BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015909
(398 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 182/313 (58%), Gaps = 16/313 (5%)
Query: 46 TPRSEGEILQSSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGT 105
P E + +K FS +L+ A+ NF ++LG GGFG V+KG R
Sbjct: 12 VPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG----------RLAD 61
Query: 106 GMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGS 164
G L+AVKRL +E QG + ++ TE+ + H NL++L G+C+ RLLVY +M GS
Sbjct: 62 GTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 121
Query: 165 MENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHS-AEPKVIYRDFKASNILLDSNYNA 223
+ + L R PL W R +IALG+A GLA+LH +PK+I+RD KA+NILLD + A
Sbjct: 122 VASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 181
Query: 224 KLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
+ DFGLA+ D HV V GT G+ APEYL+TG + K+D++ +GV+LLE+++G+
Sbjct: 182 VVGDFGLAKLMDYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
Query: 284 RAIDKNRPTGEHN--LVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSV 341
RA D R + + L++W K L K ++ ++D L+G + + ++ +AL C
Sbjct: 241 RAFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQS 299
Query: 342 EPKLRPDMDEVVK 354
P RP M EVV+
Sbjct: 300 SPMERPKMSEVVR 312
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 214 bits (546), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 181/313 (57%), Gaps = 16/313 (5%)
Query: 46 TPRSEGEILQSSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGT 105
P E + +K FS +L+ A+ NF ++LG GGFG V+KG R
Sbjct: 4 VPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG----------RLAD 53
Query: 106 GMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGS 164
G L+AVKRL +E QG + ++ TE+ + H NL++L G+C+ RLLVY +M GS
Sbjct: 54 GXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 113
Query: 165 MENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHS-AEPKVIYRDFKASNILLDSNYNA 223
+ + L R PL W R +IALG+A GLA+LH +PK+I+RD KA+NILLD + A
Sbjct: 114 VASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173
Query: 224 KLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
+ DFGLA+ D HV V G G+ APEYL+TG + K+D++ +GV+LLE+++G+
Sbjct: 174 VVGDFGLAKLMDYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 232
Query: 284 RAIDKNRPTGEHN--LVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSV 341
RA D R + + L++W K L K ++ ++D L+G + + ++ +AL C
Sbjct: 233 RAFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQS 291
Query: 342 EPKLRPDMDEVVK 354
P RP M EVV+
Sbjct: 292 SPMERPKMSEVVR 304
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 168/288 (58%), Gaps = 13/288 (4%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW 125
DL AT NF ++G G FG V+KG + + G +A+KR E QG +E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEF 82
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRM 185
TEI L HP+LV L+G+C E + +L+Y++M G+++ HL+ +SW R+
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
+I +GAA GL +LH+ +I+RD K+ NILLD N+ K++DFG+++ G D++H+
Sbjct: 143 EICIGAARGLHYLHTR--AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
V GT GY PEY G LT KSD+YSFGVVL E+L R AI ++ P NL EWA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES- 259
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ ++ +++DP L + +K A++CL++ + RP M +V+
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 191 bits (485), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 167/288 (57%), Gaps = 13/288 (4%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW 125
DL AT NF ++G G FG V+KG + + G +A+KR E QG +E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEF 82
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRM 185
TEI L HP+LV L+G+C E + +L+Y++M G+++ HL+ +SW R+
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
+I +GAA GL +LH+ +I+RD K+ NILLD N+ K++DFG+++ G ++H+
Sbjct: 143 EICIGAARGLHYLHTR--AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
V GT GY PEY G LT KSD+YSFGVVL E+L R AI ++ P NL EWA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES- 259
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ ++ +++DP L + +K A++CL++ + RP M +V+
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 180/314 (57%), Gaps = 28/314 (8%)
Query: 50 EGEILQSSNIK--NFSYSDLRTATRNF--RPDSV----LGEGGFGSVFKGWVDEHSLAST 101
E + L+ S+ + +FS+ +L+ T NF RP SV +GEGGFG V+KG+V+ ++A
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVK 60
Query: 102 RPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMP 161
+ + I + L Q+ Q EI + + H NLV+L+G+ + D LVY +MP
Sbjct: 61 KLAAMVDITTEELKQQFDQ-------EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMP 113
Query: 162 RGSMENHLFRRGSYFQ---PLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLD 218
GS L R S PLSW +R KIA GAANG+ FLH E I+RD K++NILLD
Sbjct: 114 NGS----LLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLD 167
Query: 219 SNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLE 278
+ AK+SDFGLAR ++ + +R++GT Y APE L G +T KSDIYSFGVVLLE
Sbjct: 168 EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLE 226
Query: 279 ILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQC 338
I++G A+D++R L++ + ++ I +D ++ S + S+A QC
Sbjct: 227 IITGLPAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQC 283
Query: 339 LSVEPKLRPDMDEV 352
L + RPD+ +V
Sbjct: 284 LHEKKNKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 184 bits (467), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 179/314 (57%), Gaps = 28/314 (8%)
Query: 50 EGEILQSSNIK--NFSYSDLRTATRNF--RPDSV----LGEGGFGSVFKGWVDEHSLAST 101
E + L+ S+ + +FS+ +L+ T NF RP SV +GEGGFG V+KG+V+ ++A
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVK 60
Query: 102 RPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMP 161
+ + I + L Q+ Q EI + + H NLV+L+G+ + D LVY +MP
Sbjct: 61 KLAAMVDITTEELKQQFDQ-------EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMP 113
Query: 162 RGSMENHLFRRGSYFQ---PLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLD 218
GS L R S PLSW +R KIA GAANG+ FLH E I+RD K++NILLD
Sbjct: 114 NGS----LLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLD 167
Query: 219 SNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLE 278
+ AK+SDFGLAR ++ + R++GT Y APE L G +T KSDIYSFGVVLLE
Sbjct: 168 EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLE 226
Query: 279 ILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQC 338
I++G A+D++R L++ + ++ I +D ++ S + S+A QC
Sbjct: 227 IITGLPAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQC 283
Query: 339 LSVEPKLRPDMDEV 352
L + RPD+ +V
Sbjct: 284 LHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 171/301 (56%), Gaps = 26/301 (8%)
Query: 61 NFSYSDLRTATRNF--RPDSV----LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL 114
+FS+ +L+ T NF RP SV +GEGGFG V+KG+V+ ++A + + I + L
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 67
Query: 115 NQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGS 174
Q+ Q EI + + H NLV+L+G+ + D LVY +MP GS L R S
Sbjct: 68 KQQFDQ-------EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS----LLDRLS 116
Query: 175 YFQ---PLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLA 231
PLSW +R KIA GAANG+ FLH E I+RD K++NILLD + AK+SDFGLA
Sbjct: 117 CLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLA 174
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRP 291
R + + R++GT Y APE L G +T KSDIYSFGVVLLEI++G A+D++R
Sbjct: 175 RASEKFAQXVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 233
Query: 292 TGEHNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDE 351
L++ + ++ I +D ++ S + S+A QCL + RPD+ +
Sbjct: 234 P--QLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKK 290
Query: 352 V 352
V
Sbjct: 291 V 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 166/301 (55%), Gaps = 26/301 (8%)
Query: 61 NFSYSDLRTATRNF--RPDSV----LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL 114
+FS+ +L+ T NF RP SV GEGGFG V+KG+V+ ++A + + I + L
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 64
Query: 115 NQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGS 174
Q+ Q EI + H NLV+L+G+ + D LVY + P GS L R S
Sbjct: 65 KQQFDQ-------EIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGS----LLDRLS 113
Query: 175 YFQ---PLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLA 231
PLSW R KIA GAANG+ FLH E I+RD K++NILLD + AK+SDFGLA
Sbjct: 114 CLDGTPPLSWHXRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLA 171
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRP 291
R + +R++GT Y APE L G +T KSDIYSFGVVLLEI++G A+D++R
Sbjct: 172 RASEKFAQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 230
Query: 292 TGEHNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDE 351
L++ + ++ I +D + S + S+A QCL + RPD+ +
Sbjct: 231 P--QLLLDIKEEIEDEEKTIEDYIDKKXNDADS-TSVEAXYSVASQCLHEKKNKRPDIKK 287
Query: 352 V 352
V
Sbjct: 288 V 288
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 134/278 (48%), Gaps = 36/278 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK--EWLTEINYLGQLHH 137
+G G FG+V + + H G +AVK L ++ F + E+L E+ + +L H
Sbjct: 45 IGAGSFGTVHRA--EWH---------GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
PN+V +G + + +V E++ RGS+ L + G+ Q L R+ +A A G+ +
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNY 152
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
LH+ P +++RD K+ N+L+D Y K+ DFGL+R S GT + APE
Sbjct: 153 LHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR--LKASXFLXSKXAAGTPEWMAPEV 210
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHN--LVEWAKPYLTSKRRIFRVL 315
L KSD+YSFGV+L E+ + + +P G N V A + + I R L
Sbjct: 211 LRDEPSNEKSDVYSFGVILWELATLQ------QPWGNLNPAQVVAAVGFKCKRLEIPRNL 264
Query: 316 DPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+P++ A++ C + EP RP ++
Sbjct: 265 NPQV------------AAIIEGCWTNEPWKRPSFATIM 290
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 136/278 (48%), Gaps = 36/278 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK--EWLTEINYLGQLHH 137
+G G FG+V + + H G +AVK L ++ F + E+L E+ + +L H
Sbjct: 45 IGAGSFGTVHRA--EWH---------GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
PN+V +G + + +V E++ RGS+ L + G+ Q L R+ +A A G+ +
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNY 152
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
LH+ P +++R+ K+ N+L+D Y K+ DFGL+R + S S GT + APE
Sbjct: 153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPEV 210
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHN--LVEWAKPYLTSKRRIFRVL 315
L KSD+YSFGV+L E+ + + +P G N V A + + I R L
Sbjct: 211 LRDEPSNEKSDVYSFGVILWELATLQ------QPWGNLNPAQVVAAVGFKCKRLEIPRNL 264
Query: 316 DPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+P++ A++ C + EP RP ++
Sbjct: 265 NPQV------------AAIIEGCWTNEPWKRPSFATIM 290
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 141/288 (48%), Gaps = 44/288 (15%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINY 131
+ + V+G G FG V K A R +A+K++ E + K ++ E+
Sbjct: 9 KEIEVEEVVGRGAFGVVCK--------AKWRAKD---VAIKQIESESER--KAFIVELRQ 55
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSW---SLRMKIA 188
L +++HPN+VKL G CL + LV E+ GS+ N L G+ +PL + + M
Sbjct: 56 LSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL--HGA--EPLPYYTAAHAMSWC 109
Query: 189 LGAANGLAFLHSAEPK-VIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDKSHVSTRV 246
L + G+A+LHS +PK +I+RD K N+LL + K+ DFG A D ++H+ T
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-TNN 164
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
G+ + APE + + K D++S+G++L E+++ R+ D+ G + WA T
Sbjct: 165 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAVHNGT 222
Query: 307 SKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
I + P SL +C S +P RP M+E+VK
Sbjct: 223 RPPLIKNLPKP-------------IESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 115/217 (52%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
+G+GGFG V KG V + S+ + + +++ E + +E+ E+ + L+HP
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIK---SLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VKL Y L + +V EF+P G + + L + P+ WS+++++ L A G+ ++
Sbjct: 84 NIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYM 138
Query: 199 HSAEPKVIYRDFKASNILLDS-----NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
+ P +++RD ++ NI L S AK++DFGL++ H + ++G + +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS-----VHSVSGLLGNFQWM 193
Query: 254 APEYLATGH--LTAKSDIYSFGVVLLEILSGRRAIDK 288
APE + T K+D YSF ++L IL+G D+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 141/288 (48%), Gaps = 44/288 (15%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINY 131
+ + V+G G FG V K A R +A+K++ E + K ++ E+
Sbjct: 8 KEIEVEEVVGRGAFGVVCK--------AKWRAKD---VAIKQIESESER--KAFIVELRQ 54
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSW---SLRMKIA 188
L +++HPN+VKL G CL + LV E+ GS+ N L G+ +PL + + M
Sbjct: 55 LSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL--HGA--EPLPYYTAAHAMSWC 108
Query: 189 LGAANGLAFLHSAEPK-VIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDKSHVSTRV 246
L + G+A+LHS +PK +I+RD K N+LL + K+ DFG A D ++H+ T
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-TNN 163
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
G+ + APE + + K D++S+G++L E+++ R+ D+ G + WA T
Sbjct: 164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAVHNGT 221
Query: 307 SKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
I + P SL +C S +P RP M+E+VK
Sbjct: 222 RPPLIKNLPKP-------------IESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
+G G FG V G W+++ +A+K + +EG ++++ E + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-----------VAIKTI-REGAMSEEDFIEEAEVMMKLSHP 62
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L G CLE LV+EFM G + ++L + F + + L G+A+L
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 119
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
E VI+RD A N L+ N K+SDFG+ R D+ ST +A+PE
Sbjct: 120 E--EASVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 176
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGE 294
+ ++KSD++SFGV++ E+ S + +NR E
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 114/217 (52%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
+G+GGFG V KG V + S+ + + +++ E + +E+ E+ + L+HP
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIK---SLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VKL Y L + +V EF+P G + + L + P+ WS+++++ L A G+ ++
Sbjct: 84 NIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYM 138
Query: 199 HSAEPKVIYRDFKASNILLDS-----NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
+ P +++RD ++ NI L S AK++DFG ++ H + ++G + +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS-----VHSVSGLLGNFQWM 193
Query: 254 APEYLATGH--LTAKSDIYSFGVVLLEILSGRRAIDK 288
APE + T K+D YSF ++L IL+G D+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
+G G FG V G W+++ +A+K + +EG ++++ E + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-----------VAIKTI-REGAMSEEDFIEEAEVMMKLSHP 62
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L G CLE LV+EFM G + ++L + F + + L G+A+L
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 119
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
E VI+RD A N L+ N K+SDFG+ R D+ ST +A+PE
Sbjct: 120 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 176
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGE 294
+ ++KSD++SFGV++ E+ S + +NR E
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 114/217 (52%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
+G+GGFG V KG V + S+ + + +++ E + +E+ E+ + L+HP
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIK---SLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VKL G L + +V EF+P G + + L + P+ WS+++++ L A G+ ++
Sbjct: 84 NIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYM 138
Query: 199 HSAEPKVIYRDFKASNILLDS-----NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
+ P +++RD ++ NI L S AK++DF L++ H + ++G + +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS-----VHSVSGLLGNFQWM 193
Query: 254 APEYLATGH--LTAKSDIYSFGVVLLEILSGRRAIDK 288
APE + T K+D YSF ++L IL+G D+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 131/282 (46%), Gaps = 26/282 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE-GFQGHKEWLTEINYLGQLHHP 138
LGEG FG V D T GTG ++AVK L + G Q W EI+ L L+H
Sbjct: 22 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 139 NLVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
+++K G C + + LV E++P GS+ ++L R + + + A G+A
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMA 131
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH-VSTRVMGTYGYAAP 255
+LHS I+R+ A N+LLD++ K+ DFGLA+ P G + + V + AP
Sbjct: 132 YLHSQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 189
Query: 256 EYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVL 315
E L SD++SFGV L E+L+ + ++ PT L+ A+ +T R L
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLR-----L 243
Query: 316 DPRLEGQFSLPQAQKAAS----LALQCLSVEPKLRPDMDEVV 353
LE LP+ K L C E RP + ++
Sbjct: 244 TELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
+G G FG V G W+++ +A+K + +EG ++++ E + +L HP
Sbjct: 18 IGSGQFGLVHLGYWLNKDK-----------VAIKTI-REGAMSEEDFIEEAEVMMKLSHP 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L G CLE LV+EFM G + ++L + F + + L G+A+L
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 122
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
E VI+RD A N L+ N K+SDFG+ R D+ ST +A+PE
Sbjct: 123 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 179
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGE 294
+ ++KSD++SFGV++ E+ S + +NR E
Sbjct: 180 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
+G G FG V G W+++ +A+K + +EG ++++ E + +L HP
Sbjct: 13 IGSGQFGLVHLGYWLNKDK-----------VAIKTI-REGAMSEEDFIEEAEVMMKLSHP 60
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L G CLE LV+EFM G + ++L + F + + L G+A+L
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 117
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
E VI+RD A N L+ N K+SDFG+ R D+ ST +A+PE
Sbjct: 118 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 174
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGE 294
+ ++KSD++SFGV++ E+ S + +NR E
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 132/283 (46%), Gaps = 28/283 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE-WLTEINYLGQLHHP 138
LGEG FG V D T GTG ++AVK L + H+ W EI+ L L+H
Sbjct: 39 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 139 NLVKLVGYCLEDDHRL---LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
+++K G C ED LV E++P GS+ ++L R + + + A G+
Sbjct: 94 HIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGM 147
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH-VSTRVMGTYGYAA 254
A+LH+ I+RD A N+LLD++ K+ DFGLA+ P G + + V + A
Sbjct: 148 AYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA 205
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRV 314
PE L SD++SFGV L E+L+ + ++ PT L+ A+ +T R
Sbjct: 206 PECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLR----- 259
Query: 315 LDPRLEGQFSLPQAQKAAS----LALQCLSVEPKLRPDMDEVV 353
L LE LP+ K + L C E RP + ++
Sbjct: 260 LTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI 302
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
+G G FG V G W+++ +A+K + +EG +++ E + +L HP
Sbjct: 35 IGSGQFGLVHLGYWLNKDK-----------VAIKTI-KEGSMSEDDFIEEAEVMMKLSHP 82
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L G CLE LV+EFM G + ++L + F + + L G+A+L
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 139
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
E VI+RD A N L+ N K+SDFG+ R D+ ST +A+PE
Sbjct: 140 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 196
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGE 294
+ ++KSD++SFGV++ E+ S + +NR E
Sbjct: 197 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 232
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 26/282 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE-GFQGHKEWLTEINYLGQLHHP 138
LGEG FG V D T GTG ++AVK L + G Q W EI+ L L+H
Sbjct: 22 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 139 NLVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
+++K G C + + LV E++P GS+ ++L R + + + A G+A
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMA 131
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH-VSTRVMGTYGYAAP 255
+LH+ I+R+ A N+LLD++ K+ DFGLA+ P G + + V + AP
Sbjct: 132 YLHAQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 189
Query: 256 EYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVL 315
E L SD++SFGV L E+L+ + ++ PT L+ A+ +T R L
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLR-----L 243
Query: 316 DPRLEGQFSLPQAQKAAS----LALQCLSVEPKLRPDMDEVV 353
LE LP+ K L C E RP + ++
Sbjct: 244 TELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LGEG FG VF + ++L+ T+ ML+AVK L K++ E L L H +
Sbjct: 23 LGEGAFGKVFLA--ECYNLSPTK--DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYF------QP------LSWSLRMKI 187
+VK G C + D ++V+E+M G + L G QP L S + I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
A A+G+ +L A ++RD N L+ +N K+ DFG++RD + D V M
Sbjct: 139 ASQIASGMVYL--ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ PE + T +SD++SFGV+L EI +
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 131/284 (46%), Gaps = 37/284 (13%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 143
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARD--GPTGDKSHVSTRVMGTYGY 252
+ FL A K ++RD A N +LD + K++DFGLARD D H T +
Sbjct: 144 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 201
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIF 312
A E L T T KSD++SFGV+L E+++ R A P + N + YL RR+
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRRLL 255
Query: 313 R---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ DP E + L+C + ++RP E+V
Sbjct: 256 QPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 286
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 131/284 (46%), Gaps = 37/284 (13%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 146
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARD--GPTGDKSHVSTRVMGTYGY 252
+ FL A K ++RD A N +LD + K++DFGLARD D H T +
Sbjct: 147 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIF 312
A E L T T KSD++SFGV+L E+++ R A P + N + YL RR+
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRRLL 258
Query: 313 R---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ DP E + L+C + ++RP E+V
Sbjct: 259 QPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 289
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
+G G FG V G W+++ +A+K + +EG ++++ E + +L HP
Sbjct: 16 IGSGQFGLVHLGYWLNKDK-----------VAIKTI-REGAMSEEDFIEEAEVMMKLSHP 63
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L G CLE LV EFM G + ++L + F + + L G+A+L
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 120
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
E VI+RD A N L+ N K+SDFG+ R D+ ST +A+PE
Sbjct: 121 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVF 177
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGE 294
+ ++KSD++SFGV++ E+ S + +NR E
Sbjct: 178 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 131/284 (46%), Gaps = 37/284 (13%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 145
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARD--GPTGDKSHVSTRVMGTYGY 252
+ FL A K ++RD A N +LD + K++DFGLARD D H T +
Sbjct: 146 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIF 312
A E L T T KSD++SFGV+L E+++ R A P + N + YL RR+
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRRLL 257
Query: 313 R---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ DP E + L+C + ++RP E+V
Sbjct: 258 QPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 288
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 139/303 (45%), Gaps = 39/303 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 19 LGGGQFGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q +S + + +A ++ + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 260 TGHLTAKSDIYSFGVVLLEI----LSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVL 315
+ KSD+++FGV+L EI +S ID P+ + L+E
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGID---PSQVYELLE---------------K 225
Query: 316 DPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVKXXXXXXXXRNMHKRPQKEHQA 375
D R+E P +K L C P RP E+ + ++ +KE
Sbjct: 226 DYRMERPEGCP--EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGK 283
Query: 376 KGH 378
+G
Sbjct: 284 RGE 286
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 131/284 (46%), Gaps = 37/284 (13%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 145
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARD--GPTGDKSHVSTRVMGTYGY 252
+ FL A K ++RD A N +LD + K++DFGLARD D H T +
Sbjct: 146 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIF 312
A E L T T KSD++SFGV+L E+++ R A P + N + YL RR+
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRRLL 257
Query: 313 R---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ DP E + L+C + ++RP E+V
Sbjct: 258 QPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 288
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 131/284 (46%), Gaps = 37/284 (13%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 94 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 147
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 204
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARD--GPTGDKSHVSTRVMGTYGY 252
+ FL A K ++RD A N +LD + K++DFGLARD D H T +
Sbjct: 205 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIF 312
A E L T T KSD++SFGV+L E+++ R A P + N + YL RR+
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRRLL 316
Query: 313 R---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ DP E + L+C + ++RP E+V
Sbjct: 317 QPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 347
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 131/284 (46%), Gaps = 37/284 (13%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 146
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARD--GPTGDKSHVSTRVMGTYGY 252
+ FL A K ++RD A N +LD + K++DFGLARD D H T +
Sbjct: 147 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIF 312
A E L T T KSD++SFGV+L E+++ R A P + N + YL RR+
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRRLL 258
Query: 313 R---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ DP E + L+C + ++RP E+V
Sbjct: 259 QPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 289
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 124/240 (51%), Gaps = 32/240 (13%)
Query: 59 IKNFSYSDLRTATRNF---------RPDSVLGEGGFGSVFKGWVDEHSLASTRPGT-GML 108
I F++ D A R F + + V+G G FG V G + PG +
Sbjct: 11 IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHL-------KLPGKREIF 63
Query: 109 IAVKRLNQEGF--QGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSME 166
+A+K L + G+ + +++L+E + +GQ HPN++ L G + +++ EFM GS++
Sbjct: 64 VAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 167 NHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLS 226
+ L + F + ++ G A G+ +L A+ ++RD A NIL++SN K+S
Sbjct: 123 SFLRQNDGQFTVIQLVGMLR---GIAAGMKYL--ADMNYVHRDLAARNILVNSNLVCKVS 177
Query: 227 DFGLAR--DGPTGDKSHVSTRVMG---TYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
DFGL+R + T D ++ S +G + APE + T+ SD++S+G+V+ E++S
Sbjct: 178 DFGLSRFLEDDTSDPTYTSA--LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 131/284 (46%), Gaps = 37/284 (13%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 40 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 93
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 150
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARD--GPTGDKSHVSTRVMGTYGY 252
+ FL A K ++RD A N +LD + K++DFGLARD D H T +
Sbjct: 151 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 208
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIF 312
A E L T T KSD++SFGV+L E+++ R A P + N + YL RR+
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRRLL 262
Query: 313 R---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ DP E + L+C + ++RP E+V
Sbjct: 263 QPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 293
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 41/289 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEIN 130
N D V+G G FG V G L S + + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG---RLKLPSKKE---ISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN+++L G + ++V E+M GS+++ L + + F + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
A+G+ +L ++ ++RD A NIL++SN K+SDFGLAR D P + ++
Sbjct: 156 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-T 306
+ +PE +A T+ SD++S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRRIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
S + + + +D RL P A L L C + RP +++V
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 41/289 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEIN 130
N D V+G G FG V G L S + + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG---RLKLPSKKE---ISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN+++L G + ++V E+M GS+++ L + + F + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
A+G+ +L ++ ++RD A NIL++SN K+SDFGL+R D P + ++
Sbjct: 156 IASGMKYL--SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-T 306
+ +PE +A T+ SD++S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRRIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
S + + + +D RL P A L L C + RP +++V
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 41/289 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEIN 130
N D V+G G FG V G L S + + +A+K L + G+ + +++L E +
Sbjct: 34 NISIDKVVGAGEFGEVCSG---RLKLPSKKE---ISVAIKTL-KVGYTEKQRRDFLGEAS 86
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN+++L G + ++V E+M GS+++ L + + F + ++ G
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 143
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
A+G+ +L ++ ++RD A NIL++SN K+SDFGL+R D P + ++
Sbjct: 144 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 200
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-T 306
+ +PE +A T+ SD++S+G+VL E++S GE +PY
Sbjct: 201 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 242
Query: 307 SKRRIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
S + + + +D RL P A L L C + RP +++V
Sbjct: 243 SNQDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIV 289
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 41/289 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEIN 130
N D V+G G FG V G L S + + +A+K L + G+ + +++L E +
Sbjct: 17 NISIDKVVGAGEFGEVCSG---RLKLPSKKE---ISVAIKTL-KVGYTEKQRRDFLGEAS 69
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN+++L G + ++V E+M GS+++ L + + F + ++ G
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 126
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
A+G+ +L ++ ++RD A NIL++SN K+SDFGL+R D P + ++
Sbjct: 127 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 183
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-T 306
+ +PE +A T+ SD++S+G+VL E++S GE +PY
Sbjct: 184 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 225
Query: 307 SKRRIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
S + + + +D RL P A L L C + RP +++V
Sbjct: 226 SNQDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 41/289 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEIN 130
N D V+G G FG V G L S + + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG---RLKLPSKKE---ISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN+++L G + ++V E+M GS+++ L + + F + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
A+G+ +L ++ ++RD A NIL++SN K+SDFGL+R D P + ++
Sbjct: 156 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-T 306
+ +PE +A T+ SD++S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRRIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
S + + + +D RL P A L L C + RP +++V
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 41/289 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEIN 130
N D V+G G FG V G L S + + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG---RLKLPSKKE---ISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN+++L G + ++V E+M GS+++ L + + F + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
A+G+ +L ++ ++RD A NIL++SN K+SDFGL+R D P + ++
Sbjct: 156 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-T 306
+ +PE +A T+ SD++S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRRIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
S + + + +D RL P A L L C + RP +++V
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 41/289 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEIN 130
N D V+G G FG V G L S + + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG---RLKLPSKKE---ISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN+++L G + ++V E+M GS+++ L + + F + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
A+G+ +L ++ ++RD A NIL++SN K+SDFGL+R D P + ++
Sbjct: 156 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-T 306
+ +PE +A T+ SD++S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRRIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
S + + + +D RL P A L L C + RP +++V
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 41/289 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEIN 130
N D V+G G FG V G L S + + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG---RLKLPSKKE---ISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN+++L G + ++V E+M GS+++ L + + F + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
A+G+ +L ++ ++RD A NIL++SN K+SDFGL+R D P + ++
Sbjct: 156 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-T 306
+ +PE +A T+ SD++S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRRIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
S + + + +D RL P A L L C + RP +++V
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 41/289 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEIN 130
N D V+G G FG V G L S + + +A+K L + G+ + +++L E +
Sbjct: 44 NISIDKVVGAGEFGEVCSG---RLKLPSKKE---ISVAIKTL-KVGYTEKQRRDFLGEAS 96
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN+++L G + ++V E+M GS+++ L + + F + ++ G
Sbjct: 97 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 153
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
A+G+ +L ++ ++RD A NIL++SN K+SDFGL+R D P + ++
Sbjct: 154 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 210
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-T 306
+ +PE +A T+ SD++S+G+VL E++S GE +PY
Sbjct: 211 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 252
Query: 307 SKRRIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
S + + + +D RL P A L L C + RP +++V
Sbjct: 253 SNQDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIV 299
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 39/277 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 19 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q +S + + +A ++ + +L
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 260 TGHLTAKSDIYSFGVVLLEI----LSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVL 315
+ KSD+++FGV+L EI +S ID P+ + L+E
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGID---PSQVYELLE---------------K 225
Query: 316 DPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEV 352
D R+E P +K L C P RP E+
Sbjct: 226 DYRMERPEGCP--EKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 39/303 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 19 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q +S + + +A ++ + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLA 183
Query: 260 TGHLTAKSDIYSFGVVLLEI----LSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVL 315
+ KSD+++FGV+L EI +S ID P+ + L+E
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGID---PSQVYELLE---------------K 225
Query: 316 DPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVKXXXXXXXXRNMHKRPQKEHQA 375
D R+E P +K L C P RP E+ + ++ +KE
Sbjct: 226 DYRMERPEGCP--EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGK 283
Query: 376 KGH 378
+G
Sbjct: 284 RGE 286
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 41/289 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEIN 130
N D V+G G FG V G L S + + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG---RLKLPSKKE---ISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN+++L G + ++V E+M GS+++ L + + F + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
A+G+ +L ++ ++RD A NIL++SN K+SDFGL R D P + ++
Sbjct: 156 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-T 306
+ +PE +A T+ SD++S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRRIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
S + + + +D RL P A L L C + RP +++V
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LGEG FG VF + ++L + +L+AVK L K++ E L L H +
Sbjct: 21 LGEGAFGKVFLA--ECYNLCPEQ--DKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHL---------FRRGSYFQPLSWSLRMKIALG 190
+VK G C+E D ++V+E+M G + L G+ L+ S + IA
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
A G+ +L A ++RD N L+ N K+ DFG++RD + D V M
Sbjct: 137 IAAGMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ PE + T +SD++S GVVL EI +
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 32/235 (13%)
Query: 72 RNFRPDS-----VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL 126
R FRP VLG+G FG K T TG ++ +K L + + + +L
Sbjct: 5 RIFRPSDLIHGEVLGKGCFGQAIK---------VTHRETGEVMVMKELIRFDEETQRTFL 55
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ + L HPN++K +G +D + E++ G++ + S + WS R+
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQY---PWSQRVS 112
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR------DGPTGDKS 240
A A+G+A+LHS +I+RD + N L+ N N ++DFGLAR P G +S
Sbjct: 113 FAKDIASGMAYLHSM--NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRS 170
Query: 241 ------HVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKN 289
V+G + APE + K D++SFG+VL EI+ GR D +
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPD 224
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 41/289 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEIN 130
N D V+G G FG V G L S + + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG---RLKLPSKKE---ISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN+++L G + ++V E M GS+++ L + + F + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
A+G+ +L ++ ++RD A NIL++SN K+SDFGL+R D P + ++
Sbjct: 156 IASGMKYL--SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-T 306
+ +PE +A T+ SD++S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRRIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
S + + + +D RL P A L L C + RP +++V
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 109/247 (44%), Gaps = 21/247 (8%)
Query: 50 EGEILQSSNIKNFSYSDLRTATRNFRPDSVL----GEGGFGSVFKGWVDEHSLASTRPGT 105
+G LQ I+N Y R D VL GEG FG VF + H+L +
Sbjct: 15 KGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLA--ECHNLLPEQ--D 70
Query: 106 GMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSM 165
ML+AVK L + +++ E L L H ++V+ G C E L+V+E+M G +
Sbjct: 71 KMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 130
Query: 166 ENHLFRRGSYFQ-----------PLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASN 214
L G + PL + +A A G+ +L A ++RD N
Sbjct: 131 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL--AGLHFVHRDLATRN 188
Query: 215 ILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGV 274
L+ K+ DFG++RD + D V R M + PE + T +SD++SFGV
Sbjct: 189 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 248
Query: 275 VLLEILS 281
VL EI +
Sbjct: 249 VLWEIFT 255
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 41/289 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEIN 130
N D V+G G FG V G L S + + +A+K L + G+ + +++L E +
Sbjct: 17 NISIDKVVGAGEFGEVCSG---RLKLPSKKE---ISVAIKTL-KVGYTEKQRRDFLGEAS 69
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN+++L G + ++V E M GS+++ L + + F + ++ G
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---G 126
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
A+G+ +L ++ ++RD A NIL++SN K+SDFGL+R D P + ++
Sbjct: 127 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 183
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-T 306
+ +PE +A T+ SD++S+G+VL E++S GE +PY
Sbjct: 184 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 225
Query: 307 SKRRIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
S + + + +D RL P A L L C + RP +++V
Sbjct: 226 SNQDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 41/289 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEIN 130
N D V+G G FG V G L S + + +A+K L + G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG---RLKLPSKKE---ISVAIKTL-KVGYTEKQRRDFLGEAS 98
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN+++L G + ++V E M GS+++ L + + F + ++ G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---G 155
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
A+G+ +L ++ ++RD A NIL++SN K+SDFGL+R D P + ++
Sbjct: 156 IASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-T 306
+ +PE +A T+ SD++S+G+VL E++S GE +PY
Sbjct: 213 -PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS----------YGE-------RPYWEM 254
Query: 307 SKRRIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
S + + + +D RL P A L L C + RP +++V
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 37/284 (13%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 144
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L A K ++RD A N +LD + K++DFGLARD + V + +
Sbjct: 145 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIF 312
A E L T T KSD++SFGV+L E+++ R A P + N + YL RR+
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRRLL 256
Query: 313 R---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ DP E + L+C + ++RP E+V
Sbjct: 257 QPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 287
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 133/286 (46%), Gaps = 41/286 (14%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 145
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS----TRVMGTY 250
+ +L A K ++RD A N +LD + K++DFGLARD DK + S T
Sbjct: 146 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD--MYDKEYYSVHNKTGAKLPV 201
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ A E L T T KSD++SFGV+L E+++ R A P + N + YL RR
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRR 255
Query: 311 IFR---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ + DP E + L+C + ++RP E+V
Sbjct: 256 LLQPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 288
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 133/286 (46%), Gaps = 41/286 (14%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 54 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 107
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 164
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS----TRVMGTY 250
+ +L A K ++RD A N +LD + K++DFGLARD DK + S T
Sbjct: 165 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD--MYDKEYYSVHNKTGAKLPV 220
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ A E L T T KSD++SFGV+L E+++ R A P + N + YL RR
Sbjct: 221 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRR 274
Query: 311 IFR---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ + DP E + L+C + ++RP E+V
Sbjct: 275 LLQPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 307
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 133/286 (46%), Gaps = 41/286 (14%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 145
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS----TRVMGTY 250
+ +L A K ++RD A N +LD + K++DFGLARD DK + S T
Sbjct: 146 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD--MYDKEYYSVHNKTGAKLPV 201
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ A E L T T KSD++SFGV+L E+++ R A P + N + YL RR
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRR 255
Query: 311 IFR---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ + DP E + L+C + ++RP E+V
Sbjct: 256 LLQPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 288
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 133/286 (46%), Gaps = 41/286 (14%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 30 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 83
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 140
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS----TRVMGTY 250
+ +L A K ++RD A N +LD + K++DFGLARD DK + S T
Sbjct: 141 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD--MYDKEYYSVHNKTGAKLPV 196
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ A E L T T KSD++SFGV+L E+++ R A P + N + YL RR
Sbjct: 197 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRR 250
Query: 311 IFR---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ + DP E + L+C + ++RP E+V
Sbjct: 251 LLQPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 283
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q +S + + +A ++ + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 186 YNKFSIKSDVWAFGVLLWEI 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q +S + + +A ++ + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 186 YNKFSIKSDVWAFGVLLWEI 205
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 133/286 (46%), Gaps = 41/286 (14%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 144
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS----TRVMGTY 250
+ +L A K ++RD A N +LD + K++DFGLARD DK + S T
Sbjct: 145 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD--MYDKEYYSVHNKTGAKLPV 200
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ A E L T T KSD++SFGV+L E+++ R A P + N + YL RR
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRR 254
Query: 311 IFR---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ + DP E + L+C + ++RP E+V
Sbjct: 255 LLQPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 287
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 133/286 (46%), Gaps = 41/286 (14%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 143
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS----TRVMGTY 250
+ +L A K ++RD A N +LD + K++DFGLARD DK + S T
Sbjct: 144 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD--MYDKEYYSVHNKTGAKLPV 199
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ A E L T T KSD++SFGV+L E+++ R A P + N + YL RR
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRR 253
Query: 311 IFR---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ + DP E + L+C + ++RP E+V
Sbjct: 254 LLQPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 286
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q +S + + +A ++ + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 191 YNKFSIKSDVWAFGVLLWEI 210
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LGEG FG VF + H+L + ML+AVK L + +++ E L L H +
Sbjct: 26 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQ-----------PLSWSLRMKIA 188
+V+ G C E L+V+E+M G + L G + PL + +A
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
A G+ +L A ++RD N L+ K+ DFG++RD + D V R M
Sbjct: 142 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 249 TYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ PE + T +SD++SFGVVL EI +
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 133/286 (46%), Gaps = 41/286 (14%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 27 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 80
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 137
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS----TRVMGTY 250
+ +L A K ++RD A N +LD + K++DFGLARD DK + S T
Sbjct: 138 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD--MYDKEYYSVHNKTGAKLPV 193
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ A E L T T KSD++SFGV+L E+++ R A P + N + YL RR
Sbjct: 194 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRR 247
Query: 311 IFR---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ + DP E + L+C + ++RP E+V
Sbjct: 248 LLQPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 280
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 133/286 (46%), Gaps = 41/286 (14%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 53 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 106
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 163
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS----TRVMGTY 250
+ +L A K ++RD A N +LD + K++DFGLARD DK + S T
Sbjct: 164 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD--MYDKEYYSVHNKTGAKLPV 219
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ A E L T T KSD++SFGV+L E+++ R A P + N + YL RR
Sbjct: 220 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRR 273
Query: 311 IFR---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ + DP E + L+C + ++RP E+V
Sbjct: 274 LLQPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 306
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q +S + + +A ++ + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 186 YNKFSIKSDVWAFGVLLWEI 205
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 133/286 (46%), Gaps = 41/286 (14%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
+ V+G G FG V+ G + ++ G + AVK LN+ G ++LTE +
Sbjct: 32 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 85
Query: 136 HHPNLVKLVGYCLEDDHR-LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
HPN++ L+G CL + L+V +M G + N F R P L + L A G
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDL-IGFGLQVAKG 142
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS----TRVMGTY 250
+ +L A K ++RD A N +LD + K++DFGLARD DK + S T
Sbjct: 143 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD--MYDKEYYSVHNKTGAKLPV 198
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ A E L T T KSD++SFGV+L E+++ R A P + N + YL RR
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGA----PPYPDVNTFD-ITVYLLQGRR 252
Query: 311 IFR---VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ + DP E + L+C + ++RP E+V
Sbjct: 253 LLQPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 285
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LGEG FG VF + H+L + ML+AVK L + +++ E L L H +
Sbjct: 20 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQ-----------PLSWSLRMKIA 188
+V+ G C E L+V+E+M G + L G + PL + +A
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
A G+ +L A ++RD N L+ K+ DFG++RD + D V R M
Sbjct: 136 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 249 TYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ PE + T +SD++SFGVVL EI +
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 19/211 (9%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTG-MLIAVKRLNQEGF--QGHKEWLTEINYLG 133
+ V+G G FG V +G + PG +A+K L + G+ + +E+L+E + +G
Sbjct: 21 EEVIGAGEFGEVCRGRLKA-------PGKKESCVAIKTL-KGGYTERQRREFLSEASIMG 72
Query: 134 QLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAAN 193
Q HPN+++L G +++ EFM G++++ L F + ++ G A+
Sbjct: 73 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIAS 129
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG---TY 250
G+ +L AE ++RD A NIL++SN K+SDFGL+R T +G
Sbjct: 130 GMRYL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPI 187
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE +A T+ SD +S+G+V+ E++S
Sbjct: 188 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q +S + + +A ++ + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 186 YNKFSIKSDVWAFGVLLWEI 205
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 114/229 (49%), Gaps = 40/229 (17%)
Query: 77 DSVLGEGGFGSVFKG-WV-DEHSLASTR--PGTGMLIAVKRLNQEGFQGHKEWLTEINYL 132
+ ++G GGFG V++ W+ DE ++ + R P + ++ + QE
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEA-----------KLF 60
Query: 133 GQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAA 192
L HPN++ L G CL++ + LV EF G + L G P + + A+ A
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPP---DILVNWAVQIA 115
Query: 193 NGLAFLHS-AEPKVIYRDFKASNILLD--------SNYNAKLSDFGLARDGPTGDKSHVS 243
G+ +LH A +I+RD K+SNIL+ SN K++DFGLAR+ H +
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW------HRT 169
Query: 244 TRV--MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR---RAID 287
T++ G Y + APE + + SD++S+GV+L E+L+G R ID
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 22 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 130 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 186
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 187 YNKFSIKSDVWAFGVLLWEI 206
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 134/286 (46%), Gaps = 39/286 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHP 138
LG+G FG V++G + P T +A+K +N+ + E+L E + + + +
Sbjct: 18 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHL------FRRGSYFQPLSWSLRMKIALGAA 192
++V+L+G + L++ E M RG ++++L P S S +++A A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
+G+A+L++ K ++RD A N ++ ++ K+ DFG+ RD D + + +
Sbjct: 134 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 191
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-TSKRRI 311
+PE L G T SD++SFGVVL EI + L E +PY S ++
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAE--QPYQGLSNEQV 234
Query: 312 FRVLDPRLEGQFSLPQAQKAASLALQ----CLSVEPKLRPDMDEVV 353
R + +EG L + + L+ C PK+RP E++
Sbjct: 235 LRFV---MEGGL-LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 190
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 191 YNKFSIKSDVWAFGVLLWEI 210
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 191 YNKFSIKSDVWAFGVLLWEI 210
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 22 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 130 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLA 186
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 187 YNKFSIKSDVWAFGVLLWEI 206
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 120/235 (51%), Gaps = 30/235 (12%)
Query: 62 FSYSDLRTATRNF---------RPDSVLGEGGFGSVFKGWVDEHSLASTRPGT-GMLIAV 111
F++ D A R F + + V+G G FG V G + PG + +A+
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRL-------KVPGKREICVAI 62
Query: 112 KRLNQEGF--QGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHL 169
K L + G+ + +++L+E + +GQ HPN++ L G + +++ E+M GS++ L
Sbjct: 63 KTL-KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 121
Query: 170 FRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFG 229
+ F + ++ G +G+ +L ++ ++RD A NIL++SN K+SDFG
Sbjct: 122 RKNDGRFTVIQLVGMLR---GIGSGMKYL--SDMSAVHRDLAARNILVNSNLVCKVSDFG 176
Query: 230 LAR---DGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
++R D P + ++ + APE +A T+ SD++S+G+V+ E++S
Sbjct: 177 MSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 131 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLA 187
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 188 YNKFSIKSDVWAFGVLLWEI 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 191 YNKFSIKSDVWAFGVLLWEI 210
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 38/282 (13%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHH 137
V+G G FG V+KG + S P +A+K L + + ++L E +GQ H
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVP-----VAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 105
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
N+++L G + +++ E+M G+++ L + F L ++ G A G+ +
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKY 162
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVMGTYGYAA 254
L A ++RD A NIL++SN K+SDFGL+R D P + ++ + A
Sbjct: 163 L--ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIRWTA 218
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT-SKRRIFR 313
PE ++ T+ SD++SFG+V+ E+++ GE +PY S + +
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMT----------YGE-------RPYWELSNHEVMK 261
Query: 314 VLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
++ RL P A L +QC E RP ++V
Sbjct: 262 AINDGFRLPTPMDCPSA--IYQLMMQCWQQERARRPKFADIV 301
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 19/211 (9%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTG-MLIAVKRLNQEGF--QGHKEWLTEINYLG 133
+ V+G G FG V +G + PG +A+K L + G+ + +E+L+E + +G
Sbjct: 19 EEVIGAGEFGEVCRGRLKA-------PGKKESCVAIKTL-KGGYTERQRREFLSEASIMG 70
Query: 134 QLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAAN 193
Q HPN+++L G +++ EFM G++++ L F + ++ G A+
Sbjct: 71 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIAS 127
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG---TY 250
G+ +L AE ++RD A NIL++SN K+SDFGL+R T +G
Sbjct: 128 GMRYL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPI 185
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE +A T+ SD +S+G+V+ E++S
Sbjct: 186 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 131 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 188 YNKFSIKSDVWAFGVLLWEI 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 131 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 188 YNKFSIKSDVWAFGVLLWEI 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 25 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 74
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 133 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 189
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 190 YNKFSIKSDVWAFGVLLWEI 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 191 YNKFSIKSDVWAFGVLLWEI 210
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 186 YNKFSIKSDVWAFGVLLWEI 205
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 34 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 83
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 142 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 198
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 199 YNKFSIKSDVWAFGVLLWEI 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 186 YNKFSIKSDVWAFGVLLWEI 205
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE-GFQGHKEWLTEINYLGQLHHP 138
LGEG FG V + T GTG ++AVK L + G Q W EI L L+H
Sbjct: 17 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 139 NLVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
++VK G C + + LV E++P GS+ ++L R L + A G+A
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMA 126
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH-VSTRVMGTYGYAAP 255
+LH+ I+R A N+LLD++ K+ DFGLA+ P G + + V + AP
Sbjct: 127 YLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 184
Query: 256 EYLATGHLTAKSDIYSFGVVLLEILS 281
E L SD++SFGV L E+L+
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 136/286 (47%), Gaps = 43/286 (15%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGML-IAVKRLNQEGF--QGHKEWLTEINYLG 133
+ V+G G FG V G + PG L +A+K L + G+ + +++L E + +G
Sbjct: 27 ERVIGAGEFGEVCSGRL-------KLPGKRELPVAIKTL-KVGYTEKQRRDFLGEASIMG 78
Query: 134 QLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAAN 193
Q HPN++ L G + ++V E+M GS++ L + F + ++ G +
Sbjct: 79 QFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR---GISA 135
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVMGTY 250
G+ +L ++ ++RD A NIL++SN K+SDFGL+R D P + ++
Sbjct: 136 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PI 191
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-TSKR 309
+ APE +A T+ SD++S+G+V+ E++S GE +PY + +
Sbjct: 192 RWTAPEAIAFRKFTSASDVWSYGIVMWEVVS----------YGE-------RPYWEMTNQ 234
Query: 310 RIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+ + ++ RL P A L L C E RP DE+V
Sbjct: 235 DVIKAVEEGYRLPSPMDCPAA--LYQLMLDCWQKERNSRPKFDEIV 278
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE-GFQGHKEWLTEINYLGQLHHP 138
LGEG FG V + T GTG ++AVK L + G Q W EI L L+H
Sbjct: 16 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 139 NLVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
++VK G C + + LV E++P GS+ ++L R L + A G+A
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMA 125
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH-VSTRVMGTYGYAAP 255
+LH+ I+R A N+LLD++ K+ DFGLA+ P G + + V + AP
Sbjct: 126 YLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 183
Query: 256 EYLATGHLTAKSDIYSFGVVLLEILS 281
E L SD++SFGV L E+L+
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHP 138
LG+G FG V++G + P T +A+K +N+ + E+L E + + + +
Sbjct: 27 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHL------FRRGSYFQPLSWSLRMKIALGAA 192
++V+L+G + L++ E M RG ++++L P S S +++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
+G+A+L++ K ++RD A N ++ ++ K+ DFG+ RD D + + +
Sbjct: 143 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 200
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEI 279
+PE L G T SD++SFGVVL EI
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 139/304 (45%), Gaps = 43/304 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 228 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 277
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q +S + + +A ++ + +L
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+R+ A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 336 --KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLA 392
Query: 260 TGHLTAKSDIYSFGVVLLEI----LSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVL 315
+ KSD+++FGV+L EI +S ID + +++ +L
Sbjct: 393 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYELL 432
Query: 316 --DPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVKXXXXXXXXRNMHKRPQKEH 373
D R+E P +K L C P RP E+ + ++ +KE
Sbjct: 433 EKDYRMERPEGCP--EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 490
Query: 374 QAKG 377
+G
Sbjct: 491 GKRG 494
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 30/225 (13%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINY 131
+ + V+GEG FG V K + + G M A+KR+ + + H+++ E+
Sbjct: 16 DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 68
Query: 132 LGQL-HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR------------GSYFQP 178
L +L HHPN++ L+G C + L E+ P G++ + L + S
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 179 LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGD 238
LS + A A G+ +L ++ + I+RD A NIL+ NY AK++DFGL+R G
Sbjct: 129 LSSQQLLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQ 182
Query: 239 KSHVSTRVMGT--YGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ +V + MG + A E L T SD++S+GV+L EI+S
Sbjct: 183 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 30/225 (13%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINY 131
+ + V+GEG FG V K + + G M A+KR+ + + H+++ E+
Sbjct: 26 DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 78
Query: 132 LGQL-HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR------------GSYFQP 178
L +L HHPN++ L+G C + L E+ P G++ + L + S
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 179 LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGD 238
LS + A A G+ +L ++ + I+RD A NIL+ NY AK++DFGL+R G
Sbjct: 139 LSSQQLLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQ 192
Query: 239 KSHVSTRVMGT--YGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ +V + MG + A E L T SD++S+GV+L EI+S
Sbjct: 193 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V+ G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 40 LGGGQYGEVYVGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 89
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + +V E+MP G++ ++L R + ++ + + +A ++ + +L
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVLLYMATQISSAMEYLE 147
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 148 --KKNFIHRDLAARNCLVGENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 204
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 205 YNTFSIKSDVWAFGVLLWEI 224
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 19/239 (7%)
Query: 54 LQSSNIKNFSYSDL------RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGM 107
+ S N + FS +D+ A LG+G FG V++G + P T
Sbjct: 1 MASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVA--KGVVKDEPETR- 57
Query: 108 LIAVKRLNQEGFQGHK-EWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSME 166
+A+K +N+ + E+L E + + + + ++V+L+G + L++ E M RG ++
Sbjct: 58 -VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 116
Query: 167 NHL------FRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSN 220
++L P S S +++A A+G+A+L++ K ++RD A N ++ +
Sbjct: 117 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAED 174
Query: 221 YNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEI 279
+ K+ DFG+ RD D + + + +PE L G T SD++SFGVVL EI
Sbjct: 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 114/213 (53%), Gaps = 23/213 (10%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGT-GMLIAVKRLNQEGF--QGHKEWLTEINYLG 133
+ V+G G FG V G + PG + +A+K L + G+ + +++L+E + +G
Sbjct: 12 EQVIGAGEFGEVCSGHL-------KLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMG 63
Query: 134 QLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAAN 193
Q HPN++ L G + +++ EFM GS+++ L + F + ++ G A
Sbjct: 64 QFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAA 120
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR--DGPTGDKSHVSTRVMG--- 248
G+ +L A+ ++R A NIL++SN K+SDFGL+R + T D ++ T +G
Sbjct: 121 GMKYL--ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY--TSALGGKI 176
Query: 249 TYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T+ SD++S+G+V+ E++S
Sbjct: 177 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 19/242 (7%)
Query: 51 GEILQSSNIKNFSYSDL------RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPG 104
G + S N + FS +D+ A LG+G FG V++G + P
Sbjct: 20 GVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVA--KGVVKDEPE 77
Query: 105 TGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRG 163
T +A+K +N+ + E+L E + + + + ++V+L+G + L++ E M RG
Sbjct: 78 TR--VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 135
Query: 164 SMENHL------FRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILL 217
++++L P S S +++A A+G+A+L++ K ++RD A N ++
Sbjct: 136 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMV 193
Query: 218 DSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLL 277
++ K+ DFG+ RD D + + + +PE L G T SD++SFGVVL
Sbjct: 194 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 253
Query: 278 EI 279
EI
Sbjct: 254 EI 255
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 108/202 (53%), Gaps = 15/202 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 267 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 316
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 374
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+R+ A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 375 --KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLA 431
Query: 260 TGHLTAKSDIYSFGVVLLEILS 281
+ KSD+++FGV+L EI +
Sbjct: 432 YNKFSIKSDVWAFGVLLWEIAT 453
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 19/239 (7%)
Query: 54 LQSSNIKNFSYSDL------RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGM 107
+ S N + FS +D+ A LG+G FG V++G + P T
Sbjct: 1 MASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVA--KGVVKDEPETR- 57
Query: 108 LIAVKRLNQEGFQGHK-EWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSME 166
+A+K +N+ + E+L E + + + + ++V+L+G + L++ E M RG ++
Sbjct: 58 -VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 116
Query: 167 NHL------FRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSN 220
++L P S S +++A A+G+A+L++ K ++RD A N ++ +
Sbjct: 117 SYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMVAED 174
Query: 221 YNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEI 279
