Query 015908
Match_columns 398
No_of_seqs 412 out of 2589
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 04:37:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015908.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015908hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lhh_A CBS domain protein; str 100.0 1.5E-28 5.3E-33 219.5 12.2 140 80-225 5-145 (172)
2 3oi8_A Uncharacterized protein 99.9 8.7E-27 3E-31 204.7 14.0 139 81-225 2-141 (156)
3 3ocm_A Putative membrane prote 99.9 1.6E-26 5.5E-31 207.9 12.3 154 98-340 13-167 (173)
4 3lv9_A Putative transporter; C 99.9 1.6E-25 5.6E-30 193.8 12.2 124 100-225 2-126 (148)
5 3oco_A Hemolysin-like protein 99.9 2.6E-25 9E-30 194.1 7.1 120 104-225 3-124 (153)
6 3kxr_A Magnesium transporter, 99.9 4.1E-22 1.4E-26 184.2 17.7 128 82-225 25-155 (205)
7 3lfr_A Putative metal ION tran 99.9 6.2E-23 2.1E-27 175.8 11.0 104 120-225 2-108 (136)
8 3jtf_A Magnesium and cobalt ef 99.9 2.4E-22 8.1E-27 170.4 13.6 106 118-225 2-107 (129)
9 3k6e_A CBS domain protein; str 99.9 9.3E-23 3.2E-27 180.3 9.3 111 111-225 4-123 (156)
10 3hf7_A Uncharacterized CBS-dom 99.9 2.8E-22 9.7E-27 170.6 10.6 104 120-225 1-108 (130)
11 3i8n_A Uncharacterized protein 99.9 2.2E-22 7.7E-27 170.6 9.7 107 117-225 2-110 (130)
12 3nqr_A Magnesium and cobalt ef 99.9 1.2E-21 4.1E-26 165.4 12.0 104 120-225 2-107 (127)
13 4esy_A CBS domain containing m 99.9 1.4E-21 4.6E-26 173.6 11.4 113 107-225 6-144 (170)
14 2yvy_A MGTE, Mg2+ transporter 99.8 3.8E-20 1.3E-24 177.8 12.6 118 102-225 116-238 (278)
15 2zy9_A Mg2+ transporter MGTE; 99.8 9.9E-20 3.4E-24 188.4 15.2 135 81-225 110-258 (473)
16 2oux_A Magnesium transporter; 99.8 3.9E-19 1.3E-23 172.0 15.6 118 102-225 118-240 (286)
17 4gqw_A CBS domain-containing p 99.8 5.9E-19 2E-23 151.3 11.9 105 119-225 3-124 (152)
18 3ctu_A CBS domain protein; str 99.8 1.7E-19 5.9E-24 156.9 8.6 109 113-225 7-123 (156)
19 3kpb_A Uncharacterized protein 99.8 5.1E-19 1.7E-23 147.0 9.9 101 121-225 1-101 (122)
20 2emq_A Hypothetical conserved 99.8 9.2E-19 3.1E-23 151.9 11.6 110 112-225 2-120 (157)
21 3sl7_A CBS domain-containing p 99.8 6.2E-19 2.1E-23 155.9 10.5 104 120-225 3-137 (180)
22 3lqn_A CBS domain protein; csg 99.8 5.4E-19 1.9E-23 152.5 9.3 105 117-225 11-124 (150)
23 3fhm_A Uncharacterized protein 99.8 5.5E-19 1.9E-23 155.7 9.1 110 114-225 17-132 (165)
24 2yzi_A Hypothetical protein PH 99.8 4.3E-18 1.5E-22 144.6 13.1 105 116-225 2-110 (138)
25 2ef7_A Hypothetical protein ST 99.8 2.8E-18 9.6E-23 144.8 11.8 103 118-225 1-106 (133)
26 3k2v_A Putative D-arabinose 5- 99.8 1.3E-18 4.4E-23 150.7 8.5 103 121-225 28-134 (149)
27 1yav_A Hypothetical protein BS 99.7 2.9E-18 9.9E-23 149.8 10.0 105 117-225 10-123 (159)
28 3gby_A Uncharacterized protein 99.7 3.8E-18 1.3E-22 143.8 10.3 102 119-225 3-107 (128)
29 4fry_A Putative signal-transdu 99.7 4.4E-18 1.5E-22 148.1 10.7 102 121-225 7-117 (157)
30 2rc3_A CBS domain; in SITU pro 99.7 3.8E-18 1.3E-22 144.6 10.0 101 122-225 7-113 (135)
31 2p9m_A Hypothetical protein MJ 99.7 8.1E-18 2.8E-22 142.7 11.8 104 118-225 5-117 (138)
32 2rih_A Conserved protein with 99.7 6.5E-18 2.2E-22 144.5 10.8 100 121-225 5-109 (141)
33 3fv6_A YQZB protein; CBS domai 99.7 1.7E-17 5.8E-22 145.3 12.0 103 118-225 14-122 (159)
34 1pbj_A Hypothetical protein; s 99.7 1.3E-17 4.3E-22 138.9 10.1 100 121-225 1-104 (125)
35 1pvm_A Conserved hypothetical 99.7 1.4E-17 4.7E-22 149.5 10.3 101 121-225 9-114 (184)
36 2qrd_G Protein C1556.08C; AMPK 99.7 1.6E-17 5.4E-22 161.4 11.5 122 103-225 3-148 (334)
37 1y5h_A Hypothetical protein RV 99.7 9.5E-18 3.2E-22 141.6 8.6 103 119-225 6-113 (133)
38 1o50_A CBS domain-containing p 99.7 2.3E-17 8E-22 143.9 11.2 103 117-225 12-134 (157)
39 2pfi_A Chloride channel protei 99.7 1.5E-17 5.3E-22 144.7 10.0 110 113-225 5-129 (164)
40 2nyc_A Nuclear protein SNF4; b 99.7 2.3E-17 8E-22 140.3 10.7 105 117-225 4-122 (144)
41 2j9l_A Chloride channel protei 99.7 1.7E-17 5.9E-22 147.4 10.0 106 118-225 8-147 (185)
42 2o16_A Acetoin utilization pro 99.7 2.3E-17 7.9E-22 144.8 10.2 103 119-225 3-117 (160)
43 2uv4_A 5'-AMP-activated protei 99.7 5.3E-17 1.8E-21 140.9 10.0 102 118-225 20-132 (152)
44 3t4n_C Nuclear protein SNF4; C 99.7 2.6E-17 9E-22 159.2 8.0 125 100-225 8-153 (323)
45 2v8q_E 5'-AMP-activated protei 99.7 2.1E-17 7.1E-22 160.6 7.0 124 99-225 15-157 (330)
46 1vr9_A CBS domain protein/ACT 99.7 7E-16 2.4E-20 142.4 14.1 101 119-225 11-111 (213)
47 3ddj_A CBS domain-containing p 99.7 3.2E-16 1.1E-20 149.6 12.2 130 81-225 64-195 (296)
48 3kh5_A Protein MJ1225; AMPK, A 99.6 1.9E-16 6.5E-21 148.9 8.9 134 81-225 51-187 (280)
49 3t4n_C Nuclear protein SNF4; C 99.6 6.2E-16 2.1E-20 149.5 12.2 105 117-225 183-301 (323)
50 3org_A CMCLC; transporter, tra 99.6 8.3E-17 2.8E-21 171.9 4.8 105 119-225 451-607 (632)
51 1zfj_A Inosine monophosphate d 99.6 1E-15 3.4E-20 158.4 12.7 131 81-225 54-192 (491)
52 3ddj_A CBS domain-containing p 99.6 9.1E-16 3.1E-20 146.5 10.2 104 118-225 153-266 (296)
53 3usb_A Inosine-5'-monophosphat 99.6 2E-15 6.7E-20 157.7 12.7 131 81-225 77-215 (511)
54 3kh5_A Protein MJ1225; AMPK, A 99.6 3.3E-15 1.1E-19 140.4 12.5 101 122-225 4-123 (280)
55 3l2b_A Probable manganase-depe 99.6 1E-15 3.5E-20 143.3 8.8 102 120-225 6-225 (245)
56 3pc3_A CG1753, isoform A; CBS, 99.6 1.6E-15 5.4E-20 158.6 9.7 103 118-225 381-488 (527)
57 2d4z_A Chloride channel protei 99.6 2.7E-15 9.1E-20 143.2 10.3 60 117-179 9-69 (250)
58 4fxs_A Inosine-5'-monophosphat 99.6 2.3E-16 7.8E-21 164.2 2.9 132 80-225 52-190 (496)
59 2yzq_A Putative uncharacterize 99.6 4.1E-15 1.4E-19 140.4 10.3 103 119-225 124-260 (282)
60 2yzq_A Putative uncharacterize 99.6 3.5E-15 1.2E-19 140.8 8.3 99 121-225 1-99 (282)
61 2qrd_G Protein C1556.08C; AMPK 99.5 2.3E-14 7.9E-19 139.1 12.3 103 119-225 180-296 (334)
62 1me8_A Inosine-5'-monophosphat 99.5 1E-15 3.5E-20 159.5 1.9 136 81-225 61-202 (503)
63 4avf_A Inosine-5'-monophosphat 99.5 1.5E-15 5E-20 157.9 0.9 130 81-225 52-188 (490)
64 2cu0_A Inosine-5'-monophosphat 99.5 2.3E-15 8E-20 156.0 1.9 128 81-225 57-189 (486)
65 2v8q_E 5'-AMP-activated protei 99.5 9E-14 3.1E-18 134.8 12.8 103 120-225 189-304 (330)
66 1vrd_A Inosine-5'-monophosphat 99.4 7.9E-14 2.7E-18 144.5 2.0 112 104-225 82-196 (494)
67 4af0_A Inosine-5'-monophosphat 99.2 1.4E-12 4.7E-17 135.4 1.8 110 106-225 128-239 (556)
68 1jcn_A Inosine monophosphate d 99.2 2.6E-13 8.8E-18 141.5 -4.1 102 122-226 109-215 (514)
69 3ghd_A A cystathionine beta-sy 98.9 1.3E-09 4.5E-14 83.9 5.6 65 132-199 1-70 (70)
70 3fio_A A cystathionine beta-sy 98.6 3.2E-08 1.1E-12 74.1 5.6 64 133-199 2-70 (70)
71 1vr9_A CBS domain protein/ACT 98.6 2E-08 6.9E-13 92.2 4.3 102 120-226 71-173 (213)
72 4esy_A CBS domain containing m 98.4 1.2E-07 4E-12 83.4 4.3 41 185-225 17-57 (170)
73 3ghd_A A cystathionine beta-sy 98.3 1.5E-06 5E-11 66.6 6.2 30 196-225 2-31 (70)
74 3l2b_A Probable manganase-depe 98.2 1.7E-06 5.7E-11 80.4 7.6 41 185-225 6-46 (245)
75 3kpb_A Uncharacterized protein 98.2 1.5E-06 5.1E-11 71.2 5.7 60 119-182 60-119 (122)
76 3lv9_A Putative transporter; C 98.2 3.4E-06 1.2E-10 71.9 8.0 41 185-225 22-64 (148)
77 4fry_A Putative signal-transdu 98.2 1E-06 3.5E-11 75.7 4.2 61 118-183 75-135 (157)
78 3fv6_A YQZB protein; CBS domai 98.1 1.6E-06 5.4E-11 75.1 4.7 63 117-181 77-142 (159)
79 2yzi_A Hypothetical protein PH 98.1 4.2E-06 1.4E-10 70.1 7.1 40 186-225 7-46 (138)
80 3k2v_A Putative D-arabinose 5- 98.1 4.8E-06 1.7E-10 71.1 7.6 40 186-225 28-69 (149)
81 3fio_A A cystathionine beta-sy 98.1 5.1E-06 1.7E-10 61.8 6.7 31 195-225 1-31 (70)
82 2ef7_A Hypothetical protein ST 98.1 1.6E-06 5.4E-11 72.2 4.0 59 120-182 66-124 (133)
83 3ctu_A CBS domain protein; str 98.1 4.7E-06 1.6E-10 71.5 7.0 40 186-225 15-56 (156)
84 2o16_A Acetoin utilization pro 98.1 4.8E-06 1.7E-10 72.2 7.1 40 186-225 5-44 (160)
85 3lhh_A CBS domain protein; str 98.1 6E-06 2E-10 72.7 7.6 73 102-181 90-162 (172)
86 2rih_A Conserved protein with 98.1 6.3E-06 2.2E-10 69.5 7.3 40 186-225 5-44 (141)
87 3gby_A Uncharacterized protein 98.1 5.2E-06 1.8E-10 69.0 6.4 41 185-225 4-44 (128)
88 2d4z_A Chloride channel protei 98.1 6.3E-06 2.1E-10 78.3 7.8 41 185-225 12-52 (250)
89 3lfr_A Putative metal ION tran 98.1 3.7E-06 1.3E-10 70.9 5.4 59 119-182 68-126 (136)
90 2rc3_A CBS domain; in SITU pro 98.1 3.1E-06 1.1E-10 70.7 4.9 60 118-182 71-130 (135)
91 3oco_A Hemolysin-like protein 98.1 4.7E-06 1.6E-10 71.6 6.1 58 120-182 85-142 (153)
92 1pbj_A Hypothetical protein; s 98.1 8.4E-06 2.9E-10 66.7 7.3 39 187-225 2-40 (125)
93 1pvm_A Conserved hypothetical 98.0 6.4E-06 2.2E-10 73.1 6.9 62 118-183 72-133 (184)
94 4gqw_A CBS domain-containing p 98.0 2.3E-06 7.7E-11 72.4 3.7 61 118-182 82-142 (152)
95 3k6e_A CBS domain protein; str 98.0 7.3E-06 2.5E-10 71.5 7.1 39 187-225 16-56 (156)
96 2p9m_A Hypothetical protein MJ 98.0 7.6E-06 2.6E-10 68.3 6.9 40 186-225 8-47 (138)
97 3lqn_A CBS domain protein; csg 98.0 5.5E-06 1.9E-10 70.4 5.9 41 185-225 14-56 (150)
98 3jtf_A Magnesium and cobalt ef 98.0 4E-06 1.4E-10 70.0 4.8 58 119-181 67-124 (129)
99 3sl7_A CBS domain-containing p 98.0 3.9E-06 1.3E-10 73.2 4.6 61 117-181 94-154 (180)
100 1o50_A CBS domain-containing p 98.0 4.5E-06 1.6E-10 71.9 4.8 60 118-182 93-152 (157)
101 1yav_A Hypothetical protein BS 98.0 9.2E-06 3.1E-10 70.0 6.6 41 185-225 13-55 (159)
102 3i8n_A Uncharacterized protein 98.0 7.8E-06 2.7E-10 68.2 5.9 58 119-181 70-127 (130)
103 2uv4_A 5'-AMP-activated protei 98.0 8.5E-06 2.9E-10 69.8 6.2 61 119-181 85-149 (152)
104 3nqr_A Magnesium and cobalt ef 98.0 5.2E-06 1.8E-10 68.9 4.6 58 119-181 67-124 (127)
105 3fhm_A Uncharacterized protein 98.0 1.1E-05 3.8E-10 70.1 6.8 41 185-225 23-66 (165)
106 2emq_A Hypothetical conserved 98.0 1E-05 3.5E-10 69.2 6.2 41 185-225 10-52 (157)
107 3hf7_A Uncharacterized CBS-dom 98.0 6.8E-06 2.3E-10 68.9 5.0 58 119-181 68-125 (130)
108 2nyc_A Nuclear protein SNF4; b 97.9 1.6E-05 5.6E-10 66.5 7.3 40 186-225 8-50 (144)
109 1y5h_A Hypothetical protein RV 97.9 8.5E-06 2.9E-10 67.7 5.4 40 186-225 8-47 (133)
110 2pfi_A Chloride channel protei 97.9 1.9E-05 6.4E-10 67.7 7.2 41 185-225 12-52 (164)
111 1me8_A Inosine-5'-monophosphat 97.9 5.1E-06 1.7E-10 86.4 4.0 100 119-222 159-260 (503)
112 3oi8_A Uncharacterized protein 97.9 8.9E-06 3E-10 70.3 4.8 55 119-178 101-155 (156)
113 3kxr_A Magnesium transporter, 97.9 9E-06 3.1E-10 74.4 4.8 62 118-183 113-174 (205)
114 3ocm_A Putative membrane prote 97.9 2.5E-05 8.7E-10 69.2 7.6 41 185-225 35-77 (173)
115 2j9l_A Chloride channel protei 97.8 2.3E-05 7.8E-10 68.7 6.5 40 185-224 10-55 (185)
116 3usb_A Inosine-5'-monophosphat 97.8 4.8E-05 1.6E-09 79.2 8.5 104 118-225 172-277 (511)
117 3pc3_A CG1753, isoform A; CBS, 97.6 5.4E-05 1.8E-09 78.8 6.8 40 185-224 383-423 (527)
118 2yvy_A MGTE, Mg2+ transporter 97.6 2.8E-05 9.7E-10 73.9 4.3 62 118-183 196-257 (278)
119 2oux_A Magnesium transporter; 97.5 3.9E-05 1.3E-09 73.5 3.8 61 118-182 198-258 (286)
120 3org_A CMCLC; transporter, tra 97.4 8.7E-05 3E-09 79.1 4.8 57 122-183 569-625 (632)
121 4avf_A Inosine-5'-monophosphat 97.4 9.5E-05 3.3E-09 76.6 4.5 100 119-221 145-246 (490)
122 2zy9_A Mg2+ transporter MGTE; 97.3 0.00014 4.6E-09 75.0 4.7 61 118-182 216-276 (473)
123 1vrd_A Inosine-5'-monophosphat 97.2 0.00018 6.1E-09 74.2 4.3 100 119-222 153-255 (494)
124 4fxs_A Inosine-5'-monophosphat 97.2 0.00013 4.3E-09 75.8 2.7 61 119-181 147-207 (496)
125 1jcn_A Inosine monophosphate d 97.1 0.00027 9.2E-09 73.4 4.0 99 119-221 171-272 (514)
126 4af0_A Inosine-5'-monophosphat 97.0 0.00031 1E-08 73.2 3.1 59 119-181 198-256 (556)
127 2cu0_A Inosine-5'-monophosphat 96.9 0.00059 2E-08 70.4 4.8 99 119-225 148-248 (486)
128 1zfj_A Inosine monophosphate d 96.8 0.0034 1.2E-07 64.5 9.0 100 119-222 150-251 (491)
No 1
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.95 E-value=1.5e-28 Score=219.46 Aligned_cols=140 Identities=24% Similarity=0.438 Sum_probs=94.5
Q ss_pred ccccHHHHHHHHHhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceec
Q 015908 80 VLLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVP 159 (398)
Q Consensus 80 ~~~s~eEL~~Lv~l~~~e~~e~G~L~~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlP 159 (398)
..+|++||+.+++ ++.+.|.++++|++++++++.|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++|
T Consensus 5 ~~~t~~el~~l~~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~p 79 (172)
T 3lhh_A 5 DNVTQEDIQAMLQ----EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRFP 79 (172)
T ss_dssp ------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEEE
T ss_pred ccCCHHHHHHHHH----HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEE
Confidence 4689999999998 45678999999999999999999999999999988899999999999 999999999999999
Q ss_pred cccCCCCcEEEEEEchhhhcccccc-cccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 160 VYSGNPTNIIGLILVKNLLSVDYRD-AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 160 Vvd~d~~~IVGIVs~kDLl~~~~~~-~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
|++++.++++|+|+.+|+++....+ ..+++++| +++++|++++++.++++.|.+++.+++||+|+
T Consensus 80 Vvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~ 145 (172)
T 3lhh_A 80 VCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDE 145 (172)
T ss_dssp EESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECT
T ss_pred EEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 9987547999999999999875433 56899998 99999999999999999999999999999998
No 2
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.94 E-value=8.7e-27 Score=204.68 Aligned_cols=139 Identities=20% Similarity=0.356 Sum_probs=127.3
Q ss_pred cccHHHHHHHHHhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceecc
Q 015908 81 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPV 160 (398)
Q Consensus 81 ~~s~eEL~~Lv~l~~~e~~e~G~L~~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPV 160 (398)
.+|++||+.+++. +.++|.++++|++++++++.|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||
T Consensus 2 ~~t~~el~~li~~----~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLRQ----AHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHHH----HHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHHh----HHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 3789999999984 5678999999999999999999999999999988899999999999 9999999999999999
Q ss_pred ccCCCCcEEEEEEchhhhccccc-ccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 161 YSGNPTNIIGLILVKNLLSVDYR-DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 161 vd~d~~~IVGIVs~kDLl~~~~~-~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
++++.++++|+|+.+|++++... ...+++++| +++.+|++++++.++++.|.+++.+++||+|+
T Consensus 77 vd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~ 141 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLKYMFNPEQFHLKSIL-RPAVFVPEGKSLTALLKEFREQRNHMAIVIDE 141 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHC-BCCCEEETTSBHHHHHHHHHHTTCCEEEEECT
T ss_pred EcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHc-CCCEEECCCCCHHHHHHHHHhcCCeEEEEECC
Confidence 98764599999999999987544 356899997 56899999999999999999999999999998
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.94 E-value=1.6e-26 Score=207.85 Aligned_cols=154 Identities=19% Similarity=0.295 Sum_probs=135.8
Q ss_pred cccCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhh
Q 015908 98 AGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNL 177 (398)
