BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015907
(398 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC OS=Arabidopsis
thaliana GN=SEC PE=2 SV=1
Length = 977
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 30/199 (15%)
Query: 181 YEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKYELK 240
Y E + I P + A A E GD RA+ ++ K KP+ PD + LG V L
Sbjct: 212 YLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALG 271
Query: 241 DYEGSAAAYRVSTMVSKDINFEVLRGLTNALLAAKKPDEAVQFLLASRERLSTGKSDDLS 300
+ Y+ + + +P+ A+ F + G+ DL+
Sbjct: 272 RPTEAIMCYQHALQM--------------------RPNSAMAFGNIASIYYEQGQL-DLA 310
Query: 301 VKDGRSGDKKETEPQKVDPIQVELL--LGKAYSDGGRVSDAVAVYDRLISSYPNDFRGYL 358
++ + + DP +E LG A D GRV +AV Y++ ++ PN +
Sbjct: 311 IRHYKQALSR-------DPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQPNHPQAMA 363
Query: 359 AKGIILKENGKVGDAERMF 377
G I E +G A +F
Sbjct: 364 NLGNIYMEWNMMGPASSLF 382
>sp|Q86TV6|TTC7B_HUMAN Tetratricopeptide repeat protein 7B OS=Homo sapiens GN=TTC7B PE=1
SV=3
Length = 843
Score = 39.7 bits (91), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 179 KKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEV 235
+ YEE L+ISP +++ A+ L +LG Y+ A +L+D + + +V+ LGEV
Sbjct: 751 RWYEEALAISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEV 807
>sp|O23052|Y1515_ARATH Uncharacterized TPR repeat-containing protein At1g05150
OS=Arabidopsis thaliana GN=At1g05150 PE=1 SV=1
Length = 808
Score = 38.5 bits (88), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 319 PIQVELL--LGKAYSDGGRVSDAVAVYDRLISSYPNDFRGYLAKGIILKENGKVGDAERM 376
P V+ L LG Y D GR A +Y R+++ +PN +R L K + L G+ +A+R
Sbjct: 409 PGHVDALYNLGGLYMDLGRFQRASEMYTRVLTVWPNHWRAQLNKAVSLLGAGETEEAKRA 468
Query: 377 FIQA 380
+A
Sbjct: 469 LKEA 472
>sp|Q8S8L9|Y2245_ARATH Uncharacterized TPR repeat-containing protein At2g32450
OS=Arabidopsis thaliana GN=At2g32450 PE=1 SV=1
Length = 802
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 319 PIQVELL--LGKAYSDGGRVSDAVAVYDRLISSYPNDFRGYLAKGIILKENGKVGDAERM 376
P V+ L LG Y D GR A +Y R+++ +PN +R L K + L G+ +A+R
Sbjct: 404 PGHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQLNKAVSLLGAGETEEAKRA 463
Query: 377 FIQA 380
+A
Sbjct: 464 LKEA 467
>sp|A4IFF3|TTC9C_BOVIN Tetratricopeptide repeat protein 9C OS=Bos taurus GN=TTC9C PE=2
SV=1
Length = 171
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 23/113 (20%)
Query: 154 SPTEEAGVVNKELSEEEKNVLQT----------------------RLKKY-EETLSISPK 190
SP G L+ E++N+L T R+K+Y ++ L P
Sbjct: 47 SPIPNLGPQGPALTPEQENLLHTTQTDCYNNLAACLLQMEPVNYERVKEYSQKVLERQPD 106
Query: 191 DSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKYELKDYE 243
++ AL A V L DY +A L KP D +V R L + EL Y
Sbjct: 107 NAKALYRAGVAFFHLQDYDQARHYLMAAVNRKPKDANVRRYLQRTQLELSSYH 159
>sp|Q6DCD5|TMTC2_XENLA Transmembrane and TPR repeat-containing protein 2 OS=Xenopus laevis
GN=tmtc2 PE=2 SV=1
Length = 836
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 314 PQKVDPIQVELLLGKAYSDGGRVSDAVAVYDRLISSYPNDFRGYLAKGIILKENGKVGDA 373
P++ P + ++G+AY VS+A Y + S P+ +L G +L G+ +A
Sbjct: 637 PRQFSPQSLYNMMGEAYMRLNVVSEAEHWYTESLKSKPDHIPAHLTYGKLLTLTGRKNEA 696
Query: 374 ERMFIQARFFAPEK 387
ER F++A P K
Sbjct: 697 ERYFLKAIQLDPNK 710
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 326 LGKAYSDGGRVSDAVAVYDRLISSYPNDFRGYLAKGIILKENGKVGDAERMFIQARFFAP 385
