Query 015916
Match_columns 398
No_of_seqs 246 out of 2270
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 02:06:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015916.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015916hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 3.3E-43 7.2E-48 358.1 30.7 367 9-395 22-421 (591)
2 PF06813 Nodulin-like: Nodulin 100.0 3.2E-35 7E-40 269.4 25.1 246 13-258 1-249 (250)
3 TIGR00890 2A0111 Oxalate/Forma 99.9 1.5E-24 3.3E-29 210.9 21.0 269 12-397 1-272 (377)
4 KOG2504 Monocarboxylate transp 99.9 2.7E-24 5.8E-29 217.7 17.4 314 10-394 41-362 (509)
5 TIGR02332 HpaX 4-hydroxyphenyl 99.9 7.2E-23 1.6E-27 203.9 20.7 292 11-396 4-310 (412)
6 PRK11663 regulatory protein Uh 99.9 8.3E-22 1.8E-26 197.5 19.5 156 13-175 21-179 (434)
7 PRK09556 uhpT sugar phosphate 99.9 9E-22 2E-26 199.1 18.4 272 30-396 45-325 (467)
8 PRK09705 cynX putative cyanate 99.9 3.3E-21 7.2E-26 190.7 21.4 244 30-396 25-271 (393)
9 TIGR00892 2A0113 monocarboxyla 99.9 9.6E-21 2.1E-25 191.0 22.3 284 11-392 15-303 (455)
10 COG2271 UhpC Sugar phosphate p 99.9 1.4E-21 3E-26 187.1 14.8 284 13-396 27-319 (448)
11 PLN00028 nitrate transmembrane 99.9 1.7E-20 3.7E-25 190.2 22.7 263 30-396 52-319 (476)
12 PRK12307 putative sialic acid 99.9 1.1E-20 2.4E-25 188.4 20.6 164 5-176 9-175 (426)
13 TIGR00891 2A0112 putative sial 99.9 2.7E-20 5.9E-25 183.3 21.0 180 9-195 6-190 (405)
14 PRK03545 putative arabinose tr 99.9 5.5E-20 1.2E-24 181.6 23.1 263 10-396 4-272 (390)
15 PRK11551 putative 3-hydroxyphe 99.9 3.7E-20 7.9E-25 183.5 21.7 154 7-167 7-163 (406)
16 PRK14995 methyl viologen resis 99.9 1.6E-19 3.4E-24 184.1 26.1 315 12-396 3-326 (495)
17 TIGR00893 2A0114 d-galactonate 99.9 3.7E-20 8.1E-25 180.6 19.6 266 31-396 11-282 (399)
18 TIGR00903 2A0129 major facilit 99.8 6.1E-20 1.3E-24 180.1 20.5 243 31-395 8-253 (368)
19 TIGR00887 2A0109 phosphate:H+ 99.8 7.7E-20 1.7E-24 186.7 21.2 189 13-202 14-233 (502)
20 TIGR00895 2A0115 benzoate tran 99.8 3.4E-20 7.4E-25 181.8 16.6 182 10-198 12-197 (398)
21 PRK11273 glpT sn-glycerol-3-ph 99.8 5.7E-20 1.2E-24 185.2 18.1 285 12-394 26-318 (452)
22 PRK03699 putative transporter; 99.8 2.1E-19 4.6E-24 177.7 20.8 264 11-396 3-272 (394)
23 TIGR00881 2A0104 phosphoglycer 99.8 7.1E-20 1.5E-24 178.2 16.9 265 30-395 11-282 (379)
24 PRK10213 nepI ribonucleoside t 99.8 6.2E-19 1.3E-23 174.6 23.6 157 5-168 10-169 (394)
25 TIGR01299 synapt_SV2 synaptic 99.8 1.5E-19 3.3E-24 189.9 19.6 185 11-202 163-363 (742)
26 TIGR00886 2A0108 nitrite extru 99.8 2.5E-19 5.5E-24 174.5 19.9 269 29-396 16-292 (366)
27 PRK10406 alpha-ketoglutarate t 99.8 4.1E-19 8.8E-24 177.9 21.5 281 9-396 16-310 (432)
28 TIGR00894 2A0114euk Na(+)-depe 99.8 2E-19 4.4E-24 181.7 17.9 252 43-396 70-328 (465)
29 TIGR00711 efflux_EmrB drug res 99.8 7.6E-19 1.7E-23 177.9 21.6 296 32-396 20-322 (485)
30 TIGR00879 SP MFS transporter, 99.8 3.9E-19 8.4E-24 178.2 18.3 163 33-199 47-222 (481)
31 TIGR00712 glpT glycerol-3-phos 99.8 6.2E-19 1.3E-23 176.9 19.6 286 13-396 25-318 (438)
32 TIGR00898 2A0119 cation transp 99.8 1.4E-19 2.9E-24 184.7 13.8 163 30-202 105-272 (505)
33 TIGR00710 efflux_Bcr_CflA drug 99.8 2E-18 4.2E-23 169.2 21.5 246 32-396 23-273 (385)
34 TIGR00896 CynX cyanate transpo 99.8 1.3E-18 2.9E-23 169.4 19.5 243 31-395 17-262 (355)
35 PRK15034 nitrate/nitrite trans 99.8 1.6E-18 3.6E-23 172.8 20.3 279 14-396 33-317 (462)
36 PRK10642 proline/glycine betai 99.8 1.6E-18 3.5E-23 176.5 19.9 143 14-163 15-174 (490)
37 COG2223 NarK Nitrate/nitrite t 99.8 6.8E-19 1.5E-23 168.9 15.5 272 10-397 9-286 (417)
38 PRK10504 putative transporter; 99.8 1.6E-17 3.4E-22 168.1 25.2 153 31-190 27-181 (471)
39 PRK10077 xylE D-xylose transpo 99.8 3.7E-18 7.9E-23 172.8 19.9 166 34-199 32-220 (479)
40 PRK10091 MFS transport protein 99.8 7.3E-18 1.6E-22 166.1 21.1 131 31-168 20-152 (382)
41 COG2814 AraJ Arabinose efflux 99.8 2.2E-17 4.8E-22 159.8 23.4 267 7-396 5-277 (394)
42 KOG0569 Permease of the major 99.8 3.5E-17 7.6E-22 162.9 24.3 275 39-396 44-336 (485)
43 PRK11043 putative transporter; 99.8 1.5E-17 3.2E-22 164.7 21.2 242 32-396 24-269 (401)
44 TIGR00885 fucP L-fucose:H+ sym 99.8 2E-17 4.3E-22 164.7 21.9 277 25-396 13-300 (410)
45 PRK10473 multidrug efflux syst 99.8 2.5E-17 5.4E-22 162.6 21.6 130 31-167 20-151 (392)
46 TIGR00897 2A0118 polyol permea 99.8 3.4E-17 7.3E-22 162.5 22.2 249 36-396 35-288 (402)
47 PRK03893 putative sialic acid 99.8 9E-17 1.9E-21 163.5 25.7 180 11-197 16-198 (496)
48 PRK15402 multidrug efflux syst 99.8 2.2E-17 4.8E-22 163.8 20.3 129 33-168 32-162 (406)
49 PRK10133 L-fucose transporter; 99.8 4.6E-17 1E-21 163.4 22.7 149 14-166 25-176 (438)
50 TIGR00900 2A0121 H+ Antiporter 99.8 1.4E-17 3.1E-22 161.3 18.1 132 35-168 20-153 (365)
51 PRK15075 citrate-proton sympor 99.8 4.5E-17 9.7E-22 163.3 19.8 146 12-164 12-174 (434)
52 PF07690 MFS_1: Major Facilita 99.8 1.1E-17 2.3E-22 161.5 14.3 129 33-168 15-146 (352)
53 PRK11102 bicyclomycin/multidru 99.8 5.7E-17 1.2E-21 158.8 19.2 129 32-167 9-139 (377)
54 PRK09952 shikimate transporter 99.7 9.6E-17 2.1E-21 161.1 20.8 146 12-165 19-183 (438)
55 PRK03633 putative MFS family t 99.7 1.4E-16 3.1E-21 156.8 20.4 129 32-167 24-154 (381)
56 KOG2532 Permease of the major 99.7 4.2E-17 9.1E-22 163.5 16.6 253 41-395 65-324 (466)
57 PRK12382 putative transporter; 99.7 2.6E-16 5.7E-21 155.3 21.9 164 4-167 3-172 (392)
58 PRK05122 major facilitator sup 99.7 3.1E-16 6.7E-21 155.1 21.7 131 38-168 40-173 (399)
59 TIGR00901 2A0125 AmpG-related 99.7 2.1E-15 4.6E-20 146.8 20.4 129 34-167 8-143 (356)
60 TIGR00899 2A0120 sugar efflux 99.7 2.8E-15 6.1E-20 146.4 20.5 124 38-168 22-150 (375)
61 PRK15403 multidrug efflux syst 99.7 3.4E-15 7.4E-20 148.8 21.4 130 31-167 33-164 (413)
62 PRK11652 emrD multidrug resist 99.7 4.6E-15 9.9E-20 146.6 22.0 130 31-167 25-156 (394)
63 PRK10054 putative transporter; 99.7 1.5E-15 3.3E-20 150.4 17.6 151 8-167 4-156 (395)
64 TIGR00883 2A0106 metabolite-pr 99.7 1.9E-15 4.1E-20 147.8 17.8 128 31-165 10-154 (394)
65 KOG0254 Predicted transporter 99.7 3.8E-15 8.2E-20 152.6 20.3 263 49-396 89-360 (513)
66 TIGR00805 oat sodium-independe 99.6 2.2E-16 4.8E-21 165.0 8.7 134 34-167 53-232 (633)
67 PRK10489 enterobactin exporter 99.6 3.7E-15 8.1E-20 148.4 17.0 133 34-168 37-171 (417)
68 PRK09874 drug efflux system pr 99.6 1E-14 2.2E-19 144.2 19.8 129 32-168 32-167 (408)
69 cd06174 MFS The Major Facilita 99.6 1.5E-14 3.2E-19 138.9 20.3 132 30-168 15-148 (352)
70 PRK11646 multidrug resistance 99.6 1.4E-14 3.1E-19 143.7 20.8 147 12-167 11-159 (400)
71 PRK11010 ampG muropeptide tran 99.6 2.2E-14 4.9E-19 146.1 20.4 130 34-168 32-168 (491)
72 PRK11195 lysophospholipid tran 99.6 3.2E-14 6.9E-19 140.9 19.8 124 35-168 24-149 (393)
73 KOG1330 Sugar transporter/spin 99.6 2E-15 4.3E-20 146.4 10.4 146 13-165 31-179 (493)
74 COG0738 FucP Fucose permease [ 99.6 1E-13 2.3E-18 132.7 21.6 274 25-396 23-303 (422)
75 TIGR00902 2A0127 phenyl propri 99.6 6.7E-14 1.5E-18 137.9 20.5 239 36-396 26-271 (382)
76 PRK11128 putative 3-phenylprop 99.6 6.3E-14 1.4E-18 138.0 20.0 239 36-396 26-271 (382)
77 PRK11902 ampG muropeptide tran 99.6 7.8E-14 1.7E-18 138.4 20.1 136 27-167 11-154 (402)
78 TIGR00806 rfc RFC reduced fola 99.6 3.5E-14 7.6E-19 140.1 16.8 162 29-199 41-208 (511)
79 PRK09528 lacY galactoside perm 99.6 4.7E-14 1E-18 140.7 17.8 149 12-167 11-165 (420)
80 KOG2533 Permease of the major 99.6 5.6E-14 1.2E-18 141.6 18.4 253 40-392 72-336 (495)
81 PRK08633 2-acyl-glycerophospho 99.6 1E-13 2.2E-18 154.9 19.2 129 35-167 31-163 (1146)
82 PF00083 Sugar_tr: Sugar (and 99.5 2.5E-17 5.4E-22 165.5 -10.5 154 50-207 47-205 (451)
83 PRK10207 dipeptide/tripeptide 99.5 5.5E-12 1.2E-16 128.3 27.6 179 12-196 11-196 (489)
84 PRK06814 acylglycerophosphoeth 99.5 2E-13 4.3E-18 152.6 17.9 242 40-395 42-291 (1140)
85 KOG2563 Permease of the major 99.5 3.9E-13 8.4E-18 130.2 17.3 288 8-396 38-332 (480)
86 TIGR00882 2A0105 oligosacchari 99.5 1.3E-12 2.9E-17 129.2 21.0 127 39-166 28-156 (396)
87 PRK15011 sugar efflux transpor 99.5 2.6E-12 5.5E-17 127.2 21.8 146 13-168 17-168 (393)
88 TIGR00889 2A0110 nucleoside tr 99.5 8.1E-13 1.8E-17 131.9 18.2 82 35-123 24-107 (418)
89 KOG0255 Synaptic vesicle trans 99.5 1.3E-12 2.8E-17 134.1 15.7 152 42-203 111-264 (521)
90 COG2807 CynX Cyanate permease 99.4 1.2E-11 2.5E-16 117.1 19.2 244 30-396 28-274 (395)
91 KOG0252 Inorganic phosphate tr 99.4 4.4E-12 9.5E-17 123.0 14.1 167 31-197 58-249 (538)
92 PF06609 TRI12: Fungal trichot 99.4 7.7E-11 1.7E-15 120.6 23.4 156 34-198 64-222 (599)
93 PRK10642 proline/glycine betai 99.4 3.1E-11 6.8E-16 123.0 18.5 170 29-202 265-438 (490)
94 KOG0253 Synaptic vesicle trans 99.4 1.4E-11 3.1E-16 116.3 14.1 185 12-205 75-262 (528)
95 TIGR00792 gph sugar (Glycoside 99.3 1.8E-11 3.8E-16 122.4 15.0 129 36-165 22-158 (437)
96 TIGR00924 yjdL_sub1_fam amino 99.3 1.2E-10 2.7E-15 118.2 19.8 157 31-194 27-192 (475)
97 PRK09584 tppB putative tripept 99.3 9.6E-11 2.1E-15 119.7 18.8 156 30-191 37-198 (500)
98 TIGR02718 sider_RhtX_FptX side 99.3 4E-10 8.7E-15 111.2 20.6 255 25-396 11-275 (390)
99 KOG3764 Vesicular amine transp 99.3 1.6E-11 3.6E-16 117.1 9.0 149 43-198 100-252 (464)
100 PRK15462 dipeptide/tripeptide 99.2 4.7E-10 1E-14 113.4 19.5 176 13-194 7-189 (493)
101 PRK15011 sugar efflux transpor 99.2 3.8E-10 8.2E-15 111.7 17.9 157 32-195 234-392 (393)
102 TIGR00880 2_A_01_02 Multidrug 99.1 1.2E-09 2.6E-14 90.3 13.9 125 60-191 9-135 (141)
103 TIGR00899 2A0120 sugar efflux 99.1 2.6E-09 5.6E-14 104.2 18.0 148 40-194 226-374 (375)
104 PRK11551 putative 3-hydroxyphe 99.1 2.4E-09 5.2E-14 106.0 16.3 158 31-195 237-397 (406)
105 TIGR01299 synapt_SV2 synaptic 99.1 2.6E-09 5.6E-14 113.1 16.3 131 57-195 603-735 (742)
106 TIGR00889 2A0110 nucleoside tr 99.1 3.1E-09 6.8E-14 106.1 16.0 162 35-199 229-408 (418)
107 PRK09556 uhpT sugar phosphate 99.1 2.4E-09 5.3E-14 108.4 15.0 159 31-194 275-449 (467)
108 cd06174 MFS The Major Facilita 99.1 4.1E-09 8.9E-14 101.0 15.4 154 32-192 193-350 (352)
109 TIGR00897 2A0118 polyol permea 99.1 7.4E-09 1.6E-13 102.7 17.7 162 30-194 238-401 (402)
110 PRK09528 lacY galactoside perm 99.0 2.7E-09 5.9E-14 106.4 14.2 149 44-199 257-409 (420)
111 TIGR00890 2A0111 Oxalate/Forma 99.0 6E-09 1.3E-13 101.1 14.8 143 36-183 227-371 (377)
112 PRK05122 major facilitator sup 99.0 7.1E-09 1.5E-13 102.5 15.4 156 35-199 237-394 (399)
113 PRK09669 putative symporter Ya 99.0 6.8E-09 1.5E-13 104.4 15.3 124 38-162 34-165 (444)
114 PF13347 MFS_2: MFS/sugar tran 99.0 4.2E-09 9.2E-14 105.4 13.0 257 37-397 25-292 (428)
115 PRK10489 enterobactin exporter 99.0 1.5E-08 3.3E-13 100.8 16.1 158 34-198 243-404 (417)
116 PRK03545 putative arabinose tr 99.0 2.6E-08 5.7E-13 98.2 17.5 154 38-198 230-385 (390)
117 PRK10406 alpha-ketoglutarate t 99.0 3.1E-08 6.7E-13 99.3 17.7 166 30-199 259-429 (432)
118 PRK03699 putative transporter; 98.9 1.4E-08 3E-13 100.5 14.6 159 31-196 222-382 (394)
119 KOG2615 Permease of the major 98.9 3.9E-09 8.4E-14 100.6 10.0 133 28-168 42-181 (451)
120 PRK09952 shikimate transporter 98.9 4.4E-08 9.4E-13 98.5 18.3 162 31-195 267-434 (438)
121 TIGR00902 2A0127 phenyl propri 98.9 3.7E-08 7.9E-13 97.1 17.4 140 33-180 224-366 (382)
122 PF05977 MFS_3: Transmembrane 98.9 5.7E-08 1.2E-12 99.4 19.2 126 40-167 36-163 (524)
123 TIGR00879 SP MFS transporter, 98.9 2E-08 4.2E-13 100.6 14.6 165 32-197 302-474 (481)
124 PRK15402 multidrug efflux syst 98.9 9.1E-08 2E-12 94.9 18.4 163 32-196 233-398 (406)
125 TIGR00883 2A0106 metabolite-pr 98.9 2.9E-08 6.3E-13 96.9 14.5 137 30-169 235-375 (394)
126 TIGR01301 GPH_sucrose GPH fami 98.9 1.7E-07 3.7E-12 94.6 19.6 137 28-164 15-173 (477)
127 TIGR00710 efflux_Bcr_CflA drug 98.9 1.1E-07 2.4E-12 92.9 17.6 131 32-164 224-356 (385)
128 PRK10504 putative transporter; 98.9 8.6E-08 1.9E-12 97.0 16.9 130 35-168 282-414 (471)
129 PRK11010 ampG muropeptide tran 98.9 1.1E-07 2.4E-12 97.1 17.5 156 38-196 247-405 (491)
130 COG2814 AraJ Arabinose efflux 98.9 1.6E-07 3.4E-12 91.6 17.6 165 26-197 224-389 (394)
131 PRK15034 nitrate/nitrite trans 98.8 8.7E-08 1.9E-12 96.1 16.0 138 28-168 266-427 (462)
132 TIGR00892 2A0113 monocarboxyla 98.8 3.6E-08 7.9E-13 99.6 13.4 127 35-168 262-394 (455)
133 PRK12382 putative transporter; 98.8 4.9E-08 1.1E-12 96.3 13.8 148 35-191 237-386 (392)
134 PRK12307 putative sialic acid 98.8 1.2E-07 2.6E-12 94.5 16.6 135 31-170 248-384 (426)
135 PRK09874 drug efflux system pr 98.8 1.1E-07 2.4E-12 93.9 16.1 128 58-192 267-396 (408)
136 TIGR00887 2A0109 phosphate:H+ 98.8 7.8E-08 1.7E-12 98.4 15.1 136 30-169 304-454 (502)
137 PRK09705 cynX putative cyanate 98.8 1.8E-07 3.8E-12 92.7 17.0 153 31-191 222-378 (393)
138 PRK10429 melibiose:sodium symp 98.8 8.6E-08 1.9E-12 97.3 15.1 124 38-162 31-162 (473)
139 PRK11128 putative 3-phenylprop 98.8 2E-07 4.3E-12 91.8 17.0 131 35-172 226-358 (382)
140 PRK03633 putative MFS family t 98.8 1.6E-07 3.5E-12 92.4 16.3 141 36-186 222-364 (381)
141 PRK10077 xylE D-xylose transpo 98.8 1.6E-07 3.5E-12 95.0 16.7 129 35-166 292-423 (479)
142 TIGR00788 fbt folate/biopterin 98.8 4.4E-07 9.5E-12 92.1 19.4 155 35-195 47-210 (468)
143 COG2223 NarK Nitrate/nitrite t 98.8 3.4E-08 7.5E-13 95.6 10.3 141 25-169 229-375 (417)
144 PRK03893 putative sialic acid 98.8 1.8E-07 3.8E-12 95.3 15.8 135 34-174 295-433 (496)
145 TIGR01272 gluP glucose/galacto 98.8 1.3E-07 2.9E-12 90.6 13.8 194 106-396 8-209 (310)
146 PLN00028 nitrate transmembrane 98.7 8.9E-08 1.9E-12 97.3 12.8 157 35-199 273-438 (476)
147 KOG4686 Predicted sugar transp 98.7 9.1E-09 2E-13 94.4 4.3 130 25-158 52-187 (459)
148 TIGR00891 2A0112 putative sial 98.7 1.6E-07 3.5E-12 92.3 13.7 128 36-169 260-390 (405)
149 PRK15075 citrate-proton sympor 98.7 4.4E-07 9.5E-12 91.0 16.9 135 31-169 255-394 (434)
150 TIGR00900 2A0121 H+ Antiporter 98.7 1.9E-07 4E-12 90.3 13.7 128 35-168 232-362 (365)
151 PRK11273 glpT sn-glycerol-3-ph 98.7 2.5E-07 5.5E-12 93.3 15.2 165 30-199 269-440 (452)
152 PRK09848 glucuronide transport 98.7 2.8E-07 6.1E-12 92.8 15.3 119 37-155 32-158 (448)
153 TIGR00895 2A0115 benzoate tran 98.7 1.8E-07 3.9E-12 91.5 13.4 129 31-166 267-397 (398)
154 PRK14995 methyl viologen resis 98.7 2.4E-07 5.2E-12 94.6 14.6 133 32-168 277-412 (495)
155 TIGR00893 2A0114 d-galactonate 98.7 2.9E-07 6.3E-12 89.5 14.5 152 32-185 233-390 (399)
156 TIGR02718 sider_RhtX_FptX side 98.7 6.7E-07 1.5E-11 88.2 17.2 144 37-181 231-378 (390)
157 PRK10091 MFS transport protein 98.7 7E-07 1.5E-11 87.9 17.1 150 38-193 224-375 (382)
158 TIGR00711 efflux_EmrB drug res 98.7 2.7E-07 5.9E-12 93.4 13.3 131 35-168 276-409 (485)
159 PRK11043 putative transporter; 98.7 1.8E-06 3.9E-11 85.4 18.9 137 31-169 220-357 (401)
160 PRK11102 bicyclomycin/multidru 98.7 1.9E-06 4.2E-11 84.2 18.7 147 40-192 221-370 (377)
161 PRK10213 nepI ribonucleoside t 98.7 1.4E-06 3E-11 86.3 17.8 134 37-178 240-375 (394)
162 KOG0569 Permease of the major 98.7 1.4E-06 3E-11 87.5 17.7 169 26-197 283-458 (485)
163 PF03825 Nuc_H_symport: Nucleo 98.6 5.7E-06 1.2E-10 82.1 20.8 59 37-95 25-85 (400)
164 PF01306 LacY_symp: LacY proto 98.6 7.4E-07 1.6E-11 87.7 14.2 123 39-167 33-162 (412)
165 PF05977 MFS_3: Transmembrane 98.6 1.6E-06 3.4E-11 88.9 17.0 149 37-192 241-392 (524)
166 PRK11663 regulatory protein Uh 98.6 1.1E-06 2.4E-11 88.2 14.7 147 32-183 261-413 (434)
167 TIGR00882 2A0105 oligosacchari 98.6 1.2E-06 2.6E-11 86.6 14.8 140 45-191 250-393 (396)
168 TIGR01272 gluP glucose/galacto 98.6 1.4E-06 3.1E-11 83.4 14.6 118 43-169 172-290 (310)
169 PRK11462 putative transporter; 98.6 3.9E-06 8.4E-11 85.0 18.2 123 40-163 36-166 (460)
170 PF11700 ATG22: Vacuole efflux 98.5 2.6E-06 5.7E-11 86.3 16.3 158 37-194 305-468 (477)
171 PRK10054 putative transporter; 98.5 3.3E-06 7.1E-11 83.7 16.7 150 43-199 238-390 (395)
172 PRK11902 ampG muropeptide tran 98.5 4.1E-06 8.9E-11 83.1 17.1 147 38-190 234-386 (402)
173 PF11700 ATG22: Vacuole efflux 98.5 1.7E-05 3.7E-10 80.4 20.9 73 323-395 272-347 (477)
174 PRK11652 emrD multidrug resist 98.5 8.1E-06 1.8E-10 80.5 18.0 127 40-170 234-361 (394)
175 PRK08633 2-acyl-glycerophospho 98.5 2.6E-06 5.6E-11 95.7 16.1 121 39-166 258-381 (1146)
176 COG2270 Permeases of the major 98.5 2.9E-06 6.3E-11 82.5 14.1 150 40-196 279-431 (438)
177 TIGR00901 2A0125 AmpG-related 98.5 2.3E-06 4.9E-11 83.2 13.7 119 35-153 230-355 (356)
178 PF03825 Nuc_H_symport: Nucleo 98.5 6.7E-06 1.5E-10 81.6 16.9 151 40-196 233-398 (400)
179 TIGR00894 2A0114euk Na(+)-depe 98.5 2.8E-06 6.1E-11 85.9 14.4 159 31-193 278-449 (465)
180 COG3104 PTR2 Dipeptide/tripept 98.5 1.2E-06 2.6E-11 86.9 11.1 154 37-195 45-207 (498)
181 PRK10133 L-fucose transporter; 98.5 4.7E-06 1E-10 83.8 15.8 120 41-169 287-407 (438)
182 PF05631 DUF791: Protein of un 98.5 3.8E-06 8.2E-11 80.4 14.1 80 42-129 62-142 (354)
183 TIGR00898 2A0119 cation transp 98.5 2.4E-06 5.2E-11 87.3 13.7 126 64-196 371-497 (505)
184 TIGR00712 glpT glycerol-3-phos 98.5 2.8E-06 6E-11 85.3 14.0 144 31-176 268-415 (438)
185 TIGR00896 CynX cyanate transpo 98.4 3.3E-06 7.2E-11 82.0 13.9 130 31-168 214-347 (355)
186 PRK10473 multidrug efflux syst 98.4 2.1E-05 4.5E-10 77.6 18.9 118 40-166 230-350 (392)
187 TIGR00792 gph sugar (Glycoside 98.4 4.8E-06 1E-10 83.2 13.9 146 47-198 255-422 (437)
188 PRK11195 lysophospholipid tran 98.4 1.3E-05 2.7E-10 79.5 16.6 121 40-168 232-355 (393)
189 TIGR00903 2A0129 major facilit 98.3 2.6E-05 5.6E-10 76.7 16.6 151 29-191 207-362 (368)
190 TIGR02332 HpaX 4-hydroxyphenyl 98.3 5.7E-06 1.2E-10 82.5 12.1 134 29-169 257-395 (412)
191 PRK11646 multidrug resistance 98.3 1E-05 2.3E-10 80.3 13.8 128 35-169 229-359 (400)
192 PF07690 MFS_1: Major Facilita 98.3 4.3E-06 9.3E-11 80.4 10.2 125 32-160 224-352 (352)
193 PF03137 OATP: Organic Anion T 98.3 1.4E-07 3.1E-12 96.8 -0.2 297 35-395 24-372 (539)
194 PF01306 LacY_symp: LacY proto 98.3 4.9E-06 1.1E-10 82.0 10.3 130 64-200 275-407 (412)
195 PRK06814 acylglycerophosphoeth 98.3 1.5E-05 3.2E-10 89.7 15.5 133 36-168 247-395 (1140)
196 TIGR00886 2A0108 nitrite extru 98.3 3.7E-06 8E-11 81.7 9.4 121 32-155 243-365 (366)
197 PRK09848 glucuronide transport 98.2 1.4E-05 3.1E-10 80.4 13.1 153 41-198 256-429 (448)
198 TIGR00881 2A0104 phosphoglycer 98.2 1.2E-05 2.5E-10 78.0 11.8 132 33-169 235-372 (379)
199 KOG4686 Predicted sugar transp 98.1 5.9E-05 1.3E-09 69.8 13.7 148 12-171 265-416 (459)
200 KOG2325 Predicted transporter/ 98.1 8.9E-05 1.9E-09 74.3 15.2 188 9-200 28-236 (488)
201 KOG0253 Synaptic vesicle trans 98.1 3.7E-06 8.1E-11 80.2 5.1 127 64-199 397-524 (528)
202 PF13347 MFS_2: MFS/sugar tran 98.1 5E-05 1.1E-09 76.0 13.4 151 41-197 253-425 (428)
203 KOG0254 Predicted transporter 98.1 0.00011 2.4E-09 75.5 15.6 169 26-197 308-487 (513)
204 PRK15403 multidrug efflux syst 98.0 0.00025 5.5E-09 70.7 17.5 166 30-199 234-404 (413)
205 KOG2504 Monocarboxylate transp 98.0 5.5E-05 1.2E-09 77.3 11.0 156 32-194 316-476 (509)
206 PRK10207 dipeptide/tripeptide 97.9 7.4E-05 1.6E-09 76.3 11.8 107 60-166 320-438 (489)
207 PF03209 PUCC: PUCC protein; 97.9 0.00077 1.7E-08 65.8 18.0 130 40-169 6-151 (403)
208 COG2270 Permeases of the major 97.9 0.00016 3.4E-09 70.6 13.1 249 55-396 65-319 (438)
209 TIGR00788 fbt folate/biopterin 97.9 6.7E-05 1.5E-09 76.2 10.7 154 42-195 281-447 (468)
210 COG2271 UhpC Sugar phosphate p 97.9 0.00013 2.8E-09 71.2 11.8 138 30-172 268-412 (448)
211 COG2211 MelB Na+/melibiose sym 97.9 0.00032 6.9E-09 70.1 14.1 125 40-165 39-171 (467)
212 PF01770 Folate_carrier: Reduc 97.9 0.0011 2.4E-08 65.3 17.6 158 34-199 24-187 (412)
213 PRK09669 putative symporter Ya 97.9 0.00033 7.1E-09 70.5 14.5 140 54-198 269-430 (444)
214 PRK10429 melibiose:sodium symp 97.8 0.00055 1.2E-08 69.6 14.9 119 47-167 264-391 (473)
215 PRK09584 tppB putative tripept 97.7 0.0006 1.3E-08 69.8 14.3 100 65-164 337-439 (500)
216 COG0477 ProP Permeases of the 97.6 0.0014 3E-08 60.3 14.3 125 35-164 23-153 (338)
217 TIGR00885 fucP L-fucose:H+ sym 97.6 0.0016 3.5E-08 64.9 15.1 95 65-168 286-380 (410)
218 TIGR00924 yjdL_sub1_fam amino 97.6 0.001 2.2E-08 67.8 13.7 126 68-193 336-468 (475)
219 COG2807 CynX Cyanate permease 97.6 0.003 6.6E-08 60.7 15.1 139 28-174 222-365 (395)
220 PF03092 BT1: BT1 family; Int 97.5 0.0014 3.1E-08 65.8 12.8 158 35-195 11-177 (433)
221 KOG0252 Inorganic phosphate tr 97.5 0.00019 4.1E-09 70.7 5.9 181 16-199 305-503 (538)
222 TIGR00926 2A1704 Peptide:H+ sy 97.4 0.0028 6.1E-08 66.8 14.6 155 35-189 9-177 (654)
223 PF00083 Sugar_tr: Sugar (and 97.4 2.1E-06 4.6E-11 86.2 -9.3 164 33-199 272-442 (451)
224 PRK11462 putative transporter; 97.3 0.0097 2.1E-07 60.3 16.5 108 52-164 266-382 (460)
225 PF05978 UNC-93: Ion channel r 97.3 0.0038 8.2E-08 53.4 10.8 98 60-165 49-147 (156)
226 COG2211 MelB Na+/melibiose sym 97.2 0.0038 8.2E-08 62.6 12.3 119 44-167 267-394 (467)
227 PF06779 DUF1228: Protein of u 97.2 0.0019 4.1E-08 49.1 7.0 69 30-98 8-77 (85)
228 COG0738 FucP Fucose permease [ 97.1 0.014 3.1E-07 56.9 14.1 139 26-173 248-388 (422)
229 KOG2532 Permease of the major 97.1 0.0051 1.1E-07 62.3 11.5 158 30-193 274-446 (466)
230 KOG2533 Permease of the major 97.1 0.003 6.6E-08 64.2 9.8 135 28-169 287-430 (495)
231 KOG3762 Predicted transporter 96.9 0.003 6.6E-08 63.5 8.2 116 65-187 423-541 (618)
232 KOG3626 Organic anion transpor 96.9 0.0044 9.6E-08 65.0 9.5 131 35-165 118-295 (735)
233 KOG0255 Synaptic vesicle trans 96.8 0.053 1.1E-06 55.7 16.6 132 65-201 367-500 (521)
234 TIGR00769 AAA ADP/ATP carrier 96.7 0.39 8.5E-06 48.7 21.5 151 14-167 6-189 (472)
235 TIGR01301 GPH_sucrose GPH fami 96.7 0.058 1.3E-06 54.8 15.3 134 65-198 322-476 (477)
236 PF12832 MFS_1_like: MFS_1 lik 96.6 0.0071 1.5E-07 45.2 6.2 53 36-88 22-75 (77)
237 KOG2816 Predicted transporter 96.5 0.01 2.3E-07 59.9 8.7 125 63-197 77-203 (463)
238 PF06609 TRI12: Fungal trichot 96.3 0.017 3.7E-07 59.9 8.9 148 17-169 312-467 (599)
239 KOG2816 Predicted transporter 96.2 0.049 1.1E-06 55.1 11.6 121 40-168 268-391 (463)
240 KOG3764 Vesicular amine transp 96.2 0.026 5.6E-07 55.1 8.7 128 40-174 297-434 (464)
241 PRK15462 dipeptide/tripeptide 96.1 0.11 2.4E-06 53.0 13.8 116 51-166 310-437 (493)
242 PF03209 PUCC: PUCC protein; 96.0 0.12 2.6E-06 50.7 12.8 122 41-166 236-360 (403)
243 PF06963 FPN1: Ferroportin1 (F 94.9 2.5 5.4E-05 42.4 17.9 72 324-396 251-324 (432)
244 KOG4332 Predicted sugar transp 94.5 0.032 6.9E-07 51.7 3.2 96 42-145 65-161 (454)
245 PF06963 FPN1: Ferroportin1 (F 94.4 1.1 2.3E-05 45.0 14.0 127 32-158 276-407 (432)
246 PF02487 CLN3: CLN3 protein; 94.3 0.54 1.2E-05 46.5 11.5 122 65-197 76-199 (402)
247 KOG3098 Uncharacterized conser 93.0 0.23 5E-06 49.9 6.5 99 57-163 59-158 (461)
248 KOG3098 Uncharacterized conser 93.0 3 6.5E-05 42.1 14.3 107 55-161 285-406 (461)
249 PTZ00207 hypothetical protein; 93.0 1.8 3.9E-05 45.3 13.1 124 38-168 377-513 (591)
250 PRK03612 spermidine synthase; 92.9 4.2 9.2E-05 41.9 15.8 33 40-72 41-74 (521)
251 KOG2615 Permease of the major 92.7 0.33 7.2E-06 47.4 6.8 119 42-167 290-412 (451)
252 PF00854 PTR2: POT family; In 92.7 0.53 1.2E-05 46.1 8.7 117 79-195 2-124 (372)
253 PF12832 MFS_1_like: MFS_1 lik 91.5 0.2 4.4E-06 37.3 3.1 47 351-397 19-67 (77)
254 TIGR00939 2a57 Equilibrative N 90.9 5.6 0.00012 40.1 13.6 93 65-161 62-155 (437)
255 TIGR00805 oat sodium-independe 90.8 0.75 1.6E-05 48.6 7.7 66 29-94 345-415 (633)
256 PF03092 BT1: BT1 family; Int 90.0 0.91 2E-05 45.6 7.2 152 44-197 250-416 (433)
257 KOG0637 Sucrose transporter an 89.8 0.89 1.9E-05 45.4 6.7 136 28-163 43-199 (498)
258 KOG2563 Permease of the major 87.4 1.1 2.4E-05 44.6 5.6 138 28-168 280-420 (480)
259 KOG3762 Predicted transporter 84.7 1.3 2.8E-05 45.2 4.6 57 37-93 34-91 (618)
260 COG3104 PTR2 Dipeptide/tripept 84.5 15 0.00033 37.3 12.0 130 32-164 306-451 (498)
261 PF13000 Acatn: Acetyl-coenzym 83.1 59 0.0013 33.3 15.3 48 37-84 23-76 (544)
262 PF02487 CLN3: CLN3 protein; 73.1 23 0.0005 35.2 9.1 59 106-164 333-392 (402)
263 KOG3574 Acetyl-CoA transporter 70.6 94 0.002 30.9 12.3 172 26-199 42-242 (510)
264 KOG1237 H+/oligopeptide sympor 69.3 84 0.0018 32.9 12.7 104 35-138 59-182 (571)
265 KOG2325 Predicted transporter/ 66.4 8.2 0.00018 39.2 4.5 187 14-200 261-483 (488)
266 PF05631 DUF791: Protein of un 61.8 8.1 0.00018 37.5 3.3 42 357-398 59-102 (354)