Q Consensus 98 ~~e~G~L~~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDL 177 (398)
+.++|.|+++|++++++++.|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+||
T Consensus 13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl 91 (173)
T 3ocm_A 13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDL 91 (173)
T ss_dssp -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHH
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHH
Confidence 4567999999999999999999999999999988899999999999 999999999999999998755799999999999
Q ss_pred hccccc-ccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccccccccccCCCCCCCCCCCCccccccc
Q 015908 178 LSVDYR-DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKSSQKVDNG 256 (398)
Q Consensus 178 l~~~~~-~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (398)
+..... ...+++ |++++++|++++++.++++.|.+++.+++||+|+
T Consensus 92 ~~~~~~~~~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde------------------------------- 138 (173)
T 3ocm_A 92 VADLITEGRVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADE------------------------------- 138 (173)
T ss_dssp HHHHHHHSSCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECT-------------------------------
T ss_pred HHHHhcCCcchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeC-------------------------------
Confidence 976432 245777 5689999999999999999999999999999998
Q ss_pred cccccccccccccchhhhcccCCCCCCCccccCCCCCCcccccCCCCCCCCCCCCCceEEEEeHHHHHHHHHhchhccch
Q 015908 257 VTAAGQNLRNKLESKDAQQTKKVPPATPTFNKRHRGCSYCILDFENGPFPDFPSNDEAVGVITMEDVIEELLQEEILDET 336 (398)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGiit~~Dvie~l~~~ei~de~ 336 (398)
+|+++||||++||+++|+ .|+.||.
T Consensus 139 ------------------------------------------------------~g~lvGiIT~~Dil~~l~-~~i~de~ 163 (173)
T 3ocm_A 139 ------------------------------------------------------FGAIEGLVTPIDVFEAIA-GEFPDED 163 (173)
T ss_dssp ------------------------------------------------------TCCEEEEECHHHHHHHHH-CCCCCTT
T ss_pred ------------------------------------------------------CCCEEEEEeHHHHHHHHh-CcCCCcc
Confidence 489999999999999998 5999998
Q ss_pred hhhh
Q 015908 337 DEYV 340 (398)
Q Consensus 337 d~~~ 340 (398)
|.+.
T Consensus 164 ~~~~ 167 (173)
T 3ocm_A 164 ELPD 167 (173)
T ss_dssp SCC-
T ss_pred ccHh
Confidence 8754
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.93 E-value=1.6e-25 Score=193.77 Aligned_cols=124 Identities=20% Similarity=0.413 Sum_probs=100.3
Q ss_pred cCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhc
Q 015908 100 KGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS 179 (398)
Q Consensus 100 e~G~L~~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~ 179 (398)
++|.++++|++++++++.|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~ 80 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYN 80 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHH
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHH
Confidence 56889999999999999999999999999988899999999999 99999999999999999875479999999999998
Q ss_pred ccccc-cccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 180 VDYRD-AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 180 ~~~~~-~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..... ..+++++| +++.+|++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 126 (148)
T 3lv9_A 81 QKINENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDE 126 (148)
T ss_dssp HHHHHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHhcCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeC
Confidence 75433 57899998 99999999999999999999999999999998
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.91 E-value=2.6e-25 Score=194.07 Aligned_cols=120 Identities=23% Similarity=0.386 Sum_probs=106.1
Q ss_pred CCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccc-cCCCCcEEEEEEchhhhcccc
Q 015908 104 LTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVY-SGNPTNIIGLILVKNLLSVDY 182 (398)
Q Consensus 104 L~~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVv-d~d~~~IVGIVs~kDLl~~~~ 182 (398)
|+++|++++++++.|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||+ +++.++++|+|+.+||++...
T Consensus 3 l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~ 81 (153)
T 3oco_A 3 ADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR 81 (153)
T ss_dssp -----CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH
T ss_pred cCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh
Confidence 6788999999999999999999999888899999999999 99999999999999999 654479999999999987643
Q ss_pred cc-cccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 183 RD-AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 183 ~~-~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.+ ..+++++| +++++|++++++.++++.|.+++.+.+||+|+
T Consensus 82 ~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 124 (153)
T 3oco_A 82 IDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDE 124 (153)
T ss_dssp HHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECT
T ss_pred cCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeC
Confidence 32 56899998 99999999999999999999999999999998
No 6
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.89 E-value=4.1e-22 Score=184.19 Aligned_cols=128 Identities=9% Similarity=0.086 Sum_probs=114.5
Q ss_pred ccHHHHHHHHHhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHc---CCcee
Q 015908 82 LRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTM---GHSRV 158 (398)
Q Consensus 82 ~s~eEL~~Lv~l~~~e~~e~G~L~~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~---~~srl 158 (398)
+..++.+.++.. ++++|++++++++.|.+.+|+++|++ +++++++++|+. ++++.|+++ +++.+
T Consensus 25 l~~~~~~~~l~~----------l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~ 91 (205)
T 3kxr_A 25 LPESFTDRALAQ----------MGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNL 91 (205)
T ss_dssp SCHHHHHHHHHH----------SCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEE
T ss_pred CCHHHHHHHHHc----------CCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEE
Confidence 445566666652 78999999999999999999999997 788999999999 999999987 78999
Q ss_pred ccccCCCCcEEEEEEchhhhcccccccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 159 PVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 159 PVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
||++++ ++++|+|+.+||+.... ..+++++|.+++++|++++++.++++.|.+++.+.+||||+
T Consensus 92 ~Vvd~~-~~lvGivt~~dll~~~~--~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~ 155 (205)
T 3kxr_A 92 FIVDEA-DKYLGTVRRYDIFKHEP--HEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDD 155 (205)
T ss_dssp EEECTT-CBEEEEEEHHHHTTSCT--TSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECT
T ss_pred EEEcCC-CeEEEEEEHHHHHhCCC--cchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcC
Confidence 999875 89999999999987643 45899999899999999999999999999999999999998
No 7
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.88 E-value=6.2e-23 Score=175.80 Aligned_cols=104 Identities=30% Similarity=0.509 Sum_probs=93.6
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc---cccccchhhhccCC
Q 015908 120 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY---RDAVPLRKMIIRRI 196 (398)
Q Consensus 120 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~---~~~~~V~eIM~r~~ 196 (398)
+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+||++... ....+++++| +++
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m-~~~ 79 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLL-RPA 79 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTC-BCC
T ss_pred CCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHc-CCC
Confidence 678999999988899999999999 99999999999999999875479999999999998753 2256899997 568
Q ss_pred cEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 197 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 197 ~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.+|++++++.++++.|.+++.+++||+|+
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 108 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVIDE 108 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEECT
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeC
Confidence 99999999999999999999999999998
No 8
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.88 E-value=2.4e-22 Score=170.45 Aligned_cols=106 Identities=34% Similarity=0.539 Sum_probs=95.8
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccccccchhhhccCCc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP 197 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~~~ 197 (398)
..+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++.......+++++| +++.
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~m-~~~~ 79 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSLV-RPAV 79 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGGC-BCCC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHHh-CCCe
Confidence 46789999999988899999999999 999999999999999998744799999999999987655567899996 6688
Q ss_pred EEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 198 RVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 198 ~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
++++++++.++++.|.+++.+.+||+|+
T Consensus 80 ~v~~~~~l~~~~~~m~~~~~~~~pVvd~ 107 (129)
T 3jtf_A 80 FIPEVKRLNVLLREFRASRNHLAIVIDE 107 (129)
T ss_dssp EEETTCBHHHHHHHHHTSSCCEEEEECC
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEeC
Confidence 9999999999999999999999999998
No 9
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.87 E-value=9.3e-23 Score=180.31 Aligned_cols=111 Identities=17% Similarity=0.251 Sum_probs=95.6
Q ss_pred HHHHHhc-CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc------
Q 015908 111 IIAGALE-LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR------ 183 (398)
Q Consensus 111 ~I~~~l~-L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~------ 183 (398)
||.+.++ |-..+++++|+|+.+++++++++|+. +|+++|.+++++++||+|++ ++++|+|+.+|++++...
T Consensus 4 mi~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd~~-~~lvGiit~~Di~~~~~~~~~~~~ 81 (156)
T 3k6e_A 4 MIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQE 81 (156)
T ss_dssp HHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHH
T ss_pred hHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEecchhhhhhhcccccc
Confidence 4444443 55568999999999999999999999 99999999999999999875 899999999999865321
Q ss_pred --ccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 184 --DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 184 --~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
...+++++|.+++.++++++++.++++.|.+++ ++||||+
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~ 123 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA 123 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECT
T ss_pred cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEec
Confidence 146899999999999999999999999998765 5999998
No 10
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.87 E-value=2.8e-22 Score=170.63 Aligned_cols=104 Identities=17% Similarity=0.322 Sum_probs=93.8
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccc----cccchhhhccC
Q 015908 120 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD----AVPLRKMIIRR 195 (398)
Q Consensus 120 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~----~~~V~eIM~r~ 195 (398)
+++|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++++...+ ..+++++| ++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~~ 78 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-DE 78 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-BC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc-cC
Confidence 368999999988899999999999 9999999999999999976448999999999998875443 24689997 88
Q ss_pred CcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 196 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 196 ~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+.+|++++++.++++.|.+++.+.+||+|+
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 108 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKFQRNKKKVGLVVDE 108 (130)
T ss_dssp CCEEETTCBHHHHHHHHHHHCCCEEEEECT
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEcC
Confidence 999999999999999999999999999998
No 11
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.87 E-value=2.2e-22 Score=170.56 Aligned_cols=107 Identities=22% Similarity=0.336 Sum_probs=93.3
Q ss_pred cCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccc--cccchhhhcc
Q 015908 117 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD--AVPLRKMIIR 194 (398)
Q Consensus 117 ~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~--~~~V~eIM~r 194 (398)
+|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++....+ ..+++++| +
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m-~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVM-R 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHS-E
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHh-c
Confidence 468899999999988889999999999 9999999999999999987557999999999998875332 56899997 6
Q ss_pred CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 195 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 195 ~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
++.++++++++.++++.|.+++.+.+||+|+
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 110 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVDE 110 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEECT
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcC
Confidence 7899999999999999999999999999998
No 12
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.86 E-value=1.2e-21 Score=165.40 Aligned_cols=104 Identities=30% Similarity=0.513 Sum_probs=93.2
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc--ccccchhhhccCCc
Q 015908 120 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR--DAVPLRKMIIRRIP 197 (398)
Q Consensus 120 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~--~~~~V~eIM~r~~~ 197 (398)
+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++.... ...+++++| +++.
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m-~~~~ 79 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVL-RTAV 79 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHC-BCCC
T ss_pred CcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHc-CCCe
Confidence 678999999877789999999999 999999999999999998754799999999999976432 356899997 6688
Q ss_pred EEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 198 RVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 198 ~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
++++++++.++++.|.+++.+.+||+|+
T Consensus 80 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 107 (127)
T 3nqr_A 80 VVPESKRVDRMLKEFRSQRYHMAIVIDE 107 (127)
T ss_dssp EEETTCBHHHHHHHHHHTTCCEEEEECT
T ss_pred EECCCCcHHHHHHHHHhcCCeEEEEEeC
Confidence 9999999999999999999999999997
No 13
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.86 E-value=1.4e-21 Score=173.58 Aligned_cols=113 Identities=16% Similarity=0.252 Sum_probs=98.1
Q ss_pred HHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc---
Q 015908 107 DETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR--- 183 (398)
Q Consensus 107 eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~--- 183 (398)
.+++.+.+. +.+++|+|+|++ +++++++++|+. ++++.|.+++++++||+|++ |+++|+|+.+|+++....
