v~~lvl 237 (398)
++|.++.+
T Consensus 90 ~~i~ai~I 97 (100)
T PF09949_consen 90 GRILAIYI 97 (100)
T ss_pred CCEEEEEE
Confidence 99998864
No 243
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=75.01 E-value=6.5 Score=38.38 Aligned_cols=56 Identities=13% Similarity=0.109 Sum_probs=38.8
Q ss_pred HHHHHHHHhhccCCC-CCCEEEEeeCCCCccCchhHHHHHHhc---------CCcEEEcCCCCCcc
Q 015903 320 QYVEEMRTILMDKSW-KIPTTVCWGQRDRWLNNDGVEDFCNDS---------NHELIELPMAGHHV 375 (398)
Q Consensus 320 ~~~~~~~~~~~~~~i-~~Pvlii~G~~D~~v~~~~~~~l~~~~---------~~~~~~i~~~gH~~ 375 (398)
.....+..+....++ ..|.+|+||..|.++|..+.-+-+-.+ ..+++++.++-|+-
T Consensus 539 ~v~~gv~~v~~tg~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfD 604 (690)
T PF10605_consen 539 RVQAGVAEVRLTGNLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFD 604 (690)
T ss_pred HHHHHHHHHHhcCCcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeech
Confidence 344445555555666 899999999999999987643322222 45788899988864
No 244
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=70.98 E-value=8.5 Score=37.48 Aligned_cols=36 Identities=14% Similarity=0.223 Sum_probs=24.9
Q ss_pred CCcEEEEEeCcChHHHHHHHHh-----CCC------ccceEEEECCc
Q 015903 206 NDKVSLVVQGYFSPVVVKYASK-----HKD------KLKDLILLNPP 241 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~-----~p~------~v~~lvl~~~~ 241 (398)
..+++.+||||||.++=.+... .|+ ..+++|.++.+
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 3478999999999887665543 243 35667777665
No 245
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=70.58 E-value=46 Score=31.95 Aligned_cols=163 Identities=10% Similarity=0.063 Sum_probs=75.1
Q ss_pred CCCCCchhhhhccceEEEeecCCCCcccC-CCCccccccccccc--cCCeEEEEEec--cCCCCCEEEEecCCCC---Cc
Q 015903 79 DGSSPADEWFKQGKIVKAVTVSGSGETAK-DPIFGLDLGSASQA--DEIFRWFCVES--GNADNHTVLLIHGFPS---QA 150 (398)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~G~~~~~~~~~--~~g~~l~~~~~--g~~~~p~vvllHG~~~---~~ 150 (398)
..|.+..+|...-....-...=.+.++.. ....|.+|=.-... -|=+-+..... .+.+..++|.|-|+|. ++
T Consensus 72 kkP~p~~pW~g~ldAtt~a~~C~Q~~D~yfp~F~GsEMWNpNt~lSEDCLYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~ 151 (601)
T KOG4389|consen 72 KKPEPKQPWSGVLDATTLANTCYQTRDTYFPGFWGSEMWNPNTELSEDCLYLNVWAPAADPYNLTVLVWIYGGGFYSGTP 151 (601)
T ss_pred CCCCcCCCccceecccccchhhhccccccCCCCCcccccCCCCCcChhceEEEEeccCCCCCCceEEEEEEcCccccCCc
Confidence 34566677766433322222212221211 12555555322222 13233443332 1223446777888763 22
Q ss_pred c--chhhhhHhhhc--CCeEEEEcCC-------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCcEEEEEeCcC
Q 015903 151 Y--SYRKVLPVLSK--NYHAIAFDWL-------GFGFSEKPQPGYGFDYTLDEYVASLESFVNEIA--NDKVSLVVQGYF 217 (398)
Q Consensus 151 ~--~~~~~~~~L~~--g~~Vi~~D~r-------G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~--~~~v~lvG~S~G 217 (398)
. .|+ .+.|+. +--|+.+++| -.+.....+...| -.+..--.+.+.+-+...| .+++.|+|.|.|
T Consensus 152 SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmG-l~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAG 228 (601)
T KOG4389|consen 152 SLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMG-LLDQQLALQWVQENIAAFGGNPSRVTLFGESAG 228 (601)
T ss_pred ceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccc-hHHHHHHHHHHHHhHHHhCCCcceEEEeccccc
Confidence 1 232 244444 4444555655 1222222222111 1122222344555555564 568999999999
Q ss_pred hHHHHHHHHhCC---CccceEEEECCcCccc
Q 015903 218 SPVVVKYASKHK---DKLKDLILLNPPLTAK 245 (398)
Q Consensus 218 g~ia~~~a~~~p---~~v~~lvl~~~~~~~~ 245 (398)
+.....-.. .| ..++..|+-++....+
T Consensus 229 aASv~aHLl-sP~S~glF~raIlQSGS~~~p 258 (601)
T KOG4389|consen 229 AASVVAHLL-SPGSRGLFHRAILQSGSLNNP 258 (601)
T ss_pred hhhhhheec-CCCchhhHHHHHhhcCCCCCC
Confidence 754433222 23 3577778777665544
No 246
>PRK12467 peptide synthase; Provisional
Probab=69.59 E-value=20 Score=44.73 Aligned_cols=96 Identities=10% Similarity=0.055 Sum_probs=68.8
Q ss_pred CEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCcEEEEEeCc
Q 015903 138 HTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIA-NDKVSLVVQGY 216 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-~~~v~lvG~S~ 216 (398)
+.+++.|...+....+..+...|..+..++.+..++.-.-... ..+++.++....+.+.+.. ..+..+.|+|+
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~~~~~~l~~~~~~~d~~~------~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~ 3766 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGDRHVLGLTCRHLLDDGWQ------DTSLQAMAVQYADYILWQQAKGPYGLLGWSL 3766 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCCCcEEEEeccccccccCC------ccchHHHHHHHHHHHHHhccCCCeeeeeeec
Confidence 5699999999888888888888877888888887765322221 2356777777777666654 34788999999
Q ss_pred ChHHHHHHHHh---CCCccceEEEEC
Q 015903 217 FSPVVVKYASK---HKDKLKDLILLN 239 (398)
Q Consensus 217 Gg~ia~~~a~~---~p~~v~~lvl~~ 239 (398)
||.++..++.. ..+.+.-+.+++
T Consensus 3767 g~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3767 GGTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred chHHHHHHHHHHHHcCCceeEEEEEe
Confidence 99999988764 234455555554
No 247
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=61.63 E-value=22 Score=34.13 Aligned_cols=42 Identities=21% Similarity=0.297 Sum_probs=32.3
Q ss_pred hCCCcEEEEEeCcChHHHHHHHHh-----CCCccceEEEECCcCccc
Q 015903 204 IANDKVSLVVQGYFSPVVVKYASK-----HKDKLKDLILLNPPLTAK 245 (398)
Q Consensus 204 l~~~~v~lvG~S~Gg~ia~~~a~~-----~p~~v~~lvl~~~~~~~~ 245 (398)
+|..+|.|||+|+|+-+...+... .-+.|..+++++.|....