267 PF01733 Nucleoside_tran: Nucl 55.8 3.8 8.3E-05 39.1 0.0 20 369-388 186-205 (309)
268 TIGR00806 rfc RFC reduced fola 53.9 47 0.001 34.0 7.3 87 59-150 309-396 (511)
269 KOG3626 Organic anion transpor 52.6 42 0.0009 36.0 7.0 63 31-93 409-476 (735)
270 KOG3880 Predicted small molecu 48.0 34 0.00073 32.9 4.9 125 65-200 79-206 (409)
271 PF01770 Folate_carrier: Reduc 46.4 1.1E+02 0.0023 30.7 8.4 85 60-149 297-382 (412)
272 KOG1330 Sugar transporter/spin 44.2 59 0.0013 32.9 6.2 41 34-74 268-309 (493)
273 COG4262 Predicted spermidine s 42.8 3.4E+02 0.0075 26.8 11.9 59 107-166 104-162 (508)
274 KOG0637 Sucrose transporter an 42.1 37 0.0008 34.3 4.4 37 61-97 345-381 (498)
275 PF11299 DUF3100: Protein of u 41.8 40 0.00086 30.7 4.2 91 66-160 125-223 (241)
276 PRK10692 hypothetical protein; 40.3 88 0.0019 23.7 5.1 19 77-95 3-21 (92)
277 PF10762 DUF2583: Protein of u 38.8 76 0.0016 23.9 4.5 19 77-95 3-21 (89)
278 COG5336 Uncharacterized protei 38.1 65 0.0014 25.5 4.3 23 61-83 55-78 (116)
279 TIGR00880 2_A_01_02 Multidrug 37.2 1.7E+02 0.0036 22.6 7.1 35 56-90 94-129 (141)
280 TIGR02230 ATPase_gene1 F0F1-AT 36.8 1E+02 0.0022 24.2 5.2 24 63-86 57-81 (100)
281 KOG1479 Nucleoside transporter 36.0 4.6E+02 0.0099 26.2 14.0 87 108-197 117-207 (406)
282 KOG3097 Predicted membrane pro 33.5 1.3E+02 0.0029 29.2 6.4 35 361-395 306-340 (390)
283 KOG3810 Micronutrient transpor 33.4 91 0.002 30.6 5.4 84 59-149 282-368 (433)
284 PF06813 Nodulin-like: Nodulin 33.1 52 0.0011 30.4 3.7 51 345-396 15-67 (250)
285 PF11947 DUF3464: Protein of u 29.4 1.1E+02 0.0023 26.1 4.6 83 70-155 56-142 (153)
286 KOG3810 Micronutrient transpor 27.7 49 0.0011 32.4 2.5 150 42-199 34-188 (433)
287 PF03137 OATP: Organic Anion T 25.3 24 0.00051 36.7 0.0 63 31-93 322-389 (539)
288 TIGR00939 2a57 Equilibrative N 25.0 2.7E+02 0.0059 28.0 7.5 55 108-162 372-427 (437)
289 PF10225 DUF2215: Uncharacteri 24.9 5.5E+02 0.012 23.6 10.2 56 106-164 32-87 (249)
290 PF03547 Mem_trans: Membrane t 24.9 6.4E+02 0.014 24.4 15.4 23 324-346 237-259 (385)
291 TIGR00926 2A1704 Peptide:H+ sy 24.4 2.8E+02 0.0062 29.5 7.9 74 115-188 572-646 (654)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-43 Score=358.08 Aligned_cols=367 Identities=22% Similarity=0.281 Sum_probs=283.8
Q ss_pred CCCCcHHHHHHHHHHHHHhcccccccccHHHHHHHcCCChhhHHHHHHHHHhhhhhhhhhhhhhcccCchHHHHHHHHHH
Q 015916 9 SSAGKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRIPAPIILLIGSLEG 88 (398)
Q Consensus 9 ~~~~~w~~l~~~~~~~~~~g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (398)
...+||..++++++++.+.|..|.|+++.+++++++|+|++|++++...+...+.+++++|++.||+|+|+++.+|.+++
T Consensus 22 ~e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~ 101 (591)
T PTZ00207 22 NEPRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVF 101 (591)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34689999999999999999999999999999999999999999976654444455778999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 89 LVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 89 ~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
++|++++++++.+.+. .+++++++++++.|+|.+..++++..++.+|||++||+++|+..++.++|+++++++...++.
T Consensus 102 ~iG~ll~ala~~~~i~-~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 102 CLGTLLFALTFQEVIE-GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHhccccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987544332 468999999999999999888889999999999999999999999999999999999998887
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhcccccCCCCCC--c--hhhhhh-----------------hhHHHHHHHHHHHHHHHH
Q 015916 169 DDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTV--D--EEKEEA-----------------KYFSIINTVAIVVALYLQ 227 (398)
Q Consensus 169 ~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~--~--~~~~~~-----------------~~~~~~~~~~~~~~~~~~ 227 (398)
++.+.+++++++++.++++++.+++|++|+.... + .++++. +++.+.+..++++++|++
T Consensus 181 ~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~ 260 (591)
T PTZ00207 181 DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLP 260 (591)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHH
Confidence 7677889999999999999999999988854321 0 012222 277788888899999999
Q ss_pred HHhhccCCccch---hHHHHHHHH-HHHHhh-hhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhc
Q 015916 228 VYDFLPNKSETL---ALIFSGILI-ILLASP-VAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVED 302 (398)
Q Consensus 228 ~~~~~~~~~~~~---~~~~~~~~~-~~l~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 302 (398)
++++++++++++ +..+.++++ +++..| +++|++. +++++++ +++|.|+++..++ +++. .+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~-~~~~~~~---~~~~~~~~~~~~~--~~~~-------~~~~ 327 (591)
T PTZ00207 261 LQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTT-FDGKRPH---DDSDGKAKEHVEA--GEEV-------SAAE 327 (591)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHH-hccCCcC---CCccccccccccc--cccc-------cccc
Confidence 999999988875 566666665 677888 7888754 2222111 1111111000000 0000 0000
Q ss_pred ch--hhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccceeeeeechHHHHHHh-CC-Cch--hH-HHHHHH
Q 015916 303 TV--VAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLAL-GY-VDV--SI-FVSLTS 375 (398)
Q Consensus 303 ~~--~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~~-g~-~~~--a~-~vsl~s 375 (398)
.+ +++ ++ ...|+.++ |.+|.+++.|||++|++++|+.|.+++++||++||.+++ |+ ++. +. +++++|
T Consensus 328 ~~~~~~~--~~--~~~P~~~~--t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~s 401 (591)
T PTZ00207 328 DKVVETD--VD--YIAPQFQE--TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNG 401 (591)
T ss_pred ccccccc--cc--CCCCCCcc--hHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhh
Confidence 00 000 10 12244443 999999999999999999999999999999999999999 87 333 33 899999
Q ss_pred HHHHHhhhhhhhhhHHHHhH
Q 015916 376 IWGFFGRIISGSVSEYFIKM 395 (398)
Q Consensus 376 i~~~~GRl~~G~lsD~~~~~ 395 (398)
++|++||++.|+++....+|
T Consensus 402 i~~~~GRl~~g~~~~~~~~~ 421 (591)
T PTZ00207 402 VGSAVGRLCMSYFEIWSQKR 421 (591)
T ss_pred HHHHhhHHHHHHHHHHHHhh
Confidence 99999999999998444433
No 2
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=100.00 E-value=3.2e-35 Score=269.35 Aligned_cols=246 Identities=50% Similarity=0.906 Sum_probs=229.1
Q ss_pred cHHHHHHHHHHHHHhcccccccccHHHHHHHcCCChhhHHHHHHHHHhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHH
Q 015916 13 KWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRIPAPIILLIGSLEGLVGY 92 (398)
Q Consensus 13 ~w~~l~~~~~~~~~~g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~ 92 (398)
||..++++++++.++|+.|.|+.|+|++|+.+|+|++|++.++++.++|..++++.|.+.||+|||.++.+|.+...+||
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChh
Q 015916 93 GAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPA 172 (398)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~ 172 (398)
..++.++.+.+++.++|+++++.++.|.|.+..++++..++.++||++||++.|+.++.+||++++++.++..+++++..
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~ 160 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPS 160 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChH
Confidence 99999999887656799999999999999998889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccch---hHHHHHHHHH
Q 015916 173 KFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETL---ALIFSGILII 249 (398)
Q Consensus 173 ~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 249 (398)
.|++++++.|.++++++.+++|+.|+.....++++|++++...+...++++.|++...+.+++.+.+ +.....++++
T Consensus 161 ~fll~la~~~~~v~l~~~~~vr~~~~~~~~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~~~~il~l 240 (250)
T PF06813_consen 161 SFLLFLAVLPAVVCLVAMFFVRPVPPSPSRTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKLSRAARVIFAVILLL 240 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhheeccCCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999998765545556788888888888999999999999999999887 5667777778
Q ss_pred HHHhhhhhc
Q 015916 250 LLASPVAIP 258 (398)
Q Consensus 250 ~l~~p~~~~ 258 (398)
++.+|+++|
T Consensus 241 lL~~Pl~i~ 249 (250)
T PF06813_consen 241 LLLLPLAIP 249 (250)
T ss_pred HHHhhhhcc
Confidence 889999877
No 3
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.93 E-value=1.5e-24 Score=210.90 Aligned_cols=269 Identities=22% Similarity=0.284 Sum_probs=197.8
Q ss_pred CcHHHHHHHHHHHHHhcccccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHH
Q 015916 12 GKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLV 90 (398)
Q Consensus 12 ~~w~~l~~~~~~~~~~g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~i 90 (398)
|+|+.+.+.+......+..|.++.+.|++++++|+|..+.+++.+...++... .++.|++.||+|||+++.++.++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~ 80 (377)
T TIGR00890 1 RWWYVLVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGL 80 (377)
T ss_pred CeEEEeHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHH
Confidence 45676776666677777788999999999999999999999987777788765 79999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCC
Q 015916 91 GYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADD 170 (398)
Q Consensus 91 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~ 170 (398)
+.+.+.+. ++++.+++.|++.|++.+..+......+.+|+|++||++.++...+.++|..+.+++...+.+.
T Consensus 81 ~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~- 152 (377)
T TIGR00890 81 GFTFYAIA-------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINL- 152 (377)
T ss_pred HHHHHHHH-------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhc-
Confidence 99887765 5788888899999999988877778889999999999999999999999998888777665432
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHH
Q 015916 171 PAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIIL 250 (398)
Q Consensus 171 ~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (398)
.+||..+...+.+.+.
T Consensus 153 -------------------------------------~~~~~~f~~~~~~~~~--------------------------- 168 (377)
T TIGR00890 153 -------------------------------------EGVPAAFIYMGIIFLL--------------------------- 168 (377)
T ss_pred -------------------------------------ccHHHHHHHHHHHHHH---------------------------
Confidence 3455433222110000
Q ss_pred HHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhc
Q 015916 251 LASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMW 330 (398)
Q Consensus 251 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~ 330 (398)
...+.... ++ +++.+ +.++ + ++ . ..++.+.++.+|
T Consensus 169 ~~~~~~~~----~~-----~~~~~-------~~~~---~---------------~~-------~----~~~~~~~~~~~~ 203 (377)
T TIGR00890 169 VIVLGAFL----IG-----YPPGQ-------LIKT---N---------------IE-------V----SVKDYTVWEMLR 203 (377)
T ss_pred HHHHHHHh----ee-----cCchh-------cccc---C---------------cc-------c----chhhhhHHHHHc
Confidence 00000000 11 01000 0000 0 00 0 001234578899
Q ss_pred cHhHHHHHHHHHhcccceeeeeechHHHHHHhCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHhc
Q 015916 331 TVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMVH 397 (398)
Q Consensus 331 t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~~ 397 (398)
++++|.+.+.+++.........+..+++.++.|.++ .....++.++.+.+++++.|+++||++||+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 272 (377)
T TIGR00890 204 TPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKT 272 (377)
T ss_pred CccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999988877766665556666777888888764 4568889999999999999999999999864
No 4
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.92 E-value=2.7e-24 Score=217.65 Aligned_cols=314 Identities=18% Similarity=0.142 Sum_probs=227.3
Q ss_pred CCCcHHHHHHHHHHHH-HhcccccccccHHHHHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcccCchHHHHHHHHH
Q 015916 10 SAGKWLGFVTAVWVQA-ISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPAPIILLIGSLE 87 (398)
Q Consensus 10 ~~~~w~~l~~~~~~~~-~~g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~~g~~~ 87 (398)
.-..|.+++++++.+. ..|..++++++.+.++++++-+.++++|+.+...... ..+|+.+.+.||||.|.++++|.++
T Consensus 41 GG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v 120 (509)
T KOG2504|consen 41 GGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLV 120 (509)
T ss_pred CCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHH
Confidence 3457999999999864 6788999999999999999999999999655544444 4589999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccCCchHHHHHH-HHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhH
Q 015916 88 GLVGYGAQWLVVSRKIQPLSYWQMCV-FLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSAL 166 (398)
Q Consensus 88 ~~ig~~~~~~~~~~~~~~~~~~~l~~-~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~ 166 (398)
.++|+++.+++ +++|++++ ++++.|+|.|+.|.++...+..||+|||++|.|+..++.|+|..+++++...+
T Consensus 121 ~~~g~~lssF~-------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l 193 (509)
T KOG2504|consen 121 AALGLLLSSFA-------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYL 193 (509)
T ss_pred HHHHHHHHHHH-------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHH
Confidence 99999999987 67888886 79999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHH
Q 015916 167 FADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGI 246 (398)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (398)
++.-+|++.+++-....+.++.+...+|+.+....+.++++.+... ...++.
T Consensus 194 ~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~-----------------~~~~~~----------- 245 (509)
T KOG2504|consen 194 LSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSA-----------------ASVEST----------- 245 (509)
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhcccc-----------------cccccc-----------
Confidence 9876676666555555677777777777655443321111111100 000000
Q ss_pred HHHHHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCC-CcCCcc--
Q 015916 247 LIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRP-VLGEDH-- 323 (398)
Q Consensus 247 ~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~-- 323 (398)
-. ...+... + ..++........ .+.. + +++ + +... ..+...
T Consensus 246 ----------------~~-~~~~~~~------~--~~~~~~~~~~~~-~~~~-~----~~~---~--~~~~~~~~~~~~~ 289 (509)
T KOG2504|consen 246 ----------------PK-PVELRIS------E--RDSGLKKLSLSN-LATL-K----RGP---D--KWRNSPLQAFLSM 289 (509)
T ss_pred ----------------cc-ccccccc------c--CCCCCCcccccc-hhhh-h----hCC---c--cccccchhhhhhh
Confidence 00 0000000 0 000000000000 0000 0 000 0 0000 011111
Q ss_pred hHHHHhccHhHHHHHHHHHhcccceeeeeechHHHHHHhCCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHh
Q 015916 324 TIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (398)
Q Consensus 324 t~~~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~ 394 (398)
--++++|++.|+.+.+...+...........++.+.++.|++ +++.++++.++.+.+||++.|++.|+...
T Consensus 290 ~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~ 362 (509)
T KOG2504|consen 290 LDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGI 362 (509)
T ss_pred hhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcccc
Confidence 126899999999999999999888888889999999999997 48899999999999999999999999873
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.91 E-value=7.2e-23 Score=203.88 Aligned_cols=292 Identities=13% Similarity=0.072 Sum_probs=205.5
Q ss_pred CCcHHHHHHHHHHHHHhcc-cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHH
Q 015916 11 AGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEG 88 (398)
Q Consensus 11 ~~~w~~l~~~~~~~~~~g~-~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (398)
+.+|......++...+... ....+...|.+++++|++..+.+++.+...++..+ +++.|++.||+|||+++.++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 4467766666665544333 45667778889999999999999987777777755 799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 89 LVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 89 ~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
.++.++.+++ ++++.+++.|++.|++.+..++.....+.+|||+ +||+++|+...+.++|..+.+.+...+.
T Consensus 84 ~~~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 84 GIASTATMFA-------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred HHHHHHHHHh-------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988764 5688888999999999998777777788999995 6999999999999999999888877765
Q ss_pred C------CChhHHHHHHHHHHH-HHHHhhhhcccccCCCCCC-chhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccch
Q 015916 168 A------DDPAKFLFMLAIVPF-VVCLGAIFFLRETTPASTV-DEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETL 239 (398)
Q Consensus 168 ~------~~~~~~~~~~~~~~~-~i~~~~~~~l~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (398)
+ ...|++.+.+..++. +..++..+++||+|++... ++ ++......
T Consensus 157 ~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~--~~~~~~~~------------------------- 209 (412)
T TIGR02332 157 ALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDE--EDKKALKE------------------------- 209 (412)
T ss_pred hCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCH--HHHHHHHH-------------------------
Confidence 3 236777777755554 4445555677888764321 00 00000000
Q ss_pred hHHHHHHHHHHHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCc
Q 015916 240 ALIFSGILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVL 319 (398)
Q Consensus 240 ~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 319 (398)
..+++ .. + .+++ ++ +.+ + .+ .
T Consensus 210 ----------------------~~~~~---~~-~--------~~~~---~~--------------~~~------~-~~-~ 230 (412)
T TIGR02332 210 ----------------------MIDND---QL-T--------LEQP---EG--------------AFA------H-AA-M 230 (412)
T ss_pred ----------------------HHHhc---cc-c--------cccc---cc--------------ccc------c-cc-c
Confidence 00000 00 0 0000 00 000 0 00 0
Q ss_pred CCcchHHHHhccHhHHHHHHHHHhcccceeeeeechHHHHHHh--CCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhH
Q 015916 320 GEDHTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLAL--GYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKM 395 (398)
Q Consensus 320 ~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~~--g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~ 395 (398)
.....++ .++++.+|...+.+++.......+.+++++++++. |.+ +++...++..+++.+|++++|+++||+++|
T Consensus 231 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r 309 (412)
T TIGR02332 231 PQRSMLR-EIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER 309 (412)
T ss_pred cHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc
Confidence 0011223 34578999999888887777777888999999986 444 355678999999999999999999999866
Q ss_pred h
Q 015916 396 V 396 (398)
Q Consensus 396 ~ 396 (398)
+
T Consensus 310 ~ 310 (412)
T TIGR02332 310 K 310 (412)
T ss_pred H
Confidence 4
No 6
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.88 E-value=8.3e-22 Score=197.52 Aligned_cols=156 Identities=14% Similarity=0.103 Sum_probs=123.8
Q ss_pred cHHHHHHHHHHHHHh-cccccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHH
Q 015916 13 KWLGFVTAVWVQAIS-GNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLV 90 (398)
Q Consensus 13 ~w~~l~~~~~~~~~~-g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~i 90 (398)
||..+...++..... ...+.++.+.|.+.+++|+|..+.+++.+...++.. .+++.|++.||+|+|+++.++.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 444444444433322 234566788899999999999999997777777775 489999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCC
Q 015916 91 GYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 91 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 169 (398)
+.+++.+. ++++.+++.|++.|++.|..+.+....+.+|||+ +||+++|+...+.++|+.+.+.+...+.+.
T Consensus 101 ~~~~~~~~-------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 173 (434)
T PRK11663 101 INILFGFS-------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH 173 (434)
T ss_pred HHHHHHHH-------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 98877664 5688888889999998888777788889999985 699999999999999999998888777654
Q ss_pred ChhHHH
Q 015916 170 DPAKFL 175 (398)
Q Consensus 170 ~~~~~~ 175 (398)
..|++.
T Consensus 174 ~gw~~~ 179 (434)
T PRK11663 174 YGWRYG 179 (434)
T ss_pred ccHHHH
Confidence 334433
No 7
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.88 E-value=9e-22 Score=199.10 Aligned_cols=272 Identities=13% Similarity=0.042 Sum_probs=180.6
Q ss_pred cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Q 015916 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 30 ~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~ 108 (398)
...+++..|++++++|++..+.+++.+...++..+ .++.|++.||+|+|+++.++.++.+++.+.++...... ++++
T Consensus 45 r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~--~~~~ 122 (467)
T PRK09556 45 RKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSG--SVSL 122 (467)
T ss_pred hcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcc--cchH
Confidence 45677888999999999999999987777777755 79999999999999999999888888777666532211 1468
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCC---ChhHH-HHHHHHHHH
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD---DPAKF-LFMLAIVPF 183 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~---~~~~~-~~~~~~~~~ 183 (398)
+.+++.|++.|++.+...++....+.+|||+ +||+++|+..++.++|+++.+.+.....+. ..|+. +...++...
T Consensus 123 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~ 202 (467)
T PRK09556 123 GLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIAL 202 (467)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHH
Confidence 8888999999999988878888899999985 699999999999999999887765443221 01211 111122222
Q ss_pred HHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhcccccc
Q 015916 184 VVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFI 263 (398)
Q Consensus 184 ~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~ 263 (398)
+++++..+++++.|++..
T Consensus 203 ~~~i~~~~~~~~~p~~~~-------------------------------------------------------------- 220 (467)
T PRK09556 203 IIGFIGLRYGSDSPEELG-------------------------------------------------------------- 220 (467)
T ss_pred HHHHHHHHhCCCChhhcC--------------------------------------------------------------
Confidence 222222222222221100
Q ss_pred ccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHh
Q 015916 264 KSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLC 343 (398)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~ 343 (398)
.. +. ++...++ .+ + +++. - ++.+....+.-.++.+|++.+|.+.+..++
T Consensus 221 ---------~~-~~-~~~~~~~--~~----------~---~~~~--~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 269 (467)
T PRK09556 221 ---------WG-KA-EEIFGEP--IS----------E---EDKE--T---ESTDMTKWQIFVEYVLKNPVIWLLCFANIF 269 (467)
T ss_pred ---------CC-Ch-hhcccCc--cc----------h---hhhc--c---ccccCcHHHHHHHHHHcChHHHHHHHHHHH
Confidence 00 00 0000000 00 0 0000 0 000000001112348899999999998887
Q ss_pred cccceeeeeechHHHHHH-hCCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 344 GVGTGLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 344 ~~~~g~~~~~n~~~i~~~-~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
......++.+.++.++++ .|++ +++...++..+++.+|++++|+++||+++|+
T Consensus 270 ~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~ 325 (467)
T PRK09556 270 LYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRR 325 (467)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 777666677788887755 6886 3567788899999999999999999999875
No 8
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.88 E-value=3.3e-21 Score=190.68 Aligned_cols=244 Identities=12% Similarity=0.023 Sum_probs=180.8
Q ss_pred cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Q 015916 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 30 ~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~ 108 (398)
.++.+...|++++++|+|..+.+++.+...++..+ +++.|++.||+|+|+++..+..+.+++.+..+++ +++
T Consensus 25 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a-------~~~ 97 (393)
T PRK09705 25 LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY-------PQS 97 (393)
T ss_pred hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC-------cch
Confidence 46778899999999999999999977777777754 8999999999999999999999999999998875 578
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHh
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG 188 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 188 (398)
+.+.+.|++.|+|.+..+......+.+|||++|++++|+..++..+|..+.+.+...+.+.