+ K+ DFG+ RD D + + + +PE L G T SD++SFGVVL EI
Sbjct: 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHP 138
LG+G FG V++G + P T +A+K +N+ + E+L E + + + +
Sbjct: 26 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHL------FRRGSYFQPLSWSLRMKIALGAA 192
++V+L+G + L++ E M RG ++++L P S S +++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
+G+A+L++ K ++RD A N ++ ++ K+ DFG+ RD D + + +
Sbjct: 142 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEI 279
+PE L G T SD++SFGVVL EI
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G +G V++G ++SL +AVK L ++ + +E+L E + ++ HPN
Sbjct: 225 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 274
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L+G C + ++ EFM G++ ++L R Q ++ + + +A ++ + +L
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLE 332
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+R+ A N L+ N+ K++DFGL+R TGD + APE LA
Sbjct: 333 --KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLA 389
Query: 260 TGHLTAKSDIYSFGVVLLEI 279
+ KSD+++FGV+L EI
Sbjct: 390 YNKFSIKSDVWAFGVLLWEI 409
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHP 138
LG+G FG V++G + P T +A+K +N+ + E+L E + + + +
Sbjct: 24 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 79
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHL------FRRGSYFQPLSWSLRMKIALGAA 192
++V+L+G + L++ E M RG ++++L P S S +++A A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
+G+A+L++ K ++RD A N ++ ++ K+ DFG+ RD D + + +
Sbjct: 140 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEI 279
+PE L G T SD++SFGVVL EI
Sbjct: 198 MSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHP 138
LG+G FG V++G + P T +A+K +N+ + E+L E + + + +
Sbjct: 20 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHL------FRRGSYFQPLSWSLRMKIALGAA 192
++V+L+G + L++ E M RG ++++L P S S +++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
+G+A+L++ K ++RD A N ++ ++ K+ DFG+ RD D + + +
Sbjct: 136 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 193
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEI 279
+PE L G T SD++SFGVVL EI
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 22/209 (10%)
Query: 79 VLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQE-GFQGHKEWLTEINYLGQLH 136
VLG G FG+V+KG WV E + +A+K LN+ G + + E++ E + +
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVK------IPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMKIALGAA 192
HP+LV+L+G CL +L V + MP G + ++ GS L+W +++ A
Sbjct: 99 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLL-LNWCVQI------A 150
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
G+ +L E ++++RD A N+L+ S + K++DFGLAR +K + + +
Sbjct: 151 KGMMYLE--ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 208
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
A E + T +SD++S+GV + E+++
Sbjct: 209 MALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHP 138
LG+G FG V++G + P T +A+K +N+ + E+L E + + + +
Sbjct: 26 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHL------FRRGSYFQPLSWSLRMKIALGAA 192
++V+L+G + L++ E M RG ++++L P S S +++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
+G+A+L++ K ++RD A N ++ ++ K+ DFG+ RD D + + +
Sbjct: 142 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEI 279
+PE L G T SD++SFGVVL EI
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 139/317 (43%), Gaps = 44/317 (13%)
Query: 43 LPQTPRSEGEILQSSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTR 102
LP P + E +S KN + A +F LG+G FG+V+ LA +
Sbjct: 5 LPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVY--------LAREK 56
Query: 103 PGTGMLIAVKRLNQEGFQG---HKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEF 159
+ ++A+K L + + + E+ L HPN+++L GY + L+ E+
Sbjct: 57 -QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 115
Query: 160 MPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS 219
P G++ L + + + + + ++A N L++ HS +VI+RD K N+LL S
Sbjct: 116 APLGTVYRELQKLSKFDEQRTATYITELA----NALSYCHSK--RVIHRDIKPENLLLGS 169
Query: 220 NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEI 279
K++DFG + P+ + T + GT Y PE + K D++S GV+ E
Sbjct: 170 AGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 225
Query: 280 LSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQ 337
L G+ + N Y + +RI RV +F+ P + A L +
Sbjct: 226 LVGKPPFEANT-------------YQETYKRISRV-------EFTFPDFVTEGARDLISR 265
Query: 338 CLSVEPKLRPDMDEVVK 354
L P RP + EV++
Sbjct: 266 LLKHNPSQRPMLREVLE 282
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHP 138
LG+G FG V++G + P T +A+K +N+ + E+L E + + + +
Sbjct: 27 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHL------FRRGSYFQPLSWSLRMKIALGAA 192
++V+L+G + L++ E M RG ++++L P S S +++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
+G+A+L++ K ++RD A N ++ ++ K+ DFG+ RD D + + +
Sbjct: 143 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 200
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEI 279
+PE L G T SD++SFGVVL EI
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 133/286 (46%), Gaps = 39/286 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHP 138
LG+G FG V++G + P T +A+K +N+ + E+L E + + + +
Sbjct: 20 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHL------FRRGSYFQPLSWSLRMKIALGAA 192
++V+L+G + L++ E M RG ++++L P S S +++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
+G+A+L++ K ++RD A N + ++ K+ DFG+ RD D + + +
Sbjct: 136 DGMAYLNAN--KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 193
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-TSKRRI 311
+PE L G T SD++SFGVVL EI + L E +PY S ++
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAE--QPYQGLSNEQV 236
Query: 312 FRVLDPRLEGQFSLPQAQKAASLALQ----CLSVEPKLRPDMDEVV 353
R + +EG L + + L+ C PK+RP E++
Sbjct: 237 LRFV---MEGGL-LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 112/225 (49%), Gaps = 30/225 (13%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINY 131
+ + V+GEG FG V K + + G M A+KR+ + + H+++ E+
Sbjct: 23 DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 75
Query: 132 LGQL-HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR------------GSYFQP 178
L +L HHPN++ L+G C + L E+ P G++ + L + S
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 179 LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGD 238
LS + A A G+ +L ++ + I+R+ A NIL+ NY AK++DFGL+R G
Sbjct: 136 LSSQQLLHFAADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQ 189
Query: 239 KSHVSTRVMGT--YGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ +V + MG + A E L T SD++S+GV+L EI+S
Sbjct: 190 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHP 138
LG+G FG V++G + P T +A+K +N+ + E+L E + + + +
Sbjct: 23 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHL------FRRGSYFQPLSWSLRMKIALGAA 192
++V+L+G + L++ E M RG ++++L P S S +++A A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
+G+A+L++ K ++RD A N ++ ++ K+ DFG+ RD D + + +
Sbjct: 139 DGMAYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 196
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEI 279
+PE L G T SD++SFGVVL EI
Sbjct: 197 MSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +L E N + QL H
Sbjct: 27 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L ++ ++ E+M GS+ + F + L+ + + +A A G+AF+
Sbjct: 76 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAPEY 257
E I+RD +A+NIL+ + K++DFGLAR + + + R + + APE
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 187
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRR 284
+ G T KSD++SFG++L EI++ R
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +L E N + QL H
Sbjct: 29 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 77
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L ++ ++ E+M GS+ + F + L+ + + +A A G+AF+
Sbjct: 78 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAPEY 257
E I+RD +A+NIL+ + K++DFGLAR + + + R + + APE
Sbjct: 135 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 189
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRR 284
+ G T KSD++SFG++L EI++ R
Sbjct: 190 INYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 22/209 (10%)
Query: 79 VLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQE-GFQGHKEWLTEINYLGQLH 136
VLG G FG+V+KG WV E + +A+K LN+ G + + E++ E + +
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVK------IPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMKIALGAA 192
HP+LV+L+G CL +L V + MP G + ++ GS L+W +++ A
Sbjct: 76 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLL-LNWCVQI------A 127
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
G+ +L E ++++RD A N+L+ S + K++DFGLAR +K + + +
Sbjct: 128 KGMMYLE--ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 185
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
A E + T +SD++S+GV + E+++
Sbjct: 186 MALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +L E N + QL H
Sbjct: 30 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L ++ ++ E+M GS+ + F + L+ + + +A A G+AF+
Sbjct: 79 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAPEY 257
E I+RD +A+NIL+ + K++DFGLAR + + + R + + APE
Sbjct: 136 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 190
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRR 284
+ G T KSD++SFG++L EI++ R
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 113/214 (52%), Gaps = 21/214 (9%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGT-GMLIAVKRLNQEGF--QGHKEWLTEIN 130
+ + V+G G FG V G + PG + +A+K L + G+ + +++L+E +
Sbjct: 16 IKIEKVIGVGEFGEVCSGRL-------KVPGKREICVAIKTL-KAGYTDKQRRDFLSEAS 67
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN++ L G + +++ E+M GS++ L + F + ++ G
Sbjct: 68 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---G 124
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
+G+ +L ++ ++RD A NIL++SN K+SDFG++R D P + ++
Sbjct: 125 IGSGMKYL--SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI- 181
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE +A T+ SD++S+G+V+ E++S
Sbjct: 182 -PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 124/276 (44%), Gaps = 36/276 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLN-QEGFQGHKEWLTEINYLGQLHHP 138
+G+G FG VFKG +D T ++A+K ++ +E ++ EI L Q P
Sbjct: 30 IGKGSFGEVFKG-IDNR--------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
+ K G L+D ++ E++ GS + L G PL + I GL +L
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG----PLDETQIATILREILKGLDYL 135
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
HS K I+RD KA+N+LL + KL+DFG+A G D +GT + APE +
Sbjct: 136 HSE--KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 191
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPR 318
+K+DI+S G+ +E+ G + P L+ P P
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PT 238
Query: 319 LEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
LEG +S P + + CL+ EP RP E++K
Sbjct: 239 LEGNYSKPLKEFVEA----CLNKEPSFRPTAKELLK 270
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGT-GMLIAVKRLNQEGF--QGHKEWLTEIN 130
+ + V+G G FG V G + PG + +A+K L + G+ + +++L E +
Sbjct: 45 IKIERVIGAGEFGEVCSGRL-------KLPGKRDVAVAIKTL-KVGYTEKQRRDFLCEAS 96
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN+V L G ++V EFM G+++ L + F + ++ G
Sbjct: 97 IMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR---G 153
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
A G+ +L A+ ++RD A NIL++SN K+SDFGL+R D P + ++
Sbjct: 154 IAAGMRYL--ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI- 210
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL-T 306
+ APE + T+ SD++S+G+V+ E++S GE +PY
Sbjct: 211 -PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS----------YGE-------RPYWDM 252
Query: 307 SKRRIFRVLDP--RLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
S + + + ++ RL P L L C E RP +++V
Sbjct: 253 SNQDVIKAIEEGYRLPAPMDCPAGLH--QLMLDCWQKERAERPKFEQIV 299
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +L E N + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L ++ ++ E+M GS+ + F + L+ + + +A A G+AF+
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAPEY 257
E I+RD +A+NIL+ + K++DFGLAR + + + R + + APE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 181
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRR 284
+ G T KSD++SFG++L EI++ R
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +L E N + QL H
Sbjct: 31 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 79
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L ++ ++ E+M GS+ + F + L+ + + +A A G+AF+
Sbjct: 80 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAPEY 257
E I+RD +A+NIL+ + K++DFGLAR + + + R + + APE
Sbjct: 137 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 191
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRR 284
+ G T KSD++SFG++L EI++ R
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +L E N + QL H
Sbjct: 27 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L ++ ++ E+M GS+ + F + L+ + + +A A G+AF+
Sbjct: 76 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAPEY 257
E I+RD +A+NIL+ + K++DFGLAR + + + R + + APE
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 187
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRR 284
+ G T KSD++SFG++L EI++ R
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 124/276 (44%), Gaps = 36/276 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLN-QEGFQGHKEWLTEINYLGQLHHP 138
+G+G FG VFKG +D T ++A+K ++ +E ++ EI L Q P
Sbjct: 15 IGKGSFGEVFKG-IDNR--------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
+ K G L+D ++ E++ GS + L G PL + I GL +L
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG----PLDETQIATILREILKGLDYL 120
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
HS K I+RD KA+N+LL + KL+DFG+A G D +GT + APE +
Sbjct: 121 HSE--KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVI 176
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPR 318
+K+DI+S G+ +E+ G + P L+ P P
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PT 223
Query: 319 LEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
LEG +S P + + CL+ EP RP E++K
Sbjct: 224 LEGNYSKPLKEFVEA----CLNKEPSFRPTAKELLK 255
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 124/276 (44%), Gaps = 36/276 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLN-QEGFQGHKEWLTEINYLGQLHHP 138
+G+G FG VFKG +D T ++A+K ++ +E ++ EI L Q P
Sbjct: 15 IGKGSFGEVFKG-IDNR--------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
+ K G L+D ++ E++ GS + L G PL + I GL +L
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG----PLDETQIATILREILKGLDYL 120
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
HS K I+RD KA+N+LL + KL+DFG+A G D +GT + APE +
Sbjct: 121 HSE--KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 176
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPR 318
+K+DI+S G+ +E+ G + P L+ P P
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PT 223
Query: 319 LEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
LEG +S P + + CL+ EP RP E++K
Sbjct: 224 LEGNYSKPLKEFVEA----CLNKEPSFRPTAKELLK 255
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +L E N + QL H
Sbjct: 23 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 71
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L ++ ++ E+M GS+ + F + L+ + + +A A G+AF+
Sbjct: 72 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAPEY 257
E I+RD +A+NIL+ + K++DFGLAR + + + R + + APE
Sbjct: 129 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 183
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRR 284
+ G T KSD++SFG++L EI++ R
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +L E N + QL H
Sbjct: 26 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 74
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L ++ ++ E+M GS+ + F + L+ + + +A A G+AF+
Sbjct: 75 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAPEY 257
E I+RD +A+NIL+ + K++DFGLAR + + + R + + APE
Sbjct: 132 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 186
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRR 284
+ G T KSD++SFG++L EI++ R
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +L E N + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L ++ ++ E+M GS+ + F + L+ + + +A A G+AF+
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAPEY 257
E I+RD +A+NIL+ + K++DFGLAR + + + R + + APE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 181
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRR 284
+ G T KSD++SFG++L EI++ R
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 113/214 (52%), Gaps = 21/214 (9%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGT-GMLIAVKRLNQEGF--QGHKEWLTEIN 130
+ + V+G G FG V G + PG + +A+K L + G+ + +++L+E +
Sbjct: 10 IKIEKVIGVGEFGEVCSGRL-------KVPGKREICVAIKTL-KAGYTDKQRRDFLSEAS 61
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+GQ HPN++ L G + +++ E+M GS++ L + F + ++ G
Sbjct: 62 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---G 118
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---DGPTGDKSHVSTRVM 247
+G+ +L ++ ++RD A NIL++SN K+SDFG++R D P + ++
Sbjct: 119 IGSGMKYL--SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI- 175
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE +A T+ SD++S+G+V+ E++S
Sbjct: 176 -PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +L E N + QL H
Sbjct: 22 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 70
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L ++ ++ E+M GS+ + F + L+ + + +A A G+AF+
Sbjct: 71 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAPEY 257
E I+RD +A+NIL+ + K++DFGLAR + + + R + + APE
Sbjct: 128 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 182
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRR 284
+ G T KSD++SFG++L EI++ R
Sbjct: 183 INYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +L E N + QL H
Sbjct: 16 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 64
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L ++ ++ E+M GS+ + F + L+ + + +A A G+AF+
Sbjct: 65 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAPEY 257
E I+RD +A+NIL+ + K++DFGLAR + + + R + + APE
Sbjct: 122 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 176
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRR 284
+ G T KSD++SFG++L EI++ R
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 25/206 (12%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
LG G FG V G W ++ +A ++ +EG E+ E + +L HP
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAV------------KMIKEGSMSEDEFFQEAQTMMKLSHP 63
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LVK G C ++ +V E++ G + N+L G +P S +++ G+AFL
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFL 120
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT---YGYAAP 255
S + I+RD A N L+D + K+SDFG+ R D +VS+ +GT ++AP
Sbjct: 121 ESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTR--YVLDDQYVSS--VGTKFPVKWSAP 174
Query: 256 EYLATGHLTAKSDIYSFGVVLLEILS 281
E ++KSD+++FG+++ E+ S
Sbjct: 175 EVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 104/211 (49%), Gaps = 24/211 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRP---GTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
LGEG FG V L P TG +AVK L E H + EI L L
Sbjct: 29 LGEGHFGKV--------ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL 80
Query: 136 HHPNLVKLVGYCLED--DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAAN 193
+H N+VK G C ED + L+ EF+P GS++ +L + + ++ ++K A+
Sbjct: 81 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQICK 137
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVST---RVMGTY 250
G+ +L S + ++RD A N+L++S + K+ DFGL + T DK + R +
Sbjct: 138 GMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAIET-DKEXXTVKDDRDSPVF 194
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
Y APE L SD++SFGV L E+L+
Sbjct: 195 WY-APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 41/287 (14%)
Query: 80 LGEGGFGSVFKGWVDE--HSLASTRPGTGMLIAVKRLNQEG-FQGHKEWLTEINYLGQLH 136
LG+G FG V++G + A TR +AVK +N+ + E+L E + +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETR------VAVKTVNESASLRERIEFLNEASVMKGFT 75
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQ------PLSWSLRMKIALG 190
++V+L+G + L+V E M G ++++L + P + +++A
Sbjct: 76 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
A+G+A+L++ K ++RD A N ++ ++ K+ DFG+ RD D + +
Sbjct: 136 IADGMAYLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 193
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPY--LTSK 308
+ APE L G T SD++SFGVVL EI S L E +PY L+++
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNE 236
Query: 309 RRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVV 353
+ + V+D G P ++ L C PK+RP E+V
Sbjct: 237 QVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 280
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 99/178 (55%), Gaps = 13/178 (7%)
Query: 109 IAVKRLNQEGF--QGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSME 166
+A+K L + G+ + +++L+E + +GQ HPN+++L G ++V E+M GS++
Sbjct: 80 VAIKAL-KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 167 NHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLS 226
L F + ++ G G+ +L ++ ++RD A N+L+DSN K+S
Sbjct: 139 TFLRTHDGQFTIMQLVGMLR---GVGAGMRYL--SDLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 227 DFGLAR---DGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
DFGL+R D P D ++ +T + APE +A ++ SD++SFGVV+ E+L+
Sbjct: 194 DFGLSRVLEDDP--DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +L E N + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L ++ ++ E+M GS+ + F + L+ + + +A A G+AF+
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAPEY 257
E I+RD +A+NIL+ + K++DFGLAR + + + R + + APE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 181
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRR 284
+ G T KSD++SFG++L EI++ R
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 124/276 (44%), Gaps = 36/276 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLN-QEGFQGHKEWLTEINYLGQLHHP 138
+G+G FG VFKG +D T ++A+K ++ +E ++ EI L Q P
Sbjct: 35 IGKGSFGEVFKG-IDNR--------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 85
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
+ K G L+D ++ E++ GS + L G PL + I GL +L
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG----PLDETQIATILREILKGLDYL 140
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
HS K I+RD KA+N+LL + KL+DFG+A G D +GT + APE +
Sbjct: 141 HSE--KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVI 196
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPR 318
+K+DI+S G+ +E+ G + P L+ P P
Sbjct: 197 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PT 243
Query: 319 LEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
LEG +S P + + CL+ EP RP E++K
Sbjct: 244 LEGNYSKPLKEFVEA----CLNKEPSFRPTAKELLK 275
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 104/211 (49%), Gaps = 24/211 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRP---GTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
LGEG FG V L P TG +AVK L E H + EI L L
Sbjct: 17 LGEGHFGKV--------ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL 68
Query: 136 HHPNLVKLVGYCLED--DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAAN 193
+H N+VK G C ED + L+ EF+P GS++ +L + + ++ ++K A+
Sbjct: 69 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQICK 125
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVST---RVMGTY 250
G+ +L S + ++RD A N+L++S + K+ DFGL + T DK + R +
Sbjct: 126 GMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAIET-DKEXXTVKDDRDSPVF 182
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
Y APE L SD++SFGV L E+L+
Sbjct: 183 WY-APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 41/287 (14%)
Query: 80 LGEGGFGSVFKGWVDE--HSLASTRPGTGMLIAVKRLNQEG-FQGHKEWLTEINYLGQLH 136
LG+G FG V++G + A TR +AVK +N+ + E+L E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR------VAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQ------PLSWSLRMKIALG 190
++V+L+G + L+V E M G ++++L + P + +++A
Sbjct: 79 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
A+G+A+L++ K ++RD A N ++ ++ K+ DFG+ RD D + +
Sbjct: 139 IADGMAYLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPY--LTSK 308
+ APE L G T SD++SFGVVL EI S L E +PY L+++
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNE 239
Query: 309 RRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVV 353
+ + V+D G P ++ L C PK+RP E+V
Sbjct: 240 QVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 138/317 (43%), Gaps = 44/317 (13%)
Query: 43 LPQTPRSEGEILQSSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTR 102
LP P + E +S KN + A +F LG+G FG+V+ LA +
Sbjct: 5 LPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVY--------LAREK 56
Query: 103 PGTGMLIAVKRLNQEGFQG---HKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEF 159
+ ++A+K L + + + E+ L HPN+++L GY + L+ E+
Sbjct: 57 -QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 115
Query: 160 MPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS 219
P G++ L + + + + + ++ AN L++ HS +VI+RD K N+LL S
Sbjct: 116 APLGTVYRELQKLSKFDEQRTATYITEL----ANALSYCHSK--RVIHRDIKPENLLLGS 169
Query: 220 NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEI 279
K++DFG + P+ + + GT Y PE + K D++S GV+ E
Sbjct: 170 AGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 225
Query: 280 LSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQ 337
L G+ + N Y + +RI RV +F+ P + A L +
Sbjct: 226 LVGKPPFEANT-------------YQETYKRISRV-------EFTFPDFVTEGARDLISR 265
Query: 338 CLSVEPKLRPDMDEVVK 354
L P RP + EV++
Sbjct: 266 LLKHNPSQRPMLREVLE 282
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ SM+ F S + L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSY 111
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LGEG +GSV+K E TG ++A+K++ E +E + EI+ + Q P+
Sbjct: 37 LGEGSYGSVYKAIHKE---------TGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPH 85
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+VK G ++ +V E+ GS+ + + R + L+ I GL +LH
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLH 142
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ I+RD KA NILL++ +AKL+DFG+A G D V+GT + APE +
Sbjct: 143 FM--RKIHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQ 198
Query: 260 TGHLTAKSDIYSFGVVLLEILSGR 283
+DI+S G+ +E+ G+
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGK 222
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ SM+ F S + L
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSY 109
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 110 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 98/178 (55%), Gaps = 13/178 (7%)
Query: 109 IAVKRLNQEGF--QGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSME 166
+A+K L + G+ + +++L+E + +GQ HPN+++L G ++V E+M GS++
Sbjct: 80 VAIKAL-KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 167 NHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLS 226
L F + ++ G G+ +L ++ ++RD A N+L+DSN K+S
Sbjct: 139 TFLRTHDGQFTIMQLVGMLR---GVGAGMRYL--SDLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 227 DFGLAR---DGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
DFGL+R D P D + +T + APE +A ++ SD++SFGVV+ E+L+
Sbjct: 194 DFGLSRVLEDDP--DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 124/291 (42%), Gaps = 55/291 (18%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHP 138
+GEG FG VF+ L P T ++AVK L +E + ++ E + + +P
Sbjct: 55 IGEGAFGRVFQA--RAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRG-------SMENHLFRRGSYFQ-------------P 178
N+VKL+G C L++E+M G SM H S+ P
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 179 LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGD 238
LS + ++ IA A G+A+L +E K ++RD N L+ N K++DFGL+R+ + D
Sbjct: 171 LSCAEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 228
Query: 239 KSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS----------------- 281
+ PE + T +SD++++GVVL EI S
Sbjct: 229 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY 288
Query: 282 ----GRRAIDKNRPTGEHNLVE--WAK-----PYLTSKRRIFRVLDPRLEG 321
A +N P +NL+ W+K P S RI + + R EG
Sbjct: 289 VRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEG 339
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTE---- 128
N + LG G FG V V+ + + + +AVK L KE L
Sbjct: 39 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 129 INYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSY------FQPLSWS 182
+++LGQ H N+V L+G C L++ E+ G + N L R+ +PL
Sbjct: 95 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 152
Query: 183 LRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHV 242
+ + A G+AFL A I+RD A N+LL + + AK+ DFGLARD V
Sbjct: 153 DLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 210
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++S+G++L EI S
Sbjct: 211 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTE---- 128
N + LG G FG V V+ + + + +AVK L KE L
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 129 INYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSY------FQPLSWS 182
+++LGQ H N+V L+G C L++ E+ G + N L R+ +PL
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 160
Query: 183 LRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHV 242
+ + A G+AFL A I+RD A N+LL + + AK+ DFGLARD V
Sbjct: 161 DLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 218
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++S+G++L EI S
Sbjct: 219 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 21/217 (9%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRP---GTGMLIAVKRLNQEGFQGHKEWLTE 128
R+ + S LG+G FGSV L P TG L+AVK+L G +++ E
Sbjct: 10 RHLKYISQLGKGNFGSV--------ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 61
Query: 129 INYLGQLHHPNLVKL--VGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
I L LH +VK V Y LV E++P G + + L R + L S +
Sbjct: 62 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLL 118
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+ G+ +L S + ++RD A NIL++S + K++DFGLA+ P DK + R
Sbjct: 119 YSSQICKGMEYLGSR--RCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVRE 175
Query: 247 MGT--YGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
G + APE L+ + +SD++SFGVVL E+ +
Sbjct: 176 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ SM+ F S + L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 111
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 21/217 (9%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRP---GTGMLIAVKRLNQEGFQGHKEWLTE 128
R+ + S LG+G FGSV L P TG L+AVK+L G +++ E
Sbjct: 11 RHLKYISQLGKGNFGSV--------ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 62
Query: 129 INYLGQLHHPNLVKL--VGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
I L LH +VK V Y LV E++P G + + L R + L S +
Sbjct: 63 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLL 119
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+ G+ +L S + ++RD A NIL++S + K++DFGLA+ P DK + R
Sbjct: 120 YSSQICKGMEYLGSR--RCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVRE 176
Query: 247 MGT--YGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
G + APE L+ + +SD++SFGVVL E+ +
Sbjct: 177 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 21 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ EF+P GS+ +L + R + + L ++ ++ G
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQI------CKG 129
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 130 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFW 186
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ SM+ F S + L
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 110
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 111 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 21/217 (9%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRP---GTGMLIAVKRLNQEGFQGHKEWLTE 128
R+ + S LG+G FGSV L P TG L+AVK+L G +++ E
Sbjct: 23 RHLKYISQLGKGNFGSV--------ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 74
Query: 129 INYLGQLHHPNLVKL--VGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
I L LH +VK V Y LV E++P G + + L R + L S +
Sbjct: 75 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLL 131
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+ G+ +L S + ++RD A NIL++S + K++DFGLA+ P DK + R
Sbjct: 132 YSSQICKGMEYLGSR--RCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVRE 188
Query: 247 MGT--YGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
G + APE L+ + +SD++SFGVVL E+ +
Sbjct: 189 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + H+ +AVK L Q G +L E N + QL H
Sbjct: 17 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 65
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L ++ ++ E+M GS+ + F + L+ + + +A A G+AF+
Sbjct: 66 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAPEY 257
E I+R+ +A+NIL+ + K++DFGLAR + + + R + + APE
Sbjct: 123 --ERNYIHRNLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 177
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRR 284
+ G T KSD++SFG++L EI++ R
Sbjct: 178 INYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 37/285 (12%)
Query: 80 LGEGGFGSVFKGWVDE--HSLASTRPGTGMLIAVKRLNQEG-FQGHKEWLTEINYLGQLH 136
LG+G FG V++G + A TR +AVK +N+ + E+L E + +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETR------VAVKTVNESASLRERIEFLNEASVMKGFT 77
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQ------PLSWSLRMKIALG 190
++V+L+G + L+V E M G ++++L + P + +++A
Sbjct: 78 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
A+G+A+L++ K ++RD A N ++ ++ K+ DFG+ RD D + +
Sbjct: 138 IADGMAYLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ APE L G T SD++SFGVVL EI S L E L++++
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 240
Query: 311 IFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVV 353
+ V+D G P ++ L C PK+RP E+V
Sbjct: 241 LKFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 17 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L + R + + L ++ ++ G
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKG 125
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 126 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFW 182
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 183 YAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 124/276 (44%), Gaps = 36/276 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLN-QEGFQGHKEWLTEINYLGQLHHP 138
+G+G FG V+KG +D H T ++A+K ++ +E ++ EI L Q P
Sbjct: 27 IGKGSFGEVYKG-IDNH--------TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
+ + G L+ ++ E++ GS + L + G PL + I GL +L
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPG----PLEETYIATILREILKGLDYL 132
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
HS + I+RD KA+N+LL + KL+DFG+A G D +GT + APE +
Sbjct: 133 HSE--RKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 188
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPR 318
K+DI+S G+ +E+ G P L+ P P
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------------PT 235
Query: 319 LEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
LEGQ S P + + CL+ +P+ RP E++K
Sbjct: 236 LEGQHSKPFKEFVEA----CLNKDPRFRPTAKELLK 267
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 16 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L + R + + L ++ ++ G
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKG 124
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 125 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFW 181
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 21 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L + R + + L ++ ++ G
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKG 129
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 130 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFW 186
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 22 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L + R + + L ++ ++ G
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKG 130
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 131 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFW 187
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 188 YAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 18 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L + R + + L ++ ++ G
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKG 126
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 127 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFW 183
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 41/287 (14%)
Query: 80 LGEGGFGSVFKGWVDE--HSLASTRPGTGMLIAVKRLNQEG-FQGHKEWLTEINYLGQLH 136
LG+G FG V++G + A TR +AVK +N+ + E+L E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR------VAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQ------PLSWSLRMKIALG 190
++V+L+G + L+V E M G ++++L + P + +++A
Sbjct: 79 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
A+G+A+L++ K ++RD A N ++ ++ K+ DFG+ RD D + +
Sbjct: 139 IADGMAYLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPY--LTSK 308
+ APE L G T SD++SFGVVL EI S L E +PY L+++
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNE 239
Query: 309 RRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVV 353
+ + V+D G P ++ L C P +RP E+V
Sbjct: 240 QVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 23 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L + R + + L ++ ++ G
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKG 131
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 132 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFW 188
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 189 YAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 106/217 (48%), Gaps = 21/217 (9%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRP---GTGMLIAVKRLNQEGFQGHKEWLTE 128
R+ + S LG+G FGSV L P TG L+AVK+L G +++ E
Sbjct: 7 RHLKYISQLGKGNFGSV--------ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 58
Query: 129 INYLGQLHHPNLVKL--VGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
I L LH +VK V Y LV E++P G + + L R + L S +
Sbjct: 59 IQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLL 115
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+ G+ +L S + ++RD A NIL++S + K++DFGLA+ P DK R
Sbjct: 116 YSSQICKGMEYLGSR--RCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDXXVVRE 172
Query: 247 MGT--YGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
G + APE L+ + +SD++SFGVVL E+ +
Sbjct: 173 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 24 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L + R + + L ++ ++ G
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKG 132
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 133 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFW 189
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 190 YAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 18 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L + R + + L ++ ++ G
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKG 126
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 127 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFW 183
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 49 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L + R + + L ++ ++ G
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKG 157
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 158 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFW 214
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 41/287 (14%)
Query: 80 LGEGGFGSVFKGWVDE--HSLASTRPGTGMLIAVKRLNQEG-FQGHKEWLTEINYLGQLH 136
LG+G FG V++G + A TR +AVK +N+ + E+L E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR------VAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQ------PLSWSLRMKIALG 190
++V+L+G + L+V E M G ++++L + P + +++A
Sbjct: 79 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
A+G+A+L++ K ++RD A N ++ ++ K+ DFG+ RD D + +
Sbjct: 139 IADGMAYLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPY--LTSK 308
+ APE L G T SD++SFGVVL EI S L E +PY L+++
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNE 239
Query: 309 RRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVV 353
+ + V+D G P ++ L C PK+RP E+V
Sbjct: 240 QVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 25 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L + R + + L ++ ++ G
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKG 133
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 134 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFW 190
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 191 YAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 18 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L + R + + L ++ ++ G
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKG 126
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 127 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFFKVKEPGESPIFW 183
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 27/207 (13%)
Query: 80 LGEGGFGSVFKGWVDEHS---LASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
LG G FG V+ ++H+ + + +PG+ ++ E F L E N + L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGS--------MSVEAF------LAEANVMKTLQ 68
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H LVKL + + ++ EFM +GS+ + L QPL + + A G+A
Sbjct: 69 HDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMA 125
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAA 254
F+ + I+RD +A+NIL+ ++ K++DFGLAR + + + R + + A
Sbjct: 126 FIE--QRNYIHRDLRAANILVSASLVCKIADFGLAR---VIEDNEYTAREGAKFPIKWTA 180
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILS 281
PE + G T KSD++SFG++L+EI++
Sbjct: 181 PEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ PRG + L + + + + + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+ AN L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 122 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 171
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 218
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 219 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 36 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L + R + + L ++ ++ G
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKG 144
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 145 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFW 201
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 100/223 (44%), Gaps = 22/223 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTE---- 128
N + LG G FG V V+ + + + +AVK L KE L
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 129 INYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQP---------- 178
+++LGQ H N+V L+G C L++ E+ G + N L R+ +
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 179 LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGD 238
LS + + A G+AFL A I+RD A N+LL + + AK+ DFGLARD
Sbjct: 161 LSTRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 239 KSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
V + APE + T +SD++S+G++L EI S
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G G V+ G+ + H+ +AVK L Q G +L E N + QL H
Sbjct: 21 LGAGQAGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV+L ++ ++ E+M GS+ + F + L+ + + +A A G+AF+
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAPEY 257
E I+RD +A+NIL+ + K++DFGLAR + + + R + + APE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDAEXTAREGAKFPIKWTAPEA 181
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRR 284
+ G T KSD++SFG++L EI++ R
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 80 LGEGGFGSVFKGWVDEHS---LASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
LG G FG V+ ++H+ + + +PG+ ++ E F L E N + L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGS--------MSVEAF------LAEANVMKTLQ 235
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H LVKL + + ++ EFM +GS+ + L QPL + + A G+A
Sbjct: 236 HDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMA 292
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
F+ + I+RD +A+NIL+ ++ K++DFGLAR G K + + APE
Sbjct: 293 FIE--QRNYIHRDLRAANILVSASLVCKIADFGLAR---VGAKFPIK--------WTAPE 339
Query: 257 YLATGHLTAKSDIYSFGVVLLEILS 281
+ G T KSD++SFG++L+EI++
Sbjct: 340 AINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 36 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L + R + + L ++ ++ G
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKG 144
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 145 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFW 201
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE-WLTEINYLGQLHH 137
+LGEG FG V++G H G + +AVK ++ +KE +++E + L H
Sbjct: 15 ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 68
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P++VKL+G +E++ ++ E P G + ++L R + + L+ L +L +A+
Sbjct: 69 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY---SLQICKAMAY 124
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L S ++RD NIL+ S KL DFGL+R D S + + +PE
Sbjct: 125 LESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPES 181
Query: 258 LATGHLTAKSDIYSFGVVLLEILS 281
+ T SD++ F V + EILS
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILS 205
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 21 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHL---FRRGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L R + + L ++ ++ G
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI------CKG 129
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+RD NIL+++ K+ DFGL + P DK + G +
Sbjct: 130 MEYLGTK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFW 186
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE-WLTEINYLGQLHH 137
+LGEG FG V++G H G + +AVK ++ +KE +++E + L H
Sbjct: 31 ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 84
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P++VKL+G +E++ ++ E P G + ++L R + + L+ L +L +A+
Sbjct: 85 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY---SLQICKAMAY 140
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L S ++RD NIL+ S KL DFGL+R D S + + +PE
Sbjct: 141 LESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPES 197
Query: 258 LATGHLTAKSDIYSFGVVLLEILS 281
+ T SD++ F V + EILS
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILS 221
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 117/241 (48%), Gaps = 18/241 (7%)
Query: 45 QTPRSEGEILQSSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPG 104
Q + EG + + S + + +F VLG+G FG VF TRP
Sbjct: 1 QPSKDEGVLKEISITHHVKAGSEKADPSHFELLKVLGQGSFGKVFL------VRKVTRPD 54
Query: 105 TGMLIAVKRLNQEGFQGHKEWLTEI--NYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMP 161
+G L A+K L + + T++ + L ++HP +VKL Y + + +L L+ +F+
Sbjct: 55 SGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL-HYAFQTEGKLYLILDFLR 113
Query: 162 RGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNY 221
G + L + + + ++ALG L LHS +IYRD K NILLD
Sbjct: 114 GGDLFTRLSKEVMFTEEDVKFYLAELALG----LDHLHSL--GIIYRDLKPENILLDEEG 167
Query: 222 NAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ KL+DFGL+++ +K S GT Y APE + + +D +S+GV++ E+L+
Sbjct: 168 HIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLT 225
Query: 282 G 282
G
Sbjct: 226 G 226
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 21/209 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G FGSV D + TG ++AVK+L + +++ EI L L H N
Sbjct: 19 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 140 LVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFR---RGSYFQPLSWSLRMKIALGAANG 194
+VK G C R L+ E++P GS+ ++L + R + + L ++ ++ G
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKG 127
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT--YGY 252
+ +L + + I+R+ NIL+++ K+ DFGL + P DK + + G +
Sbjct: 128 MEYLGTK--RYIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYYKVKEPGESPIFW 184
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILS 281
APE L + SD++SFGVVL E+ +
Sbjct: 185 YAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + + +P + +AVK L + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR------GSY------FQPLSWSLRM 185
N++ L+G C +D ++ E+ +G++ +L R SY + +++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A G+ +L S K I+RD A N+L+ N K++DFGLARD D +T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV++ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 27/207 (13%)
Query: 80 LGEGGFGSVFKGWVDEHS---LASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
LG G FG V+ ++H+ + + +PG+ ++ E F L E N + L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGS--------MSVEAF------LAEANVMKTLQ 241
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H LVKL + + ++ EFM +GS+ + L QPL + + A G+A
Sbjct: 242 HDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMA 298
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAA 254
F+ + I+RD +A+NIL+ ++ K++DFGLAR + + + R + + A
Sbjct: 299 FIE--QRNYIHRDLRAANILVSASLVCKIADFGLAR---VIEDNEYTAREGAKFPIKWTA 353
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILS 281
PE + G T KSD++SFG++L+EI++
Sbjct: 354 PEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 25/208 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+G+G FG V G G +AVK + + + +L E + + QL H N
Sbjct: 201 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 247
Query: 140 LVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L+G +E+ L +V E+M +GS+ ++L RG L +K +L + +L
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYL 305
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGP-TGDKSHVSTRVMGTYGYAAPEY 257
++RD A N+L+ + AK+SDFGL ++ T D + + + APE
Sbjct: 306 EGN--NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEA 357
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRRA 285
L + KSD++SFG++L EI S R
Sbjct: 358 LREKKFSTKSDVWSFGILLWEIYSFGRV 385
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE-WLTEINYLGQLHH 137
+LGEG FG V++G H G + +AVK ++ +KE +++E + L H
Sbjct: 19 ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 72
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P++VKL+G +E++ ++ E P G + ++L R + + L+ L +L +A+
Sbjct: 73 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY---SLQICKAMAY 128
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L S ++RD NIL+ S KL DFGL+R D S + + +PE
Sbjct: 129 LESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPES 185
Query: 258 LATGHLTAKSDIYSFGVVLLEILS 281
+ T SD++ F V + EILS
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILS 209
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + + +P + +AVK L + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR------------M 185
N++ L+G C +D ++ E+ +G++ +L R S+ + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A G+ +L S K I+RD A N+L+ N K++DFGLARD D +T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV++ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL-TEIN 130
N VLG G FG V ++ + ++ G + +AVK L ++ +E L +E+
Sbjct: 45 ENLEFGKVLGSGAFGKV----MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 131 YLGQL-HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQP----------- 178
+ QL H N+V L+G C L++E+ G + N+L + F
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 179 --------LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGL 230
L++ + A A G+ FL ++RD A N+L+ K+ DFGL
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGL 218
Query: 231 ARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
ARD + V + APE L G T KSD++S+G++L EI S
Sbjct: 219 ARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF---QGHKEWLTE 128
++ R LG+G FG V +G D S G + +AVK L + + +++ E
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 129 INYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIA 188
+N + L H NL++L G L ++ V E P GS+ + L + +F + S + A
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS---RYA 121
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
+ A G+ +L S + I+RD A N+LL + K+ DFGL R P D +V
Sbjct: 122 VQVAEGMGYLESK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 249 T-YGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ + APE L T + SD + FGV L E+ +
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 44/304 (14%)
Query: 56 SSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLN 115
+S KN + A +F LG+G FG+V+ LA + + ++A+K L
Sbjct: 9 ASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLF 59
Query: 116 QEGFQG---HKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR 172
+ + + E+ L HPN+++L GY + L+ E+ P G++ L +
Sbjct: 60 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 119
Query: 173 GSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR 232
+ + + + ++A N L++ HS +VI+RD K N+LL S K++DFG +
Sbjct: 120 SKFDEQRTATYITELA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV 173
Query: 233 DGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPT 292
P+ + T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 174 HAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--- 226
Query: 293 GEHNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMD 350
Y + +RI RV +F+ P + A L + L P RP +
Sbjct: 227 ----------TYQETYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLR 269
Query: 351 EVVK 354
EV++
Sbjct: 270 EVLE 273
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 25/208 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+G+G FG V G G +AVK + + + +L E + + QL H N
Sbjct: 20 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 66
Query: 140 LVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L+G +E+ L +V E+M +GS+ ++L RG L +K +L + +L
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYL 124
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGP-TGDKSHVSTRVMGTYGYAAPEY 257
++RD A N+L+ + AK+SDFGL ++ T D + + + APE
Sbjct: 125 EGN--NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEA 176
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRRA 285
L + KSD++SFG++L EI S R
Sbjct: 177 LREAAFSTKSDVWSFGILLWEIYSFGRV 204
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 25/208 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+G+G FG V G G +AVK + + + +L E + + QL H N
Sbjct: 14 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 60
Query: 140 LVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L+G +E+ L +V E+M +GS+ ++L RG L +K +L + +L
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYL 118
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGP-TGDKSHVSTRVMGTYGYAAPEY 257
++RD A N+L+ + AK+SDFGL ++ T D + + + APE
Sbjct: 119 EGN--NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEA 170
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRRA 285
L + KSD++SFG++L EI S R
Sbjct: 171 LREKKFSTKSDVWSFGILLWEIYSFGRV 198
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF---QGHKEWLTE 128
++ R LG+G FG V +G D S G + +AVK L + + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 129 INYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIA 188
+N + L H NL++L G L ++ V E P GS+ + L + +F + S + A
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS---RYA 117
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
+ A G+ +L S + I+RD A N+LL + K+ DFGL R P D +V
Sbjct: 118 VQVAEGMGYLESK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 249 T-YGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ + APE L T + SD + FGV L E+ +
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 25/208 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+G+G FG V G G +AVK + + + +L E + + QL H N
Sbjct: 29 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 75
Query: 140 LVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L+G +E+ L +V E+M +GS+ ++L RG L +K +L + +L
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYL 133
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGP-TGDKSHVSTRVMGTYGYAAPEY 257
++RD A N+L+ + AK+SDFGL ++ T D + + + APE
Sbjct: 134 EGN--NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEA 185
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGRRA 285
L + KSD++SFG++L EI S R
Sbjct: 186 LREKKFSTKSDVWSFGILLWEIYSFGRV 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF---QGHKEWLTE 128
++ R LG+G FG V +G D S G + +AVK L + + +++ E
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 129 INYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIA 188
+N + L H NL++L G L ++ V E P GS+ + L + +F + S + A
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS---RYA 127
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
+ A G+ +L S + I+RD A N+LL + K+ DFGL R P D +V
Sbjct: 128 VQVAEGMGYLESK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185
Query: 249 T-YGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ + APE L T + SD + FGV L E+ +
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+K RL+ E + EI+
Sbjct: 8 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 58
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 115
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GLAF HS +V++RD K N+L+++ KL+DFGLAR G T + T
Sbjct: 116 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 171
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF---QGHKEWLTE 128
++ R LG+G FG V +G D S G + +AVK L + + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 129 INYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIA 188
+N + L H NL++L G L ++ V E P GS+ + L + +F + S + A
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS---RYA 117
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
+ A G+ +L S + I+RD A N+LL + K+ DFGL R P D +V
Sbjct: 118 VQVAEGMGYLESK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 249 T-YGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ + APE L T + SD + FGV L E+ +
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 109
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR G T +
Sbjct: 110 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEV 165
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF---QGHKEWLTE 128
++ R LG+G FG V +G D S G + +AVK L + + +++ E
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 129 INYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIA 188
+N + L H NL++L G L ++ V E P GS+ + L + +F + S + A
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS---RYA 121
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
+ A G+ +L S + I+RD A N+LL + K+ DFGL R P D +V
Sbjct: 122 VQVAEGMGYLESK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 249 T-YGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ + APE L T + SD + FGV L E+ +
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+K RL+ E + EI+
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GLAF HS +V++RD K N+L+++ KL+DFGLAR G T + T
Sbjct: 112 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+K RL+ E + EI+
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 110
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GLAF HS +V++RD K N+L+++ KL+DFGLAR G T + T
Sbjct: 111 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+K RL+ E + EI+
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 110
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GLAF HS +V++RD K N+L+++ KL+DFGLAR G T + T
Sbjct: 111 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+K RL+ E + EI+
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GLAF HS +V++RD K N+L+++ KL+DFGLAR G T + T
Sbjct: 112 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 28/234 (11%)
Query: 57 SNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLN 115
+ +K+ R T + D V+G+G FG V+ G ++D+ A R + A+K L+
Sbjct: 9 AEVKDVLIPHERVVTHS---DRVIGKGHFGVVYHGEYIDQ---AQNR----IQCAIKSLS 58
Query: 116 Q-EGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDD---HRLLVYEFMPRGSMENHLFR 171
+ Q + +L E + L+HPN++ L+G L + H LL Y M G + F
Sbjct: 59 RITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY--MCHGDLLQ--FI 114
Query: 172 RGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLA 231
R P L + L A G+ +L AE K ++RD A N +LD ++ K++DFGLA
Sbjct: 115 RSPQRNPTVKDL-ISFGLQVARGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLA 171
Query: 232 RDGPTGDKSHVSTR----VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
RD D+ + S + + A E L T T KSD++SFGV+L E+L+
Sbjct: 172 RD--ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 122 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 171
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 172 CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 218
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 219 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + + +P + +AVK L + + + ++E+ + + H
Sbjct: 89 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR------------M 185
N++ L+G C +D ++ E+ +G++ +L R S+ + +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A G+ +L S K I+RD A N+L+ N K++DFGLARD D +T
Sbjct: 207 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV++ EI +
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+K RL+ E + EI+
Sbjct: 11 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 61
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 118
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GLAF HS +V++RD K N+L+++ KL+DFGLAR G T + T
Sbjct: 119 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 174
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + L +P +AVK L + + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR---GSYF---------QPLSWSLRM 185
N++ L+G C +D ++ E+ +G++ +L R G F + LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A A G+ +L A K I+RD A N+L+ + K++DFGLARD D +T
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV+L EI +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+K RL+ E + EI+
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GLAF HS +V++RD K N+L+++ KL+DFGLAR G T + T
Sbjct: 112 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKD---FMDASALTGIPLPLIKSY 108
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 114/249 (45%), Gaps = 20/249 (8%)
Query: 47 PRSEGEILQSSNI------KNFSYSDLRTATR-NFRPDSVLGEGGFGSVFKGWVDEHSLA 99
P +E Q SN K S SDL+ R N LG G FG V++G V S
Sbjct: 13 PTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGM 69
Query: 100 STRPGTGMLIAVKRLNQE-GFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYE 158
P + + +AVK L + Q ++L E + +L+H N+V+ +G L+ R ++ E
Sbjct: 70 PNDP-SPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLE 128
Query: 159 FMPRGSMENHLFR-RGSYFQPLSWSL--RMKIALGAANGLAFLHSAEPKVIYRDFKASNI 215
M G +++ L R QP S ++ + +A A G +L E I+RD A N
Sbjct: 129 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNC 186
Query: 216 LLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSF 272
LL AK+ DFG+ARD M + PE G T+K+D +SF
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 273 GVVLLEILS 281
GV+L EI S
Sbjct: 247 GVLLWEIFS 255
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 117 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TEL 166
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 213
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 214 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ PRG + L + + + + + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+ AN L++ HS +VI+RD K N+LL S K++DFG + P+ + +
Sbjct: 122 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXL 171
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 218
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 219 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 128/305 (41%), Gaps = 45/305 (14%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEIN 130
+N LGEG FG V K R G +AVK L + ++ L+E N
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFH---LKGRAGYTT-VAVKMLKENASPSELRDLLSEFN 78
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQP------------ 178
L Q++HP+++KL G C +D LL+ E+ GS+ L R P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSS 137
Query: 179 ---------LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFG 229
L+ + A + G+ +L AE K+++RD A NIL+ K+SDFG
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 230 LARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKN 289
L+RD D ++ + A E L T +SD++SFGV+L EI++ + N
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN 251
Query: 290 RPTGEHNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDM 349
G R+F +L + +++ L LQC EP RP
Sbjct: 252 PYPG------------IPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVF 299
Query: 350 DEVVK 354
++ K
Sbjct: 300 ADISK 304
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+K RL+ E + EI+
Sbjct: 11 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 61
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 118
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GLAF HS +V++RD K N+L+++ KL+DFGLAR G T + T
Sbjct: 119 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 174
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF---QGHKEWLTE 128
++ R LG+G FG V +G D S G + +AVK L + + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 129 INYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIA 188
+N + L H NL++L G L ++ V E P GS+ + L + +F + S + A
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS---RYA 117
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
+ A G+ +L S + I+RD A N+LL + K+ DFGL R P D V
Sbjct: 118 VQVAEGMGYLESK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 175
Query: 249 T-YGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ + APE L T + SD + FGV L E+ +
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 110
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 111 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + F S + L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---HQDLKTFMDASALTGIPLPLIKSY 111
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTE---- 128
N + LG G FG V V+ + + + +AVK L KE L
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 129 INYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQP--------LS 180
+++LGQ H N+V L+G C L++ E+ G + N L R+ + +
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 181 WSLR--MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGD 238
S R + + A G+AFL A I+RD A N+LL + + AK+ DFGLARD
Sbjct: 161 ASTRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 239 KSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
V + APE + T +SD++S+G++L EI S
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG GG +V ++ E ++ + + + R +E K + E++ QL H N
Sbjct: 19 LGGGGMSTV---YLAEDTILNIKVAIKAIFIPPREKEETL---KRFEREVHNSSQLSHQN 72
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V ++ EDD LV E++ ++ ++ G PLS + +G+ H
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIK--H 126
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR-VMGTYGYAAPEYL 258
+ + ++++RD K NIL+DSN K+ DFG+A+ + S T V+GT Y +PE
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK--ALSETSLTQTNHVLGTVQYFSPEQ- 183
Query: 259 ATGHLTAK-SDIYSFGVVLLEILSGR 283
A G T + +DIYS G+VL E+L G
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF---QGHKEWLTE 128
++ R LG+G FG V +G D S G + +AVK L + + +++ E
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 129 INYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIA 188
+N + L H NL++L G L ++ V E P GS+ + L + +F + S + A
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS---RYA 127
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
+ A G+ +L S + I+RD A N+LL + K+ DFGL R P D V
Sbjct: 128 VQVAEGMGYLESK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 185
Query: 249 T-YGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ + APE L T + SD + FGV L E+ +
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 111