LG + + S+A+ Y I S P GYL GIIL G+ +A R F++
Sbjct: 533 LGLLLQENSKFSEALHYYKLAIGSRPTLASGYLNTGIILMNQGRTEEARRTFLKCSEIPD 592
Query: 386 EKVK 389
E +K
Sbjct: 593 ENLK 596
>sp|Q96301|SPY_ARATH Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Arabidopsis
thaliana GN=SPY PE=1 SV=1
Length = 914
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 175 QTRLKKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGE 234
Q ++KY E L I P + A V +E+ Y A+S + A E+P + + +G
Sbjct: 169 QEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDNALSCYEKAALERPMYAEAYCNMGV 228
Query: 235 VKYELKDYEGSAAAYRVSTMVSKDINFEV 263
+ D E + Y VS NFE+
Sbjct: 229 IYKNRGDLEMAITCYERCLAVSP--NFEI 255
>sp|Q73JJ8|RPOC_TREDE DNA-directed RNA polymerase subunit beta' OS=Treponema denticola
(strain ATCC 35405 / CIP 103919 / DSM 14222) GN=rpoC PE=3
SV=1
Length = 1424
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 146 DFLPSGSV--SPTEEAGVVNKELSEEEKNVLQTRLKKYEETLSISPKDSTALEGAAVTLA 203
D LP ++ EE GVV K +S+ + +Q R+ +E+ + +DS L G A L
Sbjct: 1059 DILPGTTLKEEADEETGVVEKRISDAHFDKMQPRIFISDESGNTVGEDSYFLPGGAQLLV 1118
Query: 204 ELGDYTRAVSLLQDLAKEKPSDPDV 228
E G +A ++L +AKE D+
Sbjct: 1119 EEGQEIKAGAILAKIAKESVKTKDI 1143
>sp|P31600|NFRA_ECOLI Bacteriophage N4 adsorption protein A OS=Escherichia coli (strain
K12) GN=nfrA PE=4 SV=1
Length = 990
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 4/123 (3%)
Query: 142 FALGDFLPSGSVSPTEEAGVVNKELSEEEKNVLQTRLKKYEETLSISPKDSTALEGAAVT 201
AL D S +++P+ A V + + NV + L + P +S
Sbjct: 597 LALNDLTRSINIAPSANAYVARATIYRQRHNV-PAAVSDLRAALELEPNNSNTQAALGYA 655
Query: 202 LAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKYELKDYEGSAAAYRVSTMVSKDINF 261
L + GD ++ +L+ K P DP + R L V L D A + +V DI+
Sbjct: 656 LWDSGDIAQSREMLEPAHKGLPDDPALIRQLAYVNQRLDD---MPATQHYARLVIDDIDN 712
Query: 262 EVL 264
+ L
Sbjct: 713 QAL 715
>sp|Q9V3X5|TMTC2_DROME Transmembrane and TPR repeat-containing protein CG4341
OS=Drosophila melanogaster GN=CG4341 PE=2 SV=1
Length = 938
Score = 36.2 bits (82), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 17/171 (9%)
Query: 181 YEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKYELK 240
Y ++I+P AL L+ G Y A +LQ+ + +P+ DV LG + +
Sbjct: 593 YRSAIAINPPK--ALGNLGSVLSSQGRYEEAKQVLQEAIRFRPNMADVHFNLGILHQNQQ 650
Query: 241 DYEGSAAAYRVSTMVSKDINFEVLRGLTNALLAAKKPDEAVQFLLASRERLSTGKSDDLS 300
Y + ++ + ++ L L + +A K +A++ L A D +
Sbjct: 651 VYPAAVECFQRAIKFRPNLAVAYL-NLGISFIALGKRQQAIEILQAG------SNLDGAA 703
Query: 301 VKDGRSGDKKETEPQKVDPIQVELLLGKAYSDGGRVSDAVAVYDRLISSYP 351
V+D + D+ + L LG Y + G++ A+A+Y +SS P
Sbjct: 704 VRDRTAHDQARSS--------AYLQLGALYVEQGKLQRALAIYREALSSLP 746
>sp|Q9D6E4|TTC9B_MOUSE Tetratricopeptide repeat protein 9B OS=Mus musculus GN=Ttc9b PE=2
SV=1
Length = 239
Score = 36.2 bits (82), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 25/108 (23%)
Query: 148 LPSGSVSPTEEAGVVNKELSEEEKNV----------------LQTRLKKYEETLSISPKD 191
LP+ S PT G LSEE++ + LQ+ L YE K
Sbjct: 104 LPTPSPGPTTSPGPAR--LSEEQRRLVENTEVECYDSLTACLLQSELVNYERVREYCLKV 161
Query: 192 STALEG-------AAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLL 232
+G A + LGDY RA+ LQ+ +P+D +V R +
Sbjct: 162 LEKQQGNFKATYRAGIAFYHLGDYARALRYLQEARSREPTDTNVLRYI 209
>sp|Q56A06|TMTC2_MOUSE Transmembrane and TPR repeat-containing protein 2 OS=Mus musculus