T Consensus 98 ~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~------------------- 158 (393)
T PRK09705 98 ALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQH------------------- 158 (393)
T ss_pred HHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 8888899999999998887778888999998999999999988888888887776654431
Q ss_pred hhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhccccccccccc
Q 015916 189 AIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNL 268 (398)
Q Consensus 189 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~ 268 (398)
..+||..+.+.+...+ +.....++ ..+
T Consensus 159 ------------------~~~w~~~~~~~~~~~~----------------------------~~~~~~~~----~~~--- 185 (393)
T PRK09705 159 ------------------SETWYQTLAWWALPAV----------------------------VALFAWWW----QSA--- 185 (393)
T ss_pred ------------------cCCHHHHHHHHHHHHH----------------------------HHHHHHHH----Hhc---
Confidence 1245543322111000 00000001 010
Q ss_pred cccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccce
Q 015916 269 NRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTG 348 (398)
Q Consensus 269 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g 348 (398)
++++ ++ ++ + + .+.++.+|++++|.+.+.+++.....
T Consensus 186 ~~~~-----------~~-------------------~~-------~--~-----~~~~~~l~~~~~~~l~~~~~~~~~~~ 221 (393)
T PRK09705 186 REVA-----------SS-------------------HK-------T--T-----TTPVRVVFTPRAWTLGVYFGLINGGY 221 (393)
T ss_pred CCCc-----------cc-------------------cC-------C--C-----cCCcccccCHhHHHHHHHHHHHHHHH
Confidence 0110 00 00 0 0 01235678889998887776665555
Q ss_pred eeeeechHHHHHHhCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 349 LAVMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 349 ~~~~~n~~~i~~~~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
..+.+.++++.++.|.+. .....+++++++.+||++.|++.||+++|+
T Consensus 222 ~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~ 271 (393)
T PRK09705 222 ASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRK 271 (393)
T ss_pred HHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchH
Confidence 567788899999888863 567889999999999999999999999875
No 9
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.87 E-value=9.6e-21 Score=191.01 Aligned_cols=284 Identities=13% Similarity=0.091 Sum_probs=188.8
Q ss_pred CCcHHHHHHHHHHHHH-hcccccccccHHHHHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcccCchHHHHHHHHHH
Q 015916 11 AGKWLGFVTAVWVQAI-SGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPAPIILLIGSLEG 88 (398)
Q Consensus 11 ~~~w~~l~~~~~~~~~-~g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (398)
.++|.++.++++.... .+..+.++.+.|++++++|++.++.+++.+...++. ..+++.|++.||+|+|++++.+.++.
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 4579888887776542 344567888999999999999999999666555555 45899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCchHHHHHH-HHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 89 LVGYGAQWLVVSRKIQPLSYWQMCV-FLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 89 ~ig~~~~~~~~~~~~~~~~~~~l~~-~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
.++.++++++ ++++.+++ .|++.|++.+....+....+.+|||++|+++.|+..++.++|+.+.+++...+.
T Consensus 95 ~~~~~~~~~~-------~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~ 167 (455)
T TIGR00892 95 SLGMILASFS-------SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLF 167 (455)
T ss_pred HHHHHHHHHh-------hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 9888887664 45677664 578889988876667777888999999999999999999999999988887765
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHH
Q 015916 168 ADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGIL 247 (398)
Q Consensus 168 ~~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (398)
+...|++.+++..+..+++.+..+++++.++.
T Consensus 168 ~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~------------------------------------------------ 199 (455)
T TIGR00892 168 ESFGWRGSFLILGGLLLHCCVCGALMRPVGPS------------------------------------------------ 199 (455)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHhCCCCcc------------------------------------------------
Confidence 53333333332222222221111111111100
Q ss_pred HHHHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHH
Q 015916 248 IILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFE 327 (398)
Q Consensus 248 ~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~ 327 (398)
++.+++. +++..++ ++.. + ++.. .+..+...+.-..+
T Consensus 200 -----------------------~~~~~~~-~~~~~~~---~~~~---~-------~~~~------~~~~~~~~~~~~~~ 236 (455)
T TIGR00892 200 -----------------------QRVSKSK-SKEGLPP---DGST---K-------KLSK------KSTAEKINRFLDFS 236 (455)
T ss_pred -----------------------ccccccc-ccccCCC---CCcc---c-------cccc------cchhhhhhhhcchH
Confidence 0000000 0000000 0000 0 0000 00000000111136
Q ss_pred HhccHhHHHHHHHHHhcccceeeeeechHHHHHHhCCC--chhHHHHHHHHHHHHhhhhhhhhhHHH
Q 015916 328 AMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYV--DVSIFVSLTSIWGFFGRIISGSVSEYF 392 (398)
Q Consensus 328 ~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~ 392 (398)
++|++.||.+.+..++...........++++.++.|++ +.+...++.++++.+++++.|+++||.
T Consensus 237 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 303 (455)
T TIGR00892 237 LFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLK 303 (455)
T ss_pred HhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 88999999988877776666666677888888998887 366788999999999999999999973
No 10
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.4e-21 Score=187.10 Aligned_cols=284 Identities=15% Similarity=0.110 Sum_probs=205.7
Q ss_pred cHHHHHHHHHHHHHhc-ccccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHH
Q 015916 13 KWLGFVTAVWVQAISG-NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLV 90 (398)
Q Consensus 13 ~w~~l~~~~~~~~~~g-~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~i 90 (398)
||.+++..++.....- +.-.|++-.|.++++.++|.+|++.+.+...+..-+ -.+.|.++||.++|..+.+|.++.++
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai 106 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHH
Confidence 4445555555433221 234678889999999999999999998888888755 69999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHH--HhHc
Q 015916 91 GYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLC--SALF 167 (398)
Q Consensus 91 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~--~~~~ 167 (398)
..+++++. ++++.+.++.++.|.-+|...+++..++.+|||+ +||+..++-++...+|+++.+++. ..+.
T Consensus 107 ~nil~Gfs-------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~ 179 (448)
T COG2271 107 VNILFGFS-------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA 179 (448)
T ss_pred HHHHHhhh-------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH
Confidence 99998875 5788888888999999998889999999999996 699999999999999999999998 5555
Q ss_pred CCChhHH-HHHHHHHHHHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHH
Q 015916 168 ADDPAKF-LFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGI 246 (398)
Q Consensus 168 ~~~~~~~-~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (398)
.+..|+. +++-+++..++++++.+.+|+.|++...
T Consensus 180 ~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GL-------------------------------------------- 215 (448)
T COG2271 180 FHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGL-------------------------------------------- 215 (448)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCC--------------------------------------------
Confidence 5434443 3333344445555555555666653211
Q ss_pred HHHHHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHH
Q 015916 247 LIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIF 326 (398)
Q Consensus 247 ~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~ 326 (398)
|++|+-.++.+ + . ++ +|+ ++++-...+.=.+
T Consensus 216 ----------------------------P~ie~~~~d~~---e-~-------~~---~~~-------~~~~ls~~~i~~~ 246 (448)
T COG2271 216 ----------------------------PPIEEYRGDPL---E-I-------YE---EEK-------ENEGLTAWQIFVK 246 (448)
T ss_pred ----------------------------CCHHHhhcCch---h-h-------hh---hhc-------cCCCccHHHHHHH
Confidence 11111000000 0 0 00 000 0001111123356
Q ss_pred HHhccHhHHHHHHHHHhcccceeeeeechHHHHHHh-CCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 327 EAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLAL-GYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 327 ~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~~-g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
.+||||..|++.++.++.-..=.++....+-++.+. |++ +++...+++=++...|.+++||+|||+.+.+
T Consensus 247 YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr 319 (448)
T COG2271 247 YVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR 319 (448)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc
Confidence 788999999999999888877778888888777664 666 5778999999999999999999999998443
No 11
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.87 E-value=1.7e-20 Score=190.23 Aligned_cols=263 Identities=13% Similarity=0.081 Sum_probs=172.5
Q ss_pred cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Q 015916 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 30 ~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~ 108 (398)
.+.++.+.|.+++++|++..+.+++.+...++... .++.|++.||+|+|+++..+.++.+++.++.+++ .++
T Consensus 52 ~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-------~s~ 124 (476)
T PLN00028 52 TFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV-------SSA 124 (476)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh-------cCH
Confidence 46677788999999999999999977777777765 6999999999999999999999998888877664 467
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHH
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCL 187 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 187 (398)
+.+++.|++.|++.+.. .+....+.+|||+ +||+++|+..+...+|+.+.+.+...+...
T Consensus 125 ~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~------------------ 185 (476)
T PLN00028 125 TGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPL------------------ 185 (476)
T ss_pred HHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------
Confidence 77778899999887753 4555668899985 699999999876667766655444222100
Q ss_pred hhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhcccccccccc
Q 015916 188 GAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWN 267 (398)
Q Consensus 188 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~ 267 (398)
+ .... . .+..+||..+...+.+.+.. .... .. +.++
T Consensus 186 ~-----~~~~---~---~~~~gWr~~f~i~g~l~l~~---------------------------~l~~-~~----~~~~- 221 (476)
T PLN00028 186 I-----KDAG---A---PSFTAWRIAFFVPGLLHIIM---------------------------GILV-LT----LGQD- 221 (476)
T ss_pred H-----HhcC---C---cchhhhHHHHHHHHHHHHHH---------------------------HHHH-HH----HcCc-
Confidence 0 0000 0 01246776554332211100 0000 00 1111
Q ss_pred ccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccc
Q 015916 268 LNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGT 347 (398)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~ 347 (398)
.|+.+ .++ . + ++.+ .+ + ......+++.+|++++|.+++.+++..+.
T Consensus 222 --~p~~~--------~~~---~----------~---~~~~------~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (476)
T PLN00028 222 --LPDGN--------YRE---L----------K---KSGT------MP-K-DSFSKVLRYGVTNYRTWILALTYGYSFGV 267 (476)
T ss_pred --CCCCc--------hhh---H----------H---hcCc------cc-c-ccHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 11000 000 0 0 0000 00 0 00112457889999999999887766666
Q ss_pred eeeeeechHHHHHH-hCCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 348 GLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 348 g~~~~~n~~~i~~~-~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
...+.+.++.++.+ .|++ ++..+.++.++++.+||+++|+++||++||+
T Consensus 268 ~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~ 319 (476)
T PLN00028 268 ELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRF 319 (476)
T ss_pred HHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhc
Confidence 66666677877655 5886 3667888999999999999999999999874
No 12
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.87 E-value=1.1e-20 Score=188.36 Aligned_cols=164 Identities=16% Similarity=0.120 Sum_probs=128.2
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHhcc-cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHH
Q 015916 5 VSYTSSAGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILL 82 (398)
Q Consensus 5 ~~~~~~~~~w~~l~~~~~~~~~~g~-~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ 82 (398)
.|++.. .+|..+..+.+.....+. .+..+...|.+++++|+|..+.+++.+...++..+ +++.|++.||+|||+++.
T Consensus 9 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~ 87 (426)
T PRK12307 9 YSEITR-PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMM 87 (426)
T ss_pred cccCCH-HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 344443 345555555555544444 33445566888999999999999987777788765 799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHH
Q 015916 83 IGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTD 161 (398)
Q Consensus 83 ~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~ 161 (398)
++.++.+++.++..+. ++++.++++|++.|++.+..+......+.+++|+ +|+++.|+...+.++|..+.+.
T Consensus 88 ~~~~~~~~~~~~~~~~-------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~ 160 (426)
T PRK12307 88 WSIVAYSVGTGLSGLA-------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAY 160 (426)
T ss_pred HHHHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHH
Confidence 9999999999887765 4688888999999999998888888889999985 5999999999999999999888
Q ss_pred HHHhHcCCChhHHHH
Q 015916 162 LCSALFADDPAKFLF 176 (398)
Q Consensus 162 l~~~~~~~~~~~~~~ 176 (398)
+...+.+...|++.+
T Consensus 161 l~~~l~~~~~w~~~f 175 (426)
T PRK12307 161 FMPSFAEAYGWRAAF 175 (426)
T ss_pred HHHHHcccCCHHHHH
Confidence 776665433344333
No 13
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.86 E-value=2.7e-20 Score=183.27 Aligned_cols=180 Identities=17% Similarity=0.140 Sum_probs=142.2
Q ss_pred CCCCcHHHHHHHHHHHHHhcc-cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHH
Q 015916 9 SSAGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSL 86 (398)
Q Consensus 9 ~~~~~w~~l~~~~~~~~~~g~-~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~ 86 (398)
.++++|+.+...++.....+. .+..+...|++++++|++..+.+++.+...++..+ +++.|++.||+|||+++.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 556788887777776655554 46677888999999999999999977777777654 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHh
Q 015916 87 EGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSA 165 (398)
Q Consensus 87 ~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~ 165 (398)
+..++.+++.+. ++++.+++.|++.|++.+..+......+.+++| ++|+++.|+..++.++|..+.+.+...
T Consensus 86 ~~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 86 LFSAGTLACGFA-------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHHHHHHh-------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988887664 468888889999999999888888888999998 469999999999999999998888777
Q ss_pred HcCCC--hhHHHHHHHHHHHHHHHhhhhcccc
Q 015916 166 LFADD--PAKFLFMLAIVPFVVCLGAIFFLRE 195 (398)
Q Consensus 166 ~~~~~--~~~~~~~~~~~~~~i~~~~~~~l~~ 195 (398)
+.+.. .|++.+.+++++.++.+.....+|+
T Consensus 159 l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 190 (405)
T TIGR00891 159 VVPVWGDGWRALFFISILPIIFALWLRKNIPE 190 (405)
T ss_pred HHHhcCccHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 66532 3666666555555444433333333
No 14
>PRK03545 putative arabinose transporter; Provisional
Probab=99.86 E-value=5.5e-20 Score=181.56 Aligned_cols=263 Identities=8% Similarity=-0.019 Sum_probs=180.5
Q ss_pred CCCcHHHHHHHHHHHHHh-cccccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHH
Q 015916 10 SAGKWLGFVTAVWVQAIS-GNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLE 87 (398)
Q Consensus 10 ~~~~w~~l~~~~~~~~~~-g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~ 87 (398)
++++|..+....+..... ...|......|++++++|+|.++.+++.+...++.. ..++.|++.||+|+|+++..+.++
T Consensus 4 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 83 (390)
T PRK03545 4 RKVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVL 83 (390)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 345675444333333222 223333445789999999999999997777666664 478999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhH
Q 015916 88 GLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSAL 166 (398)
Q Consensus 88 ~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~ 166 (398)
.+++.+.+.++ ++++.+++.|++.|++.+..++.....+.+++| ++||+++|+...+.++|..+.+++...+
T Consensus 84 ~~~~~~~~~~~-------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l 156 (390)
T PRK03545 84 FIASHVLSALA-------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVI 156 (390)
T ss_pred HHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHH
Confidence 99998888764 578889899999999888777777788899998 5799999999999999999988887665
Q ss_pred cCCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHH
Q 015916 167 FADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGI 246 (398)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (398)
.+ ..+||..+...+.+...
T Consensus 157 ~~--------------------------------------~~gw~~~f~~~~~~~~l----------------------- 175 (390)
T PRK03545 157 GQ--------------------------------------YLGWRTTFLAIGGGALI----------------------- 175 (390)
T ss_pred HH--------------------------------------HhcHHHHHHHHHHHHHH-----------------------
Confidence 43 34566544222210000
Q ss_pred HHHHHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHH
Q 015916 247 LIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIF 326 (398)
Q Consensus 247 ~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~ 326 (398)
........ ++ +++ ++++ ++ ..+.+
T Consensus 176 ----~~~~~~~~----~~----~~~----------~~~~--------------------~~--------------~~~~~ 199 (390)
T PRK03545 176 ----TLLLLIKL----LP----LLP----------SEHS--------------------GS--------------LKSLP 199 (390)
T ss_pred ----HHHHHHHh----CC----CCC----------CCCc--------------------ch--------------HHHHH
Confidence 00000000 00 000 0000 00 01346
Q ss_pred HHhccHhHHHHHHHHHhcccceeeeeechHHHHHH-hCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 327 EAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLA-LGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 327 ~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~-~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
+.+|++.+|..++..++......+..+.++++.++ .|.+. .....+++++++.+|+++.|+++||+++|.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~ 272 (390)
T PRK03545 200 LLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF 272 (390)
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH
Confidence 78999999877665555444444445566777776 47663 566788899999999999999999998764
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.86 E-value=3.7e-20 Score=183.47 Aligned_cols=154 Identities=15% Similarity=0.016 Sum_probs=128.1
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcc-cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHH
Q 015916 7 YTSSAGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIG 84 (398)
Q Consensus 7 ~~~~~~~w~~l~~~~~~~~~~g~-~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g 84 (398)
.+..+++|.++..+++.....+. .+..+...|.+.+++|++..+.+++.+...++... .++.|++.||+|+|+++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 86 (406)
T PRK11551 7 SASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVS 86 (406)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH
Confidence 34556789888888777665554 56778888999999999999999987777787765 79999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHH
Q 015916 85 SLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLC 163 (398)
Q Consensus 85 ~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~ 163 (398)
.++..++.+++.+. ++++.+.+.|++.|++.+..+......+.+++| ++||+++|+...+..+|+.+.+.+.
T Consensus 87 ~~~~~~~~~~~~~~-------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 159 (406)
T PRK11551 87 VALFGLFSLATAQA-------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIG 159 (406)
T ss_pred HHHHHHHHHHHHHh-------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888887776653 467888889999999998887778888999998 5799999999999999988887776
Q ss_pred HhHc
Q 015916 164 SALF 167 (398)
Q Consensus 164 ~~~~ 167 (398)
..+.
T Consensus 160 ~~~~ 163 (406)
T PRK11551 160 VLAA 163 (406)
T ss_pred HHHc
Confidence 5443
No 16
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.86 E-value=1.6e-19 Score=184.13 Aligned_cols=315 Identities=14% Similarity=0.059 Sum_probs=203.9
Q ss_pred CcHHHHHHHHHHHHHhcc-cccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHH
Q 015916 12 GKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGL 89 (398)
Q Consensus 12 ~~w~~l~~~~~~~~~~g~-~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ 89 (398)
|+|..++..++..+.... ....++..|++.+++|.+..+.+|+.+.+.++.. ..++.|++.||+|||+++.++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 456665555554433332 3455677899999999999999998777777775 47999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhh-c-cCCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 90 VGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNF-R-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 90 ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~F-p-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
++.+.++++ ++++.++++|+++|+|.+..++.....+.+++ | ++|+++.|+.....++|..+.+.+.+.+.
T Consensus 83 ~~~~~~~~a-------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~ 155 (495)
T PRK14995 83 LASLAAAFS-------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL 155 (495)
T ss_pred HHHHHHHHc-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999988765 57889999999999999887766677777888 4 47999999999999999999999999888
Q ss_pred CCChhHHHHHHHHHHHHHHHhhh-hcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHH
Q 015916 168 ADDPAKFLFMLAIVPFVVCLGAI-FFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGI 246 (398)
Q Consensus 168 ~~~~~~~~~~~~~~~~~i~~~~~-~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (398)
+...|++.+++.....++.++.. +++|+.|+.... +.++...........+..+..... ..++. +.+. ..
T Consensus 156 ~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~----~~d~~g~~~~~~~~~~l~~~~~~~-~~~~~--~~~~--~~ 226 (495)
T PRK14995 156 EHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQ----PLNLGHALMLIVAILLLVYSAKTA-LKGFL--SLWV--TS 226 (495)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC----CCChHhHHHHHHHHHHHHHHHHhc-cccCC--chHH--HH
Confidence 88788888877665554444433 445554432111 222222211111111111111110 01100 0000 00
Q ss_pred HHHHHHhh-hhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchH
Q 015916 247 LIILLASP-VAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTI 325 (398)
Q Consensus 247 ~~~~l~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~ 325 (398)
..+++... +..++ .++ .. .+.| .-.
T Consensus 227 ~~~~~~~~~l~~f~---~~e-----------------~~-----------------------------~~~p-----~~~ 252 (495)
T PRK14995 227 LTLLTGALLLGLFI---RTQ-----------------LA-----------------------------ASRP-----MID 252 (495)
T ss_pred HHHHHHHHHHHHHH---HHH-----------------hc-----------------------------CCCC-----CcC
Confidence 00000000 00010 000 00 0001 111
Q ss_pred HHHhccHhHHHHHHHHHhcccceeeeeechHHHHHH-hCCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 326 FEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 326 ~~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~-~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
.+++|++.|+...+..++......+....++...+. .|++ ++..+...++++..++.++.|++.||+++|+
T Consensus 253 ~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 326 (495)
T PRK14995 253 MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRL 326 (495)
T ss_pred HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH
Confidence 468889998887776665554444444556666665 5776 3667888899999999999999999999875
No 17
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.85 E-value=3.7e-20 Score=180.63 Aligned_cols=266 Identities=16% Similarity=0.133 Sum_probs=189.0
Q ss_pred ccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
+.++...|.+++++|++..+.+++.+...++... .++.|++.||+|||+++.++.++..++...+++. .+++
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~~ 83 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA-------GAYV 83 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-------cCHH
Confidence 4556777889999999999999987777777765 7999999999999999999999999988887764 4688
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHH-HH
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVV-CL 187 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i-~~ 187 (398)
.+++.|++.|++.+...++....+.+++|+ +|+++.|+.....++|..+.+.+...+.+...|++.+.+.....++ .+
T Consensus 84 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 163 (399)
T TIGR00893 84 SLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGV 163 (399)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 888999999999998888888899999985 6999999999999999999998888766544444444333322222 22
Q ss_pred hhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhcccccccccc
Q 015916 188 GAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWN 267 (398)
Q Consensus 188 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~ 267 (398)
+..++.+++|+....
T Consensus 164 ~~~~~~~~~~~~~~~----------------------------------------------------------------- 178 (399)
T TIGR00893 164 LWLKFIPDPPQKAKW----------------------------------------------------------------- 178 (399)
T ss_pred HhhheecCCCCcccc-----------------------------------------------------------------
Confidence 222223333321110
Q ss_pred ccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccc
Q 015916 268 LNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGT 347 (398)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~ 347 (398)
+ .++++.... .+ .. + ++++ + ++...+..+.++.+|++++|.+.+..++....
T Consensus 179 ------~--~~~~~~~~~--~~-~~-------~---~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
T TIGR00893 179 ------L--TEEEKYIVV--GG-LL-------A---EQQG------K-GPSTPKKYQIKELLKDRRVWGLALGQFLVNIG 230 (399)
T ss_pred ------C--CHHHHhhcc--hh-hc-------c---cccc------c-cccCCCccchHHHhcCHHHHHHHHHHHHHHhH
Confidence 0 000000000 00 00 0 0000 0 00011123568899999999999988888777
Q ss_pred eeeeeechHHHHHH-hCCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 348 GLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 348 g~~~~~n~~~i~~~-~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
...+.+..+.+.++ .|.+ +.....++..+++.+++++.|+++||++||+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 231 LGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 77777788887765 5665 3567888899999999999999999999985
No 18
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.85 E-value=6.1e-20 Score=180.08 Aligned_cols=243 Identities=15% Similarity=0.065 Sum_probs=162.6
Q ss_pred ccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
+.++...|++++++|+|.+|.+++.+...++... +++.|++.||+|||+++..+......+.. .... .++++
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~~~~------~~~~~ 80 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-RLLD------PFNYE 80 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-HHHH------hccHH
Confidence 4667788999999999999999987777777754 78999999999988876554444433322 2211 03678
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHh
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG 188 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 188 (398)
.+.+.|++.|+|.+. +.+.....++|+| ++|++++++...+..+|..+.+.+...+.+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~-------------------- 139 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT-------------------- 139 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 888999999999985 4566667789998 579999999999999999999877766544
Q ss_pred hhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhccccccccccc
Q 015916 189 AIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNL 268 (398)
Q Consensus 189 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~ 268 (398)
..+||..+...+.+.+.. ..+.... ++ +
T Consensus 140 ------------------~~gWr~~f~~~~~l~~~~----------------------------~~~~~~~---lp-~-- 167 (368)
T TIGR00903 140 ------------------AGGLQLLIIPIAAVAAAG----------------------------IILVLAA---LP-A-- 167 (368)
T ss_pred ------------------ccchHHHHHHHHHHHHHH----------------------------HHHHHHH---cC-C--
Confidence 345665443222111000 0000000 11 0
Q ss_pred cccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccce
Q 015916 269 NRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTG 348 (398)
Q Consensus 269 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g 348 (398)
+|+. +.+. . +..+ . ...+++++|++++|.+++..++.....
T Consensus 168 -~p~~--------~~~~---~--------------~~~~------~-------~~~~~~ll~~~~~~~~~~~~~~~~~~~ 208 (368)
T TIGR00903 168 -LPFQ--------AAEG---F--------------GFKD------A-------VKEFGALAGRKDLWIIGAILGFGVALF 208 (368)
T ss_pred -CCCC--------CCCC---c--------------chHH------H-------HHHHHHHHcChhHHHHHHHHHHHHHHH
Confidence 1100 0000 0 0000 0 013678999999999999999988888
Q ss_pred eeeeechHHHHHHhCCCc-hhHHHHHHHHHHHHhhhhhhhhhHHHHhH
Q 015916 349 LAVMNNMGQIGLALGYVD-VSIFVSLTSIWGFFGRIISGSVSEYFIKM 395 (398)
Q Consensus 349 ~~~~~n~~~i~~~~g~~~-~a~~vsl~si~~~~GRl~~G~lsD~~~~~ 395 (398)
..+.+.+++++++.|++. .....++..+ .|-+..++++||..||
T Consensus 209 ~~~~~wlp~~L~~~g~s~~~~~~~~l~~~---~g~~g~~~~~d~~~r~ 253 (368)
T TIGR00903 209 DNLAIWLEAALRPAGLEDIAGDAVALAIL---AGLIGVAVIPDRVARA 253 (368)
T ss_pred HHHHHHHHHHHHHCCCChHHHHHHHHHHH---HHHHHHHHhhHHhhhh
Confidence 888889999999888764 2233334344 4445568999998765
No 19
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.85 E-value=7.7e-20 Score=186.70 Aligned_cols=189 Identities=13% Similarity=0.052 Sum_probs=139.1
Q ss_pred cHHHHHHHHHHHHHhccc-ccccccHHHHHHHc-----CCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHH
Q 015916 13 KWLGFVTAVWVQAISGNN-YTFSNYSDALKTLM-----NLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGS 85 (398)
Q Consensus 13 ~w~~l~~~~~~~~~~g~~-~~~s~~~~~l~~~~-----g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~ 85 (398)
++..+..+.+..+..|.. ...+...|.+.+++ +.+..+.+++.....++..+ .++.|++.||+|||+++.++.
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~ 93 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 444444444444444432 23344556665542 34555667777777787765 799999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHH
Q 015916 86 LEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCS 164 (398)
Q Consensus 86 ~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~ 164 (398)
++..++.++.+++... .+..+++.++++|++.|++.|..+.....++.+++|+ +||+++++......+|..+.+.+..
T Consensus 94 ~~~~v~~~~~~~~~~~-~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 94 IIMIIATVASGLSPGS-SPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHccCc-ccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988877654111 0001256788899999999999888889999999995 6999999999998888877766654
Q ss_pred hHcC-----------------------CChhHHHHHHHHHHHHHHHhhhhcccccCCCCCC
Q 015916 165 ALFA-----------------------DDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTV 202 (398)
Q Consensus 165 ~~~~-----------------------~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~ 202 (398)
.+.. +..|++++.++.+|.++.++..+++||.|+++..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~ 233 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTAD 233 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 3321 1259999999999999998989999999998654
No 20
>TIGR00895 2A0115 benzoate transport.
Probab=99.84 E-value=3.4e-20 Score=181.80 Aligned_cols=182 Identities=20% Similarity=0.159 Sum_probs=141.9
Q ss_pred CCCcHHHHHHHHHHHHHhcc-cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHH
Q 015916 10 SAGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLE 87 (398)
Q Consensus 10 ~~~~w~~l~~~~~~~~~~g~-~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~ 87 (398)
.+++|..+..+++.....+. .+.++.+.|.+.+++|++..+.+++.....++... .++.|++.||+|||+++..+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 34556666666655554443 45667788899999999999999977777777655 79999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhH
Q 015916 88 GLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSAL 166 (398)
Q Consensus 88 ~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~ 166 (398)
..++.+++.+. ++++.+++.+++.|++.+..+......+.+++|+ +|+++.|+...+..+|..+.+.+...+
T Consensus 92 ~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 164 (398)
T TIGR00895 92 FSVFTLLCALA-------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164 (398)
T ss_pred HHHHHHHHHHc-------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence 88888877653 4677788889999999998888888899999985 699999999999999999999888887
Q ss_pred cCCChhHHHHHHH-HHHHHHHHhhhhcccccCC
Q 015916 167 FADDPAKFLFMLA-IVPFVVCLGAIFFLRETTP 198 (398)
Q Consensus 167 ~~~~~~~~~~~~~-~~~~~i~~~~~~~l~~~p~ 198 (398)
.+...|+..+.+. +.+.+..++..+++|++|+
T Consensus 165 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T TIGR00895 165 IPVFGWRSLFYVGGIAPLLLLLLLMRFLPESID 197 (398)
T ss_pred hhcccceeehhhhhhHHHHHHHHHHHhCCCCCh
Confidence 7765565554444 4555555555566666654
No 21
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.84 E-value=5.7e-20 Score=185.20 Aligned_cols=285 Identities=13% Similarity=0.058 Sum_probs=177.2
Q ss_pred CcHHHHHHHHHHHHHhc-ccccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHH
Q 015916 12 GKWLGFVTAVWVQAISG-NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGL 89 (398)
Q Consensus 12 ~~w~~l~~~~~~~~~~g-~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ 89 (398)
++|..+.+.++...... ..+.++...|.++++ |+|..+.+++.+...++.. .+++.|++.||+|+|++++++.++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~ 104 (452)
T PRK11273 26 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA 104 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHH
Confidence 34655544444333222 234466777888888 9999999997777777765 48999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHh-Hc
Q 015916 90 VGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSA-LF 167 (398)
Q Consensus 90 ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~-~~ 167 (398)
++.+.+++.... ..+++.+++.+++.|++.+..+.+....+.+|||+ +||+++|+...+.++|+.+.+++... ..