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 110
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 111 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 110
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 111 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 109
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 110 LFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + + +P + +AVK L + + + ++E+ + + H
Sbjct: 30 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR------------M 185
N++ L+G C +D ++ E+ +G++ +L R S+ + +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A G+ +L S K I+RD A N+L+ N K++DFGLARD D +T
Sbjct: 148 SCTYQLARGMEYLASQ--KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV++ EI +
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 109
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 110 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + + +P + +AVK L + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR------------M 185
N++ L+G C +D ++ E+ +G++ +L R S+ + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A G+ +L S K I+RD A N+L+ N K++DFGLARD D +T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV++ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + + +P + +AVK L + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR------------M 185
N++ L+G C +D ++ E+ +G++ +L R S+ + +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A G+ +L S K I+RD A N+L+ N K++DFGLARD D +T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV++ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 111
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 100/232 (43%), Gaps = 31/232 (13%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTE---- 128
N + LG G FG V V+ + + + +AVK L KE L
Sbjct: 32 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 129 INYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYF------------ 176
+++LGQ H N+V L+G C L++ E+ G + N L R+
Sbjct: 88 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPE 145
Query: 177 -------QPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFG 229
+PL + + A G+AFL A I+RD A N+LL + + AK+ DFG
Sbjct: 146 GLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFG 203
Query: 230 LARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
LARD V + APE + T +SD++S+G++L EI S
Sbjct: 204 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + + +P + +AVK L + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR------------M 185
N++ L+G C +D ++ E+ +G++ +L R S+ + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A G+ +L S K I+RD A N+L+ N K++DFGLARD D +T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV++ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 120 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 169
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 216
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 217 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 117 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 166
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 213
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 214 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 128/305 (41%), Gaps = 45/305 (14%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEIN 130
+N LGEG FG V K R G +AVK L + ++ L+E N
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFH---LKGRAGYTT-VAVKMLKENASPSELRDLLSEFN 78
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQP------------ 178
L Q++HP+++KL G C +D LL+ E+ GS+ L R P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSS 137
Query: 179 ---------LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFG 229
L+ + A + G+ +L AE K+++RD A NIL+ K+SDFG
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 230 LARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKN 289
L+RD D ++ + A E L T +SD++SFGV+L EI++ + N
Sbjct: 196 LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN 251
Query: 290 RPTGEHNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDM 349
G R+F +L + +++ L LQC EP RP
Sbjct: 252 PYPG------------IPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVF 299
Query: 350 DEVVK 354
++ K
Sbjct: 300 ADISK 304
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREK-NSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS KVI+RD K N+LL S K++DFG + P+ ++ +
Sbjct: 117 LA----NALSYCHSK--KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC--- 167
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 168 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQD 213
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 214 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 122 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 171
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 218
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 219 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+K RL+ E + EI+
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 110
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V T
Sbjct: 111 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 166
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+K RL+ E + EI+
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 110
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V T
Sbjct: 111 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 166
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ ++ +S
Sbjct: 118 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS--- 168
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 169 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 214
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 215 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 77 DSVLGE----GGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINY 131
D VLGE G FG VF G + L+AVK + K ++L E
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLR---------ADNTLVAVKSCRETLPPDLKAKFLQEARI 165
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL-- 189
L Q HPN+V+L+G C + +V E + G L G+ LR+K L
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA-------RLRVKTLLQM 218
Query: 190 --GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
AA G+ +L S I+RD A N L+ K+SDFG++R+ G +
Sbjct: 219 VGDAAAGMEYLESK--CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQ 276
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L G +++SD++SFG++L E S
Sbjct: 277 VPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 55
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 112
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 113 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 169
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 170 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 122 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 171
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 218
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 219 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 23/225 (10%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW-- 125
R +F VLG+G FG V + + R GT L A+K L ++ +
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKV---------MLADRKGTEELYAIKILKKDVVIQDDDVEC 65
Query: 126 -LTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
+ E L L P + + C + RL V E++ G + H+ + G + +P +
Sbjct: 66 TMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY 125
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+I++G L FLH +IYRD K N++LDS + K++DFG+ ++ V+
Sbjct: 126 AAEISIG----LFFLHKR--GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM---DGVT 176
Query: 244 TR-VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAID 287
TR GT Y APE +A D +++GV+L E+L+G+ D
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 108/230 (46%), Gaps = 14/230 (6%)
Query: 60 KNFSYSDLRTATR-NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE- 117
K S SDL+ R N LG G FG V++G V S P + + +AVK L +
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 73
Query: 118 GFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFR-RGSYF 176
Q ++L E + +L+H N+V+ +G L+ R ++ E M G +++ L R
Sbjct: 74 SEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 177 QPLSWSL--RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLA 231
QP S ++ + +A A G +L E I+RD A N LL AK+ DFG+A
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
RD M + PE G T+K+D +SFGV+L EI S
Sbjct: 192 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+K RL+ E + EI+
Sbjct: 5 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 55
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 112
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V T
Sbjct: 113 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 168
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + + +P + +AVK L + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR------------M 185
N++ L+G C +D ++ E+ +G++ +L R S+ + +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A G+ +L S K I+RD A N+L+ N K++DFGLARD D +T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV++ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEINYLGQLH 136
+LGEG FGSV +G + + GT + +AVK +L+ + +E+L+E +
Sbjct: 41 ILGEGEFGSVMEGNLKQED------GTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 137 HPNLVKLVGYCLEDDHR-----LLVYEFMPRGSMENHL----FRRGSYFQPLSWSLRMKI 187
HPN+++L+G C+E + +++ FM G + +L G PL L+ +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
+ A G+ +L + ++RD A N +L + ++DFGL++ +GD
Sbjct: 155 DI--ALGMEYLSNR--NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAK 210
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEI 279
+ A E LA T+KSD+++FGV + EI
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+K RL+ E + EI+
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GL+F HS +V++RD K N+L+++ KL+DFGLAR G T + T
Sbjct: 112 LLQGLSFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 118 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 167
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 214
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 215 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 109 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + + +P + +AVK L + + + ++E+ + + H
Sbjct: 35 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR------------M 185
N++ L+G C +D ++ E+ +G++ +L R S+ + +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A G+ +L S K I+RD A N+L+ N K++DFGLARD D +T
Sbjct: 153 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV++ EI +
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 117 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXL 166
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 213
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 214 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINYLGQL-HH 137
LG G FG V ++ + + T +AVK L + H+ ++E+ L + HH
Sbjct: 36 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 91
Query: 138 PNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQP-----------LSWSLRM 185
N+V L+G C + L+V EF G++ +L + + F P L+ +
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
+ A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 152 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + + +P + +AVK L + + + ++E+ + + H
Sbjct: 32 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR------------M 185
N++ L+G C +D ++ E+ +G++ +L R S+ + +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A G+ +L S K I+RD A N+L+ N K++DFGLARD D +T
Sbjct: 150 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV++ EI +
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINYLGQL-HH 137
LG G FG V ++ + + T +AVK L + H+ ++E+ L + HH
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 138 PNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQP----------LSWSLRMK 186
N+V L+G C + L+V EF G++ +L + + F P L+ +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+ A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 153 YSFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 55
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 56 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 115
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 116 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 165
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 166 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 212
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 213 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 41/287 (14%)
Query: 80 LGEGGFGSVFKGWVDE--HSLASTRPGTGMLIAVKRLNQEG-FQGHKEWLTEINYLGQLH 136
LG+G FG V++G + A TR +AVK +N+ + E+L E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR------VAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQ------PLSWSLRMKIALG 190
++V+L+G + L+V E M G ++++L + P + +++A
Sbjct: 79 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
A+G+A+L++ K ++RD A N ++ ++ K+ DFG+ RD + +
Sbjct: 139 IADGMAYLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV 196
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPY--LTSK 308
+ APE L G T SD++SFGVVL EI S L E +PY L+++
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNE 239
Query: 309 RRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVV 353
+ + V+D G P ++ L C PK+RP E+V
Sbjct: 240 QVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 117 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 166
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 213
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 214 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 117 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 166
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 213
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 214 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTE---- 128
N + LG G FG V V+ + + + +AVK L KE L
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 129 INYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRG------SYF------ 176
+++LGQ H N+V L+G C L++ E+ G + N L R+ SY
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPE 160
Query: 177 QPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPT 236
+ LS + + A G+AFL A I+RD A N+LL + + AK+ DFGLARD
Sbjct: 161 EQLSSRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 237 GDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
V + APE + T +SD++S+G++L EI S
Sbjct: 219 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + + +P + +AVK L + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR------------M 185
N++ L+G C +D ++ E+ +G++ +L R S+ + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A G+ +L S K I+RD A N+L+ N +++DFGLARD D +T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV++ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 120 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 169
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 216
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 217 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 60
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 120
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 121 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 170
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 217
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 218 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 77 DSVLGE----GGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINY 131
D VLGE G FG VF G + L+AVK + K ++L E
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLR---------ADNTLVAVKSCRETLPPDLKAKFLQEARI 165
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL-- 189
L Q HPN+V+L+G C + +V E + G L G+ LR+K L
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA-------RLRVKTLLQM 218
Query: 190 --GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
AA G+ +L S I+RD A N L+ K+SDFG++R+ G +
Sbjct: 219 VGDAAAGMEYLESK--CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQ 276
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L G +++SD++SFG++L E S
Sbjct: 277 VPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINYLGQL-HH 137
LG G FG V ++ + + T +AVK L + H+ ++E+ L + HH
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSMENHLFRRGSYFQP------------LSWSLR 184
N+V L+G C + L+V EF G++ +L + + F P L+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVST 244
+ + A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINYLGQL-HH 137
LG G FG V ++ + + T +AVK L + H+ ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSMENHLFRRGSYFQP------------LSWSLR 184
N+V L+G C + L+V EF G++ +L + + F P L+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVST 244
+ + A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 27/242 (11%)
Query: 49 SEGEILQSSNIKNFSYSDLRTATRNFRPDSV------LGEGGFGSVFKGWVDEHSLASTR 102
S G L + N+ S TR+ P+ LG+G FG V+K E
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE------- 60
Query: 103 PGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPR 162
T +L A K ++ + + ++++ EI+ L HPN+VKL+ +++ ++ EF
Sbjct: 61 --TSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 163 GSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN 222
G+++ + +PL+ S + + L +LH + K+I+RD KA NIL + +
Sbjct: 119 GAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGD 173
Query: 223 AKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGH-----LTAKSDIYSFGVVLL 277
KL+DFG++ + S +GT + APE + K+D++S G+ L+
Sbjct: 174 IKLADFGVSAKNTRTIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 278 EI 279
E+
Sbjct: 232 EM 233
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINYLGQL-HH 137
LG G FG V ++ + + T +AVK L + H+ ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 138 PNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQP------------LSWSLR 184
N+V L+G C + L+V EF G++ +L + + F P L+
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVST 244
+ + A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 27/242 (11%)
Query: 49 SEGEILQSSNIKNFSYSDLRTATRNFRPDSV------LGEGGFGSVFKGWVDEHSLASTR 102
S G L + N+ S TR+ P+ LG+G FG V+K E
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE------- 60
Query: 103 PGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPR 162
T +L A K ++ + + ++++ EI+ L HPN+VKL+ +++ ++ EF
Sbjct: 61 --TSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 163 GSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN 222
G+++ + +PL+ S + + L +LH + K+I+RD KA NIL + +
Sbjct: 119 GAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGD 173
Query: 223 AKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGH-----LTAKSDIYSFGVVLL 277
KL+DFG++ + S +GT + APE + K+D++S G+ L+
Sbjct: 174 IKLADFGVSAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 278 EI 279
E+
Sbjct: 232 EM 233
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 113/249 (45%), Gaps = 20/249 (8%)
Query: 47 PRSEGEILQSSNI------KNFSYSDLRTATR-NFRPDSVLGEGGFGSVFKGWVDEHSLA 99
P +E Q SN K S SDL+ R N LG G FG V++G V S
Sbjct: 13 PTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGM 69
Query: 100 STRPGTGMLIAVKRLNQE-GFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYE 158
P + + +AVK L + Q ++L E + + +H N+V+ +G L+ R ++ E
Sbjct: 70 PNDP-SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILME 128
Query: 159 FMPRGSMENHLFR-RGSYFQPLSWSLR--MKIALGAANGLAFLHSAEPKVIYRDFKASNI 215
M G +++ L R QP S ++ + +A A G +L E I+RD A N
Sbjct: 129 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNC 186
Query: 216 LLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSF 272
LL AK+ DFG+ARD M + PE G T+K+D +SF
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 273 GVVLLEILS 281
GV+L EI S
Sbjct: 247 GVLLWEIFS 255
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 41/287 (14%)
Query: 80 LGEGGFGSVFKGWVDE--HSLASTRPGTGMLIAVKRLNQEG-FQGHKEWLTEINYLGQLH 136
LG+G FG V++G + A TR +AVK +N+ + E+L E + +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETR------VAVKTVNESASLRERIEFLNEASVMKGFT 79
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQ------PLSWSLRMKIALG 190
++V+L+G + L+V E M G ++++L + P + +++A
Sbjct: 80 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
A+G+A+L++ K ++R+ A N ++ ++ K+ DFG+ RD D + +
Sbjct: 140 IADGMAYLNAK--KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPY--LTSK 308
+ APE L G T SD++SFGVVL EI S L E +PY L+++
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNE 240
Query: 309 RRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVV 353
+ + V+D G P ++ L C P +RP E+V
Sbjct: 241 QVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 284
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 41/287 (14%)
Query: 80 LGEGGFGSVFKGWVDE--HSLASTRPGTGMLIAVKRLNQEG-FQGHKEWLTEINYLGQLH 136
LG+G FG V++G + A TR +AVK +N+ + E+L E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR------VAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQ------PLSWSLRMKIALG 190
++V+L+G + L+V E M G ++++L + P + +++A
Sbjct: 79 CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
A+G+A+L++ K ++R+ A N ++ ++ K+ DFG+ RD D + +
Sbjct: 139 IADGMAYLNAK--KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPY--LTSK 308
+ APE L G T SD++SFGVVL EI S L E +PY L+++
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNE 239
Query: 309 RRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVV 353
+ + V+D G P ++ L C P +RP E+V
Sbjct: 240 QVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 113/249 (45%), Gaps = 20/249 (8%)
Query: 47 PRSEGEILQSSNI------KNFSYSDLRTATR-NFRPDSVLGEGGFGSVFKGWVDEHSLA 99
P +E Q SN K S SDL+ R N LG G FG V++G V S
Sbjct: 13 PTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGM 69
Query: 100 STRPGTGMLIAVKRLNQE-GFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYE 158
P + + +AVK L + Q ++L E + + +H N+V+ +G L+ R ++ E
Sbjct: 70 PNDP-SPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 128
Query: 159 FMPRGSMENHLFR-RGSYFQPLSWSLR--MKIALGAANGLAFLHSAEPKVIYRDFKASNI 215
M G +++ L R QP S ++ + +A A G +L E I+RD A N
Sbjct: 129 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNC 186
Query: 216 LLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSF 272
LL AK+ DFG+ARD M + PE G T+K+D +SF
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 273 GVVLLEILS 281
GV+L EI S
Sbjct: 247 GVLLWEIFS 255
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+ RL+ E + EI+
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALXKIRLDTETEGVPSTAIREIS 54
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GLAF HS +V++RD K N+L+++ KL+DFGLAR G T + T
Sbjct: 112 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+ RL+ E + EI+
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALXKIRLDTETEGVPSTAIREIS 53
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+EF+ + + F S + L
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 110
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GLAF HS +V++RD K N+L+++ KL+DFGLAR G T + T
Sbjct: 111 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + L +P +AVK L + + + ++E+ + + H
Sbjct: 21 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGS-----YFQP-------LSWSLRM 185
N++ L+G C +D ++ E+ +G++ +L R + P LS +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A A G+ +L A K I+RD A N+L+ + K++DFGLARD D +T
Sbjct: 139 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV+L EI +
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 105/230 (45%), Gaps = 14/230 (6%)
Query: 60 KNFSYSDLRTATR-NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE- 117
K S SDL+ R N LG G FG V++G V + + +AVK L +
Sbjct: 44 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVS----GMPNDPSPLQVAVKTLPEVC 99
Query: 118 GFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFR-RGSYF 176
Q ++L E + + +H N+V+ +G L+ R ++ E M G +++ L R
Sbjct: 100 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 159
Query: 177 QPLSWSLR--MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLA 231
QP S ++ + +A A G +L E I+RD A N LL AK+ DFG+A
Sbjct: 160 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 217
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
RD M + PE G T+K+D +SFGV+L EI S
Sbjct: 218 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + L +P +AVK L + + + ++E+ + + H
Sbjct: 29 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRG------SYF------QPLSWSLRM 185
N++ L+G C +D ++ E+ +G++ +L R SY + LS +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A A G+ +L A K I+RD A N+L+ + K++DFGLARD D +T
Sbjct: 147 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV+L EI +
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + L +P +AVK L + + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRG------SYF------QPLSWSLRM 185
N++ L+G C +D ++ E+ +G++ +L R SY + LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A A G+ +L A K I+RD A N+L+ + K++DFGLARD D +T
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV+L EI +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 31/244 (12%)
Query: 49 SEGEILQSSNIKNFSYSDLRTATRNFRPDSV------LGEGGFGSVFKGWVDEHSLASTR 102
S G L + N+ S TR+ P+ LG+G FG V+K E
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE------- 60
Query: 103 PGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPR 162
T +L A K ++ + + ++++ EI+ L HPN+VKL+ +++ ++ EF
Sbjct: 61 --TSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 163 GSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN 222
G+++ + +PL+ S + + L +LH + K+I+RD KA NIL + +
Sbjct: 119 GAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGD 173
Query: 223 AKLSDFGLARDGPTGDKSHVSTR--VMGTYGYAAPEYLATGH-----LTAKSDIYSFGVV 275
KL+DFG++ + + R +GT + APE + K+D++S G+
Sbjct: 174 IKLADFGVS----AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 276 LLEI 279
L+E+
Sbjct: 230 LIEM 233
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + L +P +AVK L + + + ++E+ + + H
Sbjct: 25 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRG------SYF------QPLSWSLRM 185
N++ L+G C +D ++ E+ +G++ +L R SY + LS +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A A G+ +L A K I+RD A N+L+ + K++DFGLARD D +T
Sbjct: 143 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV+L EI +
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + L +P +AVK L + + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRG------SYF------QPLSWSLRM 185
N++ L+G C +D ++ E+ +G++ +L R SY + LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A A G+ +L A K I+RD A N+L+ + K++DFGLARD D +T
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV+L EI +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 127/305 (41%), Gaps = 45/305 (14%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEIN 130
+N LGEG FG V K R G +AVK L + ++ L+E N
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFH---LKGRAGYTT-VAVKMLKENASPSELRDLLSEFN 78
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQP------------ 178
L Q++HP+++KL G C +D LL+ E+ GS+ L R P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSS 137
Query: 179 ---------LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFG 229
L+ + A + G+ +L AE +++RD A NIL+ K+SDFG
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYL--AEMSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 230 LARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKN 289
L+RD D ++ + A E L T +SD++SFGV+L EI++ + N
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN 251
Query: 290 RPTGEHNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDM 349
G R+F +L + +++ L LQC EP RP
Sbjct: 252 PYPG------------IPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVF 299
Query: 350 DEVVK 354
++ K
Sbjct: 300 ADISK 304
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 107/230 (46%), Gaps = 14/230 (6%)
Query: 60 KNFSYSDLRTATR-NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE- 117
K S SDL+ R N LG G FG V++G V S P + + +AVK L +
Sbjct: 34 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 89
Query: 118 GFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFR-RGSYF 176
Q ++L E + + +H N+V+ +G L+ R ++ E M G +++ L R
Sbjct: 90 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 149
Query: 177 QPLSWSLR--MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLA 231
QP S ++ + +A A G +L E I+RD A N LL AK+ DFG+A
Sbjct: 150 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 207
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
RD M + PE G T+K+D +SFGV+L EI S
Sbjct: 208 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 107/230 (46%), Gaps = 14/230 (6%)
Query: 60 KNFSYSDLRTATR-NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE- 117
K S SDL+ R N LG G FG V++G V S P + + +AVK L +
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 72
Query: 118 GFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFR-RGSYF 176
Q ++L E + + +H N+V+ +G L+ R ++ E M G +++ L R
Sbjct: 73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPS 132
Query: 177 QPLSWSLR--MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLA 231
QP S ++ + +A A G +L E I+RD A N LL AK+ DFG+A
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
RD M + PE G T+K+D +SFGV+L EI S
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINYLGQL-HH 137
LG G FG V ++ + + T +AVK L + H+ ++E+ L + HH
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 138 PNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQP--------LSWSLRMKIA 188
N+V L+G C + L+V EF G++ +L + + F P L+ + +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 151 FQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 249 TYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINYLGQL-HH 137
LG G FG V ++ + + T +AVK L + H+ ++E+ L + HH
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSMENHLFRRGSYFQP--------LSWSLRMKIA 188
N+V L+G C + L+V EF G++ +L + + F P L+ + +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 151 FQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 249 TYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 51/287 (17%)
Query: 73 NFRPDSVLGEGGFGSVFKG-W--VDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI 129
+ R + LG+G FG V+ G W ++ + +PGT ++ E F L E
Sbjct: 9 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAF------LQEA 54
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L H LV+L + ++ +V E+M +GS+ + F +G + L + +A
Sbjct: 55 QVMKKLRHEKLVQLYA-VVSEEPIXIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAA 111
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R
Sbjct: 112 QIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEXTARQGAK 166
Query: 250 Y--GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTS 307
+ + APE G T KSD++SFG++L E+ + R PY
Sbjct: 167 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGM 209
Query: 308 KRRIFRVLDPRLEGQFSLPQAQKAAS----LALQCLSVEPKLRPDMD 350
R VLD ++E + +P + L QC EP+ RP +
Sbjct: 210 VNR--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFE 253
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 107/230 (46%), Gaps = 14/230 (6%)
Query: 60 KNFSYSDLRTATR-NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE- 117
K S SDL+ R N LG G FG V++G V S P + + +AVK L +
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 72
Query: 118 GFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFR-RGSYF 176
Q ++L E + + +H N+V+ +G L+ R ++ E M G +++ L R
Sbjct: 73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 132
Query: 177 QPLSWSLR--MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLA 231
QP S ++ + +A A G +L E I+RD A N LL AK+ DFG+A
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
RD M + PE G T+K+D +SFGV+L EI S
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINYLGQL-HH 137
LG G FG V ++ + + T +AVK L + H+ ++E+ L + HH
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 138 PNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQP------------LSWSLR 184
N+V L+G C + L+V EF G++ +L + + F P L+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVST 244
+ + A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 107/230 (46%), Gaps = 14/230 (6%)
Query: 60 KNFSYSDLRTATR-NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE- 117
K S SDL+ R N LG G FG V++G V S P + + +AVK L +
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 73
Query: 118 GFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFR-RGSYF 176
Q ++L E + + +H N+V+ +G L+ R ++ E M G +++ L R
Sbjct: 74 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 177 QPLSWSLR--MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLA 231
QP S ++ + +A A G +L E I+RD A N LL AK+ DFG+A
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
RD M + PE G T+K+D +SFGV+L EI S
Sbjct: 192 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + L +P +AVK L + + + ++E+ + + H
Sbjct: 28 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRG------SYF------QPLSWSLRM 185
N++ L+G C +D ++ E+ +G++ +L R SY + LS +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A A G+ +L A K I+RD A N+L+ + K++DFGLARD D +T
Sbjct: 146 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV+L EI +
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 107/230 (46%), Gaps = 14/230 (6%)
Query: 60 KNFSYSDLRTATR-NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE- 117
K S SDL+ R N LG G FG V++G V S P + + +AVK L +
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 64
Query: 118 GFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFR-RGSYF 176
Q ++L E + + +H N+V+ +G L+ R ++ E M G +++ L R
Sbjct: 65 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 124
Query: 177 QPLSWSLR--MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLA 231
QP S ++ + +A A G +L E I+RD A N LL AK+ DFG+A
Sbjct: 125 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 182
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
RD M + PE G T+K+D +SFGV+L EI S
Sbjct: 183 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINY 131
R VLG G FG+V KG W+ E S + + + + ++ FQ + + I
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGE--SIKIPVCIKVIEDKSGRQSFQAVTDHMLAI-- 87
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQP---LSWSLRMKIA 188
G L H ++V+L+G C +L V +++P GS+ +H+ + P L+W +++
Sbjct: 88 -GSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI--- 142
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
A G+ +L E +++R+ A N+LL S +++DFG+A P DK + +
Sbjct: 143 ---AKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 197
Query: 249 TYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + G T +SD++S+GV + E+++
Sbjct: 198 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 107/230 (46%), Gaps = 14/230 (6%)
Query: 60 KNFSYSDLRTATR-NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE- 117
K S SDL+ R N LG G FG V++G V S P + + +AVK L +
Sbjct: 24 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 79
Query: 118 GFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFR-RGSYF 176
Q ++L E + + +H N+V+ +G L+ R ++ E M G +++ L R
Sbjct: 80 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 139
Query: 177 QPLSWSLR--MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLA 231
QP S ++ + +A A G +L E I+RD A N LL AK+ DFG+A
Sbjct: 140 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 197
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
RD M + PE G T+K+D +SFGV+L EI S
Sbjct: 198 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+ AN L++ HS +VI+RD K N+LL S K+++FG + P+ + T +
Sbjct: 119 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTL 168
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 215
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 216 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINY 131
R VLG G FG+V KG W+ E S + + + + ++ FQ + + I
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGE--SIKIPVCIKVIEDKSGRQSFQAVTDHMLAI-- 69
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQP---LSWSLRMKIA 188
G L H ++V+L+G C +L V +++P GS+ +H+ + P L+W +++
Sbjct: 70 -GSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI--- 124
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
A G+ +L E +++R+ A N+LL S +++DFG+A P DK + +
Sbjct: 125 ---AKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 179
Query: 249 TYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + G T +SD++S+GV + E+++
Sbjct: 180 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--------LAREKQ-SKFILALKVLFKAQLEKAGVEHQLR 59
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ ++ +
Sbjct: 120 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC--- 170
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 171 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 216
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 217 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINYLGQL-HH 137
LG G FG V ++ + + T +AVK L + H+ ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSMENHLFRRGSYFQP------------LSWSLR 184
N+V L+G C + L+V EF G++ +L + + F P L+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVST 244
+ + A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+ AN L++ HS +VI+RD K N+LL S K++DFG + P+ + +
Sbjct: 119 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC--- 169
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 170 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 215
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 216 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 51/287 (17%)
Query: 73 NFRPDSVLGEGGFGSVFKG-W--VDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI 129
+ R + LG+G FG V+ G W ++ + +PGT ++ E F L E
Sbjct: 12 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAF------LQEA 57
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L H LV+L + ++ +V E+M +GS+ + F +G + L + +A
Sbjct: 58 QVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAA 114
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R
Sbjct: 115 QIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAK 169
Query: 250 Y--GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTS 307
+ + APE G T KSD++SFG++L E+ + R PY
Sbjct: 170 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGM 212
Query: 308 KRRIFRVLDPRLEGQFSLPQAQKAAS----LALQCLSVEPKLRPDMD 350
R VLD ++E + +P + L QC EP+ RP +
Sbjct: 213 VNR--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFE 256
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + L +P +AVK L + + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR-----GSYFQP-------LSWSLRM 185
N++ L+G C +D ++ E+ +G++ +L R + P LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A A G+ +L A K I+RD A N+L+ + K++DFGLARD D +T
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV+L EI +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+ AN L++ HS +VI+RD K N+LL S K++DFG + P+ + +
Sbjct: 118 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TL 167
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 214
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 215 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 72 RNFRPDSV------LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW 125
R+ P+ V LG+G FG V+K E TG L A K + + + +++
Sbjct: 13 RDLDPNEVWEIVGELGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDY 63
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRM 185
+ EI L HP +VKL+G D ++ EF P G+++ + +
Sbjct: 64 IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC 123
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGL-ARDGPTGDKSHVST 244
+ L A N FLHS ++I+RD KA N+L+ + +L+DFG+ A++ T K
Sbjct: 124 RQMLEALN---FLHSK--RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD--- 175
Query: 245 RVMGTYGYAAPEYLATGHLTA-----KSDIYSFGVVLLEI 279
+GT + APE + + K+DI+S G+ L+E+
Sbjct: 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + ++A+K L + + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVY--------LAREK-QRKFILALKVLFKAQLEKAGVEHQLR 53
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 54 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 113
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ + T +
Sbjct: 114 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 163
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 164 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 210
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 211 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+A N L++ HS +VI+RD K N+LL S K++DFG + P+ ++ +
Sbjct: 117 LA----NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC--- 167
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 168 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 213
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 214 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 132/284 (46%), Gaps = 45/284 (15%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYL 132
+ R + LG+G FG V+ G + +TR +A+K L + G + +L E +
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTWN----GTTR------VAIKTL-KPGTMSPEAFLQEAQVM 316
Query: 133 GQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAA 192
+L H LV+L + ++ +V E+M +GS+ + F +G + L + +A A
Sbjct: 317 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIA 373
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY-- 250
+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R +
Sbjct: 374 SGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 428
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ APE G T KSD++SFG++L E+ + R PY R
Sbjct: 429 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVNR 471
Query: 311 IFRVLDPRLEGQFSLPQAQKAA----SLALQCLSVEPKLRPDMD 350
VLD ++E + +P + L QC EP+ RP +
Sbjct: 472 --EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFE 512
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINYLGQL-HH 137
LG G FG V ++ + + T +AVK L + H+ ++E+ L + HH
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 138 PNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQP------------LSWSLR 184
N+V L+G C + L+V EF G++ +L + + F P L+
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVST 244
+ + A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 153 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINYLGQL-HH 137
LG G FG V ++ + + T +AVK L + H+ ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSMENHLFRRGSYFQP------------LSWSLR 184
N+V L+G C + L+V EF G++ +L + + F P L+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVST 244
+ + A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 27/218 (12%)
Query: 73 NFRPDSVLGEGGFGSVFKG-W--VDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI 129
+ R + LG+G FG V+ G W ++ + +PGT ++ E F L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAF------LQEA 64
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L H LV+L + ++ +V E+M +GS+ + F +G + L + +A
Sbjct: 65 QVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAA 121
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R
Sbjct: 122 QIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEXTARQGAK 176
Query: 250 Y--GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRA 285
+ + APE G T KSD++SFG++L E+ + R
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 107/230 (46%), Gaps = 14/230 (6%)
Query: 60 KNFSYSDLRTATR-NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE- 117
K S SDL+ R N LG G FG V++G V S P + + +AVK L +
Sbjct: 35 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 90
Query: 118 GFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFR-RGSYF 176
Q ++L E + + +H N+V+ +G L+ R ++ E M G +++ L R
Sbjct: 91 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 150
Query: 177 QPLSWSLR--MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLA 231
QP S ++ + +A A G +L E I+RD A N LL AK+ DFG+A
Sbjct: 151 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 208
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
RD M + PE G T+K+D +SFGV+L EI S
Sbjct: 209 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINYLGQL-HH 137
LG G FG V ++ + + T +AVK L + H+ ++E+ L + HH
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 138 PNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQP------------LSWSLR 184
N+V L+G C + L+V EF G++ +L + + F P L+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVST 244
+ + A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+ AN L++ HS +VI+RD K N+LL S K+++FG + P+ + T +
Sbjct: 120 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTL 169
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 216
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 217 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + + +P + +AVK L + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR------------M 185
N++ L+G C +D ++ + +G++ +L R S+ + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A G+ +L S K I+RD A N+L+ N K++DFGLARD D +T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV++ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 107/230 (46%), Gaps = 14/230 (6%)
Query: 60 KNFSYSDLRTATR-NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE- 117
K S SDL+ R N LG G FG V++G V S P + + +AVK L +
Sbjct: 58 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 113
Query: 118 GFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFR-RGSYF 176
Q ++L E + + +H N+V+ +G L+ R ++ E M G +++ L R
Sbjct: 114 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 173
Query: 177 QPLSWSLR--MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLA 231
QP S ++ + +A A G +L E I+RD A N LL AK+ DFG+A
Sbjct: 174 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
RD M + PE G T+K+D +SFGV+L EI S
Sbjct: 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 72 RNFRPDSV------LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW 125
R+ P+ V LG+G FG V+K + TG L A K + + + +++
Sbjct: 5 RDLDPNEVWEIVGELGDGAFGKVYK---------AKNKETGALAAAKVIETKSEEELEDY 55
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRM 185
+ EI L HP +VKL+G D ++ EF P G+++ + +
Sbjct: 56 IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC 115
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGL-ARDGPTGDKSHVST 244
+ L A N FLHS ++I+RD KA N+L+ + +L+DFG+ A++ T K
Sbjct: 116 RQMLEALN---FLHSK--RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD--- 167
Query: 245 RVMGTYGYAAPEYLATGHLTA-----KSDIYSFGVVLLEI 279
+GT + APE + + K+DI+S G+ L+E+
Sbjct: 168 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 27/218 (12%)
Query: 73 NFRPDSVLGEGGFGSVFKG-W--VDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI 129
+ R + LG+G FG V+ G W ++ + +PGT ++ E F L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAF------LQEA 64
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L H LV+L + ++ +V E+M +GS+ + F +G + L + +A
Sbjct: 65 QVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAA 121
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R
Sbjct: 122 QIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAK 176
Query: 250 Y--GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRA 285
+ + APE G T KSD++SFG++L E+ + R
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINYLGQL-HH 137
LG G FG V ++ + + T +AVK L + H+ ++E+ L + HH
Sbjct: 72 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 138 PNLVKLVGYCLEDDHRLLVY-EFMPRGSMENHLFRRGSYFQP------------LSWSLR 184
N+V L+G C + L+V EF G++ +L + + F P L+
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVST 244
+ + A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 188 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 41/290 (14%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINY 131
+F S LG G G VFK S +P +G+++A K ++ E + + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGA 191
L + + P +V G D + E M GS++ L + G + + K+++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 113
Query: 192 ANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYG 251
GL +L K+++RD K SNIL++S KL DFG++ G D ++ +GT
Sbjct: 114 IKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 252 YAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRI 311
Y +PE L H + +SDI+S G+ L+E+ GR P + E ++P + I
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR------YPIPPPDAKEDSRPPMA----I 218
Query: 312 FRVLD-------PRL-EGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
F +LD P+L G FSL + +CL P R D+ +++
Sbjct: 219 FELLDYIVNEPPPKLPSGVFSL----EFQDFVNKCLIKNPAERADLKQLM 264
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 27/218 (12%)
Query: 73 NFRPDSVLGEGGFGSVFKG-W--VDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI 129
+ R + LG+G FG V+ G W ++ + +PGT ++ E F L E
Sbjct: 10 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAF------LQEA 55
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L H LV+L + ++ +V E+M +GS+ + F +G + L + +A
Sbjct: 56 QVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAA 112
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R
Sbjct: 113 QIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAK 167
Query: 250 Y--GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRA 285
+ + APE G T KSD++SFG++L E+ + R
Sbjct: 168 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 205
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE--- 124
R +F VLG+G FG V + S R GT L AVK L ++ +
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKV---------MLSERKGTDELYAVKILKKDVVIQDDDVEC 387
Query: 125 WLTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
+ E L P + + C + RL V E++ G + H+ + G + +P +
Sbjct: 388 TMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY 447
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR----DGPTGDK 239
+IA+G L FL S +IYRD K N++LDS + K++DFG+ + DG T
Sbjct: 448 AAEIAIG----LFFLQSK--GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--- 498
Query: 240 SHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
+ GT Y APE +A D ++FGV+L E+L+G+
Sbjct: 499 ---TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 27/218 (12%)
Query: 73 NFRPDSVLGEGGFGSVFKG-W--VDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI 129
+ R + LG+G FG V+ G W ++ + +PGT ++ E F L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAF------LQEA 64
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L H LV+L + ++ +V E+M +GS+ + F +G + L + +A
Sbjct: 65 QVMKKLRHEKLVQLYA-VVSEEPIYIVCEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAA 121
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R
Sbjct: 122 QIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAK 176
Query: 250 Y--GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRA 285
+ + APE G T KSD++SFG++L E+ + R
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+ AN L++ HS +VI+RD K N+LL S K++DFG + P+ + +
Sbjct: 120 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC--- 170
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 171 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 216
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 217 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+ AN L++ HS +VI+RD K N+LL S K++DFG + P+ + +
Sbjct: 117 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC--- 167
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 168 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 213
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 214 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLTEIN 130
NF+ +GEG +G V+K + TG ++A+K RL+ E + EI+
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L +L+HPN+VKL+ ++ LV+E + + F S + L
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEHV---HQDLKTFMDASALTGIPLPLIKSYLFQ 110
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
GLAF HS +V++RD K N+L+++ KL+DFGLAR G T + T
Sbjct: 111 LLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 251 GYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L + + DI+S G + E+++ RRA+
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWL 126
A +F LG+G FG+V+ LA + + ++A+K L + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--------LAREK-QSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E+ L HPN+++L GY + L+ E+ P G++ L + + + + + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
+ AN L++ HS +VI+RD K N+LL S K++DFG + P+ + +
Sbjct: 120 L----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC--- 170
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
GT Y PE + K D++S GV+ E L G+ + N Y
Sbjct: 171 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------------TYQE 216
Query: 307 SKRRIFRVLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLRPDMDEVVK 354
+ +RI RV +F+ P + A L + L P RP + EV++
Sbjct: 217 TYKRISRV-------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 131/284 (46%), Gaps = 45/284 (15%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYL 132
+ R + LG+G FG V+ G T GT +A+K L + G + +L E +
Sbjct: 185 SLRLEVKLGQGCFGEVWMG---------TWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVM 233
Query: 133 GQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAA 192
+L H LV+L + ++ +V E+M +GS+ + F +G + L + +A A
Sbjct: 234 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIA 290
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY-- 250
+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R +
Sbjct: 291 SGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 345
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ APE G T KSD++SFG++L E+ + R PY R
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVNR 388
Query: 311 IFRVLDPRLEGQFSLPQAQKAAS----LALQCLSVEPKLRPDMD 350
VLD ++E + +P + L QC EP+ RP +
Sbjct: 389 --EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 27/218 (12%)
Query: 73 NFRPDSVLGEGGFGSVFKG-W--VDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI 129
+ R + LG+G FG V+ G W ++ + +PGT ++ E F L E
Sbjct: 8 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAF------LQEA 53
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L H LV+L + ++ +V E+M +GS+ + F +G + L + +A
Sbjct: 54 QVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAA 110
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R
Sbjct: 111 QIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAK 165
Query: 250 Y--GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRA 285
+ + APE G T KSD++SFG++L E+ + R
Sbjct: 166 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 203
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + ST+ +AVK L + G + +L E N + L H
Sbjct: 21 LGAGQFGEVWMGYYNN----STK------VAVKTL-KPGTMSVQAFLEEANLMKTLQHDK 69
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR--GSYFQPLSWSLRMKIALGAANGLAF 197
LV+L ++ ++ E+M +GS+ + L G P +IA G+A+
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA----EGMAY 125
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAP 255
+ I+RD +A+N+L+ + K++DFGLAR + + + R + + AP
Sbjct: 126 IERK--NYIHRDLRAANVLVSESLMCKIADFGLAR---VIEDNEYTAREGAKFPIKWTAP 180
Query: 256 EYLATGHLTAKSDIYSFGVVLLEILS 281
E + G T KSD++SFG++L EI++
Sbjct: 181 EAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 27/218 (12%)
Query: 73 NFRPDSVLGEGGFGSVFKG-W--VDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI 129
+ R + LG+G FG V+ G W ++ + +PGT ++ E F L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAF------LQEA 64
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L H LV+L + ++ +V E+M +GS+ + F +G + L + +A
Sbjct: 65 QVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAA 121
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R
Sbjct: 122 QIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAK 176
Query: 250 Y--GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRA 285
+ + APE G T KSD++SFG++L E+ + R
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 24/206 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V+ G+ + ST+ +AVK L + G + +L E N + L H
Sbjct: 20 LGAGQFGEVWMGYYNN----STK------VAVKTL-KPGTMSVQAFLEEANLMKTLQHDK 68
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR--GSYFQPLSWSLRMKIALGAANGLAF 197
LV+L +++ ++ EFM +GS+ + L G P +IA G+A+
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA----EGMAY 124
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAAP 255
+ I+RD +A+N+L+ + K++DFGLAR + + + R + + AP
Sbjct: 125 IE--RKNYIHRDLRAANVLVSESLMCKIADFGLAR---VIEDNEYTAREGAKFPIKWTAP 179
Query: 256 EYLATGHLTAKSDIYSFGVVLLEILS 281
E + G T KS+++SFG++L EI++
Sbjct: 180 EAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEINYLGQLH 136
+G G FG+V+KG W + +AVK LN Q + + E+ L +
Sbjct: 36 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 82
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ +GY + +V ++ S+ +HL + F+ + + IA A G+
Sbjct: 83 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 138
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+LH+ +I+RD K++NI L + K+ DFGLA + SH ++ G+ + APE
Sbjct: 139 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 196
Query: 257 YLATGH---LTAKSDIYSFGVVLLEILSGR 283
+ + +SD+Y+FG+VL E+++G+
Sbjct: 197 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH---KEWLTEI 129
+F+ ++LG+G F V++ + TG+ +A+K ++++ + E+
Sbjct: 12 DFKVGNLLGKGSFAGVYR---------AESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV 62
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
QL HP++++L Y + ++ LV E G M +L R +P S +
Sbjct: 63 KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR---VKPFSENEARHFMH 119
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
G+ +LHS +++RD SN+LL N N K++DFGLA + H + + GT
Sbjct: 120 QIITGMLYLHSH--GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGT 175
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWA 301
Y +PE +SD++S G + +L GR D + N V A
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
+G G FG+V+KG W H + + ++ V E FQ + E+ L + H
Sbjct: 44 IGSGSFGTVYKGKW---HGDVAVK-----ILKVVDPTPEQFQAFR---NEVAVLRKTRHV 92
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N++ +GY + D+ +V ++ S+ HL + + FQ + IA A G+ +L
Sbjct: 93 NILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQ---LIDIARQTAQGMDYL 148
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
H+ +I+RD K++NI L K+ DFGLA S + G+ + APE +
Sbjct: 149 HAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI 206
Query: 259 ATGH---LTAKSDIYSFGVVLLEILSG 282
+ +SD+YS+G+VL E+++G
Sbjct: 207 RMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 131/284 (46%), Gaps = 45/284 (15%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYL 132
+ R + LG+G FG V+ G T GT +A+K L + G + +L E +
Sbjct: 185 SLRLEVKLGQGCFGEVWMG---------TWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVM 233
Query: 133 GQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAA 192
+L H LV+L + ++ +V E+M +GS+ + F +G + L + +A A
Sbjct: 234 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIA 290
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY-- 250
+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R +
Sbjct: 291 SGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 345
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ APE G T KSD++SFG++L E+ + R PY R
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVNR 388
Query: 311 IFRVLDPRLEGQFSLPQAQKAAS----LALQCLSVEPKLRPDMD 350
VLD ++E + +P + L QC EP+ RP +
Sbjct: 389 --EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEINYLGQLH 136
+G G FG+V+KG W + +AVK LN Q + + E+ L +
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 90
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ +GY + +V ++ S+ +HL + F+ + + IA A G+
Sbjct: 91 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 146
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+LH+ +I+RD K++NI L + K+ DFGLA + SH ++ G+ + APE
Sbjct: 147 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 204
Query: 257 YLATGH---LTAKSDIYSFGVVLLEILSGR 283
+ + +SD+Y+FG+VL E+++G+
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + L +P +AVK L + + + ++E+ + + H
Sbjct: 77 LGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRG------SYF------QPLSWSLRM 185
N++ L+G C +D ++ E+ +G++ +L R SY + LS +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A A G+ +L A K I+RD A N+L+ + K++DFGLARD D +T
Sbjct: 195 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV+L EI +
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK--RLNQEGFQGHKEWLT 127
+ NF+ +GEG +G V+K + TG ++A+K RL+ E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI+ L +L+HPN+VKL+ ++ LV+E + + + F S + L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKK---FMDASALTGIPLPLIKSY 111
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
GLAF HS +V++RD K N+L+++ KL+DFGLAR +++ V
Sbjct: 112 LFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 248 GTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE L + + DI+S G + E+++ RRA+
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL-HH 137
LGEG FG V + + +P + +AVK L + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR------------M 185
N++ L+G C +D ++ + +G++ +L R S+ + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
A G+ +L S K I+RD A N+L+ N K++DFGLARD D +T
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 246 VMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE L T +SD++SFGV++ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEINYLGQLH 136
+G G FG+V+KG W + +AVK LN Q + + E+ L +
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ +GY + +V ++ S+ +HL + F+ + + IA A G+
Sbjct: 63 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMD 118
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+LH+ +I+RD K++NI L + K+ DFGLA + SH ++ G+ + APE
Sbjct: 119 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 176
Query: 257 YLATGH---LTAKSDIYSFGVVLLEILSGR 283
+ + +SD+Y+FG+VL E+++G+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW-- 125
R +F VLG+G FG V + S R GT L AVK L ++ +
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKV---------MLSERKGTDELYAVKILKKDVVIQDDDVEC 66
Query: 126 -LTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
+ E L P + + C + RL V E++ G + H+ + G + +P +
Sbjct: 67 TMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY 126
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR----DGPTGDK 239
+IA+G L FL S +IYRD K N++LDS + K++DFG+ + DG T
Sbjct: 127 AAEIAIG----LFFLQSK--GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--- 177
Query: 240 SHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
+ GT Y APE +A D ++FGV+L E+L+G+
Sbjct: 178 ---TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 131/284 (46%), Gaps = 45/284 (15%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYL 132
+ R + LG+G FG V+ G T GT +A+K L + G + +L E +
Sbjct: 185 SLRLEVKLGQGCFGEVWMG---------TWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVM 233
Query: 133 GQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAA 192
+L H LV+L + ++ +V E+M +GS+ + F +G + L + +A A
Sbjct: 234 KKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIA 290
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY-- 250
+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R +
Sbjct: 291 SGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPI 345
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ APE G T KSD++SFG++L E+ + R PY R
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVNR 388
Query: 311 IFRVLDPRLEGQFSLPQAQKAAS----LALQCLSVEPKLRPDMD 350
VLD ++E + +P + L QC EP+ RP +
Sbjct: 389 --EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 70 ATRNFRPDS---VLGE-GGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW 125
TR+ P+ ++GE G FG V+K E T +L A K ++ + + +++
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELEDY 54
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRM 185
+ EI+ L HPN+VKL+ +++ ++ EF G+++ + +PL+ S
Sbjct: 55 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQ 111
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR 245
+ + L +LH + K+I+RD KA NIL + + KL+DFG++ ++ + R
Sbjct: 112 VVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTXIQRR 166
Query: 246 --VMGTYGYAAPEYLATGH-----LTAKSDIYSFGVVLLEI 279
+GT + APE + K+D++S G+ L+E+
Sbjct: 167 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 107/230 (46%), Gaps = 14/230 (6%)
Query: 60 KNFSYSDLRTATR-NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE- 117
K S SDL+ R N LG G FG V++G V S P + + +AVK L +
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQV---SGMPNDP-SPLQVAVKTLPEVC 73
Query: 118 GFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFR-RGSYF 176
Q ++L E + + +H N+V+ +G L+ R ++ E M G +++ L R
Sbjct: 74 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 177 QPLSWSLR--MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLA 231
QP S ++ + +A A G +L E I+RD A N LL AK+ DFG+A
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+D M + PE G T+K+D +SFGV+L EI S
Sbjct: 192 QDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 27/218 (12%)
Query: 73 NFRPDSVLGEGGFGSVFKG-W--VDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI 129
+ R + LG+G FG V+ G W ++ + +PGT ++ E F L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAF------LQEA 64
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ ++ H LV+L + ++ +V E+M +GS+ + F +G + L + +A
Sbjct: 65 QVMKKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAA 121
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R
Sbjct: 122 QIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAK 176
Query: 250 Y--GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRA 285
+ + APE G T KSD++SFG++L E+ + R
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 51/287 (17%)
Query: 73 NFRPDSVLGEGGFGSVFKG-W--VDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI 129
+ R + LG+G FG V+ G W ++ + +PGT ++ E F L E
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAF------LQEA 61
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L H LV+L + ++ +V E+M +GS+ + F +G + L + ++
Sbjct: 62 QVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLD--FLKGETGKYLRLPQLVDMSA 118
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R
Sbjct: 119 QIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAK 173
Query: 250 Y--GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTS 307
+ + APE G T KSD++SFG++L E+ + R PY
Sbjct: 174 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGM 216
Query: 308 KRRIFRVLDPRLEGQFSLPQAQKAAS----LALQCLSVEPKLRPDMD 350
R VLD ++E + +P + L QC EP+ RP +
Sbjct: 217 VNR--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 73 NFRPDSVLGEGGFGSVFKG-W--VDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI 129
+ R + LG+G FG V+ G W ++ + +PGT ++ E F L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAF------LQEA 64
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L H LV+L + ++ +V E+M +GS+ + F +G + L + +A
Sbjct: 65 QVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAA 121
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A+G+A++ ++RD A+NIL+ N K++DFGLAR + + + R
Sbjct: 122 QIASGMAYVERM--NYVHRDLAAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAK 176
Query: 250 Y--GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRA 285
+ + APE G T KSD++SFG++L E+ + R
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 73 NFRPDSVLGEGGFGSVFKG-W--VDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI 129
+ R + LG+G FG V+ G W ++ + +PGT ++ E F L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAF------LQEA 64
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L H LV+L + ++ +V E+M +G + + F +G + L + +A
Sbjct: 65 QVMKKLRHEKLVQLYA-VVSEEPIYIVMEYMSKGCLLD--FLKGEMGKYLRLPQLVDMAA 121
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R
Sbjct: 122 QIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAK 176
Query: 250 Y--GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRA 285
+ + APE G T KSD++SFG++L E+ + R