T Consensus 6 ~~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~ 79 (170)
T 4esy_A 6 ARRRAIARA--IRQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWI 79 (170)
T ss_dssp HHHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTH
T ss_pred HHHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhccc
Confidence 344455554 468899999986 788999999999 99999999999999999876 899999999999865321
Q ss_pred -----------------------ccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 184 -----------------------DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 184 -----------------------~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
...+++++|.+++++|++++++.+|++.|.+++.+.+||+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~ 144 (170)
T 4esy_A 80 YEASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD 144 (170)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET
T ss_pred cchhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC
Confidence 135789999999999999999999999999999999999987
No 14
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.82 E-value=3.8e-20 Score=177.78 Aligned_cols=118 Identities=13% Similarity=0.150 Sum_probs=108.9
Q ss_pred CCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHc-----CCceeccccCCCCcEEEEEEchh
Q 015908 102 GDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTM-----GHSRVPVYSGNPTNIIGLILVKN 176 (398)
Q Consensus 102 G~L~~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~-----~~srlPVvd~d~~~IVGIVs~kD 176 (398)
+.++..++..+.+++.+.+.+|+++|++ +++++++++++. ++++.|+++ +++++||++++ ++++|+|+.+|
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~d 191 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRD 191 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccCCccceeEEEEECCC-CCEEEEEEHHH
Confidence 4688899999999999999999999997 788999999999 999999987 78999999876 89999999999
Q ss_pred hhcccccccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 177 LLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 177 Ll~~~~~~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
++.... ..+++++|.+++++|++++++.++++.|.+++.+.+||||+
T Consensus 192 ll~~~~--~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 238 (278)
T 2yvy_A 192 LIVADP--RTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE 238 (278)
T ss_dssp HHHSCT--TCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HhcCCC--CCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeC
Confidence 987643 45899999899999999999999999999999999999998
No 15
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.82 E-value=9.9e-20 Score=188.39 Aligned_cols=135 Identities=13% Similarity=0.136 Sum_probs=120.8
Q ss_pred cccHHHHHHHHHhhccccccC---------CCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHH
Q 015908 81 LLRRAELKTFVNFHGNEAGKG---------GDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIM 151 (398)
Q Consensus 81 ~~s~eEL~~Lv~l~~~e~~e~---------G~L~~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~ 151 (398)
.++.+|+..+++.. .++ +.+++++++++++++++.+.+|+++|++ +++++++++|+. ++++.|+
T Consensus 110 ~l~~dd~~~ll~~l----~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQAV----RKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHHH----HHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHhC----CHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 46778888888742 334 7899999999999999999999999996 799999999999 9999999
Q ss_pred Hc-----CCceeccccCCCCcEEEEEEchhhhcccccccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 152 TM-----GHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 152 ~~-----~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
++ +++++||+|++ ++++|+|+.+|++.... +.+++++|.+++++|++++++.++++.|++++.+.+||||+
T Consensus 183 ~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~~~--~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe 258 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVADP--RTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE 258 (473)
T ss_dssp HHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHSCT--TSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hccCCcCceeEEEEECCC-CcEEEEEEHHHHhcCCC--CCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcC
Confidence 87 47999999876 89999999999987643 45899999899999999999999999999999999999998
No 16
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.80 E-value=3.9e-19 Score=171.98 Aligned_cols=118 Identities=17% Similarity=0.171 Sum_probs=108.7
Q ss_pred CCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHc-----CCceeccccCCCCcEEEEEEchh
Q 015908 102 GDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTM-----GHSRVPVYSGNPTNIIGLILVKN 176 (398)
Q Consensus 102 G~L~~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~-----~~srlPVvd~d~~~IVGIVs~kD 176 (398)
+.|+.+++..+.+++.+.+.+|+++|++ +++++++++|+. ++++.|+++ +++++||+|++ ++++|+|+.+|
T Consensus 118 ~~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~d 193 (286)
T 2oux_A 118 SLLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRD 193 (286)
T ss_dssp HTSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHH
Confidence 3578899999999999999999999996 788999999999 999999988 88999999875 89999999999
Q ss_pred hhcccccccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 177 LLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 177 Ll~~~~~~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
++.... ..+++++|.+++++|++++++.++++.|.+++.+.+||||+
T Consensus 194 ll~~~~--~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~ 240 (286)
T 2oux_A 194 LIVNDD--DTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDY 240 (286)
T ss_dssp HTTSCT--TSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHcCCC--CCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcC
Confidence 997643 45899999899999999999999999999999999999997
No 17
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.79 E-value=5.9e-19 Score=151.33 Aligned_cols=105 Identities=16% Similarity=0.163 Sum_probs=93.8
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc----------------
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY---------------- 182 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~---------------- 182 (398)
...+|+++|+++.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~ 80 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLS 80 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----CCHHHHHHHTC--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCcccchHHHHHHHH
Confidence 4578999999877889999999999 99999999999999999876 89999999999986421
Q ss_pred -cccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 183 -RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 183 -~~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
....++.++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~ 124 (152)
T 4gqw_A 81 KTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDS 124 (152)
T ss_dssp ---CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECT
T ss_pred HhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECC
Confidence 1246899999988999999999999999999999999999997
No 18
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.79 E-value=1.7e-19 Score=156.86 Aligned_cols=109 Identities=15% Similarity=0.198 Sum_probs=95.8
Q ss_pred HHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccc--------
Q 015908 113 AGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-------- 184 (398)
Q Consensus 113 ~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~-------- 184 (398)
.....+...+|+++|+|+.+++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++.....
T Consensus 7 ~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~ 84 (156)
T 3ctu_A 7 KEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIMA 84 (156)
T ss_dssp HHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHT
T ss_pred HHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECCC-CEEEEEEcHHHHHHHHHhccccccccc
Confidence 3445677788999999988999999999999 99999999999999999876 8999999999998764321
Q ss_pred cccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 ~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..+++++|.+++.++++++++.++++.|.+++ .+||+|+
T Consensus 85 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~ 123 (156)
T 3ctu_A 85 DTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA 123 (156)
T ss_dssp TSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECT
T ss_pred cCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcC
Confidence 46899999899999999999999999999886 6999987
No 19
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.78 E-value=5.1e-19 Score=147.02 Aligned_cols=101 Identities=12% Similarity=0.246 Sum_probs=92.7
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccccccchhhhccCCcEEc
Q 015908 121 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVS 200 (398)
Q Consensus 121 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~~~~V~ 200 (398)
++|+++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++....+..+++++|.+++.+++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~ 76 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDEH-GKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAH 76 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECTT-SBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEE
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEEC
Confidence 478999996 678899999999 99999999999999999865 89999999999998765555689999989999999
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 201 EDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 201 ~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+++++.++++.|.+++.+.+||+|+
T Consensus 77 ~~~~l~~~~~~~~~~~~~~l~Vvd~ 101 (122)
T 3kpb_A 77 EDEPVDHVAIKMSKYNISGVPVVDD 101 (122)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CCCCHHHHHHHHHHhCCCeEEEECC
Confidence 9999999999999999999999998
No 20
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.78 E-value=9.2e-19 Score=151.93 Aligned_cols=110 Identities=20% Similarity=0.257 Sum_probs=92.1
Q ss_pred HHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc--------
Q 015908 112 IAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-------- 183 (398)
Q Consensus 112 I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~-------- 183 (398)
..+...+...+|+++|+++.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++....
T Consensus 2 ~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~ 79 (157)
T 2emq_A 2 TWEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDTS-YKLHGLISMTMMMDAILGLERIEFER 79 (157)
T ss_dssp --------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECTT-CCEEEEEEHHHHHHHSBCSSSBCGGG
T ss_pred chhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcCC-CCEEEEeeHHHHHHHHhcccccchHH
Confidence 34556678899999999766788999999999 99999999999999999875 899999999999876432
Q ss_pred -ccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 184 -DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 184 -~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
...++.++|.+++.++++++++.++++.|.+++. +||+|+
T Consensus 80 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~ 120 (157)
T 2emq_A 80 LETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEND 120 (157)
T ss_dssp GGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECS
T ss_pred hcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcC
Confidence 2568999999999999999999999999999987 999987
No 21
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.78 E-value=6.2e-19 Score=155.88 Aligned_cols=104 Identities=17% Similarity=0.192 Sum_probs=93.1
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccc------------------
Q 015908 120 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD------------------ 181 (398)
Q Consensus 120 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~------------------ 181 (398)
.++|+++|+++.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+||++..
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC-------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 468999999877889999999999 99999999999999999876 8999999999998531
Q ss_pred -------------ccccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 182 -------------YRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 182 -------------~~~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.....+++++|.+++++|++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 137 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDA 137 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECT
T ss_pred hhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 11245899999998999999999999999999999999999997
No 22
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.77 E-value=5.4e-19 Score=152.51 Aligned_cols=105 Identities=17% Similarity=0.213 Sum_probs=93.9
Q ss_pred cCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc---------cccc
Q 015908 117 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------DAVP 187 (398)
Q Consensus 117 ~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~---------~~~~ 187 (398)
.|.+++|+++|+|..+++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+||++.... ...+
T Consensus 11 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~ 88 (150)
T 3lqn_A 11 EFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDPM-YKLHGLISTAMILDGILGLERIEFERLEEMK 88 (150)
T ss_dssp HHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHTBCSSSBCGGGGGGCB
T ss_pred hhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECCC-CCEEEEEEHHHHHHHHHhhcccchhHHhcCC
Confidence 467889999999866789999999999 99999999999999999875 899999999999875421 2468
Q ss_pred chhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 188 LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 188 V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+.++|.+++.++++++++.++++.|.+++. +||+|+
T Consensus 89 v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~ 124 (150)
T 3lqn_A 89 VEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNE 124 (150)
T ss_dssp GGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECT
T ss_pred HHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECC
Confidence 999999999999999999999999999886 999987
No 23
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.77 E-value=5.5e-19 Score=155.73 Aligned_cols=110 Identities=9% Similarity=0.124 Sum_probs=97.6
Q ss_pred HHhcCcccccccccccC-ccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc-----cccc
Q 015908 114 GALELTEKTAKDAMTPI-SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVP 187 (398)
Q Consensus 114 ~~l~L~~~tV~dIMtPr-~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~-----~~~~ 187 (398)
....+..++|+++|+|+ .+++++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|+++.... ...+
T Consensus 17 ~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~ 94 (165)
T 3fhm_A 17 LYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGAASLQQS 94 (165)
T ss_dssp CCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGGGGGTSB
T ss_pred hhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCCccccCC
Confidence 34467889999999974 4688999999999 99999999999999999976 899999999999875322 2468
Q ss_pred chhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 188 LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 188 V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
++++|.+++.+|++++++.++++.|.+++.+.+||+|+
T Consensus 95 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 132 (165)
T 3fhm_A 95 VSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN 132 (165)
T ss_dssp GGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred HHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 99999999999999999999999999999999999987
No 24
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.76 E-value=4.3e-18 Score=144.56 Aligned_cols=105 Identities=13% Similarity=0.275 Sum_probs=92.9
Q ss_pred hcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhc-cccc---ccccchhh
Q 015908 116 LELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS-VDYR---DAVPLRKM 191 (398)
Q Consensus 116 l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~-~~~~---~~~~V~eI 191 (398)
+.|...+|+++|++ ++.++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|+++ .... ...++.++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~ 77 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVINDD-GNVVGFFTKSDIIRRVIVPGLPYDIPVERI 77 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCCCTTSBGGGT
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHhcCCcccCCHHHH
Confidence 46788999999985 678999999999 99999999999999999865 89999999999973 3221 24689999
Q ss_pred hccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 192 IIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 192 M~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
|.+++.++++++++.++++.|.+++.+.+ |+|+
T Consensus 78 m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~ 110 (138)
T 2yzi_A 78 MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEE 110 (138)
T ss_dssp CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEE
T ss_pred hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECC
Confidence 98999999999999999999999999999 9997
No 25
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.76 E-value=2.8e-18 Score=144.83 Aligned_cols=103 Identities=17% Similarity=0.252 Sum_probs=92.7
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccc---cccchhhhcc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD---AVPLRKMIIR 194 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~---~~~V~eIM~r 194 (398)
|.+.+|+++|++ ++.++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++.....+ ..+++++|.+
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD-G-NKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC
Confidence 467899999996 578899999999 999999999999999999 4 8999999999998754322 4689999988
Q ss_pred CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 195 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 195 ~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
++.++++++++.++++.|.+++.+.+||+|+
T Consensus 76 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~ 106 (133)
T 2ef7_A 76 SLITIREDSPITGALALMRQFNIRHLPVVDD 106 (133)
T ss_dssp CCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEECC
Confidence 9999999999999999999999999999987
No 26
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.75 E-value=1.3e-18 Score=150.67 Aligned_cols=103 Identities=22% Similarity=0.212 Sum_probs=94.1
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc----ccccchhhhccCC
Q 015908 121 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMIIRRI 196 (398)
Q Consensus 121 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~----~~~~V~eIM~r~~ 196 (398)
++|+++|+++.+++++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|+++.... ...++.++|.+++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESC
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCC
Confidence 58999999866788999999999 99999999999999999876 899999999999876433 2468999999999
Q ss_pred cEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 197 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 197 ~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.+|++++++.++++.|.+++.+.+||+|+
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 134 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVADG 134 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEecC
Confidence 99999999999999999999999999998
No 27
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.75 E-value=2.9e-18 Score=149.77 Aligned_cols=105 Identities=19% Similarity=0.308 Sum_probs=93.1
Q ss_pred cCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc---------cccc
Q 015908 117 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------DAVP 187 (398)
Q Consensus 117 ~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~---------~~~~ 187 (398)
.+...+|+++|+++.+++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+||+..... ...+
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGLERIEFEKLDQIT 87 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCSSSBCGGGTTTSB
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhhcccchhhhccCC
Confidence 577899999999766788999999999 99999999999999999875 799999999999875422 2468
Q ss_pred chhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 188 LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 188 V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+.++|.+++.+|++++++.++++.|.+++. +||+|+
T Consensus 88 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~ 123 (159)
T 1yav_A 88 VEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVEND 123 (159)
T ss_dssp HHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECT
T ss_pred HHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeC
Confidence 999998999999999999999999998876 999987
No 28
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.75 E-value=3.8e-18 Score=143.77 Aligned_cols=102 Identities=14% Similarity=0.181 Sum_probs=92.6
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccc---cccchhhhccC
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD---AVPLRKMIIRR 195 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~---~~~V~eIM~r~ 195 (398)
...+|+++|++ ++.++++++++. ++++.|.+++++.+||+++ ++++|+|+.+|+++....+ ..+++++|.++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 77 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLET 77 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBC
T ss_pred cceEHHHhhcC--CcceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCC
Confidence 46799999986 577899999999 9999999999999999986 8999999999999875443 25699999999
Q ss_pred CcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 196 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 196 ~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+.++++++++.++++.|.+++.+.+||+|+
T Consensus 78 ~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~ 107 (128)
T 3gby_A 78 VRSYRPGEQLFDNLISVAAAKCSVVPLADE 107 (128)
T ss_dssp CCCBCTTSBGGGSHHHHHHCSSSEEEEECT
T ss_pred CcEECCCCCHHHHHHHHHhCCCcEEEEECC
Confidence 999999999999999999999999999987
No 29
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.75 E-value=4.4e-18 Score=148.12 Aligned_cols=102 Identities=9% Similarity=0.153 Sum_probs=91.5
Q ss_pred cccccccccC----ccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc-----ccccchhh
Q 015908 121 KTAKDAMTPI----SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRKM 191 (398)
Q Consensus 121 ~tV~dIMtPr----~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~-----~~~~V~eI 191 (398)
++|+|+|+++ .++.++++++++. ++++.|.+++++++||.+ + ++++|+|+.+|+++.... ...+++++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD-G-DDIAGIVTERDYARKVVLQERSSKATRVEEI 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES-S-SSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee-C-CEEEEEEEHHHHHHHHHhccCCccccCHHHH
Confidence 5799999987 6788999999999 999999999999999965 3 899999999999875322 25689999
Q ss_pred hccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 192 IIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 192 M~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 84 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 117 (157)
T 4fry_A 84 MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDG 117 (157)
T ss_dssp SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 9999999999999999999999999999999986
No 30
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.75 E-value=3.8e-18 Score=144.63 Aligned_cols=101 Identities=10% Similarity=0.181 Sum_probs=90.5
Q ss_pred ccccccccC-ccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhc-ccc----cccccchhhhccC
Q 015908 122 TAKDAMTPI-SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS-VDY----RDAVPLRKMIIRR 195 (398)
Q Consensus 122 tV~dIMtPr-~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~-~~~----~~~~~V~eIM~r~ 195 (398)
+|+++|+|+ .++.++++++++. ++++.|.+++++++||++ + ++++|+|+.+|+++ ... ....++.++|.++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 83 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK-D-EKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQ 83 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCS
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCC
Confidence 899999965 5788999999999 999999999999999998 4 89999999999985 322 1256899999999
Q ss_pred CcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 196 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 196 ~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+.++++++++.++++.|.+++.+.+||+|+
T Consensus 84 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 113 (135)
T 2rc3_A 84 VAYVDLNNTNEDCMALITEMRVRHLPVLDD 113 (135)
T ss_dssp CCCBCTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred CeEECCCCcHHHHHHHHHHhCCCEEEEEeC
Confidence 999999999999999999999999999986
No 31
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.74 E-value=8.1e-18 Score=142.65 Aligned_cols=104 Identities=13% Similarity=0.277 Sum_probs=92.1
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhh-hccccc---ccccchhhhc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNL-LSVDYR---DAVPLRKMII 193 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDL-l~~~~~---~~~~V~eIM~ 193 (398)
|.+.+|+++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+ ++.... ...+++++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRDKYTLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCcCHHHHhC
Confidence 567899999986 678899999999 99999999999999999875 899999999999 765322 2568999998
Q ss_pred cCCcEEcCCCCHHHHHHHHHhCC-----CcEEEEEec
Q 015908 194 RRIPRVSEDMPLYDILNEFQKGH-----SHIAVVYKD 225 (398)
Q Consensus 194 r~~~~V~~d~~l~daL~~m~~~~-----~~~apVVDe 225 (398)
+++.++++++++.++++.|.+++ .+.+||+|+
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~ 117 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK 117 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC
Confidence 89999999999999999999999 999999997
No 32
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.74 E-value=6.5e-18 Score=144.47 Aligned_cols=100 Identities=11% Similarity=0.126 Sum_probs=90.5
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCC--cEEEEEEchhhhccccc---ccccchhhhccC
Q 015908 121 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPT--NIIGLILVKNLLSVDYR---DAVPLRKMIIRR 195 (398)
Q Consensus 121 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~--~IVGIVs~kDLl~~~~~---~~~~V~eIM~r~ 195 (398)
.+|+++|++ ++.++++++++. ++++.|.+++++++||+|++ + +++|+|+.+|+++.... ...++.++|.++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTARD-NPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEETT-EEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCC
Confidence 689999986 788999999999 99999999999999999875 6 89999999999876422 246899999999
Q ss_pred CcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 196 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 196 ~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+.+++++ ++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~ 109 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVNK 109 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEECT
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEcC
Confidence 9999999 9999999999999999999997
No 33
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.73 E-value=1.7e-17 Score=145.28 Aligned_cols=103 Identities=17% Similarity=0.256 Sum_probs=92.0
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc----ccccchhhhc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMII 193 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~----~~~~V~eIM~ 193 (398)
+..++|+++|++ . +++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++.... ...+++++|.