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 477899999999999998866542 223688999999876543
No 248
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=59.34 E-value=1.5e+02 Score=27.94 Aligned_cols=101 Identities=11% Similarity=0.063 Sum_probs=60.6
Q ss_pred CEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCC--------CC-----------CCCCHHHHHHHH
Q 015903 138 HTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPG--------YG-----------FDYTLDEYVASL 197 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~--------~~-----------~~~~~~~~~~dl 197 (398)
|+|+++--+-.-...+..+.+.+.+ |..|+.+|.-=.|.......- .+ ....++.+.+-+
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 3555554444444566677777766 999999997544333222110 00 001133344444
Q ss_pred HHHHHHh----CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEE
Q 015903 198 ESFVNEI----ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILL 238 (398)
Q Consensus 198 ~~~l~~l----~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~ 238 (398)
..++..+ .++-++-+|.|.|..++.......|=-+-++++.
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 5555544 2456788999999999999988888766666654
No 249
>PF03283 PAE: Pectinacetylesterase
Probab=57.99 E-value=1.2e+02 Score=28.22 Aligned_cols=39 Identities=13% Similarity=-0.065 Sum_probs=26.0
Q ss_pred CCcEEEEEeCcChHHHHHHHH----hCCCccceEEEECCcCcc
Q 015903 206 NDKVSLVVQGYFSPVVVKYAS----KHKDKLKDLILLNPPLTA 244 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~----~~p~~v~~lvl~~~~~~~ 244 (398)
.++++|.|.|.||.-++..+- ..|..++-..+.++....
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~ 197 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFL 197 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccc
Confidence 468999999999988877553 356544545555554443
No 250
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=57.24 E-value=36 Score=27.05 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=38.3
Q ss_pred hhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHH
Q 015903 154 RKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFSPVVVK 223 (398)
Q Consensus 154 ~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~ 223 (398)
..+...+.+|-.|++.|.+|- .++-+++++.+..+.+. |-+=.+++|.|.|=.-++.
T Consensus 58 ~~il~~i~~~~~vi~Ld~~Gk------------~~sSe~fA~~l~~~~~~-G~~i~f~IGG~~Gl~~~~~ 114 (155)
T COG1576 58 EAILAAIPKGSYVVLLDIRGK------------ALSSEEFADFLERLRDD-GRDISFLIGGADGLSEAVK 114 (155)
T ss_pred HHHHHhcCCCCeEEEEecCCC------------cCChHHHHHHHHHHHhc-CCeEEEEEeCcccCCHHHH
Confidence 345566666889999999874 34567777777766543 4334678899999544433
No 251
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=57.03 E-value=7.9 Score=29.66 Aligned_cols=21 Identities=24% Similarity=0.445 Sum_probs=18.1
Q ss_pred cCCCCCEEEEecCCCCCccch
Q 015903 133 GNADNHTVLLIHGFPSQAYSY 153 (398)
Q Consensus 133 g~~~~p~vvllHG~~~~~~~~ 153 (398)
.++++|.|+-+||++|....|
T Consensus 48 ~~p~KpLVlSfHG~tGtGKn~ 68 (127)
T PF06309_consen 48 PNPRKPLVLSFHGWTGTGKNF 68 (127)
T ss_pred CCCCCCEEEEeecCCCCcHHH
Confidence 356689999999999998887
No 252
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=55.97 E-value=54 Score=30.33 Aligned_cols=85 Identities=18% Similarity=0.234 Sum_probs=58.4
Q ss_pred CEEEEecCCCC-------CccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEE
Q 015903 138 HTVLLIHGFPS-------QAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVS 210 (398)
Q Consensus 138 p~vvllHG~~~-------~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~ 210 (398)
..||++||-.. +.+.|..+++.+.+.--+-.+|.--.|.-++ +++-+.-++.++... +-+
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G----------leeDa~~lR~~a~~~---~~~ 238 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG----------LEEDAYALRLFAEVG---PEL 238 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc----------hHHHHHHHHHHHHhC---CcE
Confidence 36999999754 3447999999888866667778776665432 445555555555542 227
Q ss_pred EEEeCcChHHHHHHHHhCCCccceEEEECC
Q 015903 211 LVVQGYFSPVVVKYASKHKDKLKDLILLNP 240 (398)
Q Consensus 211 lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 240 (398)
++..|+.=..++ |.+||-++.+++.
T Consensus 239 lva~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 239 LVASSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred EEEehhhhhhhh-----hhhccceeEEEeC
Confidence 888888765543 6789999999865
No 253
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=55.41 E-value=86 Score=27.87 Aligned_cols=22 Identities=14% Similarity=0.052 Sum_probs=19.0
Q ss_pred CCcEEEEEeCcChHHHHHHHHh
Q 015903 206 NDKVSLVVQGYFSPVVVKYASK 227 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~ 227 (398)
.++++++|+|-|++.|-.+|..
T Consensus 91 gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 91 GDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred cceEEEEecCccHHHHHHHHHH
Confidence 4579999999999999888854
No 254
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=53.72 E-value=13 Score=33.30 Aligned_cols=30 Identities=10% Similarity=-0.072 Sum_probs=23.6
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHH
Q 015903 197 LESFVNEIANDKVSLVVQGYFSPVVVKYAS 226 (398)
Q Consensus 197 l~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~ 226 (398)
+.++++..|+++-.++|||+|-+.|+.++.
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 344556778889999999999988877664
No 255
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=51.28 E-value=9.4 Score=34.73 Aligned_cols=29 Identities=7% Similarity=-0.024 Sum_probs=22.9
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHH
Q 015903 197 LESFVNEIANDKVSLVVQGYFSPVVVKYA 225 (398)
Q Consensus 197 l~~~l~~l~~~~v~lvG~S~Gg~ia~~~a 225 (398)
+.++++..|+++-.++|||+|=+.|+.++
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHC
Confidence 44555677888999999999988877665
No 256
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=51.16 E-value=62 Score=27.21 Aligned_cols=64 Identities=13% Similarity=-0.001 Sum_probs=46.4
Q ss_pred CC-eEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCc----ChHHHHHHHHhCC-CccceEE
Q 015903 163 NY-HAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGY----FSPVVVKYASKHK-DKLKDLI 236 (398)
Q Consensus 163 g~-~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~----Gg~ia~~~a~~~p-~~v~~lv 236 (398)
|. +|+..|.++.. .++.+.+++.+.++++..+ -.++|+|+|. |..++-.+|.+.. ..+..++
T Consensus 76 G~d~V~~~~~~~~~-----------~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~ 143 (202)
T cd01714 76 GADRAILVSDRAFA-----------GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVS 143 (202)
T ss_pred CCCEEEEEeccccc-----------CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEE
Confidence 54 67877765432 3568899999999998877 5788999998 8889999888752 2344444
Q ss_pred EE
Q 015903 237 LL 238 (398)
Q Consensus 237 l~ 238 (398)
-+
T Consensus 144 ~l 145 (202)
T cd01714 144 KI 145 (202)
T ss_pred EE
Confidence 33
No 257
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=49.82 E-value=22 Score=33.28 Aligned_cols=56 Identities=11% Similarity=0.137 Sum_probs=36.9
Q ss_pred CCCEEEEeeCCCCccCchhHHHHHHhc-CCcEEEcCCCCCcccc-----cChHHHHHHHHHHHh
Q 015903 335 KIPTTVCWGQRDRWLNNDGVEDFCNDS-NHELIELPMAGHHVQE-----DSGEELGKVISEIFR 392 (398)
Q Consensus 335 ~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~ 392 (398)
.-.+|+|+|++|++.-... .+-+.- +..+.+.||++|...+ +..++....|.+|..
