Query 015905
Match_columns 398
No_of_seqs 197 out of 1635
Neff 6.5
Searched_HMMs 13730
Date Mon Mar 25 04:34:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015905.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015905hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wuwa_ g.13.1.1 (A:) Hordothi 6.1 81 0.0059 19.8 0.9 11 41-51 35-45 (45)
2 d1fi4a1 d.14.1.5 (A:3-190) Mev 4.9 1.5E+02 0.011 23.9 2.2 15 29-43 24-38 (188)
3 d1m6ex_ c.66.1.35 (X:) Salicyl 4.2 2.4E+02 0.017 25.1 3.1 25 30-55 133-157 (359)
4 d1r1ga_ g.3.7.2 (A:) Neurotoxi 4.0 80 0.0058 17.7 -0.3 7 39-45 16-22 (31)
5 d1kf6c_ f.21.2.2 (C:) Fumarate 3.8 2.2E+02 0.016 21.8 2.1 46 103-151 26-71 (130)
6 d2nwwa1 f.49.1.1 (A:12-416) Pr 3.8 1.1E+03 0.078 20.1 18.4 52 112-169 6-57 (405)
7 d1y5ic1 f.21.3.1 (C:1-225) Res 3.3 9.5E+02 0.07 18.7 7.5 12 259-270 105-116 (225)
8 d2fc6a1 g.66.1.1 (A:8-44) Targ 3.1 1.1E+02 0.0081 18.3 -0.3 9 39-47 18-27 (37)
9 d2h4oa1 d.368.1.1 (A:2-63) Unc 3.0 1.4E+02 0.01 19.1 0.2 19 10-28 36-54 (62)
10 d2pf5a1 d.169.1.4 (A:1-95) TSG 2.7 2.4E+02 0.017 20.1 1.2 21 46-67 56-76 (95)
No 1
>d1wuwa_ g.13.1.1 (A:) Hordothionin {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=6.15 E-value=81 Score=19.83 Aligned_cols=11 Identities=36% Similarity=0.595 Sum_probs=9.0
Q ss_pred ccCcccccccc
Q 015905 41 STSWCPVHFRS 51 (398)
Q Consensus 41 ~~~~~~~~~~~ 51 (398)
|.++||-+||.
T Consensus 35 s~~~CP~dyPk 45 (45)
T d1wuwa_ 35 SGLKCPSSFPK 45 (45)
T ss_dssp SSSSCCTTSCC
T ss_pred cCCcCCCCCCC
Confidence 56899999984
No 2
>d1fi4a1 d.14.1.5 (A:3-190) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=4.92 E-value=1.5e+02 Score=23.93 Aligned_cols=15 Identities=40% Similarity=0.403 Sum_probs=11.8
Q ss_pred ccccCCCCCcccccC
Q 015905 29 IPVLPRNRSLSFSTS 43 (398)
Q Consensus 29 ~~~~~~~~~~~~~~~ 43 (398)
-.++|-|.|+||.-+
T Consensus 24 ~~~lP~n~SiS~TL~ 38 (188)
T d1fi4a1 24 KLNLPTNSSISVTLS 38 (188)
T ss_dssp TTTEESSCEEEEEBC
T ss_pred ccCCCCCCeEEEEec
Confidence 357899999998663
No 3
>d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]}
Probab=4.20 E-value=2.4e+02 Score=25.08 Aligned_cols=25 Identities=28% Similarity=0.329 Sum_probs=20.4
Q ss_pred cccCCCCCcccccCccccccccccCC
Q 015905 30 PVLPRNRSLSFSTSWCPVHFRSISHS 55 (398)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 (398)
+.||+|| +.|--+.+++|+=+..|.
T Consensus 133 rLfP~~S-lh~~~Ss~alHWLS~vP~ 157 (359)
T d1m6ex_ 133 RLFPRNT-LHFIHSSYSLMWLSQVPI 157 (359)
T ss_dssp CCSCTTC-BSCEEEESCTTBCSSCCS
T ss_pred hcCCCCc-eEEeeehhhhhhhhcCCc
Confidence 6789887 888888999999776654
No 4
>d1r1ga_ g.3.7.2 (A:) Neurotoxin bmk37 {Chinese scorpion (Buthus martensi karsch) [TaxId: 34649]}
Probab=4.02 E-value=80 Score=17.75 Aligned_cols=7 Identities=43% Similarity=0.928 Sum_probs=5.1
Q ss_pred ccccCcc
Q 015905 39 SFSTSWC 45 (398)
Q Consensus 39 ~~~~~~~ 45 (398)
-|||++|
T Consensus 16 gfssgkc 22 (31)
T d1r1ga_ 16 GFSSGKC 22 (31)
T ss_dssp TCSEEEE
T ss_pred ecccCcE
Confidence 4788776
No 5
>d1kf6c_ f.21.2.2 (C:) Fumarate reductase subunit FrdC {Escherichia coli [TaxId: 562]}
Probab=3.81 E-value=2.2e+02 Score=21.80 Aligned_cols=46 Identities=9% Similarity=0.143 Sum_probs=23.1
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhcCCCCcccccCHHHHHHHHhchhHHHH
Q 015905 103 ILKQSNSFLPHVVLGSTMLALVFPPSFTWFTASEKDFIEAFKRPAAIFA 151 (398)
Q Consensus 103 ~l~~~~~~l~~~il~~~~lg~~~P~~~~~l~l~~~dl~~~l~~P~~l~~ 151 (398)
|++........|..+..+.|++.=..+ .-..+++.+.+++|..+++
T Consensus 26 MlRE~T~v~~~~f~lvLl~Gl~~L~~g---~~aw~~fv~flqnP~vv~l 71 (130)
T d1kf6c_ 26 MLREGTAVPAVWFSIELIFGLFALKNG---PEAWAGFVDFLQNPVIVII 71 (130)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHTH---HHHHHHHHHHHTSSHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHhCcHHHHH
Confidence 566666655555555555555431000 0133556666666655444
No 6
>d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]}
Probab=3.81 E-value=1.1e+03 Score=20.11 Aligned_cols=52 Identities=10% Similarity=-0.043 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhhcCCCCcccccCHHHHHHHHhchhHHHHHHHHHHhHHHHHHHHHHh
Q 015905 112 PHVVLGSTMLALVFPPSFTWFTASEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGT 169 (398)
Q Consensus 112 ~~~il~~~~lg~~~P~~~~~l~l~~~dl~~~l~~P~~l~~gl~~qfvimPlla~~l~~ 169 (398)
.+-+.+++++|..+|+... .+.....++-+.-+ ..-+.|.++.|++...+..