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 88 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVY-DAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIGQQELTSVPVHIIMT 88 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSE
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhccCcccCcCHHHHHc
Confidence 467899999985 3 4899999999 99999999999999999865 899999999999875421 2568999998
Q ss_pred c--CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 194 R--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 194 r--~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+ ++.+|++++++.++++.|.+++.+.+||+|+
T Consensus 89 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 122 (159)
T 3fv6_A 89 RMPNITVCRREDYVMDIAKHLIEKQIDALPVIKD 122 (159)
T ss_dssp ETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE
T ss_pred CCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC
Confidence 7 8899999999999999999999999999998
No 34
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.73 E-value=1.3e-17 Score=138.87 Aligned_cols=100 Identities=16% Similarity=0.216 Sum_probs=89.6
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc----ccccchhhhccCC
Q 015908 121 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMIIRRI 196 (398)
Q Consensus 121 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~----~~~~V~eIM~r~~ 196 (398)
++|+++|++ ++.++++++++. ++++.|.+++++++||+| + ++++|+|+.+|+++.... ...+++++|.+++
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~ 75 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK-E-GVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDL 75 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE-T-TEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGG
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe-C-CeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCC
Confidence 478999986 678899999999 999999999999999999 4 899999999999865422 2468999998999
Q ss_pred cEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 197 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 197 ~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.++++++++.++++.|.+++.+.+||+|+
T Consensus 76 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~ 104 (125)
T 1pbj_A 76 VTISPRATIKEAAEKMVKNVVWRLLVEED 104 (125)
T ss_dssp GEECTTSCHHHHHHHHHHHTCSEEEEEET
T ss_pred eEECCCCCHHHHHHHHHhcCCcEEEEEEC
Confidence 99999999999999999999999999987
No 35
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.72 E-value=1.4e-17 Score=149.50 Aligned_cols=101 Identities=19% Similarity=0.275 Sum_probs=91.7
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc-----cccccchhhhccC
Q 015908 121 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY-----RDAVPLRKMIIRR 195 (398)
Q Consensus 121 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~-----~~~~~V~eIM~r~ 195 (398)
.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+||+.... ....+++++|.++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~ 84 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKP 84 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSS
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCC
Confidence 789999985 688999999999 99999999999999999865 89999999999987543 1256899999889
Q ss_pred CcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 196 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 196 ~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+.+|++++++.++++.|.+++.+.+||+|+
T Consensus 85 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 114 (184)
T 1pvm_A 85 IPKVKSDYDVKDVAAYLSENGLERCAVVDD 114 (184)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCSEEEEECT
T ss_pred CcEECCCCCHHHHHHHHHHcCCcEEEEEcC
Confidence 999999999999999999999999999998
No 36
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.72 E-value=1.6e-17 Score=161.44 Aligned_cols=122 Identities=12% Similarity=0.154 Sum_probs=104.7
Q ss_pred CCCHHHHHHHHHHhcC-cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccc
Q 015908 103 DLTHDETTIIAGALEL-TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 181 (398)
Q Consensus 103 ~L~~eE~~~I~~~l~L-~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~ 181 (398)
-++++|+++++++++| .+.+|+|+|+|+.++++++.++|+. ++++.|.+++++++||++++.++++|+|+.+|++...
T Consensus 3 ~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~ 81 (334)
T 2qrd_G 3 DVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVI 81 (334)
T ss_dssp SHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHH
Confidence 3567899999999995 4499999999999999999999999 9999999999999999987668999999999998643
Q ss_pred c--------cc------cccch-------hhhccCC--cEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 182 Y--------RD------AVPLR-------KMIIRRI--PRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 182 ~--------~~------~~~V~-------eIM~r~~--~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
. .. ..++. ++|.+++ +++++++++.++++.|.+++.+.+||+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 148 (334)
T 2qrd_G 82 KYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDV 148 (334)
T ss_dssp HHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEE
T ss_pred HHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeC
Confidence 1 11 22232 3467777 89999999999999999999999999998
No 37
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.72 E-value=9.5e-18 Score=141.57 Aligned_cols=103 Identities=15% Similarity=0.209 Sum_probs=90.5
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhh-ccccc----ccccchhhhc
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL-SVDYR----DAVPLRKMII 193 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl-~~~~~----~~~~V~eIM~ 193 (398)
.-.+|+++|++ ++.++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|++ +.... ...+++++|.
T Consensus 6 ~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 81 (133)
T 1y5h_A 6 TMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGLDPNTATAGELAR 81 (133)
T ss_dssp --CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHT
T ss_pred hhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCCCccccCHHHHhc
Confidence 44689999986 678899999999 99999999999999999865 8999999999998 34322 2468999998
Q ss_pred cCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 194 RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 194 r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 82 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 113 (133)
T 1y5h_A 82 DSIYYVDANASIQEMLNVMEEHQVRRVPVISE 113 (133)
T ss_dssp TCCCCEETTCCHHHHHHHHHHHTCSEEEEEET
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC
Confidence 99999999999999999999999999999987
No 38
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.72 E-value=2.3e-17 Score=143.90 Aligned_cols=103 Identities=20% Similarity=0.240 Sum_probs=92.1
Q ss_pred cCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCce-eccccCCCCcEEEEEEchhhhcccc-------------
Q 015908 117 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSR-VPVYSGNPTNIIGLILVKNLLSVDY------------- 182 (398)
Q Consensus 117 ~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sr-lPVvd~d~~~IVGIVs~kDLl~~~~------------- 182 (398)
.+...+|+++|++ ++.++++++++. ++++.|.++++++ +||+|++ +++|+|+.+||++...
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 4678899999986 788999999999 9999999999999 9999864 8999999999987521
Q ss_pred ------cccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 183 ------RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 183 ------~~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
....+++++|.+ +++|++++++.++++.|.+++.+.+||+|+
T Consensus 87 ~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 134 (157)
T 1o50_A 87 RSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDE 134 (157)
T ss_dssp --CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcC
Confidence 125689999888 999999999999999999999999999997
No 39
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.72 E-value=1.5e-17 Score=144.70 Aligned_cols=110 Identities=12% Similarity=0.160 Sum_probs=92.5
Q ss_pred HHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccC-CCCcEEEEEEchhhhcccccc-------
Q 015908 113 AGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSG-NPTNIIGLILVKNLLSVDYRD------- 184 (398)
Q Consensus 113 ~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~-d~~~IVGIVs~kDLl~~~~~~------- 184 (398)
.+.+.+...+|+++|++ +++++++++++. ++++.|.+++++++||+|+ +.++++|+|+.+|++......
T Consensus 5 ~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~ 81 (164)
T 2pfi_A 5 GRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPG 81 (164)
T ss_dssp -----CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------C
T ss_pred cccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCc
Confidence 44567788999999996 678899999999 9999999999999999986 248999999999998754221
Q ss_pred -cccchhhhccC------CcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 -AVPLRKMIIRR------IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 -~~~V~eIM~r~------~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..++.++|.++ +.++++++++.++++.|.+++.+.+||+|+
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 129 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSR 129 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEET
T ss_pred ccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEEC
Confidence 25789998776 789999999999999999999999999986
No 40
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.72 E-value=2.3e-17 Score=140.27 Aligned_cols=105 Identities=15% Similarity=0.217 Sum_probs=90.1
Q ss_pred cCccccccc---ccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc-----ccccc
Q 015908 117 ELTEKTAKD---AMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPL 188 (398)
Q Consensus 117 ~L~~~tV~d---IMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~-----~~~~V 188 (398)
++-+.++++ +|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++.... ...++
T Consensus 4 ~~~~~~v~~~~~~~~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v 79 (144)
T 2nyc_A 4 HFLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSV 79 (144)
T ss_dssp GGGGSBGGGSSCCBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC----CCSBH
T ss_pred chhhcchhhcCCCCCC--CceEECCCCcHH-HHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhcccccccCCccH
Confidence 345678888 7874 788899999999 99999999999999999875 899999999999875432 14689
Q ss_pred hhhhcc------CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 189 RKMIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 189 ~eIM~r------~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.++|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 80 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 122 (144)
T 2nyc_A 80 GEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 122 (144)
T ss_dssp HHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECC
Confidence 999876 6889999999999999999999999999997
No 41
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.71 E-value=1.7e-17 Score=147.41 Aligned_cols=106 Identities=19% Similarity=0.240 Sum_probs=92.1
Q ss_pred CcccccccccccCcc--EEEE--eCCCChHHHHHHHHHHcCCceeccc--cCCCCcEEEEEEchhhhcccc---------
Q 015908 118 LTEKTAKDAMTPISK--AFSL--DLDATLTLDTLNAIMTMGHSRVPVY--SGNPTNIIGLILVKNLLSVDY--------- 182 (398)
Q Consensus 118 L~~~tV~dIMtPr~~--VvtV--~~d~tv~~eal~~m~~~~~srlPVv--d~d~~~IVGIVs~kDLl~~~~--------- 182 (398)
+...+|+++|++..+ ++++ ++++++. ++++.|.+++++++||+ |++ ++++|+|+.+|+++...
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~-~~lvGiit~~dl~~~~~~~~~~~~~~ 85 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRES-QRLVGFVLRRDLIISIENARKKQDGV 85 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTT-CBEEEEEEHHHHHHHHHHHHTSCSCC
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCCc
Confidence 367899999998533 6777 9999999 99999999999999999 444 89999999999986532
Q ss_pred -------------------cccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 183 -------------------RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 183 -------------------~~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
....+++++|.+++++|++++++.++++.|.+++.+.+||+|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~ 147 (185)
T 2j9l_A 86 VSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHN 147 (185)
T ss_dssp CTTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred cccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEEC
Confidence 1246799999899999999999999999999999999999985
No 42
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.71 E-value=2.3e-17 Score=144.78 Aligned_cols=103 Identities=19% Similarity=0.236 Sum_probs=92.0
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc------------cccc
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY------------RDAV 186 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~------------~~~~ 186 (398)
...+|+++|++ +++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+||++... ....
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 78 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDAN-KKLLGIVSQRDLLAAQESSLQRSAQGDSLAFET 78 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHHHCC---------CCC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHHhhcccccccchhccc
Confidence 45789999986 678899999999 99999999999999999865 89999999999986532 1256
Q ss_pred cchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 187 PLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 187 ~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
++.++|.+++.+|++++++.++++.|.+++.+.+||+|+
T Consensus 79 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 117 (160)
T 2o16_A 79 PLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK 117 (160)
T ss_dssp BHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET
T ss_pred CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC
Confidence 899999889999999999999999999999999999987
No 43
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.69 E-value=5.3e-17 Score=140.89 Aligned_cols=102 Identities=14% Similarity=0.171 Sum_probs=89.5
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccc-----cccchhhh
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPLRKMI 192 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~-----~~~V~eIM 192 (398)
+.+.+|+++ .++.++++++++. ++++.|.+++++.+||+|++ |+++|+|+.+|+++..... ..++.++|
T Consensus 20 l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m 93 (152)
T 2uv4_A 20 LEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 93 (152)
T ss_dssp HHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGG
T ss_pred HHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhhhhhcchHHHHH
Confidence 466778887 3678899999999 99999999999999999875 8999999999998754321 45789998
Q ss_pred c------cCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 193 I------RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 193 ~------r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
. +++.++++++++.++++.|.+++.+.+||+|+
T Consensus 94 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 132 (152)
T 2uv4_A 94 QHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDE 132 (152)
T ss_dssp GTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECC
Confidence 5 78999999999999999999999999999997
No 44
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.69 E-value=2.6e-17 Score=159.15 Aligned_cols=125 Identities=12% Similarity=0.218 Sum_probs=106.6
Q ss_pred cCCCCCHHHHHHHHHHhcC-cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhh
Q 015908 100 KGGDLTHDETTIIAGALEL-TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL 178 (398)
Q Consensus 100 e~G~L~~eE~~~I~~~l~L-~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl 178 (398)
+.|.++++|+++++++++| .+.+|.|+|+|+.++++++.++|+. +|++.|.+++++++||++++.++++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~ 86 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFI 86 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHH
Confidence 4567888999999999998 9999999999999999999999999 9999999999999999997657999999999998
Q ss_pred cccc------c--------ccccchhh------hccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 179 SVDY------R--------DAVPLRKM------IIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 179 ~~~~------~--------~~~~V~eI------M~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.... . ....++++ |.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 153 (323)
T 3t4n_C 87 NVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQ 153 (323)
T ss_dssp HHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEec
Confidence 6421 0 01233444 3678899999999999999999999999999998
No 45
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.68 E-value=2.1e-17 Score=160.55 Aligned_cols=124 Identities=12% Similarity=0.251 Sum_probs=100.0
Q ss_pred ccCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhh
Q 015908 99 GKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL 178 (398)
Q Consensus 99 ~e~G~L~~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl 178 (398)
.++|.+.+.+++.+.+.| .+.+|+|+|+|+.++++++.++++. ++++.|.+++++++||++++.++++|+|+.+|++
T Consensus 15 ~~~~~~~~~~~~~~~~~l--~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll 91 (330)
T 2v8q_E 15 EHSQETPESNSSVYTTFM--KSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFI 91 (330)
T ss_dssp --------CCSCHHHHHH--HHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHH
T ss_pred hHhhhccchhhHHHHHHH--HcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHH
Confidence 456677777777788874 7889999999999999999999999 9999999999999999997657899999999998
Q ss_pred cccccc------------cc-------cchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 179 SVDYRD------------AV-------PLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 179 ~~~~~~------------~~-------~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
...... .. .++++|.+++++|++++++.++++.|.+++.+.+||+|+
T Consensus 92 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 157 (330)
T 2v8q_E 92 NILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDP 157 (330)
T ss_dssp HHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECT
T ss_pred HHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeC
Confidence 642110 11 234567889999999999999999999999999999986
No 46
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.66 E-value=7e-16 Score=142.44 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=91.1
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccccccchhhhccCCcE
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPR 198 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~~~~ 198 (398)
..-+++++|++ +++++++++|+. +++++|.+++++++||+|++ ++++|+|+.+|++.... ..+++++|.+++.+
T Consensus 11 ~~~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~l~Givt~~dl~~~~~--~~~v~~im~~~~~~ 84 (213)
T 1vr9_A 11 HHMKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDRE-GHFRGVVNKEDLLDLDL--DSSVFNKVSLPDFF 84 (213)
T ss_dssp --CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECTT-SBEEEEEEGGGGTTSCT--TSBSGGGCBCTTCC
T ss_pred cccCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CEEEEEEEHHHHHhhcC--CCcHHHHccCCCEE
Confidence 34578999985 778899999999 99999999999999999865 89999999999987754 35899999999999
Q ss_pred EcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 199 VSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 199 V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+++++++.++++.|.+++.+.+||+|+
T Consensus 85 v~~~~~l~~a~~~m~~~~~~~lpVvd~ 111 (213)
T 1vr9_A 85 VHEEDNITHALLLFLEHQEPYLPVVDE 111 (213)
T ss_dssp EETTSBHHHHHHHHHHCCCSEEEEECT
T ss_pred ECCCCcHHHHHHHHHHhCCCEEEEEcC
Confidence 999999999999999999999999987
No 47
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.66 E-value=3.2e-16 Score=149.64 Aligned_cols=130 Identities=15% Similarity=0.208 Sum_probs=107.9
Q ss_pred cccHHHHHHHHHhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceecc
Q 015908 81 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPV 160 (398)
Q Consensus 81 ~~s~eEL~~Lv~l~~~e~~e~G~L~~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPV 160 (398)
.+|..||...+.. +... .+...+.+.+.+.+|+++|++ +++++.+++++. ++++.|.+++++++||
T Consensus 64 ivT~~Di~~~~~~----~~~~-------~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpV 129 (296)
T 3ddj_A 64 LLTTRDLLSTVES----YCKD-------SCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLPV 129 (296)
T ss_dssp EEEHHHHHGGGTT----CC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEEE
T ss_pred EEeHHHHHHHhcc----cccc-------cccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEEE
Confidence 4677787766531 1100 344556666778899999997 678899999999 9999999999999999
Q ss_pred ccCCCCcEEEEEEchhhhcccccc--cccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 161 YSGNPTNIIGLILVKNLLSVDYRD--AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 161 vd~d~~~IVGIVs~kDLl~~~~~~--~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+|++ ++++|+++.+|++...... ..+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 130 vd~~-~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 195 (296)
T 3ddj_A 130 VDIN-DKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDD 195 (296)
T ss_dssp ECTT-SCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred EcCC-CcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 9875 8999999999998764332 45899999999999999999999999999999999999997
No 48
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.65 E-value=1.9e-16 Score=148.87 Aligned_cols=134 Identities=12% Similarity=0.205 Sum_probs=104.7
Q ss_pred cccHHHHHHHHHhhccccccCCCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceecc
Q 015908 81 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPV 160 (398)
Q Consensus 81 ~~s~eEL~~Lv~l~~~e~~e~G~L~~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPV 160 (398)
.+|.+||..++.. +...+.+.. ....+++...+.+|+++|++ +++++++++++. ++++.|.+++++++||
T Consensus 51 ivt~~di~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~V 120 (280)
T 3kh5_A 51 IITSMDIVDFMGG----GSKYNLIRE---KHERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAPI 120 (280)
T ss_dssp EEEHHHHHHHTTT----SGGGHHHHT---TSTTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEEE
T ss_pred EEEHHHHHHHhcc----cchhhhhhh---ccccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEEE
Confidence 5688888877642 111111111 11122233346799999996 678999999999 9999999999999999
Q ss_pred ccCCCCcEEEEEEchhhhcccccc---cccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 161 YSGNPTNIIGLILVKNLLSVDYRD---AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 161 vd~d~~~IVGIVs~kDLl~~~~~~---~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+|++ ++++|+++.+|+++..... ..+++++|.+++.++++++++.++++.|.+++.+.+||+++
T Consensus 121 vd~~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~~ 187 (280)
T 3kh5_A 121 VNDE-NQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVVSE 187 (280)
T ss_dssp ECTT-CBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred EcCC-CEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 9876 8999999999998764332 34799999999999999999999999999999999999943
No 49
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.64 E-value=6.2e-16 Score=149.49 Aligned_cols=105 Identities=15% Similarity=0.229 Sum_probs=93.1
Q ss_pred cCcccccccc---cccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccc-----cccc
Q 015908 117 ELTEKTAKDA---MTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPL 188 (398)
Q Consensus 117 ~L~~~tV~dI---MtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~-----~~~V 188 (398)
.+.+.+|+++ |++ +++++++++++. ++++.|.+++++++||+|++ |+++|+|+.+|+++....+ ..++
T Consensus 183 ~~~~~~v~~~~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v 258 (323)
T 3t4n_C 183 HFLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSV 258 (323)
T ss_dssp GGCCSBGGGTTCSBCT--TCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETTHHHHHHHTTHHHHTTSBH
T ss_pred hhhhCcHHHcCCCCCC--CcEEECCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHHHHHHhhchhhhccCCH
Confidence 3556789999 764 778999999999 99999999999999999876 8999999999998764332 4589
Q ss_pred hhhhcc------CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 189 RKMIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 189 ~eIM~r------~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+++|.+ +++++++++++.++++.|.+++.+.+||+|+
T Consensus 259 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 301 (323)
T 3t4n_C 259 GEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 301 (323)
T ss_dssp HHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECT
T ss_pred HHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECC
Confidence 999987 7899999999999999999999999999997
No 50
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.63 E-value=8.3e-17 Score=171.92 Aligned_cols=105 Identities=17% Similarity=0.053 Sum_probs=91.8
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHH-HcCCceeccccCCCCcEEEEEEchhhhcccccc-------------
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIM-TMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD------------- 184 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~-~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~------------- 184 (398)
.+++|+|+|+|++++.++++++++. ++.+.|. +++++++||+|++ ++++|+|+.+|+++.....