T Consensus 351 ~~rmlFVYG~nDPW~A~~f--~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 351 GPRMLFVYGENDPWSAEPF--RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred CCeEEEEeCCCCCcccCcc--ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 5678999999999864221 111112 6778888999998643 234566667777753
No 258
>PRK02399 hypothetical protein; Provisional
Probab=49.73 E-value=2.3e+02 Score=26.73 Aligned_cols=101 Identities=10% Similarity=0.078 Sum_probs=58.6
Q ss_pred CEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCCCCCCCCCCC-C----------------CC--CCCCHHHHHHHH
Q 015903 138 HTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQP-G----------------YG--FDYTLDEYVASL 197 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~-~----------------~~--~~~~~~~~~~dl 197 (398)
+.|+++--+-.-..++..+.+.+.+ |..|+.+|.-..|....... . .. ...-++.+.+-.
T Consensus 4 ~~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 4 KRIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 4555543333333456666666666 99999999843332211110 0 00 001123444455
Q ss_pred HHHHHHh----CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEE
Q 015903 198 ESFVNEI----ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILL 238 (398)
Q Consensus 198 ~~~l~~l----~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~ 238 (398)
..+++.+ +++-++-+|.|.|..++.......|=-+-++++.
T Consensus 84 ~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 84 AAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 5555543 3556888999999999999988888766666554
No 259
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=48.30 E-value=17 Score=32.53 Aligned_cols=30 Identities=3% Similarity=-0.229 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHH
Q 015903 197 LESFVNEIANDKVSLVVQGYFSPVVVKYAS 226 (398)
Q Consensus 197 l~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~ 226 (398)
+.++++..+.++..++|||+|=+.|+.++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 445556668889999999999988887664
No 260
>PRK10279 hypothetical protein; Provisional
Probab=48.10 E-value=19 Score=32.43 Aligned_cols=33 Identities=12% Similarity=-0.019 Sum_probs=26.1
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCC
Q 015903 197 LESFVNEIANDKVSLVVQGYFSPVVVKYASKHK 229 (398)
Q Consensus 197 l~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p 229 (398)
+.+.+++.++..-.++|.|+|+.++..||....
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 444555668887889999999999999997643
No 261
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=48.09 E-value=30 Score=30.57 Aligned_cols=39 Identities=13% Similarity=0.119 Sum_probs=27.7
Q ss_pred CcEEEEEeCcChHHHHHHHH---hCCCccceEEEECCcCccc
Q 015903 207 DKVSLVVQGYFSPVVVKYAS---KHKDKLKDLILLNPPLTAK 245 (398)
Q Consensus 207 ~~v~lvG~S~Gg~ia~~~a~---~~p~~v~~lvl~~~~~~~~ 245 (398)
.|+++.|.|+|++-+...-. ..-+++++++..+|+....
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s~ 150 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFSP 150 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCCh
Confidence 37999999999866554322 2235799999999876543
No 262
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=47.25 E-value=37 Score=29.80 Aligned_cols=92 Identities=15% Similarity=0.064 Sum_probs=50.0
Q ss_pred CCCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcC----------CCCCCCCCCCCCCC----CCCCHHHHHHHHHHH
Q 015903 136 DNHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDW----------LGFGFSEKPQPGYG----FDYTLDEYVASLESF 200 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~----------rG~G~S~~~~~~~~----~~~~~~~~~~dl~~~ 200 (398)
.-|.+++.||+++...........++. ++.++..+. +|++.+........ .......+..+....
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLL 127 (299)
T ss_pred cCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHHH
Confidence 457899999999888776555555555 777677664 23222221111000 000000111111111
Q ss_pred HHHhCCCcEEEEEeCcChHHHHHHHHhCC
Q 015903 201 VNEIANDKVSLVVQGYFSPVVVKYASKHK 229 (398)
Q Consensus 201 l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p 229 (398)
.. ...+....|+++|+..+..++...+
T Consensus 128 ~~--~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 128 GA--SLGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred hh--hcCcceEEEEEeeccchHHHhhcch
Confidence 11 1257788899999888888887765
No 263
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=47.23 E-value=22 Score=32.19 Aligned_cols=32 Identities=9% Similarity=-0.097 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhC
Q 015903 197 LESFVNEIANDKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 197 l~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
+.+.+++.++..-.++|.|+|+.++..+|...
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 44555666877778999999999999999764
No 264
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=46.90 E-value=23 Score=28.81 Aligned_cols=33 Identities=12% Similarity=-0.109 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCC
Q 015903 197 LESFVNEIANDKVSLVVQGYFSPVVVKYASKHK 229 (398)
Q Consensus 197 l~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p 229 (398)
+.+.+++.++..-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 344445557777789999999999999998643
No 265
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=46.49 E-value=34 Score=27.35 Aligned_cols=51 Identities=22% Similarity=0.289 Sum_probs=33.9
Q ss_pred hhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CcEEEEEeCcC
Q 015903 154 RKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIAN-DKVSLVVQGYF 217 (398)
Q Consensus 154 ~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-~~v~lvG~S~G 217 (398)
..+...+.++-.++++|-+|- ..+-+++++.+..+... +. +=++++|.+.|
T Consensus 58 ~~il~~i~~~~~~i~Ld~~Gk------------~~sS~~fA~~l~~~~~~-g~~~i~F~IGG~~G 109 (155)
T PF02590_consen 58 ERILKKIPPNDYVILLDERGK------------QLSSEEFAKKLERWMNQ-GKSDIVFIIGGADG 109 (155)
T ss_dssp HHHHCTSHTTSEEEEE-TTSE------------E--HHHHHHHHHHHHHT-TS-EEEEEE-BTTB
T ss_pred HHHHhhccCCCEEEEEcCCCc------------cCChHHHHHHHHHHHhc-CCceEEEEEecCCC
Confidence 344455556888999999874 45678888888887665 33 34678899999
No 266
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=43.75 E-value=22 Score=31.72 Aligned_cols=28 Identities=7% Similarity=-0.241 Sum_probs=22.0
Q ss_pred HHHHHhC-CCcEEEEEeCcChHHHHHHHH
Q 015903 199 SFVNEIA-NDKVSLVVQGYFSPVVVKYAS 226 (398)
Q Consensus 199 ~~l~~l~-~~~v~lvG~S~Gg~ia~~~a~ 226 (398)
.+++..+ +++..++|||+|=+.|+.++.