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEINYLGQLH 136
+G G FG+V+KG W + +AVK LN Q + + E+ L +
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ +GY + +V ++ S+ +HL + F+ + IA A G+
Sbjct: 79 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFE---MKKLIDIARQTARGMD 134
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+LH+ +I+RD K++NI L + K+ DFGLA + SH ++ G+ + APE
Sbjct: 135 YLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 257 YL---ATGHLTAKSDIYSFGVVLLEILSGR 283
+ + + +SD+Y+FG+VL E+++G+
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 51/287 (17%)
Query: 73 NFRPDSVLGEGGFGSVFKG-W--VDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI 129
+ R + LG+G FG V+ G W ++ + +PGT ++ E F L E
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAF------LQEA 61
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L H LV+L + ++ +V E+M +GS+ + F +G + L + ++
Sbjct: 62 QVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLD--FLKGETGKYLRLPQLVDMSA 118
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R
Sbjct: 119 QIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEWTARQGAK 173
Query: 250 Y--GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTS 307
+ + APE G T KSD++SFG++L E+ + R PY
Sbjct: 174 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGM 216
Query: 308 KRRIFRVLDPRLEGQFSLPQAQKAAS----LALQCLSVEPKLRPDMD 350
R VLD ++E + +P + L QC EP+ RP +
Sbjct: 217 VNR--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINY 131
+F S LG G G VFK S +P +G+++A K ++ E + + E+
Sbjct: 69 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 119
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGA 191
L + + P +V G D + E M GS++ L + G + + K+++
Sbjct: 120 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 175
Query: 192 ANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYG 251
GL +L K+++RD K SNIL++S KL DFG++ G D ++ +GT
Sbjct: 176 IKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 230
Query: 252 YAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y +PE L H + +SDI+S G+ L+E+ GR I
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 73 NFRPDSVLGEGGFGSVFKG-W--VDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI 129
+ R + LG+G FG V+ G W ++ + +PGT ++ E F L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAF------LQEA 64
Query: 130 NYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L H LV+L + ++ +V E+M +G + + F +G + L + +A
Sbjct: 65 QVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGCLLD--FLKGEMGKYLRLPQLVDMAA 121
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A+G+A++ ++RD +A+NIL+ N K++DFGLAR + + + R
Sbjct: 122 QIASGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAK 176
Query: 250 Y--GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRA 285
+ + APE G T KSD++SFG++L E+ + R
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEINYLGQLH 136
+G G FG+V+KG W + +AVK LN Q + + E+ L +
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ +GY +V ++ S+ +HL + F+ + IA A G+
Sbjct: 79 HVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFE---MKKLIDIARQTARGMD 134
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+LH+ +I+RD K++NI L + K+ DFGLA + SH ++ G+ + APE
Sbjct: 135 YLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 257 YL---ATGHLTAKSDIYSFGVVLLEILSGR 283
+ + + +SD+Y+FG+VL E+++G+
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEINYLGQLH 136
+G G FG+V+KG W + +AVK LN Q + + E+ L +
Sbjct: 43 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 89
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ +GY + +V ++ S+ +HL + F+ + + IA A G+
Sbjct: 90 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 145
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+LH+ +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 146 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 203
Query: 257 YLATGH---LTAKSDIYSFGVVLLEILSGR 283
+ + +SD+Y+FG+VL E+++G+
Sbjct: 204 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 26/230 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE-WLTEINYLGQLHHP 138
LG GGFG V + W+ + TG +A+K+ QE ++E W EI + +L+HP
Sbjct: 22 LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAA 192
N+V + +D LL E+ G + +L + + +R ++ +
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DIS 131
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLD---SNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH E ++I+RD K NI+L K+ D G A++ D+ + T +GT
Sbjct: 132 SALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGT 186
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKN-RPTGEHNLV 298
Y APE L T D +SFG + E ++G R N +P H V
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 236
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 26/230 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE-WLTEINYLGQLHHP 138
LG GGFG V + W+ + TG +A+K+ QE ++E W EI + +L+HP
Sbjct: 23 LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAA 192
N+V + +D LL E+ G + +L + + +R ++ +
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DIS 132
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLD---SNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH E ++I+RD K NI+L K+ D G A++ D+ + T +GT
Sbjct: 133 SALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGT 187
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKN-RPTGEHNLV 298
Y APE L T D +SFG + E ++G R N +P H V
Sbjct: 188 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 237
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEINYLGQLH 136
+G G FG+V+KG W + +AVK LN Q + + E+ L +
Sbjct: 18 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 64
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ +GY + +V ++ S+ +HL + F+ + + IA A G+
Sbjct: 65 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMD 120
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+LH+ +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 121 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 178
Query: 257 YLATGH---LTAKSDIYSFGVVLLEILSGR 283
+ + +SD+Y+FG+VL E+++G+
Sbjct: 179 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEINYLGQLH 136
+G G FG+V+KG W + +AVK LN Q + + E+ L +
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 90
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ +GY + +V ++ S+ +HL + F+ + + IA A G+
Sbjct: 91 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 146
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+LH+ +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 147 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 204
Query: 257 YLATGH---LTAKSDIYSFGVVLLEILSGR 283
+ + +SD+Y+FG+VL E+++G+
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
R VLG G FG+V+KG W+ + + +A+K L + + +KE L E
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGE------NVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLF----RRGSYFQPLSWSLRMK 186
+ + P + +L+G CL +L V + MP G + +H+ R GS L+W +++
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQ-DLLNWCMQI- 128
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+++L ++++RD A N+L+ S + K++DFGLAR + + +
Sbjct: 129 -----AKGMSYLEDV--RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGG 181
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 182 KVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINY 131
+F S LG G G VFK S +P +G+++A K ++ E + + E+
Sbjct: 34 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 84
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGA 191
L + + P +V G D + E M GS++ L + G + + K+++
Sbjct: 85 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 140
Query: 192 ANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYG 251
GL +L K+++RD K SNIL++S KL DFG++ G D ++ +GT
Sbjct: 141 IKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 195
Query: 252 YAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y +PE L H + +SDI+S G+ L+E+ GR I
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEINYLGQLH 136
+G G FG+V+KG W + +AVK LN Q + + E+ L +
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ +GY + +V ++ S+ +HL + F+ + + IA A G+
Sbjct: 68 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMD 123
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+LH+ +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 124 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 257 YLATGH---LTAKSDIYSFGVVLLEILSGR 283
+ + +SD+Y+FG+VL E+++G+
Sbjct: 182 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
D LG G FG+V KG+ + + + I N + E L E N + QL
Sbjct: 374 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 428
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
+P +V+++G C E + +LV E G + +L + L ++++G +
Sbjct: 429 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 483
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAA 254
+L E ++RD A N+LL + + AK+SDFGL++ D+++ + G + + A
Sbjct: 484 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 540
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILS 281
PE + ++KSD++SFGV++ E S
Sbjct: 541 PECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 36/276 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLN-QEGFQGHKEWLTEINYLGQLHHP 138
+G+G FG VFKG +D T ++A+K ++ +E ++ EI L Q
Sbjct: 31 IGKGSFGEVFKG-IDNR--------TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
+ K G L+ ++ E++ GS + L R F + +K L GL +L
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEIL---KGLDYL 136
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
HS K I+RD KA+N+LL + KL+DFG+A G D +GT + APE +
Sbjct: 137 HSE--KKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVI 192
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPR 318
+K+DI+S G+ +E+ G P L+ P P
Sbjct: 193 QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------------PT 239
Query: 319 LEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
L G F+ + CL+ +P RP E++K
Sbjct: 240 LVGDFT----KSFKEFIDACLNKDPSFRPTAKELLK 271
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
D LG G FG+V KG+ + + + I N + E L E N + QL
Sbjct: 375 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 429
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
+P +V+++G C E + +LV E G + +L + L ++++G +
Sbjct: 430 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 484
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAA 254
+L E ++RD A N+LL + + AK+SDFGL++ D+++ + G + + A
Sbjct: 485 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 541
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILS 281
PE + ++KSD++SFGV++ E S
Sbjct: 542 PECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWLTEINYLGQLH 136
LG+G FG+V+ LA R + ++A+K L + + + E+ L
Sbjct: 20 LGKGKFGNVY--------LARERQ-SKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
HPN+++L GY + L+ E+ P G++ L + + + + + ++A N L+
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELA----NALS 126
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+ HS +VI+RD K N+LL SN K++DFG + P+ + T + GT Y PE
Sbjct: 127 YCHSK--RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE 180
Query: 257 YLATGHLTAKSDIYSFGVVLLEILSG 282
+ K D++S GV+ E L G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEINYLGQLH 136
+G G FG+V+KG W + +AVK LN Q + + E+ L +
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ +GY + +V ++ S+ +HL + F+ + + IA A G+
Sbjct: 68 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMD 123
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+LH+ +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 124 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 257 YLATGH---LTAKSDIYSFGVVLLEILSGR 283
+ + +SD+Y+FG+VL E+++G+
Sbjct: 182 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 133/297 (44%), Gaps = 46/297 (15%)
Query: 63 SYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH 122
S D R ++ LG G FG V G EH L TG +AVK LN++ +
Sbjct: 2 SKHDGRVKIGHYVLGDTLGVGTFGKVKIG---EHQL------TGHKVAVKILNRQKIRSL 52
Query: 123 K---EWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPL 179
+ EI L HP+++KL +V E++ G + +++ + G +
Sbjct: 53 DVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME 112
Query: 180 SWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDK 239
+ L +I L A + + V++RD K N+LLD++ NAK++DFGL+ G+
Sbjct: 113 ARRLFQQI-LSAVD-----YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166
Query: 240 SHVSTRVMGTYGYAAPEYLATGHLTA--KSDIYSFGVVLLEILSGRRAIDKNRPTGEHNL 297
S G+ YAAPE + +G L A + DI+S GV+L +L G D EH
Sbjct: 167 LRTSC---GSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDD-----EH-- 215
Query: 298 VEWAKPYLTSKRRIFRVLDPRLEGQFSLPQA--QKAASLALQCLSVEPKLRPDMDEV 352
P L K R G F +P+ + A+L + L V+P R + ++
Sbjct: 216 ----VPTLFKKIR---------GGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEINYLGQLH 136
+G G FG+V+KG W + +AVK LN Q + + E+ L +
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ +GY + +V ++ S+ +HL + F+ + + IA A G+
Sbjct: 63 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMD 118
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+LH+ +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 119 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 257 YLATGH---LTAKSDIYSFGVVLLEILSGR 283
+ + +SD+Y+FG+VL E+++G+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 46/233 (19%)
Query: 69 TATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLT 127
+++ F+ LG G + +V+KG L T TG+ +A+K + + +G +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKG------LNKT---TGVYVALKEVKLDSEEGTPSTAIR 52
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFM----------------PRGSMENHLFR 171
EI+ + +L H N+V+L ++ LV+EFM PRG +E +L +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRG-LELNLVK 111
Query: 172 RGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLA 231
YFQ W L GLAF H E K+++RD K N+L++ KL DFGLA
Sbjct: 112 ---YFQ---WQL--------LQGLAFCH--ENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGR 283
R G + + + T Y AP+ L + S DI+S G +L E+++G+
Sbjct: 156 R--AFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINY 131
+F S LG G G VFK S +P +G+++A K ++ E + + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGA 191
L + + P +V G D + E M GS++ L + G + + K+++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 113
Query: 192 ANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYG 251
GL +L K+++RD K SNIL++S KL DFG++ G D ++ +GT
Sbjct: 114 IKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 252 YAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y +PE L H + +SDI+S G+ L+E+ GR I
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 19/212 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINY 131
+F S LG G G VFK S +P +G+++A K ++ E + + + E+
Sbjct: 10 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 60
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGA 191
L + + P +V G D + E M GS++ L + G + + K+++
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 116
Query: 192 ANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYG 251
GL +L K+++RD K SNIL++S KL DFG++ G D+ ++ +GT
Sbjct: 117 IKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANEFVGTRS 171
Query: 252 YAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
Y +PE L H + +SDI+S G+ L+E+ GR
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINY 131
+F S LG G G VFK S +P +G+++A K ++ E + + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGA 191
L + + P +V G D + E M GS++ L + G + + K+++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 113
Query: 192 ANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYG 251
GL +L K+++RD K SNIL++S KL DFG++ G D ++ +GT
Sbjct: 114 IKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 252 YAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y +PE L H + +SDI+S G+ L+E+ GR I
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 137/320 (42%), Gaps = 54/320 (16%)
Query: 43 LPQTPRSEGEILQSSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTR 102
L Q R E + Q + D F S LG G G VFK S +
Sbjct: 3 LQQRKRLEAFLTQKQKVGELKDDD-------FEKISELGAGNGGVVFK--------VSHK 47
Query: 103 PGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMP 161
P +G+++A K ++ E + + + E+ L + + P +V G D + E M
Sbjct: 48 P-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 106
Query: 162 RGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNY 221
GS++ L + G + + K+++ GL +L K+++RD K SNIL++S
Sbjct: 107 GGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLREKH-KIMHRDVKPSNILVNSRG 161
Query: 222 NAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
KL DFG++ G D ++ +GT Y +PE L H + +SDI+S G+ L+E+
Sbjct: 162 EIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 217
Query: 282 GRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLD-------PRL-EGQFSLPQAQKAAS 333
GR I + IF +LD P+L G FSL +
Sbjct: 218 GRYPIGSG----------------SGSMAIFELLDYIVNEPPPKLPSGVFSL----EFQD 257
Query: 334 LALQCLSVEPKLRPDMDEVV 353
+CL P R D+ +++
Sbjct: 258 FVNKCLIKNPAERADLKQLM 277
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
D LG G FG+V KG+ + + + I N + E L E N + QL
Sbjct: 32 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 86
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
+P +V+++G C E + +LV E G + +L + L ++++G +
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 141
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAA 254
+L E ++RD A N+LL + + AK+SDFGL++ D+++ + G + + A
Sbjct: 142 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 198
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILS 281
PE + ++KSD++SFGV++ E S
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
D LG G FG+V KG+ + + + I N + E L E N + QL
Sbjct: 32 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 86
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
+P +V+++G C E + +LV E G + +L + L ++++G +
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 141
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAA 254
+L E ++RD A N+LL + + AK+SDFGL++ D+++ + G + + A
Sbjct: 142 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 198
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILS 281
PE + ++KSD++SFGV++ E S
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEINYLGQLH 136
+G G FG+V+KG W + +AVK LN Q + + E+ L +
Sbjct: 20 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 66
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ +GY + +V ++ S+ +HL + F+ + IA A G+
Sbjct: 67 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFE---MKKLIDIARQTARGMD 122
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+LH+ +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 123 YLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 180
Query: 257 YL---ATGHLTAKSDIYSFGVVLLEILSGR 283
+ + + +SD+Y+FG+VL E+++G+
Sbjct: 181 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL--NQEGFQGHKEWLTEINYLGQLH 136
++GEG +G V K TG ++A+K+ + + K + EI L QL
Sbjct: 32 LVGEGSYGMVMK---------CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMEN-HLFRRGSYFQPLSWSLRMKIALGAANGL 195
H NLV L+ C + LV+EF+ +++ LF G L + + K NG+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGI 137
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAP 255
F HS +I+RD K NIL+ + KL DFG AR V + T Y AP
Sbjct: 138 GFCHSH--NIIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAP 193
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSG 282
E L K+ D+++ G ++ E+ G
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
D LG G FG+V KG+ + + + I N + E L E N + QL
Sbjct: 30 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 84
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
+P +V+++G C E + +LV E G + +L + L ++++G +
Sbjct: 85 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 139
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAA 254
+L E ++RD A N+LL + + AK+SDFGL++ D+++ + G + + A
Sbjct: 140 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 196
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILS 281
PE + ++KSD++SFGV++ E S
Sbjct: 197 PECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTE----INYLGQL 135
LG G FG V V+ + + M +AVK L +E L ++YLG
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-- 100
Query: 136 HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWS------------- 182
+H N+V L+G C L++ E+ G + N L R+ F S
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 183 -LRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH 241
+ + A G+AFL A I+RD A NILL K+ DFGLARD
Sbjct: 161 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
V + APE + T +SD++S+G+ L E+ S
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 24/215 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK---EWLTEINYLGQLH 136
LG G FG V G +H L TG +AVK LN++ + + EI L
Sbjct: 24 LGVGTFGKVKVG---KHEL------TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
HP+++KL +V E++ G + +++ + G + S L +I +G+
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQIL----SGVD 130
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+ H V++RD K N+LLD++ NAK++DFGL+ G+ S G+ YAAPE
Sbjct: 131 YCHRH--MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE 185
Query: 257 YLATGHLTA--KSDIYSFGVVLLEILSGRRAIDKN 289
+ +G L A + DI+S GV+L +L G D +
Sbjct: 186 VI-SGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L++ + MP G + +++ GS + L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 126
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 127 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 73
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L++ + MP G + +++ GS + L+W +++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 130
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 131 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 70
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L++ + MP G + +++ GS + L+W +++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 127
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 128 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L++ + MP G + +++ GS + L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 128
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 129 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF--QGHKEWLTEINYLGQLH 136
+G G FG+V+KG W + +AVK LN Q + + E+ L +
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ +GY +V ++ S+ +HL + F+ + + IA A G+
Sbjct: 63 HVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMD 118
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+LH+ +I+RD K++NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 119 YLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 257 YLATGH---LTAKSDIYSFGVVLLEILSGR 283
+ + +SD+Y+FG+VL E+++G+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYL 132
+ R + LG+G FG V+ G T GT +A+K L + G + +L E +
Sbjct: 186 SLRLEVKLGQGCFGEVWMG---------TWNGTTR-VAIKTL-KPGNMSPEAFLQEAQVM 234
Query: 133 GQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAA 192
+L H LV+L + ++ +V E+M +GS+ + F +G + L + +A A
Sbjct: 235 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIA 291
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY-- 250
+G+A++ ++RD +A+NIL+ N K++DFGL R + + + R +
Sbjct: 292 SGMAYVERM--NYVHRDLRAANILVGENLVCKVADFGLGR---LIEDNEYTARQGAKFPI 346
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRA 285
+ APE G T KSD++SFG++L E+ + R
Sbjct: 347 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 381
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
D LG G FG+V KG+ + + + I N + E L E N + QL
Sbjct: 22 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 76
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
+P +V+++G C E + +LV E G + +L + L ++++G +
Sbjct: 77 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 131
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAA 254
+L E ++RD A N+LL + + AK+SDFGL++ D+++ + G + + A
Sbjct: 132 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 188
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILS 281
PE + ++KSD++SFGV++ E S
Sbjct: 189 PECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 72
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L++ + MP G + +++ GS + L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 129
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 130 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 18/213 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI--N 130
F VLG+G FG VF V + S + R L A+K L + + T++ +
Sbjct: 25 QFELLKVLGQGSFGKVF--LVKKISGSDAR----QLYAMKVLKKATLKVRDRVRTKMERD 78
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L +++HP +VKL Y + + +L L+ +F+ G + L + + + +K L
Sbjct: 79 ILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE-----DVKFYL 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A LA H +IYRD K NILLD + KL+DFGL+++ +K S GT
Sbjct: 133 -AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGT 189
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y APE + T +D +SFGV++ E+L+G
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINY 131
+F S LG G G VFK S +P +G+++A K ++ E + + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGA 191
L + + P +V G D + E M GS++ L + G + + K+++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 113
Query: 192 ANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYG 251
GL +L K+++RD K SNIL++S KL DFG++ G D ++ +GT
Sbjct: 114 IKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 252 YAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y +PE L H + +SDI+S G+ L+E+ GR I
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINY 131
+F S LG G G VFK S +P +G+++A K ++ E + + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGA 191
L + + P +V G D + E M GS++ L + G + + K+++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 113
Query: 192 ANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYG 251
GL +L K+++RD K SNIL++S KL DFG++ G D ++ +GT
Sbjct: 114 IKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 252 YAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y +PE L H + +SDI+S G+ L+E+ GR I
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 79
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 136
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 137 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 18/213 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI--N 130
F VLG+G FG VF V + S + R L A+K L + + T++ +
Sbjct: 25 QFELLKVLGQGSFGKVF--LVKKISGSDAR----QLYAMKVLKKATLKVRDRVRTKMERD 78
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L +++HP +VKL Y + + +L L+ +F+ G + L + + + +K L
Sbjct: 79 ILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE-----DVKFYL 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A LA H +IYRD K NILLD + KL+DFGL+++ +K S GT
Sbjct: 133 -AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGT 189
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y APE + T +D +SFGV++ E+L+G
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 126
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 127 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
D LG G FG+V KG+ + + + I N + E L E N + QL
Sbjct: 12 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 66
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
+P +V+++G C E + +LV E G + +L + L ++++G +
Sbjct: 67 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 121
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAA 254
+L E ++RD A N+LL + + AK+SDFGL++ D+++ + G + + A
Sbjct: 122 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 178
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILS 281
PE + ++KSD++SFGV++ E S
Sbjct: 179 PECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 28/223 (12%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
LG G FG V G W ++ +A ++ +EG E++ E + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAI------------KMIKEGSMSEDEFIEEAKVMMNLSHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L G C + ++ E+M G + N+L FQ +++ + +L
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYL 121
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT---YGYAAP 255
S + ++RD A N L++ K+SDFGL+R D + S+R G+ ++ P
Sbjct: 122 ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSSR--GSKFPVRWSPP 175
Query: 256 EYLATGHLTAKSDIYSFGVVLLEILS-GRRAIDK--NRPTGEH 295
E L ++KSDI++FGV++ EI S G+ ++ N T EH
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH 218
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 18/213 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEI--N 130
F VLG+G FG VF V + S + R L A+K L + + T++ +
Sbjct: 26 QFELLKVLGQGSFGKVF--LVKKISGSDAR----QLYAMKVLKKATLKVRDRVRTKMERD 79
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L +++HP +VKL Y + + +L L+ +F+ G + L + + + +K L
Sbjct: 80 ILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE-----DVKFYL 133
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
A LA H +IYRD K NILLD + KL+DFGL+++ +K S GT
Sbjct: 134 -AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGT 190
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y APE + T +D +SFGV++ E+L+G
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 11/183 (6%)
Query: 109 IAVKRLNQEGFQ-GHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMEN 167
+A+KR+N E Q E L EI + Q HHPN+V + D LV + + GS+ +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 168 ---HLFRRGSYFQ-PLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNA 223
H+ +G + L S I GL +LH I+RD KA NILL + +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSV 160
Query: 224 KLSDFGLARDGPTG---DKSHVSTRVMGTYGYAAPEYLATGH-LTAKSDIYSFGVVLLEI 279
+++DFG++ TG ++ V +GT + APE + K+DI+SFG+ +E+
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
Query: 280 LSG 282
+G
Sbjct: 221 ATG 223
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 70
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L++ + MP G + +++ GS + L+W +++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYL-LNWCVQI- 127
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 128 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTE----INYLGQL 135
LG G FG V V+ + + M +AVK L +E L ++YLG
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-- 84
Query: 136 HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWS------------- 182
+H N+V L+G C L++ E+ G + N L R+ F S
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 183 -LRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH 241
+ + A G+AFL A I+RD A NILL K+ DFGLARD
Sbjct: 145 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
V + APE + T +SD++S+G+ L E+ S
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
D LG G FG+V KG+ + + + I N + E L E N + QL
Sbjct: 10 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 64
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
+P +V+++G C E + +LV E G + +L + L ++++G +
Sbjct: 65 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 119
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAA 254
+L E ++RD A N+LL + + AK+SDFGL++ D+++ + G + + A
Sbjct: 120 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 176
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILS 281
PE + ++KSD++SFGV++ E S
Sbjct: 177 PECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTE----INYLGQL 135
LG G FG V V+ + + M +AVK L +E L ++YLG
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-- 102
Query: 136 HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWS------------- 182
+H N+V L+G C L++ E+ G + N L R+ F S
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 183 -LRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH 241
+ + A G+AFL A I+RD A NILL K+ DFGLARD
Sbjct: 163 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
V + APE + T +SD++S+G+ L E+ S
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
D LG G FG+V KG+ + + + I N + E L E N + QL
Sbjct: 16 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 70
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
+P +V+++G C E + +LV E G + +L + L ++++G +
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 125
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAA 254
+L E ++RD A N+LL + + AK+SDFGL++ D+++ + G + + A
Sbjct: 126 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 182
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILS 281
PE + ++KSD++SFGV++ E S
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 72
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 129
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 130 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTE----INYLGQL 135
LG G FG V V+ + + M +AVK L +E L ++YLG
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-- 107
Query: 136 HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWS------------- 182
+H N+V L+G C L++ E+ G + N L R+ F S
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 183 -LRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH 241
+ + A G+AFL A I+RD A NILL K+ DFGLARD
Sbjct: 168 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
V + APE + T +SD++S+G+ L E+ S
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 126
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 127 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 27/210 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL----NQEGFQGHKEWLTEINYLGQL 135
+GEG +G V+K + G ++A+KR+ EG + EI+ L +L
Sbjct: 29 VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 136 HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL-GAANG 194
HHPN+V L+ + LV+EFM + ++ L + Q ++KI L G
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ----DSQIKIYLYQLLRG 131
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAA 254
+A H + ++++RD K N+L++S+ KL+DFGLAR +S+ T + T Y A
Sbjct: 132 VA--HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRA 187
Query: 255 PEYL-ATGHLTAKSDIYSFGVVLLEILSGR 283
P+ L + + DI+S G + E+++G+
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 128
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 129 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 11/183 (6%)
Query: 109 IAVKRLNQEGFQ-GHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMEN 167
+A+KR+N E Q E L EI + Q HHPN+V + D LV + + GS+ +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 168 ---HLFRRGSYFQ-PLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNA 223
H+ +G + L S I GL +LH I+RD KA NILL + +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSV 155
Query: 224 KLSDFGLARDGPTG---DKSHVSTRVMGTYGYAAPEYLATGH-LTAKSDIYSFGVVLLEI 279
+++DFG++ TG ++ V +GT + APE + K+DI+SFG+ +E+
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
Query: 280 LSG 282
+G
Sbjct: 216 ATG 218
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 76
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 133
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 134 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 27/210 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL----NQEGFQGHKEWLTEINYLGQL 135
+GEG +G V+K + G ++A+KR+ EG + EI+ L +L
Sbjct: 29 VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 136 HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL-GAANG 194
HHPN+V L+ + LV+EFM + ++ L + Q ++KI L G
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ----DSQIKIYLYQLLRG 131
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAA 254
+A H + ++++RD K N+L++S+ KL+DFGLAR +S+ T + T Y A
Sbjct: 132 VA--HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRA 187
Query: 255 PEYL-ATGHLTAKSDIYSFGVVLLEILSGR 283
P+ L + + DI+S G + E+++G+
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 72
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 129
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 130 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 72
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 129
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 130 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 63
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 120
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 121 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 75
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 132
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 133 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 94
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 151
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 152 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYL-LNWCVQI- 126
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 127 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 66
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 123
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 124 -----AEGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 177 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 55/255 (21%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE-----GFQGHKEWLT 127
N++ LGEG FG V + TG +A+K +N++ QG E
Sbjct: 5 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 53
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEF---------MPRGSMENHLFRRGSYFQP 178
EI+YL L HP+++KL D ++V E+ + R M RR +FQ
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR--FFQQ 111
Query: 179 LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGD 238
+ + + + H K+++RD K N+LLD + N K++DFGL+ G+
Sbjct: 112 I------------ISAVEYCHRH--KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 157
Query: 239 KSHVSTRVMGTYGYAAPEYLATGHLTA--KSDIYSFGVVLLEILSGRRAID--------K 288
S G+ YAAPE + +G L A + D++S GV+L +L R D K
Sbjct: 158 FLKTSC---GSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 213
Query: 289 NRPTGEHNLVEWAKP 303
N G + L ++ P
Sbjct: 214 NISNGVYTLPKFLSP 228
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 55/255 (21%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE-----GFQGHKEWLT 127
N++ LGEG FG V + TG +A+K +N++ QG E
Sbjct: 15 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 63
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEF---------MPRGSMENHLFRRGSYFQP 178
EI+YL L HP+++KL D ++V E+ + R M RR +FQ
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR--FFQQ 121
Query: 179 LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGD 238
+ + + + H K+++RD K N+LLD + N K++DFGL+ G+
Sbjct: 122 I------------ISAVEYCHRH--KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 167
Query: 239 KSHVSTRVMGTYGYAAPEYLATGHLTA--KSDIYSFGVVLLEILSGRRAID--------K 288
S G+ YAAPE + +G L A + D++S GV+L +L R D K
Sbjct: 168 FLKTSC---GSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 223
Query: 289 NRPTGEHNLVEWAKP 303
N G + L ++ P
Sbjct: 224 NISNGVYTLPKFLSP 238
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
LG G FG V G W ++ +A ++ +EG E++ E + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAI------------KMIKEGSMSEDEFIEEAKVMMNLSHE 79
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L G C + ++ E+M G + N+L FQ +++ + +L
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYL 136
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
S + ++RD A N L++ K+SDFGL+R D+ S ++ PE L
Sbjct: 137 ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEETSSVGSKFPVRWSPPEVL 193
Query: 259 ATGHLTAKSDIYSFGVVLLEILS-GRRAIDK--NRPTGEH 295
++KSDI++FGV++ EI S G+ ++ N T EH
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH 233
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 133/297 (44%), Gaps = 46/297 (15%)
Query: 63 SYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH 122
S D R ++ LG G FG V G EH L TG +AVK LN++ +
Sbjct: 2 SKHDGRVKIGHYVLGDTLGVGTFGKVKIG---EHQL------TGHKVAVKILNRQKIRSL 52
Query: 123 K---EWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPL 179
+ EI L HP+++KL +V E++ G + +++ + G +
Sbjct: 53 DVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME 112
Query: 180 SWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDK 239
+ L +I L A + + V++RD K N+LLD++ NAK++DFGL+ G+
Sbjct: 113 ARRLFQQI-LSAVD-----YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166
Query: 240 SHVSTRVMGTYGYAAPEYLATGHLTA--KSDIYSFGVVLLEILSGRRAIDKNRPTGEHNL 297
S G+ YAAPE + +G L A + DI+S GV+L +L G D EH
Sbjct: 167 LRDSC---GSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDD-----EH-- 215
Query: 298 VEWAKPYLTSKRRIFRVLDPRLEGQFSLPQA--QKAASLALQCLSVEPKLRPDMDEV 352
P L K R G F +P+ + A+L + L V+P R + ++
Sbjct: 216 ----VPTLFKKIR---------GGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 55/255 (21%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE-----GFQGHKEWLT 127
N++ LGEG FG V + TG +A+K +N++ QG E
Sbjct: 14 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 62
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEF---------MPRGSMENHLFRRGSYFQP 178
EI+YL L HP+++KL D ++V E+ + R M RR +FQ
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR--FFQQ 120
Query: 179 LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGD 238
+ + + + H K+++RD K N+LLD + N K++DFGL+ G+
Sbjct: 121 I------------ISAVEYCHRH--KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166
Query: 239 KSHVSTRVMGTYGYAAPEYLATGHLTA--KSDIYSFGVVLLEILSGRRAID--------K 288
S G+ YAAPE + +G L A + D++S GV+L +L R D K
Sbjct: 167 FLKTSC---GSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 222
Query: 289 NRPTGEHNLVEWAKP 303
N G + L ++ P
Sbjct: 223 NISNGVYTLPKFLSP 237
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
LG G FG V G W ++ +A ++ +EG E++ E + L H
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAI------------KMIKEGSMSEDEFIEEAKVMMNLSHE 59
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L G C + ++ E+M G + N+L FQ +++ + +L
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYL 116
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
S + ++RD A N L++ K+SDFGL+R D+ S ++ PE L
Sbjct: 117 ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVL 173
Query: 259 ATGHLTAKSDIYSFGVVLLEILS-GRRAIDK--NRPTGEH 295
++KSDI++FGV++ EI S G+ ++ N T EH
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 55/255 (21%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE-----GFQGHKEWLT 127
N++ LGEG FG V + TG +A+K +N++ QG E
Sbjct: 9 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 57
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEF---------MPRGSMENHLFRRGSYFQP 178
EI+YL L HP+++KL D ++V E+ + R M RR +FQ
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR--FFQQ 115
Query: 179 LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGD 238
+ + + + H K+++RD K N+LLD + N K++DFGL+ G+
Sbjct: 116 I------------ISAVEYCHRH--KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 161
Query: 239 KSHVSTRVMGTYGYAAPEYLATGHLTA--KSDIYSFGVVLLEILSGRRAID--------K 288
S G+ YAAPE + +G L A + D++S GV+L +L R D K
Sbjct: 162 FLKTSC---GSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 217
Query: 289 NRPTGEHNLVEWAKP 303
N G + L ++ P
Sbjct: 218 NISNGVYTLPKFLSP 232
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 22/206 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWLTEINYLGQLH 136
LG+G FG+V+ LA R + ++A+K L + + + E+ L
Sbjct: 20 LGKGKFGNVY--------LARERQ-SKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
HPN+++L GY + L+ E+ P G++ L + + + + + ++A N L+
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELA----NALS 126
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+ HS +VI+RD K N+LL SN K++DFG + P+ + + GT Y PE
Sbjct: 127 YCHSK--RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC----GTLDYLPPE 180
Query: 257 YLATGHLTAKSDIYSFGVVLLEILSG 282
+ K D++S GV+ E L G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
LG G FG V G W ++ +A ++ +EG E++ E + L H
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAI------------KMIKEGSMSEDEFIEEAKVMMNLSHE 63
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L G C + ++ E+M G + N+L FQ +++ + +L
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYL 120
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
S + ++RD A N L++ K+SDFGL+R D+ S ++ PE L
Sbjct: 121 ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVL 177
Query: 259 ATGHLTAKSDIYSFGVVLLEILS-GRRAIDK--NRPTGEH 295
++KSDI++FGV++ EI S G+ ++ N T EH
Sbjct: 178 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH 217
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 129/290 (44%), Gaps = 34/290 (11%)
Query: 61 NFSYSDLRTATRN-FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF 119
+ + + + T+N FR VLG+GGFG V A TG + A K+L ++
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEV---------CACQVRATGKMYACKKLEKKRI 222
Query: 120 Q---GHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYF 176
+ G L E L +++ +V L D LV M G ++ H++ G
Sbjct: 223 KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG 282
Query: 177 QPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPT 236
P + ++ A GL LH +++YRD K NILLD + + ++SD GLA P
Sbjct: 283 FPEARAVFY--AAEICCGLEDLHRE--RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338
Query: 237 GDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHN 296
G + RV GT GY APE + T D ++ G +L E+++G+ + + +
Sbjct: 339 GQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE 395
Query: 297 LVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLR 346
VE R+ + + +FS PQA+ SL Q L +P R
Sbjct: 396 EVE----------RLVKEVPEEYSERFS-PQAR---SLCSQLLCKDPAER 431
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 97/220 (44%), Gaps = 21/220 (9%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE--- 124
R F +LG+G FG V + TG A+K L +E E
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAH 197
Query: 125 WLTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
LTE L HP L L Y + RL V E+ G + HL R + + +
Sbjct: 198 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 256
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+I + L +LHS E V+YRD K N++LD + + K++DFGL ++G D + +
Sbjct: 257 GAEIV----SALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMK 310
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
T GT Y APE L D + GVV+ E++ GR
Sbjct: 311 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
D LG G FG+V KG+ + + + I N + E L E N + QL
Sbjct: 16 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 70
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
+P +V+++G C E + +LV E G + +L + L ++++G +
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 125
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAA 254
+L E ++RD A N+LL + + AK+SDFGL++ D++ + G + + A
Sbjct: 126 YLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYA 182
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILS 281
PE + ++KSD++SFGV++ E S
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 97/220 (44%), Gaps = 21/220 (9%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE--- 124
R F +LG+G FG V + TG A+K L +E E
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAH 194
Query: 125 WLTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
LTE L HP L L Y + RL V E+ G + HL R + + +
Sbjct: 195 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 253
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+I + L +LHS E V+YRD K N++LD + + K++DFGL ++G D + +
Sbjct: 254 GAEIV----SALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMK 307
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
T GT Y APE L D + GVV+ E++ GR
Sbjct: 308 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 134/303 (44%), Gaps = 41/303 (13%)
Query: 65 SDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQ--GH 122
SD + N+R +G+G F V + H L TG +A+K +++
Sbjct: 5 SDEQPHIGNYRLLKTIGKGNFAKV---KLARHIL------TGREVAIKIIDKTQLNPTSL 55
Query: 123 KEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWS 182
++ E+ + L+HPN+VKL + L+ E+ G + ++L G + + S
Sbjct: 56 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 115
Query: 183 LRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHV 242
+I + + + H + ++++RD KA N+LLD++ N K++DFG + + G K
Sbjct: 116 KFRQIV----SAVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT 169
Query: 243 STRVMGTYGYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWA 301
G+ YAAPE + + + D++S GV+L ++SG + P NL E
Sbjct: 170 ---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELR 220
Query: 302 KPYLTSKRRI--------------FRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRP 347
+ L K RI F VL+P G + + + ++P + P
Sbjct: 221 ERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEP 280
Query: 348 DMD 350
++D
Sbjct: 281 ELD 283
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 129/290 (44%), Gaps = 34/290 (11%)
Query: 61 NFSYSDLRTATRN-FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF 119
+ + + + T+N FR VLG+GGFG V A TG + A K+L ++
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEV---------CACQVRATGKMYACKKLEKKRI 222
Query: 120 Q---GHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYF 176
+ G L E L +++ +V L D LV M G ++ H++ G
Sbjct: 223 KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG 282
Query: 177 QPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPT 236
P + ++ A GL LH +++YRD K NILLD + + ++SD GLA P
Sbjct: 283 FPEARAVFY--AAEICCGLEDLHRE--RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338
Query: 237 GDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHN 296
G + RV GT GY APE + T D ++ G +L E+++G+ + + +
Sbjct: 339 GQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE 395
Query: 297 LVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLR 346
VE R+ + + +FS PQA+ SL Q L +P R
Sbjct: 396 EVE----------RLVKEVPEEYSERFS-PQAR---SLCSQLLCKDPAER 431
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
LG G FG V G W ++ +A ++ +EG E++ E + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAI------------KMIKEGSMSEDEFIEEAKVMMNLSHE 79
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L G C + ++ E+M G + N+L FQ +++ + +L
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYL 136
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
S + ++RD A N L++ K+SDFGL+R D+ S ++ PE L
Sbjct: 137 ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVL 193
Query: 259 ATGHLTAKSDIYSFGVVLLEILS-GRRAIDK--NRPTGEH 295
++KSDI++FGV++ EI S G+ ++ N T EH
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH 233
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
LG G FG V G W ++ +A ++ +EG E++ E + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAI------------KMIKEGSMSEDEFIEEAKVMMNLSHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L G C + ++ E+M G + N+L FQ +++ + +L
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYL 121
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
S + ++RD A N L++ K+SDFGL+R D+ S ++ PE L
Sbjct: 122 ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVL 178
Query: 259 ATGHLTAKSDIYSFGVVLLEILS-GRRAIDK--NRPTGEH 295
++KSDI++FGV++ EI S G+ ++ N T EH
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH 218
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 37 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 89
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL +C +DD +L + G + ++ + GS+ + + +I
Sbjct: 90 VMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 147
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 148 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 117/243 (48%), Gaps = 28/243 (11%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
VLG+GG+G VF+ V + + A+T M + K + + E N L ++ HP
Sbjct: 24 VLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 139 NLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
+V L+ Y + +L L+ E++ G + L R G + + + +I++ A
Sbjct: 82 FIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM------AL 134
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
H + +IYRD K NI+L+ + KL+DFGL ++ + V+ GT Y APE
Sbjct: 135 GHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE--SIHDGTVTHXFCGTIEYMAPEI 192
Query: 258 LA-TGHLTAKSDIYSFGVVLLEILSG---------RRAIDKNRPTGEHNLVEWAKPYLTS 307
L +GH A D +S G ++ ++L+G ++ IDK + NL PYLT
Sbjct: 193 LMRSGHNRA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC-KLNL----PPYLTQ 246
Query: 308 KRR 310
+ R
Sbjct: 247 EAR 249
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 117/243 (48%), Gaps = 28/243 (11%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
VLG+GG+G VF+ V + + A+T M + K + + E N L ++ HP
Sbjct: 24 VLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 139 NLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
+V L+ Y + +L L+ E++ G + L R G + + + +I++ A
Sbjct: 82 FIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM------AL 134
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
H + +IYRD K NI+L+ + KL+DFGL ++ + V+ GT Y APE
Sbjct: 135 GHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE--SIHDGTVTHTFCGTIEYMAPEI 192
Query: 258 LA-TGHLTAKSDIYSFGVVLLEILSG---------RRAIDKNRPTGEHNLVEWAKPYLTS 307
L +GH A D +S G ++ ++L+G ++ IDK + NL PYLT
Sbjct: 193 LMRSGHNRA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC-KLNL----PPYLTQ 246
Query: 308 KRR 310
+ R
Sbjct: 247 EAR 249
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+ L + + +KE L E
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIMELREATSPKANKEILDEAY 103
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 160
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 161 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 214 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
LG G FG V G W ++ +A ++ +EG E++ E + L H
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAI------------KMIKEGSMSEDEFIEEAKVMMNLSHE 70
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
LV+L G C + ++ E+M G + N+L FQ +++ + +L
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYL 127
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
S + ++RD A N L++ K+SDFGL+R D+ S ++ PE L
Sbjct: 128 ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVL 184
Query: 259 ATGHLTAKSDIYSFGVVLLEILS-GRRAIDK--NRPTGEH 295
++KSDI++FGV++ EI S G+ ++ N T EH
Sbjct: 185 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH 224
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 27/252 (10%)
Query: 63 SYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQ-- 120
S +D + N+R +G+G F V + H L TG +AVK +++
Sbjct: 6 SATDEQPHIGNYRLQKTIGKGNFAKV---KLARHVL------TGREVAVKIIDKTQLNPT 56
Query: 121 GHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLS 180
++ E+ + L+HPN+VKL + LV E+ G + ++L G + +
Sbjct: 57 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 116
Query: 181 WSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKS 240
+ +I + + + H + +++RD KA N+LLD + N K++DFG + + G+K
Sbjct: 117 RAKFRQIV----SAVQYCH--QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL 170
Query: 241 HVSTRVMGTYGYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVE 299
G+ YAAPE + + + D++S GV+L ++SG + P NL E
Sbjct: 171 DT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 221
Query: 300 WAKPYLTSKRRI 311
+ L K RI
Sbjct: 222 LRERVLRGKYRI 233
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 41/305 (13%)
Query: 63 SYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQ-- 120
S +D + N+R +G+G F V + H L TG +A+K +++
Sbjct: 6 SCADEQPHIGNYRLLKTIGKGNFAKV---KLARHIL------TGREVAIKIIDKTQLNPT 56
Query: 121 GHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLS 180
++ E+ + L+HPN+VKL + L+ E+ G + ++L G + +
Sbjct: 57 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA 116
Query: 181 WSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKS 240
S +I + + + H + ++++RD KA N+LLD++ N K++DFG + + G K
Sbjct: 117 RSKFRQIV----SAVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170
Query: 241 HVSTRVMGTYGYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVE 299
G YAAPE + + + D++S GV+L ++SG + P NL E
Sbjct: 171 DA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 221
Query: 300 WAKPYLTSKRRI--------------FRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKL 345
+ L K RI F VL+P G + + + ++P +
Sbjct: 222 LRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFV 281
Query: 346 RPDMD 350
P++D
Sbjct: 282 EPELD 286
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL-TEINY 131
+FR VLG G F V LA + T L+A+K + +E +G + + EI
Sbjct: 21 DFR--DVLGTGAFSEVI--------LAEDKR-TQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGA 191
L ++ HPN+V L H L+ + + G + + + +G Y + + L ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL--- 126
Query: 192 ANGLAFLHSAEPKVIYRDFKASNIL---LDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
+ + +LH + +++RD K N+L LD + +SDFGL++ D V + G
Sbjct: 127 -DAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACG 180
Query: 249 TYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
T GY APE LA + D +S GV+ +L G
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L++ + MP G + +++ GS + L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 128
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFG A+ +K + +
Sbjct: 129 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VL G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 76
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L++ + MP G + +++ GS + L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 133
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 134 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL-TEINY 131
+FR VLG G F V LA + T L+A+K + +E +G + + EI
Sbjct: 21 DFR--DVLGTGAFSEVI--------LAEDKR-TQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGA 191
L ++ HPN+V L H L+ + + G + + + +G Y + + L ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL--- 126
Query: 192 ANGLAFLHSAEPKVIYRDFKASNIL---LDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
+ + +LH + +++RD K N+L LD + +SDFGL++ D V + G
Sbjct: 127 -DAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACG 180
Query: 249 TYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
T GY APE LA + D +S GV+ +L G
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VL G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 126
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 127 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 73
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L++ + MP G + +++ GS + L+W +++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 130
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFG A+ +K + +
Sbjct: 131 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL-TEINY 131
+FR VLG G F V LA + T L+A+K + +E +G + + EI
Sbjct: 21 DFR--DVLGTGAFSEVI--------LAEDKR-TQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGA 191
L ++ HPN+V L H L+ + + G + + + +G Y + + L ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL--- 126
Query: 192 ANGLAFLHSAEPKVIYRDFKASNIL---LDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
+ + +LH + +++RD K N+L LD + +SDFGL++ D V + G
Sbjct: 127 -DAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACG 180
Query: 249 TYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
T GY APE LA + D +S GV+ +L G
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VL G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 76
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 133
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFGLA+ +K + +
Sbjct: 134 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L++ + MP G + +++ GS + L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 128
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFG A+ +K + +
Sbjct: 129 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 128
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFG A+ +K + +
Sbjct: 129 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 25/219 (11%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT 127
+ + ++F+ LG G FG V H + S G A+K L +E K+ +
Sbjct: 2 KYSLQDFQILRTLGTGSFGRV-------HLIRSRH--NGRYYAMKVLKKEIVVRLKQ-VE 51
Query: 128 EIN----YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
N L + HP ++++ G + ++ +++ G + + L + + P++
Sbjct: 52 HTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY 111
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
++ L L +LHS + +IYRD K NILLD N + K++DFG A+ P V+
Sbjct: 112 AAEVCLA----LEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVT 160
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT Y APE ++T D +SFG+++ E+L+G
Sbjct: 161 YXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 38/277 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+GGF F E S A T+ I K L + Q K + EI+ L H +
Sbjct: 47 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQH 100
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V G+ ++D +V E R S+ RR + +P + +I LG +LH
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 156
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGP-TGDKSHVSTRVMGTYGYAAPEYL 258
+VI+RD K N+ L+ + K+ DFGLA G++ V + GT Y APE L
Sbjct: 157 RN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 211
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPR 318
+ + + D++S G ++ +L G +P E + ++ + YL K+
Sbjct: 212 SKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCLK--ETYLRIKK--------- 253
Query: 319 LEGQFSLPQAQK--AASLALQCLSVEPKLRPDMDEVV 353
++S+P+ AASL + L +P RP ++E++
Sbjct: 254 --NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 76
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 133
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFG A+ +K + +
Sbjct: 134 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 22/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEIN 130
F+ VLG G FG+V+KG W+ E + +A+K L + + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR----GSYFQPLSWSLRMK 186
+ + +P++ +L+G CL +L+ + MP G + +++ GS + L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 126
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A G+ +L + ++++RD A N+L+ + + K++DFG A+ +K + +
Sbjct: 127 -----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ A E + T +SD++S+GV + E+++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 38/277 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+GGF F E S A T+ I K L + Q K + EI+ L H +
Sbjct: 49 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQH 102
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V G+ ++D +V E R S+ RR + +P + +I LG +LH
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 158
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGP-TGDKSHVSTRVMGTYGYAAPEYL 258
+VI+RD K N+ L+ + K+ DFGLA G++ V + GT Y APE L
Sbjct: 159 RN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 213
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPR 318
+ + + D++S G ++ +L G +P E + ++ + YL K+
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCLK--ETYLRIKK--------- 255
Query: 319 LEGQFSLPQAQK--AASLALQCLSVEPKLRPDMDEVV 353
++S+P+ AASL + L +P RP ++E++
Sbjct: 256 --NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 95/222 (42%), Gaps = 21/222 (9%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE- 124
D R F +LG+G FG V + TG A+K L +E E
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEV 54
Query: 125 --WLTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSW 181
LTE L HP L L Y + RL V E+ G + HL R + + +
Sbjct: 55 AHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 113
Query: 182 SLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH 241
+I + L +LHS E V+YRD K N++LD + + K++DFGL ++G +
Sbjct: 114 FYGAEIV----SALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT- 167
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
GT Y APE L D + GVV+ E++ GR
Sbjct: 168 -MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 92/220 (41%), Gaps = 26/220 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTE----INYLGQL 135
LG G FG V V+ + + M +AVK L +E L ++YLG
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-- 107
Query: 136 HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWS------------- 182
+H N+V L+G C L++ E+ G + N L R+ F S
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 183 -LRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH 241
+ + A G+AFL A I+RD A NILL K+ DFGLAR
Sbjct: 168 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
V + APE + T +SD++S+G+ L E+ S
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 64 YSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK 123
+SDLR +G G FG+V+ + ++A+K+++ G Q ++
Sbjct: 17 FSDLRE----------IGHGSFGAVY---------FARDVRNSEVVAIKKMSYSGKQSNE 57
Query: 124 EW---LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLS 180
+W + E+ +L +L HPN ++ G L + LV E+ GS + L + +PL
Sbjct: 58 KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL---EVHKKPLQ 113
Query: 181 WSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKS 240
+ GA GLA+LHS +I+RD KA NILL KL DFG A +
Sbjct: 114 EVEIAAVTHGALQGLAYLHSH--NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX- 170
Query: 241 HVSTRVMGTYGYAAPEYLAT---GHLTAKSDIYSFGVVLLEI 279
+GT + APE + G K D++S G+ +E+
Sbjct: 171 -----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW-- 125
R NF VLG+G FG V V E TG L AVK L ++ +
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKE---------TGDLYAVKVLKKDVILQDDDVEC 69
Query: 126 -LTEINYLGQL-HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
+TE L +HP L +L D V EF+ G + H+ + + + +
Sbjct: 70 TMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFY 129
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+I + L FLH + +IYRD K N+LLD + KL+DFG+ ++G + +
Sbjct: 130 AAEII----SALMFLH--DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--T 181
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE L D ++ GV+L E+L G
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 25/215 (11%)
Query: 136 HHPNLVKLVGYCLEDDHRLL-VYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
+HP LV L C + + RL V E++ G + H+ R+ + + +I+L
Sbjct: 79 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA---- 133
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYA 253
L +LH E +IYRD K N+LLDS + KL+D+G+ ++G GD ++ GT Y
Sbjct: 134 LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYI 188
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFR 313
APE L D ++ GV++ E+++GR D G + P ++ +F+
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD---IVGSSD-----NPDQNTEDYLFQ 240
Query: 314 VLDPRLEGQFSLPQAQ--KAASLALQCLSVEPKLR 346
V+ LE Q +P++ KAAS+ L+ +PK R
Sbjct: 241 VI---LEKQIRIPRSMSVKAASVLKSFLNKDPKER 272
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 128/277 (46%), Gaps = 38/277 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+GGF F E S A T+ I K L + Q K + EI+ L H +
Sbjct: 23 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQH 76
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V G+ ++D +V E R S+ RR + +P + +I LG +LH
Sbjct: 77 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 132
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLA-RDGPTGDKSHVSTRVMGTYGYAAPEYL 258
+VI+RD K N+ L+ + K+ DFGLA + G++ V + GT Y APE L
Sbjct: 133 RN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 187
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPR 318
+ + + D++S G ++ +L G +P E + ++ + YL K+
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCLK--ETYLRIKK--------- 229
Query: 319 LEGQFSLPQAQK--AASLALQCLSVEPKLRPDMDEVV 353
++S+P+ AASL + L +P RP ++E++
Sbjct: 230 --NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 64 YSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK 123
+SDLR +G G FG+V+ + ++A+K+++ G Q ++
Sbjct: 56 FSDLRE----------IGHGSFGAVY---------FARDVRNSEVVAIKKMSYSGKQSNE 96
Query: 124 EW---LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLS 180
+W + E+ +L +L HPN ++ G L + LV E+ GS + L + +PL
Sbjct: 97 KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL---EVHKKPLQ 152
Query: 181 WSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKS 240
+ GA GLA+LHS +I+RD KA NILL KL DFG A +