GN=Tmtc2 PE=2 SV=1
Length = 836
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 326 LGKAYSDGGRVSDAVAVYDRLISSYPNDFRGYLAKGIILKENGKVGDAERMFIQARFFAP 385
LG + R ++A+ Y I S P YL GIIL GK +A R F++
Sbjct: 533 LGLLLQENSRFAEALHYYKLAIGSRPTLASAYLNTGIILMNQGKTEEARRTFLKCSEIPD 592
Query: 386 EKVK 389
E +K
Sbjct: 593 ENLK 596
>sp|Q8N394|TMTC2_HUMAN Transmembrane and TPR repeat-containing protein 2 OS=Homo sapiens
GN=TMTC2 PE=2 SV=1
Length = 836
Score = 35.0 bits (79), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 326 LGKAYSDGGRVSDAVAVYDRLISSYPNDFRGYLAKGIILKENGKVGDAERMFIQARFFAP 385
LG + R ++A+ Y I S P YL GIIL G+ +A R F++
Sbjct: 533 LGLLLQENSRFAEALHYYKLAIGSRPTLASAYLNTGIILMNQGRTEEARRTFLKCSEIPD 592
Query: 386 EKVK 389
E +K
Sbjct: 593 ENLK 596
>sp|P55727|Y4YS_RHISN Uncharacterized protein y4yS OS=Rhizobium sp. (strain NGR234)
GN=NGR_a00520 PE=4 SV=1
Length = 182
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 286 ASRERLSTGKSDDLSVKDGRSGDKKETEPQKVDPIQVELLLGKAYSDGGRVSDAVAVYDR 345
A+R+R+ +D + R D + P VD + L KA R +A+ V D
Sbjct: 60 ATRQRILRAVGEDAQERALR--DDLKQHPGNVD---AAIRLTKALVAQKRPHEALQVLDN 114
Query: 346 LISSYPNDFRGYLAKGIILKENGKVGDAERMFIQARFFAPEK 387
++ P++ R AK +IL G+ A+ ++ QA PE
Sbjct: 115 VLVVTPDNLRALNAKAVILDIEGRHDAAQELYRQALETNPEN 156
>sp|Q8N6N2|TTC9B_HUMAN Tetratricopeptide repeat protein 9B OS=Homo sapiens GN=TTC9B PE=2
SV=1
Length = 239
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 25/108 (23%)
Query: 148 LPSGSVSPTEEAGVVNKELSEEEKNV----------------LQTRLKKYEETLSISPKD 191
LP+ + PT G LSEE++ + LQ+ L YE K
Sbjct: 106 LPAPAPGPTSSPGPAR--LSEEQRRLVESTEVECYDSLTACLLQSELVNYERVREYCLKV 163
Query: 192 STALEG-------AAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLL 232
+G A + LGDY RA+ LQ+ +P+D +V R +
Sbjct: 164 LEKQQGNFKATYRAGIAFYHLGDYARALRYLQEARSREPTDTNVLRYI 211
>sp|Q6DEU9|CTR9_XENTR RNA polymerase-associated protein CTR9 homolog OS=Xenopus
tropicalis GN=ctr9 PE=2 SV=1
Length = 1172
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 56/151 (37%), Gaps = 11/151 (7%)
Query: 141 VFALGDFLPSGSVSPTEEAGVVNKELSEEEKNVLQTRLKKYEETLSISPKDSTALEGAAV 200
+ ALG+ PT + E+EK L Y++ L K+ A G
Sbjct: 604 MLALGNVWLQTLHQPTRD--------REKEKRHQDRALAIYKQVLRNDSKNLYAANGIGA 655
Query: 201 TLAELGDYTRAVSLLQDLAKEKPSD-PDVFRLLGEVKYELKDYEGSAAAY-RVSTMVSKD 258
LA G Y R + +E +D DV+ L + E K Y + Y K
Sbjct: 656 VLAHKG-YVREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKH 714
Query: 259 INFEVLRGLTNALLAAKKPDEAVQFLLASRE 289
N EVL L AL K E Q LL +R
Sbjct: 715 QNTEVLLYLARALFKCGKLQECKQILLKARH 745
>sp|Q8VY89|APC7_ARATH Anaphase-promoting complex subunit 7 OS=Arabidopsis thaliana
GN=APC7 PE=2 SV=1
Length = 558
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 178 LKKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKY 237
+ ++E+ SI P T+++ A+ L DY+R L+ DL + +VF L V +
Sbjct: 266 IMRFEKVRSIDPYTLTSMDEYAMLLQIKCDYSRLNKLVHDLLSVDHTRAEVFVALS-VLW 324
Query: 238 ELKDYEGSAAAYRVSTMV-SKDINFEVLRGLTNALLAAKKPD 278
E KD + + S V + I +++G N LL AK+P+
Sbjct: 325 ERKDARTALSYAEKSIRVDERHIPGYIMKG--NLLLQAKRPE 364
>sp|Q4QR29|CTR9_XENLA RNA polymerase-associated protein CTR9 homolog OS=Xenopus laevis
GN=ctr9 PE=2 SV=1
Length = 1157
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 56/151 (37%), Gaps = 11/151 (7%)
Query: 141 VFALGDFLPSGSVSPTEEAGVVNKELSEEEKNVLQTRLKKYEETLSISPKDSTALEGAAV 200