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 4445556 889999999999988887764
No 267
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=41.83 E-value=26 Score=31.64 Aligned_cols=32 Identities=13% Similarity=-0.051 Sum_probs=26.8
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhC
Q 015903 197 LESFVNEIANDKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 197 l~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
+.+.+++.+++.-++.|-|+|+.++..+|...
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 45566777888889999999999999999854
No 268
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=41.83 E-value=83 Score=25.26 Aligned_cols=52 Identities=21% Similarity=0.254 Sum_probs=34.6
Q ss_pred hhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcCh
Q 015903 155 KVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFS 218 (398)
Q Consensus 155 ~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg 218 (398)
.+...+..+-.+|+.|-+|- ..+-.++++.+....+.-..+-++++|.+.|=
T Consensus 59 ~il~~l~~~~~~i~LDe~Gk------------~~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~ 110 (157)
T PRK00103 59 RILAALPKGARVIALDERGK------------QLSSEEFAQELERWRDDGRSDVAFVIGGADGL 110 (157)
T ss_pred HHHhhCCCCCEEEEEcCCCC------------cCCHHHHHHHHHHHHhcCCccEEEEEcCcccc
Confidence 34455555667999999874 35567888888776433212446788999884
No 269
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=41.75 E-value=29 Score=28.75 Aligned_cols=30 Identities=10% Similarity=-0.180 Sum_probs=22.7
Q ss_pred HHHHHhCCCcEEEEEeCcChHHHHHHHHhC
Q 015903 199 SFVNEIANDKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 199 ~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
+.+++.++..-.++|-|.||.++..++...
T Consensus 19 ~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 19 KALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 334445666677999999999999999753
No 270
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=41.58 E-value=29 Score=30.72 Aligned_cols=32 Identities=16% Similarity=-0.094 Sum_probs=25.2
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhC
Q 015903 197 LESFVNEIANDKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 197 l~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
+.+.+++.++.--.+.|.|+|+.++..||...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44455666777677899999999999999763
No 271
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=41.57 E-value=61 Score=27.41 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=25.7
Q ss_pred CCEEEEecCCCCCccc--h-hhhhHhhhc-CCeEEEEcC
Q 015903 137 NHTVLLIHGFPSQAYS--Y-RKVLPVLSK-NYHAIAFDW 171 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~--~-~~~~~~L~~-g~~Vi~~D~ 171 (398)
++.|.||+-.+.+... | +.....|.+ |..|.-+++
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 5799999988876654 4 455567777 888877765
No 272
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=40.66 E-value=63 Score=27.92 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=25.1
Q ss_pred CCEEEEecCCC--CCccch-hhhhHhhhc-CCeEEEEcCC
Q 015903 137 NHTVLLIHGFP--SQAYSY-RKVLPVLSK-NYHAIAFDWL 172 (398)
Q Consensus 137 ~p~vvllHG~~--~~~~~~-~~~~~~L~~-g~~Vi~~D~r 172 (398)
+|.|+||+-.. .+...| +.+...+.+ |+.|..++..
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 57899999876 334444 345566766 9998888765
No 273
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=40.59 E-value=34 Score=29.26 Aligned_cols=30 Identities=13% Similarity=-0.055 Sum_probs=23.0
Q ss_pred HHHHHhCCCcEEEEEeCcChHHHHHHHHhC
Q 015903 199 SFVNEIANDKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 199 ~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
..+++.+++.-.++|-|.|+.++..+|...
T Consensus 20 ~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 20 AALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 333444666677999999999999999754
No 274
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=40.53 E-value=18 Score=28.97 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=27.7
Q ss_pred cCCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHHh----CCCcEEEEEeCcChH
Q 015903 170 DWLGFGFSEKPQPGYGFDYTLDEYVASL----ESFVNEI----ANDKVSLVVQGYFSP 219 (398)
Q Consensus 170 D~rG~G~S~~~~~~~~~~~~~~~~~~dl----~~~l~~l----~~~~v~lvG~S~Gg~ 219 (398)
-+-|||+........ ..++.++++.-+ ..+.+.. .+++|.|+|.|++..
T Consensus 60 ~lVGHG~~~~~~~~l-~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 60 QLVGHGRDEFNNQTL-AGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEE--EESSTSSSEE-TTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEeCCCcCCCcee-CCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 344788762222211 146788888888 4444444 356899999999976
No 275
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=39.92 E-value=84 Score=25.29 Aligned_cols=50 Identities=16% Similarity=0.281 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHh--CCCcEEEEEeCcChHHHHHHHHhCCCccceEEEECC
Q 015903 191 DEYVASLESFVNEI--ANDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNP 240 (398)
Q Consensus 191 ~~~~~dl~~~l~~l--~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 240 (398)
++..+.+.++++.+ ..++|+++|-|..|...+.++...++.+..++=.+|
T Consensus 51 ~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 51 EQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 34444455555444 346799999999999999998877777888776554
No 276
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=38.77 E-value=2.5e+02 Score=26.60 Aligned_cols=74 Identities=20% Similarity=0.194 Sum_probs=39.4
Q ss_pred CEEEEecCCCCCcc---chhhhhHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--hCCCcEEE
Q 015903 138 HTVLLIHGFPSQAY---SYRKVLPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNE--IANDKVSL 211 (398)
Q Consensus 138 p~vvllHG~~~~~~---~~~~~~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~--l~~~~v~l 211 (398)
.+||+++.+...-+ .....+..|.+ |+.|+-+.. |+ -.......|.-.+.+++...+...+.. +..+++.+
T Consensus 117 ~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~~-g~--la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~vlI 193 (399)
T PRK05579 117 APVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPAS-GR--LACGDVGPGRMAEPEEIVAAAERALSPKDLAGKRVLI 193 (399)
T ss_pred CCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCCC-cc--ccCCCcCCCCCCCHHHHHHHHHHHhhhcccCCCEEEE
Confidence 35666664432211 23445566666 888875542 22 111111222245678888888777743 33456777
Q ss_pred EEe
Q 015903 212 VVQ 214 (398)
Q Consensus 212 vG~ 214 (398)
.|.