Sbjct: 153 EVEIAAVTHGALQGLAYLHSH--NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX- 209
Query: 241 HVSTRVMGTYGYAAPEYLAT---GHLTAKSDIYSFGVVLLEI 279
+GT + APE + G K D++S G+ +E+
Sbjct: 210 -----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 28/225 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK-----RLNQEGFQGHKEWLTEINYLGQ 134
LG+G FG+V+ LA + ++A+K +L +EG + + EI
Sbjct: 22 LGKGKFGNVY--------LAREK-QNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSH 70
Query: 135 LHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
L HPN++++ Y + L+ EF PRG + L + G + + S + ++ A+
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL----ADA 126
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM-GTYGYA 253
L + H E KVI+RD K N+L+ K++DFG + P+ + R M GT Y
Sbjct: 127 LHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYL 179
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLV 298
PE + K D++ GV+ E L G D T H +
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 28/225 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK-----RLNQEGFQGHKEWLTEINYLGQ 134
LG+G FG+V+ LA + ++A+K +L +EG + + EI
Sbjct: 22 LGKGKFGNVY--------LAREK-QNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSH 70
Query: 135 LHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
L HPN++++ Y + L+ EF PRG + L + G + + S + ++ A+
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL----ADA 126
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM-GTYGYA 253
L + H E KVI+RD K N+L+ K++DFG + P+ + R M GT Y
Sbjct: 127 LHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYL 179
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLV 298
PE + K D++ GV+ E L G D T H +
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 28/225 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK-----RLNQEGFQGHKEWLTEINYLGQ 134
LG+G FG+V+ LA + ++A+K +L +EG + + EI
Sbjct: 23 LGKGKFGNVY--------LAREK-QNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSH 71
Query: 135 LHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
L HPN++++ Y + L+ EF PRG + L + G + + S + ++ A+
Sbjct: 72 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL----ADA 127
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM-GTYGYA 253
L + H E KVI+RD K N+L+ K++DFG + P+ + R M GT Y
Sbjct: 128 LHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYL 180
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLV 298
PE + K D++ GV+ E L G D T H +
Sbjct: 181 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 225
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 25/215 (11%)
Query: 136 HHPNLVKLVGYCLEDDHRLL-VYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
+HP LV L C + + RL V E++ G + H+ R+ + + +I+L
Sbjct: 111 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA---- 165
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYA 253
L +LH E +IYRD K N+LLDS + KL+D+G+ ++G GD ++ GT Y
Sbjct: 166 LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSTFCGTPNYI 220
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFR 313
APE L D ++ GV++ E+++GR D G + P ++ +F+
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI---VGSSD-----NPDQNTEDYLFQ 272
Query: 314 VLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLR 346
V+ LE Q +P+ + KAAS+ L+ +PK R
Sbjct: 273 VI---LEKQIRIPRSLSVKAASVLKSFLNKDPKER 304
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 94/220 (42%), Gaps = 21/220 (9%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE--- 124
R F +LG+G FG V + TG A+K L +E E
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAH 55
Query: 125 WLTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
LTE L HP L L Y + RL V E+ G + HL R + + +
Sbjct: 56 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 114
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+I + L +LHS E V+YRD K N++LD + + K++DFGL ++G +
Sbjct: 115 GAEIV----SALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--M 167
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
GT Y APE L D + GVV+ E++ GR
Sbjct: 168 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQ---GHKEWLTEIN 130
++ VLG+G FG V + TG AVK +++ + + L E+
Sbjct: 34 YKGQRVLGKGSFGEV---------ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 84
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L QL HPN++KL + + + LV E G + + + R + + + +I
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA----ARIIRQ 140
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVM 247
+G+ ++H + K+++RD K N+LL+S + N ++ DFGL+ K +
Sbjct: 141 VLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---I 195
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG------------RRAIDKNRPTGEH 295
GT Y APE L G K D++S GV+L +LSG + ++K + T E
Sbjct: 196 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE- 253
Query: 296 NLVEWAKPYLTSKRRIFRVL 315
L +W K ++K I ++L
Sbjct: 254 -LPQWKKVSESAKDLIRKML 272
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 123/287 (42%), Gaps = 38/287 (13%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGM-LIAVKRLNQEGFQGHKEWLTEINY 131
NFR + +G G F V++ A G + L V+ + + + + EI+
Sbjct: 33 NFRIEKKIGRGQFSEVYRA-------ACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL 85
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHL--FRRGSYFQPLSWSLRMKIAL 189
L QL+HPN++K +ED+ +V E G + + F++ P + + L
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+A L +HS +V++RD K +N+ + + KL D GL R K+ + ++GT
Sbjct: 146 CSA--LEHMHSR--RVMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHSLVGT 199
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKR 309
Y +PE + KSDI+S G +L E + P+ K
Sbjct: 200 PYYMSPERIHENGYNFKSDIWSLGCLLYE------------------MAALQSPFYGDKM 241
Query: 310 RIFRVLDPRLEGQFS-LPQ---AQKAASLALQCLSVEPKLRPDMDEV 352
++ + + + LP +++ L C++ +P+ RPD+ V
Sbjct: 242 NLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL-TEINY 131
+FR VLG G F V LA + T L+A+K + ++ +G + + EI
Sbjct: 21 DFR--DVLGTGAFSEVI--------LAEDKR-TQKLVAIKCIAKKALEGKEGSMENEIAV 69
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGA 191
L ++ HPN+V L H L+ + + G + + + +G Y + + L ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL--- 126
Query: 192 ANGLAFLHSAEPKVIYRDFKASNIL---LDSNYNAKLSDFGLARDGPTGDKSHVSTRVMG 248
+ + +LH + +++RD K N+L LD + +SDFGL++ D V + G
Sbjct: 127 -DAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACG 180
Query: 249 TYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
T GY APE LA + D +S GV+ +L G
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 25/215 (11%)
Query: 136 HHPNLVKLVGYCLEDDHRLL-VYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
+HP LV L C + + RL V E++ G + H+ R+ + + +I+L
Sbjct: 68 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA---- 122
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYA 253
L +LH E +IYRD K N+LLDS + KL+D+G+ ++G GD ++ GT Y
Sbjct: 123 LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYI 177
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFR 313
APE L D ++ GV++ E+++GR D G + P ++ +F+
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI---VGSSD-----NPDQNTEDYLFQ 229
Query: 314 VLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLR 346
V+ LE Q +P+ + KAAS+ L+ +PK R
Sbjct: 230 VI---LEKQIRIPRSLSVKAASVLKSFLNKDPKER 261
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPG-TGMLIAVKRLNQEGFQG--HKEWLTEINYLGQLH 136
LGE FG V+KG L PG +A+K L + +G +E+ E +L
Sbjct: 34 LGEDRFGKVYKG-----HLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQ 87
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRG---------------SYFQPLSW 181
HPN+V L+G +D +++ + G + L R S +P +
Sbjct: 88 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 147
Query: 182 SLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH 241
+ + A G+ +L S V+++D N+L+ N K+SD GL R+ D
Sbjct: 148 ---VHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK 202
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ + + APE + G + SDI+S+GVVL E+ S
Sbjct: 203 LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQ---GHKEWLTEIN 130
++ VLG+G FG V + TG AVK +++ + + L E+
Sbjct: 28 YKGQRVLGKGSFGEV---------ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L QL HPN++KL + + + LV E G + + + R + + + +I
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA----ARIIRQ 134
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVM 247
+G+ ++H + K+++RD K N+LL+S + N ++ DFGL+ K +
Sbjct: 135 VLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---I 189
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG------------RRAIDKNRPTGEH 295
GT Y APE L G K D++S GV+L +LSG + ++K + T E
Sbjct: 190 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE- 247
Query: 296 NLVEWAKPYLTSKRRIFRVL 315
L +W K ++K I ++L
Sbjct: 248 -LPQWKKVSESAKDLIRKML 266
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 94/220 (42%), Gaps = 21/220 (9%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE--- 124
R F +LG+G FG V + TG A+K L +E E
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAH 54
Query: 125 WLTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
LTE L HP L L Y + RL V E+ G + HL R + + +
Sbjct: 55 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 113
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+I + L +LHS E V+YRD K N++LD + + K++DFGL ++G +
Sbjct: 114 GAEIV----SALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--M 166
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
GT Y APE L D + GVV+ E++ GR
Sbjct: 167 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 26/239 (10%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF---QGH 122
++ +F ++G GGFG V+ + TG + A+K L+++ QG
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGE 233
Query: 123 KEWLTEINYLGQLHHPN--LVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPL 179
L E L + + + + Y +L + + M G + HL + G + +
Sbjct: 234 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD 293
Query: 180 SWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDK 239
+I LG H V+YRD K +NILLD + + ++SD GLA D + K
Sbjct: 294 MRFYAAEIILGLE------HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKK 346
Query: 240 SHVSTRVMGTYGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNL 297
H S +GT+GY APE L G + +D +S G +L ++L G +++ +H +
Sbjct: 347 PHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 26/239 (10%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF---QGH 122
++ +F ++G GGFG V+ + TG + A+K L+++ QG
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGE 233
Query: 123 KEWLTEINYLGQLHHPN--LVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPL 179
L E L + + + + Y +L + + M G + HL + G + +
Sbjct: 234 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD 293
Query: 180 SWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDK 239
+I LG H V+YRD K +NILLD + + ++SD GLA D + K
Sbjct: 294 MRFYAAEIILGLE------HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKK 346
Query: 240 SHVSTRVMGTYGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNL 297
H S +GT+GY APE L G + +D +S G +L ++L G +++ +H +
Sbjct: 347 PHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 26/239 (10%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF---QGH 122
++ +F ++G GGFG V+ + TG + A+K L+++ QG
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGE 233
Query: 123 KEWLTEINYLGQLHHPN--LVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPL 179
L E L + + + + Y +L + + M G + HL + G + +
Sbjct: 234 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD 293
Query: 180 SWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDK 239
+I LG L +H+ V+YRD K +NILLD + + ++SD GLA D + K
Sbjct: 294 MRFYAAEIILG----LEHMHNR--FVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKK 346
Query: 240 SHVSTRVMGTYGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNL 297
H S +GT+GY APE L G + +D +S G +L ++L G +++ +H +
Sbjct: 347 PHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQ---GHKEWLTEIN 130
++ VLG+G FG V + TG AVK +++ + + L E+
Sbjct: 52 YKGQRVLGKGSFGEV---------ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 102
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L QL HPN++KL + + + LV E G + + + R + + + +I
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA----ARIIRQ 158
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVM 247
+G+ ++H + K+++RD K N+LL+S + N ++ DFGL+ K +
Sbjct: 159 VLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---I 213
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG------------RRAIDKNRPTGEH 295
GT Y APE L G K D++S GV+L +LSG + ++K + T E
Sbjct: 214 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE- 271
Query: 296 NLVEWAKPYLTSKRRIFRVL 315
L +W K ++K I ++L
Sbjct: 272 -LPQWKKVSESAKDLIRKML 290
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQ---GHKEWLTEIN 130
++ VLG+G FG V + TG AVK +++ + + L E+
Sbjct: 51 YKGQRVLGKGSFGEV---------ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 101
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L QL HPN++KL + + + LV E G + + + R + + + +I
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA----ARIIRQ 157
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVM 247
+G+ ++H + K+++RD K N+LL+S + N ++ DFGL+ K +
Sbjct: 158 VLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---I 212
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG------------RRAIDKNRPTGEH 295
GT Y APE L G K D++S GV+L +LSG + ++K + T E
Sbjct: 213 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE- 270
Query: 296 NLVEWAKPYLTSKRRIFRVL 315
L +W K ++K I ++L
Sbjct: 271 -LPQWKKVSESAKDLIRKML 289
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 114/242 (47%), Gaps = 27/242 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH--KEWLTEIN 130
N+R +G+G F V + H L TG +AVK +++ ++ E+
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+ L+HPN+VKL + LV E+ G + ++L G + + + +I
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV-- 123
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
+ + + H + +++RD KA N+LLD++ N K++DFG + + G+K G+
Sbjct: 124 --SAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSP 176
Query: 251 GYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKR 309
YAAPE + + + D++S GV+L ++SG + P NL E + L K
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKY 230
Query: 310 RI 311
RI
Sbjct: 231 RI 232
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 94/221 (42%), Gaps = 21/221 (9%)
Query: 67 LRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW- 125
++ +F +LG+G FG VF LA + T A+K L ++ +
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVF--------LAEFK-KTNQFFAIKALKKDVVLMDDDVE 63
Query: 126 --LTEINYLG-QLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWS 182
+ E L HP L + ++ V E++ G + H+ S
Sbjct: 64 CTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLS 119
Query: 183 LRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHV 242
A GL FLHS ++YRD K NILLD + + K++DFG+ ++ GD
Sbjct: 120 RATFYAAEIILGLQFLHSK--GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-- 175
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
+ GT Y APE L D +SFGV+L E+L G+
Sbjct: 176 TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE---WLTEINYL-GQ 134
V+G+G FG V L + + AVK L ++ KE ++E N L
Sbjct: 45 VIGKGSFGKV---------LLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKN 95
Query: 135 LHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
+ HP LV L D V +++ G + HL R + +P + +IA +
Sbjct: 96 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIA----SA 151
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAA 254
L +LHS ++YRD K NILLDS + L+DFGL ++ + + ++ GT Y A
Sbjct: 152 LGYLHSL--NIVYRDLKPENILLDSQGHIVLTDFGLCKEN--IEHNSTTSTFCGTPEYLA 207
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILSG 282
PE L D + G VL E+L G
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 114/242 (47%), Gaps = 27/242 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH--KEWLTEIN 130
N+R +G+G F V + H L TG +AVK +++ ++ E+
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+ L+HPN+VKL + LV E+ G + ++L G + + + +I
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV-- 123
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
+ + + H + +++RD KA N+LLD++ N K++DFG + + G+K G+
Sbjct: 124 --SAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSP 176
Query: 251 GYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKR 309
YAAPE + + + D++S GV+L ++SG + P NL E + L K
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKY 230
Query: 310 RI 311
RI
Sbjct: 231 RI 232
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL-TEINYL 132
F LG G F V + + TG L AVK + ++ +G + + EI L
Sbjct: 24 FEFKETLGTGAFSEV---------VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 133 GQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAA 192
++ H N+V L +H LV + + G + + + +G Y + + +L ++
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVL---- 130
Query: 193 NGLAFLHSAEPKVIYRDFKASNILL---DSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ + +LH +++RD K N+L D +SDFGL++ GD V + GT
Sbjct: 131 DAVYYLHRM--GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGT 185
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GY APE LA + D +S GV+ +L G
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 25/215 (11%)
Query: 136 HHPNLVKLVGYCLEDDHRLL-VYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANG 194
+HP LV L C + + RL V E++ G + H+ R+ + + +I+L
Sbjct: 64 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA---- 118
Query: 195 LAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYA 253
L +LH E +IYRD K N+LLDS + KL+D+G+ ++G GD ++ GT Y
Sbjct: 119 LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYI 173
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFR 313
APE L D ++ GV++ E+++GR D G + P ++ +F+
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI---VGSSD-----NPDQNTEDYLFQ 225
Query: 314 VLDPRLEGQFSLPQ--AQKAASLALQCLSVEPKLR 346
V+ LE Q +P+ + KAAS+ L+ +PK R
Sbjct: 226 VI---LEKQIRIPRSLSVKAASVLKSFLNKDPKER 257
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 26/239 (10%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF---QGH 122
++ +F ++G GGFG V+ + TG + A+K L+++ QG
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGE 232
Query: 123 KEWLTEINYLGQLHHPN--LVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPL 179
L E L + + + + Y +L + + M G + HL + G + +
Sbjct: 233 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD 292
Query: 180 SWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDK 239
+I LG L +H+ V+YRD K +NILLD + + ++SD GLA D + K
Sbjct: 293 MRFYAAEIILG----LEHMHNR--FVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKK 345
Query: 240 SHVSTRVMGTYGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNL 297
H S +GT+GY APE L G + +D +S G +L ++L G +++ +H +
Sbjct: 346 PHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 32/241 (13%)
Query: 56 SSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLN 115
+ ++ S LR F ++G G +G V+KG TG L A+K ++
Sbjct: 8 ARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG---------RHVKTGQLAAIKVMD 58
Query: 116 QEGFQGHKEWLTEINYLGQL-HHPNLVKLVGYCLE------DDHRLLVYEFMPRGSMENH 168
G + +E EIN L + HH N+ G ++ DD LV EF GS+ +
Sbjct: 59 VTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL 117
Query: 169 LFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDF 228
+ + + L I GL+ LH + KVI+RD K N+LL N KL DF
Sbjct: 118 I--KNTKGNTLKEEWIAYICREILRGLSHLH--QHKVIHRDIKGQNVLLTENAEVKLVDF 173
Query: 229 GLAR--DGPTGDKSHVSTRVMGTYGYAAPEYLATGH-----LTAKSDIYSFGVVLLEILS 281
G++ D G ++ +GT + APE +A KSD++S G+ +E+
Sbjct: 174 GVSAQLDRTVGRRN----TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE 229
Query: 282 G 282
G
Sbjct: 230 G 230
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPG-TGMLIAVKRLNQEGFQG--HKEWLTEINYLGQLH 136
LGE FG V+KG L PG +A+K L + +G +E+ E +L
Sbjct: 17 LGEDRFGKVYKG-----HLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQ 70
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRG---------------SYFQPLSW 181
HPN+V L+G +D +++ + G + L R S +P +
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 182 SLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH 241
+ + A G+ +L S V+++D N+L+ N K+SD GL R+ D
Sbjct: 131 ---VHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK 185
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ + + APE + G + SDI+S+GVVL E+ S
Sbjct: 186 LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 126/277 (45%), Gaps = 38/277 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+GGF F E S A T+ I K L + Q K + EI+ L H +
Sbjct: 29 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQH 82
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V G+ ++D +V E R S+ RR + +P + +I LG +LH
Sbjct: 83 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 138
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGP-TGDKSHVSTRVMGTYGYAAPEYL 258
+VI+RD K N+ L+ + K+ DFGLA G++ + GT Y APE L
Sbjct: 139 RN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVL 193
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPR 318
+ + + D++S G ++ +L G +P E + ++ + YL K+
Sbjct: 194 SKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCLK--ETYLRIKK--------- 235
Query: 319 LEGQFSLPQAQK--AASLALQCLSVEPKLRPDMDEVV 353
++S+P+ AASL + L +P RP ++E++
Sbjct: 236 --NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG-HKEWLTEINY 131
+F S LG G G V K RP +G+++A K ++ E + + E+
Sbjct: 17 DFERISELGAGNGGVVTK--------VQHRP-SGLIMARKLIHLEIKPAIRNQIIRELQV 67
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGA 191
L + + P +V G D + E M GS++ L + + + K+++
Sbjct: 68 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KEAKRIPEEILGKVSIAV 123
Query: 192 ANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYG 251
GLA+L ++++RD K SNIL++S KL DFG++ G D ++ +GT
Sbjct: 124 LRGLAYLREKH-QIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 178
Query: 252 YAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAI 286
Y APE L H + +SDI+S G+ L+E+ GR I
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH--K 123
D+ + F +LG+G FGSV + + + G+ + +AVK L + +
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQED------GSFVKVAVKMLKADIIASSDIE 70
Query: 124 EWLTEINYLGQLHHPNLVKLVGYCLEDDHR------LLVYEFMPRGSMENHLFRRGSYFQ 177
E+L E + + HP++ KLVG L + +++ FM G + L
Sbjct: 71 EFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGEN 130
Query: 178 PLSWSLR--MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGP 235
P + L+ ++ + A G+ +L S I+RD A N +L + ++DFGL+R
Sbjct: 131 PFNLPLQTLVRFMVDIACGMEYLSSR--NFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
Query: 236 TGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+GD + A E LA T SD+++FGV + EI++
Sbjct: 189 SGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 27/211 (12%)
Query: 80 LGEGGFGSVFKG-WVDEHSLA--STRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
LG G FG V+ G W +A + +PGT ++ E F L E + +L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGT--------MSPESF------LEEAQIMKKLK 62
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H LV+L + ++ +V E+M +GS+ + F + + L + +A A G+A
Sbjct: 63 HDKLVQLYA-VVSEEPIYIVTEYMNKGSLLD--FLKDGEGRALKLPNLVDMAAQVAAGMA 119
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYAA 254
++ I+RD +++NIL+ + K++DFGLAR + + + R + + A
Sbjct: 120 YIERM--NYIHRDLRSANILVGNGLICKIADFGLAR---LIEDNEXTARQGAKFPIKWTA 174
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILSGRRA 285
PE G T KSD++SFG++L E+++ R
Sbjct: 175 PEAALYGRFTIKSDVWSFGILLTELVTKGRV 205
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 31/241 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+GEG G V +T TG +AVK+++ Q + E+ + HH N
Sbjct: 53 IGEGSTGIV---------CIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V + L D +V EF+ G++ + + + ++ + L L++LH
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLH 158
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ VI+RD K+ +ILL S+ KLSDFG + ++GT + APE ++
Sbjct: 159 NQ--GVIHRDIKSDSILLTSDGRIKLSDFGFC--AQVSKEVPKRKXLVGTPYWMAPEVIS 214
Query: 260 TGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPRL 319
+ DI+S G++++E++ G + +P L + RRI L PR+
Sbjct: 215 RLPYGTEVDIWSLGIMVIEMIDGEPPY-------------FNEPPLQAMRRIRDSLPPRV 261
Query: 320 E 320
+
Sbjct: 262 K 262
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 98/220 (44%), Gaps = 22/220 (10%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW-- 125
+ +F +LG+G FG V + TG A+K L +E E
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 54
Query: 126 -LTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
+TE L HP L L Y + RL V E+ G + HL R + + +
Sbjct: 55 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 113
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+I + L +LHS + V+YRD K N++LD + + K++DFGL ++G D + +
Sbjct: 114 GAEIV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMK 166
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
T GT Y APE L D + GVV+ E++ GR
Sbjct: 167 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 98/220 (44%), Gaps = 22/220 (10%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW-- 125
+ +F +LG+G FG V + TG A+K L +E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 126 -LTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
+TE L HP L L Y + RL V E+ G + HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+I + L +LHS + V+YRD K N++LD + + K++DFGL ++G D + +
Sbjct: 111 GAEIV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMK 163
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
T GT Y APE L D + GVV+ E++ GR
Sbjct: 164 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 126/277 (45%), Gaps = 38/277 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+GGF F E S A T+ I K L + Q K + EI+ L H +
Sbjct: 25 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQH 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V G+ ++D +V E R S+ RR + +P + +I LG +LH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 134
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGP-TGDKSHVSTRVMGTYGYAAPEYL 258
+VI+RD K N+ L+ + K+ DFGLA G++ + GT Y APE L
Sbjct: 135 RN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVL 189
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPR 318
+ + + D++S G ++ +L G +P E + ++ + YL K+
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCLK--ETYLRIKK--------- 231
Query: 319 LEGQFSLPQAQK--AASLALQCLSVEPKLRPDMDEVV 353
++S+P+ AASL + L +P RP ++E++
Sbjct: 232 --NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 98/220 (44%), Gaps = 22/220 (10%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW-- 125
+ +F +LG+G FG V + TG A+K L +E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 126 -LTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
+TE L HP L L Y + RL V E+ G + HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+I + L +LHS + V+YRD K N++LD + + K++DFGL ++G D + +
Sbjct: 111 GAEIV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMK 163
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
T GT Y APE L D + GVV+ E++ GR
Sbjct: 164 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 27/242 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH--KEWLTEIN 130
N+R +G+G F V + H L TG +AVK +++ ++ E+
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+ L+HPN+VKL + LV E+ G + ++L G + + + +I
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV-- 123
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
+ + + H + +++RD KA N+LLD++ N K++DFG + + G+K G
Sbjct: 124 --SAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAP 176
Query: 251 GYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKR 309
YAAPE + + + D++S GV+L ++SG + P NL E + L K
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKY 230
Query: 310 RI 311
RI
Sbjct: 231 RI 232
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 18/204 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+G+G G+V+ + TG +A++++N + + + EI + + +PN
Sbjct: 28 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V + L D +V E++ GS+ + + ++ R L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH 133
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
S + VI+RD K+ NILL + + KL+DFG T ++S ST V GT + APE +
Sbjct: 134 SNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSTMV-GTPYWMAPEVVT 189
Query: 260 TGHLTAKSDIYSFGVVLLEILSGR 283
K DI+S G++ +E++ G
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 126/277 (45%), Gaps = 38/277 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+GGF F E S A T+ I K L + Q K + EI+ L H +
Sbjct: 25 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQH 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V G+ ++D +V E R S+ RR + +P + +I LG +LH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 134
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGP-TGDKSHVSTRVMGTYGYAAPEYL 258
+VI+RD K N+ L+ + K+ DFGLA G++ + GT Y APE L
Sbjct: 135 RN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVL 189
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPR 318
+ + + D++S G ++ +L G +P E + ++ + YL K+
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCLK--ETYLRIKK--------- 231
Query: 319 LEGQFSLPQAQK--AASLALQCLSVEPKLRPDMDEVV 353
++S+P+ AASL + L +P RP ++E++
Sbjct: 232 --NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 126/292 (43%), Gaps = 40/292 (13%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW 125
D + + +G GGF V + TG ++A+K +++
Sbjct: 4 DYDELLKYYELHETIGTGGFAKV---------KLACHILTGEMVAIKIMDKNTLGSDLPR 54
Query: 126 L-TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR 184
+ TEI L L H ++ +L + +V E+ P G + +++ + + + +
Sbjct: 55 IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVF 114
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVST 244
+I + +A++HS +RD K N+L D + KL DFGL P G+K +
Sbjct: 115 RQIV----SAVAYVHSQ--GYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQ 167
Query: 245 RVMGTYGYAAPEYL-ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKP 303
G+ YAAPE + +L +++D++S G++L ++ G D + +
Sbjct: 168 TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALY-------- 219
Query: 304 YLTSKRRIFRVLDPRLEGQFSLPQAQKAASLAL--QCLSVEPKLRPDMDEVV 353
++I R G++ +P+ +S+ L Q L V+PK R M ++
Sbjct: 220 -----KKIMR-------GKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEWLTEINYLGQLHH 137
+GEG FG V +G + + M +A+K N +++L E + Q H
Sbjct: 17 CIGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P++VKL+G + ++ ++ E G + + L R S L A + LA+
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLIL---YAYQLSTALAY 126
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L S + ++RD A N+L+ SN KL DFGL+R S + + APE
Sbjct: 127 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI-KWMAPES 183
Query: 258 LATGHLTAKSDIYSFGVVLLEIL 280
+ T+ SD++ FGV + EIL
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 27/242 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH--KEWLTEIN 130
N+R +G+G F V + H L TG +AV+ +++ ++ E+
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVRIIDKTQLNSSSLQKLFREVR 65
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+ L+HPN+VKL + LV E+ G + ++L G + + + +I
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV-- 123
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
+ + + H + +++RD KA N+LLD++ N K++DFG + + G+K G+
Sbjct: 124 --SAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSP 176
Query: 251 GYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKR 309
YAAPE + + + D++S GV+L ++SG + P NL E + L K
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKY 230
Query: 310 RI 311
RI
Sbjct: 231 RI 232
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 27/242 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH--KEWLTEIN 130
N+R +G+G F V + H L TG +AV+ +++ ++ E+
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVRIIDKTQLNSSSLQKLFREVR 65
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+ L+HPN+VKL + LV E+ G + ++L G + + + +I
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV-- 123
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
+ + + H + +++RD KA N+LLD++ N K++DFG + + G+K G+
Sbjct: 124 --SAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSP 176
Query: 251 GYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKR 309
YAAPE + + + D++S GV+L ++SG + P NL E + L K
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKY 230
Query: 310 RI 311
RI
Sbjct: 231 RI 232
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINY 131
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 10 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 62
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 63 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 119
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 120 --SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 175
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINY 131
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 11 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 63
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 64 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 120
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 121 --SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 176
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINY 131
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 9 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 61
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 62 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 118
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 119 --SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 174
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 84
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 85 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIV- 142
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 143 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L + SD+++ G ++ ++++G
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINY 131
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 8 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 60
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 61 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 117
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 118 --SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 173
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 174 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 27/242 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH--KEWLTEIN 130
N+R +G+G F V + H L TG +AVK +++ ++ E+
Sbjct: 8 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQKLFREVR 58
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+ L+HPN+VKL + LV E+ G + ++L G + + + + +
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-WMKEKEARAKFRQIVS 117
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
A + + +++RD KA N+LLD++ N K++DFG + + G+K G+
Sbjct: 118 AVQ-----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSP 169
Query: 251 GYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKR 309
YAAPE + + + D++S GV+L ++SG + P NL E + L K
Sbjct: 170 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKY 223
Query: 310 RI 311
RI
Sbjct: 224 RI 225
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 35/228 (15%)
Query: 67 LRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW- 125
++ +F +LG+G FG VF LA + T A+K L ++ +
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVF--------LAEFK-KTNQFFAIKALKKDVVLMDDDVE 62
Query: 126 --LTEINYLG-QLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHL-------FRRGSY 175
+ E L HP L + ++ V E++ G + H+ R ++
Sbjct: 63 CTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF 122
Query: 176 FQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGP 235
+ A GL FLHS ++YRD K NILLD + + K++DFG+ ++
Sbjct: 123 Y-----------AAEIILGLQFLHSK--GIVYRDLKLDNILLDKDGHIKIADFGMCKENM 169
Query: 236 TGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
GD + GT Y APE L D +SFGV+L E+L G+
Sbjct: 170 LGDAK--TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
D LG G FGSV +G + +A+K L Q + +E + E + QL
Sbjct: 15 DIELGCGNFGSVRQG-------VYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL 67
Query: 136 HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
+P +V+L+G C + + +LV E G + H F G + + S ++ + G+
Sbjct: 68 DNPYIVRLIGVC-QAEALMLVMEMAGGGPL--HKFLVGKR-EEIPVSNVAELLHQVSMGM 123
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYA 253
+L E ++RD A N+LL + + AK+SDFGL++ D S+ + R G + +
Sbjct: 124 KYLE--EKNFVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWY 180
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILS 281
APE + +++SD++S+GV + E LS
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 23/221 (10%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLN----QEGFQG 121
D+++ + + LGEG F +V+K + T ++A+K++ E G
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYK---------ARDKNTNQIVAIKKIKLGHRSEAKDG 54
Query: 122 -HKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLS 180
++ L EI L +L HPN++ L+ + LV++FM +E + P
Sbjct: 55 INRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSH 113
Query: 181 WSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKS 240
M + L GL +LH + +++RD K +N+LLD N KL+DFGLA+ + +++
Sbjct: 114 IKAYMLMTL---QGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 168
Query: 241 HVSTRVMGTYGYAAPEYLATGHLTAKS-DIYSFGVVLLEIL 280
+ V T Y APE L + D+++ G +L E+L
Sbjct: 169 YXHQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQ---GHKEWLTEIN 130
++ VLG+G FG V + TG AVK +++ + + L E+
Sbjct: 28 YKGQRVLGKGSFGEV---------ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L QL HPN+ KL + + + LV E G + + + R + + + +I
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA----ARIIRQ 134
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVM 247
+G+ + H + K+++RD K N+LL+S + N ++ DFGL+ K +
Sbjct: 135 VLSGITYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK---I 189
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE L G K D++S GV+L +LSG
Sbjct: 190 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW 125
D + +F +LG+G FG V + TG A+K L +E E
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEV 54
Query: 126 ---LTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSW 181
+TE L HP L L Y + RL V E+ G + HL R + + +
Sbjct: 55 AHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 113
Query: 182 SLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH 241
+I + L +LHS + V+YRD K N++LD + + K++DFGL ++G + +
Sbjct: 114 FYGAEIV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT- 166
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
GT Y APE L D + GVV+ E++ GR
Sbjct: 167 -MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 41/292 (14%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW 125
D RT R R LG+GGF + E + T+ + K + + Q K
Sbjct: 37 DPRTMKRYMR-GRFLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEK-M 89
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLS-WSLR 184
TEI L +P++V G+ +DD +V E R S+ RR + +P + + +R
Sbjct: 90 STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLA-RDGPTGDKSHVS 243
I G+ +LH+ +VI+RD K N+ L+ + + K+ DFGLA + G++
Sbjct: 150 QTI-----QGVQYLHNN--RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT- 201
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKP 303
+ GT Y APE L + + DI+S G +L +L G +P E + ++ +
Sbjct: 202 --LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCLK--ET 250
Query: 304 YLTSKRRIFRVLDPRLEGQFSLPQAQK--AASLALQCLSVEPKLRPDMDEVV 353
Y+ K+ ++S+P+ A++L + L +P LRP + E++
Sbjct: 251 YIRIKK-----------NEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + +L R +A+K+++ Q + + L EI L +
Sbjct: 33 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-CQHLSNDHICYFLYQILRGLK 142
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 143 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 30 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 82
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 83 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 140
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 141 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 33/232 (14%)
Query: 54 LQSSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKR 113
+Q++NI+ + F VLG G F VF L R TG L A+K
Sbjct: 2 MQTTNIR-----------KTFIFMEVLGSGAFSEVF--------LVKQRL-TGKLFALKC 41
Query: 114 LNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRG 173
+ + EI L ++ H N+V L H LV + + G + + + RG
Sbjct: 42 IKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG 101
Query: 174 SYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILL---DSNYNAKLSDFGL 230
Y + + SL ++ L A + +LH E +++RD K N+L + N ++DFGL
Sbjct: 102 VYTEKDA-SLVIQQVLSA---VKYLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGL 155
Query: 231 ARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
++ G + + GT GY APE LA + D +S GV+ +L G
Sbjct: 156 SKMEQNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 33 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 85
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 86 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 143
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 144 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 30 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 82
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 83 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 140
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 141 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 84
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 85 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 142
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 143 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 33 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 85
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 86 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 143
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 144 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + +L R +A+K+++ Q + + L EI L +
Sbjct: 33 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 142
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 143 YIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 28/226 (12%)
Query: 71 TRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWLT 127
+ +F+ S+LGEG +G V ++T TG ++A+K++ E F L
Sbjct: 10 SSDFQLKSLLGEGAYGVV---------CSATHKPTGEIVAIKKI--EPFDKPLFALRTLR 58
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI L H N++ + D ++ + M+ L R S Q LS
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYF 117
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---------DGPTGD 238
+ LH + VI+RD K SN+L++SN + K+ DFGLAR PTG
Sbjct: 118 IYQTLRAVKVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 239 KSHVSTRVMGTYGYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGR 283
+S + T + T Y APE + T +++ D++S G +L E+ R
Sbjct: 176 QSGM-TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 47/295 (15%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW 125
D RT R R LG+GGF + E + T+ + K + + Q K
Sbjct: 37 DPRTMKRYMR-GRFLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEK-M 89
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLS-WSLR 184
TEI L +P++V G+ +DD +V E R S+ RR + +P + + +R
Sbjct: 90 STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR----DGPTGDKS 240
I G+ +LH+ +VI+RD K N+ L+ + + K+ DFGLA DG
Sbjct: 150 QTI-----QGVQYLHNN--RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG------ 196
Query: 241 HVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEW 300
+ GT Y APE L + + DI+S G +L +L G +P E + ++
Sbjct: 197 ERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCLK- 248
Query: 301 AKPYLTSKRRIFRVLDPRLEGQFSLPQAQK--AASLALQCLSVEPKLRPDMDEVV 353
+ Y+ K+ ++S+P+ A++L + L +P LRP + E++
Sbjct: 249 -ETYIRIKK-----------NEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 84
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 85 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 142
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 143 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEWLTEINYLGQLHH 137
+GEG FG V +G + + M +A+K N +++L E + Q H
Sbjct: 17 CIGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P++VKL+G + ++ ++ E G + + L R S L A + LA+
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAY 126
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L S + ++RD A N+L+ SN KL DFGL+R S + + APE
Sbjct: 127 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 183
Query: 258 LATGHLTAKSDIYSFGVVLLEIL 280
+ T+ SD++ FGV + EIL
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE-WLTEINYLGQLH 136
S +GEG +G V + +L R +A+K+++ Q + + L EI L +
Sbjct: 33 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 142
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 143 YIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 84
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 85 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 142
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 143 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINY 131
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 15 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 67
Query: 132 LGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 68 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 124
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 125 --SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 180
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 181 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + +L R +A+K+++ Q + + L EI L +
Sbjct: 34 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 143
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 144 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + +L R +A+K+++ Q + + L EI L +
Sbjct: 35 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 85
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 144
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 145 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + +L R +A+K+++ Q + + L EI L +
Sbjct: 26 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 76
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 135
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 136 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + +L R +A+K+++ Q + + L EI L +
Sbjct: 33 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 142
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 143 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 47/295 (15%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW 125
D RT R R LG+GGF + E + T+ + K + + Q K
Sbjct: 37 DPRTMKRYMR-GRFLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEK-M 89
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLS-WSLR 184
TEI L +P++V G+ +DD +V E R S+ RR + +P + + +R
Sbjct: 90 STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR----DGPTGDKS 240
I G+ +LH+ +VI+RD K N+ L+ + + K+ DFGLA DG
Sbjct: 150 QTI-----QGVQYLHNN--RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG------ 196
Query: 241 HVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEW 300
+ GT Y APE L + + DI+S G +L +L G +P E + ++
Sbjct: 197 ERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCLK- 248
Query: 301 AKPYLTSKRRIFRVLDPRLEGQFSLPQAQK--AASLALQCLSVEPKLRPDMDEVV 353
+ Y+ K+ ++S+P+ A++L + L +P LRP + E++
Sbjct: 249 -ETYIRIKK-----------NEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 30 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 82
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 83 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 140
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 141 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 27/242 (11%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH--KEWLTEIN 130
N+R +G+G F V + H L TG +AVK +++ ++ E+
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L+HPN+VKL + LV E+ G + ++L G + + + +I
Sbjct: 66 IXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIV-- 123
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
+ + + H + +++RD KA N+LLD++ N K++DFG + + G+K G
Sbjct: 124 --SAVQYCH--QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAP 176
Query: 251 GYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKR 309
YAAPE + + + D++S GV+L ++SG + P NL E + L K
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKY 230
Query: 310 RI 311
RI
Sbjct: 231 RI 232
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 84
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 85 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 142
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 143 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW-- 125
+ +F +LG+G FG V + TG A+K L +E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 126 -LTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
+TE L HP L L Y + RL V E+ G + HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+I + L +LHS + V+YRD K N++LD + + K++DFGL ++G + +
Sbjct: 111 GAEIV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--M 162
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
GT Y APE L D + GVV+ E++ GR
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 28/226 (12%)
Query: 71 TRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWLT 127
+ +F+ S+LGEG +G V ++T TG ++A+K++ E F L
Sbjct: 10 SSDFQLKSLLGEGAYGVV---------CSATHKPTGEIVAIKKI--EPFDKPLFALRTLR 58
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI L H N++ + D ++ + M+ L R S Q LS
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYF 117
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---------DGPTGD 238
+ LH + VI+RD K SN+L++SN + K+ DFGLAR PTG
Sbjct: 118 IYQTLRAVKVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 239 KSHVSTRVMGTYGYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGR 283
+S + T + T Y APE + T +++ D++S G +L E+ R
Sbjct: 176 QSGM-TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + +L R +A+K+++ Q + + L EI L +
Sbjct: 27 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 136
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 137 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + +L R +A+K+++ Q + + L EI L +
Sbjct: 27 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 136
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 137 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 100/219 (45%), Gaps = 38/219 (17%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE------GFQGHKEWLTEINYL 132
VLG GGFG VF A TG L A K+LN++ G+QG + E L
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKIL 239
Query: 133 GQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGS----YFQPLSWSLRMKI 187
++H +V L Y E L LV M G + H++ + +P + +I
Sbjct: 240 AKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLA---RDGPTGDKSHVST 244
+GL LH + +IYRD K N+LLD + N ++SD GLA + G T K +
Sbjct: 299 V----SGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-- 350
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
GT G+ APE L D ++ GV L E+++ R
Sbjct: 351 ---GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 35 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 87
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 88 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 145
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 146 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 47/295 (15%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW 125
D RT R R LG+GGF + E + T+ + K + + Q K
Sbjct: 21 DPRTMKRYMR-GRFLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEK-M 73
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLS-WSLR 184
TEI L +P++V G+ +DD +V E R S+ RR + +P + + +R
Sbjct: 74 STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 133
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR----DGPTGDKS 240
I G+ +LH+ +VI+RD K N+ L+ + + K+ DFGLA DG
Sbjct: 134 QTI-----QGVQYLHNN--RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG------ 180
Query: 241 HVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEW 300
+ GT Y APE L + + DI+S G +L +L G +P E + ++
Sbjct: 181 ERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCLK- 232
Query: 301 AKPYLTSKRRIFRVLDPRLEGQFSLPQAQK--AASLALQCLSVEPKLRPDMDEVV 353
+ Y+ K+ ++S+P+ A++L + L +P LRP + E++
Sbjct: 233 -ETYIRIKK-----------NEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 275
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 31/222 (13%)
Query: 71 TRNFRPDSV-----LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVK-----RLNQEGFQ 120
TR+F D LG+G FG+V+ LA + + ++A+K ++ +EG +
Sbjct: 17 TRHFTIDDFEIGRPLGKGKFGNVY--------LAREK-KSHFIVALKVLFKSQIEKEGVE 67
Query: 121 GHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLS 180
+ EI LHHPN+++L Y + L+ E+ PRG + L + ++ + +
Sbjct: 68 --HQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRT 125
Query: 181 WSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKS 240
++ ++ A+ L + H KVI+RD K N+LL K++DFG + P+ +
Sbjct: 126 ATIMEEL----ADALMYCHGK--KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK 179
Query: 241 HVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT Y PE + K D++ GV+ E+L G
Sbjct: 180 TMC----GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW-- 125
+ +F +LG+G FG V + TG A+K L +E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 126 -LTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
+TE L HP L L Y + RL V E+ G + HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+I + L +LHS + V+YRD K N++LD + + K++DFGL ++G + +
Sbjct: 111 GAEIV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--M 162
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
GT Y APE L D + GVV+ E++ GR
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 106/225 (47%), Gaps = 26/225 (11%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPG--TGMLIAVKRLNQEGF----QG 121
+ NF VLG G +G VF L G TG L A+K L + +
Sbjct: 50 KVGIENFELLKVLGTGAYGKVF--------LVRKISGHDTGKLYAMKVLKKATIVQKAKT 101
Query: 122 HKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLS 180
+ TE L + + + Y + + +L L+ +++ G + HL +R + +
Sbjct: 102 TEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH-- 159
Query: 181 WSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKS 240
++I +G LA H + +IYRD K NILLDSN + L+DFGL+++ D++
Sbjct: 160 ---EVQIYVGEIV-LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-VADET 214
Query: 241 HVSTRVMGTYGYAAPEYL---ATGHLTAKSDIYSFGVVLLEILSG 282
+ GT Y AP+ + +GH A D +S GV++ E+L+G
Sbjct: 215 ERAYDFCGTIEYMAPDIVRGGDSGHDKA-VDWWSLGVLMYELLTG 258
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+GEG G V +A+ R +G L+AVK+++ Q + E+ + H N
Sbjct: 159 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V++ L D +V EF+ G++ + + + ++ + L L+ LH
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 264
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV------MGTYGYA 253
+ VI+RD K+ +ILL + KLSDFG + VS V +GT +
Sbjct: 265 AQ--GVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEVPRRKXLVGTPYWM 314
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE ++ + DI+S G++++E++ G
Sbjct: 315 APELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW-- 125
+ +F +LG+G FG V + TG A+K L +E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 126 -LTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
+TE L HP L L Y + RL V E+ G + HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+I + L +LHS + V+YRD K N++LD + + K++DFGL ++G + +
Sbjct: 111 GAEIV----SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--M 162
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
GT Y APE L D + GVV+ E++ GR
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+GEG FG + ST G +I +++ + +E E+ L + HPN
Sbjct: 32 IGEGSFGKAI-------LVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHL-FRRGSYFQP---LSWSLRMKIALGAANGL 195
+V+ E+ +V ++ G + + ++G FQ L W +++ +AL
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK----- 139
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAP 255
H + K+++RD K+ NI L + +L DFG+AR ++ +GT Y +P
Sbjct: 140 ---HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNSTVELARACIGTPYYLSP 194
Query: 256 EYLATGHLTAKSDIYSFGVVLLEILSGRRAID 287
E KSDI++ G VL E+ + + A +
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 84
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 85 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 142
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 143 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 25/213 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWLTEINYLGQLH 136
LGEG FG V LA T T +A+K ++++ + H EI+YL L
Sbjct: 17 LGEGSFGKV--------KLA-THYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
HP+++KL ++V E+ G + +++ + + +I +
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA----IE 122
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+ H K+++RD K N+LLD N N K++DFGL+ G+ S G+ YAAPE
Sbjct: 123 YCHRH--KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 177
Query: 257 YLATGHLTA--KSDIYSFGVVLLEILSGRRAID 287
+ G L A + D++S G+VL +L GR D
Sbjct: 178 VI-NGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 29 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 81
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 82 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 139
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 140 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+G+G G+V+ + TG +A++++N + + + EI + + +PN
Sbjct: 28 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V + L D +V E++ GS+ + + ++ R L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH 133
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGL-ARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
S + VI+RD K+ NILL + + KL+DFG A+ P K + ++GT + APE +
Sbjct: 134 SNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVV 188
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGR 283
K DI+S G++ +E++ G
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 100/219 (45%), Gaps = 38/219 (17%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE------GFQGHKEWLTEINYL 132
VLG GGFG VF A TG L A K+LN++ G+QG + E L
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKIL 239
Query: 133 GQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGS----YFQPLSWSLRMKI 187
++H +V L Y E L LV M G + H++ + +P + +I
Sbjct: 240 AKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLA---RDGPTGDKSHVST 244
+GL LH + +IYRD K N+LLD + N ++SD GLA + G T K +
Sbjct: 299 V----SGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-- 350
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
GT G+ APE L D ++ GV L E+++ R
Sbjct: 351 ---GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 100/219 (45%), Gaps = 38/219 (17%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE------GFQGHKEWLTEINYL 132
VLG GGFG VF A TG L A K+LN++ G+QG + E L
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKIL 239
Query: 133 GQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGS----YFQPLSWSLRMKI 187
++H +V L Y E L LV M G + H++ + +P + +I
Sbjct: 240 AKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLA---RDGPTGDKSHVST 244
+GL LH + +IYRD K N+LLD + N ++SD GLA + G T K +
Sbjct: 299 V----SGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-- 350
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
GT G+ APE L D ++ GV L E+++ R
Sbjct: 351 ---GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 100/219 (45%), Gaps = 38/219 (17%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE------GFQGHKEWLTEINYL 132
VLG GGFG VF A TG L A K+LN++ G+QG + E L
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKIL 239
Query: 133 GQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGS----YFQPLSWSLRMKI 187
++H +V L Y E L LV M G + H++ + +P + +I
Sbjct: 240 AKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLA---RDGPTGDKSHVST 244
+GL LH + +IYRD K N+LLD + N ++SD GLA + G T K +
Sbjct: 299 V----SGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-- 350
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGR 283
GT G+ APE L D ++ GV L E+++ R
Sbjct: 351 ---GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEWLTEINYLGQLHH 137
+GEG FG V +G + + M +A+K N +++L E + Q H
Sbjct: 397 CIGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P++VKL+G E+ ++ E G + + L R S L A + LA+
Sbjct: 451 PHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLIL---YAYQLSTALAY 506
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L S + ++RD A N+L+ SN KL DFGL+R S + + APE
Sbjct: 507 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 563
Query: 258 LATGHLTAKSDIYSFGVVLLEIL 280
+ T+ SD++ FGV + EIL
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F +V V LA++R ++ + + +E ++T E +
Sbjct: 29 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 81
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 82 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 139
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 140 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + + + + +A+K+++ Q + + L EI L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + + + + +A+K+++ Q + + L EI L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+G+G G+V+ + TG +A++++N + + + EI + + +PN
Sbjct: 29 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V + L D +V E++ GS+ + + ++ R L FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH 134
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGL-ARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
S + VI+RD K+ NILL + + KL+DFG A+ P K + ++GT + APE +
Sbjct: 135 SNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVV 189
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGR 283
K DI+S G++ +E++ G
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+G+G G+V+ + TG +A++++N + + + EI + + +PN
Sbjct: 28 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V + L D +V E++ GS+ + + ++ R L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH 133
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGL-ARDGPTGDKSHVSTRVMGTYGYAAPEYL 258
S + VI+RD K+ NILL + + KL+DFG A+ P K + ++GT + APE +
Sbjct: 134 SNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVV 188
Query: 259 ATGHLTAKSDIYSFGVVLLEILSGR 283
K DI+S G++ +E++ G
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 18/204 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+G+G G+V+ + TG +A++++N + + + EI + + +PN
Sbjct: 29 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V + L D +V E++ GS+ + + ++ R L FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH 134
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
S + VI+R+ K+ NILL + + KL+DFG T ++S ST V GT + APE +
Sbjct: 135 SNQ--VIHRNIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSTMV-GTPYWMAPEVVT 190
Query: 260 TGHLTAKSDIYSFGVVLLEILSGR 283
K DI+S G++ +E++ G
Sbjct: 191 RKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + + + + +A+K+++ Q + + L EI L +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSY----FQPLSWSLRMKIALGAA 192
H N++ + D R E M + HL Y Q LS
Sbjct: 100 HENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYG 251
GL ++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T
Sbjct: 155 RGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 252 YAAPEYLATGHLTAKS-DIYSFGVVLLEILSGR 283
Y APE + KS DI+S G +L E+LS R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + + + + +A+K+++ Q + + L EI L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + + + + +A+K+++ Q + + L EI L +
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 81
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 140
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 141 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + + + + +A+K+++ Q + + L EI L +
Sbjct: 37 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 87
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 146
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 147 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + + + + +A+K+++ Q + + L EI L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + + + + +A+K+++ Q + + L EI L +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 158
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 159 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + +L R +A+++++ Q + + L EI L +
Sbjct: 33 SYIGEGAYGMVCSAY---DNLNKVR------VAIRKISPFEHQTYCQRTLREIKILLRFR 83
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 142
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 143 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL-TEINYLGQLHHP 138
LG G FG V V+E S +G+ +K +N++ Q E + EI L L HP
Sbjct: 30 LGSGAFGDV--HLVEERS-------SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 139 NLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
N++K+ ED H + +V E G + + + + LS ++ N LA+
Sbjct: 81 NIIKIFE-VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 198 LHSAEPKVIYRDFKASNILL-DSNYNA--KLSDFGLARDGPTGDKSHVSTRVMGTYGYAA 254
HS V+++D K NIL D++ ++ K+ DFGLA + + ST GT Y A
Sbjct: 140 FHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMA 194
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILSG 282
PE +T K DI+S GVV+ +L+G
Sbjct: 195 PEVFKRD-VTFKCDIWSAGVVMYFLLTG 221
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+GEG G V +A+ R +G L+AVK+++ Q + E+ + H N
Sbjct: 37 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V++ L D +V EF+ G++ + + + ++ + L L+ LH
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 142
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 143 AQ--GVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELIS 198
Query: 260 TGHLTAKSDIYSFGVVLLEILSG 282
+ DI+S G++++E++ G
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + + + + +A+K+++ Q + + L EI L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 138
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 139 YIHSA--NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 121/278 (43%), Gaps = 35/278 (12%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDE---HSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT- 127
+ + P V+G G SV + V H A M + +RL+ E + +E
Sbjct: 94 QKYDPKDVIGRG-VSSVVRRCVHRATGHEFAVK----IMEVTAERLSPEQLEEVREATRR 148
Query: 128 EINYLGQLH-HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
E + L Q+ HP+++ L+ LV++ M +G + ++L + + LS
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA----LSEKETRS 204
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
I ++FLH+ +++RD K NILLD N +LSDFG + G+K +
Sbjct: 205 IMRSLLEAVSFLHAN--NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---EL 259
Query: 247 MGTYGYAAPEYLATGH------LTAKSDIYSFGVVLLEILSG------RRAIDKNRPT-- 292
GT GY APE L + D+++ GV+L +L+G RR I R
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME 319
Query: 293 GEHNLV--EWAKPYLTSKRRIFRVLDPRLEGQFSLPQA 328
G++ EW T K I R+L E + + QA
Sbjct: 320 GQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQA 357
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 15 LGEGAYGEV--------QLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 111
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 309 RRI 311
++I
Sbjct: 232 KKI 234
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 46/229 (20%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYL 132
+F+ ++G GGFG VFK +H + G +KR+ + +E + L
Sbjct: 12 DFKEIELIGSGGFGQVFKA---KHRI------DGKTYVIKRVKYNNEKAERE----VKAL 58