+ ALG+ PT + E+EK L Y++ L K+ A G
Sbjct: 604 MLALGNVWLQTLHQPTRD--------REKEKRHQDRALAIYKQVLRNDSKNLFAANGIGA 655
Query: 201 TLAELGDYTRAVSLLQDLAKEKPSD-PDVFRLLGEVKYELKDYEGSAAAY-RVSTMVSKD 258
LA G Y R + +E +D DV+ L + E K Y + Y K
Sbjct: 656 VLAHKG-YVREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKH 714
Query: 259 INFEVLRGLTNALLAAKKPDEAVQFLLASRE 289
N EVL L AL K E Q LL +R
Sbjct: 715 QNTEVLLYLARALFKCGKLQECKQILLKARH 745
>sp|Q810A3|TTC9C_MOUSE Tetratricopeptide repeat protein 9C OS=Mus musculus GN=Ttc9c PE=2
SV=1
Length = 171
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 177 RLKKY-EETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEV 235
R+++Y ++ L P ++ AL A V L DY RA L +P D +V R L
Sbjct: 92 RVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDRARHHLLAAVNRQPKDANVRRYLQLT 151
Query: 236 KYELKDYE 243
+ EL Y
Sbjct: 152 QSELSSYH 159
>sp|P17885|BIMA_EMENI Protein bimA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=bimA PE=2 SV=1
Length = 806
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 111 DYDAPIETEKKTIGLGTK-----IGVGVAVVIFG-LVFALGDFLPSGSVSPTEEAGVVNK 164
+YD ++ + I ++ G+G G L FA F + ++P+ +
Sbjct: 630 EYDKALDAYRSGINADSRHYNAWYGLGTVYDKMGKLDFAEQHFRNAAKINPSNAVLICCI 689
Query: 165 ELSEEEKNVLQTRLKKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPS 224
L E+ N ++ L +Y +++P A A L +L D A++ L+ L P
Sbjct: 690 GLVLEKMNNPKSALIQYNRACTLAPHSVLARFRKARALMKLQDLKSALTELKVLKDMAPD 749
Query: 225 DPDVFRLLGEVKYELKD 241
+ +V LLG++ L+D
Sbjct: 750 EANVHYLLGKLYKMLRD 766
>sp|O82039|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Petunia
hybrida GN=SPY PE=2 SV=1
Length = 932
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 175 QTRLKKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGE 234
Q ++KY E + I + A V +E+ Y A++ + A E+P + + +G
Sbjct: 174 QEGIQKYYEAIKIDSHYAPAYYNLGVVYSEMMQYDMALNCYEKAAIERPMYAEAYCNMGV 233
Query: 235 VKYELKDYEGSAAAYRVSTMVSKDINFEV 263
+ D E + A Y VS NFE+
Sbjct: 234 IYKNRGDLESAIACYERCLAVSP--NFEI 260
>sp|Q6P5P3|TTC9C_RAT Tetratricopeptide repeat protein 9C OS=Rattus norvegicus GN=Ttc9c
PE=2 SV=1
Length = 171
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 23/113 (20%)
Query: 154 SPTEEAGVVNKELSEEEKNVLQT----------------------RLKKY-EETLSISPK 190
SP G L+ E++N+L T R+++Y ++ L P+
Sbjct: 47 SPIPNLGPQGPALTPEQENILHTIQTDCYNNLAACLLQMEPVKYERVREYSQKVLERQPE 106
Query: 191 DSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKYELKDYE 243
++ AL A V L DY +A L +P D +V R L + EL Y
Sbjct: 107 NAKALYRAGVAFFHLQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYH 159
>sp|P42460|Y270_SYNE7 TPR repeat-containing protein Synpcc7942_0270 OS=Synechococcus
elongatus (strain PCC 7942) GN=Synpcc7942_0270 PE=4 SV=1
Length = 403
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 205 LGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKYELKDYEGSAAAYR 250
+G+Y A++ Q + P+DP +++ LG V +++ E S AA+R
Sbjct: 330 IGNYPEAIAAYQQALQLDPNDPSLYQNLGAVLFQVGQLEASYAAFR 375
>sp|Q1AWA6|SYA_RUBXD Alanine--tRNA ligase OS=Rubrobacter xylanophilus (strain DSM 9941 /
NBRC 16129) GN=alaS PE=3 SV=1
Length = 882
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 105 KEFGPIDYDAPIETEKKTIGLGTKIGVGVAVVIFGLVFALGDFLPSGSVSPTEEAGVVNK 164
+EFGP D P+E + G G + G + ++ LVF + L GS+ P E+ G+
