BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on

Query Sequence

>015907
MTAISATAAASGLLAFRIQCSDSKPRRGFGNKTDKTNKEEKKGVMSQPKRKSLSKQSGSL
PTQAPFLSSGYNSKSNNSSSDINFEERLAAVRRSALEQKKAEEIKEFGPIDYDAPIETEK
KTIGLGTKIGVGVAVVIFGLVFALGDFLPSGSVSPTEEAGVVNKELSEEEKNVLQTRLKK
YEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKYELK
DYEGSAAAYRVSTMVSKDINFEVLRGLTNALLAAKKPDEAVQFLLASRERLSTGKSDDLS
VKDGRSGDKKETEPQKVDPIQVELLLGKAYSDGGRVSDAVAVYDRLISSYPNDFRGYLAK
GIILKENGKVGDAERMFIQARFFAPEKVKALVDQYSKR

High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with GSU1987 GSU1987 GSU1987 TPR domain lipoprotein	protein from Geobacter sulfurreducens PCA	3.1e-05
BLAST match view associations BLAST with GSU_1987 GSU_1987 GSU_1987 TPR domain protein	protein from Geobacter sulfurreducens PCA	3.1e-05
BLAST match view associations BLAST with AT2G37400 AT2G37400 AT2G37400	protein from Arabidopsis thaliana	0.00012
BLAST match view associations BLAST with CPS_0528 CPS_0528 CPS_0528 TPR domain protein	protein from Colwellia psychrerythraea 34H	0.00067
BLAST match view associations BLAST with CPS_0528 CPS_0528 CPS_0528 TPR domain protein	protein from Colwellia psychrerythraea 34H	0.00067

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  015907
        (398 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q74BQ4 - symbol:GSU1987 "TPR domain lipoprotein...   132  3.1e-05   1
TIGR_CMR|GSU_1987 - symbol:GSU_1987 "TPR domain protein" ...   132  3.1e-05   1
TAIR|locus:2049741 - symbol:AT2G37400 "AT2G37400" species...   102  0.00012   2
UNIPROTKB|Q489H8 - symbol:CPS_0528 "TPR domain protein" s...   120  0.00067   1
TIGR_CMR|CPS_0528 - symbol:CPS_0528 "TPR domain protein" ...   120  0.00067   1


>UNIPROTKB|Q74BQ4 [details] [associations]
            symbol:GSU1987 "TPR domain lipoprotein" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
            PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
            GenomeReviews:AE017180_GR Gene3D:1.25.40.10 InterPro:IPR013105
            Pfam:PF07719 InterPro:IPR014266 TIGRFAMs:TIGR02917
            RefSeq:NP_953036.2 GeneID:2686148 KEGG:gsu:GSU1987 PATRIC:22026837
            HOGENOM:HOG000133886 ProtClustDB:CLSK828666
            BioCyc:GSUL243231:GH27-2005-MONOMER Uniprot:Q74BQ4
        Length = 896

 Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 55/226 (24%), Positives = 93/226 (41%)

Query:   178 LKKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKY 237
             L+ Y +  +++P D   L    V L E G+  +A    + L ++ P   +  RL G + Y
Sbjct:   217 LEIYRKVAALTPGDPAPLYRQGVILLEKGEMDKAEKTAETLVQKFPQKSEGARLKGLIAY 276

Query:   238 ELKDYEGSAAAYRVSTMVSKDINFEVLRGLT--------NALLAAKK-----PDEAVQFL 284
             + K+Y  +  A + S  ++  +      GL+        NAL   ++     PD     L
Sbjct:   277 QRKNYADAITALQTSVKIAPSLEGLYYLGLSMYSRGELENALSQFRRILDHTPDFVQARL 336

Query:   285 LASRERLSTGKSDDLSVKDGRSGDKKETEPQKVDPIQVELLLGKAYSDGGRVSDAVAVYD 344
             L +   L+  + DD   +  R+    ET+ +         +LG AY   G   + +   +
Sbjct:   337 LTALILLNQKRVDDAIAEANRA---IETDSRSA---LARNILGSAYLAKGMYDEGIRELN 390

Query:   345 RLISSYPNDFRGYLAKGIILKENGKVGDAERMFIQARFFAPEKVKA 390
             R     P     +L KGI     G+V +AE  F  A   APE + +
Sbjct:   391 RATELDPKIVDAHLKKGIFNLSKGRVREAESDFTTAVRVAPEMLNS 436


>TIGR_CMR|GSU_1987 [details] [associations]
            symbol:GSU_1987 "TPR domain protein" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
            PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
            GenomeReviews:AE017180_GR Gene3D:1.25.40.10 InterPro:IPR013105
            Pfam:PF07719 InterPro:IPR014266 TIGRFAMs:TIGR02917
            RefSeq:NP_953036.2 GeneID:2686148 KEGG:gsu:GSU1987 PATRIC:22026837
            HOGENOM:HOG000133886 ProtClustDB:CLSK828666
            BioCyc:GSUL243231:GH27-2005-MONOMER Uniprot:Q74BQ4
        Length = 896

 Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 55/226 (24%), Positives = 93/226 (41%)

Query:   178 LKKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKY 237
             L+ Y +  +++P D   L    V L E G+  +A    + L ++ P   +  RL G + Y
Sbjct:   217 LEIYRKVAALTPGDPAPLYRQGVILLEKGEMDKAEKTAETLVQKFPQKSEGARLKGLIAY 276

Query:   238 ELKDYEGSAAAYRVSTMVSKDINFEVLRGLT--------NALLAAKK-----PDEAVQFL 284
             + K+Y  +  A + S  ++  +      GL+        NAL   ++     PD     L
Sbjct:   277 QRKNYADAITALQTSVKIAPSLEGLYYLGLSMYSRGELENALSQFRRILDHTPDFVQARL 336

Query:   285 LASRERLSTGKSDDLSVKDGRSGDKKETEPQKVDPIQVELLLGKAYSDGGRVSDAVAVYD 344
             L +   L+  + DD   +  R+    ET+ +         +LG AY   G   + +   +
Sbjct:   337 LTALILLNQKRVDDAIAEANRA---IETDSRSA---LARNILGSAYLAKGMYDEGIRELN 390

Query:   345 RLISSYPNDFRGYLAKGIILKENGKVGDAERMFIQARFFAPEKVKA 390
             R     P     +L KGI     G+V +AE  F  A   APE + +
Sbjct:   391 RATELDPKIVDAHLKKGIFNLSKGRVREAESDFTTAVRVAPEMLNS 436


>TAIR|locus:2049741 [details] [associations]
            symbol:AT2G37400 "AT2G37400" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0009543 "chloroplast thylakoid
            lumen" evidence=ISS] [GO:0009941 "chloroplast envelope"
            evidence=IDA] [GO:0006626 "protein targeting to mitochondrion"
            evidence=RCA] [GO:0009536 "plastid" evidence=IDA]
            InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
            PROSITE:PS50005 PROSITE:PS50293 EMBL:CP002685 GO:GO:0009941
            EMBL:AC005896 Gene3D:1.25.40.10 ProtClustDB:CLSN2688749
            EMBL:BT028932 IPI:IPI00530439 PIR:C84792 RefSeq:NP_565860.1
            UniGene:At.37429 ProteinModelPortal:Q9ZUS6 SMR:Q9ZUS6 STRING:Q9ZUS6
            PRIDE:Q9ZUS6 EnsemblPlants:AT2G37400.1 GeneID:818316
            KEGG:ath:AT2G37400 TAIR:At2g37400 InParanoid:Q9ZUS6 OMA:LKANIFS
            PhylomeDB:Q9ZUS6 ArrayExpress:Q9ZUS6 Genevestigator:Q9ZUS6
            Uniprot:Q9ZUS6
        Length = 333

 Score = 102 (41.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
 Identities = 27/93 (29%), Positives = 48/93 (51%)

Query:   297 DDLSVKDGRSGD---KKETEPQKVDPIQVELLLGKAYSDGGRVSDAVAVYDRLISSYPND 353
             DDL+  + R  +   + + E  + D    +LL+ +     G+ ++A+ +Y+ L+   P D
Sbjct:   213 DDLNAVEKRIEEAMVRCKKEKNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRD 272

Query:   354 FRGYLAKGIILKENGKVGDAERMFIQARFFAPE 386
             FR YL +GII     K  +AE+ F + R   P+
Sbjct:   273 FRPYLCQGIIYTVLKKENEAEKQFEKFRRLVPK 305

 Score = 60 (26.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
 Identities = 25/123 (20%), Positives = 46/123 (37%)

Query:   149 PSGSVSPTEEAGVVNKELSEEEKNV-LQTRLKKYEETLSISPKDSTALEGAAVTLAELGD 207
             PS +++    A  + + L +   NV  +   +  EE L+  P D  AL        +   
Sbjct:    86 PSPAIAAPVAATPLMESLKQSNGNVSFEEEERSLEEYLASHPDDVEALRSLMEVRIKSRK 145

Query:   208 YTRAVSLLQDLAKEKPSDPDVFRLLGEVKYELKDYEGSAAAYRVSTMVSKDINFEVLRGL 267
                A+ L+  L + +P + +   L   +     D E +   +    +V   +  E   GL
Sbjct:   146 LLEAIELIDRLIELEPEEKEWPMLKANIFSYSGDLESAKTGFE-EILVKDPLRVEAYHGL 204

Query:   268 TNA 270
               A
Sbjct:   205 VMA 207


>UNIPROTKB|Q489H8 [details] [associations]
            symbol:CPS_0528 "TPR domain protein" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
            SMART:SM00028 EMBL:CP000083 GenomeReviews:CP000083_GR
            Gene3D:1.25.40.10 eggNOG:NOG82907 InterPro:IPR014266
            TIGRFAMs:TIGR02917 RefSeq:YP_267286.1 ProteinModelPortal:Q489H8
            STRING:Q489H8 GeneID:3518486 KEGG:cps:CPS_0528 PATRIC:21464401
            HOGENOM:HOG000133966 OMA:KIERTES ProtClustDB:CLSK757244
            BioCyc:CPSY167879:GI48-623-MONOMER Uniprot:Q489H8
        Length = 917