T Consensus 194 TgG 196 (399)
T PRK05579 194 TAG 196 (399)
T ss_pred eCC
Confidence 776
No 277
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=38.04 E-value=2.1e+02 Score=23.68 Aligned_cols=35 Identities=20% Similarity=0.306 Sum_probs=26.4
Q ss_pred CCCEEEEecCCCCCccch--hhhhHhhhc-CCeEEEEc
Q 015903 136 DNHTVLLIHGFPSQAYSY--RKVLPVLSK-NYHAIAFD 170 (398)
Q Consensus 136 ~~p~vvllHG~~~~~~~~--~~~~~~L~~-g~~Vi~~D 170 (398)
.++.+|++-|+.++..+- ..+.+.|.+ |++++..|
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 367899999998776643 444566655 99999998
No 278
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=34.29 E-value=44 Score=28.36 Aligned_cols=33 Identities=6% Similarity=-0.189 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCC
Q 015903 197 LESFVNEIANDKVSLVVQGYFSPVVVKYASKHK 229 (398)
Q Consensus 197 l~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p 229 (398)
+.+.+.+.+...-.+.|.|.|+.++..+|...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 334444556665678999999999999998764
No 279
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=32.72 E-value=1.3e+02 Score=29.06 Aligned_cols=86 Identities=15% Similarity=0.171 Sum_probs=55.6
Q ss_pred EEecCCCCCccchhhh-hHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcCh
Q 015903 141 LLIHGFPSQAYSYRKV-LPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFS 218 (398)
Q Consensus 141 vllHG~~~~~~~~~~~-~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg 218 (398)
+|--|+|.+...-... +++-.. ||+|+.+|--|.= .+-..+...+..+++.-.++.|+.+|--+=|
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~------------~~~~~lm~~l~k~~~~~~pd~i~~vgealvg 509 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRM------------HNNAPLMTSLAKLIKVNKPDLILFVGEALVG 509 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccc------------cCChhHHHHHHHHHhcCCCceEEEehhhhhC
Confidence 3445666654443222 233333 9999999987642 2235566778888888788899999988877
Q ss_pred HHHHHHHHhC---------CCccceEEEE
Q 015903 219 PVVVKYASKH---------KDKLKDLILL 238 (398)
Q Consensus 219 ~ia~~~a~~~---------p~~v~~lvl~ 238 (398)
.=++.-+..+ |..++++++.
T Consensus 510 ~dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 510 NDSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred cHHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 7666554432 4457777764
No 280
>COG0218 Predicted GTPase [General function prediction only]
Probab=32.50 E-value=63 Score=27.04 Aligned_cols=55 Identities=15% Similarity=0.235 Sum_probs=33.6
Q ss_pred CCCEEEEeeCCCCccCchhH---HHHHHhc----CCc--EEEcCCCCCcccccChHHHHHHHHHHHhh
Q 015903 335 KIPTTVCWGQRDRWLNNDGV---EDFCNDS----NHE--LIELPMAGHHVQEDSGEELGKVISEIFRK 393 (398)
Q Consensus 335 ~~Pvlii~G~~D~~v~~~~~---~~l~~~~----~~~--~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 393 (398)
.+|++++.-.-|.+-..+.. ...++.+ ... ++.++-... +.-+++.+.|.+++..
T Consensus 135 ~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k----~Gi~~l~~~i~~~~~~ 198 (200)
T COG0218 135 GIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKK----KGIDELKAKILEWLKE 198 (200)
T ss_pred CCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccc----cCHHHHHHHHHHHhhc
Confidence 89999999999998765543 3344333 222 334432222 1257777888877764
No 281
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=32.19 E-value=56 Score=26.60 Aligned_cols=30 Identities=17% Similarity=0.005 Sum_probs=22.7
Q ss_pred HHHHhCCCcEEEEEeCcChHHHHHHHHhCC
Q 015903 200 FVNEIANDKVSLVVQGYFSPVVVKYASKHK 229 (398)
Q Consensus 200 ~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p 229 (398)
.+++.+...-.++|-|.|+.++..++...+
T Consensus 21 ~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 21 ALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 334456665678899999999999987653
No 282
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=30.91 E-value=1.9e+02 Score=25.77 Aligned_cols=72 Identities=17% Similarity=0.271 Sum_probs=43.8
Q ss_pred CCEEEEecCCCCCccchhhhhHhhhc-CCeEEEEcCCC--------CCCCCCC--CCCCCCC-CCHHHHHHHHHHHHHHh
Q 015903 137 NHTVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLG--------FGFSEKP--QPGYGFD-YTLDEYVASLESFVNEI 204 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~~~L~~-g~~Vi~~D~rG--------~G~S~~~--~~~~~~~-~~~~~~~~dl~~~l~~l 204 (398)
-|.|+|.-|.++ .++.|+. ||+|+..|+-= .|..-.. .-..+.- -+.+.+.+-+.+.++..
T Consensus 252 vPmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~f 324 (359)
T KOG2872|consen 252 VPMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDF 324 (359)
T ss_pred CceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHh
Confidence 388999988764 3556666 99999999741 1211000 0000111 24677778888999999
Q ss_pred CCCcEE-EEEeC
Q 015903 205 ANDKVS-LVVQG 215 (398)
Q Consensus 205 ~~~~v~-lvG~S 215 (398)
|.++.+ =+||.
T Consensus 325 G~~ryI~NLGHG 336 (359)
T KOG2872|consen 325 GKSRYIANLGHG 336 (359)
T ss_pred CccceEEecCCC
Confidence 866543 34654
No 283
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=30.27 E-value=64 Score=26.18 Aligned_cols=30 Identities=13% Similarity=-0.124 Sum_probs=22.1
Q ss_pred HHHHHhCCCcEEEEEeCcChHHHHHHHHhC
Q 015903 199 SFVNEIANDKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 199 ~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
..+++.+...-.++|-|.|+.++..++...
T Consensus 20 ~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 333444555567899999999999998643
No 284
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=29.68 E-value=62 Score=20.02 Aligned_cols=27 Identities=15% Similarity=0.258 Sum_probs=23.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEEE
Q 015903 187 DYTLDEYVASLESFVNEIANDKVSLVV 213 (398)
Q Consensus 187 ~~~~~~~~~dl~~~l~~l~~~~v~lvG 213 (398)
.+..+.|..|+...|..+.+..++++|
T Consensus 5 ~w~PqSWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 5 AWHPQSWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred ccCcHHHHHHHHHHHhcceeeeEEecc
Confidence 466788999999999999888999887
No 285
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=29.55 E-value=48 Score=32.65 Aligned_cols=31 Identities=6% Similarity=-0.146 Sum_probs=24.4
Q ss_pred HHHH-HHhCCCcEEEEEeCcChHHHHHHHHhC
Q 015903 198 ESFV-NEIANDKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 198 ~~~l-~~l~~~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
.+++ +..|+++-.++|||+|=+.|+..|.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3444 467899999999999998888877644
No 286
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=28.57 E-value=36 Score=30.50 Aligned_cols=23 Identities=26% Similarity=0.459 Sum_probs=19.1
Q ss_pred eccCCCCCEEEEecCCCCCccch
Q 015903 131 ESGNADNHTVLLIHGFPSQAYSY 153 (398)
Q Consensus 131 ~~g~~~~p~vvllHG~~~~~~~~ 153 (398)
..+.+.+|.++=+||+.|+...|
T Consensus 103 ~n~~p~KPLvLSfHG~tGTGKN~ 125 (344)
T KOG2170|consen 103 ANPNPRKPLVLSFHGWTGTGKNY 125 (344)
T ss_pred cCCCCCCCeEEEecCCCCCchhH
Confidence 33556789999999999998887
No 287
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=28.05 E-value=66 Score=28.28 Aligned_cols=15 Identities=7% Similarity=-0.057 Sum_probs=12.3
Q ss_pred CCCcEEEEEeCcChH
Q 015903 205 ANDKVSLVVQGYFSP 219 (398)
Q Consensus 205 ~~~~v~lvG~S~Gg~ 219 (398)
+.+.|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 357899999999964
No 288
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=27.98 E-value=3.4e+02 Score=22.64 Aligned_cols=70 Identities=21% Similarity=0.261 Sum_probs=45.9
Q ss_pred hHhhhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCC--Cccc
Q 015903 157 LPVLSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASKHK--DKLK 233 (398)
Q Consensus 157 ~~~L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p--~~v~ 233 (398)
.+.+.+ +++++.+|-+|... .-.+..+.+..+++......++++=-+..+.-.+..+..+- -.+.