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~~-~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDAN-GYLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCTT-CBBCCEESHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEecC-CeEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 6789999999988999999999999 9999999 7999999999975 8999999999998753211
Q ss_pred --------------------------------------cccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 --------------------------------------AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 --------------------------------------~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..+++++|.+++.+|++++++.++++.|++++.+++||+|+
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve~ 607 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTER 607 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEET
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEEC
Confidence 00277899999999999999999999999999999999943
No 51
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.63 E-value=1e-15 Score=158.45 Aligned_cols=131 Identities=9% Similarity=0.166 Sum_probs=111.1
Q ss_pred cccHHHHHHHHHhhccccccCCCCC-----HHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCC
Q 015908 81 LLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 155 (398)
Q Consensus 81 ~~s~eEL~~Lv~l~~~e~~e~G~L~-----~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~ 155 (398)
.++++||..++... +..|.|. +++++++++++.+ +++|++ +++++++++++. ++++.|.++++
T Consensus 54 ~vt~~eLa~av~~~----Gg~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIARA----GGLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHHc----CCceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 46788999888742 2233344 6778888888754 789996 788899999999 99999999999
Q ss_pred ceecccc--CCCCcEEEEEEchhhhcccccccccchhhhcc-CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 156 SRVPVYS--GNPTNIIGLILVKNLLSVDYRDAVPLRKMIIR-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 156 srlPVvd--~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r-~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+++||++ ++ ++++|+|+.+||+... ....+++++|.+ ++++|++++++.++++.|.+++.+.+||||+
T Consensus 122 ~~~pVvd~~~~-~~lvGivt~~Dl~~~~-~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~ 192 (491)
T 1zfj_A 122 SGVPIVETLAN-RKLVGIITNRDMRFIS-DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDN 192 (491)
T ss_dssp SEEEEESCTTT-CBEEEEEEHHHHHHCS-CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECT
T ss_pred CEEEEEEeCCC-CEEEEEEEHHHHhhhc-cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 9999998 54 8999999999998653 235689999987 8999999999999999999999999999998
No 52
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.62 E-value=9.1e-16 Score=146.53 Aligned_cols=104 Identities=13% Similarity=0.203 Sum_probs=93.2
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc----------cccc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----------DAVP 187 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~----------~~~~ 187 (398)
....+|+++|++ ++.++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|++..... ...+
T Consensus 153 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 228 (296)
T 3ddj_A 153 DEIFPVKVFMST--KVQTIYKEVRLD-QAVKLMLRRGFRRLPVIDDD-NKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKV 228 (296)
T ss_dssp CCCCBHHHHSBC--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCB
T ss_pred cccccHHHhhcC--CCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHHHhhcChhhhcCcC
Confidence 456789999985 678899999999 99999999999999999865 899999999999876431 2468
Q ss_pred chhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 188 LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 188 V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+.++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 229 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~ 266 (296)
T 3ddj_A 229 VKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNK 266 (296)
T ss_dssp HHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 99999999999999999999999999999999999997
No 53
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.61 E-value=2e-15 Score=157.70 Aligned_cols=131 Identities=11% Similarity=0.188 Sum_probs=107.4
Q ss_pred cccHHHHHHHHHhhccccccCCCC----C-HHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCC
Q 015908 81 LLRRAELKTFVNFHGNEAGKGGDL----T-HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 155 (398)
Q Consensus 81 ~~s~eEL~~Lv~l~~~e~~e~G~L----~-~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~ 155 (398)
.+|++++...+...+ .-|.| + +++.+++..++. ++++|++ +++++++++|+. +++++|.++++
T Consensus 77 tvTe~~lAia~a~~G----giGvIh~~~~~~~q~~~V~~V~~-----~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~~ 144 (511)
T 3usb_A 77 TVTEADMAIAMARQG----GLGIIHKNMSIEQQAEQVDKVKR-----SESGVIS--DPFFLTPEHQVY-DAEHLMGKYRI 144 (511)
T ss_dssp TTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHHHT-----SSSCSSS--SCCCBCTTSBHH-HHHHHHHHHCC
T ss_pred hhcHHHHHHHHHhcC----CceeecccCCHHHHHHHHHHhhc-----ccccccc--CCEEECCCCCHH-HHHHHHHHcCC
Confidence 467888877775322 12223 2 455667888764 5577875 678899999999 99999999999
Q ss_pred ceeccccC--CCCcEEEEEEchhhhcccccccccchhhhcc-CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 156 SRVPVYSG--NPTNIIGLILVKNLLSVDYRDAVPLRKMIIR-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 156 srlPVvd~--d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r-~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+++||+++ + ++++|+|+.+||+.. .....+|+++|.+ ++++|++++++.++++.|.+++.+.+||||+
T Consensus 145 s~~pVvd~g~~-~~lvGiVt~rDl~~~-~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe 215 (511)
T 3usb_A 145 SGVPVVNNLDE-RKLVGIITNRDMRFI-QDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDN 215 (511)
T ss_dssp SEEEEESCTTT-CBEEEEEEHHHHTTC-CCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECT
T ss_pred cEEEEEecCCC-CEEEEEEEehHhhhh-ccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeC
Confidence 99999986 5 899999999999863 2335789999987 8999999999999999999999999999998
No 54
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.61 E-value=3.3e-15 Score=140.36 Aligned_cols=101 Identities=15% Similarity=0.245 Sum_probs=87.8
Q ss_pred cccc-ccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccc----------------
Q 015908 122 TAKD-AMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD---------------- 184 (398)
Q Consensus 122 tV~d-IMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~---------------- 184 (398)
++++ +|++ +++++++++|+. +|++.|.+++++++||++++.++++|+++.+|++......
T Consensus 4 ~v~~~i~~~--~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T 3kh5_A 4 RVMKIAQNK--KIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLA 80 (280)
T ss_dssp BGGGTSCCS--CCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHH
T ss_pred hHHHHhcCC--CcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhH
Confidence 4455 4554 789999999999 9999999999999999986448999999999998754211
Q ss_pred --cccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 --AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 --~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 123 (280)
T 3kh5_A 81 AINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVND 123 (280)
T ss_dssp HTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECT
T ss_pred HhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcC
Confidence 34799999999999999999999999999999999999987
No 55
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.61 E-value=1e-15 Score=143.29 Aligned_cols=102 Identities=17% Similarity=0.243 Sum_probs=90.0
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc----------------
Q 015908 120 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------------- 183 (398)
Q Consensus 120 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~---------------- 183 (398)
..+|+|+|++ ++.++++++++. +|++.|.+++++++||+|++ |+++|+|+.+|+++....
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDSNILAKSATSLDN 81 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHH
Confidence 4689999985 678899999999 99999999999999999876 899999999999764210
Q ss_pred --------------------------------------------------------------------------------
Q 015908 184 -------------------------------------------------------------------------------- 183 (398)
Q Consensus 184 -------------------------------------------------------------------------------- 183 (398)
T Consensus 82 v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 82 ILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence
Q ss_pred ---------------------ccccchhhhc-cCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 184 ---------------------DAVPLRKMII-RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 184 ---------------------~~~~V~eIM~-r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
...+++++|. +++.++++++++.++++.|.+++.+.+||+|+
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~ 225 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDE 225 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECT
T ss_pred HcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcC
Confidence 0235789998 89999999999999999999999999999998
No 56
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.59 E-value=1.6e-15 Score=158.55 Aligned_cols=103 Identities=13% Similarity=0.172 Sum_probs=89.5
Q ss_pred CcccccccccccCccEEEEeCC-CChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc----ccccchhhh
Q 015908 118 LTEKTAKDAMTPISKAFSLDLD-ATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMI 192 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d-~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~----~~~~V~eIM 192 (398)
+.+.+|+++|++ +++++.++ +|+. +++++|.+++++++||+|++.++++|+|+.+||++.... ...+|+++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im 457 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL 457 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh
Confidence 457899999995 67889999 9999 999999999999999998323899999999999865322 256899999
Q ss_pred ccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 193 IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 193 ~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.+++++|++++++.++++.|.+++ ++||||+
T Consensus 458 ~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~ 488 (527)
T 3pc3_A 458 NKRVIRLNESEILGKLARVLEVDP--SVLILGK 488 (527)
T ss_dssp ETTCCEEETTSBHHHHHHHHTTCS--EEEEEEE
T ss_pred cCCCeEECCCCcHHHHHHHHhhCC--EEEEEeC
Confidence 999999999999999999997765 4799988
No 57
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.59 E-value=2.7e-15 Score=143.23 Aligned_cols=60 Identities=15% Similarity=0.132 Sum_probs=53.5
Q ss_pred cCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCC-CCcEEEEEEchhhhc
Q 015908 117 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN-PTNIIGLILVKNLLS 179 (398)
Q Consensus 117 ~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d-~~~IVGIVs~kDLl~ 179 (398)
...+++|+|+|++ +++++.+++++. ++.++|.+++++++||++++ .++++|+|+.+||+.
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~ 69 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEG 69 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHH
Confidence 3467899999996 789999999999 99999999999999999864 267999999999975
No 58
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.59 E-value=2.3e-16 Score=164.21 Aligned_cols=132 Identities=15% Similarity=0.246 Sum_probs=102.5
Q ss_pred ccccHHHHHHHHHhhccccccCCCC-----CHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcC
Q 015908 80 VLLRRAELKTFVNFHGNEAGKGGDL-----THDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMG 154 (398)
Q Consensus 80 ~~~s~eEL~~Lv~l~~~e~~e~G~L-----~~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~ 154 (398)
..+|++++...+... +.-|.| .++++++++++ ++++++|++ +++++++++|+. +++++|.+++
T Consensus 52 dtVTe~~ma~a~a~~----GGiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~~--d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQE----GGIGFIHKNMSIEQQAAQVHQV-----KIFEAGVVT--HPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHHH----TCEEEECSSSCHHHHHHHHHHH-----HHCCC--CB--CCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHHc----CCcceecCCCCHHHHHHHHHhc-----ccccccccc--CceEECCCCCHH-HHHHHHHHcC
Confidence 357889998888642 223334 56778899988 466889984 788999999999 9999999999
Q ss_pred CceeccccCCCCcEEEEEEchhhhcccccccccchhhhc-c-CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 155 HSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMII-R-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 155 ~srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~-r-~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
++++||++++ ++++|+|+.+||+... ....+|+++|. + +++++++++++.++++.|++++.+.+||||+
T Consensus 120 ~s~~PVvd~~-~~lvGiVt~rDL~~~~-~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe 190 (496)
T 4fxs_A 120 FAGFPVVTEN-NELVGIITGRDVRFVT-DLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVND 190 (496)
T ss_dssp CCEEEEECSS-SBEEEEEEHHHHTTCC-CTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECT
T ss_pred CcEEEEEccC-CEEEEEEEHHHHhhcc-cCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 9999999976 8999999999997543 33568999987 4 5899999999999999999999999999998
No 59
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.58 E-value=4.1e-15 Score=140.37 Aligned_cols=103 Identities=14% Similarity=0.169 Sum_probs=90.3
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhh------cccc----------
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL------SVDY---------- 182 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl------~~~~---------- 182 (398)
.+.+++++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++ +...