T Consensus 105 i~~~~~~~~~~~---~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 181 (452)
T PRK11273 105 AVMLFMGFVPWA---TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA 181 (452)
T ss_pred HHHHHHHhhhcc---cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 888877654111 12566777788999998887776667788899985 69999999999988887666655432 11
Q ss_pred CCChhHHHHHHHH-HHHHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHH
Q 015916 168 ADDPAKFLFMLAI-VPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGI 246 (398)
Q Consensus 168 ~~~~~~~~~~~~~-~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (398)
....|++.+++.. ...++.++..+++|+.|++...
T Consensus 182 ~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~-------------------------------------------- 217 (452)
T PRK11273 182 WFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGL-------------------------------------------- 217 (452)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCC--------------------------------------------
Confidence 1112222222211 1111122222222222211000
Q ss_pred HHHHHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHH
Q 015916 247 LIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIF 326 (398)
Q Consensus 247 ~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~ 326 (398)
+ +.++.+.+.+ ++. +++ ++......+.-.+
T Consensus 218 ------------------------~----~~~~~~~~~~---~~~-------------~~~------~~~~~~~~~~~~~ 247 (452)
T PRK11273 218 ------------------------P----PIEEYKNDYP---DDY-------------NEK------HEQELTAKQIFMQ 247 (452)
T ss_pred ------------------------C----Chhhhhhccc---ccc-------------ccc------cCCCccHHHHHHH
Confidence 0 0000000000 000 000 0000000011123
Q ss_pred HHhccHhHHHHHHHHHhcccceeeeeechHHHHHH-hCCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHh
Q 015916 327 EAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (398)
Q Consensus 327 ~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~-~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~ 394 (398)
.++|++.+|.+++..++.........+.++.+.++ .|++ +++....++++++.+|+++.|+++||+++
T Consensus 248 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~ 318 (452)
T PRK11273 248 YVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFR 318 (452)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 47899999999888877766656677888888887 4776 35567778899999999999999999954
No 22
>PRK03699 putative transporter; Provisional
Probab=99.84 E-value=2.1e-19 Score=177.71 Aligned_cols=264 Identities=14% Similarity=0.099 Sum_probs=183.6
Q ss_pred CCcHHHHHHHHHHHHHhc-ccccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHH
Q 015916 11 AGKWLGFVTAVWVQAISG-NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEG 88 (398)
Q Consensus 11 ~~~w~~l~~~~~~~~~~g-~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (398)
.+||+....+++.....+ ..+.++...|++++++|+|.++.+++.+...++..+ .++.|++.||+|+|+++..+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 456665555555555444 357788899999999999999999977777777765 789999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 89 LVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 89 ~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
.++.++..+. ++++.+++.|++.|++.+..+......+.+++|+ +||.+.++.....++|+.+.+.+...++
T Consensus 83 ~i~~~l~~~~-------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (394)
T PRK03699 83 ILAVAGLMFS-------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLL 155 (394)
T ss_pred HHHHHHHHHc-------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888877654 4678888899999998887777777888999985 6999999998888999888888776654
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHH
Q 015916 168 ADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGIL 247 (398)
Q Consensus 168 ~~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (398)
.+ ..+||..+...+.+.+.
T Consensus 156 ~~-------------------------------------~~gw~~~f~~~~~~~~~------------------------ 174 (394)
T PRK03699 156 AR-------------------------------------SIEWYWVYACIGLVYVA------------------------ 174 (394)
T ss_pred hc-------------------------------------cccHHHHHHHHHHHHHH------------------------
Confidence 31 23555543222110000
Q ss_pred HHHHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHH
Q 015916 248 IILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFE 327 (398)
Q Consensus 248 ~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~ 327 (398)
...+.+. . + .|+.+ ++++ + ++ + +.. +
T Consensus 175 ----~~~~~~~-----~-~---~p~~~-------~~~~---~---------------~~-------~--~~~-------~ 200 (394)
T PRK03699 175 ----IFILTLF-----S-E---FPALG-------KHAP---K---------------AD-------K--PVA-------K 200 (394)
T ss_pred ----HHHHHHh-----c-C---Ccccc-------ccCc---c---------------cc-------C--ccc-------c
Confidence 0000000 0 1 11000 0000 0 00 0 000 0
Q ss_pred HhccHhHHHHHHHHHhcccceeeeeechHHHHHH-hCCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 328 AMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 328 ~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~-~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
...++.+|.+.+..++.......+.+.++.++++ .|++ +.....+.+.+++.+||++.|+++||+++|+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 272 (394)
T PRK03699 201 EKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQR 272 (394)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhh
Confidence 0124678888877777665555667788888865 5776 3667889999999999999999999999986
No 23
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.83 E-value=7.1e-20 Score=178.19 Aligned_cols=265 Identities=16% Similarity=0.183 Sum_probs=178.0
Q ss_pred cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Q 015916 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 30 ~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~ 108 (398)
...++...|.+++++|+|..+.+++.+...++... .++.|++.||+|+|+++.++.++..++.+++.+. +++
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 83 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-------TSL 83 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-------hhH
Confidence 34566778889999999999999987777777765 7999999999999999999999999998888765 467
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHh-HcCCChhHHHHHHHH-HHHHH
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSA-LFADDPAKFLFMLAI-VPFVV 185 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~-~~~~~~~~~~~~~~~-~~~~i 185 (398)
+.+++.+++.|++.+..++.....+.+++|+ +|+++.|+...+..+|..+.+++... +.+...|++.+.+.. ...+.
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (379)
T TIGR00881 84 WVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIV 163 (379)
T ss_pred HHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence 8888899999999998888888899999985 69999999999999999998854333 322222332222111 11122
Q ss_pred HHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhcccccccc
Q 015916 186 CLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKS 265 (398)
Q Consensus 186 ~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~ 265 (398)
.+++.++.|+.|+...
T Consensus 164 ~~~~~~~~~~~~~~~~---------------------------------------------------------------- 179 (379)
T TIGR00881 164 SLICFLLLRDSPQSCG---------------------------------------------------------------- 179 (379)
T ss_pred HHHHheeeCCCccccc----------------------------------------------------------------
Confidence 2222222222221100
Q ss_pred ccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcc
Q 015916 266 WNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGV 345 (398)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~ 345 (398)
.++ .+++.++++ + + +++. ++++....+...++.+|++.+|.+.+..++..
T Consensus 180 -------~~~-~~~~~~~~~---~-~------------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (379)
T TIGR00881 180 -------LPP-AEEMPNEEP---D-G------------DAEK------KEEELTKKQIFLQYVLLNKVLWYISLGYVFVY 229 (379)
T ss_pred -------cCc-cccCccccc---c-c------------cccc------ccccccchHHHHHHHHhcchHHHHHHHHHHHH
Confidence 000 000000000 0 0 0000 00000111234678899999999988877766
Q ss_pred cceeeeeechHHHHHH-hCCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhH
Q 015916 346 GTGLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKM 395 (398)
Q Consensus 346 ~~g~~~~~n~~~i~~~-~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~ 395 (398)
.....+.+..+.+.++ .|.+ +.....++.++.+.+|+++.|++.||..+|
T Consensus 230 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~ 282 (379)
T TIGR00881 230 VVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNG 282 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCC
Confidence 6655666667777654 5776 356788899999999999999999987543
No 24
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.83 E-value=6.2e-19 Score=174.56 Aligned_cols=157 Identities=9% Similarity=-0.017 Sum_probs=126.6
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHhc-ccccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHH
Q 015916 5 VSYTSSAGKWLGFVTAVWVQAISG-NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILL 82 (398)
Q Consensus 5 ~~~~~~~~~w~~l~~~~~~~~~~g-~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ 82 (398)
.+++..|+.|..+........... ..|....+.|++.+++|++.++.++..+...++.. ..++.|++.||+|||+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~ 89 (394)
T PRK10213 10 GADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVI 89 (394)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHH
Confidence 455677778886555555433333 23444446788999999999999996666666664 5899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHH
Q 015916 83 IGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTD 161 (398)
Q Consensus 83 ~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~ 161 (398)
.+.++.+++.++..+. ++++.+++.|++.|++.+...+.....+.+++| ++|+++.++..++.++|..+.++
T Consensus 90 ~~~~~~~~~~~~~~~~-------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~ 162 (394)
T PRK10213 90 LFAVLLTLSCLLVSFA-------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAP 162 (394)
T ss_pred HHHHHHHHHHHHHHHH-------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988887664 578999999999999999887888888899998 46999999999999999999998
Q ss_pred HHHhHcC
Q 015916 162 LCSALFA 168 (398)
Q Consensus 162 l~~~~~~ 168 (398)
+...+.+
T Consensus 163 l~~~l~~ 169 (394)
T PRK10213 163 LGSFLGE 169 (394)
T ss_pred HHHHHHh
Confidence 8877654
No 25
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.83 E-value=1.5e-19 Score=189.94 Aligned_cols=185 Identities=13% Similarity=0.080 Sum_probs=151.9
Q ss_pred CCcHHHHHHHHHHHHHhcc-cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHH
Q 015916 11 AGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEG 88 (398)
Q Consensus 11 ~~~w~~l~~~~~~~~~~g~-~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (398)
+.+|..++++++..+..+. ....+...|.+++++|++..+.+++.+...++.++ .++.|++.||+|||++++++.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 4467666655555544444 34456678889999999999999987777888866 799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 89 LVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 89 ~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
+++.++++++ ++++.++++|++.|+|.+...+....++.+++|+ +||+++++..++..+|+++.+.+...+.
T Consensus 243 ~i~~ll~afa-------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 243 GFFAFFSSFV-------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888887764 4688888999999999998888888999999995 6999999999999999888877655544
Q ss_pred CC-------------ChhHHHHHHHHHHHHHHHhhhhcccccCCCCCC
Q 015916 168 AD-------------DPAKFLFMLAIVPFVVCLGAIFFLRETTPASTV 202 (398)
Q Consensus 168 ~~-------------~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~ 202 (398)
+. ..|++++++++++.++.++..+++||.|+++..
T Consensus 316 ~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~ 363 (742)
T TIGR01299 316 PHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLE 363 (742)
T ss_pred HhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 21 358889999999999999999999999998654
No 26
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.83 E-value=2.5e-19 Score=174.51 Aligned_cols=269 Identities=14% Similarity=0.129 Sum_probs=173.8
Q ss_pred ccccccccHHH-HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCc
Q 015916 29 NNYTFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPL 106 (398)
Q Consensus 29 ~~~~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~ 106 (398)
..+.++.+.|+ +++++|+|..+.+++.+...++..+ .++.|++.||+|+|+++.++.++..++.+++.+. +
T Consensus 16 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~-------~ 88 (366)
T TIGR00886 16 VWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA-------V 88 (366)
T ss_pred HHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-------h
Confidence 34566778885 8999999999999987777777765 7999999999999999999999999998888764 4
Q ss_pred -hHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHH
Q 015916 107 -SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFV 184 (398)
Q Consensus 107 -~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 184 (398)
+++.+++.|++.|++.+. +.+....+.+|+|+ +|+++.++......+|..+.+.+...+...
T Consensus 89 ~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~--------------- 152 (366)
T TIGR00886 89 QSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGS--------------- 152 (366)
T ss_pred hhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHH---------------
Confidence 678888899999988654 45677889999985 699999998866666666555544332210
Q ss_pred HHHhhhhcccccCCCCCCchhhhhhhhHHH-HHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhcccccc
Q 015916 185 VCLGAIFFLRETTPASTVDEEKEEAKYFSI-INTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFI 263 (398)
Q Consensus 185 i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~ 263 (398)
+.+..++ ....+||..+ ...+.+... ........ .
T Consensus 153 -------~~~~~~~------~~~~~w~~~~~~~~~~~~~~---------------------------~~~~~~~~----~ 188 (366)
T TIGR00886 153 -------LIFGAGL------PAHLAWGWAFVIVPAGILLL---------------------------PALLIFFV----G 188 (366)
T ss_pred -------HHhcccc------cccccccchhHHHHHHHHHH---------------------------HHHHHHHh----c
Confidence 0000000 0124566543 111100000 00000000 1
Q ss_pred ccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHh
Q 015916 264 KSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLC 343 (398)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~ 343 (398)
+ + ++++++ ++++.+. ++ +.. . ...+...+.++.+|++++|.+.+.+++
T Consensus 189 ~-~---~~~~~~---~~~~~~~---~~--------------~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (366)
T TIGR00886 189 A-D---TPPGKP---ATGKLSF---KG--------------ARW------S--VGTGALGDQLKVFRDRHTWILALLYSV 236 (366)
T ss_pred c-c---CCcccc---cchhccc---cc--------------ccc------c--ccchhHHHHHHHHhccchhhHHHHHHH
Confidence 1 1 110000 0000000 00 000 0 000001145778999999999888877
Q ss_pred cccceeeeeechHHHHHH-hCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 344 GVGTGLAVMNNMGQIGLA-LGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 344 ~~~~g~~~~~n~~~i~~~-~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
..+....+.+..+.+.++ .|.++ ...+.++..+.+.++|+++|+++||+++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 292 (366)
T TIGR00886 237 TFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGAR 292 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccch
Confidence 766666667778887765 47763 556788899999999999999999999875
No 27
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.83 E-value=4.1e-19 Score=177.94 Aligned_cols=281 Identities=11% Similarity=-0.025 Sum_probs=170.4
Q ss_pred CCCCcHHHHHHHHHHHHHhcc-cccccccHHHHHHHcC---CChhhHHH---HHHHHHhhhhh-hhhhhhhhcccCchHH
Q 015916 9 SSAGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMN---LTQLELNN---LSVVKDIGKAF-GLLAGLASDRIPAPII 80 (398)
Q Consensus 9 ~~~~~w~~l~~~~~~~~~~g~-~~~~s~~~~~l~~~~g---~s~~~~~~---i~~~~~~~~~~-~~~~G~l~Dr~G~r~~ 80 (398)
+++++|..+..+++....... .+.++...|.+.++++ .+..+... +.....++..+ +++.|++.||+|||++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~ 95 (432)
T PRK10406 16 DTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS 95 (432)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH
Confidence 445666655555554444333 4557778888999884 55554333 22333344434 7899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-cCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHH
Q 015916 81 LLIGSLEGLVGYGAQWLVVSRK-IQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAI 158 (398)
Q Consensus 81 ~~~g~~~~~ig~~~~~~~~~~~-~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i 158 (398)
+.++.++++++.++++++..-. +...++..+.++|+++|+|.|..++...+++.||+| ++||++.++...+...|..+
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~ 175 (432)
T PRK10406 96 MLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH
Confidence 9999999999998887641000 000123457779999999999888888999999998 57999999887776666555
Q ss_pred HHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccc
Q 015916 159 FTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSET 238 (398)
Q Consensus 159 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (398)
.+.+...+.. .+ ++ .+-...+||..+...+...+
T Consensus 176 ~~~~~~~~~~-----------------------~~---~~----~~~~~~gWr~~F~i~~~~~l---------------- 209 (432)
T PRK10406 176 ALLVVVVLQQ-----------------------TL---ED----AELREWGWRIPFALGAVLAV---------------- 209 (432)
T ss_pred HHHHHHHHHH-----------------------hC---CH----HHHhccchHHHHHHHHHHHH----------------
Confidence 4433211100 00 00 00013577765532211000
Q ss_pred hhHHHHHHHHHHHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCC
Q 015916 239 LALIFSGILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPV 318 (398)
Q Consensus 239 ~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 318 (398)
+ . +. ++.. .+ |.++ . ++++ .+
T Consensus 210 ------------l-~---~~----~~~~---~~----------e~~~---~--------------~~~~------~~--- 230 (432)
T PRK10406 210 ------------V-A---LW----LRRQ---LD----------ETSQ---Q--------------ETRA------LK--- 230 (432)
T ss_pred ------------H-H---HH----HHhc---CC----------CCch---H--------------HHhh------hc---
Confidence 0 0 00 1100 00 0000 0 0000 00
Q ss_pred cCCcchHHHHhccHhHHHHHHHHHhc-ccceeeeeechHHHHHH-hCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHh
Q 015916 319 LGEDHTIFEAMWTVDFWILFVSFLCG-VGTGLAVMNNMGQIGLA-LGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (398)
Q Consensus 319 ~~~~~t~~~~l~t~~Fw~l~~~~~~~-~~~g~~~~~n~~~i~~~-~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~ 394 (398)
+..+.++++|++++|.+.+...+. ......+.+.+++++++ .|++. .....++..+...++..+.|+++||++|
T Consensus 231 --~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~gr 308 (432)
T PRK10406 231 --EAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGR 308 (432)
T ss_pred --ccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 012467889999999877665543 33334456677887754 68763 4456777788888999999999999998
Q ss_pred Hh
Q 015916 395 MV 396 (398)
Q Consensus 395 ~~ 396 (398)
|+
T Consensus 309 r~ 310 (432)
T PRK10406 309 RT 310 (432)
T ss_pred hH
Confidence 86
No 28
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.82 E-value=2e-19 Score=181.69 Aligned_cols=252 Identities=10% Similarity=0.050 Sum_probs=172.5
Q ss_pred HcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhh
Q 015916 43 LMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNS 121 (398)
Q Consensus 43 ~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g 121 (398)
+++++..+.+++.+...++... +++.|++.||+|+|+++.++.++.+++.++..+... .+++.+++.|++.|++
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG-----GGIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH-----cCchHHHHHHHHHHHh
Confidence 7899999999987777788765 799999999999999999999988888777654321 2466777899999999
Q ss_pred hhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcCC-ChhHHHHHHHHHHHHHHHhh-hhcccccCC
Q 015916 122 TTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVCLGA-IFFLRETTP 198 (398)
Q Consensus 122 ~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~~-~~~l~~~p~ 198 (398)
.+..++.....+.+|+| ++||++.|+..++..+|..+.+++...+.+. ..|+..+.+..+..++..+. ..+.++.|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~ 224 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPS 224 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcc
Confidence 99888888889999998 4799999999999999999999988776543 13332222221111111111 111111111
Q ss_pred CCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhccccccccccccccCCCCCcc
Q 015916 199 ASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNRKRTEPDVE 278 (398)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~ 278 (398)
. ++..+
T Consensus 225 ~--------------------------------------------------------------------------~~~~~ 230 (465)
T TIGR00894 225 I--------------------------------------------------------------------------HPCIS 230 (465)
T ss_pred c--------------------------------------------------------------------------CCCCC
Confidence 0 00000
Q ss_pred hhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccceeeeeechHHH
Q 015916 279 EQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQI 358 (398)
Q Consensus 279 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i 358 (398)
++ +.+.. +++ .+. ++.+. .....+++++|++.+|.+.+..++.......+.+.++.+
T Consensus 231 ~~-~~~~i-----------------~~~---~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ 287 (465)
T TIGR00894 231 KF-EKKYI-----------------NSS---LQG-QKGST-RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTF 287 (465)
T ss_pred HH-HHHHH-----------------Hhh---ccc-ccCCC-CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000 000 000 00000 112357899999999999998888777777777888888
Q ss_pred HHH-hCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 359 GLA-LGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 359 ~~~-~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
+++ +|++. .....++..++..+++++.|+++||+.+|+
T Consensus 288 l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~ 328 (465)
T TIGR00894 288 ISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSK 328 (465)
T ss_pred HHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 765 57763 566778889999999999999999988654
No 29
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.82 E-value=7.6e-19 Score=177.88 Aligned_cols=296 Identities=12% Similarity=0.041 Sum_probs=193.1
Q ss_pred cccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHH
Q 015916 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (398)
Q Consensus 32 ~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~ 110 (398)
..+...|.+.+++|.+..+.+++.+...++..+ .++.|++.||+|||+++.++.++..++.+++.++ ++++.
T Consensus 20 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~~~~ 92 (485)
T TIGR00711 20 IVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA-------PNLEL 92 (485)
T ss_pred HHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc-------CCHHH
Confidence 445678889999999999999987777777765 7999999999999999999999999998887654 56888
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhh
Q 015916 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGA 189 (398)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~ 189 (398)
+.++|++.|++.+...+.....+.+++| ++||++.++...+..+|..+.+.+...+.+...|++.+++.....++.++.
T Consensus 93 l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~ 172 (485)
T TIGR00711 93 MIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVV 172 (485)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHH
Confidence 8899999999999888888888999998 579999999999999999999988888877767877776666555444444
Q ss_pred h-hcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccch-hHHHHHHHHHHHHhhhhhcccccccccc
Q 015916 190 I-FFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETL-ALIFSGILIILLASPVAIPVYSFIKSWN 267 (398)
Q Consensus 190 ~-~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~p~~~~~~~~~~~~~ 267 (398)
. +++|++++.... +.++..............+.....-..++.+.. ...........+.. . .
T Consensus 173 ~~~~~~~~~~~~~~----~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~---- 236 (485)
T TIGR00711 173 AFFILPRDKPAASE----NFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIA----F----V---- 236 (485)
T ss_pred HHHHcCCccccccC----CCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHH----H----H----
Confidence 3 344443322111 222222111111000000000000000000000 00000000000000 0 0
Q ss_pred ccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccc
Q 015916 268 LNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGT 347 (398)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~ 347 (398)
. .|.. +++ .....+.+|+++||...+..++....
T Consensus 237 -------------------------------~----~~~~------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (485)
T TIGR00711 237 -------------------------------V----WELT------DDN-----PLVDLRLFKYRNFTIGCVYMSLLGLG 270 (485)
T ss_pred -------------------------------H----HHHc------CCC-----CccCHHHHcCCChHHHHHHHHHHHHH
Confidence 0 0000 000 11224688999999887777666555
Q ss_pred eeeeeechHHHHHH-hCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 348 GLAVMNNMGQIGLA-LGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 348 g~~~~~n~~~i~~~-~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
.....+.++.+.++ .|++. ........+++..+++++.|++.||++||+
T Consensus 271 ~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 322 (485)
T TIGR00711 271 LYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRK 322 (485)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHH
Confidence 55566677777776 57763 567788899999999999999999999886
No 30
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.82 E-value=3.9e-19 Score=178.22 Aligned_cols=163 Identities=17% Similarity=0.083 Sum_probs=128.7
Q ss_pred ccccHHHHHHHcCCC--------hhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhccc
Q 015916 33 FSNYSDALKTLMNLT--------QLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKI 103 (398)
Q Consensus 33 ~s~~~~~l~~~~g~s--------~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~ 103 (398)
.+...+.+..+++.+ ..+.+++.+...++..+ +++.|++.||+|||++++++.++..++.++..+...
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~--- 123 (481)
T TIGR00879 47 IGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAF--- 123 (481)
T ss_pred hhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcc---
Confidence 344456666666655 88999977777777755 899999999999999999999999998888754311
Q ss_pred CCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHH---HhHcCCChhHHHHHHH
Q 015916 104 QPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLC---SALFADDPAKFLFMLA 179 (398)
Q Consensus 104 ~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~---~~~~~~~~~~~~~~~~ 179 (398)
..+++.++++|++.|+|.+..+......+.+++|+ +|+++.++...+..+|..+.+.+. ....+...|++.+.+.
T Consensus 124 -~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~ 202 (481)
T TIGR00879 124 -ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQ 202 (481)
T ss_pred -ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHH
Confidence 13456788899999999998888888899999984 699999999999999999988887 3333445788888887
Q ss_pred HHHHHHHHhhhhcccccCCC
Q 015916 180 IVPFVVCLGAIFFLRETTPA 199 (398)
Q Consensus 180 ~~~~~i~~~~~~~l~~~p~~ 199 (398)
....++.++..+++++.|+.
T Consensus 203 ~~~~~~~~~~~~~l~~~~~~ 222 (481)
T TIGR00879 203 LIPAGLLFLGLFFLPESPRW 222 (481)
T ss_pred HHHHHHHHHHHhcCCCChHH
Confidence 77777777777788877653
No 31
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.82 E-value=6.2e-19 Score=176.94 Aligned_cols=286 Identities=16% Similarity=0.077 Sum_probs=180.2
Q ss_pred cHHHHHHHHHHHHHhc-ccccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHH
Q 015916 13 KWLGFVTAVWVQAISG-NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLV 90 (398)
Q Consensus 13 ~w~~l~~~~~~~~~~g-~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~i 90 (398)
+|..+.+.++...... ....+....|.+++ +|+++.+.+++.+...++... .++.|++.||+|+|+++.++.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 4554444444333222 23445555676775 699999999977777777755 79999999999999999999999988
Q ss_pred HHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcCC
Q 015916 91 GYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 91 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 169 (398)
+.+.+..... . ..+++.+++.+++.|++.+..+.+....+.++|| ++||+++|+..++.++|+.+.+++.......
T Consensus 104 ~~~~~~~~~~--~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 104 VMLLMGFVPW--A-TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred HHHHHhcccc--c-cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 8877654310 0 1346667778999999888777777788899998 5799999999999999999988877654432
Q ss_pred -ChhHHHHHHHHHH-HHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHH
Q 015916 170 -DPAKFLFMLAIVP-FVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGIL 247 (398)
Q Consensus 170 -~~~~~~~~~~~~~-~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (398)
..|+..+++.... .+..++..+++||.|++...
T Consensus 181 ~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~--------------------------------------------- 215 (438)
T TIGR00712 181 FNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGL--------------------------------------------- 215 (438)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCC---------------------------------------------
Confidence 2344333332222 22222222233332221000
Q ss_pred HHHHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHH
Q 015916 248 IILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFE 327 (398)
Q Consensus 248 ~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~ 327 (398)
++. ++++.+.+ .+. .++. ++ +...++...++
T Consensus 216 -----------------------~~~----~~~~~~~~--~~~-------------~~~~------~~-~~~~~~~~~~~ 246 (438)
T TIGR00712 216 -----------------------PPI----EEYRNDYP--DDY-------------NEKA------EQ-ELTAKEIFMQY 246 (438)
T ss_pred -----------------------CCc----hhcccccc--ccc-------------cccc------cc-ccchHHHHHHH
Confidence 000 00000000 000 0000 00 00001111235
Q ss_pred HhccHhHHHHHHHHHhcccceeeeeechHHHHHH-hCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 328 AMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLA-LGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 328 ~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~-~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
.+|++.+|.+.+..++.......+.+.++.++++ .|.+. +.+..+++++.+.+|++++|+++||+++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 318 (438)
T TIGR00712 247 VLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGN 318 (438)
T ss_pred HccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 7899999999887766655555667788888887 47763 567788899999999999999999996543
No 32
>TIGR00898 2A0119 cation transport protein.
Probab=99.81 E-value=1.4e-19 Score=184.75 Aligned_cols=163 Identities=16% Similarity=0.218 Sum_probs=135.6
Q ss_pred cccccccHHHHHHHcCCC---hhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 015916 30 NYTFSNYSDALKTLMNLT---QLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQP 105 (398)
Q Consensus 30 ~~~~s~~~~~l~~~~g~s---~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~ 105 (398)
.|.++.+.+.++++++++ ..+.++..+...++..+ +++.|++.||+|||++++++.++..++.++.+++
T Consensus 105 ~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~------- 177 (505)
T TIGR00898 105 EYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS------- 177 (505)
T ss_pred EecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc-------
Confidence 355556778899999999 88999988888888866 7999999999999999999999999888887764
Q ss_pred chHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHH
Q 015916 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFV 184 (398)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 184 (398)
++++.++++|++.|++.+..+......+.+++|+ +|+.+.++...+.++|..+.+.+.. ++.+ |++.+++..++.+
T Consensus 178 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~-~~~~--wr~~~~~~~i~~~ 254 (505)
T TIGR00898 178 PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAY-FIPD--WRWLQLAVSLPTF 254 (505)
T ss_pred ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHH-HhhH--HHHHHHHHHHHHH
Confidence 5788899999999999998888888999999985 6999999998888888777766654 3332 8888887777887
Q ss_pred HHHhhhhcccccCCCCCC
Q 015916 185 VCLGAIFFLRETTPASTV 202 (398)
Q Consensus 185 i~~~~~~~l~~~p~~~~~ 202 (398)
+.++..+++||.|++...
T Consensus 255 ~~~~~~~~~~esp~~l~~ 272 (505)
T TIGR00898 255 LFFLLSWFVPESPRWLIS 272 (505)
T ss_pred HHHHHHHhcCCChHHHHH
Confidence 777777888998877543
No 33
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.81 E-value=2e-18 Score=169.18 Aligned_cols=246 Identities=12% Similarity=0.041 Sum_probs=172.4
Q ss_pred cccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHH
Q 015916 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (398)
Q Consensus 32 ~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~ 110 (398)
.+....|.+++++|.|..+.+++.+...++... .++.|++.||+|+|+++.++.++..++.+.+.+. ++++.
T Consensus 23 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~~~ 95 (385)
T TIGR00710 23 MYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS-------NNIET 95 (385)
T ss_pred HhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-------ccHHH
Confidence 344556889999999999999987777777765 7999999999999999999999999988887764 46788
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhh
Q 015916 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGA 189 (398)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~ 189 (398)
+++.+++.|++.+...++....+.+++|+ +|+++.|+......+|..+.+.+...+.+
T Consensus 96 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~--------------------- 154 (385)
T TIGR00710 96 LLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV--------------------- 154 (385)
T ss_pred HHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 88899999999998888888889999985 69999999999999999888888776543
Q ss_pred hhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhcccccccccccc
Q 015916 190 IFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLN 269 (398)
Q Consensus 190 ~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~ 269 (398)
..+|+..+...+.+... ..... ... .++
T Consensus 155 -----------------~~~~~~~~~~~~~~~~~---------------------------~~~~~-~~~---~~~---- 182 (385)
T TIGR00710 155 -----------------WLSWHAIFAFLSLAGIL---------------------------LSALI-FFI---LPE---- 182 (385)
T ss_pred -----------------HcCHHHHHHHHHHHHHH---------------------------HHHHH-HHh---CCC----
Confidence 23454433211110000 00000 000 010
Q ss_pred ccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhccccee
Q 015916 270 RKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGL 349 (398)
Q Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g~ 349 (398)
.++. ++++ ++++ ...+.++.+|++++|.+.+...+......