Sbjct: 184 EEFGPGD---PLEDAR--YGPGGEEGDARFLEVWNLVFNQYEQLRDGSLRPLEQTGIDTG 238
Query: 165 ELSEEEKNVLQTRLKKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAK 220
E V+Q YE L +P A E V L + + RA+ +L D A+
Sbjct: 239 MGLERIAAVMQGARSVYETDL-YAPVIERAREYTGVALGDGEETDRALRILADHAR 293
>sp|Q6DI40|TTC33_DANRE Tetratricopeptide repeat protein 33 OS=Danio rerio GN=ttc33 PE=2
SV=1
Length = 268
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 166 LSEEEKNVLQTRLKKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSD 225
L+E+++N LKK++E + ++P+D+ E + L LG+ AV + + +P
Sbjct: 70 LAEQDRN--WEALKKWDEAVQLTPEDAVLYEMKSQVLITLGEVFLAVQSAEMATRLRPIW 127
Query: 226 PDVFRLLGEVKYELKDYEGSAAAYRVST--------MVSKDINFEV-LRGLTNALLA-AK 275
+ ++ LG + L + E + +++V+ + +D+N+ + LR +L A
Sbjct: 128 WEAWQTLGRAQLSLGEVELAVRSFQVALHLHPSERPLWEEDLNWALKLRENQQSLREKAS 187
Query: 276 KPDEAVQFLLASRE 289
+ DEA + L+ + E
Sbjct: 188 QVDEARRLLVEAPE 201
>sp|Q8RVB2|SPY_SOLLC Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Solanum
lycopersicum GN=SPY PE=2 SV=1
Length = 931
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 175 QTRLKKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGE 234
Q ++KY E + I + A V +E+ Y A++ + A E+P + + +G
Sbjct: 174 QEGIQKYYEAIKIDSHYAPAYYNLGVVYSEMMQYDMALNCYEKAALERPMYAEAYCNMGV 233
Query: 235 VKYELKDYEGSAAAYRVSTMVSKDINFEV 263
+ D E + A Y VS NFE+
Sbjct: 234 IFKNRGDLESAIACYERCLAVSP--NFEI 260
>sp|Q9BGT1|TTC9C_MACFA Tetratricopeptide repeat protein 9C OS=Macaca fascicularis GN=TTC9C
PE=2 SV=1
Length = 171
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 23/113 (20%)
Query: 154 SPTEEAGVVNKELSEEEKNVLQT----------------------RLKKY-EETLSISPK 190
SP G L+ E++N+L T R+++Y ++ L P
Sbjct: 47 SPLPNLGPQGPALTPEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPD 106
Query: 191 DSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKYELKDYE 243
++ AL A V L DY +A L +P D +V R L + EL Y
Sbjct: 107 NAKALYRAGVAFFHLQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYH 159
>sp|Q8N5M4|TTC9C_HUMAN Tetratricopeptide repeat protein 9C OS=Homo sapiens GN=TTC9C PE=1
SV=1
Length = 171
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 23/113 (20%)
Query: 154 SPTEEAGVVNKELSEEEKNVLQT----------------------RLKKY-EETLSISPK 190
SP G L+ E++N+L T R+++Y ++ L P
Sbjct: 47 SPLPNLGPQGPALTPEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPD 106
Query: 191 DSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKYELKDYE 243
++ AL A V L DY +A L +P D +V R L + EL Y
Sbjct: 107 NAKALYRAGVAFFHLQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYH 159
>sp|P17883|SKI3_YEAST Superkiller protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=SKI3 PE=1 SV=2
Length = 1432
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 21/161 (13%)
Query: 59 SLPTQAPFLSSGYNSKSNNSSSDINFEERLAAVRRSALEQKKAEEIKEF----GPIDYDA 114
S+ + L+S Y S SD F + VR S E+ F P DA
Sbjct: 917 SIACKFLILASKY------SVSDQKFTDIAGTVRASYWYNIGISELTAFITLKEPQYRDA 970
Query: 115 PIETEKKTIGLG-----TKIGVGVAVVIFGLVFALGDFLPSGSVSPTEEAGVVNKE---L 166
I KK+I L T IG+G+A + + F+ + ++ P N L
Sbjct: 971 AIFAFKKSIQLQSNTSETWIGLGIATMDINFRVSQHCFIKATALEPKATNTWFNLAMLGL 1030
Query: 167 SEEEKNVLQTRLKKYEETLSISPKDSTALEGAAVTLAELGD 207
+++ Q L K + S++P+DS+ G A+ L E GD
Sbjct: 1031 KKKDTEFAQQVLNKLQ---SLAPQDSSPWLGMALILEEQGD 1068