T Consensus 124 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~ 199 (282)
T 2yzq_A 124 KGVEIEPYYQR--YVSIVWEGTPLK-AALKALLLSNSMALPVVDSE-GNLVGIVDETDLLRDSEIVRIMKSTELAASSEE 199 (282)
T ss_dssp GGCBSTTTSBS--CCCCEETTSBHH-HHHHHHHTCSSSEEEEECTT-SCEEEEEEGGGGGGCGGGCC-------------
T ss_pred ccCcHHHHhCC--CCEEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHhhhhhhhhhhccchhhhhhhh
Confidence 46789999974 677899999999 99999999999999999865 7999999999998 4331
Q ss_pred ------------------cccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 183 ------------------RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 183 ------------------~~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
....+++++|.+++.++.+++++.+|++.|.+++.+.+||+|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 260 (282)
T 2yzq_A 200 EWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRG 260 (282)
T ss_dssp -------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred hhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECC
Confidence 0146799999999999999999999999999999999999997
No 60
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.57 E-value=3.5e-15 Score=140.85 Aligned_cols=99 Identities=22% Similarity=0.250 Sum_probs=71.7
Q ss_pred cccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccccccchhhhccCCcEEc
Q 015908 121 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVS 200 (398)
Q Consensus 121 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~~~~V~ 200 (398)
++|+++|++ +++++++++++. ++++.|.+++++++||++++ |+++|+++.+|++.... ..+++++|.+++.+++
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~--~~~v~~~m~~~~~~v~ 74 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPD--EEQLAMLVKRDVPVVK 74 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC-------------CCEEEEECTT-CCEEEEEESSCC------------CCCBSCCCEEE
T ss_pred CchHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhc--cCCHHHHcCCCCcEEC
Confidence 478999995 678899999999 99999999999999999864 89999999999987654 3579999888899999
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 201 EDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 201 ~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+++++.++++.|.+++.+.+||+|+
T Consensus 75 ~~~~l~~a~~~m~~~~~~~~~Vvd~ 99 (282)
T 2yzq_A 75 ENDTLKKAAKLMLEYDYRRVVVVDS 99 (282)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 9999999999999999999999997
No 61
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.54 E-value=2.3e-14 Score=139.07 Aligned_cols=103 Identities=8% Similarity=0.166 Sum_probs=90.3
Q ss_pred ccccccc---ccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc-----ccccchh
Q 015908 119 TEKTAKD---AMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRK 190 (398)
Q Consensus 119 ~~~tV~d---IMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~-----~~~~V~e 190 (398)
...++++ +|++ ++.++++++++. ++++.|.+++++++||++++ |+++|+|+.+|+++.... ...++.+
T Consensus 180 ~~~~v~~l~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v~~ 255 (334)
T 2qrd_G 180 LRVPLNQMTIGTWS--NLATASMETKVY-DVIKMLAEKNISAVPIVNSE-GTLLNVYESVDVMHLIQDGDYSNLDLSVGE 255 (334)
T ss_dssp CCCBGGGSSCSBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETHHHHHHHTTSCGGGGGSBHHH
T ss_pred hhCcHHHhCCcccC--CceEECCCCcHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEHHHHHHHhhccccccccCcHHH
Confidence 4578899 4874 678899999999 99999999999999999875 899999999999875432 1467899
Q ss_pred hhcc------CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 191 MIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 191 IM~r------~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 256 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 296 (334)
T 2qrd_G 256 ALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDE 296 (334)
T ss_dssp HHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECT
T ss_pred HHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 9874 8899999999999999999999999999997
No 62
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.54 E-value=1e-15 Score=159.50 Aligned_cols=136 Identities=12% Similarity=0.111 Sum_probs=20.0
Q ss_pred cccHHHHHHHHHhhccccccCCCCC-HHHHHHHHHHhcCcccccccc-cccCccEEEEeCCCChHHHHHHHHHHcCCcee
Q 015908 81 LLRRAELKTFVNFHGNEAGKGGDLT-HDETTIIAGALELTEKTAKDA-MTPISKAFSLDLDATLTLDTLNAIMTMGHSRV 158 (398)
Q Consensus 81 ~~s~eEL~~Lv~l~~~e~~e~G~L~-~eE~~~I~~~l~L~~~tV~dI-MtPr~~VvtV~~d~tv~~eal~~m~~~~~srl 158 (398)
.++++++...+...+..+-=...++ +++++++.++.. .++ |++ +++++++++|+. +++++|.+++++++
T Consensus 61 ~vt~~~la~~la~~gg~G~I~~~~~~e~~~~~v~~V~~------~e~gM~~--~~~~v~~~~tv~-eal~~m~~~~~s~~ 131 (503)
T 1me8_A 61 SVSGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKN------FKAGFVV--SDSNVKPDQTFA-DVLAISQRTTHNTV 131 (503)
T ss_dssp TTCSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHT------TTC---------------------------------
T ss_pred hhhHHHHHHHHHhCCCcceeeCCCCHHHHHHHHhhhhh------cccCccc--CCeEECCCCcHH-HHHHHHHHcCceEE
Confidence 4577888877763211000001123 466777776654 355 986 788999999999 99999999999999
Q ss_pred ccccCC--CCcEEEEEEchhhhcccccccccchhhhccC--CcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 159 PVYSGN--PTNIIGLILVKNLLSVDYRDAVPLRKMIIRR--IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 159 PVvd~d--~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~--~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
||+|++ .++++|+|+.+||+........+|+++|.++ +++|++++++.++++.|.+++.+.+||||+
T Consensus 132 pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe 202 (503)
T 1me8_A 132 AVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD 202 (503)
T ss_dssp -----------------------------------------------------------------------
T ss_pred EEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 999864 3799999999999864222356899998876 999999999999999999999999999998
No 63
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.51 E-value=1.5e-15 Score=157.91 Aligned_cols=130 Identities=13% Similarity=0.244 Sum_probs=22.8
Q ss_pred cccHHHHHHHHHhhccccccCCCCC-----HHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCC
Q 015908 81 LLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 155 (398)
Q Consensus 81 ~~s~eEL~~Lv~l~~~e~~e~G~L~-----~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~ 155 (398)
.+|++++...+...+ .-|.|. +++++++.++ ++++++|++ +++++++++|+. +++++|.++++
T Consensus 52 tVTe~~lA~ala~~G----GiGvI~~~~~~e~~a~~v~~v-----k~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~~ 119 (490)
T 4avf_A 52 TVTEARLAIAMAQEG----GIGIIHKNMGIEQQAAEVRKV-----KKHETAIVR--DPVTVTPSTKII-ELLQMAREYGF 119 (490)
T ss_dssp TTCSHHHHHHHHHHT----SEEEECCSSCHHHHHHHHHHH-----HHCCC------------------------------
T ss_pred hhCHHHHHHHHHHcC----CCccccCCCCHHHHHHHhhhh-----cccccCccc--CceEeCCCCcHH-HHHHHHHHhCC
Confidence 467899988776432 223333 5667777777 457889985 778999999999 99999999999
Q ss_pred ceeccccCCCCcEEEEEEchhhhcccccccccchhhhc-c-CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 156 SRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMII-R-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 156 srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~-r-~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+++||++ + ++++|+|+.+||.... ....+|+++|. + +++++++++++.++++.|.+++.+.+||||+
T Consensus 120 s~~pVvd-~-g~lvGIVt~rDl~~~~-~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe 188 (490)
T 4avf_A 120 SGFPVVE-Q-GELVGIVTGRDLRVKP-NAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDE 188 (490)
T ss_dssp ------------------------------------------------------------------------
T ss_pred CEEEEEE-C-CEEEEEEEhHHhhhcc-ccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 9999999 4 8999999999996432 33568999987 4 6999999999999999999999999999998
No 64
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.51 E-value=2.3e-15 Score=156.02 Aligned_cols=128 Identities=13% Similarity=0.233 Sum_probs=22.9
Q ss_pred cccHHHHHHHHHhhccccccCCCCC-----HHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCC
Q 015908 81 LLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 155 (398)
Q Consensus 81 ~~s~eEL~~Lv~l~~~e~~e~G~L~-----~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~ 155 (398)
.++..|+...+... +..|.+. +++++++.+++++. ++|+. +++++++++++. ++++.|.++++
T Consensus 57 ~vt~~ela~ava~~----GglG~i~~~~~~e~~~~~I~~v~~~~-----~~m~~--~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMARE----GGLGVIHRNMGIEEQVEQVKRVKRAE-----RLIVE--DVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHhc----CCceeecCCCCHHHHHHHHHhhcchh-----hcccc--CceEECCCCCHH-HHHHHHHHcCC
Confidence 45778888777632 2223343 57789999998764 47874 789999999999 99999999999
Q ss_pred ceeccccCCCCcEEEEEEchhhhcccccccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 156 SRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 156 srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+++||+++ ++++|+|+.+||+. ....+++++|.++++++++++++.++++.|++++.+.+||||+
T Consensus 125 ~~~pVvd~--~~lvGivt~~Dl~~---~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde 189 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITKKDIAA---REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDE 189 (486)
T ss_dssp ----------------------------------------------------------------------
T ss_pred cEEEEEEC--CEEEEEEEHHHhcc---CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEec
Confidence 99999986 89999999999986 3356899999889999999999999999999999999999998
No 65
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.50 E-value=9e-14 Score=134.84 Aligned_cols=103 Identities=14% Similarity=0.189 Sum_probs=88.5
Q ss_pred ccccccc--cccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccc-----cccchhhh
Q 015908 120 EKTAKDA--MTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPLRKMI 192 (398)
Q Consensus 120 ~~tV~dI--MtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~-----~~~V~eIM 192 (398)
..+++++ |+ ..+++++++++++. ++++.|.+++++++||++++ |+++|+|+.+|+++..... ..++.++|
T Consensus 189 ~~~v~~~~v~~-~~~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~ 265 (330)
T 2v8q_E 189 SKSLEELQIGT-YANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 265 (330)
T ss_dssp GSBHHHHTCSB-CSSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHG
T ss_pred cCCHHHhcccC-cCCceEECCCCCHH-HHHHHHHHcCCCeEEEECCC-CcEEEEEEHHHHHHHHhccccccccCcHHHHH
Confidence 3456666 54 14678899999999 99999999999999999865 8999999999999875432 45788887
Q ss_pred ------ccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 193 ------IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 193 ------~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 266 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~ 304 (330)
T 2v8q_E 266 QHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDE 304 (330)
T ss_dssp GGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcC
Confidence 478999999999999999999999999999997
No 66
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.37 E-value=7.9e-14 Score=144.51 Aligned_cols=112 Identities=10% Similarity=0.193 Sum_probs=7.8
Q ss_pred CCHH-HHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc
Q 015908 104 LTHD-ETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 182 (398)
Q Consensus 104 L~~e-E~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~ 182 (398)
++.+ .++.+..++ +++++|++ +++++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|+++..
T Consensus 82 ~~~e~~~~~v~~v~-----~~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~~- 151 (494)
T 1vrd_A 82 LTPDEQARQVSIVK-----KTENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFEK- 151 (494)
T ss_dssp SCHHHHHHHHHHHH-----TC-----------------------------------------------------------
T ss_pred CChHHHHHHHHhhh-----hHhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhhc-
Confidence 4443 345566664 46789986 788999999999 99999999999999999875 8999999999998642
Q ss_pred cccccchhhhcc--CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 183 RDAVPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 183 ~~~~~V~eIM~r--~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
....+++++|.+ ++.+|++++++.++++.|.+++.+.+||||+
T Consensus 152 ~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~ 196 (494)
T 1vrd_A 152 NLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSK 196 (494)
T ss_dssp ---------------------------------------------
T ss_pred CCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC
Confidence 235689999987 8999999999999999999999999999998
No 67
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.23 E-value=1.4e-12 Score=135.38 Aligned_cols=110 Identities=12% Similarity=0.253 Sum_probs=9.6
Q ss_pred HHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCC--CCcEEEEEEchhhhccccc
Q 015908 106 HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN--PTNIIGLILVKNLLSVDYR 183 (398)
Q Consensus 106 ~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d--~~~IVGIVs~kDLl~~~~~ 183 (398)
+++.++++.+-.+.. .|+. +.+++.++.|+. +++++|.+++++.+||+++. .++++|||+.||+... +
T Consensus 128 e~Qa~~V~~VKr~e~-----g~i~--dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d 197 (556)
T 4af0_A 128 EEQAAMVRRVKKYEN-----GFIT--DPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--D 197 (556)
T ss_dssp HHHHHHHHHHHHCCC-----------------------------------------------------------------
T ss_pred HHHHHHHHHHHhccc-----CccC--CCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--c
Confidence 345677887765543 4552 678999999999 99999999999999999852 3789999999998764 3
Q ss_pred ccccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 184 DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 184 ~~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
...+|+++|+.++++++++.++.++.+.|.+++...+||||+
T Consensus 198 ~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~ 239 (556)
T 4af0_A 198 AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDS 239 (556)
T ss_dssp ------------------------------------------
T ss_pred cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEcc
Confidence 356899999999999999999999999999999999999998
No 68
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.23 E-value=2.6e-13 Score=141.47 Aligned_cols=102 Identities=14% Similarity=0.230 Sum_probs=59.4
Q ss_pred ccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCC--CCcEEEEEEchhhhcccc-cccccchhhhcc--CC
Q 015908 122 TAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN--PTNIIGLILVKNLLSVDY-RDAVPLRKMIIR--RI 196 (398)
Q Consensus 122 tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d--~~~IVGIVs~kDLl~~~~-~~~~~V~eIM~r--~~ 196 (398)
+++++|++ +++++++++++. +++++|.+++++.+||+|++ .++++|+|+.+|+..... ....+++++|.+ ++
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~~ 185 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIEL 185 (514)
T ss_dssp TCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC----------------CCBCC
T ss_pred hhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCCC
Confidence 68899985 577899999999 99999999999999999863 379999999999986531 234689999987 89
Q ss_pred cEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q 015908 197 PRVSEDMPLYDILNEFQKGHSHIAVVYKDL 226 (398)
Q Consensus 197 ~~V~~d~~l~daL~~m~~~~~~~apVVDe~ 226 (398)
+++++++++.++++.|.+++.+.+||||+.
T Consensus 186 ~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~ 215 (514)
T 1jcn_A 186 VVAPAGVTLKEANEILQRSKKGKLPIVNDC 215 (514)
T ss_dssp CCEETTCCSTTTTTHHHHHTCSCCCEESSS
T ss_pred eEECCCCCHHHHHHHHHHcCCCcccEECCC
Confidence 999999999999999999999999999973
No 69
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.91 E-value=1.3e-09 Score=83.90 Aligned_cols=65 Identities=14% Similarity=0.285 Sum_probs=55.3
Q ss_pred cEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc-c----ccccchhhhccCCcEE
Q 015908 132 KAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY-R----DAVPLRKMIIRRIPRV 199 (398)
Q Consensus 132 ~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~-~----~~~~V~eIM~r~~~~V 199 (398)
+++++++++|+. +|+++|.+++++++||+++ ++++|+++.+|+++... . ...+++++|++++.+|
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 367899999999 9999999999999999985 79999999999975421 1 2468999999998764
No 70
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.64 E-value=3.2e-08 Score=74.08 Aligned_cols=64 Identities=13% Similarity=0.256 Sum_probs=54.6
Q ss_pred EEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc-----ccccchhhhccCCcEE
Q 015908 133 AFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRKMIIRRIPRV 199 (398)
Q Consensus 133 VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~-----~~~~V~eIM~r~~~~V 199 (398)
++++++++++. ++++.|.+++++++||+++ ++++|+|+.+|+++.... ...+++++|.+++.+|
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v 70 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeEC
Confidence 57899999999 9999999999999999986 899999999999876322 2568999998877653
No 71
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.61 E-value=2e-08 Score=92.23 Aligned_cols=102 Identities=12% Similarity=0.149 Sum_probs=53.8
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccccccchhhhccCCc-E
Q 015908 120 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP-R 198 (398)
Q Consensus 120 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~~~-~ 198 (398)
+.+|+++|++ +++++++++++. ++++.|.+++++++||+|++ |+++|+|+.+|+++..... ..+.+.|.+-.+ +
T Consensus 71 ~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~Dil~~~~~~-~~~~~~~~~l~~~~ 145 (213)
T 1vr9_A 71 DSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQEPYLPVVDEE-MRLKGAVSLHDFLEALIEA-LAMDVPGIRFSVLL 145 (213)
T ss_dssp TSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCCCSEEEEECTT-CBEEEEEEHHHHHHHHHHS-CC------------
T ss_pred CCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHH-hcCCCCcEEEEEEe
Confidence 4579999996 677899999999 99999999999999999875 8999999999998765332 122333322111 1
Q ss_pred EcCCCCHHHHHHHHHhCCCcEEEEEecC
Q 015908 199 VSEDMPLYDILNEFQKGHSHIAVVYKDL 226 (398)
Q Consensus 199 V~~d~~l~daL~~m~~~~~~~apVVDe~ 226 (398)
.....++.++++.|.+++.+.++|++.+
T Consensus 146 ~~~~~~l~~~~~~l~~~~~~~l~V~~~~ 173 (213)
T 1vr9_A 146 EDKPGELRKVVDALALSNINILSVITTR 173 (213)
T ss_dssp ----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEEEEe
Confidence 2344569999999999999999998763
No 72
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.43 E-value=1.2e-07 Score=83.40 Aligned_cols=41 Identities=22% Similarity=0.299 Sum_probs=39.2
Q ss_pred cccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 ~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+.+|+++|.+++++|++++++.+|++.|.+++.+.+||+|+
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~ 57 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ 57 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECT
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcC
Confidence 46899999999999999999999999999999999999998
No 73
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.26 E-value=1.5e-06 Score=66.64 Aligned_cols=30 Identities=13% Similarity=0.092 Sum_probs=28.4
Q ss_pred CcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 196 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 196 ~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+++|.+++++.+|++.|.+++++.+||+|+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~ 31 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG 31 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 578999999999999999999999999986
No 74
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.25 E-value=1.7e-06 Score=80.38 Aligned_cols=41 Identities=10% Similarity=0.141 Sum_probs=38.8
Q ss_pred cccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 ~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..+|+++|.+++.++++++++.+|++.|.+++.+.+||+|+
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~ 46 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADG 46 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECT
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 35799999999999999999999999999999999999997
No 75
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.21 E-value=1.5e-06 Score=71.17 Aligned_cols=60 Identities=17% Similarity=0.249 Sum_probs=53.1
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 182 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~ 182 (398)
...+++++|.+ ++.++++++++. ++++.|.+++.+++||++++ |+++|+|+.+|+++...
T Consensus 60 ~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 60 NKKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYNISGVPVVDDY-RRVVGIVTSEDISRLFG 119 (122)
T ss_dssp TCCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHC
T ss_pred cccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCeEEEECCC-CCEEEEEeHHHHHHHhh
Confidence 34589999986 677899999999 99999999999999999876 89999999999987643
No 76
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.20 E-value=3.4e-06 Score=71.88 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=38.4
Q ss_pred cccchhhhcc--CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 AVPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 ~~~V~eIM~r--~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..+++++|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 22 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~ 64 (148)
T 3lv9_A 22 EKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRK 64 (148)
T ss_dssp TCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESS
T ss_pred CCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC
Confidence 4589999987 8999999999999999999999999999987
No 77
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.17 E-value=1e-06 Score=75.74 Aligned_cols=61 Identities=16% Similarity=0.268 Sum_probs=54.4
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 183 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~ 183 (398)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||+| + |+++|+|+.+|+++....