T Consensus 183 ~~~~--------~~~~------------------~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (385)
T TIGR00710 183 TLPY--------EARI------------------QIST-------------YFETFLLLLKSKMFWGYALIYGASFGGFF 223 (385)
T ss_pred CCCC--------cccC------------------CHHH-------------HHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 0000 0000 0000 01235778899999988776655544444
Q ss_pred eeeechHHHHH-HhCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 350 AVMNNMGQIGL-ALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 350 ~~~~n~~~i~~-~~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
......+.+.+ +.|.++ .....+..++...+|+++.|+++||+++|+
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 273 (385)
T TIGR00710 224 AFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKS 273 (385)
T ss_pred HHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 44455566665 567763 556778889999999999999999999876
No 34
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.81 E-value=1.3e-18 Score=169.38 Aligned_cols=243 Identities=12% Similarity=0.037 Sum_probs=172.5
Q ss_pred ccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
.+++...|++++++|+|.++.+++.+...++..+ +++.|++.||+|+|+++.++.++..++.+.. .. ++.+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~-------~~~~ 88 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA-------PGTA 88 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh-------ccHH
Confidence 4567788999999999999999987777777765 8999999999999999999998888777655 22 3567
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhh
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGA 189 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~ 189 (398)
.+.+.|++.|+|.+.........+.+++|++|+++.|+...+.++|..+.+.+...+.+..
T Consensus 89 ~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~------------------- 149 (355)
T TIGR00896 89 LLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHS------------------- 149 (355)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------------
Confidence 7778899999999877666667788999999999999999999999888887766553210
Q ss_pred hhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhcccccccccccc
Q 015916 190 IFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLN 269 (398)
Q Consensus 190 ~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~ 269 (398)
..+||..+.....+.+ +.....++ + . +
T Consensus 150 -----------------~~~w~~~f~~~~~~~~----------------------------~~~~~~~~-----~-~-~- 176 (355)
T TIGR00896 150 -----------------GGHWQQALAWWALPAL----------------------------LALLAWIP-----Q-V-R- 176 (355)
T ss_pred -----------------hhhHHHHHHHHHHHHH----------------------------HHHHHHhh-----h-h-c-
Confidence 1235544322211000 00000001 0 0 0
Q ss_pred ccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhccccee
Q 015916 270 RKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGL 349 (398)
Q Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g~ 349 (398)
++ .++ +++ . ...+.++++|++.+|.+.+..++......
T Consensus 177 ~~-----------~~~-------------------~~~------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (355)
T TIGR00896 177 RR-----------VAA-------------------NQT------T------TRLTPVRIWRSPLAWQVTVFFGLQSGLYY 214 (355)
T ss_pred cc-----------cCC-------------------CCC------C------CCCCCchhhcCHhHHHHHHHHHHHHHHHH
Confidence 00 000 000 0 01124578899999988776666655656
Q ss_pred eeeechHHHHHHhCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhH
Q 015916 350 AVMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKM 395 (398)
Q Consensus 350 ~~~~n~~~i~~~~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~ 395 (398)
.+.+.++.+.++.|.+. .....+++.++..+||++.|+++||+++|
T Consensus 215 ~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~ 262 (355)
T TIGR00896 215 SLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQ 262 (355)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc
Confidence 66778888998888863 56788999999999999999999999543
No 35
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.81 E-value=1.6e-18 Score=172.78 Aligned_cols=279 Identities=12% Similarity=0.065 Sum_probs=178.3
Q ss_pred HHHHHHHHHHH-HHhcccccccccHHHHHH-HcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcccCchHHHHHHHHHHHH
Q 015916 14 WLGFVTAVWVQ-AISGNNYTFSNYSDALKT-LMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPAPIILLIGSLEGLV 90 (398)
Q Consensus 14 w~~l~~~~~~~-~~~g~~~~~s~~~~~l~~-~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~~g~~~~~i 90 (398)
|+.+..+.+.. .+...-+.++...+.+.+ ++|+|++|.+++.+...++. +..++.|++.||+|+|+++.++.++..+
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 45555555543 233345677777788765 89999999999655555554 4568889999999999999999999999
Q ss_pred HHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCC
Q 015916 91 GYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 91 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 169 (398)
..+..+++..+.. ++++.+++.|++.|++ +..+.+....+.+|||+ +||++.|+..+...+|..+...+...+..
T Consensus 113 ~~~~~~~a~~~~~--~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~- 188 (462)
T PRK15034 113 PCVWLGIAVQNPN--TPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIF- 188 (462)
T ss_pred HHHHHHHHHcccC--CCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHH-
Confidence 9888876533222 4688999999999998 55778899999999996 59999999976656666655544332210
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHH
Q 015916 170 DPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILII 249 (398)
Q Consensus 170 ~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (398)
..+...+--+..+.... ...+++........+.
T Consensus 189 ---------------~~l~~~~G~~~~~~~~g----~~~~~~~~~~~~~~~~---------------------------- 221 (462)
T PRK15034 189 ---------------VPVFAFLGVNGVPQADG----SVMSLANAAWIWVPLL---------------------------- 221 (462)
T ss_pred ---------------HHHHHHhcccccccccc----chHHHHHHHHHHHHHH----------------------------
Confidence 00000010001110000 1344554332111100
Q ss_pred HHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHh
Q 015916 250 LLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAM 329 (398)
Q Consensus 250 ~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l 329 (398)
++...+.+. .. + +. ++.+ .+ -...++.+
T Consensus 222 iv~~i~~~~----~~-~---~~----------~~~~--------------------~~--------------~~~~~~vl 249 (462)
T PRK15034 222 AIATIAAWS----GM-N---DI----------ASSR--------------------AS--------------IADQLPVL 249 (462)
T ss_pred HHHHHHHHH----hC-C---Cc----------cccc--------------------cC--------------HHHHHHHh
Confidence 000000011 11 0 00 0000 00 01246799
Q ss_pred ccHhHHHHHHHHHhcccceeeeeechHHHHHHhCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 330 WTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 330 ~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
|+|+.|++.+.+++..+...++.+.++.+.++ .+++ ......+..+...++|.++|+++||+++++
T Consensus 250 k~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~ 317 (462)
T PRK15034 250 QRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVR 317 (462)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchH
Confidence 99999999999999888888887788888766 3433 222345668889999999999999999886
No 36
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.81 E-value=1.6e-18 Score=176.45 Aligned_cols=143 Identities=15% Similarity=0.003 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHhcc-cccccccHHHHHHHcCCChhh-HHHH-----HHHHHhhhhh-hhhhhhhhcccCchHHHHHHH
Q 015916 14 WLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLE-LNNL-----SVVKDIGKAF-GLLAGLASDRIPAPIILLIGS 85 (398)
Q Consensus 14 w~~l~~~~~~~~~~g~-~~~~s~~~~~l~~~~g~s~~~-~~~i-----~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~ 85 (398)
+..+..+.+.....+. .+.++...|.+.++++.+..+ .+++ .....++..+ +++.|++.||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 3444444444444443 345566778888888644322 1221 2334455554 789999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCchHH--------HHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhH
Q 015916 86 LEGLVGYGAQWLVVSRKIQPLSYW--------QMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLST 156 (398)
Q Consensus 86 ~~~~ig~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~ 156 (398)
++++++.++++++ ++++ +++++|+++|+|.|..+++...++.+|+| ++||++.++...+..+|.
T Consensus 95 ~l~~i~~~~~a~~-------~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~ 167 (490)
T PRK10642 95 VIMSISTFCIGLI-------PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGF 167 (490)
T ss_pred HHHHHHHHHHHhc-------ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 9999999998875 3443 36678999999999988899999999998 579999999987777776
Q ss_pred HHHHHHH
Q 015916 157 AIFTDLC 163 (398)
Q Consensus 157 ~i~~~l~ 163 (398)
.+.+.+.
T Consensus 168 ~lg~~~~ 174 (490)
T PRK10642 168 VLGAGVV 174 (490)
T ss_pred HHHHHHH
Confidence 6655443
No 37
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.80 E-value=6.8e-19 Score=168.88 Aligned_cols=272 Identities=15% Similarity=0.041 Sum_probs=187.5
Q ss_pred CCCcHHHHHHHHHHH-HHhcccccccccHHHHHHHcCCChhhHHHH-HHHHHhhhhhhhhhhhhhcccCchHHHHHHHHH
Q 015916 10 SAGKWLGFVTAVWVQ-AISGNNYTFSNYSDALKTLMNLTQLELNNL-SVVKDIGKAFGLLAGLASDRIPAPIILLIGSLE 87 (398)
Q Consensus 10 ~~~~w~~l~~~~~~~-~~~g~~~~~s~~~~~l~~~~g~s~~~~~~i-~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~ 87 (398)
++.+++.+..+.+.. .+...-+.++...+.+++++|+|..|.+++ .+....|.+.=++.|.+.||||+|++..++.++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 344566666666653 233344677888888999999999999995 555555667789999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhH
Q 015916 88 GLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSAL 166 (398)
Q Consensus 88 ~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~ 166 (398)
..+-.+..+++... +++|++.+.+++.|++.+. +...+..+++|||| ++|.|+|+.- ..++|.++...+...+
T Consensus 89 ~~IP~~~~~~a~~~----~~~~~ll~~gll~G~~Gas-Fav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 89 LLIPCLGLAFAVTY----PSTWQLLVIGLLLGLAGAS-FAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHHHccC----CchHHHHHHHHHHhcccce-ehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 99988888876443 4578999999999987764 46788899999996 5899999998 4567766654443332
Q ss_pred cCCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHH
Q 015916 167 FADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGI 246 (398)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (398)
..... ...|+........ .++
T Consensus 163 ~~~~g-----------------------------------~~~w~~~~~i~~~-~l~----------------------- 183 (417)
T COG2223 163 AVAFG-----------------------------------FLAWRNVAGIYVV-ALA----------------------- 183 (417)
T ss_pred HHHHh-----------------------------------hHHHHHHHHHHHH-HHH-----------------------
Confidence 21000 0124432211110 000
Q ss_pred HHHHHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHH
Q 015916 247 LIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIF 326 (398)
Q Consensus 247 ~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~ 326 (398)
+..-+.+.. .+ +. | +.++ + .+ + .+....+
T Consensus 184 ----v~~v~~~~~---~~-d~---p----------~~r~---~---------------~~-------~-----~~~~~~~ 212 (417)
T COG2223 184 ----IAAVLAWLG---MN-DV---P----------EHRA---S---------------VK-------P-----QLPAQLK 212 (417)
T ss_pred ----HHHHHHHHH---hC-CC---h----------hhhc---c---------------cc-------c-----cchhHHH
Confidence 000000110 11 10 0 0011 0 00 0 0013357
Q ss_pred HHhccHhHHHHHHHHHhcccceeeeeechHHHHHHh-CCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhHhc
Q 015916 327 EAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLAL-GYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKMVH 397 (398)
Q Consensus 327 ~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~~-g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~~~ 397 (398)
.+.|+++-|.+.+.++...|.-.++.+.++.++++. |.+ ++.....++...+.+-|.++|+++||++.++.
T Consensus 213 ~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv 286 (417)
T COG2223 213 AVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRV 286 (417)
T ss_pred HHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhH
Confidence 788899999999999999999999999999988875 666 35589999999999999999999999998763
No 38
>PRK10504 putative transporter; Provisional
Probab=99.80 E-value=1.6e-17 Score=168.09 Aligned_cols=153 Identities=12% Similarity=0.023 Sum_probs=124.1
Q ss_pred ccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
+.++...|.+.+++|++..+.+++.+...++.. ..++.|++.||+|+|++++.+.++.+++.+...+. ++++
T Consensus 27 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~~ 99 (471)
T PRK10504 27 TIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS-------GTLN 99 (471)
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh-------CCHH
Confidence 445567788999999999999997777777765 47999999999999999999998888888776553 4677
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHh
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG 188 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 188 (398)
.+.+.|++.|++.+...+.....+.+++|+ +|+.+.|+......+|..+.+.+...+.+...|++.+.+......+..+
T Consensus 100 ~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~ 179 (471)
T PRK10504 100 ELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAI 179 (471)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 888899999999998777777888999985 6999999999999999999999988887776788777666544444443
Q ss_pred hh
Q 015916 189 AI 190 (398)
Q Consensus 189 ~~ 190 (398)
..
T Consensus 180 ~~ 181 (471)
T PRK10504 180 AT 181 (471)
T ss_pred HH
Confidence 33
No 39
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.79 E-value=3.7e-18 Score=172.82 Aligned_cols=166 Identities=14% Similarity=0.095 Sum_probs=123.7
Q ss_pred cccHHHHHHHc--------CCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHh---c
Q 015916 34 SNYSDALKTLM--------NLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVS---R 101 (398)
Q Consensus 34 s~~~~~l~~~~--------g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~---~ 101 (398)
+...|.+++++ +++..+.+++.+...++..+ +++.|++.||+|||++++++.+++.++.+..++... .
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~ 111 (479)
T PRK10077 32 SGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTS 111 (479)
T ss_pred hHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 33445577766 89999999987777888865 799999999999999999999999888877664210 0
Q ss_pred c-cCC-chHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHc--------CCC
Q 015916 102 K-IQP-LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF--------ADD 170 (398)
Q Consensus 102 ~-~~~-~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~--------~~~ 170 (398)
. .++ ..++.++++|++.|++.|..++....++.+|+|+ +||+++|+...+..+|..+.+.+...+. +..
T Consensus 112 ~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 191 (479)
T PRK10077 112 IGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTD 191 (479)
T ss_pred ccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccC
Confidence 0 001 2245567899999999999888899999999985 6999999999998899887655443322 223
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcccccCCC
Q 015916 171 PAKFLFMLAIVPFVVCLGAIFFLRETTPA 199 (398)
Q Consensus 171 ~~~~~~~~~~~~~~i~~~~~~~l~~~p~~ 199 (398)
.|++.+.+..++.++.++..+++||.|++
T Consensus 192 gWr~~f~~~~~~~~~~~~~~~~l~~s~~~ 220 (479)
T PRK10077 192 GWRYMFASEAIPALLFLMLLYFVPETPRY 220 (479)
T ss_pred ChHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence 57777776666666666666677776654
No 40
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.79 E-value=7.3e-18 Score=166.06 Aligned_cols=131 Identities=11% Similarity=0.035 Sum_probs=111.5
Q ss_pred ccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
+......|.+++++|++.++.+++.+...++..+ .++.|++.||+|+|+++.++.++.+++.+++.++ ++++
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~-------~~~~ 92 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS-------SSYL 92 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh-------CcHH
Confidence 3445577889999999999999987777788765 7999999999999999999999999998887764 5788
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
.+++.|++.|++.+.........+.+++|+ +|++++|+...+..+|..+.+++...+.+
T Consensus 93 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 152 (382)
T PRK10091 93 MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ 152 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence 999999999999887766666778899986 69999999999999999988888766543
No 41
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.79 E-value=2.2e-17 Score=159.82 Aligned_cols=267 Identities=13% Similarity=0.105 Sum_probs=202.9
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcc-cccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHH
Q 015916 7 YTSSAGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIG 84 (398)
Q Consensus 7 ~~~~~~~w~~l~~~~~~~~~~g~-~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g 84 (398)
++..++.|..+..-.+..++.|+ -+.-.-..|++.+++|.|..+.++..+.+..+.. .+|+...+.||+.||++++..
T Consensus 5 ~~~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~ 84 (394)
T COG2814 5 ATARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGL 84 (394)
T ss_pred ccccccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHH
Confidence 34444556655554455555555 3555667899999999999999996666666665 589999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHH
Q 015916 85 SLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLC 163 (398)
Q Consensus 85 ~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~ 163 (398)
.+++.++-++.+++ ++++.+.+.|++.|+..|...........+.-|+ ||++|+++..++..++..+..|+.
T Consensus 85 l~lFi~~n~l~alA-------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLG 157 (394)
T COG2814 85 LALFIVSNLLSALA-------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLG 157 (394)
T ss_pred HHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHH
Confidence 99999999999886 6899999999999999998888888889999984 799999999999999999998887
Q ss_pred HhHcCCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHH
Q 015916 164 SALFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIF 243 (398)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (398)
..+=+ ..+||..+.....+.++..+...
T Consensus 158 t~ig~--------------------------------------~~GWR~~F~~ia~l~ll~~~~~~-------------- 185 (394)
T COG2814 158 TFLGQ--------------------------------------LFGWRATFLAIAVLALLALLLLW-------------- 185 (394)
T ss_pred HHHHH--------------------------------------HhhHHHHHHHHHHHHHHHHHHHH--------------
Confidence 76522 57888876544433222221110
Q ss_pred HHHHHHHHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcc
Q 015916 244 SGILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDH 323 (398)
Q Consensus 244 ~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 323 (398)
...| |++. .++ . ..+-.
T Consensus 186 -------~~lP----------------~~~~--------~~~----------------------------~----~~~~~ 202 (394)
T COG2814 186 -------KLLP----------------PSEI--------SGS----------------------------L----PGPLR 202 (394)
T ss_pred -------HhCC----------------CccC--------CCC----------------------------C----Ccchh
Confidence 0000 0000 000 0 00112
Q ss_pred hHHHHhccHhHHHHHHHHHhcccceeeeeechHHHHHHh-CCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 324 TIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLAL-GYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 324 t~~~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~~-g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
+..+.+|+|+.|...+..++..+...+..+.+.+++++. |.+ +.++..-+++++..+|-++.|.++|| +.|+
T Consensus 203 ~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~ 277 (394)
T COG2814 203 TLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRR 277 (394)
T ss_pred HHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchh
Confidence 357899999999999999999999999999999999987 555 36678899999999999999999999 5544
No 42
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.78 E-value=3.5e-17 Score=162.91 Aligned_cols=275 Identities=16% Similarity=0.112 Sum_probs=190.2
Q ss_pred HHHHHcC--CChhhHHH----HHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHH
Q 015916 39 ALKTLMN--LTQLELNN----LSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (398)
Q Consensus 39 ~l~~~~g--~s~~~~~~----i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l 111 (398)
.+.+++| .+..+..+ +.+...+|.++ +...|++.||+|||..+.++.++..++.+.+.++... +++..+
T Consensus 44 t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~----~~~e~l 119 (485)
T KOG0569|consen 44 TLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSA----PSFEML 119 (485)
T ss_pred HHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHh----hhHHHH
Confidence 3445666 44444433 35555667766 6899999999999999999999998888887765332 467788
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHhhccC-CcchHHHHHhhhhhhHHHHHHHHHh-HcC-CChhHHHHHHHHHHHHHHHh
Q 015916 112 CVFLCMGGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGYVGLSTAIFTDLCSA-LFA-DDPAKFLFMLAIVPFVVCLG 188 (398)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~-~~~-~~~~~~~~~~~~~~~~i~~~ 188 (398)
.++|++.|+..|........++.|.-|++ ||....+...+..+|-.+...+... ++. ++.|.+++....+++++.++
T Consensus 120 i~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~ 199 (485)
T KOG0569|consen 120 ILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA 199 (485)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH
Confidence 88999999999988888888899999975 9999999999988887777554433 444 36699999999999999999
Q ss_pred hhhcccccCCCCCC-chhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhcccccccccc
Q 015916 189 AIFFLRETTPASTV-DEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWN 267 (398)
Q Consensus 189 ~~~~l~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~ 267 (398)
..+++||.|+++.. +++.+++.+.... ++..
T Consensus 200 ~l~~~PESPk~Ll~~k~~~~~A~~sl~~-----------------------------------------------y~G~- 231 (485)
T KOG0569|consen 200 LLPFLPESPKYLLIKKGDEEEARKALKF-----------------------------------------------YRGK- 231 (485)
T ss_pred HHhcCCCCcchHHHHcCCHHHHHHHHHH-----------------------------------------------HhCC-
Confidence 99999999998754 3333333321000 2210
Q ss_pred ccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHh----HHHHHHHHHh
Q 015916 268 LNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVD----FWILFVSFLC 343 (398)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~----Fw~l~~~~~~ 343 (398)
.|++++++... + |.+ +++...+++.|.+|++|+++ .++.....++
T Consensus 232 -------~~~~~~~e~~~--------------~----e~~------~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~ 280 (485)
T KOG0569|consen 232 -------EDVEAEIEEML--------------R----EIE------EEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFA 280 (485)
T ss_pred -------CcchhHHHHHH--------------H----HHH------HhccccccCCcHHHHhcCcchhHHHHHHHHHHHH
Confidence 00001001000 0 000 00011224678899998753 3344444455
Q ss_pred cccceee-eeechHHHHHHhCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 344 GVGTGLA-VMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 344 ~~~~g~~-~~~n~~~i~~~~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
....|.. +......|.++.|.++ +.......++.|.+..++..++.||+|||.
T Consensus 281 qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRp 336 (485)
T KOG0569|consen 281 QQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRP 336 (485)
T ss_pred HHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcH
Confidence 5555555 4444556888899874 566778899999999999999999999985
No 43
>PRK11043 putative transporter; Provisional
Probab=99.78 E-value=1.5e-17 Score=164.69 Aligned_cols=242 Identities=16% Similarity=0.059 Sum_probs=166.3
Q ss_pred cccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHH
Q 015916 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (398)
Q Consensus 32 ~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~ 110 (398)
.+....|++++++|++.++.+++.+...++..+ +++.|++.||+|+|+++..+.++..++.+++.+. ++++.
T Consensus 24 ~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~~~~ 96 (401)
T PRK11043 24 MYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV-------ESAAQ 96 (401)
T ss_pred HHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh-------cCHHH
Confidence 333445667899999999999987777777765 7999999999999999999999988888877654 46788
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhh
Q 015916 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGA 189 (398)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~ 189 (398)
+++.|++.|++.+.........+.+++|+ +|+.+.+......++++.+.+.+...+.+
T Consensus 97 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~--------------------- 155 (401)
T PRK11043 97 LLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN--------------------- 155 (401)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------
Confidence 88899999998876666666778899986 57888888888888888888888776544
Q ss_pred hhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhcccccccccccc
Q 015916 190 IFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLN 269 (398)
Q Consensus 190 ~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~ 269 (398)
..+||..+.....+.+. ...+ ... +++
T Consensus 156 -----------------~~g~~~~~~~~~~~~~~---------------------------~~~~-~~~----~~~---- 182 (401)
T PRK11043 156 -----------------HFGWQAIFATLFAITLL---------------------------LILP-TLR----LKP---- 182 (401)
T ss_pred -----------------cCChHHHHHHHHHHHHH---------------------------HHHH-HHH----cCC----
Confidence 23455433211110000 0000 000 110
Q ss_pred ccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhccccee
Q 015916 270 RKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGL 349 (398)
Q Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g~ 349 (398)
++ .++ + ++ + +..+.++.+|++++|...+...+......
T Consensus 183 ~~-----------~~~---~---------------~~-------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (401)
T PRK11043 183 SK-----------KAR---K---------------QS-------Q------DALTFKQLLKSKTYLGNVLIFAACSAAFF 220 (401)
T ss_pred CC-----------Ccc---c---------------cc-------h------HHHHHHHHHcChhHHHHHHHHHHHHHHHH
Confidence 00 000 0 00 0 01346788999999877665555444444
Q ss_pred eeeechHHHHHHhCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 350 AVMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 350 ~~~~n~~~i~~~~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
.+.+..+.+.++.|++. .........++..+|+++.+++.||+++|+
T Consensus 221 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~ 269 (401)
T PRK11043 221 AWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQ 269 (401)
T ss_pred HHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 45566777788888874 445556677888999999999999998775
No 44
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.78 E-value=2e-17 Score=164.68 Aligned_cols=277 Identities=11% Similarity=0.045 Sum_probs=183.2
Q ss_pred HHhcccccc-cccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcc
Q 015916 25 AISGNNYTF-SNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRK 102 (398)
Q Consensus 25 ~~~g~~~~~-s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~ 102 (398)
+..|..+.. +...|.+++++|+|..|.+++.+...++..+ +++.|++.||+|+|+++.+|.++++++.+++..+...
T Consensus 13 ~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~- 91 (410)
T TIGR00885 13 ALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEI- 91 (410)
T ss_pred HHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 344544333 5778999999999999999988888888765 8999999999999999999999999998876543211
Q ss_pred cCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCCh---hHHHHHH
Q 015916 103 IQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDP---AKFLFML 178 (398)
Q Consensus 103 ~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~---~~~~~~~ 178 (398)
++++.+++.+++.|.|.|...++....+.++.|+ +|++..++..+.+++|+.+.+.+...++.... .....
T Consensus 92 ---~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~-- 166 (410)
T TIGR00885 92 ---MNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVL-- 166 (410)
T ss_pred ---ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhh--
Confidence 3678888899999999999888888888888885 58999999999999999999888777643210 00000
Q ss_pred HHHHHHHHHhhhhcccccCCCCCC-chhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhh
Q 015916 179 AIVPFVVCLGAIFFLRETTPASTV-DEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAI 257 (398)
Q Consensus 179 ~~~~~~i~~~~~~~l~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~ 257 (398)
.+..|..... .+....+||..+...+.+.++.. ++.
T Consensus 167 --------------~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~------------------------~~~----- 203 (410)
T TIGR00885 167 --------------DKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVA------------------------LLI----- 203 (410)
T ss_pred --------------hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HHH-----
Confidence 0000000000 00123457665533322111000 000
Q ss_pred ccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHH
Q 015916 258 PVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWIL 337 (398)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l 337 (398)
. +. + .|+.+ + +++ + + ++. ..+.++.+|+|++|..
T Consensus 204 ~----~~-~---~p~~~----~---~~~-------------------~--------~--~~~--~~~~~~~~~~~~~~~~ 237 (410)
T TIGR00885 204 M----LT-K---MPALN----H---SDA-------------------K--------Q--ISF--SASLSRLARIRHYREG 237 (410)
T ss_pred H----Hh-c---CCCCC----c---ccc-------------------c--------c--ccc--hhhHHHHHhChhHHHH
Confidence 0 01 0 11000 0 000 0 0 000 0134578899999998
Q ss_pred HHHHHhcccceeeeeechHHHHHHhCC--Cc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 338 FVSFLCGVGTGLAVMNNMGQIGLALGY--VD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 338 ~~~~~~~~~~g~~~~~n~~~i~~~~g~--~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
.+..++..+...+..++++.+.++.+. ++ ++...+.+-....+||+++|++.||+++|+
T Consensus 238 ~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~ 300 (410)
T TIGR00885 238 VIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK 300 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 888888878777777888888877643 22 344666666788999999999999998875
No 45
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.78 E-value=2.5e-17 Score=162.61 Aligned_cols=130 Identities=15% Similarity=0.053 Sum_probs=108.5
Q ss_pred ccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
+.+....|.+++++|.|..+.++..+...++... .++.|++.||+|||+.+.++.++..++.+.+... ++++
T Consensus 20 ~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~-------~~~~ 92 (392)
T PRK10473 20 DMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA-------ETSS 92 (392)
T ss_pred HHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh-------CcHH
Confidence 3444678999999999999999977777777755 7999999999999999999999999988887654 4577
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
.+++.|++.|++.+..+......+.+++| ++|+++.|+......+|..+.+.+...+.
T Consensus 93 ~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~ 151 (392)
T PRK10473 93 LFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM 151 (392)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888999999988877778888999998 57999999999888888877777665543
No 46
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.77 E-value=3.4e-17 Score=162.51 Aligned_cols=249 Identities=12% Similarity=0.009 Sum_probs=161.4
Q ss_pred cHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHH
Q 015916 36 YSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVF 114 (398)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~ 114 (398)
+.+++.+++|+|.++.+++.+...++... .++.|++.||+|||+++..+.++..++.+++... ... ..+++.+++.
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~--~~~-~~~~~~l~~~ 111 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVF--GLG-HANYPLILLF 111 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH--hcc-CccHHHHHHH
Confidence 45667788999999999977777777654 8999999999999999999999998886654221 000 1356777788
Q ss_pred HHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHH-HHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhc
Q 015916 115 LCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTA-IFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFF 192 (398)
Q Consensus 115 ~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~-i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 192 (398)
|++.|+|.+.........+.+++| ++||+++|+..++.++|.. +.+.+...+.+...++
T Consensus 112 ~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~------------------- 172 (402)
T TIGR00897 112 YGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEM------------------- 172 (402)
T ss_pred HHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchH-------------------
Confidence 999999887665555666778876 6799999999999988864 4455544443311100
Q ss_pred ccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhccccccccccccccC
Q 015916 193 LRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNRKR 272 (398)
Q Consensus 193 l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~ 272 (398)
...|+... .. . +...+... +.++. ++++
T Consensus 173 --------------~~~~~~~~--~~----------------------------~---~~~~~~~~----~~~~~-~~~~ 200 (402)
T TIGR00897 173 --------------NTLWSALA--FV----------------------------L---TGGVIALF----SNKDI-FTPQ 200 (402)
T ss_pred --------------HHHHHHHH--HH----------------------------H---HHHHHHHh----ccCCC-CCcc
Confidence 01121110 00 0 00000000 11110 0010
Q ss_pred CCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccceeeee
Q 015916 273 TEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLAVM 352 (398)
Q Consensus 273 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g~~~~ 352 (398)
. .+++ ++. + +. ....++++|+|.+|...+..++......+..
T Consensus 201 ~--------~~~~-------------------~~~------~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
T TIGR00897 201 H--------MQTR-------------------EKF------S---EL--GKAATILFTNPNVLLGGMVRIINTIGLFGFA 242 (402)
T ss_pred c--------ccCC-------------------cch------h---hH--HHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 000 0 00 1134678999999998877776655555667
Q ss_pred echHHHHHHhCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 353 NNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 353 ~n~~~i~~~~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
+..+.+.++.|++. .....++..+++.+|+++.|+++||++||+
T Consensus 243 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 288 (402)
T TIGR00897 243 VFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN 288 (402)
T ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 78888888888863 456777888999999999999999999875
No 47
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.77 E-value=9e-17 Score=163.46 Aligned_cols=180 Identities=19% Similarity=0.215 Sum_probs=140.5
Q ss_pred CCcHHHHHHHHHHHHHhcc-cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHH
Q 015916 11 AGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEG 88 (398)
Q Consensus 11 ~~~w~~l~~~~~~~~~~g~-~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (398)
+++|..+....+..+..+. .+..+...|.+++++|+|..+.+++.+...++... +++.|++.||+|+|+++.++.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 3456655555554444443 34445677889999999999999976666777755 799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 89 LVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 89 ~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
+++.+++.+. .+++.+++.+++.|++.+..+......+.+++|+ +|+++.++...+..+|..+.+.+...+.