>sp|Q57711|Y941_METJA TPR repeat-containing protein MJ0941 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0941 PE=4 SV=3
Length = 338
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 25/193 (12%)
Query: 178 LKKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKY 237
LK Y E L+ +P A L +LG Y A+ L + KP D + L G +
Sbjct: 151 LKCYNEVLTYTPNFVPMWVKKAEILRKLGRYEDALLCLNRALELKPHDKNALYLKGVLLK 210
Query: 238 ELKDYEGSAAAYRVSTMVSKDINFEVLRGLTNALLAAKKPDEAVQFLLASRERLSTGKSD 297
+ + + ++ + ++N + + + + AV +LA D
Sbjct: 211 RMGKFREALECFK---KLIDELNVKWIDAIRH----------AVSLMLA---------LD 248
Query: 298 DLSVKDGRSGDKKETEPQKVDPIQVELLLGKAYSDGGRVSDAVAVYDRLISSYPNDFRGY 357
DL KD E +K D + + G+ Y G++ +A+ Y+++I P+ +
Sbjct: 249 DL--KDAERYINIGLEIRK-DDVALWYFKGELYERLGKLDEALKCYEKVIELQPHYIKAL 305
Query: 358 LAKGIILKENGKV 370
L+K I + G +
Sbjct: 306 LSKARIYERQGNI 318
>sp|P54493|GLUP_BACSU Rhomboid protease GluP OS=Bacillus subtilis (strain 168) GN=gluP
PE=1 SV=2
Length = 507
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 134 AVVIFGLVFALGDFLPSGSVSPTEEAGVVNKELSEEEKNVLQTRLKKYEETLSI-----S 188
AV++ L A+G FL G SP+ + + ++ SE + KYEE + +
Sbjct: 368 AVLLIAL--AVG-FLYYGLHSPSHQESALIQQASELYQE------GKYEEVTELLNGEAA 418
Query: 189 PKDSTA--LEGAAVTLAELGDYTRAVSLLQDLAKEKPSD 225
KD++A L+ AV+ ++G+Y +AVSLL+ K++P D
Sbjct: 419 QKDASADLLKILAVSDIQIGEYDQAVSLLERAVKKEPKD 457
>sp|Q62018|CTR9_MOUSE RNA polymerase-associated protein CTR9 homolog OS=Mus musculus
GN=Ctr9 PE=1 SV=2
Length = 1173
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 54/150 (36%), Gaps = 9/150 (6%)
Query: 141 VFALGDFLPSGSVSPTEEAGVVNKELSEEEKNVLQTRLKKYEETLSISPKDSTALEGAAV 200
+ ALG+ PT + E+EK L Y++ L K+ A G
Sbjct: 604 MLALGNVWLQTLHQPTRD--------REKEKRHQDRALAIYKQVLRNDAKNLYAANGIGA 655
Query: 201 TLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKYELKDYEGSAAAY-RVSTMVSKDI 259
LA G + A + + + DV+ L + E K Y + Y K
Sbjct: 656 VLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQ 715
Query: 260 NFEVLRGLTNALLAAKKPDEAVQFLLASRE 289
N EV+ L AL K E Q LL +R
Sbjct: 716 NTEVVLYLARALFKCGKLQECKQTLLKARH 745
>sp|Q6PD62|CTR9_HUMAN RNA polymerase-associated protein CTR9 homolog OS=Homo sapiens
GN=CTR9 PE=1 SV=1
Length = 1173
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 54/150 (36%), Gaps = 9/150 (6%)
Query: 141 VFALGDFLPSGSVSPTEEAGVVNKELSEEEKNVLQTRLKKYEETLSISPKDSTALEGAAV 200
+ ALG+ PT + E+EK L Y++ L K+ A G
Sbjct: 604 MLALGNVWLQTLHQPTRD--------REKEKRHQDRALAIYKQVLRNDAKNLYAANGIGA 655
Query: 201 TLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKYELKDYEGSAAAY-RVSTMVSKDI 259
LA G + A + + + DV+ L + E K Y + Y K
Sbjct: 656 VLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQ 715
Query: 260 NFEVLRGLTNALLAAKKPDEAVQFLLASRE 289
N EV+ L AL K E Q LL +R
Sbjct: 716 NTEVVLYLARALFKCGKLQECKQTLLKARH 745
>sp|Q7Z4N2|TRPM1_HUMAN Transient receptor potential cation channel subfamily M member 1
OS=Homo sapiens GN=TRPM1 PE=1 SV=2
Length = 1603
Score = 33.1 bits (74), Expect = 4.1, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 33 TDKTNKEEKKGVMSQPKRKSLSKQSGSLPTQA----PFLSSGYNSKS 75
T N+EE K V +QP++ S++K + S PT + F GY++K+
Sbjct: 24 TPSKNEEESKQVETQPEKWSVAKHTQSYPTDSYGVLEFQGGGYSNKA 70
>sp|P41842|YO91_CAEEL TPR repeat-containing protein T20B12.1 OS=Caenorhabditis elegans
GN=T20B12.1 PE=4 SV=2
Length = 771
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 36/164 (21%)