Query: 133 GQLHHPNLVKLVGY---------------------CLEDDHRLLVYEFMPRGSMENHLFR 171
+L H N+V G CL + EF +G++E + +
Sbjct: 59 AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCL-----FIQMEFCDKGTLEQWIEK 113
Query: 172 RGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLA 231
R + L L +++ G+ ++HS K+I RD K SNI L K+ DFGL
Sbjct: 114 RRG--EKLDKVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLV 169
Query: 232 RDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEIL 280
K R GT Y +PE +++ + D+Y+ G++L E+L
Sbjct: 170 TSLKNDGK---RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEWLTEINYLGQLHH 137
+GEG FG V +G + + + +A+K N +++L E + Q H
Sbjct: 19 CIGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 72
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P++VKL+G + ++ ++ E G + + L R S L A + LA+
Sbjct: 73 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAY 128
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L S + ++RD A N+L+ SN KL DFGL+R S + + APE
Sbjct: 129 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 185
Query: 258 LATGHLTAKSDIYSFGVVLLEIL 280
+ T+ SD++ FGV + EIL
Sbjct: 186 INFRRFTSASDVWMFGVCMWEIL 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEWLTEINYLGQLHH 137
+GEG FG V +G + + + +A+K N +++L E + Q H
Sbjct: 14 CIGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 67
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P++VKL+G + ++ ++ E G + + L R S L A + LA+
Sbjct: 68 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAY 123
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L S + ++RD A N+L+ SN KL DFGL+R S + + APE
Sbjct: 124 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 180
Query: 258 LATGHLTAKSDIYSFGVVLLEIL 280
+ T+ SD++ FGV + EIL
Sbjct: 181 INFRRFTSASDVWMFGVCMWEIL 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 14 LGEGAYGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 110
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 309 RRI 311
++I
Sbjct: 231 KKI 233
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 15 LGEGAYGEV--------QLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDR----------IEPDIGMPEPDAQRFF 111
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 309 RRI 311
++I
Sbjct: 232 KKI 234
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 14 LGEGAYGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 110
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 309 RRI 311
++I
Sbjct: 231 KKI 233
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+GEG G V +A+ R +G L+AVK+++ Q + E+ + H N
Sbjct: 39 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V++ L D +V EF+ G++ + + + ++ + L L+ LH
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 144
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 145 AQ--GVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELIS 200
Query: 260 TGHLTAKSDIYSFGVVLLEILSG 282
+ DI+S G++++E++ G
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 16/213 (7%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EIN 130
+F+ +LGEG F + V LA++R ++ + + +E ++T E +
Sbjct: 30 EDFKFGKILGEGSFSTT----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERD 82
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
+ +L HP VKL + +DD +L + G + ++ + GS+ + + +I
Sbjct: 83 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV- 140
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ L +LH +I+RD K NILL+ + + +++DFG A+ K + +GT
Sbjct: 141 ---SALEYLHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y +PE L SD+++ G ++ ++++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 13 LGEGAYGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 109
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 110 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 169
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 170 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 229
Query: 309 RRI 311
++I
Sbjct: 230 KKI 232
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 14 LGEGAYGEV--------QLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDR----------IEPDIGMPEPDAQRFF 110
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 309 RRI 311
++I
Sbjct: 231 KKI 233
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 15 LGEGAYGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 111
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 171
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 309 RRI 311
++I
Sbjct: 232 KKI 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEWLTEINYLGQLHH 137
+GEG FG V +G + + + +A+K N +++L E + Q H
Sbjct: 17 CIGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P++VKL+G + ++ ++ E G + + L R S L A + LA+
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAY 126
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L S + ++RD A N+L+ SN KL DFGL+R S + + APE
Sbjct: 127 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 183
Query: 258 LATGHLTAKSDIYSFGVVLLEIL 280
+ T+ SD++ FGV + EIL
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
+LG G FG V K TG+ +A K + G + +E EI+ + QL H
Sbjct: 96 ILGGGRFGQVHK---------CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
NL++L + +LV E++ G + + + L L MK G+ +
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEGIRHM 203
Query: 199 HSAEPKVIYRDFKASNILLDSNYNA---KLSDFGLARDGPTGDKSHVSTRVMGTYGYAAP 255
H + +++ D K NIL N +A K+ DFGLAR +K V+ GT + AP
Sbjct: 204 H--QMYILHLDLKPENILC-VNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAP 257
Query: 256 EYLATGHLTAKSDIYSFGVVLLEILSG 282
E + ++ +D++S GV+ +LSG
Sbjct: 258 EVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 14 LGEGAYGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 110
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 309 RRI 311
++I
Sbjct: 231 KKI 233
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQL 135
D LG G FGSV +G + +A+K L Q + +E + E + QL
Sbjct: 341 DIELGCGNFGSVRQG-------VYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL 393
Query: 136 HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
+P +V+L+G C + + +LV E G + H F G + + S ++ + G+
Sbjct: 394 DNPYIVRLIGVC-QAEALMLVMEMAGGGPL--HKFLVGKR-EEIPVSNVAELLHQVSMGM 449
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY--GYA 253
+L E ++R+ A N+LL + + AK+SDFGL++ D S+ + R G + +
Sbjct: 450 KYLE--EKNFVHRNLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWY 506
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILS 281
APE + +++SD++S+GV + E LS
Sbjct: 507 APECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 15 LGEGAYGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 111
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 309 RRI 311
++I
Sbjct: 232 KKI 234
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+GEG G V +A+ R +G L+AVK+++ Q + E+ + H N
Sbjct: 82 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V++ L D +V EF+ G++ + + + ++ + L L+ LH
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 187
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV------MGTYGYA 253
+ VI+RD K+ +ILL + KLSDFG + VS V +GT +
Sbjct: 188 AQ--GVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEVPRRKXLVGTPYWM 237
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE ++ + DI+S G++++E++ G
Sbjct: 238 APELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLHHP 138
+GEG +G V + +H + TR +A+K+++ Q + + L EI L + H
Sbjct: 51 IGEGAYGMVSSAY--DH-VRKTR------VAIKKISPFEHQTYCQRTLREIQILLRFRHE 101
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N++ + + ++ + ME L++ Q LS GL ++
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS-QQLSNDHICYFLYQILRGLKYI 160
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAPEY 257
HSA V++RD K SN+L+++ + K+ DFGLAR P D + T + T Y APE
Sbjct: 161 HSA--NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 258 LATGHLTAKS-DIYSFGVVLLEILSGR 283
+ KS DI+S G +L E+LS R
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEWLTEINYLGQLHH 137
+GEG FG V +G + + + +A+K N +++L E + Q H
Sbjct: 20 CIGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 73
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P++VKL+G + ++ ++ E G + + L R S L A + LA+
Sbjct: 74 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAY 129
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L S + ++RD A N+L+ SN KL DFGL+R S + + APE
Sbjct: 130 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 186
Query: 258 LATGHLTAKSDIYSFGVVLLEIL 280
+ T+ SD++ FGV + EIL
Sbjct: 187 INFRRFTSASDVWMFGVCMWEIL 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 15 LGEGAYGEV--------QLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDR----------IEPDIGMPEPDAQRFF 111
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 309 RRI 311
++I
Sbjct: 232 KKI 234
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 15 LGEGAYGEV--------QLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDR----------IEPDIGMPEPDAQRFF 111
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 309 RRI 311
++I
Sbjct: 232 KKI 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + + + + +A+K+++ Q + + L EI L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 140
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 141 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 15 LGEGAYGEV--------QLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDR----------IEPDIGMPEPDAQRFF 111
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 309 RRI 311
++I
Sbjct: 232 KKI 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTLGTGSFGRV---------MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL Y +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 153 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 14 LGEGAYGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 110
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 309 RRI 311
++I
Sbjct: 231 KKI 233
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTLGTGSFGRV---------MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL Y +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 153 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTLGTGSFGRV---------MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL Y +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 153 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 71 TRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG---HKEWLT 127
+ +F+ S+LGEG +G V ++T TG ++A+K++ E F L
Sbjct: 10 SSDFQLKSLLGEGAYGVV---------CSATHKPTGEIVAIKKI--EPFDKPLFALRTLR 58
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
EI L H N++ + D ++ + M+ L R S Q LS
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYF 117
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR---------DGPTGD 238
+ LH + VI+RD K SN+L++SN + K+ DFGLAR PTG
Sbjct: 118 IYQTLRAVKVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 239 KSHVSTRVMGTYGYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGR 283
+S + + T Y APE + T +++ D++S G +L E+ R
Sbjct: 176 QSGM-VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 14 LGEGAYGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 110
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 309 RRI 311
++I
Sbjct: 231 KKI 233
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 14 LGEGAYGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 110
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 309 RRI 311
++I
Sbjct: 231 KKI 233
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 14 LGEGAYGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 110
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 309 RRI 311
++I
Sbjct: 231 KKI 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 15 LGEGAYGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 111
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 309 RRI 311
++I
Sbjct: 232 KKI 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ KE L E
Sbjct: 43 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E+ P G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+++D K++DFGLA+ V R +
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEWLTEINYLGQLHH 137
+GEG FG V +G + + + +A+K N +++L E + Q H
Sbjct: 45 CIGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 98
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P++VKL+G + ++ ++ E G + + L R S L A + LA+
Sbjct: 99 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAY 154
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L S + ++RD A N+L+ SN KL DFGL+R S + + APE
Sbjct: 155 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 211
Query: 258 LATGHLTAKSDIYSFGVVLLEIL 280
+ T+ SD++ FGV + EIL
Sbjct: 212 INFRRFTSASDVWMFGVCMWEIL 234
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 14 LGEGAYGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 110
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 309 RRI 311
++I
Sbjct: 231 KKI 233
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEWLTEINYLGQLHH 137
+GEG FG V +G + + + +A+K N +++L E + Q H
Sbjct: 22 CIGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 75
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P++VKL+G + ++ ++ E G + + L R S L A + LA+
Sbjct: 76 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAY 131
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L S + ++RD A N+L+ SN KL DFGL+R S + + APE
Sbjct: 132 LESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 188
Query: 258 LATGHLTAKSDIYSFGVVLLEIL 280
+ T+ SD++ FGV + EIL
Sbjct: 189 INFRRFTSASDVWMFGVCMWEIL 211
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + + + + +A+K+++ Q + + L EI L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 140
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + T + T Y AP
Sbjct: 141 YIHSA--NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F +G G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTIGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E+MP G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D K++DFG A+ V R +
Sbjct: 153 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+GEG G V +A+ R +G L+AVK+++ Q + E+ + H N
Sbjct: 28 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V++ L D +V EF+ G++ + + + ++ + L L+ LH
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 133
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 134 AQ--GVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELIS 189
Query: 260 TGHLTAKSDIYSFGVVLLEILSG 282
+ DI+S G++++E++ G
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 95/219 (43%), Gaps = 33/219 (15%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 14 LGEGAYGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 110
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK 288
Y APE L A+ D++S G+VL +L+G D+
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F +G G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTIGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E+MP G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D K++DFG A+ V R +
Sbjct: 153 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + +L R +A+K+++ Q + + L EI L +
Sbjct: 33 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 142
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + + T Y AP
Sbjct: 143 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-KEWLTEINYLGQLH 136
S +GEG +G V + +L R +A+K+++ Q + + L EI L +
Sbjct: 34 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N++ + + ++ + ME L++ Q LS GL
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLK 143
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG-PTGDKSHVSTRVMGTYGYAAP 255
++HSA V++RD K SN+LL++ + K+ DFGLAR P D + + T Y AP
Sbjct: 144 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 256 EYLATGHLTAKS-DIYSFGVVLLEILSGR 283
E + KS DI+S G +L E+LS R
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG +G V LA R T +AVK ++ + E + EI L+H
Sbjct: 14 LGEGAYGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 110
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 309 RRI 311
++I
Sbjct: 231 KKI 233
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+GEG G V +A+ R +G L+AVK+++ Q + E+ + H N
Sbjct: 32 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V++ L D +V EF+ G++ + + + ++ + L L+ LH
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 137
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA 259
+ VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 138 AQ--GVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELIS 193
Query: 260 TGHLTAKSDIYSFGVVLLEILSG 282
+ DI+S G++++E++ G
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLN-QEGFQGHK----E 124
A + + + +GEG +G VFK A G +A+KR+ Q G +G
Sbjct: 9 ADQQYECVAEIGEGAYGKVFK--------ARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 125 WLTEINYLGQLHHPNLVKLVGYCL-----EDDHRLLVYEFMPRGSMENHLFRRGSYFQPL 179
+ + +L HPN+V+L C + LV+E + + + +L + P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119
Query: 180 SWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDK 239
M L GL FLHS +V++RD K NIL+ S+ KL+DFGLAR
Sbjct: 120 ETIKDMMFQL--LRGLDFLHSH--RVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSF 172
Query: 240 SHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEIL 280
T V+ T Y APE L D++S G + E+
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLN-QEGFQGHK----E 124
A + + + +GEG +G VFK A G +A+KR+ Q G +G
Sbjct: 9 ADQQYECVAEIGEGAYGKVFK--------ARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 125 WLTEINYLGQLHHPNLVKLVGYCL-----EDDHRLLVYEFMPRGSMENHLFRRGSYFQPL 179
+ + +L HPN+V+L C + LV+E + + + +L + P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119
Query: 180 SWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDK 239
M L GL FLHS +V++RD K NIL+ S+ KL+DFGLAR
Sbjct: 120 ETIKDMMFQL--LRGLDFLHSH--RVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSF 172
Query: 240 SHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEIL 280
T V+ T Y APE L D++S G + E+
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 110/253 (43%), Gaps = 44/253 (17%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL----NQEGFQGHKEWLTEINYLGQL 135
+GEG +G+VFK E T ++A+KR+ + EG L EI L +L
Sbjct: 10 IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSA--LREICLLKEL 58
Query: 136 HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIA----LGA 191
H N+V+L D LV+EF + + YF + L +I
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKK--------YFDSCNGDLDPEIVKSFLFQL 110
Query: 192 ANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYG 251
GL F HS V++RD K N+L++ N KL+DFGLAR + + + V T
Sbjct: 111 LKGLGFCHSR--NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLW 166
Query: 252 YAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
Y P+ L L + S D++S G + E+ + RP N V+ +R
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAA------RPLFPGNDVD------DQLKR 214
Query: 311 IFRVLDPRLEGQF 323
IFR+L E Q+
Sbjct: 215 IFRLLGTPTEEQW 227
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 51/238 (21%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYL 132
+F+ ++G GGFG VFK +H + G ++R+ + +E + L
Sbjct: 13 DFKEIELIGSGGFGQVFKA---KHRI------DGKTYVIRRVKYNNEKAERE----VKAL 59
Query: 133 GQLHHPNLVKLVGYCLE---------DDHR---------------------LLVYEFMPR 162
+L H N+V G C + DD + EF +
Sbjct: 60 AKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 163 GSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN 222
G++E + +R + L L +++ G+ ++HS K+I+RD K SNI L
Sbjct: 119 GTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLVDTKQ 174
Query: 223 AKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEIL 280
K+ DFGL K TR GT Y +PE +++ + D+Y+ G++L E+L
Sbjct: 175 VKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 101/233 (43%), Gaps = 41/233 (17%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL 126
RT R +G+G FG V++G W E +AVK + + + W
Sbjct: 38 RTIARTIVLQESIGKGRFGEVWRGKWRGEE------------VAVKIFSS---REERSWF 82
Query: 127 --TEINYLGQLHHPNLVKLVGYCLEDD----HRLLVYEFMPRGSMENHLFRRGSYFQPLS 180
EI L H N++ + +D+ LV ++ GS+ ++L R + +
Sbjct: 83 REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM- 141
Query: 181 WSLRMKIALGAANGLAFLH------SAEPKVIYRDFKASNILLDSNYNAKLSDFGLA--R 232
+K+AL A+GLA LH +P + +RD K+ NIL+ N ++D GLA
Sbjct: 142 ----IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 197
Query: 233 DGPTGDKSHVSTRVMGTYGYAAPEYLATG----HLTA--KSDIYSFGVVLLEI 279
D T +GT Y APE L H + ++DIY+ G+V EI
Sbjct: 198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 101/233 (43%), Gaps = 41/233 (17%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL 126
RT R +G+G FG V++G W E +AVK + + + W
Sbjct: 25 RTIARTIVLQESIGKGRFGEVWRGKWRGEE------------VAVKIFSS---REERSWF 69
Query: 127 --TEINYLGQLHHPNLVKLVGYCLEDD----HRLLVYEFMPRGSMENHLFRRGSYFQPLS 180
EI L H N++ + +D+ LV ++ GS+ ++L R + +
Sbjct: 70 REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM- 128
Query: 181 WSLRMKIALGAANGLAFLH------SAEPKVIYRDFKASNILLDSNYNAKLSDFGLA--R 232
+K+AL A+GLA LH +P + +RD K+ NIL+ N ++D GLA
Sbjct: 129 ----IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 184
Query: 233 DGPTGDKSHVSTRVMGTYGYAAPEYLATG----HLTA--KSDIYSFGVVLLEI 279
D T +GT Y APE L H + ++DIY+ G+V EI
Sbjct: 185 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLN-QEGFQGHK----E 124
A + + + +GEG +G VFK A G +A+KR+ Q G +G
Sbjct: 9 ADQQYECVAEIGEGAYGKVFK--------ARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 125 WLTEINYLGQLHHPNLVKLVGYCL-----EDDHRLLVYEFMPRGSMENHLFRRGSYFQPL 179
+ + +L HPN+V+L C + LV+E + + + +L + P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119
Query: 180 SWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDK 239
M L GL FLHS +V++RD K NIL+ S+ KL+DFGLAR
Sbjct: 120 ETIKDMMFQL--LRGLDFLHSH--RVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSF 172
Query: 240 SHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEIL 280
T V+ T Y APE L D++S G + E+
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 107/242 (44%), Gaps = 44/242 (18%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE--- 124
R R + LG+G +G V+K S TG ++AVK++ + FQ +
Sbjct: 5 RHVLRKYELVKKLGKGAYGIVWK---------SIDRRTGEVVAVKKI-FDAFQNSTDAQR 54
Query: 125 WLTEINYLGQLH-HPNLVKLVGYCLEDDHR--LLVYEFMPRGSMENHLFRRGSYFQPLSW 181
EI L +L H N+V L+ D+ R LV+++M + H R + +P+
Sbjct: 55 TFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVH- 110
Query: 182 SLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPT----- 236
+ + + +LHS +++RD K SNILL++ + K++DFGL+R
Sbjct: 111 --KQYVVYQLIKVIKYLHSG--GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVT 166
Query: 237 --------------GDKSHVSTRVMGTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILS 281
D + T + T Y APE L + T D++S G +L EIL
Sbjct: 167 NNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC 226
Query: 282 GR 283
G+
Sbjct: 227 GK 228
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT 127
RT R +G+G +G V++G S+A + I R Q F+ T
Sbjct: 4 RTVARQVALVECVGKGRYGEVWRGLWHGESVA-------VKIFSSRDEQSWFRE-----T 51
Query: 128 EINYLGQLHHPNLVKLVGYCL----EDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
EI L H N++ + + L+ + GS+ + L R Q L L
Sbjct: 52 EIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR-----QTLEPHL 106
Query: 184 RMKIALGAANGLAFLH------SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTG 237
+++A+ AA GLA LH +P + +RDFK+ N+L+ SN ++D GLA G
Sbjct: 107 ALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQG 166
Query: 238 -DKSHVSTR-VMGTYGYAAPEYLATGHLT------AKSDIYSFGVVLLEILSGRRAI 286
D + +GT Y APE L T +DI++FG+VL EI RR I
Sbjct: 167 SDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 35/231 (15%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEIN 130
+F P LG GGFG VF K VD+ + A R ++ N+E ++ + E+
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKR--------IRLPNRE--LAREKVMREVK 55
Query: 131 YLGQLHHPNLVKLVGYCLEDDH---------RLLVYEFMPRGSMEN--HLFRRGSYFQPL 179
L +L HP +V+ LE + ++ +Y M EN +
Sbjct: 56 ALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER 115
Query: 180 SWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGL--ARDGPTG 237
S+ + I L A + FLHS +++RD K SNI + K+ DFGL A D
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSK--GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE 173
Query: 238 DKSHVS--------TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEIL 280
+++ ++ T +GT Y +PE + + K DI+S G++L E+L
Sbjct: 174 EQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 36 FERIKTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 86
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 87 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 145
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR--DGPTGDKSHVSTRVM 247
+LHS + +IYRD K N+L+D +++DFG A+ G T +
Sbjct: 146 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-------XLC 192
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRP 291
GT Y APE + + D ++ GV++ E+ +G ++P
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ KE L E
Sbjct: 43 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E+ P G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+++D +++DFGLA+ V R +
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 122 HKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSW 181
H+E EI+ L L HPN++KL + + LV EF G + + R + + +
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 182 SLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSN---YNAKLSDFGLARDGPTGD 238
++ +I +G+ +LH + +++RD K NILL++ N K+ DFGL+
Sbjct: 150 NIMKQI----LSGICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFGLS---SFFS 200
Query: 239 KSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
K + +GT Y APE L + K D++S GV++ +L G
Sbjct: 201 KDYKLRDRLGTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCG 243
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 127/294 (43%), Gaps = 46/294 (15%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINY- 131
N + ++G G +G+V+KG +DE RP +AVK + F + ++ E N
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE------RP-----VAVKVFS---FANRQNFINEKNIY 59
Query: 132 -LGQLHHPNLVKLV--GYCLEDDHR---LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRM 185
+ + H N+ + + + D R LLV E+ P GS+ +L S W
Sbjct: 60 RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSC 114
Query: 186 KIALGAANGLAFLHSA-------EPKVIYRDFKASNILLDSNYNAKLSDFGLA------R 232
++A GLA+LH+ +P + +RD + N+L+ ++ +SDFGL+ R
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174
Query: 233 DGPTGDKSHVSTRVMGTYGYAAPEYLATG-------HLTAKSDIYSFGVVLLEILSGRRA 285
G++ + + +GT Y APE L + D+Y+ G++ EI
Sbjct: 175 LVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTD 234
Query: 286 IDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCL 339
+ E+ + + +VL R + + P+A K SLA++ L
Sbjct: 235 LFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSL 288
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 44 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 95 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 154 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRP 291
GT Y APE + + D ++ GV++ E+ +G ++P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 105/243 (43%), Gaps = 34/243 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-EINYLGQLHHP 138
LGEG G V LA R T +AVK ++ + E + EI L+H
Sbjct: 14 LGEGAAGEV--------QLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+VK G+ E + + L E+ G LF R + I + + F
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGE----LFDR----------IEPDIGMPEPDAQRFF 110
Query: 199 HSAEPKVIY--------RDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
H V+Y RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 251 GYAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDK-NRPTGEHNLVEWAKPYLTSK 308
Y APE L A+ D++S G+VL +L+G D+ + E++ + K YL
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 309 RRI 311
++I
Sbjct: 231 KKI 233
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEWLTEINYLGQLHH 137
+GEG FG V +G + + M +A+K N +++L E + Q H
Sbjct: 17 CIGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P++VKL+G + ++ ++ E G + + L R S L A + LA+
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLIL---YAYQLSTALAY 126
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L S + ++RD A N+L+ + KL DFGL+R S + + APE
Sbjct: 127 LESK--RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 183
Query: 258 LATGHLTAKSDIYSFGVVLLEIL 280
+ T+ SD++ FGV + EIL
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 153 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 153 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 44 FERIKTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 95 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 154 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 64 FERIKTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 114
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 115 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 173
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 174 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 219
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRP 291
GT Y APE + + D ++ GV++ E+ +G ++P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 44 FERIKTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 95 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 154 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 44 FERIKTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 95 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 154 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRP 291
GT Y APE + + D ++ GV++ E+ +G ++P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 36 FERIKTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 86
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 87 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 145
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR--DGPTGDKSHVSTRVM 247
+LHS + +IYRD K N+L+D +++DFG A+ G T +
Sbjct: 146 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-------XLC 192
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRP 291
GT Y APE + + D ++ GV++ E+ +G ++P
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEWLTEINYLGQLHH 137
+GEG FG V +G + + M +A+K N +++L E + Q H
Sbjct: 397 CIGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P++VKL+G E+ ++ E G + + L R S L A + LA+
Sbjct: 451 PHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLIL---YAYQLSTALAY 506
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L S + ++RD A N+L+ + KL DFGL+R S + + APE
Sbjct: 507 LESK--RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPES 563
Query: 258 LATGHLTAKSDIYSFGVVLLEIL 280
+ T+ SD++ FGV + EIL
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 44 FERIKTLGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E+ P G M +HL R G + +P + +I L
Sbjct: 95 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+++D K++DFG A+ V R +
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F +G G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTIGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D K++DFG A+ V R +
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E+ P G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+++D K++DFG A+ V R +
Sbjct: 153 ----TFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL--NQEGFQGHKEWLTEINYLGQLHH 137
+GEG +G VFK TG ++A+K+ +++ K L EI L QL H
Sbjct: 11 IGEGSYGVVFK---------CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSM-ENHLFRRG---SYFQPLSWSLRMKIALGAAN 193
PNLV L+ LV+E+ + E ++RG + ++W L A N
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ-----TLQAVN 116
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
F H I+RD K NIL+ + KL DFG AR TG + V T Y
Sbjct: 117 ---FCHKH--NCIHRDVKPENILITKHSVIKLCDFGFAR-LLTGPSDYYDDEV-ATRWYR 169
Query: 254 APEYLA-TGHLTAKSDIYSFGVVLLEILSG 282
+PE L D+++ G V E+LSG
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 153 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 44 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 95 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 154 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRP 291
GT Y APE + + D ++ GV++ E+ +G ++P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 153 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRP 291
GT Y APE + + D ++ GV++ E+ +G ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 44 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 95 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+LHS + +IYRD K N+L+D +++DFG A+ K T + GT
Sbjct: 154 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWT-LCGT 202
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y APE + + D ++ GV++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 153 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 25/222 (11%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 29 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 79
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++P G M +HL R G + +P + +I L
Sbjct: 80 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 138
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+LHS + +IYRD K N+L+D +++DFG A+ K T + GT
Sbjct: 139 ----TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWT-LCGT 187
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRP 291
Y APE + + D ++ GV++ E+ +G ++P
Sbjct: 188 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 108/251 (43%), Gaps = 47/251 (18%)
Query: 55 QSSNIKNF---------SYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGT 105
++ NI NF DLR ++ V+G G FG V + H STR
Sbjct: 48 KNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEV---QLVRHK--STRKVY 102
Query: 106 GMLI-----AVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEF 159
M + +KR + F ++ + N P +V+L Y +DD L +V E+
Sbjct: 103 AMKLLSKFEMIKRSDSAFFWEERDIMAFAN------SPWVVQLF-YAFQDDRYLYMVMEY 155
Query: 160 MPRGSMENHLFRRGSYFQPLSW----SLRMKIALGAANGLAFLHSAEPKVIYRDFKASNI 215
MP G + N + +Y P W + + +AL A + + F+H RD K N+
Sbjct: 156 MPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDAIHSMGFIH--------RDVKPDNM 204
Query: 216 LLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLAT----GHLTAKSDIYS 271
LLD + + KL+DFG T V GT Y +PE L + G+ + D +S
Sbjct: 205 LLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWS 263
Query: 272 FGVVLLEILSG 282
GV L E+L G
Sbjct: 264 VGVFLYEMLVG 274
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 110/253 (43%), Gaps = 44/253 (17%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL----NQEGFQGHKEWLTEINYLGQL 135
+GEG +G+VFK E T ++A+KR+ + EG L EI L +L
Sbjct: 10 IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSA--LREICLLKEL 58
Query: 136 HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIA----LGA 191
H N+V+L D LV+EF + + YF + L +I
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKK--------YFDSCNGDLDPEIVKSFLFQL 110
Query: 192 ANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYG 251
GL F HS V++RD K N+L++ N KL++FGLAR + + + V T
Sbjct: 111 LKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLW 166
Query: 252 YAAPEYLATGHLTAKS-DIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
Y P+ L L + S D++S G + E+ + RP N V+ +R
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANA------GRPLFPGNDVD------DQLKR 214
Query: 311 IFRVLDPRLEGQF 323
IFR+L E Q+
Sbjct: 215 IFRLLGTPTEEQW 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E+ P G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+++D K++DFG A+ V R +
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 108/251 (43%), Gaps = 47/251 (18%)
Query: 55 QSSNIKNF---------SYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGT 105
++ NI NF DLR ++ V+G G FG V + H STR
Sbjct: 48 KNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEV---QLVRHK--STRKVY 102
Query: 106 GMLI-----AVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEF 159
M + +KR + F ++ + N P +V+L Y +DD L +V E+
Sbjct: 103 AMKLLSKFEMIKRSDSAFFWEERDIMAFAN------SPWVVQLF-YAFQDDRYLYMVMEY 155
Query: 160 MPRGSMENHLFRRGSYFQPLSW----SLRMKIALGAANGLAFLHSAEPKVIYRDFKASNI 215
MP G + N + +Y P W + + +AL A + + F+H RD K N+
Sbjct: 156 MPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDAIHSMGFIH--------RDVKPDNM 204
Query: 216 LLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLAT----GHLTAKSDIYS 271
LLD + + KL+DFG T V GT Y +PE L + G+ + D +S
Sbjct: 205 LLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWS 263
Query: 272 FGVVLLEILSG 282
GV L E+L G
Sbjct: 264 VGVFLYEMLVG 274
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 100/232 (43%), Gaps = 41/232 (17%)
Query: 69 TATRNFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL- 126
T R +G+G FG V++G W E +AVK + + + W
Sbjct: 1 TIARTIVLQESIGKGRFGEVWRGKWRGEE------------VAVKIFSS---REERSWFR 45
Query: 127 -TEINYLGQLHHPNLVKLVGYCLEDD----HRLLVYEFMPRGSMENHLFRRGSYFQPLSW 181
EI L H N++ + +D+ LV ++ GS+ ++L R + +
Sbjct: 46 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-- 103
Query: 182 SLRMKIALGAANGLAFLH------SAEPKVIYRDFKASNILLDSNYNAKLSDFGLA--RD 233
+K+AL A+GLA LH +P + +RD K+ NIL+ N ++D GLA D
Sbjct: 104 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 160
Query: 234 GPTGDKSHVSTRVMGTYGYAAPEYLATG----HLTA--KSDIYSFGVVLLEI 279
T +GT Y APE L H + ++DIY+ G+V EI
Sbjct: 161 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 108/251 (43%), Gaps = 47/251 (18%)
Query: 55 QSSNIKNF---------SYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGT 105
++ NI NF DLR ++ V+G G FG V + H STR
Sbjct: 43 KNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEV---QLVRHK--STRKVY 97
Query: 106 GMLI-----AVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEF 159
M + +KR + F ++ + N P +V+L Y +DD L +V E+
Sbjct: 98 AMKLLSKFEMIKRSDSAFFWEERDIMAFAN------SPWVVQLF-YAFQDDRYLYMVMEY 150
Query: 160 MPRGSMENHLFRRGSYFQPLSW----SLRMKIALGAANGLAFLHSAEPKVIYRDFKASNI 215
MP G + N + +Y P W + + +AL A + + F+H RD K N+
Sbjct: 151 MPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDAIHSMGFIH--------RDVKPDNM 199
Query: 216 LLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLAT----GHLTAKSDIYS 271
LLD + + KL+DFG T V GT Y +PE L + G+ + D +S
Sbjct: 200 LLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWS 258
Query: 272 FGVVLLEILSG 282
GV L E+L G
Sbjct: 259 VGVFLYEMLVG 269
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 100/232 (43%), Gaps = 41/232 (17%)
Query: 69 TATRNFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL- 126
T R +G+G FG V++G W E +AVK + + + W
Sbjct: 3 TIARTIVLQESIGKGRFGEVWRGKWRGEE------------VAVKIFSS---REERSWFR 47
Query: 127 -TEINYLGQLHHPNLVKLVGYCLEDD----HRLLVYEFMPRGSMENHLFRRGSYFQPLSW 181
EI L H N++ + +D+ LV ++ GS+ ++L R + +
Sbjct: 48 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-- 105
Query: 182 SLRMKIALGAANGLAFLH------SAEPKVIYRDFKASNILLDSNYNAKLSDFGLA--RD 233
+K+AL A+GLA LH +P + +RD K+ NIL+ N ++D GLA D
Sbjct: 106 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 162
Query: 234 GPTGDKSHVSTRVMGTYGYAAPEYLATG----HLTA--KSDIYSFGVVLLEI 279
T +GT Y APE L H + ++DIY+ G+V EI
Sbjct: 163 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 100/232 (43%), Gaps = 41/232 (17%)
Query: 69 TATRNFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL- 126
T R +G+G FG V++G W E +AVK + + + W
Sbjct: 6 TIARTIVLQESIGKGRFGEVWRGKWRGEE------------VAVKIFSS---REERSWFR 50
Query: 127 -TEINYLGQLHHPNLVKLVGYCLEDD----HRLLVYEFMPRGSMENHLFRRGSYFQPLSW 181
EI L H N++ + +D+ LV ++ GS+ ++L R + +
Sbjct: 51 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-- 108
Query: 182 SLRMKIALGAANGLAFLH------SAEPKVIYRDFKASNILLDSNYNAKLSDFGLA--RD 233
+K+AL A+GLA LH +P + +RD K+ NIL+ N ++D GLA D
Sbjct: 109 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 165
Query: 234 GPTGDKSHVSTRVMGTYGYAAPEYLATG----HLTA--KSDIYSFGVVLLEI 279
T +GT Y APE L H + ++DIY+ G+V EI
Sbjct: 166 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 24/209 (11%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE--WLTEINYLGQLH 136
+LG+G FG V K T AVK +N+ + L E+ L +L
Sbjct: 29 MLGKGSFGEVLK---------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
HPN++KL + +V E G + + + +R + S +I +G+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRF----SEHDAARIIKQVFSGIT 135
Query: 197 FLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
++H + +++RD K NILL+S + + K+ DFGL+ K + R+ GT Y
Sbjct: 136 YMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRI-GTAYYI 190
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE L G K D++S GV+L +LSG
Sbjct: 191 APEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 33 SPIGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 137
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 138 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 191
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 192 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 155 LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASN 214
+V E++ ++ + + G P++ +++ A L F H + +I+RD K +N
Sbjct: 93 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPAN 146
Query: 215 ILLDSNYNAKLSDFGLARD-GPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFG 273
IL+ + K+ DFG+AR +G+ + V+GT Y +PE + A+SD+YS G
Sbjct: 147 ILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 274 VVLLEILSGRRAIDKNRPT 292
VL E+L+G + P
Sbjct: 207 CVLYEVLTGEPPFTGDSPV 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKX----QKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH--KEWLTEINYLGQL 135
+LG+G FG V K T AVK +N+ + L E+ L +L
Sbjct: 28 CMLGKGSFGEVLK---------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 136 HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
HPN++KL + +V E G + + + +R + + + +I +G+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA----ARIIKQVFSGI 134
Query: 196 AFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
++H + +++RD K NILL+S + + K+ DFGL+ K + R+ GT Y
Sbjct: 135 TYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRI-GTAYY 189
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE L G K D++S GV+L +LSG
Sbjct: 190 IAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH--KEWLTEINYLGQL 135
+LG+G FG V K T AVK +N+ + L E+ L +L
Sbjct: 28 CMLGKGSFGEVLK---------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 136 HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
HPN++KL + +V E G + + + +R + + + +I +G+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA----ARIIKQVFSGI 134
Query: 196 AFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
++H + +++RD K NILL+S + + K+ DFGL+ K + R+ GT Y
Sbjct: 135 TYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRI-GTAYY 189
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE L G K D++S GV+L +LSG
Sbjct: 190 IAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 9/187 (4%)
Query: 102 RPGTGMLIAVKRLNQEGF-QGHKEWL-TEINYLGQLHHPNLVKLVGYCLEDDHRLL--VY 157
R G ++ K L+ + K+ L +E+N L +L HPN+V+ ++ + L V
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 158 EFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEP---KVIYRDFKASN 214
E+ G + + + + Q L +++ L H V++RD K +N
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 215 ILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGV 274
+ LD N KL DFGLAR D S T V GT Y +PE + KSDI+S G
Sbjct: 147 VFLDGKQNVKLGDFGLAR-ILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWSLGC 204
Query: 275 VLLEILS 281
+L E+ +
Sbjct: 205 LLYELCA 211
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 104/241 (43%), Gaps = 41/241 (17%)
Query: 128 EINYLGQLHHPNLVKLVGY----CLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
E+ L + H N+++ +G D L+ F +GS+ + L +SW+
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNE 122
Query: 184 RMKIALGAANGLAFLHSA--------EPKVIYRDFKASNILLDSNYNAKLSDFGLARDGP 235
IA A GLA+LH +P + +RD K+ N+LL +N A ++DFGLA
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182
Query: 236 TGDKSHVSTRVMGTYGYAAPEYLATG-----HLTAKSDIYSFGVVLLEILSGRRAIDK-- 288
G + + +GT Y APE L + D+Y+ G+VL E+ S A D
Sbjct: 183 AGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV 242
Query: 289 -------NRPTGEHNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSV 341
G+H +E + + K++ P L + QK A +A+ C ++
Sbjct: 243 DEYMLPFEEEIGQHPSLEDMQEVVVHKKK-----RPVLRDYW-----QKHAGMAMLCETI 292
Query: 342 E 342
E
Sbjct: 293 E 293
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKX----QKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 35 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 139
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 140 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR---- 193
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 194 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 35 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 139
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 140 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR---- 193
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 194 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 33 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 137
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 138 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 191
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 192 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 40 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHM 90
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 144
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 145 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 198
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 199 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 33 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 137
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 138 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 191
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 192 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 27 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 77
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 78 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 131
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 132 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 185
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 186 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 30 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 134
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 135 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 188
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 189 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQLHH 137
+G G +G V ++ R TG +A+K++ + K L E+ L H
Sbjct: 63 IGNGAYGVVS---------SARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 113
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGS----------MENHLFRRGSYFQPLSWSLRMKI 187
N++ + + ++ +P G ME+ L + QPL+
Sbjct: 114 DNIIAI---------KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF 164
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH--VSTR 245
GL ++HSA+ VI+RD K SN+L++ N K+ DFG+AR T H T
Sbjct: 165 LYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 222
Query: 246 VMGTYGYAAPEYLATGH-LTAKSDIYSFGVVLLEILSGRR 284
+ T Y APE + + H T D++S G + E+L+ R+
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 35 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 139
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 140 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR---- 193
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 194 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 35 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 139
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 140 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 193
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 194 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 34 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 138
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 139 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 192
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 33 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 137
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 138 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 191
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 192 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 39 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 143
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 144 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 197
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 198 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 44 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P L KL + +D+ L +V E+ P G M +HL R G + +P + +I L
Sbjct: 95 ILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+++D K++DFG A+ V R +
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 34 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 138
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 139 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 192
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 30 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 134
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 135 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 188
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 189 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 30 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 134
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 135 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 188
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 189 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 51 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 155
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 156 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 209
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 210 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 39 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 143
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 144 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 197
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 198 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 24 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 128
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 129 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 182
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 183 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 40 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 144
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 145 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 198
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 199 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQLHH 137
+G G +G V ++ R TG +A+K++ + K L E+ L H
Sbjct: 62 IGNGAYGVVS---------SARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 112
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGS----------MENHLFRRGSYFQPLSWSLRMKI 187
N++ + + ++ +P G ME+ L + QPL+
Sbjct: 113 DNIIAI---------KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF 163
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH--VSTR 245
GL ++HSA+ VI+RD K SN+L++ N K+ DFG+AR T H T
Sbjct: 164 LYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 221
Query: 246 VMGTYGYAAPEYLATGH-LTAKSDIYSFGVVLLEILSGRR 284
+ T Y APE + + H T D++S G + E+L+ R+
Sbjct: 222 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 40 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 144
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 145 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 198
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 199 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 41/221 (18%)
Query: 80 LGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL--TEINYLGQLH 136
+G+G FG V++G W E +AVK + + + W EI L
Sbjct: 11 IGKGRFGEVWRGKWRGEE------------VAVKIFSS---REERSWFREAEIYQTVMLR 55
Query: 137 HPNLVKLVGYCLEDD----HRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAA 192
H N++ + +D+ LV ++ GS+ ++L R + + +K+AL A
Sbjct: 56 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTA 110
Query: 193 NGLAFLH------SAEPKVIYRDFKASNILLDSNYNAKLSDFGLA--RDGPTGDKSHVST 244
+GLA LH +P + +RD K+ NIL+ N ++D GLA D T
Sbjct: 111 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPN 170
Query: 245 RVMGTYGYAAPEYLATG----HLTA--KSDIYSFGVVLLEI 279
+GT Y APE L H + ++DIY+ G+V EI
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 30 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 134
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 135 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR---- 188
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 189 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 25 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 129
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 130 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 183
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 184 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E+ P G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+++D +++DFG A+ V R +
Sbjct: 153 ----TFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRP 291
GT Y APE + + D ++ GV++ E+ +G ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 47 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 151
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 152 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 205
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 206 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 25 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 129
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 130 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 183
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 184 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 48 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 153 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 206
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 207 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV +S +G+ IAVK+L++ + K E+ L +
Sbjct: 57 SPVGSGAYGSV---------CSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM 107
Query: 136 HHPNLVKLV-----GYCLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 161
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 162 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 215
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 216 -WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 119 FQGHKEWLTEINYLGQ--LHHPNLVKLV-----GYCLEDDHRLLVYEFMPRGSMENHLFR 171
Q + W +E + H NL++ + G LE + L+ F +GS+ ++L
Sbjct: 48 LQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVE-LWLITAFHDKGSLTDYL-- 104
Query: 172 RGSYFQPLSWSLRMKIALGAANGLAFLHSA---------EPKVIYRDFKASNILLDSNYN 222
+G+ ++W+ +A + GL++LH +P + +RDFK+ N+LL S+
Sbjct: 105 KGNI---ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLT 161
Query: 223 AKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATG-----HLTAKSDIYSFGVVLL 277
A L+DFGLA G + +GT Y APE L + D+Y+ G+VL
Sbjct: 162 AVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLW 221
Query: 278 EILSGRRAIDKNRPTGEHNL 297
E++S +A D P E+ L
Sbjct: 222 ELVSRCKAADG--PVDEYML 239
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 34 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 138
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 139 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR---- 192
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 51 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 155
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 156 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR---- 209
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 210 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 26 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 76
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 77 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 130
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 131 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 184
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 185 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 9/187 (4%)
Query: 102 RPGTGMLIAVKRLNQEGF-QGHKEWL-TEINYLGQLHHPNLVKLVGYCLEDDHRLL--VY 157
R G ++ K L+ + K+ L +E+N L +L HPN+V+ ++ + L V
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 158 EFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEP---KVIYRDFKASN 214
E+ G + + + + Q L +++ L H V++RD K +N
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 215 ILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGV 274
+ LD N KL DFGLAR + +GT Y +PE + KSDI+S G
Sbjct: 147 VFLDGKQNVKLGDFGLAR--ILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGC 204
Query: 275 VLLEILS 281
+L E+ +
Sbjct: 205 LLYELCA 211
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 155 LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASN 214
+V E++ ++ + + G P++ +++ A L F H + +I+RD K +N
Sbjct: 93 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPAN 146
Query: 215 ILLDSNYNAKLSDFGLARD-GPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFG 273
I++ + K+ DFG+AR +G+ + V+GT Y +PE + A+SD+YS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 274 VVLLEILSGRRAIDKNRPT 292
VL E+L+G + P
Sbjct: 207 CVLYEVLTGEPPFTGDSPV 225
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 17/182 (9%)
Query: 173 GSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR 232
G Y +P++ + + A G+ FL S K I+RD A NILL N K+ DFGLAR
Sbjct: 190 GFYKEPITMEDLISYSFQVARGMEFLSSR--KCIHRDLAARNILLSENNVVKICDFGLAR 247
Query: 233 DGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPT 292
D + APE + + KSD++S+GV+L EI S
Sbjct: 248 DIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS--------LGG 299
Query: 293 GEHNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEV 352
+ V+ + + + R R+ P ++S P+ + + L C +PK RP E+
Sbjct: 300 SPYPGVQMDEDFCSRLREGMRMRAP----EYSTPEIYQ---IMLDCWHRDPKERPRFAEL 352
Query: 353 VK 354
V+
Sbjct: 353 VE 354
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG--HKEWLTEINYLGQL-H 136
LG G FG V V + + T +AVK L +EG +K +TE+ L + H
Sbjct: 35 LGRGAFGKV----VQASAFGIKKSPTCRTVAVKML-KEGATASEYKALMTELKILTHIGH 89
Query: 137 HPNLVKLVGYCLEDDHRLLV-YEFMPRGSMENHLFRRGSYF 176
H N+V L+G C + L+V E+ G++ N+L + F
Sbjct: 90 HLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLF 130
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 155 LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASN 214
+V E++ ++ + + G P++ +++ A L F H + +I+RD K +N
Sbjct: 93 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPAN 146
Query: 215 ILLDSNYNAKLSDFGLARD-GPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFG 273
I++ + K+ DFG+AR +G+ + V+GT Y +PE + A+SD+YS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 274 VVLLEILSGRRAIDKNRPT 292
VL E+L+G + P
Sbjct: 207 CVLYEVLTGEPPFTGDSPV 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 155 LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASN 214
+V E++ ++ + + G P++ +++ A L F H + +I+RD K +N
Sbjct: 93 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPAN 146
Query: 215 ILLDSNYNAKLSDFGLARD-GPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFG 273
I++ + K+ DFG+AR +G+ + V+GT Y +PE + A+SD+YS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 274 VVLLEILSGRRAIDKNRPT 292
VL E+L+G + P
Sbjct: 207 CVLYEVLTGEPPFTGDSPV 225
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + TG A+K L+++ K+ L E ++
Sbjct: 50 LGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E+ P G M +HL R G + +P + +I L
Sbjct: 101 FPFLVKL-EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 155
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D K++DFG A+ V R + GT Y
Sbjct: 156 EYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEY 205
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 155 LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASN 214
+V E++ ++ + + G P++ +++ A L F H + +I+RD K +N
Sbjct: 93 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPAN 146
Query: 215 ILLDSNYNAKLSDFGLARD-GPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFG 273
I++ + K+ DFG+AR +G+ + V+GT Y +PE + A+SD+YS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 274 VVLLEILSGRRAIDKNRP 291
VL E+L+G + P
Sbjct: 207 CVLYEVLTGEPPFTGDSP 224
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE-WLTEIN 130
N+ P +LG G SV + + + + + + E Q +E L E++
Sbjct: 4 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 62
Query: 131 YLGQLH-HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ HPN+++L + LV++ M +G + ++L + + LS KI
Sbjct: 63 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIMR 118
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ LH +++RD K NILLD + N KL+DFG + G+K V GT
Sbjct: 119 ALLEVICALHKL--NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGT 173
Query: 250 YGYAAPEYLATGH------LTAKSDIYSFGVVLLEILSG 282
Y APE + + D++S GV++ +L+G
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 44 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P L KL + +D+ L +V E+ P G M +HL R G + +P + +I L
Sbjct: 95 ILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+++D K++DFG A+ V R +
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 9/187 (4%)
Query: 102 RPGTGMLIAVKRLNQEGF-QGHKEWL-TEINYLGQLHHPNLVKLVGYCLEDDHRLL--VY 157
R G ++ K L+ + K+ L +E+N L +L HPN+V+ ++ + L V
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 158 EFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEP---KVIYRDFKASN 214
E+ G + + + + Q L +++ L H V++RD K +N
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 215 ILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGV 274
+ LD N KL DFGLAR + + +GT Y +PE + KSDI+S G
Sbjct: 147 VFLDGKQNVKLGDFGLAR--ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGC 204
Query: 275 VLLEILS 281
+L E+ +
Sbjct: 205 LLYELCA 211
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE-WLTEIN 130
N+ P +LG G SV + + + + + + E Q +E L E++
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 131 YLGQLH-HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ HPN+++L + LV++ M +G + ++L + + LS KI
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIMR 131
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ LH +++RD K NILLD + N KL+DFG + G+K V GT
Sbjct: 132 ALLEVICALHKL--NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGT 186
Query: 250 YGYAAPEYLATGH------LTAKSDIYSFGVVLLEILSG 282
Y APE + + D++S GV++ +L+G
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 44 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P L KL + +D+ L +V E+ P G M +HL R G + +P + +I L
Sbjct: 95 ILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+++D K++DFG A+ V R +
Sbjct: 154 T----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXL 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 155 LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASN 214
+V E++ ++ + + G P++ +++ A L F H + +I+RD K +N
Sbjct: 110 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPAN 163
Query: 215 ILLDSNYNAKLSDFGLARD-GPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFG 273
I++ + K+ DFG+AR +G+ + V+GT Y +PE + A+SD+YS G
Sbjct: 164 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 223
Query: 274 VVLLEILSGRRAIDKNRPT 292
VL E+L+G + P
Sbjct: 224 CVLYEVLTGEPPFTGDSPV 242
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 111/253 (43%), Gaps = 46/253 (18%)
Query: 44 PQTPRSEGEILQSSNIKNFSYS---DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLAS 100
P+T +EG +L + +K Y ++ AT R LG G FG V H +
Sbjct: 48 PKTEDNEG-VLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEV-------HRMED 95
Query: 101 TRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFM 160
+ TG AVK++ E F+ E+ L P +V L G E + E +
Sbjct: 96 KQ--TGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVREGPWVNIFMELL 148
Query: 161 PRGSMENHLFRRGSYFQPLSWSLRMKIALGAA-NGLAFLHSAEPKVIYRDFKASNILLDS 219
GS+ + +G + R LG A GL +LHS ++++ D KA N+LL S
Sbjct: 149 EGGSLGQLVKEQGCLPED-----RALYYLGQALEGLEYLHSR--RILHGDVKADNVLLSS 201
Query: 220 N-YNAKLSDFG---------LARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDI 269
+ +A L DFG L +D TGD + GT + APE + AK D+
Sbjct: 202 DGSHAALCDFGHAVCLQPDGLGKDLLTGD------YIPGTETHMAPEVVLGRSCDAKVDV 255
Query: 270 YSFGVVLLEILSG 282
+S ++L +L+G
Sbjct: 256 WSSCCMMLHMLNG 268
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 29/261 (11%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT 127
R F+ + + G+G FG+V G TGM +A+K++ Q+ ++E L
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLG---------KEKSTGMSVAIKKVIQDPRFRNRE-LQ 68
Query: 128 EINYLGQLHHPNLVKLVGYCL---EDDHRLL----VYEFMPRG--SMENHLFRRGSYFQP 178
+ L LHHPN+V+L Y E D R + V E++P + +RR P
Sbjct: 69 IMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPP 128
Query: 179 LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILL-DSNYNAKLSDFGLARDGPTG 237
+ + + + LH V +RD K N+L+ +++ KL DFG A+
Sbjct: 129 ILIKVFL---FQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK---KL 182
Query: 238 DKSHVSTRVMGTYGYAAPEYL-ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHN 296
S + + + Y APE + H T DI+S G + E++ G + G+
Sbjct: 183 SPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ-- 240
Query: 297 LVEWAKPYLTSKRRIFRVLDP 317
L E + R + R L+P
Sbjct: 241 LHEIVRVLGCPSREVLRKLNP 261
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKE-WLTEIN 130
N+ P +LG G SV + + + + + + E Q +E L E++
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 131 YLGQLH-HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ HPN+++L + LV++ M +G + ++L + + LS KI
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIMR 131
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
+ LH +++RD K NILLD + N KL+DFG + G+K V GT
Sbjct: 132 ALLEVICALHKL--NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCGT 186
Query: 250 YGYAAPEYLATGH------LTAKSDIYSFGVVLLEILSG 282
Y APE + + D++S GV++ +L+G
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRM 185
L E+ L QL HPN++KL + + + LV E G + + + R F + ++ M
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-FSEVDAAVIM 110
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSHV 242
K L +G +LH + +++RD K N+LL+S K+ DFGL+ G K
Sbjct: 111 KQVL---SGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK- 164
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+GT Y APE L + K D++S GV+L +L G
Sbjct: 165 --ERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 201
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 117/276 (42%), Gaps = 29/276 (10%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
D LGEG F S+ + V + S AVK +++ ++ +T +
Sbjct: 16 DKPLGEGSF-SICRKCVHKKS--------NQAFAVKIISKRMEANTQKEITALKLCEG-- 64
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
HPN+VKL + H LV E + G + + ++ +F S M+ + A +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI-KKKKHFSETEASYIMRKLVSAVS--- 120
Query: 197 FLHSAEPKVIYRDFKASNILL---DSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
H + V++RD K N+L + N K+ DFG AR P D + T T YA
Sbjct: 121 --HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCF-TLHYA 176
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFR 313
APE L D++S GV+L +LSG+ P H+ + ++I +
Sbjct: 177 APELLNQNGYDESCDLWSLGVILYTMLSGQ------VPFQSHDRSLTCTSAVEIMKKI-K 229