 Score = 120 (47.3 bits), Expect = 0.00067, P = 0.00067
 Identities = 61/248 (24%), Positives = 99/248 (39%)

Query:   163 NKELSEEEKNVLQTRLKKYEETLSISPKDSTALEG---------AAVTLAELGDYTRAVS 213
             N  L+ + K  ++ + K YE+  S +   S A +G         A ++  +LGD  +A  
Sbjct:   267 NSPLAHQYKAQVEYQKKNYEDARSYAI--SAAQQGNEFIISKLIAGMSSYQLGDIEQAYG 324

Query:   214 LLQDLAKEKPSDPDVFRLLGEVKYELK-DYEGSAAAYRVSTMVSKDINFEVLRGLTNALL 272
              L    K  PS   + R+L  +K +L    EG      +  + + D    + +  +  L+
Sbjct:   325 YLNQTEKYLPSSHPIKRILASIKIKLGYTTEGIVQLSALEGLTTSDAG--LFQSSSIELI 382

Query:   273 AAKKPDEAVQFL----LASRERLSTGKSDD---LSVKDGRSGDKKETEPQKVDPI--QVE 323
              A   + A++ L    + + E  S         LS  D ++G         +DP    VE
Sbjct:   383 KAGDFENAIKLLDKASIIAPENASVAAQKGMLKLSQND-KTGIASLEHALNLDPNLKDVE 441

Query:   324 LLLGKAYSDGGRVSDAVAVYDRLISSYPNDFRGYLAKGIILKENGKVGDAERMFIQARFF 383
               L   Y D G+     ++  + I+S  N   GYL  GII   N     AE  + +A   
Sbjct:   442 FSLAIQYLDNGQEKKVRSIAKKWIASQDNQASGYLLLGIIHSNNNLSSKAEENYQKALSI 501

Query:   384 APEKVKAL 391
              PE   AL
Sbjct:   502 EPENYTAL 509


>TIGR_CMR|CPS_0528 [details] [associations]
            symbol:CPS_0528 "TPR domain protein" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
            SMART:SM00028 EMBL:CP000083 GenomeReviews:CP000083_GR
            Gene3D:1.25.40.10 eggNOG:NOG82907 InterPro:IPR014266
            TIGRFAMs:TIGR02917 RefSeq:YP_267286.1 ProteinModelPortal:Q489H8
            STRING:Q489H8 GeneID:3518486 KEGG:cps:CPS_0528 PATRIC:21464401
            HOGENOM:HOG000133966 OMA:KIERTES ProtClustDB:CLSK757244
            BioCyc:CPSY167879:GI48-623-MONOMER Uniprot:Q489H8
        Length = 917

 Score = 120 (47.3 bits), Expect = 0.00067, P = 0.00067
 Identities = 61/248 (24%), Positives = 99/248 (39%)

Query:   163 NKELSEEEKNVLQTRLKKYEETLSISPKDSTALEG---------AAVTLAELGDYTRAVS 213
             N  L+ + K  ++ + K YE+  S +   S A +G         A ++  +LGD  +A  
Sbjct:   267 NSPLAHQYKAQVEYQKKNYEDARSYAI--SAAQQGNEFIISKLIAGMSSYQLGDIEQAYG 324

Query:   214 LLQDLAKEKPSDPDVFRLLGEVKYELK-DYEGSAAAYRVSTMVSKDINFEVLRGLTNALL 272
              L    K  PS   + R+L  +K +L    EG      +  + + D    + +  +  L+
Sbjct:   325 YLNQTEKYLPSSHPIKRILASIKIKLGYTTEGIVQLSALEGLTTSDAG--LFQSSSIELI 382

Query:   273 AAKKPDEAVQFL----LASRERLSTGKSDD---LSVKDGRSGDKKETEPQKVDPI--QVE 323
              A   + A++ L    + + E  S         LS  D ++G         +DP    VE
Sbjct:   383 KAGDFENAIKLLDKASIIAPENASVAAQKGMLKLSQND-KTGIASLEHALNLDPNLKDVE 441

Query:   324 LLLGKAYSDGGRVSDAVAVYDRLISSYPNDFRGYLAKGIILKENGKVGDAERMFIQARFF 383
               L   Y D G+     ++  + I+S  N   GYL  GII   N     AE  + +A   
Sbjct:   442 FSLAIQYLDNGQEKKVRSIAKKWIASQDNQASGYLLLGIIHSNNNLSSKAEENYQKALSI 501

Query:   384 APEKVKAL 391
              PE   AL
Sbjct:   502 EPENYTAL 509


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.132   0.355    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      398       371   0.00086  117 3  11 23  0.46    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  563 (60 KB)
  Total size of DFA:  175 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  35.85u 0.28s 36.13t   Elapsed:  00:00:05
  Total cpu time:  35.85u 0.28s 36.13t   Elapsed:  00:00:06
  Start:  Tue May 21 02:32:16 2013   End:  Tue May 21 02:32:22 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data