Query: 196 EGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKYELKDYEGSAAAYRVSTMV 255
+G +LG +A +L++ L ++KP+D + LG++ L+ + + +
Sbjct: 393 DGVIDCYKQLGQMDKAETLIRRLIEQKPNDSMLHVYLGDITRNLEYFTKAIE-------L 445
Query: 256 SKDINFEVLRGLTNALLAAKKPDEAVQFLLASRERLSTGKSDDLSVKDGRSGDKKETEPQ 315
S D N R L + LL KK +EA + L S E
Sbjct: 446 SDDRNARAHRSLGHLLLMDKKFEEAYKHLRRSLE-------------------------- 479
Query: 316 KVDPIQVELLLGKAYSDGG--RVSDAVAVYDRLISSYPNDFRGY 357
+ PIQ+ Y ++ Y R +S P+ F +
Sbjct: 480 -LQPIQLGTWFNAGYCAWKLENFKESTQCYHRCVSLQPDHFEAW 522
>sp|Q58350|Y940_METJA TPR repeat-containing protein MJ0940 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0940 PE=4 SV=1
Length = 318
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 83/206 (40%), Gaps = 28/206 (13%)
Query: 172 NVLQTRLKKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRL 231
N+L++ L ++ L ++P A A++LA LGD +++ L+D+ +DP + L
Sbjct: 32 NLLES-LYYLDKALELNPDFKFAKFLKAISLAILGDINKSIECLEDIT-SNSNDPVAYAL 89
Query: 232 LGEVKYELKDYEGSAAAYRVSTMVSKDINFEVLRGLTNALLAAKKPDEAVQFLLASRERL 291
LG++ L +++ + Y S + + A F L
Sbjct: 90 LGQLYELLGNFDNALECYEKSLGIEEKF--------------------ATAFFLKVLCLG 129
Query: 292 STGKSDDLSVKDGRSGDKKETEPQKVDPIQVELLLGKAYSDGGRVSDAVAVYDRLISSYP 351
+GK D+L + D+ + P + + GR +A+A ++++
Sbjct: 130 LSGKYDELL----KCCDRLISFAPNFIPAYI--IKANMLRKLGRYEEALACVNKVLELKE 183
Query: 352 NDFRGYLAKGIILKENGKVGDAERMF 377
ND K +IL G +A + +
Sbjct: 184 NDTNAIYLKALILNRIGNCDEALKYY 209
>sp|Q06AN9|CD27A_ARATH Cell division cycle protein 27 homolog A OS=Arabidopsis thaliana
GN=CDC27A PE=1 SV=2
Length = 717
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 199 AVTLAELGDYTRAVSLLQDLAKEKPSDPDVFRLLGEVKYELKDYEGSAAAYRVSTMVS 256
A L LGDY +A +L++L + P + V LG++ +LK Y+ + + ++ +S
Sbjct: 632 AHILTSLGDYHKAQKVLEELKECAPQESSVHASLGKIYNQLKQYDKAVLHFGIALDLS 689
>sp|Q46HK1|RSMH_PROMT Ribosomal RNA small subunit methyltransferase H OS=Prochlorococcus
marinus (strain NATL2A) GN=rsmH PE=3 SV=1
Length = 304
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 190 KDSTALEGAAVTLAELGDYTRAVSLLQDLAK-----EKPSDPDVFRLLGEVKYELKDYEG 244
K T +E + A+ + +A+ +L DL ++PS FRL G + + EG
Sbjct: 81 KFGTRIEIISTNFADFSHHEQAICVLADLGVSSHQLDEPSRGFSFRLNGPIDMRMNPKEG 140
Query: 245 SAAAYRVSTMVSKDI 259
S+AA + T+ +++
Sbjct: 141 SSAAELIETLSEQNL 155
>sp|P16602|ATI_COWPX A-type inclusion protein A25 homolog OS=Cowpox virus GN=ATI PE=3
SV=1
Length = 1284
Score = 32.7 bits (73), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 167 SEEEKNVLQTRLKKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQD-LAKEKPSD 225
S EE N L+TR++ E +L I KD + L A +ELG +S LQ+ L +E+ SD
Sbjct: 781 SSEEVNRLKTRIRDLERSLEICSKDESELYSAYK--SELGRAREQISNLQESLRRERESD 838
>sp|P06200|PHLC_PSEAE Hemolytic phospholipase C OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=plcH PE=3
SV=2
Length = 730
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 114 APIETEKKTIGLGTKIGVGVAVVIFGLVFALGDFLPSGSVSPTEEAGVVNKELSEEEK-- 171
AP+ K +GL T G V GL LG +P ++SP + G V+ E+ +
Sbjct: 368 APVPPWKDGVGLSTVSTAGEIEVSSGLPIGLGHRVPLIAISPWSKGGKVSAEVFDHTSVL 427
Query: 172 NVLQTRLKKYEETLS 186
L+ R EE +S
Sbjct: 428 RFLERRFGVVEENIS 442
>sp|P53043|PPT1_YEAST Serine/threonine-protein phosphatase T OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PPT1 PE=1 SV=1
Length = 513