Query: 314 VLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDM 349
D EG+ +Q+A L L+V+P R M
Sbjct: 230 KGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKM 265
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINY 131
R + D +G G F +V+KG E +T + ++L + Q KE E
Sbjct: 26 RFLKFDIEIGRGSFKTVYKGLDTE----TTVEVAWCELQDRKLTKSERQRFKE---EAEX 78
Query: 132 LGQLHHPNLVKLVG---------YCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWS 182
L L HPN+V+ C+ +LV E G+++ +L R F+
Sbjct: 79 LKGLQHPNIVRFYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKR----FKVXKIK 129
Query: 183 LRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS-NYNAKLSDFGLARDGPTGDKSH 241
+ GL FLH+ P +I+RD K NI + + K+ D GLA T ++
Sbjct: 130 VLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA----TLKRAS 185
Query: 242 VSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLE 278
+ V+GT + APE + D+Y+FG LE
Sbjct: 186 FAKAVIGTPEFXAPEXYEEKY-DESVDVYAFGXCXLE 221
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ D+GLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKS----QKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGL R +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRM 185
L E+ L QL HPN++KL + + + LV E G + + + R F + ++ M
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-FSEVDAAVIM 127
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSHV 242
K L +G +LH + +++RD K N+LL+S K+ DFGL+ G K
Sbjct: 128 KQVL---SGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK- 181
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+GT Y APE L + K D++S GV+L +L G
Sbjct: 182 --ERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 218
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG +AVK+L++ + K E+ L +
Sbjct: 34 SPVGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 138
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 139 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 192
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRGS--MENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 132
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S++ +R
Sbjct: 133 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 188 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 240
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F+ PQ +
Sbjct: 241 TPTREQIREMNPNYT-EFAFPQIK 263
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG +AVK+L++ + K E+ L +
Sbjct: 24 SPVGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 128
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 129 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 182
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 183 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 109/248 (43%), Gaps = 36/248 (14%)
Query: 44 PQTPRSEGEILQSSNIKNFSYS---DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLAS 100
P+T +EG +L + +K Y ++ AT R LG G FG V H +
Sbjct: 67 PKTEDNEG-VLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEV-------HRMED 114
Query: 101 TRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFM 160
+ TG AVK++ E F+ E+ L P +V L G E + E +
Sbjct: 115 KQ--TGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVREGPWVNIFMELL 167
Query: 161 PRGSMENHLFRRGSYFQPLSWSLRMKIALGAA-NGLAFLHSAEPKVIYRDFKASNILLDS 219
GS+ + +G + R LG A GL +LHS ++++ D KA N+LL S
Sbjct: 168 EGGSLGQLVKEQGCLPED-----RALYYLGQALEGLEYLHSR--RILHGDVKADNVLLSS 220
Query: 220 N-YNAKLSDFG----LARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGV 274
+ +A L DFG L DG G + GT + APE + AK D++S
Sbjct: 221 DGSHAALCDFGHAVCLQPDG-LGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCC 279
Query: 275 VLLEILSG 282
++L +L+G
Sbjct: 280 MMLHMLNG 287
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 107
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SMENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 166
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S++ +R
Sbjct: 167 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 221
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 222 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 274
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 275 TPTREQIREMNPNYT-EFKFPQIK 297
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG +AVK+L++ + K E+ L +
Sbjct: 47 SPVGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 151
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 152 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 205
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 206 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 55 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 101
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SMENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 160
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S++ +R
Sbjct: 161 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 215
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 216 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 268
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 269 TPTREQIREMNPNYT-EFKFPQIK 291
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 63 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 109
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SMENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 168
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S++ +R
Sbjct: 169 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 223
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 224 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 276
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 277 TPTREQIREMNPNYT-EFKFPQIK 299
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 65 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 111
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SMENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 170
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S++ +R
Sbjct: 171 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 225
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 226 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 278
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 279 TPTREQIREMNPNYT-EFKFPQIK 301
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG +AVK+L++ + K E+ L +
Sbjct: 48 SPVGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 153 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 206
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 207 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 106 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 152
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SMENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 211
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S++ +R
Sbjct: 212 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 266
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 267 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 319
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 320 TPTREQIREMNPNYT-EFKFPQIK 342
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEIN 130
F LG G FG V + TG A+K L+++ K+ L E
Sbjct: 43 FERIKTLGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
L ++ P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---V 246
+LHS + +IYRD K N+L+D +++DFG A+ V R +
Sbjct: 153 T----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXL 198
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 31/213 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQLHH 137
+G G +GSV A+ TG +AVK+L++ + K E+ L + H
Sbjct: 40 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 90
Query: 138 PNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGA 191
N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIYQI 144
Query: 192 ANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYG 251
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 145 LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 197
Query: 252 YAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 32 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 78
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRGS--MENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 137
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S++ +R
Sbjct: 138 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 192
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 193 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 245
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 246 TPTREQIREMNPNYT-EFKFPQIK 268
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRGS--MENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 132
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S++ +R
Sbjct: 133 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 188 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 240
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 241 TPTREQIREMNPNYT-EFKFPQIK 263
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 106/246 (43%), Gaps = 54/246 (21%)
Query: 67 LRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL 126
LR A+ +F +VLG+G FG V K ++L S A+K++ + L
Sbjct: 2 LRYAS-DFEEIAVLGQGAFGQVVKA---RNALDSR------YYAIKKIRHTE-EKLSTIL 50
Query: 127 TEINYLGQLHHPNLVKLVGYCLE-------------DDHRLLVYEFMPRGSM------EN 167
+E+ L L+H +V+ LE + E+ G++ EN
Sbjct: 51 SEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN 110
Query: 168 HLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSD 227
+R Y W L +I L+++HS +I+RD K NI +D + N K+ D
Sbjct: 111 LNQQRDEY-----WRLFRQIL----EALSYIHSQ--GIIHRDLKPMNIFIDESRNVKIGD 159
Query: 228 FGLAR------DGPTGDKSHVS------TRVMGTYGYAAPEYL-ATGHLTAKSDIYSFGV 274
FGLA+ D D ++ T +GT Y A E L TGH K D+YS G+
Sbjct: 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGI 219
Query: 275 VLLEIL 280
+ E++
Sbjct: 220 IFFEMI 225
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE-GFQGHKEWLTEINYLGQLHH- 137
+G G +GSV K +G ++AVKR+ + K+ L +++ + +
Sbjct: 30 IGRGAYGSVNK---------MVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDC 80
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P +V+ G + + E M + + + + + KI L L
Sbjct: 81 PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L K+I+RD K SNILLD + N KL DFG++ G D S TR G Y APE
Sbjct: 141 LKE-NLKIIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVD-SIAKTRDAGCRPYMAPER 196
Query: 258 L----ATGHLTAKSDIYSFGVVLLEILSGR 283
+ + +SD++S G+ L E+ +GR
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 44 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 95 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----F 149
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 150 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 199
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 200 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 40 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 86
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SMENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 145
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S++ +R
Sbjct: 146 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 200
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 201 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 253
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 254 TPTREQIREMNPNYT-EFKFPQIK 276
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG +AVK+L++ + K E+ L +
Sbjct: 24 SPVGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + L +I
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQIL- 131
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR +V+TR
Sbjct: 132 ---RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 182
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 183 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 73
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRGS--MENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQ 130
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S++ +R
Sbjct: 131 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 188 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 240
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 241 TPTREQIREMNPNYT-EFKFPQIK 263
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHP 138
LGEG + +V+KG T L+A+K + E +G + E++ L L H
Sbjct: 10 LGEGTYATVYKG---------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
N+V L + LV+E++ + ++ +L G+ + L + GLA+
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFL---FQLLRGLAYC 116
Query: 199 HSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE-Y 257
H KV++RD K N+L++ KL+DFGLAR K++ + V T Y P+
Sbjct: 117 HRQ--KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDIL 172
Query: 258 LATGHLTAKSDIYSFGVVLLEILSGR 283
L + + + D++ G + E+ +GR
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 70 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 121 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 175
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAP 255
+LHS + +IYRD K N+L+D +++DFG A+ + + GT Y AP
Sbjct: 176 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA-----TWTLCGTPEYLAP 228
Query: 256 EYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRP 291
E + + D ++ GV++ E+ +G ++P
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 31/219 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 70 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 121 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----F 175
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 176 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 225
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRP 291
APE + + D ++ GV++ E+ +G ++P
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 107
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SMENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 166
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S + +R
Sbjct: 167 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 221
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 222 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 274
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 275 TPTREQIREMNPNYT-EFKFPQIK 297
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 128 EINYLGQLHHPNLVKLVGYCLED---DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR 184
EI L +L HPN+VKLV L+D DH +V+E + +G + +PLS
Sbjct: 86 EIAILKKLDHPNVVKLVE-VLDDPNEDHLYMVFELVNQGPV-----MEVPTLKPLSEDQA 139
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVST 244
G+ +LH K+I+RD K SN+L+ + + K++DFG++ + D + +
Sbjct: 140 RFYFQDLIKGIEYLHYQ--KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA--LLS 195
Query: 245 RVMGTYGYAAPEYLATGH--LTAKS-DIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWA 301
+GT + APE L+ + K+ D+++ GV L + G+ R H+ ++
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQ 255
Query: 302 ------KPYLTS--KRRIFRVLDPRLEGQFSLPQAQ 329
+P + K I R+LD E + +P+ +
Sbjct: 256 ALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIK 291
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 40/284 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G F +FKG E T +L+ V L++ + + + + +L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKV--LDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV G C+ D +LV EF+ GS++ +L + + L W L + L AA + FL
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-WKLEVAKQLAAA--MHFLE 130
Query: 200 SAEPKVIYRDFKASNILLDSNYN--------AKLSDFGLARDGPTGDKSHVSTRVMGTYG 251
E +I+ + A NILL + KLSD G++ K + R+
Sbjct: 131 --ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI--TVLPKDILQERI----P 182
Query: 252 YAAPEYLAT-GHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ PE + +L +D +SFG L EI SG ++P L S+R+
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSG-----GDKPLSA----------LDSQRK 227
Query: 311 IFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
+ D Q P+A + A+L C+ EP RP +++
Sbjct: 228 LQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIR 268
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG +AVK+L++ + K E+ L +
Sbjct: 24 SPVGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 128
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR V+TR
Sbjct: 129 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR---- 182
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 183 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLAGTPEY 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG +AVK+L++ + K E+ L +
Sbjct: 48 SPVGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DFGLAR V+TR
Sbjct: 153 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR---- 206
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 207 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLXGTPEY 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 36 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 87 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 141
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR--DGPTGDKSHVSTRVMGTYGYA 253
+LHS + +IYRD K N+L+D +++DFG A+ G T + GT Y
Sbjct: 142 EYLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTW-------XLCGTPEYL 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 71 TRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGM-----LIAVKRLNQEGFQGHKEW 125
+ N+ LG+G F V + TG+ +I K+L+ FQ +
Sbjct: 5 SDNYDVKEELGKGAFSVVRR---------CVHKTTGLEFAAKIINTKKLSARDFQKLER- 54
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRM 185
E +L HPN+V+L E+ LV++ + G + + R Y + +
Sbjct: 55 --EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ 112
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSHV 242
+I +A+ HS +++R+ K N+LL S KL+DFGLA + + H
Sbjct: 113 QIL----ESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH- 165
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT GY +PE L + DI++ GV+L +L G
Sbjct: 166 --GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ FGLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 50 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 101 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 155
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 156 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 205
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRGS--MENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLF- 132
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S + +R
Sbjct: 133 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 188 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 240
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F+ PQ +
Sbjct: 241 TPTREQIREMNPNYT-EFAFPQIK 263
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ D GLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 46 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 92
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRGS--MENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 151
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S + +R
Sbjct: 152 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 206
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 207 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 259
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 260 TPTREQIREMNPNYT-EFKFPQIK 282
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 85
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRGS--MENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 144
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S + +R
Sbjct: 145 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 199
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 200 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 252
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 253 TPTREQIREMNPNYT-EFKFPQIK 275
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 35 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 81
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRG--SMENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 140
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S + +R
Sbjct: 141 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 195
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 196 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 248
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 249 TPTREQIREMNPNYT-EFKFPQIK 271
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 71 TRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGM-----LIAVKRLNQEGFQGHKEW 125
+ N+ LG+G F V + TG+ +I K+L+ FQ +
Sbjct: 4 SDNYDVKEELGKGAFSVVRR---------CVHKTTGLEFAAKIINTKKLSARDFQKLER- 53
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRM 185
E +L HPN+V+L E+ LV++ + G + + R Y + +
Sbjct: 54 --EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ 111
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSHV 242
+I +A+ HS +++R+ K N+LL S KL+DFGLA + + H
Sbjct: 112 QIL----ESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH- 164
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT GY +PE L + DI++ GV+L +L G
Sbjct: 165 --GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+GEG +G V+K A G + RL +E + EI+ L +L H N
Sbjct: 10 IGEGTYGVVYK--------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+VKL +LV+E + + + G + S +++ NG+A+ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLL----NGIAYCH 117
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL- 258
+ +V++RD K N+L++ K++DFGLAR G T + T Y AP+ L
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAPDVLM 173
Query: 259 ATGHLTAKSDIYSFGVVLLEILSG 282
+ + DI+S G + E+++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 85
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRGS--MENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 144
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S + +R
Sbjct: 145 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 199
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 200 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 252
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 253 TPTREQIREMNPNYT-EFKFPQIK 275
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ D GLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 71 TRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGM-----LIAVKRLNQEGFQGHKEW 125
+ N+ LG+G F V + TG+ +I K+L+ FQ +
Sbjct: 5 SDNYDVKEELGKGAFSVVRR---------CVHKTTGLEFAAKIINTKKLSARDFQKLER- 54
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRM 185
E +L HPN+V+L E+ LV++ + G + + R Y + +
Sbjct: 55 --EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ 112
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSHV 242
+I +A+ HS +++R+ K N+LL S KL+DFGLA + + H
Sbjct: 113 QIL----ESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH- 165
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT GY +PE L + DI++ GV+L +L G
Sbjct: 166 --GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 67 LRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLI---AVKRLNQEGFQGHK 123
L+ ++ V+G G FG V + H + +L +KR + F +
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEV---QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 124 EWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSW-- 181
+ + N P +V+L +D + +V E+MP G + N + +Y P W
Sbjct: 127 DIMAFAN------SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAK 177
Query: 182 --SLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDK 239
+ + +AL A + + +H RD K N+LLD + + KL+DFG
Sbjct: 178 FYTAEVVLALDAIHSMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 229
Query: 240 SHVSTRVMGTYGYAAPEYLAT----GHLTAKSDIYSFGVVLLEILSG 282
H T V GT Y +PE L + G+ + D +S GV L E+L G
Sbjct: 230 VHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH--KEWLTEIN 130
N+ LG+G F V + TG+ A K +N + ++ E
Sbjct: 30 NYDVKEELGKGAFSVVRR---------CVHKTTGLEFAAKIINTKKLSARDFQKLEREAR 80
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+L HPN+V+L E+ LV++ + G + + R Y + + +I
Sbjct: 81 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL-- 138
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSHVSTRVM 247
+A+ HS +++R+ K N+LL S KL+DFGLA + + H
Sbjct: 139 --ESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFA 191
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT GY +PE L + DI++ GV+L +L G
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+++D +++DFG A+ V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 205 LAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+GEG +G V+K A G + RL +E + EI+ L +L H N
Sbjct: 10 IGEGTYGVVYK--------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+VKL +LV+E + + + G + S +++ NG+A+ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLL----NGIAYCH 117
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL- 258
+ +V++RD K N+L++ K++DFGLAR G T + T Y AP+ L
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 259 ATGHLTAKSDIYSFGVVLLEILSG 282
+ + DI+S G + E+++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 43/240 (17%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL 126
RT R+ +G+G +G V++G W E+ +AVK + + K W
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWF 48
Query: 127 --TEINYLGQLHHPNLVKLVGYCLEDDHR----LLVYEFMPRGSMENHLFRRGSYFQPLS 180
TE+ L H N++ + + H L+ + GS+ ++L L
Sbjct: 49 RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLD 103
Query: 181 WSLRMKIALGAANGLAFLH------SAEPKVIYRDFKASNILLDSNYNAKLSDFGLA--R 232
++I L A+GLA LH +P + +RD K+ NIL+ N ++D GLA
Sbjct: 104 TVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 163
Query: 233 DGPTGDKSHVSTRVMGTYGYAAPEYL-ATGHLTA-----KSDIYSFGVVLLEILSGRRAI 286
T + +GT Y APE L T + + DI++FG+VL E+ RR +
Sbjct: 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 221
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+GEG +G V+K A G + RL +E + EI+ L +L H N
Sbjct: 10 IGEGTYGVVYK--------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+VKL +LV+E + + + G + S +++ NG+A+ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLL----NGIAYCH 117
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYL- 258
+ +V++RD K N+L++ K++DFGLAR G T + T Y AP+ L
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 259 ATGHLTAKSDIYSFGVVLLEILSG 282
+ + DI+S G + E+++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEINYLGQLHH- 137
LGE G G+ + W TG +IAVK++ + G + +K L +++ + + H
Sbjct: 30 LGEMGSGTCGQVWKMRFR------KTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC 83
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
P +V+ G + + + E M G+ L +R P+ + K+ + L +
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYY 139
Query: 198 LHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
L VI+RD K SNILLD KL DFG++ G D R G Y APE
Sbjct: 140 LKEKH-GVIHRDVKPSNILLDERGQIKLCDFGIS--GRLVD-DKAKDRSAGCAAYMAPER 195
Query: 258 LATGHLTA-----KSDIYSFGVVLLEILSGR 283
+ T ++D++S G+ L+E+ +G+
Sbjct: 196 IDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 28 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 74
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRGS--MENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQ 131
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S + +R
Sbjct: 132 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 188
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 189 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 241
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 242 TPTREQIREMNPNYT-EFKFPQIK 264
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 73
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRGS--MENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQ 130
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S + +R
Sbjct: 131 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 188 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 240
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 241 TPTREQIREMNPNYT-EFKFPQIK 263
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 73
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRGS--MENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQ 130
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S + +R
Sbjct: 131 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 188 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 240
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 241 TPTREQIREMNPNYT-EFKFPQIK 263
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 31 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 77
Query: 139 NLVKL------VGYCLEDDHRLLVYEFMPRGS--MENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L G ++ + LV +++P + H R + L M
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 136
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S + +R
Sbjct: 137 --RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 191
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 192 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 244
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 245 TPTREQIREMNPNYT-EFKFPQIK 267
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG+ +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ D GLAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRM 185
L E+ L L HPN++KL + + + LV E G + + + R F + ++ +
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-FNEVDAAVII 142
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSHV 242
K L +G+ +LH + +++RD K N+LL+S K+ DFGL+ ++ +
Sbjct: 143 KQVL---SGVTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVDFGLS--AVFENQKKM 195
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
R +GT Y APE L + K D++S GV+L +L+G
Sbjct: 196 KER-LGTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAG 233
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 40/264 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG V++ + + +G L+A+K++ Q+ ++E + + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKNRE----LQIMRKLDHC 73
Query: 139 NLVKLVGYCLEDDHRL------LVYEFMPRGS--MENHLFRRGSYFQPLSWSLRMKIALG 190
N+V+L + + LV +++P + H R + L M
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQ 130
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDK--SHVSTRVM 247
LA++HS + +RD K N+LLD + KL DFG A+ G+ S + +R
Sbjct: 131 LFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y APE + AT + T+ D++S G VL E+L G+ + +G LVE K
Sbjct: 188 ----YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 240
Query: 306 TSKRRIFRVLDPRLEGQFSLPQAQ 329
T R R ++P +F PQ +
Sbjct: 241 TPTREQIREMNPNYT-EFKFPQIK 263
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 32/223 (14%)
Query: 69 TATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL----NQEGFQGHKE 124
T+ +R + LGEG +G V+K +D T +A+KR+ +EG G
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKA-IDT--------VTNETVAIKRIRLEHEEEGVPGTA- 80
Query: 125 WLTEINYLGQLHHPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
+ E++ L +L H N+++L + +HRL L++E+ EN L + +S +
Sbjct: 81 -IREVSLLKELQHRNIIELKS-VIHHNHRLHLIFEY-----AENDLKKYMDKNPDVSMRV 133
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-----KLSDFGLARDGPTGD 238
NG+ F HS + ++RD K N+LL + + K+ DFGLAR G
Sbjct: 134 IKSFLYQLINGVNFCHSR--RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR--AFGI 189
Query: 239 KSHVSTRVMGTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEIL 280
T + T Y PE L + H + DI+S + E+L
Sbjct: 190 PIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 108/245 (44%), Gaps = 52/245 (21%)
Query: 67 LRTATRNFRPDSVLGEGGFGSVFKG--WVDEHSLA-----------STRPGTGMLIAVKR 113
LR A+ +F +VLG+G FG V K +D A ST ML+A
Sbjct: 2 LRYAS-DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLA--S 58
Query: 114 LN-QEGFQGHKEWLTEINYLGQL----HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENH 168
LN Q + + WL N++ + L + YC ++R L Y+ + EN
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYC---ENRTL-YDLIHS---ENL 111
Query: 169 LFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDF 228
+R Y W L +I L+++HS +I+RD K NI +D + N K+ DF
Sbjct: 112 NQQRDEY-----WRLFRQIL----EALSYIHSQ--GIIHRDLKPMNIFIDESRNVKIGDF 160
Query: 229 GLAR------DGPTGDKSHVS------TRVMGTYGYAAPEYL-ATGHLTAKSDIYSFGVV 275
GLA+ D D ++ T +GT Y A E L TGH K D+YS G++
Sbjct: 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGII 220
Query: 276 LLEIL 280
E++
Sbjct: 221 FFEMI 225
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ ++ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 43/240 (17%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL 126
RT R +G+G +G V++G W E+ +AVK + + K W
Sbjct: 33 RTVARQITLLECVGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWF 77
Query: 127 --TEINYLGQLHHPNLVKLVGYCLEDDHR----LLVYEFMPRGSMENHLFRRGSYFQPLS 180
TE+ L H N++ + + H L+ + GS+ ++L L
Sbjct: 78 RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLD 132
Query: 181 WSLRMKIALGAANGLAFLH------SAEPKVIYRDFKASNILLDSNYNAKLSDFGLA--R 232
++I L A+GLA LH +P + +RD K+ NIL+ N ++D GLA
Sbjct: 133 TVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 192
Query: 233 DGPTGDKSHVSTRVMGTYGYAAPEYL-ATGHLTA-----KSDIYSFGVVLLEILSGRRAI 286
T + +GT Y APE L T + + DI++FG+VL E+ RR +
Sbjct: 193 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 250
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 71 TRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEIN 130
T ++ LG+G F SV + V + + + M+I K+L+ + H++ E
Sbjct: 10 TEEYQLFEELGKGAF-SVVRRCV---KVLAGQEYAAMIINTKKLSA---RDHQKLEREAR 62
Query: 131 YLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
L HPN+V+L E+ H L+++ + G + + R Y+ S ++ L
Sbjct: 63 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-EYYSEADASHCIQQILE 121
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSHVSTRVM 247
A LH + V++R+ K N+LL S KL+DFGLA + ++
Sbjct: 122 AV-----LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FA 174
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT GY +PE L D+++ GV+L +L G
Sbjct: 175 GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 52/290 (17%)
Query: 80 LGEGGFGSV--FKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHH 137
LGEGGF V +G D H A+KR+ Q +E E + +H
Sbjct: 37 LGEGGFSYVDLVEGLHDGH-----------FYALKRILCHEQQDREEAQREADMHRLFNH 85
Query: 138 PNLVKLVGYCLED----DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAAN 193
PN+++LV YCL + L+ F RG++ N + R L+ + + LG
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPT---GDKSHVSTRVMG-- 248
GL +H+ +RD K +NILL L D G G + ++ +
Sbjct: 146 GLEAIHAK--GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 249 --TYGYAAPEYLATGH---LTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKP 303
T Y APE + + ++D++S G VL ++ G D G+ +
Sbjct: 204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA---- 259
Query: 304 YLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCL----SVEPKLRPDM 349
++ Q S+PQ+ + +S Q L +V+P RP +
Sbjct: 260 ---------------VQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHI 294
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 78 SVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQL 135
S +G G +GSV A+ TG +AVK+L++ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 136 HHPNLVKLVGY-----CLED-DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
H N++ L+ LE+ + LV M G+ N++ + Q L+ +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK----CQKLTDDHVQFLIY 132
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGT 249
GL ++HSA+ +I+RD K SN+ ++ + K+ DF LAR +V+TR
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR---- 186
Query: 250 YGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
Y APE + H DI+S G ++ E+L+GR
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 33/236 (13%)
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLF--RRGSYFQPLSWSLR 184
TEI L +L+HP ++K+ + +D+ +V E M G + + + +R + +
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSH 241
M +A + +LH E +I+RD K N+LL S K++DFG ++ G+ S
Sbjct: 129 MLLA------VQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSL 178
Query: 242 VSTRVMGTYGYAAPEYLA---TGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLV 298
+ T + GT Y APE L T D +S GV+L LSG P EH
Sbjct: 179 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY------PPFSEHRTQ 231
Query: 299 EWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
K +TS + F P + + S +KA L + L V+PK R +E ++
Sbjct: 232 VSLKDQITSGKYNFI---PEVWAEVS----EKALDLVKKLLVVDPKARFTTEEALR 280
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 107/245 (43%), Gaps = 30/245 (12%)
Query: 44 PQTPRSEGEILQSSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRP 103
P+T +EG +L + +K Y + R LG G FG V H + +
Sbjct: 46 PETEDNEG-VLLTEKLKPVDY-EYREEVHWMTHQPRLGRGSFGEV-------HRMKDKQ- 95
Query: 104 GTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRG 163
TG AVK++ E F+ + E+ L P +V L G E + E + G
Sbjct: 96 -TGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 149
Query: 164 SMENHLFRRGSYFQPLSWSLRMKIALGAA-NGLAFLHSAEPKVIYRDFKASNILLDSNYN 222
S+ + + G + R LG A GL +LH+ ++++ D KA N+LL S+ +
Sbjct: 150 SLGQLIKQMGCLPED-----RALYYLGQALEGLEYLHTR--RILHGDVKADNVLLSSDGS 202
Query: 223 -AKLSDFG----LARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLL 277
A L DFG L DG G + GT + APE + AK DI+S ++L
Sbjct: 203 RAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 261
Query: 278 EILSG 282
+L+G
Sbjct: 262 HMLNG 266
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 35/212 (16%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAP 255
+LHS + +IYRD K N+L+D +++DFG A+ V R G P
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG--TP 202
Query: 256 EYLATGHLTAKS-----DIYSFGVVLLEILSG 282
EYLA + +K D ++ GV++ E+ +G
Sbjct: 203 EYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 18/185 (9%)
Query: 104 GTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDD--HRLLVYEFMP 161
G +++ V ++ + +++ E L HPN++ ++G C H L+ +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 162 RGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNY 221
GS+ N + G+ F + S +K AL A G+AFLH+ EP + + ++++D +
Sbjct: 93 YGSLYN-VLHEGTNFV-VDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDM 150
Query: 222 NAKLS--DFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAK---SDIYSFGVVL 276
A++S D + P M + APE L +D++SF V+L
Sbjct: 151 TARISMADVKFSFQSPGR---------MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLL 201
Query: 277 LEILS 281
E+++
Sbjct: 202 WELVT 206
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 33/236 (13%)
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLF--RRGSYFQPLSWSLR 184
TEI L +L+HP ++K+ + +D+ +V E M G + + + +R + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSH 241
M +A + +LH E +I+RD K N+LL S K++DFG ++ G+ S
Sbjct: 123 MLLA------VQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSL 172
Query: 242 VSTRVMGTYGYAAPEYLA---TGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLV 298
+ T + GT Y APE L T D +S GV+L LSG P EH
Sbjct: 173 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY------PPFSEHRTQ 225
Query: 299 EWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
K +TS + F P + + S +KA L + L V+PK R +E ++
Sbjct: 226 VSLKDQITSGKYNFI---PEVWAEVS----EKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 37/318 (11%)
Query: 44 PQTPRSEGEILQSSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRP 103
PQT + L S + + + P LG G +G V K
Sbjct: 23 PQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEK---------MRHV 73
Query: 104 GTGMLIAVKRLNQE-GFQGHKEWLTEINY-LGQLHHPNLVKLVGYCLEDDHRLLVYEFMP 161
+G ++AVKR+ Q K L +++ + + P V G + + E M
Sbjct: 74 PSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM- 132
Query: 162 RGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNY 221
S++ + Q + + KIA+ L LHS + VI+RD K SN+L+++
Sbjct: 133 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALG 191
Query: 222 NAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE----YLATGHLTAKSDIYSFGVVLL 277
K+ DFG++ G D S T G Y APE L + KSDI+S G+ ++
Sbjct: 192 QVKMCDFGIS--GYLVD-SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI 248
Query: 278 EILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRRIFRVLDPRLEG-QFSLPQAQKAASLAL 336
E+ R D W P+ K ++ P+L +FS +
Sbjct: 249 ELAILRFPYD-----------SWGTPFQQLK-QVVEEPSPQLPADKFS----AEFVDFTS 292
Query: 337 QCLSVEPKLRPDMDEVVK 354
QCL K RP E+++
Sbjct: 293 QCLKKNSKERPTYPELMQ 310
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
+G+G FG V + T + A+K +N++ E E+ + L
Sbjct: 23 IGKGSFGKV---------CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE 73
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
HP LV L +++ +V + + G + HL ++ +F+ + L L
Sbjct: 74 HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-QQNVHFKEETVKL---FICELVMALD 129
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
+L + ++I+RD K NILLD + + ++DF +A P ++ ++T + GT Y APE
Sbjct: 130 YLQNQ--RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT-MAGTKPYMAPE 184
Query: 257 YLATGHLTAKS---DIYSFGVVLLEILSGRR 284
++ S D +S GV E+L GRR
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 122/284 (42%), Gaps = 40/284 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG+G F +FKG E T +L+ V L++ + + + + +L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKV--LDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
LV G C D +LV EF+ GS++ +L + + L W ++++A A + FL
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAWAMHFLE 130
Query: 200 SAEPKVIYRDFKASNILLDSNYN--------AKLSDFGLARDGPTGDKSHVSTRVMGTYG 251
E +I+ + A NILL + KLSD G++ K + R+
Sbjct: 131 --ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI--TVLPKDILQERI----P 182
Query: 252 YAAPEYLAT-GHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
+ PE + +L +D +SFG L EI SG ++P L S+R+
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSG-----GDKPLSA----------LDSQRK 227
Query: 311 IFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
+ D Q P+A + A+L C+ EP RP +++
Sbjct: 228 LQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIR 268
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 33/236 (13%)
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLF--RRGSYFQPLSWSLR 184
TEI L +L+HP ++K+ + +D+ +V E M G + + + +R + +
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSH 241
M +A + +LH E +I+RD K N+LL S K++DFG ++ G+ S
Sbjct: 122 MLLA------VQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSL 171
Query: 242 VSTRVMGTYGYAAPEYLA---TGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLV 298
+ T + GT Y APE L T D +S GV+L LSG P EH
Sbjct: 172 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY------PPFSEHRTQ 224
Query: 299 EWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
K +TS + F P + + S +KA L + L V+PK R +E ++
Sbjct: 225 VSLKDQITSGKYNFI---PEVWAEVS----EKALDLVKKLLVVDPKARFTTEEALR 273
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 33/236 (13%)
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLF--RRGSYFQPLSWSLR 184
TEI L +L+HP ++K+ + +D+ +V E M G + + + +R + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSH 241
M +A + +LH E +I+RD K N+LL S K++DFG ++ G+ S
Sbjct: 123 MLLA------VQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSL 172
Query: 242 VSTRVMGTYGYAAPEYLA---TGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLV 298
+ T + GT Y APE L T D +S GV+L LSG P EH
Sbjct: 173 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY------PPFSEHRTQ 225
Query: 299 EWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
K +TS + F P + + S +KA L + L V+PK R +E ++
Sbjct: 226 VSLKDQITSGKYNFI---PEVWAEVS----EKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 33/236 (13%)
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLF--RRGSYFQPLSWSLR 184
TEI L +L+HP ++K+ + +D+ +V E M G + + + +R + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSH 241
M +A + +LH E +I+RD K N+LL S K++DFG ++ G+ S
Sbjct: 123 MLLA------VQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSL 172
Query: 242 VSTRVMGTYGYAAPEYLA---TGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLV 298
+ T + GT Y APE L T D +S GV+L LSG P EH
Sbjct: 173 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY------PPFSEHRTQ 225
Query: 299 EWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
K +TS + F P + + S +KA L + L V+PK R +E ++
Sbjct: 226 VSLKDQITSGKYNFI---PEVWAEVS----EKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+GEG G V ++HS G +AVK ++ Q + E+ + H N
Sbjct: 53 IGEGSTGIVCLAR-EKHS--------GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V++ L + ++ EF+ G++ + + + + ++ + LA+LH
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA-----TVCEAVLQALAYLH 158
Query: 200 SAEPKVIYRDFKASNILLDSNYNAKLSDFG----LARDGPTGDKSHVSTRVMGTYGYAAP 255
+ VI+RD K+ +ILL + KLSDFG +++D P ++GT + AP
Sbjct: 159 AQ--GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK------RKXLVGTPYWMAP 210
Query: 256 EYLATGHLTAKSDIYSFGVVLLEILSG 282
E ++ + DI+S G++++E++ G
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 41/240 (17%)
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
TEI L +L+HP ++K+ + +D+ +V E M G + F + + R+K
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----------FDKVVGNKRLK 237
Query: 187 IALGAAN------GLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTG 237
A + +LH E +I+RD K N+LL S K++DFG ++ G
Sbjct: 238 EATCKLYFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILG 293
Query: 238 DKSHVSTRVMGTYGYAAPEYLA---TGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGE 294
+ S + T + GT Y APE L T D +S GV+L LSG P E
Sbjct: 294 ETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY------PPFSE 346
Query: 295 HNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
H K +TS + F P + + S +KA L + L V+PK R +E ++
Sbjct: 347 HRTQVSLKDQITSGKYNFI---PEVWAEVS----EKALDLVKKLLVVDPKARFTTEEALR 399
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 41/240 (17%)
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
TEI L +L+HP ++K+ + +D+ +V E M G + F + + R+K
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----------FDKVVGNKRLK 251
Query: 187 IALGAAN------GLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTG 237
A + +LH E +I+RD K N+LL S K++DFG ++ G
Sbjct: 252 EATCKLYFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILG 307
Query: 238 DKSHVSTRVMGTYGYAAPEYLA---TGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGE 294
+ S + T + GT Y APE L T D +S GV+L LSG P E
Sbjct: 308 ETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY------PPFSE 360
Query: 295 HNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
H K +TS + F P + + S +KA L + L V+PK R +E ++
Sbjct: 361 HRTQVSLKDQITSGKYNFI---PEVWAEVS----EKALDLVKKLLVVDPKARFTTEEALR 413
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 21/229 (9%)
Query: 60 KNFSYSDLRTATR---NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ 116
+N + + T TR +++ LG+G F SV + V + T+ +I K+L+
Sbjct: 16 ENLYFQXMATCTRFTDDYQLFEELGKGAF-SVVRRCVKK---TPTQEYAAKIINTKKLSA 71
Query: 117 EGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYF 176
+ H++ E L HPN+V+L E+ LV++ + G + + R Y+
Sbjct: 72 ---RDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-EYY 127
Query: 177 QPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARD 233
S + L + N H + +++RD K N+LL S KL+DFGLA +
Sbjct: 128 SEADASHCIHQILESVN-----HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIE 182
Query: 234 GPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
++ GT GY +PE L DI++ GV+L +L G
Sbjct: 183 VQGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 107/245 (43%), Gaps = 30/245 (12%)
Query: 44 PQTPRSEGEILQSSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRP 103
P+T +EG +L + +K Y + R +G G FG V H + +
Sbjct: 32 PETEDNEG-VLLTEKLKPVDY-EYREEVHWMTHQPRVGRGSFGEV-------HRMKDKQ- 81
Query: 104 GTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRG 163
TG AVK++ E F+ + E+ L P +V L G E + E + G
Sbjct: 82 -TGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 135
Query: 164 SMENHLFRRGSYFQPLSWSLRMKIALGAA-NGLAFLHSAEPKVIYRDFKASNILLDSNYN 222
S+ + + G + R LG A GL +LH+ ++++ D KA N+LL S+ +
Sbjct: 136 SLGQLIKQMGCLPED-----RALYYLGQALEGLEYLHTR--RILHGDVKADNVLLSSDGS 188
Query: 223 -AKLSDFG----LARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLL 277
A L DFG L DG G + GT + APE + AK DI+S ++L
Sbjct: 189 RAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 247
Query: 278 EILSG 282
+L+G
Sbjct: 248 HMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 107/245 (43%), Gaps = 30/245 (12%)
Query: 44 PQTPRSEGEILQSSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRP 103
P+T +EG +L + +K Y + R +G G FG V H + +
Sbjct: 48 PETEDNEG-VLLTEKLKPVDY-EYREEVHWMTHQPRVGRGSFGEV-------HRMKDKQ- 97
Query: 104 GTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRG 163
TG AVK++ E F+ + E+ L P +V L G E + E + G
Sbjct: 98 -TGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 151
Query: 164 SMENHLFRRGSYFQPLSWSLRMKIALGAA-NGLAFLHSAEPKVIYRDFKASNILLDSNYN 222
S+ + + G + R LG A GL +LH+ ++++ D KA N+LL S+ +
Sbjct: 152 SLGQLIKQMGCLPED-----RALYYLGQALEGLEYLHTR--RILHGDVKADNVLLSSDGS 204
Query: 223 -AKLSDFG----LARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLL 277
A L DFG L DG G + GT + APE + AK DI+S ++L
Sbjct: 205 RAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 263
Query: 278 EILSG 282
+L+G
Sbjct: 264 HMLNG 268
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 90/221 (40%), Gaps = 24/221 (10%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT-- 127
AT + P + +G G +G+V+K + P +G +A+K + G L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYK---------ARDPHSGHFVALKSVRVPNGGGGGGGLPIS 57
Query: 128 ---EINYLGQLH---HPNLVKLVGYCLED--DHRLLVYEFMPRGSMENHLFRRGSYFQPL 179
E+ L +L HPN+V+L+ C D + V + + + L
Sbjct: 58 TVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL 117
Query: 180 SWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDK 239
+ GL FLH+ +++RD K NIL+ S KL+DFGLAR
Sbjct: 118 PAETIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLAR---IYSY 172
Query: 240 SHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEIL 280
T V+ T Y APE L D++S G + E+
Sbjct: 173 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 33/218 (15%)
Query: 89 FKGWVDEHSLASTRPGTGMLIAVKRLNQEGF--------------------QGHKEWLTE 128
F+ V++H G+G V++ Q+G +E E
Sbjct: 20 FQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIERE 79
Query: 129 INYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIA 188
+N L ++ HPN++ L +L+ E + G + + L + S + + +I
Sbjct: 80 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 139
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVST 244
+G+ +LHS ++ + D K NI LLD N KL DFG+A G++
Sbjct: 140 ----DGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---K 190
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 191 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 22/208 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG--HKEWLTEINYLGQLHH 137
LG+G F V + + G A K +N + H++ E L H
Sbjct: 30 LGKGAFSVVRR---------CVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 80
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
PN+V+L E+ H L+++ + G + + R Y+ S ++ L A
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-EYYSEADASHCIQQILEAV----- 134
Query: 198 LHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSHVSTRVMGTYGYAA 254
LH + V++RD K N+LL S KL+DFGLA + ++ GT GY +
Sbjct: 135 LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLS 192
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILSG 282
PE L D+++ GV+L +L G
Sbjct: 193 PEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 21/218 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL----NQEGFQ-GHKE 124
AT + P + +G G +G+V+K + P +G +A+K + +EG
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK---------ARDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 125 WLTEINYLGQLHHPNLVKLVGYCLED--DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWS 182
+ + L HPN+V+L+ C D + V + + + L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 112
Query: 183 LRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHV 242
+ GL FLH+ +++RD K NIL+ S KL+DFGLAR
Sbjct: 113 TIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMA 167
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEIL 280
V+ T Y APE L D++S G + E+
Sbjct: 168 LAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEW---LTEINYLGQLH 136
LG G FG V + +G A+K L+++ K+ L E L ++
Sbjct: 49 LGTGSFGRV---------MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 137 HPNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
P LVKL + +D+ L +V E++ G M +HL R G + +P + +I L
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTR---VMGTYGY 252
+LHS + +IYRD K N+L+D +++DFG A+ V R + GT
Sbjct: 155 EYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEA 204
Query: 253 AAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + + D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 25/220 (11%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL----NQEGFQGHKEW 125
AT + P + +G G +G+V+K + P +G +A+K + +EG
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK---------ARDPHSGHFVALKSVRVPNGEEGLPIST-- 50
Query: 126 LTEINYLGQLH---HPNLVKLVGYCLED--DHRLLVYEFMPRGSMENHLFRRGSYFQPLS 180
+ E+ L +L HPN+V+L+ C D + V + + + L
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP 110
Query: 181 WSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKS 240
+ GL FLH+ +++RD K NIL+ S KL+DFGLAR
Sbjct: 111 AETIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQ 165
Query: 241 HVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEIL 280
V+ T Y APE L D++S G + E+
Sbjct: 166 MALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 43/240 (17%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL 126
RT +G+G +G V++G W E+ +AVK + + K W
Sbjct: 4 RTVAHQITLLECVGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWF 48
Query: 127 --TEINYLGQLHHPNLVKLVGYCLEDDHR----LLVYEFMPRGSMENHLFRRGSYFQPLS 180
TE+ L H N++ + + H L+ + GS+ ++L L
Sbjct: 49 RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLD 103
Query: 181 WSLRMKIALGAANGLAFLH------SAEPKVIYRDFKASNILLDSNYNAKLSDFGLA--R 232
++I L A+GLA LH +P + +RD K+ NIL+ N ++D GLA
Sbjct: 104 TVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 163
Query: 233 DGPTGDKSHVSTRVMGTYGYAAPEYL-ATGHLTA-----KSDIYSFGVVLLEILSGRRAI 286
T + +GT Y APE L T + + DI++FG+VL E+ RR +
Sbjct: 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 221
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLG 133
F +S LG G V++ + GT A+K L + K TEI L
Sbjct: 55 FEVESELGRGATSIVYR---------CKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLL 103
Query: 134 QLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAAN 193
+L HPN++KL LV E + G + + + +G Y + + +I
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL----E 159
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
+A+LH E +++RD K N+L + + K++DFGL++ + + V GT
Sbjct: 160 AVAYLH--ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQVLMKTVCGTP 214
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GY APE L + D++S G++ +L G
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 113/259 (43%), Gaps = 41/259 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G G FG VF+ + E + + K L + F+ E+ + + HP
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIK---------KVLQDKRFKNR-----ELQIMRIVKHP 92
Query: 139 NLVKLVGYCLEDDHRL------LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIA---- 188
N+V L + + + LV E++P ++R ++ L ++ M +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPET-----VYRASRHYAKLKQTMPMLLIKLYM 147
Query: 189 LGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDKSHVSTRVM 247
LA++HS + +RD K N+LLD KL DFG A+ G+ + + +
Sbjct: 148 YQLLRSLAYIHSI--GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN--VSXIC 203
Query: 248 GTYGYAAPEYL--ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYL 305
Y Y APE + AT + T DI+S G V+ E++ G+ +G LVE K
Sbjct: 204 SRY-YRAPELIFGATNY-TTNIDIWSTGCVMAELMQGQPLFPGE--SGIDQLVEIIKVLG 259
Query: 306 TSKRRIFRVLDPR-LEGQF 323
T R + ++P +E +F
Sbjct: 260 TPSREQIKTMNPNYMEHKF 278
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 21/218 (9%)
Query: 70 ATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL----NQEGFQ-GHKE 124
AT + P + +G G +G+V+K + P +G +A+K + +EG
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK---------ARDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 125 WLTEINYLGQLHHPNLVKLVGYCLED--DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWS 182
+ + L HPN+V+L+ C D + V + + + L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 112
Query: 183 LRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHV 242
+ GL FLH+ +++RD K NIL+ S KL+DFGLAR
Sbjct: 113 TIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMA 167
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEIL 280
V+ T Y APE L D++S G + E+
Sbjct: 168 LFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L Q+ HPN++ L +L+ E + G + + L ++ S + + S +I
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
+G+ +LH+ K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 125 L----DGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK-- 176
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 177 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEI 129
+ RP +G G +GSV + A R +AVK+L++ + + E+
Sbjct: 23 QGLRP---VGSGAYGSVCSAYD-----ARLRQK----VAVKKLSRPFQSLIHARRTYREL 70
Query: 130 NYLGQLHHPNLVKLV-----GYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
L L H N++ L+ +ED + LV M G+ N++ + Q LS
Sbjct: 71 RLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVK----CQALSDEH 124
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+ GL ++HSA +I+RD K SN+ ++ + ++ DFGLAR +V+
Sbjct: 125 VQFLVYQLLRGLKYIHSA--GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVA 182
Query: 244 TRVMGTYGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
TR Y APE + H DI+S G ++ E+L G+
Sbjct: 183 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT------EINYLG 133
LG G F V K + GTG A K + + + ++ E+N L
Sbjct: 13 LGSGQFAIVRK---------CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 134 QLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAAN 193
++ HPN++ L +L+ E + G + + L + S + + +I +
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL----D 119
Query: 194 GLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVSTRVMGT 249
G+ +LHS ++ + D K NI LLD N KL DFG+A G++ + GT
Sbjct: 120 GVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 174
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ APE + L ++D++S GV+ +LSG
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT------EINYLG 133
LG G F V K + GTG A K + + + ++ E+N L
Sbjct: 20 LGSGQFAIVRK---------CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 70
Query: 134 QLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAAN 193
++ HPN++ L +L+ E + G + + L + S + + +I +
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL----D 126
Query: 194 GLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVSTRVMGT 249
G+ +LHS ++ + D K NI LLD N KL DFG+A G++ + GT
Sbjct: 127 GVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 181
Query: 250 YGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ APE + L ++D++S GV+ +LSG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 40/230 (17%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH--- 122
++R R+ +P +G G +G+V ++ TG +A+K+L + FQ
Sbjct: 22 EVRAVYRDLQP---VGSGAYGAV---------CSAVDGRTGAKVAIKKLYRP-FQSELFA 68
Query: 123 KEWLTEINYLGQLHHPNLVKLVGYCLEDD------HRLLVYEFM--PRGSMENHLFRRGS 174
K E+ L + H N++ L+ D+ LV FM G + H
Sbjct: 69 KRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED 128
Query: 175 YFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDG 234
Q L + + GL ++H+A +I+RD K N+ ++ + K+ DFGLAR
Sbjct: 129 RIQFLVYQM--------LKGLRYIHAA--GIIHRDLKPGNLAVNEDCELKILDFGLARQA 178
Query: 235 PTGDKSHVSTRVMGTYGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
+ V TR Y APE + T DI+S G ++ E+++G+
Sbjct: 179 DSEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 48/221 (21%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH---KEWLTEINYLGQLH 136
+G G +GSV +D+ S G +A+K+L++ FQ K E+ L +
Sbjct: 32 VGSGAYGSVCSA-IDKRS--------GEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHMQ 81
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI--------- 187
H N++ L+ F P S+ N F P + KI
Sbjct: 82 HENVIGLLDV------------FTPASSLRN--FYDFYLVMPFMQTDLQKIMGLKFSEEK 127
Query: 188 ----ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
GL ++HSA V++RD K N+ ++ + K+ DFGLAR +V
Sbjct: 128 IQYLVYQMLKGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV 185
Query: 244 TRVMGTYGYAAPEY-LATGHLTAKSDIYSFGVVLLEILSGR 283
TR Y APE L+ H DI+S G ++ E+L+G+
Sbjct: 186 TR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V + TG + K +N EI+ + QLHHP
Sbjct: 59 LGSGAFGVVHR---------CVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 140 LVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFL 198
L+ L ED + + L+ EF+ G + + R + +S + + A GL +
Sbjct: 110 LINLHD-AFEDKYEMVLILEFLSGGELFD---RIAAEDYKMSEAEVINYMRQACEGLKHM 165
Query: 199 HSAEPKVIYRDFKASNILLDSN--YNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
H E +++ D K NI+ ++ + K+ DFGLA + V+T T +AAPE
Sbjct: 166 H--EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPE 220
Query: 257 YLATGHLTAKSDIYSFGVVLLEILSG 282
+ + +D+++ GV+ +LSG
Sbjct: 221 IVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEI 129
+ RP +G G +GSV + A R +AVK+L++ + + E+
Sbjct: 31 QGLRP---VGSGAYGSVCSAYD-----ARLRQK----VAVKKLSRPFQSLIHARRTYREL 78
Query: 130 NYLGQLHHPNLVKLV-----GYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
L L H N++ L+ +ED + LV M G+ N++ + Q LS
Sbjct: 79 RLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVK----CQALSDEH 132
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+ GL ++HSA +I+RD K SN+ ++ + ++ DFGLAR +V+
Sbjct: 133 VQFLVYQLLRGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVA 190
Query: 244 TRVMGTYGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
TR Y APE + H DI+S G ++ E+L G+
Sbjct: 191 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 48/221 (21%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH---KEWLTEINYLGQLH 136
+G G +GSV +D+ S G +A+K+L++ FQ K E+ L +
Sbjct: 50 VGSGAYGSVCSA-IDKRS--------GEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHMQ 99
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI--------- 187
H N++ L+ F P S+ N F P + KI
Sbjct: 100 HENVIGLLDV------------FTPASSLRN--FYDFYLVMPFMQTDLQKIMGMEFSEEK 145
Query: 188 ----ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
GL ++HSA V++RD K N+ ++ + K+ DFGLAR +V
Sbjct: 146 IQYLVYQMLKGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV 203
Query: 244 TRVMGTYGYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGR 283
TR Y APE L+ H DI+S G ++ E+L+G+
Sbjct: 204 TR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L ++ HPN++ L +L+ E + G + + L + S + + +I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
NG+ +LHS + + + D K NI LLD N K+ DFGLA G++
Sbjct: 124 L----NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEI 129
+ RP +G G +GSV + A R +AVK+L++ + + E+
Sbjct: 31 QGLRP---VGSGAYGSVCSAYD-----ARLRQK----VAVKKLSRPFQSLIHARRTYREL 78
Query: 130 NYLGQLHHPNLVKLV-----GYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSL 183
L L H N++ L+ +ED + LV M G+ N++ + Q LS
Sbjct: 79 RLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKS----QALSDEH 132
Query: 184 RMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVS 243
+ GL ++HSA +I+RD K SN+ ++ + ++ DFGLAR +V+
Sbjct: 133 VQFLVYQLLRGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVA 190
Query: 244 TRVMGTYGYAAPEYLATG-HLTAKSDIYSFGVVLLEILSGR 283
TR Y APE + H DI+S G ++ E+L G+
Sbjct: 191 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 27/215 (12%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-----KEWLTEINYLG 133
V+G+G F SV + ++ TG AVK ++ F ++ E +
Sbjct: 31 VIGKGAF-SVVRRCINRE--------TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 134 QLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR---GSYFQPLSWSLRMKIALG 190
L HP++V+L+ D +V+EFM + + +R G + S M+ L
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA---KLSDFGLARDGPTGDKSHVSTRVM 247
A L + H + +I+RD K N+LL S N+ KL DFG+A G+ V+ +
Sbjct: 142 A---LRYCH--DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGGRV 194
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT + APE + D++ GV+L +LSG
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 50/244 (20%)
Query: 67 LRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWL 126
LR A+ +F +VLG+G FG V K ++L S A+K++ + L
Sbjct: 2 LRYAS-DFEEIAVLGQGAFGQVVKA---RNALDSR------YYAIKKIRHTE-EKLSTIL 50
Query: 127 TEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLS------ 180
+E+ L L+H +V+ LE + + + + S LF + Y + +
Sbjct: 51 SEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKST---LFIQXEYCENRTLYDLIH 107
Query: 181 -----------WSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFG 229
W L +I L+++HS +I+R+ K NI +D + N K+ DFG
Sbjct: 108 SENLNQQRDEYWRLFRQIL----EALSYIHSQ--GIIHRNLKPXNIFIDESRNVKIGDFG 161
Query: 230 LAR------DGPTGDKSHVS------TRVMGTYGYAAPEYL-ATGHLTAKSDIYSFGVVL 276
LA+ D D ++ T +GT Y A E L TGH K D YS G++
Sbjct: 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIF 221
Query: 277 LEIL 280
E +
Sbjct: 222 FEXI 225
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 129/320 (40%), Gaps = 59/320 (18%)
Query: 74 FRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLG 133
R VL EGGF V++ + G+G A+KRL + ++ + E+ ++
Sbjct: 30 LRVRRVLAEGGFAFVYE---------AQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMK 80
Query: 134 QLH-HPNLVKL-----VGYCLED--DHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRM 185
+L HPN+V+ +G D L+ + +G + L + S PLS +
Sbjct: 81 KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESR-GPLSCDTVL 139
Query: 186 KIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR--------DGPTG 237
KI + +H +P +I+RD K N+LL + KL DFG A
Sbjct: 140 KIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQ 199
Query: 238 DKSHVSTRVM--GTYGYAAPEYL---ATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPT 292
++ V + T Y PE + + + K DI++ G +L +L R
Sbjct: 200 RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY-LLCFR--------- 249
Query: 293 GEHNLVEWAKPYLTSKRRIFRVLDPRLEGQFSLP----QAQKAASLALQCLSVEPKLRPD 348
+H + AK R+++ G++S+P Q SL L V P+ R
Sbjct: 250 -QHPFEDGAK---------LRIVN----GKYSIPPHDTQYTVFHSLIRAMLQVNPEERLS 295
Query: 349 MDEVVKXXXXXXXXRNMHKR 368
+ EVV RN++ +
Sbjct: 296 IAEVVHQLQEIAAARNVNPK 315
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L ++ HPN++ L +L+ E + G + + L + S + + +I
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
NG+ +LHS + + + D K NI LLD N K+ DFGLA G++
Sbjct: 123 L----NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 174
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 175 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 38/223 (17%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEINYLGQLHH 137
+LG+G +VF+G TG L A+K N F + + E L +L+H
Sbjct: 16 ILGQGATANVFRG---------RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66
Query: 138 PNLVKLVGYCLEDD----HRLLVYEFMPRGSMENHLFR-RGSYFQPLS-WSLRMKIALGA 191
N+VKL + +E++ H++L+ EF P GS+ L +Y P S + + ++ +G
Sbjct: 67 KNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 192 ANGLAFLHSAEPKVIYRDFKASNILL----DSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
N H E +++R+ K NI+ D KL+DFG AR+ D+ VS +
Sbjct: 125 MN-----HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE-LEDDEQFVS--LY 176