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHT
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHH
Confidence 357899999986 678899999999 999999999999999998 4 899999999999987543
No 78
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.14 E-value=1.6e-06 Score=75.12 Aligned_cols=63 Identities=17% Similarity=0.221 Sum_probs=56.1
Q ss_pred cCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCC---cEEEEEEchhhhccc
Q 015908 117 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPT---NIIGLILVKNLLSVD 181 (398)
Q Consensus 117 ~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~---~IVGIVs~kDLl~~~ 181 (398)
...+.+|+++|+++.+++++++++++. ++++.|.+++++++||++++ | +++|+|+.+|+++..
T Consensus 77 ~~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~~~vGiit~~dil~~l 142 (159)
T 3fv6_A 77 ELTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQIDALPVIKDT-DKGFEVIGRVTKTNMTKIL 142 (159)
T ss_dssp CTTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCSEEEEEEEC-SSSEEEEEEEEHHHHHHHH
T ss_pred cccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CcceeEEEEEEHHHHHHHH
Confidence 346789999999766788999999999 99999999999999999875 6 899999999998764
No 79
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.13 E-value=4.2e-06 Score=70.06 Aligned_cols=40 Identities=13% Similarity=0.185 Sum_probs=37.8
Q ss_pred ccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 186 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 186 ~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.+++++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 46 (138)
T 2yzi_A 7 APIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIND 46 (138)
T ss_dssp SBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 4789999999999999999999999999999999999986
No 80
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.13 E-value=4.8e-06 Score=71.09 Aligned_cols=40 Identities=20% Similarity=0.351 Sum_probs=37.7
Q ss_pred ccchhhhcc--CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 186 VPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 186 ~~V~eIM~r--~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.+++++|.+ +++++++++++.++++.|.+++.+.+||+|+
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~ 69 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD 69 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC
Confidence 479999988 8999999999999999999999999999997
No 81
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.13 E-value=5.1e-06 Score=61.83 Aligned_cols=31 Identities=13% Similarity=0.118 Sum_probs=28.7
Q ss_pred CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 195 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 195 ~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
++.++++++++.++++.|.+++.+.+||+|+
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~ 31 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG 31 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 3578999999999999999999999999987
No 82
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.11 E-value=1.6e-06 Score=72.24 Aligned_cols=59 Identities=20% Similarity=0.352 Sum_probs=52.9
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc
Q 015908 120 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 182 (398)
Q Consensus 120 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~ 182 (398)
+.+++++|++ ++.++++++++. ++++.|.+++.+++||++++ |+++|+|+.+|++....
T Consensus 66 ~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 66 ETKAEEFMTA--SLITIREDSPIT-GALALMRQFNIRHLPVVDDK-GNLKGIISIRDITRAID 124 (133)
T ss_dssp TCBGGGTSEE--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHH
T ss_pred ccCHHHHcCC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHHH
Confidence 5789999986 677899999999 99999999999999999865 89999999999987643
No 83
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.11 E-value=4.7e-06 Score=71.46 Aligned_cols=40 Identities=5% Similarity=-0.066 Sum_probs=37.3
Q ss_pred ccchhhhc--cCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 186 VPLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 186 ~~V~eIM~--r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.+++++|. +++.++++++++.++++.|.+++.+.+||+|+
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~ 56 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD 56 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC
Confidence 47899998 78999999999999999999999999999987
No 84
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.10 E-value=4.8e-06 Score=72.18 Aligned_cols=40 Identities=10% Similarity=0.090 Sum_probs=37.7
Q ss_pred ccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 186 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 186 ~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.+++++|.++++++++++++.+|++.|.+++.+.+||+|+
T Consensus 5 ~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~ 44 (160)
T 2o16_A 5 IKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDA 44 (160)
T ss_dssp CBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 4789999899999999999999999999999999999987
No 85
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.09 E-value=6e-06 Score=72.67 Aligned_cols=73 Identities=12% Similarity=0.169 Sum_probs=58.8
Q ss_pred CCCCHHHHHHHHHHhcCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccc
Q 015908 102 GDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 181 (398)
Q Consensus 102 G~L~~eE~~~I~~~l~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~ 181 (398)
|.++..+ ++.....-.+.+|+++| + ++.++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|++...
T Consensus 90 Givt~~d--l~~~~~~~~~~~v~~im-~--~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dil~~l 162 (172)
T 3lhh_A 90 GIISAKQ--LLSESIAGERLELVDLV-K--NCNFVPNSLSGM-ELLEHFRTTGSQMVFVVDEY-GDLKGLVTLQDMMDAL 162 (172)
T ss_dssp EEEEHHH--HHHHHHTTCCCCGGGGC-B--CCEEEETTCCHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred EEEEHHH--HHHHHhhcCcccHHHHh-c--CCeEeCCCCCHH-HHHHHHHHcCCeEEEEEeCC-CCEEEEeeHHHHHHHH
Confidence 4455433 33433333477899999 3 578999999999 99999999999999999876 8999999999999764
No 86
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.09 E-value=6.3e-06 Score=69.46 Aligned_cols=40 Identities=15% Similarity=0.259 Sum_probs=37.7
Q ss_pred ccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 186 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 186 ~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 44 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTAR 44 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 4789999999999999999999999999999999999997
No 87
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.07 E-value=5.2e-06 Score=68.95 Aligned_cols=41 Identities=12% Similarity=0.058 Sum_probs=38.7
Q ss_pred cccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 ~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 44 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG 44 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC
Confidence 45799999999999999999999999999999999999987
No 88
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.07 E-value=6.3e-06 Score=78.26 Aligned_cols=41 Identities=7% Similarity=0.235 Sum_probs=38.9
Q ss_pred cccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 ~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
...++++|.+++++|.+++++.+|++.|.+++.+.+||||+
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~ 52 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT 52 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec
Confidence 45799999999999999999999999999999999999987
No 89
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.06 E-value=3.7e-06 Score=70.94 Aligned_cols=59 Identities=15% Similarity=0.160 Sum_probs=52.5
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 182 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~ 182 (398)
.+.+++++|++ +.++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|++....
T Consensus 68 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 68 DSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHNHMAIVIDEY-GGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHTTC-
T ss_pred CCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHHh
Confidence 56789999974 67899999999 99999999999999999875 89999999999997653
No 90
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.06 E-value=3.1e-06 Score=70.70 Aligned_cols=60 Identities=25% Similarity=0.419 Sum_probs=53.7
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 182 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~ 182 (398)
..+.+++++|++ ++.++++++++. ++++.|.+++.+++||++ + |+++|+|+.+|++....
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHHH
Confidence 467889999986 678899999999 999999999999999998 4 89999999999987643
No 91
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.06 E-value=4.7e-06 Score=71.59 Aligned_cols=58 Identities=12% Similarity=0.130 Sum_probs=52.4
Q ss_pred ccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc
Q 015908 120 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 182 (398)
Q Consensus 120 ~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~ 182 (398)
..+|+++| + ++.++++++++. ++++.|.+++..++||++++ |+++|+|+.+|++....
T Consensus 85 ~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~~-g~~vGivt~~dil~~l~ 142 (153)
T 3oco_A 85 KAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVIDEY-GGTSGIITDKDVYEELF 142 (153)
T ss_dssp TSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEECTT-SCEEEEECHHHHHHHHH
T ss_pred CCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CCEEEEeeHHHHHHHHh
Confidence 67899999 3 578999999999 99999999999999999876 89999999999997653
No 92
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.05 E-value=8.4e-06 Score=66.73 Aligned_cols=39 Identities=15% Similarity=0.340 Sum_probs=36.5
Q ss_pred cchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 187 PLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 187 ~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 2 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 40 (125)
T 1pbj_A 2 RVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVKE 40 (125)
T ss_dssp CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEET
T ss_pred CHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEeC
Confidence 578899889999999999999999999999999999985
No 93
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.05 E-value=6.4e-06 Score=73.07 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=55.1
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 183 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~ 183 (398)
....+++++|.+ ++.++.+++++. ++++.|.+++.+++||+|++ |+++|+|+.+|++.....
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDDP-GRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECTT-CCEEEEEEHHHHTTTSCH
T ss_pred cccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHHHh
Confidence 456789999986 678899999999 99999999999999999875 899999999999986543
No 94
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.05 E-value=2.3e-06 Score=72.38 Aligned_cols=61 Identities=21% Similarity=0.394 Sum_probs=53.2
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 182 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~ 182 (398)
..+.+++++|++ +++++++++++. ++++.|.+++++++||++++ |+++|+|+.+|+++...
T Consensus 82 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 82 TNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVDSD-GKLVGIITRGNVVRAAL 142 (152)
T ss_dssp --CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred hccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CcEEEEEEHHHHHHHHH
Confidence 356789999997 567899999999 99999999999999999865 89999999999997643
No 95
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.05 E-value=7.3e-06 Score=71.52 Aligned_cols=39 Identities=5% Similarity=-0.039 Sum_probs=35.7
Q ss_pred cchhhhc--cCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 187 PLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 187 ~V~eIM~--r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.++++|+ .++.+|++++++.+|++.|.+++.+.+||+|+
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~ 56 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD 56 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC
Confidence 5788886 47899999999999999999999999999987
No 96
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.04 E-value=7.6e-06 Score=68.33 Aligned_cols=40 Identities=8% Similarity=0.163 Sum_probs=37.7
Q ss_pred ccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 186 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 186 ~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 47 (138)
T 2p9m_A 8 IKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD 47 (138)
T ss_dssp CBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECT
T ss_pred CCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECC
Confidence 4789999889999999999999999999999999999987
No 97
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.03 E-value=5.5e-06 Score=70.44 Aligned_cols=41 Identities=15% Similarity=0.149 Sum_probs=37.5
Q ss_pred cccchhhhc--cCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 AVPLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 ~~~V~eIM~--r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..+++++|. +++.++++++++.++++.|.+++.+.+||+|+
T Consensus 14 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~ 56 (150)
T 3lqn_A 14 QIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP 56 (150)
T ss_dssp HCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred cCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECC
Confidence 357999998 56899999999999999999999999999997
No 98
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.02 E-value=4e-06 Score=70.00 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=51.3
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccc
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 181 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~ 181 (398)
.+.+++++|.+ +.++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|+++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~pVvd~~-g~~~Giit~~Dil~~l 124 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASRNHLAIVIDEH-GGISGLVTMEDVLEQI 124 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHHH
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 46789999964 67899999999 99999999999999999875 8999999999998764
No 99
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.00 E-value=3.9e-06 Score=73.19 Aligned_cols=61 Identities=21% Similarity=0.380 Sum_probs=54.5
Q ss_pred cCcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccc
Q 015908 117 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 181 (398)
Q Consensus 117 ~L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~ 181 (398)
...+.+|+++|++ ++.++++++++. ++++.|.++++.++||++++ |+++|+|+.+|+++..
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~~ 154 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVDAD-GKLIGILTRGNVVRAA 154 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 4567889999996 567899999999 99999999999999999865 8999999999998764
No 100
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.00 E-value=4.5e-06 Score=71.90 Aligned_cols=60 Identities=20% Similarity=0.330 Sum_probs=53.4
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 182 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~ 182 (398)
..+.+++++|++ +.++++++++. ++++.|.++++.++||+|++ |+++|+|+.+|+++...
T Consensus 93 ~~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 93 LIAKNASEIMLD---PVYVHMDTPLE-EALKLMIDNNIQEMPVVDEK-GEIVGDLNSLEILLALW 152 (157)
T ss_dssp CSSCBHHHHCBC---CCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHH
T ss_pred HcCCcHHHHcCC---CeEECCCCCHH-HHHHHHHHCCCcEEEEEcCC-CEEEEEEEHHHHHHHHH
Confidence 467889999985 67899999999 99999999999999999865 89999999999987643
No 101
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.99 E-value=9.2e-06 Score=69.99 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=37.8
Q ss_pred cccchhhhcc--CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 AVPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 ~~~V~eIM~r--~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..+++++|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 13 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~ 55 (159)
T 1yav_A 13 EATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP 55 (159)
T ss_dssp TCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT
T ss_pred HhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECC
Confidence 3578999987 8999999999999999999999999999987
No 102
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=97.99 E-value=7.8e-06 Score=68.17 Aligned_cols=58 Identities=16% Similarity=0.225 Sum_probs=51.7
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccc
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 181 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~ 181 (398)
.+.+++++|.+ +.++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|+++..
T Consensus 70 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 70 GQKQLGAVMRP---IQVVLNNTALP-KVFDQMMTHRLQLALVVDEY-GTVLGLVTLEDIFEHL 127 (130)
T ss_dssp TTSBHHHHSEE---CCEEETTSCHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred CcCCHHHHhcC---CcCcCCCCcHH-HHHHHHHHcCCeEEEEEcCC-CCEEEEEEHHHHHHHH
Confidence 46789999963 67899999999 99999999999999999876 8999999999998753
No 103
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.98 E-value=8.5e-06 Score=69.78 Aligned_cols=61 Identities=16% Similarity=0.244 Sum_probs=53.0
Q ss_pred cccccccccccC----ccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccc
Q 015908 119 TEKTAKDAMTPI----SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 181 (398)
Q Consensus 119 ~~~tV~dIMtPr----~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~ 181 (398)
.+.+++++|.++ .++.++++++++. ++++.|.+++.+++||+|++ |+++|+|+.+|+++..
T Consensus 85 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 85 LDVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDEN-DVVKGIVSLSDILQAL 149 (152)
T ss_dssp TTSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred hcchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 356899999743 3678899999999 99999999999999999875 8999999999998754
No 104
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=97.98 E-value=5.2e-06 Score=68.94 Aligned_cols=58 Identities=10% Similarity=0.132 Sum_probs=51.6
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccc
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 181 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~ 181 (398)
.+.+++++|++ +.++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|+++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQRYHMAIVIDEF-GGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTTCCEEEEECTT-SCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 46789999964 46899999999 99999999999999999875 8999999999998754
No 105
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.97 E-value=1.1e-05 Score=70.14 Aligned_cols=41 Identities=15% Similarity=0.196 Sum_probs=37.5
Q ss_pred cccchhhhcc---CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 AVPLRKMIIR---RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 ~~~V~eIM~r---~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..+++++|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 23 ~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~ 66 (165)
T 3fhm_A 23 ATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA 66 (165)
T ss_dssp SCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 3579999874 6999999999999999999999999999997
No 106
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.96 E-value=1e-05 Score=69.19 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=37.6
Q ss_pred cccchhhhcc--CCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 AVPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 ~~~V~eIM~r--~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..+++++|.+ +++++++++++.++++.|.+++.+.+||+|+
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~ 52 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT 52 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC
Confidence 3578999876 8899999999999999999999999999987
No 107
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.96 E-value=6.8e-06 Score=68.85 Aligned_cols=58 Identities=17% Similarity=0.149 Sum_probs=51.0
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccc
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 181 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~ 181 (398)
...+++++|. ++.++++++++. ++++.|.+++...+||+|++ |+++|+|+.+|++...
T Consensus 68 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l 125 (130)
T 3hf7_A 68 TKEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNKKKVGLVVDEY-GDIQGLVTVEDILEEI 125 (130)
T ss_dssp CHHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHCCCEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred chhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcCCeEEEEEcCC-CCEEEEeeHHHHHHHH
Confidence 3457899994 467899999999 99999999999999999876 8999999999998764
No 108
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.95 E-value=1.6e-05 Score=66.49 Aligned_cols=40 Identities=10% Similarity=0.350 Sum_probs=36.3
Q ss_pred ccchh---hhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 186 VPLRK---MIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 186 ~~V~e---IM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.++++ +|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 8 ~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 50 (144)
T 2nyc_A 8 IPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE 50 (144)
T ss_dssp SBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred cchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcC
Confidence 35677 77788999999999999999999999999999987
No 109
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.94 E-value=8.5e-06 Score=67.70 Aligned_cols=40 Identities=13% Similarity=0.101 Sum_probs=37.5
Q ss_pred ccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 186 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 186 ~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 47 (133)
T 1y5h_A 8 TTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGD 47 (133)
T ss_dssp CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECG
T ss_pred cCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECC
Confidence 4789999899999999999999999999999999999987
No 110
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.91 E-value=1.9e-05 Score=67.74 Aligned_cols=41 Identities=12% Similarity=0.226 Sum_probs=38.3
Q ss_pred cccchhhhccCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 ~~~V~eIM~r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..+++++|.++++++++++++.+|++.|.+++.+.+||+|+
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~ 52 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVES 52 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESC
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEec
Confidence 45799999999999999999999999999999999999985
No 111
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.91 E-value=5.1e-06 Score=86.36 Aligned_cols=100 Identities=15% Similarity=0.225 Sum_probs=20.2
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccccccchhhhccCC--
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRI-- 196 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~~-- 196 (398)
.+.+|+++|++..+++++++++++. +++++|.++++..+||+|++ ++++|+|+.+|+++...... ...+.+.+-.