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 156 TEEAGVVNKELSEEEKNVLQTRLKKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLL 215
T+ N+ + + + Q+ L +E + + PK+ A A++ L ++ +A L
Sbjct: 44 TQSIYFSNRAFAHFKVDNFQSALNDCDEAIKLDPKNIKAYHRRALSCMALLEFKKARKDL 103
Query: 216 QDLAKEKPSDP 226
L K KP+DP
Sbjct: 104 NVLLKAKPNDP 114
>sp|O06917|Y263_METJA TPR repeat-containing protein MJ0263 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0263 PE=4 SV=1
Length = 320
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 82/197 (41%), Gaps = 32/197 (16%)
Query: 153 VSPTEEAGVVNKELSEEEKNVLQTRLKKYEETLSISPKDSTALEGAAVTLAELGDYTRAV 212
+SP +A ++ E E EK L+ +E L I P ++ L A L LG A+
Sbjct: 115 LSPFHKA-LIYIEFGEFEK-----ALEALDEFLKIYPNLTSILRQKASILEILGKLDEAL 168
Query: 213 SLLQDLAKEKPSDPDVFRLLGEVKYELKDYEGSAAAYRVSTMVSKDINFEVLRGLTNALL 272
+ + K D + L G + +L + + + A +++ +++++ V + + L
Sbjct: 169 DCVNKILSIKKDDAHAWYLKGRILKKLGNIKEALDALKMAINLNENL-VHVYKDIAYLEL 227
Query: 273 AAKKPDEAVQFLLASRERLSTGKSDDLSVKDGRSGDKKETEPQKVDPIQVELLLGKAYSD 332
A +EA+ ++ E+ + ++ + L Y +
Sbjct: 228 ANNNYEEALNYITKYLEKFP-------------------------NDVEAKFYLALIYEN 262
Query: 333 GGRVSDAVAVYDRLISS 349
+V DA+ +YD++IS+
Sbjct: 263 LNKVDDALKIYDKIISN 279
>sp|A4IHU6|TTC9C_XENTR Tetratricopeptide repeat protein 9C OS=Xenopus tropicalis GN=ttc9c
PE=2 SV=1
Length = 178
Score = 32.3 bits (72), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 21/103 (20%)
Query: 147 FLPSGSVSPTEEAGVVNKELSEEEKNV------------LQTRLKKYE-------ETLSI 187
+ P V PT A +N + +EE K + LQ++ +Y+ + LS+
Sbjct: 53 YSPLPGVGPT--AVKLNSQQAEELKTLQADCYNNLAACLLQSQPPRYQRVYECSLQVLSL 110
Query: 188 SPKDSTALEGAAVTLAELGDYTRAVSLLQDLAKEKPSDPDVFR 230
P++ AL A V+ L DYT A L A P D ++ R
Sbjct: 111 QPENVKALYRAGVSSYHLKDYTNAHHYLSQAASRAPKDGNIKR 153
>sp|Q8LP10|SPY_EUSER Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Eustoma
exaltatum subsp. russellianum GN=SPY PE=2 SV=1
Length = 918
Score = 32.0 bits (71), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 152 SVSPTEEA-GVVNKELSEEEKNVLQTRLKKYEETLSISPKDSTALEGAAVTLAELGDYTR 210
S P E V +L K Q ++KY E + I P + A V +E+ Y
Sbjct: 131 SYKPAAECLATVLNDLGTSLKGNTQEGIQKYYEAVKIDPHYAPACYNLGVVYSEMMQYDV 190
Query: 211 AVSLLQDLAKEKPSDPDVF 229
A+S + A E P+ D +
Sbjct: 191 ALSCYERAATESPTYADAY 209
>sp|Q80HU9|ATI4_VACCW 27 kDa A-type inclusion protein OS=Vaccinia virus (strain Western
Reserve) GN=VACWR147 PE=4 SV=1
Length = 227
Score = 32.0 bits (71), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 167 SEEEKNVLQTRLKKYEETLSISPKDSTALEGAAVTLAELGDYTRAVSLLQD-LAKEKPSD 225
S EE N L+TR++ + +L I KD + L A T +LG +S LQ+ L +E+ SD
Sbjct: 66 SSEEVNRLKTRIRNLKRSLEICSKDESELYSAYKT--KLGRAREQISNLQESLRRERESD 123
Query: 226 P 226
Sbjct: 124 K 124
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.130 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,347,855
Number of Sequences: 539616
Number of extensions: 6165407
Number of successful extensions: 18437
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 18196
Number of HSP's gapped (non-prelim): 314
length of query: 398
length of database: 191,569,459
effective HSP length: 120
effective length of query: 278
effective length of database: 126,815,539
effective search space: 35254719842
effective search space used: 35254719842
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)