T Consensus 76 l~~~~~~~~D~vlIDT~Gr~~------------~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~ 143 (196)
T PF00448_consen 76 LEKFRKKGYDLVLIDTAGRSP------------RDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGID 143 (196)
T ss_dssp HHHHHHTTSSEEEEEE-SSSS------------THHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTC
T ss_pred HHHHhhcCCCEEEEecCCcch------------hhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCc
Confidence 333433 89999999987642 24667788888888887777777765655556655444432 2478
Q ss_pred eEEEE
Q 015903 234 DLILL 238 (398)
Q Consensus 234 ~lvl~ 238 (398)
++|+.
T Consensus 144 ~lIlT 148 (196)
T PF00448_consen 144 GLILT 148 (196)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 88864
No 289
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=26.17 E-value=1e+02 Score=25.81 Aligned_cols=40 Identities=23% Similarity=0.246 Sum_probs=23.8
Q ss_pred CCEEEEecCCCCCcc---chhhhhHhhhc-CCeEEEEcCCCCCC
Q 015903 137 NHTVLLIHGFPSQAY---SYRKVLPVLSK-NYHAIAFDWLGFGF 176 (398)
Q Consensus 137 ~p~vvllHG~~~~~~---~~~~~~~~L~~-g~~Vi~~D~rG~G~ 176 (398)
.++++++||.....- .-..+...|.+ |..+...-++|.|.
T Consensus 144 ~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 144 KPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp GSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS
T ss_pred CCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 689999999865432 22445566666 65555555554443
No 290
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=26.16 E-value=79 Score=27.81 Aligned_cols=33 Identities=9% Similarity=-0.137 Sum_probs=23.5
Q ss_pred HHHHHHhCCC-cEEEEEeCcChHHHHHHHHhCCC
Q 015903 198 ESFVNEIAND-KVSLVVQGYFSPVVVKYASKHKD 230 (398)
Q Consensus 198 ~~~l~~l~~~-~v~lvG~S~Gg~ia~~~a~~~p~ 230 (398)
...+.+.++. -=.++|.|.|+.++..++...+.
T Consensus 17 l~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 17 LDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 3333444555 34788999999999999987654
No 291
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=25.78 E-value=47 Score=31.64 Aligned_cols=33 Identities=9% Similarity=-0.100 Sum_probs=24.5
Q ss_pred HHHHhCCCcEEEEEeCcChHHHHHHHHhCCCcc
Q 015903 200 FVNEIANDKVSLVVQGYFSPVVVKYASKHKDKL 232 (398)
Q Consensus 200 ~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v 232 (398)
.+.+.++.+-++.|-|.|+.+|..++...++.+
T Consensus 94 aL~E~gl~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 94 ALFEANLLPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 333346666679999999999999998665543
No 292
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=25.57 E-value=1.6e+02 Score=17.53 Aligned_cols=18 Identities=33% Similarity=0.516 Sum_probs=12.8
Q ss_pred HHHHHHHHHhCCCcEEEE
Q 015903 195 ASLESFVNEIANDKVSLV 212 (398)
Q Consensus 195 ~dl~~~l~~l~~~~v~lv 212 (398)
+++..+++.++.++++++
T Consensus 21 ~~L~~~i~~~~p~~vilV 38 (43)
T PF07521_consen 21 EELLEFIEQLNPRKVILV 38 (43)
T ss_dssp HHHHHHHHHHCSSEEEEE
T ss_pred HHHHHHHHhcCCCEEEEe
Confidence 567777777777777665
No 293
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=25.57 E-value=2.5e+02 Score=23.83 Aligned_cols=59 Identities=17% Similarity=0.278 Sum_probs=34.1
Q ss_pred CCEEEEecCCCCCccchhhhhH-hhhc-CC-eEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEE
Q 015903 137 NHTVLLIHGFPSQAYSYRKVLP-VLSK-NY-HAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLV 212 (398)
Q Consensus 137 ~p~vvllHG~~~~~~~~~~~~~-~L~~-g~-~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lv 212 (398)
..+|++.||...++......++ .|.+ || .|++...-|+- .. +++.+-++.-+.+.+.|+
T Consensus 138 e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP-------------~~----d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 138 EILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP-------------LV----DTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC-------------cH----HHHHHHHHHcCCceEEEe
Confidence 4578889998876665444444 3444 77 66666554331 12 334445555567766654
No 294
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=25.48 E-value=1.1e+02 Score=27.80 Aligned_cols=19 Identities=0% Similarity=-0.193 Sum_probs=16.3
Q ss_pred EEEEeCcChHHHHHHHHhC
Q 015903 210 SLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 210 ~lvG~S~Gg~ia~~~a~~~ 228 (398)
.+.|.|.||.+|+.++...
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 4779999999999999744
No 295
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=24.83 E-value=90 Score=21.53 Aligned_cols=24 Identities=13% Similarity=0.026 Sum_probs=17.7
Q ss_pred CCCcEEEEEeCcChHHHHHHHHhC
Q 015903 205 ANDKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 205 ~~~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
+.+++-++|-|-|=.+|.+.+..+
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCceEEEEecCCcccHHHHHHHHh
Confidence 457899999999977887777665
No 296
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=24.79 E-value=82 Score=27.15 Aligned_cols=32 Identities=19% Similarity=-0.112 Sum_probs=23.0
Q ss_pred HHHHHHhCCC--cEEEEEeCcChHHHHHHHHhCC
Q 015903 198 ESFVNEIAND--KVSLVVQGYFSPVVVKYASKHK 229 (398)
Q Consensus 198 ~~~l~~l~~~--~v~lvG~S~Gg~ia~~~a~~~p 229 (398)
.+.+.+.++. .-.++|-|.|+.++..++...+
T Consensus 18 l~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 18 LSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 3344444554 3479999999999999998653
No 297
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=24.33 E-value=3.8e+02 Score=25.31 Aligned_cols=72 Identities=15% Similarity=0.097 Sum_probs=39.9
Q ss_pred CEEEEecCCCCCc---cchhhhhHhhhc-CCeEEEEcCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCCc
Q 015903 138 HTVLLIHGFPSQA---YSYRKVLPVLSK-NYHAIAFDWLG--FGFSEKPQPGYGFDYTLDEYVASLESFVNE---IANDK 208 (398)
Q Consensus 138 p~vvllHG~~~~~---~~~~~~~~~L~~-g~~Vi~~D~rG--~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~---l~~~~ 208 (398)
.+||+++-..... ......+..|.+ |+.|+-+..-- ||.... +...+.+++.+.+...+.. +..++
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~-----g~~~~~~~i~~~v~~~~~~~~~~~~~~ 187 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGK-----GRLAEPETIVKAAEREFSPKEDLEGKR 187 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccC-----CCCCCHHHHHHHHHHHHhhccccCCce
Confidence 3566666543222 233455566666 77776655221 233322 2235678888888877654 44456
Q ss_pred EEEEEe
Q 015903 209 VSLVVQ 214 (398)
Q Consensus 209 v~lvG~ 214 (398)
+.+.|.