T Consensus 96 ~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 168 (496)
T PRK03893 96 SVGTLACGFA-------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV 168 (496)
T ss_pred HHHHHHHHHH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9998887764 4688888899999999888888888889999985 6999999999999999999999988888
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhhcccccC
Q 015916 168 ADDPAKFLFMLAIVPFVVCLGAIFFLRETT 197 (398)
Q Consensus 168 ~~~~~~~~~~~~~~~~~i~~~~~~~l~~~p 197 (398)
+...|++.+.++.++.++.+.....+|+.+
T Consensus 169 ~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~ 198 (496)
T PRK03893 169 PVWGWRALFFIGILPIIFALWLRKNLPEAE 198 (496)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHhCCCch
Confidence 777788877776666555444433444433
No 48
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.77 E-value=2.2e-17 Score=163.77 Aligned_cols=129 Identities=16% Similarity=0.083 Sum_probs=104.9
Q ss_pred ccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHH
Q 015916 33 FSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (398)
Q Consensus 33 ~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l 111 (398)
+....|++++++|+|..+.++..+...++..+ .++.|++.||+|+|+++.++.++..++.+...+. ++++.+
T Consensus 32 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-------~~~~~l 104 (406)
T PRK15402 32 IQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA-------QSIEQF 104 (406)
T ss_pred HhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-------ccHHHH
Confidence 33455778899999999999976777777755 7999999999999999999999999888877654 467788
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 112 CVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
++.|++.|++.+.........+.+++|+ +|+++.++......++..+.+.+...+.+
T Consensus 105 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 162 (406)
T PRK15402 105 TLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH 162 (406)
T ss_pred HHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999998887666777888999986 58888998888777887777777665543
No 49
>PRK10133 L-fucose transporter; Provisional
Probab=99.77 E-value=4.6e-17 Score=163.42 Aligned_cols=149 Identities=11% Similarity=0.044 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHhcc-cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHH
Q 015916 14 WLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVG 91 (398)
Q Consensus 14 w~~l~~~~~~~~~~g~-~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig 91 (398)
+..++..+++.+..+. ....+.+.|.+++++|+|..+.++..+...++..+ +++.|++.||+|+|+++.++.+++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~ 104 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALG 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 3333333333333443 34556788999999999999999987777788765 899999999999999999999999999
Q ss_pred HHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccC-CcchHHHHHhhhhhhHHHHHHHHHhH
Q 015916 92 YGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGYVGLSTAIFTDLCSAL 166 (398)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~ 166 (398)
.+++..... +++++.+++.|+++|+|.+...++....+.++.|++ |+..+++.++.+++|..+.+.+...+
T Consensus 105 ~~l~~~~~~----a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 105 AALFWPAAE----IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHh----cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 987642211 146888889999999999998888888888887765 55689999999999998888776554
No 50
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.77 E-value=1.4e-17 Score=161.28 Aligned_cols=132 Identities=11% Similarity=0.025 Sum_probs=108.3
Q ss_pred ccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Q 015916 35 NYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~ 113 (398)
...|.+..+++.+..+.+++.+...++..+ .++.|++.||+|||+++.++.++..++.++..+..... +.+++.+++
T Consensus 20 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 97 (365)
T TIGR00900 20 VALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLG--GLNIWQVYV 97 (365)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcC--CCcHHHHHH
Confidence 344567778899999999987777777754 89999999999999999999998888877766542110 126888888
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 114 FLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
.+++.|++.+...++....+.+++|+ +|+++.|+...+.++|..+.+.+...+.+
T Consensus 98 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 153 (365)
T TIGR00900 98 LAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA 153 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998878888889999985 69999999999999999988888776543
No 51
>PRK15075 citrate-proton symporter; Provisional
Probab=99.76 E-value=4.5e-17 Score=163.26 Aligned_cols=146 Identities=13% Similarity=-0.012 Sum_probs=106.8
Q ss_pred CcHHHHHHHHHHHHHhcc-cccccccHHHHHHHcCCChhhHHH-HHHHHHhhh-----h-hhhhhhhhhcccCchHHHHH
Q 015916 12 GKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNN-LSVVKDIGK-----A-FGLLAGLASDRIPAPIILLI 83 (398)
Q Consensus 12 ~~w~~l~~~~~~~~~~g~-~~~~s~~~~~l~~~~g~s~~~~~~-i~~~~~~~~-----~-~~~~~G~l~Dr~G~r~~~~~ 83 (398)
.||+.....++..+.... ...++...|.++++++.+..+.+. ..+....+. . .+++.|++.||+|||++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 91 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIV 91 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHH
Confidence 355554444444444333 356778899999999998877654 332222221 2 25788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCchHH--------HHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhh
Q 015916 84 GSLEGLVGYGAQWLVVSRKIQPLSYW--------QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGL 154 (398)
Q Consensus 84 g~~~~~ig~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~gl 154 (398)
+.++..++.++++++ ++++ .++++|++.|++.+.........+.+|+|+ +||+++++...+..+
T Consensus 92 ~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~ 164 (434)
T PRK15075 92 TLSIMASGTLLIAFV-------PGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQV 164 (434)
T ss_pred HHHHHHHHHHHHHhC-------CcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHH
Confidence 999999998888764 3444 356789999999988777777889999984 699999999888777
Q ss_pred hHHHHHHHHH
Q 015916 155 STAIFTDLCS 164 (398)
Q Consensus 155 g~~i~~~l~~ 164 (398)
|..+.+.+..
T Consensus 165 g~~~g~~~g~ 174 (434)
T PRK15075 165 AVVFAALLGY 174 (434)
T ss_pred HHHHHHHHHH
Confidence 7666655543
No 52
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.75 E-value=1.1e-17 Score=161.52 Aligned_cols=129 Identities=22% Similarity=0.230 Sum_probs=108.6
Q ss_pred ccccHH-HHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHH
Q 015916 33 FSNYSD-ALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (398)
Q Consensus 33 ~s~~~~-~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~ 110 (398)
+....| .+++++|+|..+++++.+...++.. .+++.|++.||+|+|+++.++.++.+++.++..++ ++.+.
T Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-------~~~~~ 87 (352)
T PF07690_consen 15 ISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA-------SNFWL 87 (352)
T ss_dssp HHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH-------CCHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh-------hhHHH
Confidence 344556 7889999999999997777777765 48999999999999999999999999995555543 35667
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
+++.+++.|++.+.........+.+++|+ +|+++.|+...+.++|..+.+.+...+.+
T Consensus 88 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 146 (352)
T PF07690_consen 88 LLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS 146 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred Hhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh
Confidence 77899999999988888899999999996 79999999999999999999888877653
No 53
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.75 E-value=5.7e-17 Score=158.82 Aligned_cols=129 Identities=11% Similarity=0.031 Sum_probs=109.2
Q ss_pred cccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHH
Q 015916 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (398)
Q Consensus 32 ~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~ 110 (398)
.+....|.+.+++|+|..+.+++.+...++... .++.|++.||+|||+++..+.++..++.+.+.+. ++++.
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~-------~~~~~ 81 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA-------QTIDQ 81 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-------ccHHH
Confidence 344567888899999999999977777777755 7999999999999999999999999998887764 46777
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
+++.+++.|++.+.........+.+++|+ +|+++.++...+..+|..+.+.+...+.
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 139 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLL 139 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999887777778889999985 6999999999999999888888776554
No 54
>PRK09952 shikimate transporter; Provisional
Probab=99.75 E-value=9.6e-17 Score=161.13 Aligned_cols=146 Identities=10% Similarity=0.051 Sum_probs=105.1
Q ss_pred CcHHHHHHHHHHHHHhcc-cccccccHHH-HHHHc--CCChhhHHHHHH-----HHHhhhhh-hhhhhhhhcccCchHHH
Q 015916 12 GKWLGFVTAVWVQAISGN-NYTFSNYSDA-LKTLM--NLTQLELNNLSV-----VKDIGKAF-GLLAGLASDRIPAPIIL 81 (398)
Q Consensus 12 ~~w~~l~~~~~~~~~~g~-~~~~s~~~~~-l~~~~--g~s~~~~~~i~~-----~~~~~~~~-~~~~G~l~Dr~G~r~~~ 81 (398)
++|..+..+++...+.+. ...++...|. +.+++ +.++. .+++.. ...++..+ +++.|++.||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 445555555555444443 3455556664 45555 67766 344322 22233433 68899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCchHH--------HHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhh
Q 015916 82 LIGSLEGLVGYGAQWLVVSRKIQPLSYW--------QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYV 152 (398)
Q Consensus 82 ~~g~~~~~ig~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~ 152 (398)
.++.++++++.++++++ ++++ .+.++|+++|++.|..+.....++.||+|+ +||+..+....+.
T Consensus 98 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~ 170 (438)
T PRK09952 98 MLTVWMMGIATALIGLL-------PSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGY 170 (438)
T ss_pred HHHHHHHHHHHHHHhcC-------CcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHH
Confidence 99999999998888764 3443 466789999999998888888899999985 6999999999998
Q ss_pred hhhHHHHHHHHHh
Q 015916 153 GLSTAIFTDLCSA 165 (398)
Q Consensus 153 glg~~i~~~l~~~ 165 (398)
.+|..+...+...
T Consensus 171 ~~G~~l~~~~~~~ 183 (438)
T PRK09952 171 GVGLLLSTGLVSL 183 (438)
T ss_pred HHHHHHHHHHHHH
Confidence 8888777665544
No 55
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.74 E-value=1.4e-16 Score=156.77 Aligned_cols=129 Identities=19% Similarity=0.145 Sum_probs=108.2
Q ss_pred cccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHH
Q 015916 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (398)
Q Consensus 32 ~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~ 110 (398)
....+.|.+++++|+|..+++++.+...++..+ .++.|++.||+|+|+++.++.++..++.+...+. ++++.
T Consensus 24 ~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~-------~~~~~ 96 (381)
T PRK03633 24 VLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLM-------VGFWS 96 (381)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccHHH
Confidence 345678889999999999999987877888765 7999999999999999999999999988877654 46888
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
+.+.|++.|++.+...+.....+.++.| ++||++.|+...+..+|..+.+.+...+.
T Consensus 97 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 154 (381)
T PRK03633 97 WLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVS 154 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 8889999999998766555556666665 57999999999999999998888876654
No 56
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.74 E-value=4.2e-17 Score=163.51 Aligned_cols=253 Identities=12% Similarity=0.109 Sum_probs=186.5
Q ss_pred HHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHh
Q 015916 41 KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGG 119 (398)
Q Consensus 41 ~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G 119 (398)
+.+++|+..|-+++.+....|.++ .+++|+++||+|.|+++..+.++.+++.++.-.+.. .+++.+++.|+++|
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~-----~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAAS-----IGFYLLLVLRFLQG 139 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH-----hcchhhHHHHHHhH
Confidence 457999999999988888899977 689999999999999999999999999988876643 34566677999999
Q ss_pred hhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcCC-ChhHHHHHHHHH-HHHHHHhhhhccccc
Q 015916 120 NSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIV-PFVVCLGAIFFLRET 196 (398)
Q Consensus 120 ~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~~~~~~~~-~~~i~~~~~~~l~~~ 196 (398)
++.|..+++.....++|.| ++|++..+++.++..+|..+.-++.+.+.+. .+|+..+++... ..+..++..++.++.
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDS 219 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999998888888999998 5799999999999999999999998888765 334333332222 222222222222333
Q ss_pred CCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhccccccccccccccCCCCC
Q 015916 197 TPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNRKRTEPD 276 (398)
Q Consensus 197 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~ 276 (398)
|.+ ++.
T Consensus 220 P~~--------------------------------------------------------------------------h~~ 225 (466)
T KOG2532|consen 220 PSK--------------------------------------------------------------------------HPN 225 (466)
T ss_pred ccc--------------------------------------------------------------------------CCC
Confidence 322 111
Q ss_pred cchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccceeeeeechH
Q 015916 277 VEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMG 356 (398)
Q Consensus 277 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~ 356 (398)
+.++|. +- - +.+ .. ++....+....++++++++.+|.++++.++........+..+|
T Consensus 226 is~~El-~~--------------I----~~~--k~--~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~P 282 (466)
T KOG2532|consen 226 ISEKEL-KY--------------I----EKG--KS--EAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLP 282 (466)
T ss_pred CCHHHH-HH--------------H----Hhc--cc--ccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 100000 00 0 000 00 0000111356789999999999999999999888888999999
Q ss_pred HHHHH-hCCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhH
Q 015916 357 QIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKM 395 (398)
Q Consensus 357 ~i~~~-~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~ 395 (398)
.+.++ ++++ +.+.+.++=-+...+-++++|.++||+.+|
T Consensus 283 tY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~ 324 (466)
T KOG2532|consen 283 TYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR 324 (466)
T ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 98887 4765 577888999999999999999999999885
No 57
>PRK12382 putative transporter; Provisional
Probab=99.74 E-value=2.6e-16 Score=155.30 Aligned_cols=164 Identities=13% Similarity=-0.031 Sum_probs=113.9
Q ss_pred cccCCCCCCcHHHHHHHHHHHH-Hh--cccccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchH
Q 015916 4 EVSYTSSAGKWLGFVTAVWVQA-IS--GNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPI 79 (398)
Q Consensus 4 ~~~~~~~~~~w~~l~~~~~~~~-~~--g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~ 79 (398)
.+|.|+.+++|........... .. +.....+.....+++++|+|..+++++.+...++..+ +++.|++.||+|||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~ 82 (392)
T PRK12382 3 AVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKR 82 (392)
T ss_pred ccccCcCCCcccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchH
Confidence 3577777776654433333221 11 1111222232346889999999999977777777754 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-cccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHH
Q 015916 80 ILLIGSLEGLVGYGAQWLVVS-RKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTA 157 (398)
Q Consensus 80 ~~~~g~~~~~ig~~~~~~~~~-~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~ 157 (398)
++.++.+...++.+....... ......+++.+++.|++.|++.+...++....+.+++| ++|++++|+...+..+|..
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~ 162 (392)
T PRK12382 83 SALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALA 162 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHH
Confidence 999998877765443222100 00001357778889999999998777777778889998 5799999999888888888
Q ss_pred HHHHHHHhHc
Q 015916 158 IFTDLCSALF 167 (398)
Q Consensus 158 i~~~l~~~~~ 167 (398)
+.+++...+.
T Consensus 163 ~g~~~~~~l~ 172 (392)
T PRK12382 163 AGAPLGLLLH 172 (392)
T ss_pred HHHHHHHHHH
Confidence 8887766554
No 58
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.73 E-value=3.1e-16 Score=155.07 Aligned_cols=131 Identities=12% Similarity=-0.012 Sum_probs=102.2
Q ss_pred HHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHh-cccCCchHHHHHHHH
Q 015916 38 DALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVS-RKIQPLSYWQMCVFL 115 (398)
Q Consensus 38 ~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~-~~~~~~~~~~l~~~~ 115 (398)
..+++++|+|..+++++.+...++..+ +++.|++.||+|||+++..+.++.+++...+.+... +.....+++.+++.|
T Consensus 40 ~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 119 (399)
T PRK05122 40 GYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGR 119 (399)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHH
Confidence 346889999999999987777777754 899999999999999999999988877665544321 100012456677899
Q ss_pred HHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 116 CMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 116 ~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
++.|++.+.........+.+++| ++|+++.|+...+..+|..+.+++...+.+
T Consensus 120 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 173 (399)
T PRK05122 120 LLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH 173 (399)
T ss_pred HHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 99999999877777777888887 579999999888888887777777766543
No 59
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.69 E-value=2.1e-15 Score=146.78 Aligned_cols=129 Identities=11% Similarity=-0.095 Sum_probs=95.9
Q ss_pred cccHHHHHHHcCCChhhHHHHHHHHHhhhhhhhhhhhhhccc-----CchHHH-HHHHHHHHHHHHHHHHHHhcccCCch
Q 015916 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRI-----PAPIIL-LIGSLEGLVGYGAQWLVVSRKIQPLS 107 (398)
Q Consensus 34 s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~-----G~r~~~-~~g~~~~~ig~~~~~~~~~~~~~~~~ 107 (398)
+...|.+.+++|+|.+|+++........ ...++.|++.||+ ||||.+ +.+.++.++....+++... ..+
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~-~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~----~~~ 82 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLVGLPY-SLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP----STD 82 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc----chh
Confidence 3456778899999999999976553333 3489999999998 899974 5666666666655554311 134
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
++.+....++.+...+....+....+.+++| ++|+++.|+...+..+|..+.+.+...+.
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 143 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLA 143 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5666666666677777666777888999997 57999999999999999888888776554
No 60
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.68 E-value=2.8e-15 Score=146.36 Aligned_cols=124 Identities=15% Similarity=0.040 Sum_probs=87.7
Q ss_pred HHHHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcccCchHHHHH-HHHHHHHHHHHHHHHHhcccCCchHHHHHHHH
Q 015916 38 DALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPAPIILLI-GSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFL 115 (398)
Q Consensus 38 ~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~~-g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~ 115 (398)
+.+++++|+|..+++++.+...+.. +.+++.|++.||+|+|+.+++ +.+...++.++.+++ ++++.+++.+
T Consensus 22 ~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~~ 94 (375)
T TIGR00899 22 LFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN-------RNYFLLLVLG 94 (375)
T ss_pred HHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc-------chHHHHHHHH
Confidence 3468899999999999766666655 458999999999999987665 444445555555543 4677777778
Q ss_pred HHHhhhhhhhhhHHHHHHHHhhcc-CCcch--HHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 116 CMGGNSTTWMNTAVLVTCIRNFRR-NRGPV--SGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 116 ~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a--~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
++.|.+.+...+.......++.|+ +|+.+ .++...+.++|..+.+++...+.+
T Consensus 95 ~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~ 150 (375)
T TIGR00899 95 VLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL 150 (375)
T ss_pred HHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH
Confidence 777766555444445556677764 35544 577777788898888888776643
No 61
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.68 E-value=3.4e-15 Score=148.78 Aligned_cols=130 Identities=19% Similarity=0.091 Sum_probs=106.2
Q ss_pred ccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
..+..-.|.+.++++.+..+.++..+...++.. ..++.|++.||+|||++++.+.++..++.+.+.++ ++++
T Consensus 33 ~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-------~~~~ 105 (413)
T PRK15403 33 DLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT-------TSMT 105 (413)
T ss_pred HhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc-------CCHH
Confidence 344445677899999999999996666667665 47999999999999999999999999888877654 5688
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
.+++.|+++|++.+.........+.+++|+ +|++++++......+|..+.+.+...+.
T Consensus 106 ~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~ 164 (413)
T PRK15403 106 QFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM 164 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999998886555666778899985 5899999999999999888877765544
No 62
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.68 E-value=4.6e-15 Score=146.55 Aligned_cols=130 Identities=12% Similarity=0.035 Sum_probs=105.6
Q ss_pred ccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
+.+....|++.+++|+|..+.+++.+...++..+ .++.|++.||+|||+++.++.++..++.+...+. ++++
T Consensus 25 ~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~-------~~~~ 97 (394)
T PRK11652 25 TIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA-------HSLT 97 (394)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-------ccHH
Confidence 3444556888999999999999977777777765 7999999999999999999999998888877653 4678
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
.+++.|++.|++.+...........++++ ++|+.+.++...+..++..+.+.+...+.
T Consensus 98 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 156 (394)
T PRK11652 98 VLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLT 156 (394)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999888766666667778887 46899999988888888878777766554
No 63
>PRK10054 putative transporter; Provisional
Probab=99.67 E-value=1.5e-15 Score=150.37 Aligned_cols=151 Identities=12% Similarity=0.065 Sum_probs=107.6
Q ss_pred CCCCCcHHHHHHHHHHHHHhcccccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHH
Q 015916 8 TSSAGKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSL 86 (398)
Q Consensus 8 ~~~~~~w~~l~~~~~~~~~~g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~ 86 (398)
+.+++.|..++..++... +....++.+.+.+++++|+|..+++++.+...+... ..++.|++.||+|+|+++.++.+
T Consensus 4 ~~~~~~~~l~~~~~~~~~--g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~ 81 (395)
T PRK10054 4 SLRRSTSALLASSLLLTI--GRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAIT 81 (395)
T ss_pred CCCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHH
Confidence 444444544443333322 222233445556788999999999997666666554 58999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHh
Q 015916 87 EGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSA 165 (398)
Q Consensus 87 ~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~ 165 (398)
...++++...+. ++++.+++.+.+.|.+.+...........+.+|+ +|+++.|+......+|.++.+.+...
T Consensus 82 ~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~ 154 (395)
T PRK10054 82 AFASGFIAIPLV-------NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTL 154 (395)
T ss_pred HHHHHHHHHHHH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888877654 4566666667676665554444455556677764 69999999999999999999888766
Q ss_pred Hc
Q 015916 166 LF 167 (398)
Q Consensus 166 ~~ 167 (398)
+.
T Consensus 155 l~ 156 (395)
T PRK10054 155 LV 156 (395)
T ss_pred HH
Confidence 53
No 64
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.67 E-value=1.9e-15 Score=147.77 Aligned_cols=128 Identities=13% Similarity=-0.018 Sum_probs=93.9
Q ss_pred ccccccHHHHHHHcC--CChhhHHHHHHHHH-----hhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcc
Q 015916 31 YTFSNYSDALKTLMN--LTQLELNNLSVVKD-----IGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRK 102 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g--~s~~~~~~i~~~~~-----~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~ 102 (398)
+.++...+.+.+++. .++.+.+...+... ++.. .+++.|++.||+|||+++.++.++..++.+++.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~---- 85 (394)
T TIGR00883 10 YLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLL---- 85 (394)
T ss_pred HHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhC----
Confidence 445556666766654 44555555322221 2222 36899999999999999999999999998887764
Q ss_pred cCCchH--------HHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHh
Q 015916 103 IQPLSY--------WQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSA 165 (398)
Q Consensus 103 ~~~~~~--------~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~ 165 (398)
+++ +.+++.|++.|++.+.........+.+++| ++||++.++...+..+|..+.+.+...
T Consensus 86 ---~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~ 154 (394)
T TIGR00883 86 ---PSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLL 154 (394)
T ss_pred ---CChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 235668999999998877778888999998 479999999999988888887766543
No 65
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.67 E-value=3.8e-15 Score=152.61 Aligned_cols=263 Identities=18% Similarity=0.112 Sum_probs=186.2
Q ss_pred hhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhh
Q 015916 49 LELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNT 127 (398)
Q Consensus 49 ~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~ 127 (398)
.+.+++.+...++... ++++|++.|++|||++++++.+++.+|.++++++ .+++.+.++|++.|+|.|....
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a-------~~~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA-------PSWYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHhccchhhhhh
Confidence 3457888888888865 7999999999999999999999999999999886 5788999999999999999888
Q ss_pred HHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCC--hhHHHHHHHHHHHHHHHhhhhcccccCCCCCCch
Q 015916 128 AVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADD--PAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDE 204 (398)
Q Consensus 128 ~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~ 204 (398)
....++++.-|+ .||...++......+|..+. .+.+...++. .|+..+.++.+|+++..++.+++||.|+++...+
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g 240 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKG 240 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcC
Confidence 888889999996 59999999999988665554 6666666554 7999999999999999999999999999876533
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhccccccccccccccCCCCCcchhhccc
Q 015916 205 EKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVE 284 (398)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (398)
+.++..+... . ++..+ +. |.++ +.+
T Consensus 241 ~~~~a~~~l~----------~-------------------------------------l~g~~----~~--~~~~--~~~ 265 (513)
T KOG0254|consen 241 RLEEAKRSLK----------R-------------------------------------LRGLS----PE--DVEV--ELE 265 (513)
T ss_pred ChHHHHHHHH----------H-------------------------------------HhCCC----Cc--chHH--HHH
Confidence 3233322100 0 11000 00 0000 000
Q ss_pred CCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHH----HhccHhHHHHHHHHHhcccceeeeeechHHHHH
Q 015916 285 PLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFE----AMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGL 360 (398)
Q Consensus 285 ~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~----~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~ 360 (398)
.+ +.++..+.. . ...+...++ ..+++.++...+..+-.......++...+++.+
T Consensus 266 ~~------------~~~~~~~~~------~----~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~ 323 (513)
T KOG0254|consen 266 LL------------KIKLLVEAE------V----AEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFK 323 (513)
T ss_pred HH------------HHHHHHhhh------c----ccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHH
Confidence 00 000000000 0 000111222 334445555666555555555678888899999
Q ss_pred HhCCCch-hHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 361 ALGYVDV-SIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 361 ~~g~~~~-a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
+.|.++. .....+.++.|.++-++..++.||++||.
T Consensus 324 ~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ 360 (513)
T KOG0254|consen 324 SAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRK 360 (513)
T ss_pred hcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 9998754 67778889999999999999999999986
No 66
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.65 E-value=2.2e-16 Score=164.99 Aligned_cols=134 Identities=16% Similarity=0.071 Sum_probs=110.1
Q ss_pred cccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHH--hccc-------
Q 015916 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVV--SRKI------- 103 (398)
Q Consensus 34 s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~--~~~~------- 103 (398)
+...++++++|+++.++.+++.+...++..+ .++.|++.||+|||+.+.+|.+++++|.+++++.- .+..
T Consensus 53 ~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 53 NSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred HhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 4556889999999999999988888888865 79999999999999999999999999999887541 0000
Q ss_pred ---------------------------------C--CchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHH
Q 015916 104 ---------------------------------Q--PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGI 147 (398)
Q Consensus 104 ---------------------------------~--~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi 147 (398)
. +..+..+++.|++.|+|.+..++....++.+|+|+ +|++.+|+
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 0 01234556789999999999888889999999985 69999999
Q ss_pred HHhhhhhhHHHHHHHHHhHc
Q 015916 148 LKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 148 ~~~~~glg~~i~~~l~~~~~ 167 (398)
..++..+|..+.+.+.+.+.
T Consensus 213 ~~~~~~iG~~lG~llgg~l~ 232 (633)
T TIGR00805 213 LESIAVFGPAFGYLLGSFCL 232 (633)
T ss_pred HHHHHHhhhHHHHHHHHHHH
Confidence 99999999888877766654
No 67
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.65 E-value=3.7e-15 Score=148.43 Aligned_cols=133 Identities=17% Similarity=0.056 Sum_probs=105.0
Q ss_pred cccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHH
Q 015916 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (398)
Q Consensus 34 s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~ 112 (398)
....|.+.++++.+..+.+++.....++... +++.|++.||+|||+++.++.++.++++......... ..++++.++
T Consensus 37 ~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ 114 (417)
T PRK10489 37 GVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL--PEPSLLAIY 114 (417)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc--CCCcHHHHH
Confidence 3456777788888999999987777788765 7999999999999999999988888877665432110 114577777
Q ss_pred HHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 113 VFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
+.+++.|++.+....+....+.+++|+ +|+++.++.....++|..+.+.+...+.+
T Consensus 115 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~ 171 (417)
T PRK10489 115 LLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA 171 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH
Confidence 889999988887766777788899985 69999999998899998888888776543
No 68
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.65 E-value=1e-14 Score=144.24 Aligned_cols=129 Identities=13% Similarity=-0.010 Sum_probs=99.5
Q ss_pred cccccHHHHHHHcCCChhhH-----HHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 015916 32 TFSNYSDALKTLMNLTQLEL-----NNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQP 105 (398)
Q Consensus 32 ~~s~~~~~l~~~~g~s~~~~-----~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~ 105 (398)
.+..+.|.+.+++|++..+. +++.+...++.. ..++.|++.||+|+|+++..+.++.+++.+++.+.
T Consensus 32 ~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------- 104 (408)
T PRK09874 32 LVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA------- 104 (408)
T ss_pred HhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHH-------
Confidence 34556788888899987653 555555555554 47999999999999999999999888888776653
Q ss_pred chHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
++++.+++.+++.|++.+. +......+.+++| ++||++.|+...+..+|..+.+.+...+.+
T Consensus 105 ~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 167 (408)
T PRK09874 105 QNIWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD 167 (408)
T ss_pred hhHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678888889998887654 3455566778887 579999999999988998888888766543
No 69
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.65 E-value=1.5e-14 Score=138.94 Aligned_cols=132 Identities=23% Similarity=0.183 Sum_probs=114.3
Q ss_pred cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Q 015916 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 30 ~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~ 108 (398)
.+.++...|.+.+++|.+..+.+++.....++... .++.|++.||+|||+.+.++.++..++.+...+. +++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 87 (352)
T cd06174 15 RGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA-------SSL 87 (352)
T ss_pred hhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh-------ccH
Confidence 34566777888889999999999987777777755 8999999999999999999999999999887764 467
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
+.+++.+++.|++.+...........+++|+ +|+++.++.....++|..+.+.+...+.+
T Consensus 88 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 148 (352)
T cd06174 88 WLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE 148 (352)
T ss_pred HHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888899999999998888888899999996 79999999999999999999888777654
No 70
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.65 E-value=1.4e-14 Score=143.73 Aligned_cols=147 Identities=17% Similarity=0.200 Sum_probs=116.2
Q ss_pred CcHHHHHHHHHHHHHhcccccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHH
Q 015916 12 GKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLV 90 (398)
Q Consensus 12 ~~w~~l~~~~~~~~~~g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~i 90 (398)
.+|..+...++.... ....++...+.+++++|+|..+++++.....+... .+++.|++.||+|+|+++.++.++..+
T Consensus 11 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~ 88 (400)
T PRK11646 11 GKYFLLIDNMLVVLG--FFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAA 88 (400)
T ss_pred cHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHH
Confidence 345555555554433 23345566666889999999999997666556654 589999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 91 GYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 91 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
+.+.+.+. ++++.+++.+++.|++.+...++....+.+++| ++||++.|+......+|..+.+.+...+.
