BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 015906
         (398 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8GYX9|WDL1_ARATH Protein WVD2-like 1 OS=Arabidopsis thaliana GN=WDL1 PE=2 SV=1
          Length = 286

 Score =  175 bits (444), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 101/176 (57%), Positives = 128/176 (72%), Gaps = 4/176 (2%)

Query: 170 RHLNSK--KQNQPPLVPRKPLQPNNKKLPDEEDSCSVASSTAASVRTVKSRIIVAAAPTF 227
           R+ N+K  KQ+ P L  RKPLQP NKK  D+ED+CS+ASS A S+R  KS +   +APTF
Sbjct: 69  RNGNAKVSKQDAPLLAVRKPLQPENKKHIDDEDNCSIASSVATSMRMGKSGLTYGSAPTF 128

Query: 228 RCTERAEKRKEFYSKLEEKHQALEAEKSQSEARTKEETEAAIKQLRKSLTFKASPMPSFY 287
           R  +RAEKRKE+Y KLEEK+QALEAE+++ E R K+E EAA+KQLRK+L FKA P+P+FY
Sbjct: 129 RSAQRAEKRKEYYQKLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKAKPVPNFY 188

Query: 288 HDGPPPKVELKKMPPTRAKSPK--LGRRKSCSDAASLNQGDQVKGTSRTGNRQSLG 341
           ++ PP K ELKK+P TR KSPK  L RRKS SDA S +  +++  T    NR S G
Sbjct: 189 YEAPPAKPELKKLPLTRPKSPKLILSRRKSFSDAVSSSSREEILKTVSNRNRHSTG 244


>sp|Q84ZT9|WVD2_ARATH Protein WAVE-DAMPENED 2 OS=Arabidopsis thaliana GN=WVD2 PE=2 SV=1
          Length = 202

 Score =  156 bits (394), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/150 (59%), Positives = 107/150 (71%), Gaps = 10/150 (6%)

Query: 193 KKLPDEEDSCSVASSTAASVRTVKSRIIVAAAPTFRCTERAEKRKEFYSKLEEKHQALEA 252
           KK  DEED CSVASS    ++  KS++    AP FR  +RAEKRKE+Y KLEEKHQALEA
Sbjct: 59  KKNLDEEDDCSVASS----MKNAKSKVTHGTAPRFRSAQRAEKRKEYYQKLEEKHQALEA 114

Query: 253 EKSQSEARTKEETEAAIKQLRKSLTFKASPMPSFYHDGPPPKVELKKMPPTRAKSPKLG- 311
           E+ + E R KEE EAAIKQLRK+L FKA+P+P FY+  PP K ELKK P TR KSPKL  
Sbjct: 115 ERIELEQRQKEEQEAAIKQLRKNLKFKANPVPDFYYQRPPVKPELKKFPLTRPKSPKLNL 174

Query: 312 -RRKSCSDAASLNQGDQVKGTSRTGNRQSL 340
            RRKSCSDA + + G++    S + NRQS+
Sbjct: 175 SRRKSCSDAIT-SSGEE---NSNSQNRQSV 200


>sp|F4I2H7|TPX2_ARATH Protein TPX2 OS=Arabidopsis thaliana GN=TPX2 PE=1 SV=1
          Length = 790

 Score = 38.9 bits (89), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 232 RAEKRKEFYSKLEEKHQALEAEKSQSEARTKEETEAAIKQLRKSLTFKASPMPSFYHDGP 291
           RA +R +F  K++EK    +  + +SEA    E E A+KQ+RK++   A P+P+F     
Sbjct: 654 RAVERADFDHKIKEKENQYKRYREESEAAKMVEEERALKQMRKTMVPHARPVPNFNKPFL 713

Query: 292 PPKVELKKMPPTRAKSPKL 310
           P K        T+AKSP L
Sbjct: 714 PQKSNKGT---TKAKSPNL 729


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.307    0.124    0.345 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,513,592
Number of Sequences: 539616
Number of extensions: 6341633
Number of successful extensions: 24483
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 476
Number of HSP's that attempted gapping in prelim test: 23685
Number of HSP's gapped (non-prelim): 1086
length of query: 398
length of database: 191,569,459
effective HSP length: 120
effective length of query: 278
effective length of database: 126,815,539
effective search space: 35254719842
effective search space used: 35254719842
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 62 (28.5 bits)