T Consensus 6 li~lv~Gi~~G~~~~~~~~-----~~~~~~~l~~~g~l-Fi~lL~m~v~PLIf~sii~ 57 (405)
T d2nwwa1 6 LIGLILGAIVGLILGHYGY-----AHAVHTYVKPFGDL-FVRLLKMLVMPIVFASLVV 57 (405)
T ss_dssp HHHHHHHHHHHHHHHTTTT-----HHHHTTTTHHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHccccc-----hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 4557778888888865421 11222222222233 3345689999999888763
No 7
>d1y5ic1 f.21.3.1 (C:1-225) Respiratory nitrate reductase 1 gamma chain {Escherichia coli [TaxId: 562]}
Probab=3.33 E-value=9.5e+02 Score=18.68 Aligned_cols=12 Identities=33% Similarity=0.434 Sum_probs=6.3
Q ss_pred HHHHHHHHHhHH
Q 015905 259 AAGLLLNRFFPR 270 (398)
Q Consensus 259 ~lG~llr~~~p~ 270 (398)
+++.+.||+..+
T Consensus 105 ~~~ll~RR~~~~ 116 (225)
T d1y5ic1 105 GVLLLKRRLFSP 116 (225)
T ss_dssp HHHHHHHHHHSH
T ss_pred HHHHHHHHHhcC
Confidence 344556666443
No 8
>d2fc6a1 g.66.1.1 (A:8-44) Target of EGR1 protein 1, TOE1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.06 E-value=1.1e+02 Score=18.27 Aligned_cols=9 Identities=56% Similarity=1.708 Sum_probs=7.6
Q ss_pred cccc-Ccccc
Q 015905 39 SFST-SWCPV 47 (398)
Q Consensus 39 ~~~~-~~~~~ 47 (398)
.||- +|||.
T Consensus 18 ~FsAyGWCP~ 27 (37)
T d2fc6a1 18 NFSAYGWCPL 27 (37)
T ss_dssp HHHHTCCCTT
T ss_pred hhhhccccCC
Confidence 5998 99985
No 9
>d2h4oa1 d.368.1.1 (A:2-63) Uncharacterized protein YonK {Bacillus subtilis [TaxId: 1423]}
Probab=3.04 E-value=1.4e+02 Score=19.09 Aligned_cols=19 Identities=37% Similarity=0.520 Sum_probs=14.9
Q ss_pred HHhhhcccceeeEEeeccc
Q 015905 10 AQRSRFNSKTFSLTISKHN 28 (398)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~ 28 (398)
.--|.||.|..|+|....|
T Consensus 36 eilsefngknvsitvkeen 54 (62)
T d2h4oa1 36 EILSEFNGKNVSITVKEEN 54 (62)
T ss_dssp HHHHTTTTSCCCCCCCCCC
T ss_pred HHHHHhCCCeeEEEeeccc
Confidence 4468999999999886654
No 10
>d2pf5a1 d.169.1.4 (A:1-95) TSG-6, Link module {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.67 E-value=2.4e+02 Score=20.11 Aligned_cols=21 Identities=5% Similarity=-0.159 Sum_probs=8.7
Q ss_pred ccccccccCCccccCCccceee
Q 015905 46 PVHFRSISHSNLKFGSSRNFVT 67 (398)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~ 67 (398)
++.||..++-..|.+ ++.+.|
T Consensus 56 ~v~yP~~~p~~~Cg~-~~~GV~ 76 (95)
T d2pf5a1 56 RVGYPIVKPGPNCGF-GKTGII 76 (95)
T ss_dssp EEEEEESCC--------CCEEE
T ss_pred eEEeeeecCCCCCCC-CCCCEe
Confidence 577887765444544 444444
Done!