T Consensus 188 vlit~g 193 (390)
T TIGR00521 188 VLITAG 193 (390)
T ss_pred EEEecC
Confidence 767666
No 298
>PRK14974 cell division protein FtsY; Provisional
Probab=24.30 E-value=4.6e+02 Score=24.13 Aligned_cols=65 Identities=17% Similarity=0.148 Sum_probs=45.1
Q ss_pred cCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCC--CccceEEEE
Q 015903 162 KNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASKHK--DKLKDLILL 238 (398)
Q Consensus 162 ~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p--~~v~~lvl~ 238 (398)
.+++++.+|-.|.... -..+.+.+..+.+....+.++++.-+.-|.-++.-+..+. -.+.++|+.
T Consensus 221 ~~~DvVLIDTaGr~~~------------~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 221 RGIDVVLIDTAGRMHT------------DANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred CCCCEEEEECCCccCC------------cHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 4899999999876432 2455666777777777777778877777777776665543 256777764
No 299
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=23.08 E-value=64 Score=30.30 Aligned_cols=35 Identities=3% Similarity=-0.212 Sum_probs=25.4
Q ss_pred HHHHhCCCcEEEEEeCcChHHHHHHHHhCCCccce
Q 015903 200 FVNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKD 234 (398)
Q Consensus 200 ~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~ 234 (398)
.+.+.++.+=++.|-|.|+.+|..+|...++.+..
T Consensus 104 aL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~ 138 (391)
T cd07229 104 ALWLRGLLPRIITGTATGALIAALVGVHTDEELLR 138 (391)
T ss_pred HHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHH
Confidence 33444666667999999999999999865544433
No 300
>PF02540 NAD_synthase: NAD synthase; InterPro: IPR022310 NAD+ synthase (6.3.5.1 from EC) catalyzes the last step in the biosynthesis of nicotinamide adenine dinucleotide and is induced by stress factors such as heat shock and glucose limitation. The three-dimensional structure of NH3-dependent NAD+ synthetase from Bacillus subtilis, in its free form and in complex with ATP shows that the enzyme consists of a tight homodimer with alpha/beta subunit topology []. Catalyzes the synthesis of GMP from XMP. The protein is a homodimer, but in the archaea it is a heterodimer composed of a glutamine amidotransferase subunit (A) and a GMP-binding subunit (B). This entry contains the GMP-binding subunit (B). ; PDB: 2VXO_A 3UOW_B 3N05_A 2DPL_B 3A4I_A 3SEQ_D 3SZG_A 3SYT_A 3SDB_A 3SEZ_C ....
Probab=22.72 E-value=2.7e+02 Score=24.23 Aligned_cols=49 Identities=22% Similarity=0.224 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCcC--hHHHHHHHHh-C-CCccceEEEEC
Q 015903 190 LDEYVASLESFVNEIANDKVSLVVQGYF--SPVVVKYASK-H-KDKLKDLILLN 239 (398)
Q Consensus 190 ~~~~~~dl~~~l~~l~~~~v~lvG~S~G--g~ia~~~a~~-~-p~~v~~lvl~~ 239 (398)
++.+...|.+.++..+.++ +++|.|-| ..+++.+|.+ . |+++-++++-+
T Consensus 2 ~~~l~~~L~~~~~~~g~~~-vVvglSGGiDSav~A~La~~Alg~~~v~~v~mp~ 54 (242)
T PF02540_consen 2 IEALVDFLRDYVKKSGAKG-VVVGLSGGIDSAVVAALAVKALGPDNVLAVIMPS 54 (242)
T ss_dssp HHHHHHHHHHHHHHHTTSE-EEEEETSSHHHHHHHHHHHHHHGGGEEEEEEEES
T ss_pred HHHHHHHHHHHHHHhCCCe-EEEEcCCCCCHHHHHHHHHHHhhhcccccccccc
Confidence 3556777888888877655 47899999 3334444433 2 67788777753
No 301
>COG3933 Transcriptional antiterminator [Transcription]
Probab=22.63 E-value=4.8e+02 Score=25.02 Aligned_cols=75 Identities=17% Similarity=0.198 Sum_probs=54.9
Q ss_pred CEEEEecCCCCCccchhhhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcC
Q 015903 138 HTVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYF 217 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~G 217 (398)
..||+.||....+ +...++..|-..--+.++|+| .+.+..+..+.+.+.+++.+..+=.++=..||
T Consensus 110 ~vIiiAHG~sTAS-SmaevanrLL~~~~~~aiDMP-------------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMG 175 (470)
T COG3933 110 KVIIIAHGYSTAS-SMAEVANRLLGEEIFIAIDMP-------------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMG 175 (470)
T ss_pred eEEEEecCcchHH-HHHHHHHHHhhccceeeecCC-------------CcCCHHHHHHHHHHHHHhcCccCceEEEEecc
Confidence 4789999986433 445666666656677899998 35678999999999999988777455566899
Q ss_pred hHHHHHHHH
Q 015903 218 SPVVVKYAS 226 (398)
Q Consensus 218 g~ia~~~a~ 226 (398)
......-..
T Consensus 176 SL~~f~~~i 184 (470)
T COG3933 176 SLTSFGSII 184 (470)
T ss_pred hHHHHHHHH
Confidence 876655443
No 302
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=22.34 E-value=3.3e+02 Score=22.13 Aligned_cols=52 Identities=23% Similarity=0.191 Sum_probs=36.3
Q ss_pred hhc-CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcC
Q 015903 160 LSK-NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYF 217 (398)
Q Consensus 160 L~~-g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~G 217 (398)
|.+ |++.+.+|.=++=-.... ..-..++.+.+.++.+..+.++++|+.-|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYE------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCc------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 656 999999998765222111 1224567777777777767679999999986
No 303
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=22.07 E-value=2.5e+02 Score=22.44 Aligned_cols=50 Identities=18% Similarity=0.270 Sum_probs=33.6
Q ss_pred hhhHhhhcCCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcCh
Q 015903 155 KVLPVLSKNYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFS 218 (398)
Q Consensus 155 ~~~~~L~~g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg 218 (398)
.+...+. +-.||+.|-+|- ..+-.++++.+..+.+. +.+-++++|.+.|=
T Consensus 58 ~il~~~~-~~~~i~LDe~Gk------------~~sS~~fA~~l~~~~~~-g~~i~FvIGGa~G~ 107 (153)
T TIGR00246 58 RILAAIG-KAHVVTLDIPGK------------PWTTPQLADTLEKWKTD-GRDVTLLIGGPEGL 107 (153)
T ss_pred HHHHhCC-CCeEEEEcCCCC------------cCCHHHHHHHHHHHhcc-CCeEEEEEcCCCcC
Confidence 3444444 467999999874 35567888888776443 33456788999884
No 304
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=21.73 E-value=5.7e+02 Score=22.67 Aligned_cols=74 Identities=14% Similarity=0.218 Sum_probs=46.7
Q ss_pred hhhhhHhhhc--CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEE-EeCcChHHHHHHHHhCC
Q 015903 153 YRKVLPVLSK--NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLV-VQGYFSPVVVKYASKHK 229 (398)
Q Consensus 153 ~~~~~~~L~~--g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lv-G~S~Gg~ia~~~a~~~p 229 (398)
....+..+.+ ++.++.+|-+|.... -.+..+.+.++++......++++ .-++++.-+...+.++.