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~~~-~~~d~~~~l~v~ 235 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKLNALPIIDDD-QHLRYIVFRKDYDRSQVCHN-ELVDSQKRYLVG 235 (503)
T ss_dssp -----------------------------------------------------------------CC-CCBCTTSCBCCE
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEecHHHHhhhccc-chhccccccccc
Confidence 4568999999865689999999999 99999999999999999976 89999999999998754321 1222221111
Q ss_pred cEEcCCCCHHHHHHHHHhCCCcEEEE
Q 015908 197 PRVSEDMPLYDILNEFQKGHSHIAVV 222 (398)
Q Consensus 197 ~~V~~d~~l~daL~~m~~~~~~~apV 222 (398)
..++. ....+.++.|.+.+.+.+.|
T Consensus 236 a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 236 AGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp EEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred cccCc-hhHHHHHHHHHhhhccceEE
Confidence 23455 66777788998889887554
No 112
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.89 E-value=8.9e-06 Score=70.31 Aligned_cols=55 Identities=16% Similarity=0.197 Sum_probs=50.0
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhh
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL 178 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl 178 (398)
.+.+++++|++ +.++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|++
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRNHMAIVIDEY-GGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTCCEEEEECTT-SSEEEEEEHHHHC
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCCeEEEEECCC-CCEEEEEEHHHhc
Confidence 46789999974 67899999999 99999999999999999876 8999999999986
No 113
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.88 E-value=9e-06 Score=74.36 Aligned_cols=62 Identities=16% Similarity=0.218 Sum_probs=54.9
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 183 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~ 183 (398)
..+.+|+++|++ +++++++++++. ++++.|.+++...+||+|++ |+++|+|+..|++....+
T Consensus 113 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVD~~-g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 113 EPHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSREIELPVIDDA-GELIGRVTLRAATALVRE 174 (205)
T ss_dssp CTTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSCSEEEEECTT-SBEEEEEEHHHHHHHHHH
T ss_pred CCcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHH
Confidence 456789999985 678899999999 99999999999999999976 899999999999887543
No 114
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.88 E-value=2.5e-05 Score=69.21 Aligned_cols=41 Identities=12% Similarity=0.152 Sum_probs=37.4
Q ss_pred cccchhhhc--cCCcEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 185 AVPLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 185 ~~~V~eIM~--r~~~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..+++++|. ++++++++++++.++++.|.+++...+||+|+
T Consensus 35 ~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~ 77 (173)
T 3ocm_A 35 ERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG 77 (173)
T ss_dssp TSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS
T ss_pred CCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC
Confidence 468999986 46889999999999999999999999999987
No 115
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.83 E-value=2.3e-05 Score=68.69 Aligned_cols=40 Identities=13% Similarity=0.044 Sum_probs=35.9
Q ss_pred cccchhhhccC----CcEE--cCCCCHHHHHHHHHhCCCcEEEEEe
Q 015908 185 AVPLRKMIIRR----IPRV--SEDMPLYDILNEFQKGHSHIAVVYK 224 (398)
Q Consensus 185 ~~~V~eIM~r~----~~~V--~~d~~l~daL~~m~~~~~~~apVVD 224 (398)
..+++++|.+. +++| ++++++.+|++.|.+++.+.+||++
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~ 55 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVV 55 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEES
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEE
Confidence 45799999776 7888 9999999999999999999999993
No 116
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.76 E-value=4.8e-05 Score=79.25 Aligned_cols=104 Identities=15% Similarity=0.144 Sum_probs=79.7
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccccccchhhhccCCc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP 197 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~~~ 197 (398)
-.+.+|+++|++ .++++++++.++. ++++.|.+++...+||+|++ ++++|+|+.+|+++..... ..+.+.+.+..+
T Consensus 172 ~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVDe~-g~l~GiIT~~Dil~~~~~p-~a~~D~~~rl~V 247 (511)
T 3usb_A 172 DYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVDNN-GVLQGLITIKDIEKVIEFP-NSAKDKQGRLLV 247 (511)
T ss_dssp CSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHHCT-TCCBCTTSCBCC
T ss_pred cCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEeCC-CCEeeeccHHHHHHhhhcc-cchhhhccceee
Confidence 356789999996 4778999999999 99999999999999999976 8999999999999865332 233444433333
Q ss_pred --EEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 198 --RVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 198 --~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
.+.......+.+..+.+.+...+.|...
T Consensus 248 ~aavg~~~d~~era~aLveaGvd~I~Id~a 277 (511)
T 3usb_A 248 GAAVGVTADAMTRIDALVKASVDAIVLDTA 277 (511)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEEEECS
T ss_pred eeeeeeccchHHHHHHHHhhccceEEeccc
Confidence 3444555677778888889987776544
No 117
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.65 E-value=5.4e-05 Score=78.81 Aligned_cols=40 Identities=8% Similarity=0.130 Sum_probs=37.9
Q ss_pred cccchhhhccCCcEEcCC-CCHHHHHHHHHhCCCcEEEEEe
Q 015908 185 AVPLRKMIIRRIPRVSED-MPLYDILNEFQKGHSHIAVVYK 224 (398)
Q Consensus 185 ~~~V~eIM~r~~~~V~~d-~~l~daL~~m~~~~~~~apVVD 224 (398)
..+|+++|.+++++|.++ +++.++++.|.+++.+.+||+|
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd 423 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVD 423 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEE
Confidence 367999999999999999 9999999999999999999999
No 118
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.65 E-value=2.8e-05 Score=73.92 Aligned_cols=62 Identities=16% Similarity=0.295 Sum_probs=54.1
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 183 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~ 183 (398)
..+.+|+++|++ +++++++++++. ++++.|.+++...+||+|++ |+++|+|+..|++.....
T Consensus 196 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 196 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp CTTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHC--
T ss_pred CCCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeCC-CeEEEEEEHHHHHHHHHH
Confidence 357789999975 678899999999 99999999999999999876 899999999999976543
No 119
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.55 E-value=3.9e-05 Score=73.53 Aligned_cols=61 Identities=16% Similarity=0.294 Sum_probs=54.3
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 182 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~ 182 (398)
..+.+|+++|++ +++++++++++. ++++.|.+++..++||+|++ |+++|+|+..|++....
T Consensus 198 ~~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 198 DDDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTDYD-DHLLGIVTVDDIIDVID 258 (286)
T ss_dssp CTTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHH
T ss_pred CCCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHHH
Confidence 356789999985 678899999999 99999999999999999875 89999999999987653
No 120
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.42 E-value=8.7e-05 Score=79.06 Aligned_cols=57 Identities=5% Similarity=-0.028 Sum_probs=49.6
Q ss_pred ccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccccc
Q 015908 122 TAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 183 (398)
Q Consensus 122 tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~ 183 (398)
+++++|++ +++++++++++. ++++.|.+++.+++||+ ++ |+++|+|+.+|+++...+
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~-ea~~~M~~~~i~~lpVv-e~-G~lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVR-QLHFLFVMLMPSMIYVT-ER-GKLVGIVEREDVAYGYSN 625 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHH-HHHHHHHHTCCSEEEEE-ET-TEEEEEEEGGGTEECCCC
T ss_pred ccchhhcC--CCceecCCCcHH-HHHHHHHhcCCCEEEEE-EC-CEEEEEEehhhHHHHHhh
Confidence 48999996 677999999999 99999999999999999 44 899999999999987544
No 121
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.39 E-value=9.5e-05 Score=76.59 Aligned_cols=100 Identities=13% Similarity=0.092 Sum_probs=15.2
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccccccchhhhc--cCC
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMII--RRI 196 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~--r~~ 196 (398)
.+.+|+++|+|+.++++++++.++. +++++|.+++...+||+|++ ++++|+|+.+|+++...... ...+.-- .-.
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~p~-a~kd~~grl~v~ 221 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENRIEKMLVVDEN-FYLRGLVTFRDIEKAKTYPL-ASKDEQGRLRVG 221 (490)
T ss_dssp ----------------------------------------------------------------CTT-CCBCTTSCBCCE
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEehHHhhhhccCcc-hhhhccCcceee
Confidence 4568999999755688999999999 99999999999999999976 89999999999998643211 1111100 001
Q ss_pred cEEcCCCCHHHHHHHHHhCCCcEEE
Q 015908 197 PRVSEDMPLYDILNEFQKGHSHIAV 221 (398)
Q Consensus 197 ~~V~~d~~l~daL~~m~~~~~~~ap 221 (398)
..+.....-.+.++.+.+.+...+.
T Consensus 222 aavG~~~~~~~~a~~l~~aG~d~I~ 246 (490)
T 4avf_A 222 AAVGTGADTGERVAALVAAGVDVVV 246 (490)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEEE
T ss_pred eeeccccchHHHHHHHhhcccceEE
Confidence 1244444455666666666776443
No 122
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.32 E-value=0.00014 Score=74.99 Aligned_cols=61 Identities=16% Similarity=0.303 Sum_probs=54.7
Q ss_pred CcccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccc
Q 015908 118 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 182 (398)
Q Consensus 118 L~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~ 182 (398)
-.+.+++++|++ +++++++++++. ++++.|.+++...+||+|++ |+++|+|+.+|++....
T Consensus 216 ~~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVDe~-g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 216 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp CTTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred CCCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCCcEEEEEcCC-CEEEEEEehHhhHHHHH
Confidence 357789999985 678999999999 99999999999999999976 89999999999987653
No 123
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.22 E-value=0.00018 Score=74.24 Aligned_cols=100 Identities=22% Similarity=0.302 Sum_probs=22.2
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccccccchhhhccCCc-
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP- 197 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~~~- 197 (398)
.+.+++++|+++.+++++++++++. +++++|.+++..++||+|++ ++++|+|+.+|+++..... ...++. .....
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~~~-~~~~D~-~~~l~v 228 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHRIEKLPLVSKD-NKLVGLITIKDIMSVIEHP-NAARDE-KGRLLV 228 (494)
T ss_dssp ----------------------------------------------------------CHHHHTCT-TCCBCT-TSCBCC
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHhhhccc-cccccc-hhhhcc
Confidence 3568999999755788999999999 99999999999999999976 8999999999998764322 111121 01111
Q ss_pred --EEcCCCCHHHHHHHHHhCCCcEEEE
Q 015908 198 --RVSEDMPLYDILNEFQKGHSHIAVV 222 (398)
Q Consensus 198 --~V~~d~~l~daL~~m~~~~~~~apV 222 (398)
-+.......+.+..+.+.+...+.+
T Consensus 229 ga~ig~~~~~~~~a~~l~~aGvd~v~i 255 (494)
T 1vrd_A 229 GAAVGTSPETMERVEKLVKAGVDVIVI 255 (494)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred ccccCcCHhHHHHHHHHHHhCCCEEEE
Confidence 2344455677777788877776655
No 124
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.19 E-value=0.00013 Score=75.83 Aligned_cols=61 Identities=16% Similarity=0.240 Sum_probs=44.1
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccc
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 181 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~ 181 (398)
.+.+++++|+|+.++++++++.++. +++++|.+++...+||+|++ ++++|+|+.+|+++..
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGA-EVQEKMHKARVEKILVVNDE-FQLKGMITAKDFHKAE 207 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC-----CGGGTCC---CCCEEEECTT-SBCCEEECCC-----C
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CCEEEeehHhHHHHhh
Confidence 5678999999765688999999999 99999999999999999976 8999999999998764
No 125
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.08 E-value=0.00027 Score=73.36 Aligned_cols=99 Identities=11% Similarity=0.121 Sum_probs=57.8
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccccccchhhhccCCc-
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP- 197 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~~~- 197 (398)
.+.+++++|++..++.++++++++. +++++|.+++..++||+|++ ++++|+|+.+|+++...... ...+ +.....
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~~~~-~~~~-~~~rl~v 246 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLK-EANEILQRSKKGKLPIVNDC-DELVAIIARTDLKKNRDYPL-ASKD-SQKQLLC 246 (514)
T ss_dssp ----------CCBCCCCEETTCCST-TTTTHHHHHTCSCCCEESSS-SCCC----CCCCSSCCCCTT-CCBC-TTSCBCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCCcccEECCC-CeEEEEEEHHHHHHHhhCcc-hhcc-cCCceee
Confidence 4568999999655788999999999 99999999999999999976 89999999999987653221 1111 111111
Q ss_pred --EEcCCCCHHHHHHHHHhCCCcEEE
Q 015908 198 --RVSEDMPLYDILNEFQKGHSHIAV 221 (398)
Q Consensus 198 --~V~~d~~l~daL~~m~~~~~~~ap 221 (398)
.+.......+.++.+.+.+...+.
T Consensus 247 ga~vG~~~~~~~~a~~~~~aG~d~v~ 272 (514)
T 1jcn_A 247 GAAVGTREDDKYRLDLLTQAGVDVIV 272 (514)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEE
T ss_pred eeEecCchhhHHHHHHHHHcCCCEEE
Confidence 133334455666666666666443
No 126
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.97 E-value=0.00031 Score=73.24 Aligned_cols=59 Identities=19% Similarity=0.298 Sum_probs=0.0
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhccc
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 181 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~ 181 (398)
.+.+|+++||+ ++++++.+.+++ ++.++|.+++...+||+|++ ++++|+|+.+|+.+..
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~kieklpVVd~~-g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLE-KANSLLRETKKGKLPIVDSN-GHLVSLVARSDLLKNQ 256 (556)
T ss_dssp ---------------------------------------------------------------
T ss_pred cceEhhhhccc--ceEEecCCCCHH-HHHHHHHHccccceeEEccC-CcEEEEEEechhhhhh
Confidence 35689999996 699999999999 99999999999999999986 9999999999998753
No 127
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.92 E-value=0.00059 Score=70.36 Aligned_cols=99 Identities=18% Similarity=0.254 Sum_probs=18.2
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccccccchhhhccCC--
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRI-- 196 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~~-- 196 (398)
.+.+++++|++ +++++++++++. ++++.|.+++...+||+|++ ++++|+|+.+|+++...... ...+.+.+-.
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~~~~lpVVde~-g~lvGiiT~~Dil~~~~~~~-~~~~~~g~~~v~ 222 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVE-EALKIMIENRIDRLPVVDER-GKLVGLITMSDLVARKKYKN-AVRDENGELLVA 222 (486)
T ss_dssp ---------------------------------------------------------------CCTT-CCBCTTSCBCCE
T ss_pred CCCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcCCCEEEEEecC-CeEEEEEEHHHHHHhhhccc-cccccCCceeec
Confidence 35689999985 678999999999 99999999999999999876 89999999999998754221 1111111101
Q ss_pred cEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q 015908 197 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 225 (398)
Q Consensus 197 ~~V~~d~~l~daL~~m~~~~~~~apVVDe 225 (398)
..+.. .. .+.+..|.+.+...+ |+|.
T Consensus 223 ~~~~~-~~-~~~a~~l~~~gvd~l-vvdt 248 (486)
T 2cu0_A 223 AAVSP-FD-IKRAIELDKAGVDVI-VVDT 248 (486)
T ss_dssp EEECT-TC-HHHHHHHHHTTCSEE-EEEC
T ss_pred ceech-hh-HHHHHHHHHhcCCce-EEEe
Confidence 11333 33 566778888888875 5553
No 128
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.77 E-value=0.0034 Score=64.45 Aligned_cols=100 Identities=12% Similarity=0.162 Sum_probs=69.6
Q ss_pred cccccccccccCccEEEEeCCCChHHHHHHHHHHcCCceeccccCCCCcEEEEEEchhhhcccccccccchhhhccCC--
Q 015908 119 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRI-- 196 (398)
Q Consensus 119 ~~~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~srlPVvd~d~~~IVGIVs~kDLl~~~~~~~~~V~eIM~r~~-- 196 (398)
.+.+++++|++ .+++++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++...... ...+...+-.
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVd~~-g~lvGivt~~Dil~~~~~~~-~~~d~~~~~~vg 225 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRIEKLPLVDNS-GRLSGLITIKDIEKVIEFPH-AAKDEFGRLLVA 225 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTCSEEEEECTT-SBEEEEEEHHHHHHHHHCTT-CCBCTTSCBCCE
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEEHHHHHHHHhccc-cccCcCCcEEEE
Confidence 56789999985 2567899999999 99999999999999999976 89999999999987654211 1111100001
Q ss_pred cEEcCCCCHHHHHHHHHhCCCcEEEE
Q 015908 197 PRVSEDMPLYDILNEFQKGHSHIAVV 222 (398)
Q Consensus 197 ~~V~~d~~l~daL~~m~~~~~~~apV 222 (398)
..+.......+.+..+.+.+...+.+
T Consensus 226 ~~i~~~~~~~~~a~~l~~~G~d~ivi 251 (491)
T 1zfj_A 226 AAVGVTSDTFERAEALFEAGADAIVI 251 (491)
T ss_dssp EEECSSTTHHHHHHHHHHHTCSEEEE
T ss_pred EeccCchhHHHHHHHHHHcCCCeEEE
Confidence 12333334455566666667776553
Done!