Query: 248 GTYGYAAPEYLATGHLT--------AKSDIYSFGVVLLEILSG 282
GT Y P+ L A D++S GV +G
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 34/222 (15%)
Query: 86 GSVFKGW-VDEHSLASTRPGTGMLIAVKRLNQE--GFQGHKEWLT--------------- 127
G+VF+ VD++ G+G VK+ ++ G Q +++
Sbjct: 1 GTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 128 ---EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR 184
E++ L ++ HPN++ L +L+ E + G + + L + S + +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKS 240
+I NG+ +LHS + + + D K NI LLD N K+ DFGLA G++
Sbjct: 121 KQIL----NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 241 HVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 175 K---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L ++ HPN++ L +L+ E + G + + L + S + + +I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
NG+ +LHS + + + D K NI LLD N K+ DFGLA G++
Sbjct: 124 L----NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L ++ HPN++ L +L+ E + G + + L + S + + +I
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
NG+ +LHS + + + D K NI LLD N K+ DFGLA G++
Sbjct: 123 L----NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 174
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 175 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L ++ HPN++ L +L+ E + G + + L + S + + +I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
NG+ +LHS + + + D K NI LLD N K+ DFGLA G++
Sbjct: 124 L----NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L ++ HPN++ L +L+ E + G + + L + S + + +I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
NG+ +LHS + + + D K NI LLD N K+ DFGLA G++
Sbjct: 124 L----NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L ++ HPN++ L +L+ E + G + + L + S + + +I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
NG+ +LHS + + + D K NI LLD N K+ DFGLA G++
Sbjct: 124 L----NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L ++ HPN++ L +L+ E + G + + L + S + + +I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
NG+ +LHS + + + D K NI LLD N K+ DFGLA G++
Sbjct: 124 L----NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L ++ HPN++ L +L+ E + G + + L + S + + +I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
NG+ +LHS + + + D K NI LLD N K+ DFGLA G++
Sbjct: 124 L----NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L ++ HPN++ L +L+ E + G + + L + S + + +I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
NG+ +LHS + + + D K NI LLD N K+ DFGLA G++
Sbjct: 124 L----NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 22/208 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG--HKEWLTEINYLGQLHH 137
LG+G F V + + TG A K +N + H++ E L H
Sbjct: 12 LGKGAFSVVRR---------CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
PN+V+L E+ LV++ + G + + R Y+ S ++ L + N
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-EYYSEADASHCIQQILESVN---- 117
Query: 198 LHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSHVSTRVMGTYGYAA 254
H +++RD K N+LL S KL+DFGLA + GD+ GT GY +
Sbjct: 118 -HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQ-QAWFGFAGTPGYLS 174
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILSG 282
PE L D+++ GV+L +L G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 22/208 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG--HKEWLTEINYLGQLHH 137
+G+G F V + + TG A K +N + H++ E L H
Sbjct: 12 IGKGAFSVVRR---------CVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
N+V+L E+ LV++ + G + + R Y+ S ++ L A
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-EYYSEADASHCIQQILEAV----- 116
Query: 198 LHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSHVSTRVMGTYGYAA 254
LH + V++RD K N+LL S KL+DFGLA + GD+ GT GY +
Sbjct: 117 LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGDQQ-AWFGFAGTPGYLS 174
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILSG 282
PE L DI++ GV+L +L G
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L ++ HPN++ L +L+ E + G + + L + S + + +I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
NG+ +LHS + + + D K NI LLD N K+ DFGLA G++
Sbjct: 124 L----NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L ++ HPN++ L +L+ E + G + + L + S + + +I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
NG+ +LHS + + + D K NI LLD N K+ DFGLA G++
Sbjct: 124 L----NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 15/134 (11%)
Query: 151 DHRLLVYEFMPRGSM---ENHLF---RRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPK 204
D ++YE+M S+ + + F + + F P+ + I N +++H+ E
Sbjct: 116 DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ--VIKCIIKSVLNSFSYIHN-EKN 172
Query: 205 VIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLA--TGH 262
+ +RD K SNIL+D N KLSDFG + DK +R GTY + PE+ + + +
Sbjct: 173 ICHRDVKPSNILMDKNGRVKLSDFGESE--YMVDKKIKGSR--GTYEFMPPEFFSNESSY 228
Query: 263 LTAKSDIYSFGVVL 276
AK DI+S G+ L
Sbjct: 229 NGAKVDIWSLGICL 242
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
+ A G+ FL S K I+RD A NILL K+ DFGLARD
Sbjct: 204 SFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 262 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 21/206 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V + T TG A K + + EI + L HP
Sbjct: 59 LGTGAFGVVHR---------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR-GSYFQPLSWSLRMKIALGAANGLAFL 198
LV L +D+ +++YEFM G LF + +S ++ GL +
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 199 HSAEPKVIYRDFKASNILLDSNYNA--KLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
H E ++ D K NI+ + + KL DFGL V+T GT +AAPE
Sbjct: 166 H--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE 220
Query: 257 YLATGHLTAKSDIYSFGVVLLEILSG 282
+ +D++S GV+ +LSG
Sbjct: 221 VAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 202 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
A G+ FL S K I+RD A NILL K+ DFGLARD
Sbjct: 209 VAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + DI+S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + DI+S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
A G+ FL A K I+RD A NILL K+ DFGLARD
Sbjct: 200 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
+ APE + T +SD++SFGV+L EI S
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 22/208 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQG--HKEWLTEINYLGQLHH 137
LG+G F V + + TG A K +N + H++ E L H
Sbjct: 12 LGKGAFSVVRR---------CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 138 PNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAF 197
PN+V+L E+ LV++ + G + + R Y+ S ++ L + N
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-EYYSEADASHCIQQILESVN---- 117
Query: 198 LHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGPTGDKSHVSTRVMGTYGYAA 254
H +++RD K N+LL S KL+DFGLA + GD+ GT GY +
Sbjct: 118 -HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQ-QAWFGFAGTPGYLS 174
Query: 255 PEYLATGHLTAKSDIYSFGVVLLEILSG 282
PE L D+++ GV+L +L G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 101/237 (42%), Gaps = 42/237 (17%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL----NQEGFQGHKEWLTEINYLGQL 135
+G+G FG VFK + TG +A+K++ +EGF L EI L L
Sbjct: 26 IGQGTFGEVFK---------ARHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 74
Query: 136 HHPNLVKLVGYCLED--------DHRLLVYEFMPR---GSMENHLFRRGSYFQPLSWSLR 184
H N+V L+ C LV++F G + N L + + S
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-------FTLSEI 127
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH--- 241
++ NGL ++H K+++RD KA+N+L+ + KL+DFGLAR S
Sbjct: 128 KRVMQMLLNGLYYIHRN--KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 242 VSTRVMGTYGYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNL 297
RV+ T Y PE L D++ G ++ E+ + + N T +H L
Sbjct: 186 YXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN--TEQHQL 239
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L ++ HPN++ L +L+ E + G + + L + S + + +I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
NG+ +LHS + + + D K NI LLD N K+ DFGLA G++
Sbjct: 124 L----NGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 21/206 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
LG G FG V + T TG A K + + EI + L HP
Sbjct: 165 LGTGAFGVVHR---------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR-GSYFQPLSWSLRMKIALGAANGLAFL 198
LV L +D+ +++YEFM G LF + +S ++ GL +
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGG----ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 199 HSAEPKVIYRDFKASNILLDS--NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPE 256
H E ++ D K NI+ + + KL DFGL V+T GT +AAPE
Sbjct: 272 H--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE 326
Query: 257 YLATGHLTAKSDIYSFGVVLLEILSG 282
+ +D++S GV+ +LSG
Sbjct: 327 VAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTACT---NFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + A DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 101/237 (42%), Gaps = 42/237 (17%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL----NQEGFQGHKEWLTEINYLGQL 135
+G+G FG VFK + TG +A+K++ +EGF L EI L L
Sbjct: 26 IGQGTFGEVFK---------ARHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 74
Query: 136 HHPNLVKLVGYCLEDDH--------RLLVYEFMPR---GSMENHLFRRGSYFQPLSWSLR 184
H N+V L+ C LV++F G + N L + + S
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK-------FTLSEI 127
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH--- 241
++ NGL ++H K+++RD KA+N+L+ + KL+DFGLAR S
Sbjct: 128 KRVMQMLLNGLYYIHRN--KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 242 VSTRVMGTYGYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNL 297
RV+ T Y PE L D++ G ++ E+ + + N T +H L
Sbjct: 186 YXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN--TEQHQL 239
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 101/237 (42%), Gaps = 42/237 (17%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL----NQEGFQGHKEWLTEINYLGQL 135
+G+G FG VFK + TG +A+K++ +EGF L EI L L
Sbjct: 26 IGQGTFGEVFK---------ARHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 74
Query: 136 HHPNLVKLVGYCLED--------DHRLLVYEFMPR---GSMENHLFRRGSYFQPLSWSLR 184
H N+V L+ C LV++F G + N L + + S
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-------FTLSEI 127
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH--- 241
++ NGL ++H K+++RD KA+N+L+ + KL+DFGLAR S
Sbjct: 128 KRVMQMLLNGLYYIHRN--KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 242 VSTRVMGTYGYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNL 297
RV+ T Y PE L D++ G ++ E+ + + N T +H L
Sbjct: 186 YXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN--TEQHQL 239
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 101/237 (42%), Gaps = 42/237 (17%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRL----NQEGFQGHKEWLTEINYLGQL 135
+G+G FG VFK + TG +A+K++ +EGF L EI L L
Sbjct: 25 IGQGTFGEVFK---------ARHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 73
Query: 136 HHPNLVKLVGYCLED--------DHRLLVYEFMPR---GSMENHLFRRGSYFQPLSWSLR 184
H N+V L+ C LV++F G + N L + + S
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-------FTLSEI 126
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSH--- 241
++ NGL ++H K+++RD KA+N+L+ + KL+DFGLAR S
Sbjct: 127 KRVMQMLLNGLYYIHRN--KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184
Query: 242 VSTRVMGTYGYAAPE-YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNL 297
RV+ T Y PE L D++ G ++ E+ + + N T +H L
Sbjct: 185 YXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN--TEQHQL 238
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 139 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + DI+S G ++ E++ G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 42/276 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
VLG+G +G V+ G L++ + IA+K + + + + EI L H
Sbjct: 29 VLGKGTYGIVYAG----RDLSNQ-----VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 79
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPL-----SWSLRMKIALGAAN 193
N+V+ +G E+ + E +P GS+ + L R S + PL + K L
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSL-SALLR--SKWGPLKDNEQTIGFYTKQIL---E 133
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
GL +LH + ++++RD K N+L+++ K+SDFG ++ + + GT Y
Sbjct: 134 GLKYLH--DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQY 189
Query: 253 AAPEYLATG--HLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
APE + G +DI+S G ++E+ TG+ E +P +
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEM-----------ATGKPPFYELGEP----QAA 234
Query: 311 IFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLR 346
+F+V ++ + + +A + L+C +P R
Sbjct: 235 MFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 38/223 (17%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF-QGHKEWLTEINYLGQLHH 137
+LG+G +VF+G TG L A+K N F + + E L +L+H
Sbjct: 16 ILGQGATANVFRG---------RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66
Query: 138 PNLVKLVGYCLEDD----HRLLVYEFMPRGSMENHLFR-RGSYFQPLS-WSLRMKIALGA 191
N+VKL + +E++ H++L+ EF P GS+ L +Y P S + + ++ +G
Sbjct: 67 KNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 192 ANGLAFLHSAEPKVIYRDFKASNILL----DSNYNAKLSDFGLARDGPTGDKSHVSTRVM 247
N H E +++R+ K NI+ D KL+DFG AR+ D+ V +
Sbjct: 125 MN-----HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE-LEDDEQFVX--LY 176
Query: 248 GTYGYAAPEYLATGHLT--------AKSDIYSFGVVLLEILSG 282
GT Y P+ L A D++S GV +G
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 42/273 (15%)
Query: 56 SSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLN 115
S NI F DL + + +P LG GG G VF ++ +A+K++
Sbjct: 1 SMNIHGF---DLGSRYMDLKP---LGCGGNGLVF---------SAVDNDCDKRVAIKKIV 45
Query: 116 QEGFQGHKEWLTEINYLGQLHHPNLVKL--------------VGYCLEDDHRLLVYEFMP 161
Q K L EI + +L H N+VK+ VG E + +V E+M
Sbjct: 46 LTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM- 104
Query: 162 RGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS-N 220
+ N + +G + + ++ GL ++HSA V++RD K +N+ +++ +
Sbjct: 105 ETDLAN-VLEQGPLLEEHARLFMYQL----LRGLKYIHSA--NVLHRDLKPANLFINTED 157
Query: 221 YNAKLSDFGLAR--DGPTGDKSHVSTRVMGTYGYAAPEYLAT-GHLTAKSDIYSFGVVLL 277
K+ DFGLAR D K H+S ++ T Y +P L + + T D+++ G +
Sbjct: 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFA 216
Query: 278 EILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
E+L+G+ + L+ + P + + R
Sbjct: 217 EMLTGKTLFAGAHELEQMQLILESIPVVHEEDR 249
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 120/299 (40%), Gaps = 45/299 (15%)
Query: 67 LRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE-GFQGHKEW 125
+ + P LG G +G V K +G ++AVKR+ Q K
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEK---------MRHVPSGQIMAVKRIRATVNSQEQKRL 52
Query: 126 LTEINY-LGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR 184
L +++ + + P V G + + E M S++ + Q + +
Sbjct: 53 LMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDIL 111
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGL--------ARDGPT 236
KIA+ L LHS + VI+RD K SN+L+++ K+ DFG+ A+D
Sbjct: 112 GKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 237 GDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHN 296
G K +++ + PE G+ + KSDI+S G+ ++E+ R D
Sbjct: 171 GCKPYMAPERIN------PELNQKGY-SVKSDIWSLGITMIELAILRFPYD--------- 214
Query: 297 LVEWAKPYLTSKRRIFRVLDPRLEG-QFSLPQAQKAASLALQCLSVEPKLRPDMDEVVK 354
W P+ +++ P+L +FS + QCL K RP E+++
Sbjct: 215 --SWGTPF-QQLKQVVEEPSPQLPADKFS----AEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRG-SMENHLFRRGSYFQPLSWSLRMK 186
E G+L P++V + + E D +L V + G + L R+G P + ++ +
Sbjct: 84 EARTAGRLQEPHVVPIHDFG-EIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQ 142
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
I G A + +RD K NIL+ ++ A L DFG+A T +K
Sbjct: 143 I------GSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIA-SATTDEKLTQLGNT 195
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+GT Y APE + H T ++DIY+ VL E L+G
Sbjct: 196 VGTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 42/276 (15%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
VLG+G +G V+ G L++ + IA+K + + + + EI L H
Sbjct: 15 VLGKGTYGIVYAG----RDLSNQ-----VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 65
Query: 139 NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPL-----SWSLRMKIALGAAN 193
N+V+ +G E+ + E +P GS+ + L R S + PL + K L
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSL-SALLR--SKWGPLKDNEQTIGFYTKQIL---E 119
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDKSHVSTRVMGTYGY 252
GL +LH + ++++RD K N+L+++ K+SDFG ++ + + GT Y
Sbjct: 120 GLKYLH--DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQY 175
Query: 253 AAPEYLATG--HLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLTSKRR 310
APE + G +DI+S G ++E+ TG+ E +P +
Sbjct: 176 MAPEIIDKGPRGYGKAADIWSLGCTIIEM-----------ATGKPPFYELGEP----QAA 220
Query: 311 IFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLR 346
+F+V ++ + + +A + L+C +P R
Sbjct: 221 MFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 130/315 (41%), Gaps = 62/315 (19%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE---GFQGHKEWLT-- 127
+R +LG+GGFG+VF G H L + +A+K + + G+ + +T
Sbjct: 32 EYRLGPLLGKGGFGTVFAG----HRLTDR-----LQVAIKVIPRNRVLGWSPLSDSVTCP 82
Query: 128 -EINYLGQL----HHPNLVKLVGYCLEDDHRLLVYEF-MPRGSMENHLFRRGSYFQPLSW 181
E+ L ++ HP +++L+ + + +LV E +P + +++ +G + S
Sbjct: 83 LEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSR 142
Query: 182 SLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYN-AKLSDFG---LARDGPTG 237
++ A H V++RD K NIL+D AKL DFG L D P
Sbjct: 143 CFFGQVV------AAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYT 196
Query: 238 DKSHVSTRVMGTYGYAAPEYLATGHLTA-KSDIYSFGVVLLEILSGRRAIDKNRPTGEHN 296
D GT Y+ PE+++ A + ++S G++L +++ G ++++ E
Sbjct: 197 DFD-------GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAE 249
Query: 297 LVEWAKPYLTSKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVVKXX 356
L F + +L +CL+ +P RP ++E++
Sbjct: 250 L------------------------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDP 285
Query: 357 XXXXXXRNMHKRPQK 371
++ P K
Sbjct: 286 WMQTPAEDVPLNPSK 300
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 45/241 (18%)
Query: 68 RTATRNFRPDSVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEW 125
RT + + +G+G +G V+ G W E +AVK E +E
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEK------------VAVKVFFTTEEASWFRE- 79
Query: 126 LTEINYLGQLHHPNLVKLVGYCLEDD----HRLLVYEFMPRGSMENHLFRRGSYFQPLSW 181
TEI + H N++ + ++ L+ ++ GS+ ++L + + S
Sbjct: 80 -TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKS- 135
Query: 182 SLRMKIALGAANGLAFLHS------AEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGP 235
+K+A + +GL LH+ +P + +RD K+ NIL+ N ++D GLA
Sbjct: 136 --MLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF- 192
Query: 236 TGDKSHV----STRVMGTYGYAAPEYLATG----HLTA--KSDIYSFGVVLLEILSGRRA 285
D + V +TRV GT Y PE L H + +D+YSFG++L E+ RR
Sbjct: 193 ISDTNEVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRC 249
Query: 286 I 286
+
Sbjct: 250 V 250
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + + T Y
Sbjct: 140 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYYR 194
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + DI+S G ++ E++ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 24/188 (12%)
Query: 104 GTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDD--HRLLVYEFMP 161
G +++ V ++ + +++ E L HPN++ ++G C H L+ + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 162 RGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNY 221
GS+ N + G+ F + S +K AL A G AFLH+ EP + + ++ +D +
Sbjct: 93 YGSLYN-VLHEGTNFV-VDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDX 150
Query: 222 NAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAK--------SDIYSFG 273
A++S + V AP ++A L K +D +SF
Sbjct: 151 TARIS------------XADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFA 198
Query: 274 VVLLEILS 281
V+L E+++
Sbjct: 199 VLLWELVT 206
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T + + T + T Y
Sbjct: 136 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYR 190
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
APE + DI+S G ++ E++ G
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L Q+ H N++ L +L+ E + G + + L ++ S + + S +I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
+G+ +LH+ K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 125 L----DGVNYLHTK--KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L Q+ H N++ L +L+ E + G + + L ++ S + + S +I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
+G+ +LH+ K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 125 L----DGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK-- 176
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 177 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L Q+ H N++ L +L+ E + G + + L ++ S + + S +I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
+G+ +LH+ K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 125 L----DGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK-- 176
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 177 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L Q+ H N++ L +L+ E + G + + L ++ S + + S +I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
+G+ +LH+ K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 125 L----DGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 128 EINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKI 187
E++ L Q+ H N++ L +L+ E + G + + L ++ S + + S +I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 188 ALGAANGLAFLHSAEPKVIYRDFKASNI-LLDSNY---NAKLSDFGLARDGPTGDKSHVS 243
+G+ +LH+ K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 125 L----DGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--- 175
Query: 244 TRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 100/262 (38%), Gaps = 47/262 (17%)
Query: 67 LRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQ------ 120
+R +F V+G G FG V + +KR F+
Sbjct: 69 MRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL 128
Query: 121 --GHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQP 178
G +W+T ++Y Q NL ++ Y + D L+ +F R E F
Sbjct: 129 VNGDSKWITTLHYAFQ-DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARF-------- 179
Query: 179 LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFG----LARDG 234
+ M IA+ + + L ++H RD K NIL+D N + +L+DFG L DG
Sbjct: 180 --YLAEMVIAIDSVHQLHYVH--------RDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229
Query: 235 PTGDKSHVSTRVMGTYGYAAPEYL-----ATGHLTAKSDIYSFGVVLLEILSGRRAIDKN 289
S+ +GT Y +PE L G + D +S GV + E+L G
Sbjct: 230 TVQ-----SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE------ 278
Query: 290 RPTGEHNLVEWAKPYLTSKRRI 311
P +LVE + K R
Sbjct: 279 TPFYAESLVETYGKIMNHKERF 300
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 132 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEIL------SGRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILS------GRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 132 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEIL------SGRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 131 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 185
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEIL------SGRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 137 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 191
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEIL------SGRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 232
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 131 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 185
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEIL------SGRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILS------GRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 139 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEIL------SGRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEIL------SGRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 139 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILS------GRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEIL------SGRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 176 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEIL------SGRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 176 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEIL------SGRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILS------GRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILS------GRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 143 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 197
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILS------GRRAIDK 288
APE + D++S G ++ E++ GR ID+
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 238
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
+ VLGEG V T AVK + ++ E+ L Q
Sbjct: 18 EDVLGEGAHARV---------QTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ 68
Query: 137 -HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
H N+++L+ + E+D LV+E M GS+ +H+ +R +F L S+ + A+ L
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR-RHFNELEASV---VVQDVASAL 124
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGP-TGDKSHVSTRVM---- 247
FLH+ + +RD K NIL + K+ DFGL GD S +ST +
Sbjct: 125 DFLHNK--GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC 182
Query: 248 GTYGYAAPEYLATGHLTA-----KSDIYSFGVVLLEILSG 282
G+ Y APE + A + D++S GV+L +LSG
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + T + T Y
Sbjct: 132 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILS------GRRAIDK 288
APE + D++S G ++ E++ GR ID+
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 227
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 116/276 (42%), Gaps = 62/276 (22%)
Query: 57 SNIKNFSYSDLRTATRNFRPDSVLGEGGFGSV-FKGWVDEHSLASTRPGTGMLIAVKRLN 115
+NI NF S L+ + + +LG G G+V F+G +A R MLI +
Sbjct: 4 ANIPNFEQS-LKNLVVS---EKILGYGSSGTVVFQGSFQGRPVAVKR----MLIDFCDIA 55
Query: 116 QEGFQGHKEWLTEINYLGQLH-HPNLVKLVGYCLEDDHRLL----------VYEFMPRGS 164
L EI L + HPN+++ YC E R L + + + +
Sbjct: 56 ----------LMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKN 103
Query: 165 MENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS----- 219
+ + + + P+S LR A+G+A LHS K+I+RD K NIL+ +
Sbjct: 104 VSDENLKLQKEYNPISL-LRQ-----IASGVAHLHSL--KIIHRDLKPQNILVSTSSRFT 155
Query: 220 --------NYNAKLSDFGLARDGPTGDKSHVS--TRVMGTYGYAAPEYLATGH------- 262
N +SDFGL + +G S + GT G+ APE L +
Sbjct: 156 ADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRR 215
Query: 263 LTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLV 298
LT DI+S G V ILS + ++ + E N++
Sbjct: 216 LTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 251
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 105 TGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGS 164
T L+AVK + + G + EI L HPN+V+ L H ++ E+ G
Sbjct: 44 TKELVAVKYI-ERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGE 102
Query: 165 MENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSN--YN 222
+ + G + + + ++ +G+++ HS + + +RD K N LLD +
Sbjct: 103 LYERICNAGRFSEDEARFFFQQL----LSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPR 156
Query: 223 AKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAK-SDIYSFGVVLLEILS 281
K+ DFG ++ + + +GT Y APE L K +D++S GV L +L
Sbjct: 157 LKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLV 213
Query: 282 G 282
G
Sbjct: 214 G 214
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 113/272 (41%), Gaps = 58/272 (21%)
Query: 57 SNIKNFSYSDLRTATRNFRPDSVLGEGGFGSV-FKGWVDEHSLASTRPGTGMLIAVKRLN 115
+NI NF S L+ + + +LG G G+V F+G +A R MLI +
Sbjct: 22 ANIPNFEQS-LKNLVVS---EKILGYGSSGTVVFQGSFQGRPVAVKR----MLIDFCDIA 73
Query: 116 QEGFQGHKEWLTEINYLGQLH-HPNLVKLVGYCLEDDHRLL----------VYEFMPRGS 164
L EI L + HPN+++ YC E R L + + + +
Sbjct: 74 ----------LMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKN 121
Query: 165 MENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS----- 219
+ + + + P+S LR A+G+A LHS K+I+RD K NIL+ +
Sbjct: 122 VSDENLKLQKEYNPISL-LRQ-----IASGVAHLHSL--KIIHRDLKPQNILVSTSSRFT 173
Query: 220 --------NYNAKLSDFGLARDGPTGDKSHVS--TRVMGTYGYAAPEYLATG---HLTAK 266
N +SDFGL + +G GT G+ APE L LT
Sbjct: 174 ADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRS 233
Query: 267 SDIYSFGVVLLEILSGRRAIDKNRPTGEHNLV 298
DI+S G V ILS + ++ + E N++
Sbjct: 234 IDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 117/287 (40%), Gaps = 45/287 (15%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINY 131
++F+ S LG G +G VFK E G L AVKR + F+G K+ ++
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKE---------DGRLYAVKR-SMSPFRGPKDRARKLAE 106
Query: 132 LGQL----HHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYF-QPLSWSLRMK 186
+G HP V+L E+ L + + S++ H G+ + W
Sbjct: 107 VGSHEKVGQHPCCVRLE-QAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRD 165
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
L LA LHS +++ D K +NI L KL DFGL + T V
Sbjct: 166 TLLA----LAHLHSQ--GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE-- 217
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAKPYLT 306
G Y APE L + TA +D++S G+ +LE+ A + P G + + YL
Sbjct: 218 -GDPRYMAPELLQGSYGTA-ADVFSLGLTILEV-----ACNMELPHGGEGWQQLRQGYLP 270
Query: 307 SKRRIFRVLDPRLEGQFSLPQAQKAASLALQCLSVEPKLRPDMDEVV 353
+F+ + + S+ + L +PKLR + ++
Sbjct: 271 P--------------EFTAGLSSELRSVLVMMLEPDPKLRATAEALL 303
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 113/272 (41%), Gaps = 58/272 (21%)
Query: 57 SNIKNFSYSDLRTATRNFRPDSVLGEGGFGSV-FKGWVDEHSLASTRPGTGMLIAVKRLN 115
+NI NF S L+ + + +LG G G+V F+G +A R MLI +
Sbjct: 22 ANIPNFEQS-LKNLVVS---EKILGYGSSGTVVFQGSFQGRPVAVKR----MLIDFCDIA 73
Query: 116 QEGFQGHKEWLTEINYLGQLH-HPNLVKLVGYCLEDDHRLL----------VYEFMPRGS 164
L EI L + HPN+++ YC E R L + + + +
Sbjct: 74 ----------LMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKN 121
Query: 165 MENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS----- 219
+ + + + P+S LR A+G+A LHS K+I+RD K NIL+ +
Sbjct: 122 VSDENLKLQKEYNPISL-LRQ-----IASGVAHLHSL--KIIHRDLKPQNILVSTSSRFT 173
Query: 220 --------NYNAKLSDFGLARDGPTGDKSHVS--TRVMGTYGYAAPEYLATG---HLTAK 266
N +SDFGL + +G GT G+ APE L LT
Sbjct: 174 ADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRS 233
Query: 267 SDIYSFGVVLLEILSGRRAIDKNRPTGEHNLV 298
DI+S G V ILS + ++ + E N++
Sbjct: 234 IDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+G G FG V + D+ S L+AVK + + G + + EI L HPN
Sbjct: 26 IGSGNFG-VARLMRDKQS--------NELVAVKYI-ERGEKIDENVKREIINHRSLRHPN 75
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V+ L H +V E+ G + + G + + + ++ +G+++ H
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----ISGVSYCH 131
Query: 200 SAEPKVIYRDFKASNILLDSN--YNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
+ + V +RD K N LLD + K+ DFG ++ + + +GT Y APE
Sbjct: 132 AMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEV 186
Query: 258 LATGHLTAK-SDIYSFGVVLLEILSG 282
L K +D++S GV L +L G
Sbjct: 187 LLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH-H 137
+LGEG + V +G V + G AVK + ++ E+ L Q +
Sbjct: 20 LLGEGAYAKV-QGAVSLQN--------GKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 138 PNLVKLVGYCLEDDHRL-LVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
N+++L+ + EDD R LV+E + GS+ H+ ++ +F S ++ A L
Sbjct: 71 KNILELIEF-FEDDTRFYLVFEKLQGGSILAHI-QKQKHFNEREAS---RVVRDVAAALD 125
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLA-----RDGPTGDKSHVSTRVMG 248
FLH+ + +RD K NIL +S K+ DF L + T + T G
Sbjct: 126 FLHTK--GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCG 183
Query: 249 TYGYAAPEYLA--TGHLT---AKSDIYSFGVVLLEILSG 282
+ Y APE + T T + D++S GVVL +LSG
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 91/224 (40%), Gaps = 37/224 (16%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-----------KEWLTE 128
+ G +G+V G E G+ +A+KR+ G K L E
Sbjct: 30 ISSGSYGAVCAGVDSE----------GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE 79
Query: 129 INYLGQLHHPNLVKLVGYCLEDD----HRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR 184
I L HHPN++ L + + H+L + + R + + + P
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYF 139
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR-DGPTGDKSHVS 243
M L GL LH E V++RD NILL N + + DF LAR D +K+H
Sbjct: 140 MYHILL---GLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYV 194
Query: 244 TRVMGTYGYAAPEYLATGH-LTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE + T D++S G V+ E+ + R+A+
Sbjct: 195 TH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN-RKAL 233
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 99/245 (40%), Gaps = 60/245 (24%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEIN 130
N+ ++G G +G V+ + T +A+K++N+ E K L EI
Sbjct: 27 NYIIKHLIGRGSYGYVYLAY---------DKNTEKNVAIKKVNRMFEDLIDCKRILREIT 77
Query: 131 YLGQLHHPNLVKLVGYCLEDD-----HRLLVYEFMP---RGSMENHLFRRGSYFQPLSWS 182
L +L +++L + DD +V E + + +F + + + ++
Sbjct: 78 ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYN 137
Query: 183 LRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARD--------- 233
L + G F+H E +I+RD K +N LL+ + + K+ DFGLAR
Sbjct: 138 LLL--------GENFIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNI 187
Query: 234 ----------GPTGDK------SHVSTRVMGTYGYAAPE-YLATGHLTAKSDIYSFGVVL 276
GP SHV TR Y APE L + T DI+S G +
Sbjct: 188 VNDLEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIF 242
Query: 277 LEILS 281
E+L+
Sbjct: 243 AELLN 247
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR T S + + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILS------GRRAIDK 288
APE + DI+S G ++ E++ GR ID+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQ 233
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
Query: 74 FRPDSVLGEGGFGSVFKGW--VDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEWLTEIN 130
+ DS++G+G FG V K + V++ +A+K + N++ F + +
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQE-----------WVAIKIIKNKKAFLNQAQIEVRLL 85
Query: 131 YLGQLHHPNL----VKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
L H + V L + + +H LV+E + S + R + F+ +S +L K
Sbjct: 86 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRK 142
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A L FL + E +I+ D K NILL N K S + G + +
Sbjct: 143 FAQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQX 199
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ + Y +PE L D++S G +L+E+ +G
Sbjct: 200 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 91/224 (40%), Gaps = 37/224 (16%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-----------KEWLTE 128
+ G +G+V G E G+ +A+KR+ G K L E
Sbjct: 30 ISSGSYGAVCAGVDSE----------GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE 79
Query: 129 INYLGQLHHPNLVKLVGYCLEDD----HRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLR 184
I L HHPN++ L + + H+L + + R + + + P
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYF 139
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR-DGPTGDKSHVS 243
M L GL LH E V++RD NILL N + + DF LAR D +K+H
Sbjct: 140 MYHILL---GLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYV 194
Query: 244 TRVMGTYGYAAPEYLATGH-LTAKSDIYSFGVVLLEILSGRRAI 286
T Y APE + T D++S G V+ E+ + R+A+
Sbjct: 195 TH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN-RKAL 233
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
Query: 74 FRPDSVLGEGGFGSVFKGW--VDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEWLTEIN 130
+ DS++G+G FG V K + V++ +A+K + N++ F + +
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQE-----------WVAIKIIKNKKAFLNQAQIEVRLL 104
Query: 131 YLGQLHHPNL----VKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
L H + V L + + +H LV+E + S + R + F+ +S +L K
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRK 161
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRV 246
A L FL + E +I+ D K NILL N K S + G + +
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQX 218
Query: 247 MGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
+ + Y +PE L D++S G +L+E+ +G
Sbjct: 219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 60/278 (21%)
Query: 50 EGEILQSSNIKNFSYSDLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLI 109
E Q + IKN D N+ ++G G +G V+ + D+++ + +
Sbjct: 12 ENLYFQGAIIKNVKVPD------NYEIKHLIGRGSYGYVYLAY-DKNANKN--------V 56
Query: 110 AVKRLNQ--EGFQGHKEWLTEINYLGQLHHPNLVKLVGYCL-ED----DHRLLVYEFMP- 161
A+K++N+ E K L EI L +L +++L + ED D +V E
Sbjct: 57 AIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADS 116
Query: 162 --RGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS 219
+ + +F + + + ++L + G F+H E +I+RD K +N LL+
Sbjct: 117 DLKKLFKTPIFLTEQHVKTILYNLLL--------GEKFIH--ESGIIHRDLKPANCLLNQ 166
Query: 220 NYNAKLSDFGLARDGPTGDKSHVS-----------------------TRVMGTYGYAAPE 256
+ + K+ DFGLAR + H+ T + T Y APE
Sbjct: 167 DCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPE 226
Query: 257 -YLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTG 293
L + T DI+S G + E+L+ ++ N PT
Sbjct: 227 LILLQENYTNSIDIWSTGCIFAELLNMMKS-HINNPTN 263
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 104 GTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRG 163
T M AVK +++ +E + Y GQ HPN++ L + H LV E M G
Sbjct: 50 ATNMEYAVKVIDKSKRDPSEEIEILLRY-GQ--HPNIITLKDVYDDGKHVYLVTELMRGG 106
Query: 164 SMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNIL-LDSNYN 222
+ + + R+ +F S + + +LHS V++RD K SNIL +D + N
Sbjct: 107 ELLDKILRQ-KFFSEREASFVLHTI---GKTVEYLHSQ--GVVHRDLKPSNILYVDESGN 160
Query: 223 A---KLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEI 279
++ DFG A+ ++ + T + APE L DI+S G++L +
Sbjct: 161 PECLRICDFGFAKQ--LRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTM 218
Query: 280 LSG 282
L+G
Sbjct: 219 LAG 221
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+G G FG V + D+ S L+AVK + + G + EI L HPN
Sbjct: 27 IGSGNFG-VARLMRDKQS--------NELVAVKYI-ERGEKIAANVKREIINHRSLRHPN 76
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V+ L H +V E+ G + + G + + + ++ +G+++ H
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----ISGVSYCH 132
Query: 200 SAEPKVIYRDFKASNILLDSN--YNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
+ + V +RD K N LLD + K+ DFG ++ + + +GT Y APE
Sbjct: 133 AMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEV 187
Query: 258 LATGHLTAK-SDIYSFGVVLLEILSG 282
L K +D++S GV L +L G
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
+ VLGEG V T AVK + ++ E+ L Q
Sbjct: 18 EDVLGEGAHARV---------QTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ 68
Query: 137 -HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGL 195
H N+++L+ + E+D LV+E M GS+ +H+ +R +F L S+ + A+ L
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR-RHFNELEASV---VVQDVASAL 124
Query: 196 AFLHSAEPKVIYRDFKASNILLDSNYN---AKLSDFGLARDGP-TGDKSHVSTRVM---- 247
FLH+ + +RD K NIL + K+ DF L GD S +ST +
Sbjct: 125 DFLHNK--GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC 182
Query: 248 GTYGYAAPEYLATGHLTA-----KSDIYSFGVVLLEILSG 282
G+ Y APE + A + D++S GV+L +LSG
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 104 GTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRG 163
T M AVK +++ +E + Y GQ HPN++ L + + +V E M G
Sbjct: 45 ATNMEFAVKIIDKSKRDPTEEIEILLRY-GQ--HPNIITLKDVYDDGKYVYVVTELMKGG 101
Query: 164 SMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNIL-LDSNYN 222
+ + + R+ + + + ++ I + +LH+ V++RD K SNIL +D + N
Sbjct: 102 ELLDKILRQKFFSEREASAVLFTIT----KTVEYLHAQ--GVVHRDLKPSNILYVDESGN 155
Query: 223 ---AKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEI 279
++ DFG A+ ++ + T + APE L A DI+S GV+L +
Sbjct: 156 PESIRICDFGFAKQ--LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTM 213
Query: 280 LSG 282
L+G
Sbjct: 214 LTG 216
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-----KEWLTEINYLG 133
V+G+G F SV + ++ TG AVK ++ F ++ E +
Sbjct: 33 VIGKGPF-SVVRRCINRE--------TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 83
Query: 134 QLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR---GSYFQPLSWSLRMKIALG 190
L HP++V+L+ D +V+EFM + + +R G + S M+ L
Sbjct: 84 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 143
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA---KLSDFGLARDGPTGDKSHVSTRVM 247
A L + H + +I+RD K +LL S N+ KL FG+A G+ V+ +
Sbjct: 144 A---LRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRV 196
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT + APE + D++ GV+L +LSG
Sbjct: 197 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Query: 108 LIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMEN 167
L+AVK + + G + + EI L HPN+V+ L H +V E+ G +
Sbjct: 46 LVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 168 HLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSN--YNAKL 225
+ G + + + ++ +G+++ H+ + V +RD K N LLD + K+
Sbjct: 105 RICNAGRFSEDEARFFFQQL----ISGVSYAHAMQ--VAHRDLKLENTLLDGSPAPRLKI 158
Query: 226 SDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAK-SDIYSFGVVLLEILSG 282
+DFG ++ + + +GT Y APE L K +D++S GV L +L G
Sbjct: 159 ADFGYSKASVLHSQPKSA---VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 28/218 (12%)
Query: 74 FRPDSVLGEGGFGSVFKGW--VDEHSLASTRPGTGMLIAVKRL-NQEGFQGHKEWLTEIN 130
+ DS++G+G FG V K + V++ +A+K + N++ F + +
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQE-----------WVAIKIIKNKKAFLNQAQIEVRLL 104
Query: 131 YLGQLHHPNL----VKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMK 186
L H + V L + + +H LV+E + S + R + F+ +S +L K
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRK 161
Query: 187 IALGAANGLAFLHSAEPKVIYRDFKASNILLDS--NYNAKLSDFGLARDGPTGDKSHVST 244
A L FL + E +I+ D K NILL + K+ DFG + + +
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQS 221
Query: 245 RVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
R Y +PE L D++S G +L+E+ +G
Sbjct: 222 RF-----YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
G+ LHSA +I+RD K SNI++ S+ K+ DFGLAR G + V+ Y Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-YR 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILS------GRRAIDK 288
APE + D++S G ++ E++ GR ID+
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 233
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 104 GTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRG 163
T M AVK +++ +E + Y GQ HPN++ L + H LV E M G
Sbjct: 50 ATNMEYAVKVIDKSKRDPSEEIEILLRY-GQ--HPNIITLKDVYDDGKHVYLVTELMRGG 106
Query: 164 SMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNIL-LDSNYN 222
+ + + R+ +F S + + +LHS V++RD K SNIL +D + N
Sbjct: 107 ELLDKILRQ-KFFSEREASFVLHTI---GKTVEYLHSQ--GVVHRDLKPSNILYVDESGN 160
Query: 223 ---AKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEI 279
++ DFG A+ + + T T + APE L DI+S G++L +
Sbjct: 161 PECLRICDFGFAKQ-LRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTM 218
Query: 280 LSG 282
L+G
Sbjct: 219 LAG 221
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGH-----KEWLTEINYLG 133
V+G+G F SV + ++ TG AVK ++ F ++ E +
Sbjct: 31 VIGKGPF-SVVRRCINRE--------TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 134 QLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRR---GSYFQPLSWSLRMKIALG 190
L HP++V+L+ D +V+EFM + + +R G + S M+ L
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNA---KLSDFGLARDGPTGDKSHVSTRVM 247
A L + H + +I+RD K +LL S N+ KL FG+A G+ V+ +
Sbjct: 142 A---LRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRV 194
Query: 248 GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
GT + APE + D++ GV+L +LSG
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 185 MKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGDKSHVST 244
+ I + A + FLHS +++RD K SNI + K+ DFGL ++
Sbjct: 167 LHIFIQIAEAVEFLHSK--GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 245 RVM----------GTYGYAAPEYLATGHLTAKSDIYSFGVVLLEIL 280
M GT Y +PE + + + K DI+S G++L E+L
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Query: 73 NFRPDSVLGEGGFGSVF--KGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEIN 130
+F P +G GGFG VF K VD+ + A R ++ N+E ++ + E+
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKR--------IRLPNRE--LAREKVMREVK 56
Query: 131 YLGQLHHPNLVKLVGYCLE 149
L +L HP +V+ LE
Sbjct: 57 ALAKLEHPGIVRYFNAWLE 75
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 114/276 (41%), Gaps = 62/276 (22%)
Query: 57 SNIKNFSYSDLRTATRNFRPDSVLGEGGFGSV-FKGWVDEHSLASTRPGTGMLIAVKRLN 115
+NI NF S L+ + + +LG G G+V F+G +A R MLI +
Sbjct: 4 ANIPNFEQS-LKNLVVS---EKILGYGSSGTVVFQGSFQGRPVAVKR----MLIDFCDIA 55
Query: 116 QEGFQGHKEWLTEINYLGQLH-HPNLVKLVGYCLEDDHRLL----------VYEFMPRGS 164
L EI L + HPN+++ YC E R L + + + +
Sbjct: 56 ----------LMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKN 103
Query: 165 MENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDS----- 219
+ + + + P+S LR A+G+A LHS K+I+RD K NIL+ +
Sbjct: 104 VSDENLKLQKEYNPISL-LRQ-----IASGVAHLHSL--KIIHRDLKPQNILVSTSSRFT 155
Query: 220 --------NYNAKLSDFGLARDGPTGDKSHVS--TRVMGTYGYAAPEYLATGH------- 262
N +SDFGL + +G GT G+ APE L +
Sbjct: 156 ADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRR 215
Query: 263 LTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLV 298
LT DI+S G V ILS + ++ + E N++
Sbjct: 216 LTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 251
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 51/237 (21%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQ--EGFQGHKEWLTEINYLGQLH 136
++G G +G V + + ++A+K++ + E K L EI L +L+
Sbjct: 60 LIGTGSYGHVCEAY---------DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 137 HPNLVKLVGYCLEDD-----HRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIAL-G 190
H ++VK++ + D +V E S LFR Y L +K L
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIA--DSDFKKLFRTPVYLT----ELHIKTLLYN 164
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLAR--DGPTGDKSHVS----- 243
G+ ++HSA +++RD K +N L++ + + K+ DFGLAR D P S +
Sbjct: 165 LLVGVKYVHSA--GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPRE 222
Query: 244 ------------------TRVMGTYGYAAPE-YLATGHLTAKSDIYSFGVVLLEILS 281
T + T Y APE L + T D++S G + E+L+
Sbjct: 223 DDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G+G FG V K + +H + +A+K + E + H++ EI L L
Sbjct: 104 VIGKGSFGQVVKAY--DHKVHQH-------VALKMVRNEK-RFHRQAAEEIRILEHLRKQ 153
Query: 139 ------NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAA 192
N++ ++ +H + +E + SM + + + FQ S L K A
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSIL 210
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNA--KLSDFGLARDGPTGDKSHVSTRVMGTY 250
L LH ++I+ D K NILL + K+ DFG + + V T + +
Sbjct: 211 QCLDALHKN--RIIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYTXIQSRF 264
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y APE + D++S G +L E+L+G
Sbjct: 265 -YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
++ +G G +G V + + GT + A K++ + + + EI + L
Sbjct: 14 ENTIGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
HPN+++L ++ LV E G LF R + + S +I + +A
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGG----ELFERVVHKRVFRESDAARIMKDVLSAVA 120
Query: 197 FLHSAEPKVIYRDFKASNILL--DS-NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
+ H V +RD K N L DS + KL DFGLA G + T+V GT Y
Sbjct: 121 YCHKL--NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKV-GTPYYV 175
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
+P+ L G + D +S GV++ +L G
Sbjct: 176 SPQVLE-GLYGPECDEWSAGVMMYVLLCG 203
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 28/212 (13%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G+G FG V K + +H + +A+K + E + H++ EI L L
Sbjct: 104 VIGKGSFGQVVKAY--DHKVHQH-------VALKMVRNEK-RFHRQAAEEIRILEHLRKQ 153
Query: 139 ------NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAA 192
N++ ++ +H + +E + SM + + + FQ S L K A
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSIL 210
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNA--KLSDFGLARDGPTGDKSHVSTRVMGTY 250
L LH ++I+ D K NILL + K+ DFG + V T + +
Sbjct: 211 QCLDALHKN--RIIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRVYTXIQSRF 264
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y APE + D++S G +L E+L+G
Sbjct: 265 -YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 77 DSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
++ +G G +G V + + GT + A K++ + + + EI + L
Sbjct: 31 ENTIGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 81
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
HPN+++L ++ LV E G LF R + + S +I + +A
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGG----ELFERVVHKRVFRESDAARIMKDVLSAVA 137
Query: 197 FLHSAEPKVIYRDFKASNILL--DS-NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYA 253
+ H V +RD K N L DS + KL DFGLA G + T+V GT Y
Sbjct: 138 YCHKL--NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKV-GTPYYV 192
Query: 254 APEYLATGHLTAKSDIYSFGVVLLEILSG 282
+P+ L G + D +S GV++ +L G
Sbjct: 193 SPQVLE-GLYGPECDEWSAGVMMYVLLCG 220
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 30/215 (13%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT------EINYL 132
+LG GGFGSV+ G R + +A+K + ++ E E+ L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 133 GQLH--HPNLVKLVGYCLEDDHRLLVYEFM-PRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
++ +++L+ + D +L+ E M P + + + RG+ + L+ S ++
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVL- 124
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNY-NAKLSDFGLARDGPTGDKSHVSTRVMG 248
A H V++RD K NIL+D N KL DFG K V T G
Sbjct: 125 -----EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFDG 175
Query: 249 TYGYAAPEYLATGHLTAKS-DIYSFGVVLLEILSG 282
T Y+ PE++ +S ++S G++L +++ G
Sbjct: 176 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+G G FG V + D+ S L+AVK + + G + + EI L HPN
Sbjct: 27 IGSGNFG-VARLMRDKQS--------NELVAVKYI-ERGEKIDENVKREIINHRSLRHPN 76
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V+ L H +V E+ G + + G + + + ++ +G+++ H
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----ISGVSYCH 132
Query: 200 SAEPKVIYRDFKASNILLDSN--YNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
+ + V +RD K N LLD + K+ FG ++ + + +GT Y APE
Sbjct: 133 AMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST---VGTPAYIAPEV 187
Query: 258 LATGHLTAK-SDIYSFGVVLLEILSG 282
L K +D++S GV L +L G
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 154 LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKAS 213
L+V E + G + + + RG Q + +I + +LHS + +RD K
Sbjct: 96 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPE 151
Query: 214 NILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIY 270
N+L S N KL+DFG A++ T + ++T Y Y APE L D++
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 208
Query: 271 SFGVVLLEILSG 282
S GV++ +L G
Sbjct: 209 SLGVIMYILLCG 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 154 LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKAS 213
L+V E + G + + + RG Q + +I + +LHS + +RD K
Sbjct: 95 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPE 150
Query: 214 NILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIY 270
N+L S N KL+DFG A++ T + ++T Y Y APE L D++
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 207
Query: 271 SFGVVLLEILSG 282
S GV++ +L G
Sbjct: 208 SLGVIMYILLCG 219
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 154 LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKAS 213
L+V E + G + + + RG Q + +I + +LHS + +RD K
Sbjct: 91 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPE 146
Query: 214 NILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIY 270
N+L S N KL+DFG A++ T + ++T Y Y APE L D++
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 203
Query: 271 SFGVVLLEILSG 282
S GV++ +L G
Sbjct: 204 SLGVIMYILLCG 215
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 154 LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKAS 213
L+V E + G + + + RG Q + +I + +LHS + +RD K
Sbjct: 97 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPE 152
Query: 214 NILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIY 270
N+L S N KL+DFG A++ T + ++T Y Y APE L D++
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 209
Query: 271 SFGVVLLEILSG 282
S GV++ +L G
Sbjct: 210 SLGVIMYILLCG 221
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 154 LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKAS 213
L+V E + G + + + RG Q + +I + +LHS + +RD K
Sbjct: 91 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPE 146
Query: 214 NILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIY 270
N+L S N KL+DFG A++ T + ++T Y Y APE L D++
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 203
Query: 271 SFGVVLLEILSG 282
S GV++ +L G
Sbjct: 204 SLGVIMYILLCG 215
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPN 139
+G G FG V + D+ S L+AVK + + G + + EI L HPN
Sbjct: 27 IGSGNFG-VARLMRDKQS--------NELVAVKYI-ERGEKIDENVKREIINHRSLRHPN 76
Query: 140 LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLH 199
+V+ L H +V E+ G + + G + + + ++ +G+++ H
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----ISGVSYCH 132
Query: 200 SAEPKVIYRDFKASNILLDSN--YNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEY 257
+ + V +RD K N LLD + K+ FG ++ + +GT Y APE
Sbjct: 133 AMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PKDTVGTPAYIAPEV 187
Query: 258 LATGHLTAK-SDIYSFGVVLLEILSG 282
L K +D++S GV L +L G
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 154 LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKAS 213
L+V E + G + + + RG Q + +I + +LHS + +RD K
Sbjct: 89 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPE 144
Query: 214 NILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIY 270
N+L S N KL+DFG A++ T + ++T Y Y APE L D++
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 201
Query: 271 SFGVVLLEILSG 282
S GV++ +L G
Sbjct: 202 SLGVIMYILLCG 213
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 154 LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKAS 213
L+V E + G + + + RG Q + +I + +LHS + +RD K
Sbjct: 135 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPE 190
Query: 214 NILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIY 270
N+L S N KL+DFG A++ T + ++T Y Y APE L D++
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 247
Query: 271 SFGVVLLEILSG 282
S GV++ +L G
Sbjct: 248 SLGVIMYILLCG 259
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 154 LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKAS 213
L+V E + G + + + RG Q + +I + +LHS + +RD K
Sbjct: 141 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPE 196
Query: 214 NILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIY 270
N+L S N KL+DFG A++ T + ++T Y Y APE L D++
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 253
Query: 271 SFGVVLLEILSG 282
S GV++ +L G
Sbjct: 254 SLGVIMYILLCG 265
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 154 LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKAS 213
L+V E + G + + + RG Q + +I + +LHS + +RD K
Sbjct: 90 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPE 145
Query: 214 NILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIY 270
N+L S N KL+DFG A++ T + ++T Y Y APE L D++
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 202
Query: 271 SFGVVLLEILSG 282
S GV++ +L G
Sbjct: 203 SLGVIMYILLCG 214
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 154 LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKAS 213
L+V E + G + + + RG Q + +I + +LHS + +RD K
Sbjct: 105 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPE 160
Query: 214 NILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIY 270
N+L S N KL+DFG A++ T + ++T Y Y APE L D++
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 217
Query: 271 SFGVVLLEILSG 282
S GV++ +L G
Sbjct: 218 SLGVIMYILLCG 229
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 194 GLAFLHSAEPKVIYRDFKASNILLDSNY---NAKLSDFGLARDGPTGDKSHVSTRVMGTY 250
G+ +LH + +++ D K NILL S Y + K+ DFG++R G + +MGT
Sbjct: 143 GVYYLH--QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELR-EIMGTP 197
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILS 281
Y APE L +T +D+++ G++ +L+
Sbjct: 198 EYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 154 LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKAS 213
L++ E M G + + + RG Q + +I + FLHS + +RD K
Sbjct: 83 LIIMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLHSH--NIAHRDVKPE 138
Query: 214 NILLDSNYN---AKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIY 270
N+L S KL+DFG A++ ++ + T Y Y APE L D++
Sbjct: 139 NLLYTSKEKDAVLKLTDFGFAKET---TQNALQTPCYTPY-YVAPEVLGPEKYDKSCDMW 194
Query: 271 SFGVVLLEILSG 282
S GV++ +L G
Sbjct: 195 SLGVIMYILLCG 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 154 LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKAS 213
L++ E M G + + + RG Q + +I + FLHS + +RD K
Sbjct: 102 LIIMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLHSH--NIAHRDVKPE 157
Query: 214 NILLDSNYN---AKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIY 270
N+L S KL+DFG A++ ++ + T Y Y APE L D++
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFAKET---TQNALQTPCYTPY-YVAPEVLGPEKYDKSCDMW 213
Query: 271 SFGVVLLEILSG 282
S GV++ +L G
Sbjct: 214 SLGVIMYILLCG 225
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 36/218 (16%)
Query: 78 SVLGEGGFGSVFKG-WVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH 136
++G+G FG V+ G W H + R LI ++R N++ + K E+ Q
Sbjct: 39 ELIGKGRFGQVYHGRW---HGEVAIR-----LIDIERDNEDQLKAFKR---EVMAYRQTR 87
Query: 137 HPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLA 196
H N+V +G C+ H L + + +G + R L + +IA G+
Sbjct: 88 HENVVLFMGACMSPPH-LAIITSLCKGRTLYSVVRDAKIV--LDVNKTRQIAQEIVKGMG 144
Query: 197 FLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGL------ARDGPTGDKSHVSTRVMGTY 250
+LH+ ++++D K+ N+ D N ++DFGL + G DK + G
Sbjct: 145 YLHAK--GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQN---GWL 198
Query: 251 GYAAPEYLATGH---------LTAKSDIYSFGVVLLEI 279
+ APE + + SD+++ G + E+
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 91/228 (39%), Gaps = 44/228 (19%)
Query: 80 LGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLH--H 137
LGEG FG V + +H ++ V R + +EI L L+
Sbjct: 22 LGEGAFGKVVECI--DHKAGGRHVAVKIVKNVDRYCEAA-------RSEIQVLEHLNTTD 72
Query: 138 PN----LVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAAN 193
PN V+++ + H +V+E + + + F + + F P K+A
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELL---GLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 194 GLAFLHSAEPKVIYRDFKASNIL-LDSNY------------------NAKLSDFGLARDG 234
+ FLHS K+ + D K NIL + S+Y + K+ DFG A
Sbjct: 130 SVNFLHSN--KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--- 184
Query: 235 PTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
T D H ST V T Y APE + + D++S G +L+E G
Sbjct: 185 -TYDDEHHSTLV-STRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 154 LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKAS 213
L+V E + G + + + RG Q + +I + +LHS + +RD K
Sbjct: 89 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPE 144
Query: 214 NILLDS---NYNAKLSDFGLARDGPTGDKSHVS-TRVMGTYGYAAPEYLATGHLTAKSDI 269
N+L S N KL+DFG A++ SH S T T Y APE L D+
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKET----TSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 270 YSFGVVLLEILSG 282
+S GV++ +L G
Sbjct: 201 WSLGVIMYILLCG 213
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 113/291 (38%), Gaps = 45/291 (15%)
Query: 73 NFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQE-GFQGHKEWLTEINY 131
+ P LG G +G V K +G + AVKR+ Q K L +++
Sbjct: 35 DLEPIXELGRGAYGVVEK---------XRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDI 85
Query: 132 LGQ-LHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALG 190
+ + P V G + + E + S++ + Q + + KIA+
Sbjct: 86 SXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVS 144
Query: 191 AANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGL--------ARDGPTGDKSHV 242
L LHS + VI+RD K SN+L+++ K DFG+ A+D G K +
Sbjct: 145 IVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYX 203
Query: 243 STRVMGTYGYAAPEYLATGHLTAKSDIYSFGVVLLEILSGRRAIDKNRPTGEHNLVEWAK 302
+ + PE G+ + KSDI+S G+ +E+ R D W
Sbjct: 204 APERIN------PELNQKGY-SVKSDIWSLGITXIELAILRFPYDS-----------WGT 245
Query: 303 PYLTSKRRIFRVLDPRLEG-QFSLPQAQKAASLALQCLSVEPKLRPDMDEV 352
P+ K ++ P+L +FS + QCL K RP E+
Sbjct: 246 PFQQLK-QVVEEPSPQLPADKFS----AEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 28/212 (13%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHP 138
V+G+G FG V K + +H + +A+K + E + H++ EI L L
Sbjct: 104 VIGKGXFGQVVKAY--DHKVHQH-------VALKMVRNEK-RFHRQAAEEIRILEHLRKQ 153
Query: 139 ------NLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAA 192
N++ ++ +H + +E + SM + + + FQ S L K A
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSIL 210
Query: 193 NGLAFLHSAEPKVIYRDFKASNILLDSNYNA--KLSDFGLARDGPTGDKSHVSTRVMGTY 250
L LH ++I+ D K NILL + K+ DFG + + V + +
Sbjct: 211 QCLDALHKN--RIIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYXXIQSRF 264
Query: 251 GYAAPEYLATGHLTAKSDIYSFGVVLLEILSG 282
Y APE + D++S G +L E+L+G
Sbjct: 265 -YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 154 LLVYEFMPRGSMENHLFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKAS 213
L+V E + G + + + RG Q + +I + +LHS + +RD K
Sbjct: 135 LIVXECLDGGELFSRIQDRGD--QAFTEREASEIXKSIGEAIQYLHSI--NIAHRDVKPE 190
Query: 214 NILLDS---NYNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDIY 270
N+L S N KL+DFG A++ T + ++T Y Y APE L D +
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXW 247
Query: 271 SFGVVLLEILSG 282
S GV+ +L G
Sbjct: 248 SLGVIXYILLCG 259
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 43/230 (18%)
Query: 72 RNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLI-----AVKRLNQEGFQ------ 120
+F V+G G FG V + +T M I +KR F+
Sbjct: 74 EDFEIIKVIGRGAFGEVAVV-----KMKNTERIYAMKILNKWEMLKRAETACFREERDVL 128
Query: 121 --GHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENHLFRRGSYFQP 178
G +W+T ++Y Q +L ++ Y + D L+ +F + + F G
Sbjct: 129 VNGDCQWITALHYAFQ-DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG----- 182
Query: 179 LSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDFGLARDGPTGD 238
M +A+ + + L ++H RD K N+LLD N + +L+DFG D
Sbjct: 183 -----EMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFGSCL-KMNDD 228
Query: 239 KSHVSTRVMGTYGYAAPEYL-----ATGHLTAKSDIYSFGVVLLEILSGR 283
+ S+ +GT Y +PE L G + D +S GV + E+L G
Sbjct: 229 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT------EINYL 132
+LG GGFGSV+ G R + +A+K + ++ E E+ L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 133 GQLH--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
++ +++L+ + D +L+ E P + + + RG+ + L+ S ++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL- 152
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNY-NAKLSDFGLARDGPTGDKSHVSTRVMG 248
A H V++RD K NIL+D N KL DFG K V T G
Sbjct: 153 -----EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFDG 203
Query: 249 TYGYAAPEYLATGHLTAKS-DIYSFGVVLLEILSG 282
T Y+ PE++ +S ++S G++L +++ G
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT------EINYL 132
+LG GGFGSV+ G R + +A+K + ++ E E+ L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 133 GQLH--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
++ +++L+ + D +L+ E P + + + RG+ + L+ S ++
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL- 139
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDKSHVSTRVMG 248
A H V++RD K NIL+D N KL DFG K V T G
Sbjct: 140 -----EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFDG 190
Query: 249 TYGYAAPEYLATGHLTAKS-DIYSFGVVLLEILSG 282
T Y+ PE++ +S ++S G++L +++ G
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 94/240 (39%), Gaps = 51/240 (21%)
Query: 66 DLRTATRNFRPDSVLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGF------ 119
+++ +F V+G G FG V T + A+K LN+
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEV---------AVVKMKNTERIYAMKILNKWEMLKRAET 134
Query: 120 -----------QGHKEWLTEINYLGQLHHPNLVKLVGYCLEDDHRLLVYEFMPRGSMENH 168
G +W+T ++Y Q +L ++ Y + D L+ +F + +
Sbjct: 135 ACFREERDVLVNGDCQWITALHYAFQ-DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA 193
Query: 169 LFRRGSYFQPLSWSLRMKIALGAANGLAFLHSAEPKVIYRDFKASNILLDSNYNAKLSDF 228
F G M +A+ + + L ++H RD K N+LLD N + +L+DF
Sbjct: 194 RFYIG----------EMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADF 235
Query: 229 GLARDGPTGDKSHVSTRVMGTYGYAAPEYL-----ATGHLTAKSDIYSFGVVLLEILSGR 283
G D + S+ +GT Y +PE L G + D +S GV + E+L G
Sbjct: 236 GSCLK-MNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT------EINYL 132
+LG GGFGSV+ G R + +A+K + ++ E E+ L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 133 GQLH--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
++ +++L+ + D +L+ E P + + + RG+ + L+ S ++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL- 140
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDKSHVSTRVMG 248
A H V++RD K NIL+D N KL DFG K V T G
Sbjct: 141 -----EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFDG 191
Query: 249 TYGYAAPEYLATGHLTAKS-DIYSFGVVLLEILSG 282
T Y+ PE++ +S ++S G++L +++ G
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT------EINYL 132
+LG GGFGSV+ G R + +A+K + ++ E E+ L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 133 GQLH--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
++ +++L+ + D +L+ E P + + + RG+ + L+ S ++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL- 140
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDKSHVSTRVMG 248
A H V++RD K NIL+D N KL DFG K V T G
Sbjct: 141 -----EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFDG 191
Query: 249 TYGYAAPEYLATGHLTAKS-DIYSFGVVLLEILSG 282
T Y+ PE++ +S ++S G++L +++ G
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT------EINYL 132
+LG GGFGSV+ G R + +A+K + ++ E E+ L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 133 GQLH--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
++ +++L+ + D +L+ E P + + + RG+ + L+ S ++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL- 140
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDKSHVSTRVMG 248
A H V++RD K NIL+D N KL DFG K V T G
Sbjct: 141 -----EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFDG 191
Query: 249 TYGYAAPEYLATGHLTAKS-DIYSFGVVLLEILSG 282
T Y+ PE++ +S ++S G++L +++ G
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 79 VLGEGGFGSVFKGWVDEHSLASTRPGTGMLIAVKRLNQEGFQGHKEWLT------EINYL 132
+LG GGFGSV+ G R + +A+K + ++ E E+ L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 133 GQLH--HPNLVKLVGYCLEDDHRLLVYEF-MPRGSMENHLFRRGSYFQPLSWSLRMKIAL 189
++ +++L+ + D +L+ E P + + + RG+ + L+ S ++
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL- 139
Query: 190 GAANGLAFLHSAEPKVIYRDFKASNILLDSNYNA-KLSDFGLARDGPTGDKSHVSTRVMG 248
A H V++RD K NIL+D N KL DFG K V T G
Sbjct: 140 -----EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG----ALLKDTVYTDFDG 190
Query: 249 TYGYAAPEYLATGHLTAKS-DIYSFGVVLLEILSG 282
T Y+ PE++ +S ++S G++L +++ G
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,780,708
Number of Sequences: 62578
Number of extensions: 483351
Number of successful extensions: 3627
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 1010
Number of HSP's gapped (non-prelim): 1088
length of query: 398
length of database: 14,973,337
effective HSP length: 101
effective length of query: 297
effective length of database: 8,652,959
effective search space: 2569928823
effective search space used: 2569928823
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)