T Consensus 142 l~~~l~~l~~~~~~D~ViIDt~Gr~~~------------~~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~ 209 (270)
T PRK06731 142 MTRALTYFKEEARVDYILIDTAGKNYR------------ASETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFK 209 (270)
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCCcC------------CHHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhC
Confidence 3444455554 799999999987432 13344555566666555556655 45677877777777753
Q ss_pred -CccceEEEE
Q 015903 230 -DKLKDLILL 238 (398)
Q Consensus 230 -~~v~~lvl~ 238 (398)
-.+.++|+.
T Consensus 210 ~~~~~~~I~T 219 (270)
T PRK06731 210 DIHIDGIVFT 219 (270)
T ss_pred CCCCCEEEEE
Confidence 357777763
No 305
>PRK04148 hypothetical protein; Provisional
Probab=21.46 E-value=1.5e+02 Score=23.09 Aligned_cols=31 Identities=23% Similarity=0.342 Sum_probs=21.3
Q ss_pred CCcEEEEEeCcChHHHHHHHHhCCCccceEEEECC
Q 015903 206 NDKVSLVVQGYFSPVVVKYASKHKDKLKDLILLNP 240 (398)
Q Consensus 206 ~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 240 (398)
..++..+|..+|..+|..++... .-++.++-
T Consensus 17 ~~kileIG~GfG~~vA~~L~~~G----~~ViaIDi 47 (134)
T PRK04148 17 NKKIVELGIGFYFKVAKKLKESG----FDVIVIDI 47 (134)
T ss_pred CCEEEEEEecCCHHHHHHHHHCC----CEEEEEEC
Confidence 35799999998887888877432 24555553
No 306
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.14 E-value=1.5e+02 Score=22.35 Aligned_cols=32 Identities=19% Similarity=0.115 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEeCcChHHHH
Q 015903 191 DEYVASLESFVNEIANDKVSLVVQGYFSPVVV 222 (398)
Q Consensus 191 ~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~ 222 (398)
.+....++..+..++.+.++++||+--|.+..
T Consensus 43 ~~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 43 LDVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred ccHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 35667788888999999999999987776554
No 307
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=21.11 E-value=1.2e+02 Score=26.40 Aligned_cols=20 Identities=5% Similarity=-0.207 Sum_probs=17.7
Q ss_pred EEEEeCcChHHHHHHHHhCC
Q 015903 210 SLVVQGYFSPVVVKYASKHK 229 (398)
Q Consensus 210 ~lvG~S~Gg~ia~~~a~~~p 229 (398)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 78999999999999998653
No 308
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=21.05 E-value=5.2e+02 Score=24.77 Aligned_cols=65 Identities=22% Similarity=0.264 Sum_probs=51.1
Q ss_pred CCeEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCcChHHHHHHHHhCCC--ccceEEEEC
Q 015903 163 NYHAIAFDWLGFGFSEKPQPGYGFDYTLDEYVASLESFVNEIANDKVSLVVQGYFSPVVVKYASKHKD--KLKDLILLN 239 (398)
Q Consensus 163 g~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~ 239 (398)
+|+|+.+|--|. ...-+++.+.+.++-+.+.++.+.+|--++=|.-|...|..+-+ .+.++|+.-
T Consensus 182 ~~DvvIvDTAGR------------l~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlTK 248 (451)
T COG0541 182 GYDVVIVDTAGR------------LHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILTK 248 (451)
T ss_pred CCCEEEEeCCCc------------ccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEEc
Confidence 677777776542 12247788888888888999999999999999999999988766 377888763
No 309
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=20.88 E-value=64 Score=30.57 Aligned_cols=35 Identities=14% Similarity=0.018 Sum_probs=25.7
Q ss_pred HHHhCCCcEEEEEeCcChHHHHHHHHhCCCccceE
Q 015903 201 VNEIANDKVSLVVQGYFSPVVVKYASKHKDKLKDL 235 (398)
Q Consensus 201 l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~l 235 (398)
+.+.+..+-++.|-|.|+.+|..++...++.+..+
T Consensus 89 L~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 89 LLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 33346666679999999999999998665555443
No 310
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=20.68 E-value=2.4e+02 Score=28.03 Aligned_cols=100 Identities=14% Similarity=0.160 Sum_probs=52.3
Q ss_pred CEEEEecCCCCCccchhhhh--------Hhhhc-CCeEEEEcCCC----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 015903 138 HTVLLIHGFPSQAYSYRKVL--------PVLSK-NYHAIAFDWLG----FGFSEKPQPGYGFDYTLDEYVASLESFVNEI 204 (398)
Q Consensus 138 p~vvllHG~~~~~~~~~~~~--------~~L~~-g~~Vi~~D~rG----~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l 204 (398)
-++=+-=|.+-+......+. ..|.+ |=.|+.-.--| +|+-+.+.... .......+...+.+.+..
T Consensus 259 ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekr-TRvRaRvis~al~d~i~e- 336 (655)
T COG3887 259 IPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKR-TRVRARVISTALSDIIKE- 336 (655)
T ss_pred cceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHh-HHHHHHHHHHHHHHHHhh-
Confidence 45556666665444433222 23444 45555553333 34433332210 011223333344444443
Q ss_pred CCCcEEEEEe------CcChHHHHHHHHhCCCccceEEEECCc
Q 015903 205 ANDKVSLVVQ------GYFSPVVVKYASKHKDKLKDLILLNPP 241 (398)
Q Consensus 205 ~~~~v~lvG~------S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 241 (398)
.++|+++|| +.|+.+++..-+..-.+ .+.+.++|.
T Consensus 337 -~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 337 -SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred -cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 679999999 68999998866554444 667777763
No 311
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=20.37 E-value=66 Score=29.20 Aligned_cols=29 Identities=14% Similarity=-0.129 Sum_probs=21.9
Q ss_pred HHHHhCCCcEEEEEeCcChHHHHHHHHhC
Q 015903 200 FVNEIANDKVSLVVQGYFSPVVVKYASKH 228 (398)
Q Consensus 200 ~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~ 228 (398)
.+.+.++.+-++.|-|.|+.+|..++...
T Consensus 89 aL~e~gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 89 TLVEHQLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 33344666667999999999999998643
Done!