T Consensus 89 ~~~~~~~~-------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~ 159 (400)
T PRK11646 89 GFATMAIA-------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL 159 (400)
T ss_pred HHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98887653 467888888999999888766666777889997 57999999999999999999988877664
No 71
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.63 E-value=2.2e-14 Score=146.06 Aligned_cols=130 Identities=17% Similarity=0.022 Sum_probs=98.9
Q ss_pred cccHHHHHHHcCCChhhHHHHHHHHHhhhhhhhhhhhhhccc-----CchHH-HHHHHHHHHHHHHHHHHHHhcccCCch
Q 015916 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRI-----PAPII-LLIGSLEGLVGYGAQWLVVSRKIQPLS 107 (398)
Q Consensus 34 s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~-----G~r~~-~~~g~~~~~ig~~~~~~~~~~~~~~~~ 107 (398)
+...|.+.++.|.+.++++.++... ......++.|++.||+ |||+. +.++.+...++...+++. . +..+
T Consensus 32 ~~~l~~~l~~~g~~~~~ig~~~~~~-~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~--~--~~~~ 106 (491)
T PRK11010 32 SGTLQAWMTVENIDLKTIGFFSLVG-QAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFL--E--PGTQ 106 (491)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHc--C--Ccch
Confidence 4456677778899999999864433 2234689999999999 99986 657777776777666553 1 1145
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
++.+.+.+++.+++.+....+...+..+|+| ++||++.++...+..+|..+.+.+...+.+
T Consensus 107 l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~ 168 (491)
T PRK11010 107 LRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLAD 168 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777778888888888777788888999998 579999999999999998888777666543
No 72
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.62 E-value=3.2e-14 Score=140.86 Aligned_cols=124 Identities=14% Similarity=0.035 Sum_probs=102.6
Q ss_pred ccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Q 015916 35 NYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~ 113 (398)
...+++.++++.+..+.+++.....+... ++|+.|++.||+|||++++++.++..++.+.+.+. .+. .+
T Consensus 24 ~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~-------~~~---~~ 93 (393)
T PRK11195 24 FAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG-------IHP---LL 93 (393)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH-------HHH---HH
Confidence 33455678899999999997777777765 58999999999999999999999998887766543 222 56
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 114 FLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
.|+++|++.+..+++....+.+++|+ +|++++|+......+|..+.+.+.+.+.+
T Consensus 94 ~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~ 149 (393)
T PRK11195 94 AYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD 149 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999998888889999999985 69999999999988888888888776653
No 73
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.61 E-value=2e-15 Score=146.36 Aligned_cols=146 Identities=18% Similarity=0.152 Sum_probs=119.9
Q ss_pred cHHHHHHHHHHHHHhcc-cccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHH
Q 015916 13 KWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLV 90 (398)
Q Consensus 13 ~w~~l~~~~~~~~~~g~-~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~i 90 (398)
.++.++.-++..+..-. -|+..-..+.+++++|++.++.+++.+...+... ++|++|.+.|||.||.++.+|..+..+
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTL 110 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHH
Confidence 34445544454443332 4666656788999999999999998887777765 589999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHh
Q 015916 91 GYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSA 165 (398)
Q Consensus 91 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~ 165 (398)
+.++.++. ..+|++.++|.+.|+|-+...+.+...+++.||+ +|+++.++...+...|+.+.-.+...
T Consensus 111 Av~~~~fs-------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~ 179 (493)
T KOG1330|consen 111 AVFASGFS-------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSV 179 (493)
T ss_pred HHHHHHHH-------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeee
Confidence 99999876 4699999999999999998888999999999995 79999999999888887665544433
No 74
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.61 E-value=1e-13 Score=132.65 Aligned_cols=274 Identities=16% Similarity=0.112 Sum_probs=190.5
Q ss_pred HHhccc-ccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcc
Q 015916 25 AISGNN-YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRK 102 (398)
Q Consensus 25 ~~~g~~-~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~ 102 (398)
...|.. -...+..|++++.|++++.|.+++..+...+... ++++|++.+|+|.|+.+++|..++++|+.+++-+...
T Consensus 23 fl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~- 101 (422)
T COG0738 23 FLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASS- 101 (422)
T ss_pred HHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhh-
Confidence 345543 3557899999999999999999988887777755 7999999999999999999999999999998744221
Q ss_pred cCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHH
Q 015916 103 IQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIV 181 (398)
Q Consensus 103 ~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~ 181 (398)
.++..++...++.|.|.+..-++++.++....|+ +...=+.+..+++++|+++.|.+.+.++..+ +.
T Consensus 102 ---~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~-~~-------- 169 (422)
T COG0738 102 ---KSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSG-VA-------- 169 (422)
T ss_pred ---hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh-hh--------
Confidence 3455566677889999999999999999999985 5778889999999999999999999876532 00
Q ss_pred HHHHHHhhhhcccccCCCCC-CchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhccc
Q 015916 182 PFVVCLGAIFFLRETTPAST-VDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVY 260 (398)
Q Consensus 182 ~~~i~~~~~~~l~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~ 260 (398)
..-.++... ........+++.|+..+. ..+++.... .
T Consensus 170 -----------~~~~~~~~~~~~~~~~~~v~~pYl~~~~--------------------------~lvll~v~~---~-- 207 (422)
T COG0738 170 -----------LTMSAAQILAIKGADASSVQFPYLILAG--------------------------LLVLLAVLI---L-- 207 (422)
T ss_pred -----------hccCHHHHHHHHHHHHHhhhhHHHHHHH--------------------------HHHHHHHHH---H--
Confidence 000000000 000011223333322211 010000000 0
Q ss_pred cccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHH
Q 015916 261 SFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVS 340 (398)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~ 340 (398)
+. + .|..+ +..| +. . +. .+.+..+++|+|++|.-.+.
T Consensus 208 --~~-k---~p~~~-------~~~~--------------------~~------~---~~-~~~~~~~l~~~~~~~~gvl~ 244 (422)
T COG0738 208 --LS-K---LPDLQ-------VAAP--------------------SL------G---AS-GSAGLSSLFQNKHLRLGVLA 244 (422)
T ss_pred --hc-c---CCcCC-------cccc--------------------cc------c---cc-ccchHHHHHhChHHHHHHHH
Confidence 11 0 11100 0011 00 0 01 12267899999999999999
Q ss_pred HHhcccceeeeeechHHHHHH-hCCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 341 FLCGVGTGLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 341 ~~~~~~~g~~~~~n~~~i~~~-~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
.++-.|...++-+.+++++.+ .|.+ +++.+++.+-++-.+||++.-++..|+...+
T Consensus 245 ~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k 303 (422)
T COG0738 245 IFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEK 303 (422)
T ss_pred HHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 999999999999999999999 6766 4778999999999999998888887876654
No 75
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.60 E-value=6.7e-14 Score=137.92 Aligned_cols=239 Identities=11% Similarity=-0.049 Sum_probs=154.9
Q ss_pred cHHHHHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcccCchHHH----HHHHHHHHHHHHHHHHHHhcccCCchHHH
Q 015916 36 YSDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPAPIIL----LIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (398)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~----~~g~~~~~ig~~~~~~~~~~~~~~~~~~~ 110 (398)
+.|.+.+++|+|.+|++++.+...+.. ..+++.|++.||+|+|+.. .++..+..+. .... .++++.
T Consensus 26 ~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~--~~~~-------~~~~~~ 96 (382)
T TIGR00902 26 FFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAA--FSAG-------AHNAWL 96 (382)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH--HHHh-------hhhHHH
Confidence 456778899999999999666655555 4589999999999985432 2322222221 1111 146888
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhh
Q 015916 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAI 190 (398)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 190 (398)
+++.+++.|.+.+...+.. ..+..+++++|+++.|......++|..+.+++.+.+.+
T Consensus 97 l~~~~~l~~~~~~~~~p~~-~al~~~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~---------------------- 153 (382)
T TIGR00902 97 LFIAIGLFALFFSAGMPIG-DALANTWQKQFGLDYGKVRLIGSAAFIIGSALFGGLIG---------------------- 153 (382)
T ss_pred HHHHHHHHHHHHccchhHH-HHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHH----------------------
Confidence 8888888877766544443 34456667889999999999999999999988887754
Q ss_pred hcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhccccccccccccc
Q 015916 191 FFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNR 270 (398)
Q Consensus 191 ~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~ 270 (398)
..+||..+.....+ .+ +.... .. ++++ .
T Consensus 154 ----------------~~g~~~~f~~~~~~--------------------------~~-~~~~~---~~---~~~~---~ 181 (382)
T TIGR00902 154 ----------------MFDEQNILAILTAG--------------------------LA-FMLIG---FL---IKPT---I 181 (382)
T ss_pred ----------------HcChhHHHHHHHHH--------------------------HH-HHHHH---HH---cCCC---C
Confidence 24555432111100 00 00000 00 1100 0
Q ss_pred cCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccceee
Q 015916 271 KRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLA 350 (398)
Q Consensus 271 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g~~ 350 (398)
++++ + ++ ++ ++ .+..+.++.+|+|+||.+.+..++..+....
T Consensus 182 ~~~~-------~-~~-------------------~~-------~~----~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~ 223 (382)
T TIGR00902 182 PPKD-------A-IP-------------------ED-------ES----QGDSAFIALLKNPMNLRFLAAVCLIQGAHAA 223 (382)
T ss_pred CCCc-------c-cc-------------------cc-------cc----ccchhHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 0000 0 00 00 00 0112467899999999999888887777777
Q ss_pred eeechHHHHHHhCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 351 VMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 351 ~~~n~~~i~~~~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
+.+..+.+.++.|.++ .....++..+...++.++.|.+.||+++|+
T Consensus 224 ~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~ 271 (382)
T TIGR00902 224 YYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARD 271 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHH
Confidence 8888888899999874 556777888899999999999999998875
No 76
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.60 E-value=6.3e-14 Score=138.05 Aligned_cols=239 Identities=13% Similarity=0.018 Sum_probs=151.6
Q ss_pred cHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCch----HHHHHHHHHHHHHHHHHHHHHhcccCCchHHH
Q 015916 36 YSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAP----IILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (398)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r----~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~ 110 (398)
+.|.+.+++|+|.++++++.+...+... .+++.|++.||+|+| +.+.++.....+ .... . ++++|.
T Consensus 26 ~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~---~~~~--~----~~~~~~ 96 (382)
T PRK11128 26 FWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAV---AFWF--G----AHSFWL 96 (382)
T ss_pred hHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHH---HHHH--h----cccHHH
Confidence 4456778899999999997666667665 489999999999984 333332222211 1111 1 146888
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhh
Q 015916 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAI 190 (398)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 190 (398)
+++.|.+.|.+.+........ ...+++++|+++.|.......+|..+.+++...+.+
T Consensus 97 l~i~~~l~g~~~~~~~~~~~a-~~~~~~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~---------------------- 153 (382)
T PRK11128 97 LFVAIGLFNLFFSPLVPLTDA-LANTWQKQIGLDYGKVRLWGSIAFVIGSALTGKLVS---------------------- 153 (382)
T ss_pred HHHHHHHHHHHHcccccHHHH-HHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHH----------------------
Confidence 888898888877755444444 444557789999999988889999999998887654
Q ss_pred hcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhccccccccccccc
Q 015916 191 FFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNR 270 (398)
Q Consensus 191 ~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~ 270 (398)
..+||..+...+. .. ..+....+ .+++ ++
T Consensus 154 ----------------~~g~~~~f~~~~~-----~~-------------------------~~~~~~~~---~~~~--~~ 182 (382)
T PRK11128 154 ----------------WFGEQAILWILTA-----GV-------------------------ASMLLGQL---LRPT--IM 182 (382)
T ss_pred ----------------HcChhHHHHHHHH-----HH-------------------------HHHHHHHH---ccCC--CC
Confidence 2455543321110 00 00000000 1100 00
Q ss_pred cCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccceee
Q 015916 271 KRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLA 350 (398)
Q Consensus 271 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g~~ 350 (398)
+++ ++ +++ .+ + ...+.++.+|++.+|.+.+..++.......
T Consensus 183 ~~~----------~~-------------------~~~------~~--~--~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~ 223 (382)
T PRK11128 183 PQG----------ES-------------------RQQ------ES--A--GWPAWKALLKEPTVWRFLLCVSLLQGSHAA 223 (382)
T ss_pred Ccc----------cc-------------------ccc------cc--c--ccchHHHHHcChhHHHHHHHHHHHHHHhHh
Confidence 000 00 000 00 0 123568999999999887766666555445
Q ss_pred eeechHHHHHHhCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 351 VMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 351 ~~~n~~~i~~~~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
+.+..+.+.++.|+++ .+...++..+...+++++.|++.||+++|+
T Consensus 224 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 271 (382)
T PRK11128 224 YYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARD 271 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Confidence 6667777888888874 456777888899999999999999998875
No 77
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.59 E-value=7.8e-14 Score=138.36 Aligned_cols=136 Identities=15% Similarity=0.071 Sum_probs=100.2
Q ss_pred hccccccc-ccHHHHHHHcCCChhhHHHHHHHHHhhhhhhhhhhhhhccc-----CchH-HHHHHHHHHHHHHHHHHHHH
Q 015916 27 SGNNYTFS-NYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRI-----PAPI-ILLIGSLEGLVGYGAQWLVV 99 (398)
Q Consensus 27 ~g~~~~~s-~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~-----G~r~-~~~~g~~~~~ig~~~~~~~~ 99 (398)
.|..+.+. --.|.+-++.|+|.+|++++...... ..+.++.|++.||+ |+|| .+.++.+..+++...+++..
T Consensus 11 ~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~ 89 (402)
T PRK11902 11 SGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCP 89 (402)
T ss_pred HhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcC
Confidence 34444443 23455666789999999998665544 45689999999999 8876 67777888877777765531
Q ss_pred hcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 100 SRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 100 ~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
. ..+++.+++..++.+...+...++....+.+++|+ +|+++.++...++++|..+.+.+...+.
T Consensus 90 ~----~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~ 154 (402)
T PRK11902 90 P----HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLA 154 (402)
T ss_pred c----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 1 13567676666666766666667778889999986 5999999999999999888888766554
No 78
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.59 E-value=3.5e-14 Score=140.13 Aligned_cols=162 Identities=15% Similarity=0.029 Sum_probs=139.5
Q ss_pred ccccccccHHHHHHHcCCChhh-HHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCc
Q 015916 29 NNYTFSNYSDALKTLMNLTQLE-LNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPL 106 (398)
Q Consensus 29 ~~~~~s~~~~~l~~~~g~s~~~-~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~ 106 (398)
..-..++..|++.+++|+|.+| .+.+..+...+..+ .+++|++.||+|+|+++.++.+...+..++..++ +
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa-------~ 113 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG-------T 113 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-------H
Confidence 4456777889999999999999 88888888888765 7999999999999999999999999999988875 5
Q ss_pred hHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChh---HHHHHHHHHH
Q 015916 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPA---KFLFMLAIVP 182 (398)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~---~~~~~~~~~~ 182 (398)
+++.+.+.|++.|++.|..+ +...++.+|||+ +|+++.|+..++..+|.++.+++...+. .-.| ..+..+....
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s 191 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVF 191 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHH
Confidence 68888999999999999888 899999999995 6999999999999999999999988843 3334 3466677788
Q ss_pred HHHHHhhhhcccccCCC
Q 015916 183 FVVCLGAIFFLRETTPA 199 (398)
Q Consensus 183 ~~i~~~~~~~l~~~p~~ 199 (398)
..++++..+++|.+++.
T Consensus 192 ~~~a~~~a~~LP~~~~s 208 (511)
T TIGR00806 192 MTFSVFLALFLKRPKRS 208 (511)
T ss_pred HHHHHHHHHhCCCCchh
Confidence 88999999999976653
No 79
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.59 E-value=4.7e-14 Score=140.70 Aligned_cols=149 Identities=19% Similarity=0.121 Sum_probs=88.4
Q ss_pred CcHHHHHHHHHHHHHhcccccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHH
Q 015916 12 GKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLV 90 (398)
Q Consensus 12 ~~w~~l~~~~~~~~~~g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~i 90 (398)
+-|...+.-++.....+. ..+.+...+++++|+|..+++++.+...++.. .+++.|++.||+|+|++++++....++
T Consensus 11 ~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 11 NYWIFSLFFFFFFFIWSS--WFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLV 88 (420)
T ss_pred chHHHHHHHHHHHHHHHH--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 345544433333332332 33455556788899999999997666666665 589999999999999999887766655
Q ss_pred HHHHHHHHHhcccCCchHHH--HHHHHHHHhhhhhhhhhHHHHHHHHh---hccCCcchHHHHHhhhhhhHHHHHHHHHh
Q 015916 91 GYGAQWLVVSRKIQPLSYWQ--MCVFLCMGGNSTTWMNTAVLVTCIRN---FRRNRGPVSGILKGYVGLSTAIFTDLCSA 165 (398)
Q Consensus 91 g~~~~~~~~~~~~~~~~~~~--l~~~~~l~G~g~g~~~~~~~~~~~~~---Fp~~RG~a~gi~~~~~glg~~i~~~l~~~ 165 (398)
+......... .+.+. ......+.++..+............| ++++||.+.|......++|..+.+.+...
T Consensus 89 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 163 (420)
T PRK09528 89 LFGPFFIYVF-----APLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGI 163 (420)
T ss_pred HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHH
Confidence 4432211100 01111 11112222222222222222233333 45668889999988889999998888766
Q ss_pred Hc
Q 015916 166 LF 167 (398)
Q Consensus 166 ~~ 167 (398)
+.
T Consensus 164 l~ 165 (420)
T PRK09528 164 LF 165 (420)
T ss_pred HH
Confidence 54
No 80
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.59 E-value=5.6e-14 Score=141.57 Aligned_cols=253 Identities=16% Similarity=0.127 Sum_probs=183.3
Q ss_pred HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Q 015916 40 LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (398)
Q Consensus 40 l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (398)
++++.+....+.+.+.+...++.++ .+++|.+.||++..+.+....+..++-.++.+.. ++++.+.+.|++.
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~-------~s~~~~ialr~ll 144 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAV-------HSFPGLIALRFLL 144 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH-------hhhHHHHHHHHHH
Confidence 4578888889999988888888865 6899999999998777776666665433333322 5789999999999
Q ss_pred hhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCC------ChhHHH-HHHHHHHHHHHHhhh
Q 015916 119 GNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD------DPAKFL-FMLAIVPFVVCLGAI 190 (398)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~------~~~~~~-~~~~~~~~~i~~~~~ 190 (398)
|+..+..+++...++..||.+ +||+.+|+..+..++|+.+.+.+...+++. .+|+|. +.-+++..+.++++.
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 999999999899999999985 799999999999999999999998886531 235543 333445555566666
Q ss_pred hcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhccccccccccccc
Q 015916 191 FFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNR 270 (398)
Q Consensus 191 ~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~ 270 (398)
+++|+.|+.....+ ++|+ +. ..++
T Consensus 225 ~~lp~~P~~~~fl~-~~ek-~~--------------------------------------------------~~~~---- 248 (495)
T KOG2533|consen 225 FFLPDNPSKAWFLT-DEEK-EL--------------------------------------------------VVER---- 248 (495)
T ss_pred EEecCChhhccccc-hHHH-HH--------------------------------------------------HHHH----
Confidence 66666665311000 0000 00 0000
Q ss_pred cCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccceee
Q 015916 271 KRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLA 350 (398)
Q Consensus 271 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g~~ 350 (398)
.+.++ + +.. ++ +.+....+|++|+|..|.+.+..++......+
T Consensus 249 ----------~~~~~---~--------------~~~-------~~---~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~ 291 (495)
T KOG2533|consen 249 ----------LRESP---S--------------GGI-------EN---KFKWKGFKEALKDPGVWPFSLCYFFLKLVNYG 291 (495)
T ss_pred ----------HHhcc---C--------------CCc-------cc---ccCHHHHHHHHhchhHHHHHHHHHHHhhcccc
Confidence 00000 0 000 00 01236789999999999999999999999999
Q ss_pred eeechHHHHHH-hCCC--chhHHHHHHHHHHHHhhhhhhhhhHHH
Q 015916 351 VMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYF 392 (398)
Q Consensus 351 ~~~n~~~i~~~-~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~ 392 (398)
+.+.++.+.++ .|++ ++..+...+.+++++|-++.|+++||+
T Consensus 292 ~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 292 FSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred HHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 99999999999 4466 366788899999999999999999994
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.56 E-value=1e-13 Score=154.91 Aligned_cols=129 Identities=14% Similarity=0.054 Sum_probs=99.1
Q ss_pred ccHHHHHHHcCCChhh--HHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHH
Q 015916 35 NYSDALKTLMNLTQLE--LNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~--~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l 111 (398)
...+.+..+++.+.+. .+++.+...++.. +++++|++.||+|||++++++.++..++.++..++... .+++.+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~----~~~~~l 106 (1146)
T PRK08633 31 LIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYL----GWFWLA 106 (1146)
T ss_pred HHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHH----ccHHHH
Confidence 3445566667766543 4666666666665 48999999999999999999887766665554433211 357888
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 112 CVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
++.|++.|++.+...++...++.+++|+ +|++++|+..++..+|..+.+.+...+.
T Consensus 107 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~ 163 (1146)
T PRK08633 107 FAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLF 163 (1146)
T ss_pred HHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999998888888899999985 6999999999999999888888776654
No 82
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.54 E-value=2.5e-17 Score=165.52 Aligned_cols=154 Identities=17% Similarity=0.141 Sum_probs=124.2
Q ss_pred hHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhH
Q 015916 50 ELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTA 128 (398)
Q Consensus 50 ~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~ 128 (398)
+.++......+|..+ ++++|++.||+|||+++.++.++..+|.++..++... .+++.+++.|++.|++.|..+..
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~R~~~G~~~g~~~~~ 122 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY----NNFWMLLIGRFLIGFGIGGAYVV 122 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccc
Confidence 456667777788876 6899999999999999999999999999988765110 16778888999999999988888
Q ss_pred HHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC---CChhHHHHHHHHHHHHHHHhhhhcccccCCCCCCch
Q 015916 129 VLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA---DDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDE 204 (398)
Q Consensus 129 ~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~ 204 (398)
...++.|.-|+ +||....+...+..+|..+...+...... ++.|+..+.++.++.++.++..+++||.|+++..++
T Consensus 123 ~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~ 202 (451)
T PF00083_consen 123 SPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKG 202 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccc
Confidence 88889999985 69999999999998887666555433322 245999999999999888999999999999987644
Q ss_pred hhh
Q 015916 205 EKE 207 (398)
Q Consensus 205 ~~~ 207 (398)
+.+
T Consensus 203 ~~~ 205 (451)
T PF00083_consen 203 RDE 205 (451)
T ss_pred ccc
Confidence 333
No 83
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.53 E-value=5.5e-12 Score=128.33 Aligned_cols=179 Identities=9% Similarity=0.026 Sum_probs=129.9
Q ss_pred CcHHHHHHHHHHHHHh-cccccccc-cHHHHHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcc-cCchHHHHHHHHH
Q 015916 12 GKWLGFVTAVWVQAIS-GNNYTFSN-YSDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDR-IPAPIILLIGSLE 87 (398)
Q Consensus 12 ~~w~~l~~~~~~~~~~-g~~~~~s~-~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr-~G~r~~~~~g~~~ 87 (398)
++|+.+...+.....- ...|.... ....+++++|+++++.+++........ ...+++|++.|| +|+|+++++|.++
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHH
Confidence 3455555444443322 23454443 344568899999999999655554444 457899999999 9999999999999
Q ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc---CCcchHHHHHhhhhhhHHHHHHHHH
Q 015916 88 GLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR---NRGPVSGILKGYVGLSTAIFTDLCS 164 (398)
Q Consensus 88 ~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~---~RG~a~gi~~~~~glg~~i~~~l~~ 164 (398)
+.+|++.+++.. .....+++.+.++|+|.|...+.....+.++||+ +|+.+.++...+.++|+++.+.+..
T Consensus 91 ~~~g~~~~~~~~------~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g 164 (489)
T PRK10207 91 LAIGYFMTGMSL------LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAP 164 (489)
T ss_pred HHHHHHHHHHhc------cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 999999887641 1122345678889999998877778889999974 3588999999999999999888888
Q ss_pred hHcCCChhHHHHHHHHHHHHHHHhhhhccccc
Q 015916 165 ALFADDPAKFLFMLAIVPFVVCLGAIFFLRET 196 (398)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~ 196 (398)
.+.+..+|++.+++..+..++.++...+.++.
T Consensus 165 ~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~ 196 (489)
T PRK10207 165 VIADKFGYSVTYNLCGAGLIIALLVYFACRGM 196 (489)
T ss_pred HHHHhhChHHHHHHHHHHHHHHHHHHHHcchh
Confidence 87776668877777655555555555555544
No 84
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.53 E-value=2e-13 Score=152.61 Aligned_cols=242 Identities=12% Similarity=0.058 Sum_probs=152.0
Q ss_pred HHHHcCCChhh-HHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHH--HHHHHHHHHHHHHhcccCCchHHHHHHHH
Q 015916 40 LKTLMNLTQLE-LNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSL--EGLVGYGAQWLVVSRKIQPLSYWQMCVFL 115 (398)
Q Consensus 40 l~~~~g~s~~~-~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~--~~~ig~~~~~~~~~~~~~~~~~~~l~~~~ 115 (398)
+.++.+.+... .++......+... +++++|++.||+|+|+++..... +........++. . .+++.+++.+
T Consensus 42 ~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~-~-----~s~~~l~~~~ 115 (1140)
T PRK06814 42 LSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFH-L-----NSVPLLFAAL 115 (1140)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHH-H-----hhHHHHHHHH
Confidence 33444444433 4555555556654 58999999999999998643222 222222222221 1 4688899999
Q ss_pred HHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhccc
Q 015916 116 CMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLR 194 (398)
Q Consensus 116 ~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~ 194 (398)
+++|++.++..++...++.+++|+ +|++++|+..++.++|..+.+.+.+.+...
T Consensus 116 ~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~------------------------- 170 (1140)
T PRK06814 116 FLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS------------------------- 170 (1140)
T ss_pred HHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc-------------------------
Confidence 999999998888889999999985 699999999999999999999998877653
Q ss_pred ccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhccccccccccccccCCC
Q 015916 195 ETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNRKRTE 274 (398)
Q Consensus 195 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~ 274 (398)
.+|+..+.....+.+ +...+... +.+ .+..+
T Consensus 171 -------------~~~~~~~~~~~~~~~----------------------------~~~~~~~~----~~~----~~~~~ 201 (1140)
T PRK06814 171 -------------GNFVILVALLMGIAV----------------------------LGWLASLF----IPK----TGNAA 201 (1140)
T ss_pred -------------cccHHHHHHHHHHHH----------------------------HHHHHHhh----CCC----CCCCC
Confidence 233322210000000 00000000 110 00000
Q ss_pred CCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccceeeeeec
Q 015916 275 PDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLAVMNN 354 (398)
Q Consensus 275 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g~~~~~n 354 (398)
.+..+ + .+. . ......++++.|++.+|.+.+..++......++...
T Consensus 202 ------~~~~~---~---------------~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (1140)
T PRK06814 202 ------PDLKI---D---------------RNI--I--------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQ 247 (1140)
T ss_pred ------CCCee---c---------------cch--H--------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0 000 0 000124678889999999998877776666666678
Q ss_pred hHHHHHH-hCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhH
Q 015916 355 MGQIGLA-LGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKM 395 (398)
Q Consensus 355 ~~~i~~~-~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~ 395 (398)
++.++++ +|.+. .....+.++++..+|.++.|+++|+..++
T Consensus 248 ~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~ 291 (1140)
T PRK06814 248 LPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITL 291 (1140)
T ss_pred hHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceee
Confidence 8888876 46653 56788999999999999999999765543
No 85
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.53 E-value=3.9e-13 Score=130.20 Aligned_cols=288 Identities=13% Similarity=0.110 Sum_probs=192.7
Q ss_pred CCCCCcHHHHHHHHHHHHHhccc-ccccccHHHHHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcccCchHHHHHHH
Q 015916 8 TSSAGKWLGFVTAVWVQAISGNN-YTFSNYSDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPAPIILLIGS 85 (398)
Q Consensus 8 ~~~~~~w~~l~~~~~~~~~~g~~-~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~~g~ 85 (398)
+-.+|||+++++..+...+.+.. -.|+.......+.|| +.....|.+..+.+.. .+++++-|+.|++|-|...++|.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 35678999998888887777653 466777777888999 6666667766666655 46899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCchHH--HHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHH
Q 015916 86 LEGLVGYGAQWLVVSRKIQPLSYW--QMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDL 162 (398)
Q Consensus 86 ~~~~ig~~~~~~~~~~~~~~~~~~--~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l 162 (398)
++.++|..+-..+....++ +.++ ....+..+.+.++.+....+....+-||| ++|..|..+...+..+|.++...+
T Consensus 117 ~ln~iGa~Ir~iss~p~v~-~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVP-PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHHHHHHhhhccCcccc-ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 9999999988765443332 2344 44467788888887766667788999997 579999999999988998877665
Q ss_pred HHhHcCCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHH
Q 015916 163 CSALFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALI 242 (398)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (398)
-..+.++ +++. ++..|-...++.+.-++++
T Consensus 196 ppilV~~--------------------------~~~~------~~~~~~~~~~f~~~~~l~~------------------ 225 (480)
T KOG2563|consen 196 PPILVPS--------------------------SKDS------EDNSWLFFTLFLGVECLAA------------------ 225 (480)
T ss_pred cceecCC--------------------------CCCc------chhHHHHHHHHHHHHHHHH------------------
Confidence 5444332 1110 1233322111111111111
Q ss_pred HHHHHHHHHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCc
Q 015916 243 FSGILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGED 322 (398)
Q Consensus 243 ~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 322 (398)
+ + .++... .++. +|+ +.| + . .+.. .+ +..--
T Consensus 226 ------l-~-l~l~~~----~~~~---~P~----------tPp---s-~------------s~~~------~~--~~~f~ 256 (480)
T KOG2563|consen 226 ------L-L-LALVLF----VFTK---KPP----------TPP---S-A------------SQAA------LQ--DASFP 256 (480)
T ss_pred ------H-H-HHHHHH----hcCC---CCC----------CCC---c-h------------hHhh------hh--cCcHH
Confidence 0 0 122222 1111 111 111 1 0 0000 10 11113
Q ss_pred chHHHHhccHhHHHHHHHHHhcccceeeeeechHHHHHHhCCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 323 HTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 323 ~t~~~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
.+.+++++|++|-++.+++.++.|.-....+.+-..+...||. ++.....+.-++.++|.++.|.+.||.++-+
T Consensus 257 ~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk 332 (480)
T KOG2563|consen 257 KSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFK 332 (480)
T ss_pred HHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHH
Confidence 5789999999999999999888888777777777677777887 4666777788899999999999999987643
No 86
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.52 E-value=1.3e-12 Score=129.19 Aligned_cols=127 Identities=17% Similarity=0.037 Sum_probs=79.3
Q ss_pred HHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhccc-CCchHHHHHHHHH
Q 015916 39 ALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKI-QPLSYWQMCVFLC 116 (398)
Q Consensus 39 ~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~-~~~~~~~l~~~~~ 116 (398)
.+++++|++..+.+++.....+... ..++.|++.||+|||+.++.+.+..+++............ .....+..++.++
T Consensus 28 ~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (396)
T TIGR00882 28 WLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGL 107 (396)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3577899999999997666667665 5899999999999999999887766655443322111000 0011222334566
Q ss_pred HHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhH
Q 015916 117 MGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSAL 166 (398)
Q Consensus 117 l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~ 166 (398)
+.|++.+...........+ ..++++...|......++|.++.+.+...+
T Consensus 108 ~~g~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l 156 (396)
T TIGR00882 108 YLGFVFSAGAGAIEAYIEK-VSRNSNFEYGKARMFGCVGWALCASIAGIL 156 (396)
T ss_pred HHHHHhccchhhHHHHHHH-hhhhcccccchhhhhcccHHHHHHHHHhhh
Confidence 6666555443332222222 224456677777777788888888776544
No 87
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.50 E-value=2.6e-12 Score=127.16 Aligned_cols=146 Identities=14% Similarity=0.033 Sum_probs=85.9
Q ss_pred cHHHHHHHHHHHHHhcccccccccHHHHHHHcCCChhhHHHHH-HHHHhhhhhhhhhhhhhcccCchHHHH-HHHHHHHH
Q 015916 13 KWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLS-VVKDIGKAFGLLAGLASDRIPAPIILL-IGSLEGLV 90 (398)
Q Consensus 13 ~w~~l~~~~~~~~~~g~~~~~s~~~~~l~~~~g~s~~~~~~i~-~~~~~~~~~~~~~G~l~Dr~G~r~~~~-~g~~~~~i 90 (398)
.|..++..++.....+. ..+...+.+++++|+|.++++++. .....+...+++.|...||+|+|+.++ .+.+...+
T Consensus 17 ~~~~~~~~~~~~~~~~~--~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~ 94 (393)
T PRK15011 17 STAFLIVAFLTGIAGAL--QTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVL 94 (393)
T ss_pred hHHHHHHHHHHHHHHHH--HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 35444444443332222 223344457899999999999964 444556666655444499999998755 44555556
Q ss_pred HHHHHHHHHhcccCCchHHHHHHHH-HHHhhhhhhhhhHHHHHHHHhhccC-C--cchHHHHHhhhhhhHHHHHHHHHhH
Q 015916 91 GYGAQWLVVSRKIQPLSYWQMCVFL-CMGGNSTTWMNTAVLVTCIRNFRRN-R--GPVSGILKGYVGLSTAIFTDLCSAL 166 (398)
Q Consensus 91 g~~~~~~~~~~~~~~~~~~~l~~~~-~l~G~g~g~~~~~~~~~~~~~Fp~~-R--G~a~gi~~~~~glg~~i~~~l~~~~ 166 (398)
+..+..++ .+++.+++.+ ++.+.+. ...+.......++.|++ | +...++..++..+|..+.+++...+
T Consensus 95 ~~~~~~~~-------~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l 166 (393)
T PRK15011 95 ACTLFAWN-------RNYFVLLFVGVFLSSFGS-TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYAL 166 (393)
T ss_pred HHHHHHHh-------hHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 66555443 4566665544 4444433 33333333344444432 3 2334677778889999998888776
Q ss_pred cC
Q 015916 167 FA 168 (398)
Q Consensus 167 ~~ 168 (398)
.+
T Consensus 167 ~~ 168 (393)
T PRK15011 167 AM 168 (393)
T ss_pred HH
Confidence 54
No 88
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.50 E-value=8.1e-13 Score=131.95 Aligned_cols=82 Identities=11% Similarity=0.086 Sum_probs=61.3
Q ss_pred ccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCc-hHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHH
Q 015916 35 NYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPA-PIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~-r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~ 112 (398)
...+.+++++|++.+|++++.....++... +++.|++.||+|+ |+++.++.+...++.....+. ++++.++
T Consensus 24 ~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 96 (418)
T TIGR00889 24 TLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQV-------TTPAGMF 96 (418)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh-------cCHHHHH
Confidence 344456788999999999987777777764 8999999999965 778888887776766665543 3577777
Q ss_pred HHHHHHhhhhh
Q 015916 113 VFLCMGGNSTT 123 (398)
Q Consensus 113 ~~~~l~G~g~g 123 (398)
+.+++.|++.+
T Consensus 97 ~~~~l~~~~~~ 107 (418)
T TIGR00889 97 PVLLANSLAYM 107 (418)
T ss_pred HHHHHHHHHHc
Confidence 77777676544
No 89
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.45 E-value=1.3e-12 Score=134.13 Aligned_cols=152 Identities=16% Similarity=0.120 Sum_probs=130.3
Q ss_pred HHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhh
Q 015916 42 TLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGN 120 (398)
Q Consensus 42 ~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 120 (398)
+.++.+.....+..+...+|.++ +++.|.++||+|||++++++.++..++.+..+++ ++++.++++|++.|+
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a-------~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA-------PNYWMFLIFRFLSGF 183 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh-------CcHHHHHHHHHHHHh
Confidence 55677777777777788888876 5799999999999999999999999998888775 689999999999999
Q ss_pred hhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhcccccCCC
Q 015916 121 STTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPA 199 (398)
Q Consensus 121 g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~ 199 (398)
+.+..+.....++.++++ ++|+.+..+ ......++.+.++....+.+ .|+++.++...+.++.++..++.+|.|+|
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rw 260 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRW 260 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHH
Confidence 998888888999999996 569999999 77777888888888888876 79999998888888887777777799998
Q ss_pred CCCc
Q 015916 200 STVD 203 (398)
Q Consensus 200 ~~~~ 203 (398)
+...
T Consensus 261 l~~~ 264 (521)
T KOG0255|consen 261 LLSK 264 (521)
T ss_pred HHHc
Confidence 7653
No 90
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.43 E-value=1.2e-11 Score=117.14 Aligned_cols=244 Identities=12% Similarity=0.046 Sum_probs=183.0
Q ss_pred cccccccHHHHHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Q 015916 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 30 ~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~ 108 (398)
..+.+...+++++++|.|.++++.+++.-.+.. .++|++.++..|+|.++.+..+.++.++|..+-.. .+.
T Consensus 28 itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~--------~~~ 99 (395)
T COG2807 28 ITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSL--------GGL 99 (395)
T ss_pred hhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhc--------ccH
Confidence 456677888999999999999999766555544 67999999999999999999999999999998754 235
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHh
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG 188 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 188 (398)
+.++..-++.|.|.+..++.-...+-++||||-|..+|+.++..++|+++.+.+.-.+-++
T Consensus 100 ~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~------------------- 160 (395)
T COG2807 100 PLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQH------------------- 160 (395)
T ss_pred HHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHh-------------------
Confidence 6677788889999998888888889999999999999999999999988887776554331
Q ss_pred hhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhccccccccccc
Q 015916 189 AIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNL 268 (398)
Q Consensus 189 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~ 268 (398)
..+||....+.....+..+ ++-.|. ..
T Consensus 161 ------------------~~gW~~aL~~WAl~allAl------------------------~~WlPq-------~~---- 187 (395)
T COG2807 161 ------------------SGGWRGALGFWALLALLAL------------------------LIWLPQ-------AL---- 187 (395)
T ss_pred ------------------hccHHHHHHHHHHHHHHHH------------------------HHHhhh-------cc----
Confidence 2467765433332111111 111110 00
Q ss_pred cccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccce
Q 015916 269 NRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTG 348 (398)
Q Consensus 269 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g 348 (398)
|+ ..+ + .+. + ..+...+.|+|.-|.+.+-+.+.....
T Consensus 188 r~------------~~~---~---------------~~~------~-------~~~~~~vw~~~~aW~vtLfmGlqS~~~ 224 (395)
T COG2807 188 RE------------QAA---S---------------IAT------K-------LVSVRKVWRSPLAWQVTLFMGLQSLLY 224 (395)
T ss_pred cc------------ccc---c---------------ccc------c-------cccccccccCchhHHHHHHHHhhHHHH
Confidence 00 000 0 000 0 112234789999999999999999999
Q ss_pred eeeeechHHHHHHhCCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 349 LAVMNNMGQIGLALGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 349 ~~~~~n~~~i~~~~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
..++..+++|+.|.|++ ++..++++..+.+....++.-++.+|...++
T Consensus 225 Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r 274 (395)
T COG2807 225 YIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR 274 (395)
T ss_pred HHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999998 3678999999999999999999999855443
No 91
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.40 E-value=4.4e-12 Score=123.02 Aligned_cols=167 Identities=17% Similarity=0.161 Sum_probs=113.4
Q ss_pred ccccccHHHHHHH-cC-------CChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhc
Q 015916 31 YTFSNYSDALKTL-MN-------LTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSR 101 (398)
Q Consensus 31 ~~~s~~~~~l~~~-~g-------~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~ 101 (398)
++.+...+-+... +| ++..-.+.+..+..+|.++ +++.|++.||+|||++.....+++.++.+.+++....
T Consensus 58 F~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~ 137 (538)
T KOG0252|consen 58 FSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGT 137 (538)
T ss_pred hhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCC
Confidence 4445555555432 33 3344455677888899887 7999999999999999999999999999877664333
Q ss_pred ccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHH---HHHHHHHhHcCC--------
Q 015916 102 KIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTA---IFTDLCSALFAD-------- 169 (398)
Q Consensus 102 ~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~---i~~~l~~~~~~~-------- 169 (398)
..+..-.+.++.+|++.|+|.|.=|+.+.+..+|.-.+ +||.-.+.+.+..|+|-. +.+.+....++.
T Consensus 138 ~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~ 217 (538)
T KOG0252|consen 138 TSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTY 217 (538)
T ss_pred CCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCc
Confidence 22222356778899999999999888777767777664 699999998888887633 334444444432
Q ss_pred ----ChhHHHHHHHHHHHHHHHhhhhcccccC
Q 015916 170 ----DPAKFLFMLAIVPFVVCLGAIFFLRETT 197 (398)
Q Consensus 170 ----~~~~~~~~~~~~~~~i~~~~~~~l~~~p 197 (398)
..||..+.++.+|++..+..-+.+||++
T Consensus 218 ~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~ 249 (538)
T KOG0252|consen 218 PHLDGVWRIIFGLGAVPALLVLYFRLKMPETA 249 (538)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCCcch
Confidence 1366666666666665554444443333
No 92
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.39 E-value=7.7e-11 Score=120.65 Aligned_cols=156 Identities=16% Similarity=0.067 Sum_probs=112.1
Q ss_pred cccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHH
Q 015916 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (398)
Q Consensus 34 s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~ 112 (398)
+...+.+-+++|-+ ....|+++...++... .++.|+++|.||||..++.|.++..+|.++.+.+ ++...+.
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA-------~~~~~~i 135 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA-------QNMNTFI 135 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC-------CcHHHHH
Confidence 34456778888865 5667777777777654 7999999999999999999999999999998754 5677888
Q ss_pred HHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhh-
Q 015916 113 VFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAI- 190 (398)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~- 190 (398)
.+..+.|+|.|.... ....++|..|. +|+.+.++.....-....+.+.+.+.+..+..|||.+++.+....+.++..
T Consensus 136 ag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 136 AGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 888999998876654 34457888884 598887777655434333445555555556678887777776555554444
Q ss_pred hcccccCC
Q 015916 191 FFLRETTP 198 (398)
Q Consensus 191 ~~l~~~p~ 198 (398)
++.++|++
T Consensus 215 ~fY~PP~~ 222 (599)
T PF06609_consen 215 FFYFPPPR 222 (599)
T ss_pred HHhCCCch
Confidence 44454443
No 93
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.36 E-value=3.1e-11 Score=122.98 Aligned_cols=170 Identities=15% Similarity=0.077 Sum_probs=113.9
Q ss_pred ccccccccHHHH-HHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCc
Q 015916 29 NNYTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPL 106 (398)
Q Consensus 29 ~~~~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~ 106 (398)
..|.+..+.|++ ++++|++..+..++.....++... .+..|++.||+|||+++.++.+...++...+...... .
T Consensus 265 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~----~ 340 (490)
T PRK10642 265 TYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINS----N 340 (490)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhC----C
Confidence 345566677875 567899988776665666666655 6889999999999999988876554433322211111 2
Q ss_pred hHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCC-ChhHHHHHHHHHHHH
Q 015916 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFV 184 (398)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~ 184 (398)
+...+++.+++.|++.+.........+.+.||+ .||+++|+......+++.+.+.+...+.+. ..+....++..++++
T Consensus 341 ~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 420 (490)
T PRK10642 341 VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAV 420 (490)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 345555667776665554444455667789996 599999986555556677788887777653 234444445566777
Q ss_pred HHHhhhhcccccCCCCCC
Q 015916 185 VCLGAIFFLRETTPASTV 202 (398)
Q Consensus 185 i~~~~~~~l~~~p~~~~~ 202 (398)
++++..+++||.|++...
T Consensus 421 i~~~~~~~~pes~~~~~~ 438 (490)
T PRK10642 421 IGLITGVTMKETANRPLK 438 (490)
T ss_pred HHHHHHHHhccccCCCCC
Confidence 777788888999987653
No 94
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.35 E-value=1.4e-11 Score=116.32 Aligned_cols=185 Identities=13% Similarity=0.061 Sum_probs=139.0
Q ss_pred CcHHHHHHHHHHH-HHhcccccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHH
Q 015916 12 GKWLGFVTAVWVQ-AISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGL 89 (398)
Q Consensus 12 ~~w~~l~~~~~~~-~~~g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ 89 (398)
-+|.....+.... .-.+-....+...|.++..+|.+..|..+++....+++.+ +...|.+.|++|||+...+..+..+
T Consensus 75 fq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~ 154 (528)
T KOG0253|consen 75 FQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTG 154 (528)
T ss_pred chhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHH
Confidence 3455444333332 2223334456778888999999999999999988999977 6899999999999999888877776
Q ss_pred HHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 90 VGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 90 ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
+.-++.+. ++++..++++|.+.|+|.|. ++...+.-.+.-|. +|++-+-.. ..+.+|..+-..+.-..+.
T Consensus 155 v~~~is~~-------spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~ 225 (528)
T KOG0253|consen 155 VFGVISGA-------SPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS 225 (528)
T ss_pred HHHHhhcC-------CCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH
Confidence 65554432 26788899999999999986 44444445555574 788877666 7788887777777666677
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhcccccCCCCCCchh
Q 015916 169 DDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEE 205 (398)
Q Consensus 169 ~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~~ 205 (398)
+-+|+|+++...+|..+.....++++|.|+-...+++
T Consensus 226 ~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~ 262 (528)
T KOG0253|consen 226 NFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGD 262 (528)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCC
Confidence 7789999999999999999999999999998765433
No 95
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.34 E-value=1.8e-11 Score=122.44 Aligned_cols=129 Identities=14% Similarity=0.009 Sum_probs=87.5
Q ss_pred cHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcc----cCchH-HHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 36 YSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDR----IPAPI-ILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr----~G~r~-~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
+.+.+.+++|++..+++++.+...+...+ .|+.|+++|| +|||| .++++....+++.++++.... .......+
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~-~~~~~~~~ 100 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPD-FSATGKLV 100 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCC-CCcchHHH
Confidence 34456888999999999977777777654 8999999998 67745 577787888877777654211 00001234
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhc--cCCcchHHHHHhhhhhhHHHHHHHHHh
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDLCSA 165 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~~l~~~ 165 (398)
.+++.+++.+.+.+...++......+..+ ++|+++.++...+..+|+.+.+.+...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~ 158 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLP 158 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455667777777655555666666653 579999998887777777666555433
No 96
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.32 E-value=1.2e-10 Score=118.18 Aligned_cols=157 Identities=13% Similarity=0.014 Sum_probs=120.3
Q ss_pred ccccccHHH-HHHH--cCCChhhHHHHHHHHHhhhh-hhhhhhhhhcc-cCchHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 015916 31 YTFSNYSDA-LKTL--MNLTQLELNNLSVVKDIGKA-FGLLAGLASDR-IPAPIILLIGSLEGLVGYGAQWLVVSRKIQP 105 (398)
Q Consensus 31 ~~~s~~~~~-l~~~--~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr-~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~ 105 (398)
|....+.|. ++++ +|++..+.+++.....++.. ..+++|++.|| +|+|+++.++.++.+++++++++.
T Consensus 27 ~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~------- 99 (475)
T TIGR00924 27 YGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS------- 99 (475)
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc-------
Confidence 333333444 4666 99999999996666666655 47899999999 899999999999999999887753
Q ss_pred chHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc----CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHH
Q 015916 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR----NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIV 181 (398)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~----~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~ 181 (398)
.+++.+++.+++.|+|.|...+.....+++++|+ +|+.+.++...+..+|+++.+.+...+.+...|++.+.++.+
T Consensus 100 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~ 179 (475)
T TIGR00924 100 IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAV 179 (475)
T ss_pred ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH
Confidence 3456677788889999988777777889999974 388999999999999999999998888776567776666655
Q ss_pred HHHHHHhhhhccc
Q 015916 182 PFVVCLGAIFFLR 194 (398)
Q Consensus 182 ~~~i~~~~~~~l~ 194 (398)
..+++++..++.+
T Consensus 180 ~~~~~~l~~~~~~ 192 (475)
T TIGR00924 180 GMVIGLLTFFAGR 192 (475)
T ss_pred HHHHHHHHHHHcc
Confidence 4444544444443
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.31 E-value=9.6e-11 Score=119.67 Aligned_cols=156 Identities=8% Similarity=0.040 Sum_probs=116.0
Q ss_pred cccccccHHH-HHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcc-cCchHHHHHHHHHHHHHHHHHHHHHhcccCCc
Q 015916 30 NYTFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDR-IPAPIILLIGSLEGLVGYGAQWLVVSRKIQPL 106 (398)
Q Consensus 30 ~~~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr-~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~ 106 (398)
.|.+..+.+. +++++|++.++.+++......... ..+++|++.|| +|+|+++.+|.++.+++++++.+. . .
T Consensus 37 ~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~--~----~ 110 (500)
T PRK09584 37 YYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS--G----H 110 (500)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh--c----c
Confidence 3444444444 578999999998885544443333 35789999999 599999999999999998887753 1 2
Q ss_pred hHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccC---CcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHH
Q 015916 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRN---RGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPF 183 (398)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~---RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 183 (398)
+.+.+++.+++.|+|.|.........+.++||++ |+.+.++...+.++|+.+.+.+...+.+..+|++.+.++.+..
T Consensus 111 ~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~ 190 (500)
T PRK09584 111 DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGM 190 (500)
T ss_pred cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 3445566788889998877667778899999842 4567888888999999999999888877667888777777555
Q ss_pred HHHHhhhh
Q 015916 184 VVCLGAIF 191 (398)
Q Consensus 184 ~i~~~~~~ 191 (398)
+++++..+
T Consensus 191 ~i~~i~~~ 198 (500)
T PRK09584 191 LITVVNFA 198 (500)
T ss_pred HHHHHHHH
Confidence 55444433
No 98
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.28 E-value=4e-10 Score=111.21 Aligned_cols=255 Identities=12% Similarity=-0.037 Sum_probs=141.9
Q ss_pred HHhcccccc-cccHHHHHHHcCCChhhHHHHHHH--HHhhh-hhhhhh-hhhhcccCchHHHHHHHHHHHH-HHHHHHHH
Q 015916 25 AISGNNYTF-SNYSDALKTLMNLTQLELNNLSVV--KDIGK-AFGLLA-GLASDRIPAPIILLIGSLEGLV-GYGAQWLV 98 (398)
Q Consensus 25 ~~~g~~~~~-s~~~~~l~~~~g~s~~~~~~i~~~--~~~~~-~~~~~~-G~l~Dr~G~r~~~~~g~~~~~i-g~~~~~~~ 98 (398)
...|..+.+ ..+.|.+.++.|.|.++++.++.. ..+.. +.+|+. ++..||+|+||..+++..+... ....+...
T Consensus 11 ~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~ 90 (390)
T TIGR02718 11 LSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALV 90 (390)
T ss_pred HHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcC
Confidence 345554333 345677778889999999996422 23333 347776 4478999999997666543322 22222211
Q ss_pred HhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHH
Q 015916 99 VSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFM 177 (398)
Q Consensus 99 ~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~ 177 (398)
....+...+.+ ....+.++.....+...-....++.++ +++...+....+..+|..+.+.....+.+
T Consensus 91 --~~~~~~~~~~~-~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~--------- 158 (390)
T TIGR02718 91 --GPDVAGAGWAV-GLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG--------- 158 (390)
T ss_pred --CcchhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 10001112222 222333333343444444456677764 46888888888878888877766555443
Q ss_pred HHHHHHHHHHhhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhh
Q 015916 178 LAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAI 257 (398)
Q Consensus 178 ~~~~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~ 257 (398)
..+||..+...+.+.+. ...+. +
T Consensus 159 -----------------------------~~gw~~~f~~~a~l~~~---------------------------~~~~~-~ 181 (390)
T TIGR02718 159 -----------------------------KFGQRPAFLLVACVPLA---------------------------SLVCV-L 181 (390)
T ss_pred -----------------------------HhCHHHHHHHHHHHHHH---------------------------HHHHH-H
Confidence 34555543222211000 00110 0
Q ss_pred ccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHH
Q 015916 258 PVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWIL 337 (398)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l 337 (398)
. +.++ ++ .++ +++ + ++..+.++.+|+|.+|.+
T Consensus 182 ~----~~~~---~~-----------~~~-------------------~~~------~-----~~~~~~~~~l~~~~~~~~ 213 (390)
T TIGR02718 182 W----LKDR---AV-----------ASP-------------------EAP------L-----ARRASLFRFFRRPLAWSL 213 (390)
T ss_pred H----cCCC---Cc-----------Ccc-------------------ccc------h-----hhHHHHHHHHcCcCHHHH
Confidence 1 1100 00 000 000 0 001246789999999887
Q ss_pred HHHHHhcccceeeeeechHHHHHHhCCCc--hhHHHHHHH-HHHHHhhhhhhhhhHHHHhHh
Q 015916 338 FVSFLCGVGTGLAVMNNMGQIGLALGYVD--VSIFVSLTS-IWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 338 ~~~~~~~~~~g~~~~~n~~~i~~~~g~~~--~a~~vsl~s-i~~~~GRl~~G~lsD~~~~~~ 396 (398)
.+..++.........+..+.+.++.|++. .....++.+ +...+|.++.|++.||+++|+
T Consensus 214 ~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~ 275 (390)
T TIGR02718 214 LALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWR 275 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 77666665545455566677888999874 445556655 466788999999999999886
No 99
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.26 E-value=1.6e-11 Score=117.14 Aligned_cols=149 Identities=19% Similarity=0.187 Sum_probs=119.6
Q ss_pred HcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhh
Q 015916 43 LMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNS 121 (398)
Q Consensus 43 ~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g 121 (398)
..+-++++++++.....+..+ ..|+.|.+.||+|+|..+++|.+++....+++++. .+++.+++.|.++|+|
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg-------~sy~~l~vAR~LQgvg 172 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG-------NSYPMLFVARSLQGVG 172 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc-------chhHHHHHHHHHhhhh
Confidence 355667788886555556665 58999999999999999999999999999998874 5788899999999999
Q ss_pred hhhhhhHHHHHHHHhhcc--CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhH-HHHHHHHHHHHHHHhhhhcccccCC
Q 015916 122 TTWMNTAVLVTCIRNFRR--NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAK-FLFMLAIVPFVVCLGAIFFLRETTP 198 (398)
Q Consensus 122 ~g~~~~~~~~~~~~~Fp~--~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~l~~~p~ 198 (398)
.++..++...++++.||+ +||.++|+..++.++|-.+.|++.+.+++-.+.. -++.++++..+-..+..+.+++...
T Consensus 173 sA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 173 SAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred HHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc
Confidence 999999999999999995 3899999999999999999999988888754433 3445555555555555555544333
No 100
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.25 E-value=4.7e-10 Score=113.44 Aligned_cols=176 Identities=12% Similarity=0.003 Sum_probs=119.5
Q ss_pred cHHHHHHHHHHHHH-hcccccccccHHH-HHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhccc-CchHHHHHHHHHH
Q 015916 13 KWLGFVTAVWVQAI-SGNNYTFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRI-PAPIILLIGSLEG 88 (398)
Q Consensus 13 ~w~~l~~~~~~~~~-~g~~~~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~-G~r~~~~~g~~~~ 88 (398)
++..+...+..... ....|....+.|. +++++|++..+.+.+......... ..+++|++.||+ |||+++.+|.++.
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 34434444443332 2345666556665 467899999999986665555554 478999999999 9999999999999
Q ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc---CCcchHHHHHhhhhhhHHHHHHHHHh
Q 015916 89 LVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR---NRGPVSGILKGYVGLSTAIFTDLCSA 165 (398)
Q Consensus 89 ~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~---~RG~a~gi~~~~~glg~~i~~~l~~~ 165 (398)
.+|++++... + .+...+++...+.++|.|.........+.+.||+ +|..+.++...+..+|+.+.|.+...
T Consensus 87 ~lg~lll~~~--~----~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~ 160 (493)
T PRK15462 87 AIGHVVLGAS--E----IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY 160 (493)
T ss_pred HHHHHHHHHh--h----cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHH
Confidence 9998766532 1 1112233332333345555444455678999984 59999999999999999999999988
Q ss_pred HcCCChhHHHHHHHHHHHHHHHhhhhccc
Q 015916 166 LFADDPAKFLFMLAIVPFVVCLGAIFFLR 194 (398)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~i~~~~~~~l~ 194 (398)
+.+..+|++.+.++.+..+++++..++.+
T Consensus 161 L~~~~Gw~~~F~iaaigm~l~li~~~~~~ 189 (493)
T PRK15462 161 AQEEYSWAMGFGLAAVGMIAGLVIFLCGN 189 (493)
T ss_pred HHhhhChHHHHHHHHHHHHHHHHHHHHhh
Confidence 87766677776666655555555444433
No 101
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.24 E-value=3.8e-10 Score=111.67 Aligned_cols=157 Identities=10% Similarity=0.052 Sum_probs=111.0
Q ss_pred cccccHHH-HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 32 TFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 32 ~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
.+..+.|. +++++|++..+.+++.....+.... .++.|++.||+|+|+.+..+.+...+.+...... ++.+
T Consensus 234 ~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 306 (393)
T PRK15011 234 LYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA-------HSPA 306 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-------hhHH
Confidence 33445555 5678999999888854444444443 6899999999999998887766555544333221 2445
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhh
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGA 189 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~ 189 (398)
.+.+.+++.+++.+...........+.+|++||++.++......+|..+.+.+.+.+.+...++..+.++.+..++.++.
T Consensus 307 ~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK15011 307 ILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFC 386 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 55556666666555544444556778899899999999988889999999988888777556777777777777777777
Q ss_pred hhcccc
Q 015916 190 IFFLRE 195 (398)
Q Consensus 190 ~~~l~~ 195 (398)
.+++|+
T Consensus 387 ~~~~~~ 392 (393)
T PRK15011 387 LLRIKD 392 (393)
T ss_pred HHhhcC
Confidence 776654
No 102
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.14 E-value=1.2e-09 Score=90.34 Aligned_cols=125 Identities=15% Similarity=0.153 Sum_probs=97.2
Q ss_pred hhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc
Q 015916 60 IGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR 138 (398)
Q Consensus 60 ~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp 138 (398)
++.. .+++.|++.||+|+|+.+..+.....++.+..... ++++.+.+.+++.|++.+..+........+.+|
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-------SNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 4444 47899999999999999999999888888776653 356777778889999888777777788899998
Q ss_pred c-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhh
Q 015916 139 R-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIF 191 (398)
Q Consensus 139 ~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 191 (398)
+ +|+++.++......+|..+.+.+...+.+...+++.+.+.....++..+..+
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLA 135 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHh
Confidence 5 6999999999999999999998888887665565555555444444443333
No 103
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.13 E-value=2.6e-09 Score=104.20 Aligned_cols=148 Identities=14% Similarity=0.133 Sum_probs=107.3
Q ss_pred HHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Q 015916 40 LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (398)
Q Consensus 40 l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (398)
+++++|.+..+.+++......... ..++.|++.||+|+|+++.++.+...+.+....+. ++.+.+.+..++.
T Consensus 226 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 298 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAAD-------NSLWALLMLQLLN 298 (375)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH
Confidence 467899999988885444433333 46889999999999999988877666555444332 3456566667777
Q ss_pred hhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhccc
Q 015916 119 GNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLR 194 (398)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~ 194 (398)
|++.+...........+.+|++|+.+.|+......+|..+.+.+.+.+.+...++..+.+..+..+++.+...++|
T Consensus 299 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 299 AIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheec
Confidence 8777766666667778888988899999999888899999999888877654555555555555666666555554
No 104
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.10 E-value=2.4e-09 Score=106.02 Aligned_cols=158 Identities=18% Similarity=0.103 Sum_probs=113.5
Q ss_pred ccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
+....+.|.+.++.|++..+.+.+.....++... .++.|++.||+|+|+.+..+.+...++.+...+. ++.+
T Consensus 237 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 309 (406)
T PRK11551 237 YFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAA-------PSFA 309 (406)
T ss_pred HHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc-------CcHH
Confidence 3344566777778899999988866666666654 7899999999999999888766666665554332 2445
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCC-ChhHHHHHHHHHHHHHHH
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVCL 187 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~ 187 (398)
.+.+..++.|++.+...........+.+|+ +||++.|+.....++|+++.+.+.+.+.+. ..+...+.......++.+
T Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK11551 310 GMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAA 389 (406)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHH
Confidence 555555666666655556667778899985 699999999999999999999999988875 344555555555555555
Q ss_pred hhhhcccc
Q 015916 188 GAIFFLRE 195 (398)
Q Consensus 188 ~~~~~l~~ 195 (398)
++.+.+.+
T Consensus 390 ~~~~~~~~ 397 (406)
T PRK11551 390 LAALLLVS 397 (406)
T ss_pred HHHHHHhc
Confidence 55555433
No 105
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.08 E-value=2.6e-09 Score=113.05 Aligned_cols=131 Identities=12% Similarity=0.051 Sum_probs=93.2
Q ss_pred HHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHH
Q 015916 57 VKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIR 135 (398)
Q Consensus 57 ~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~ 135 (398)
...++.+. .+++|++.||+|||++++++.++.+++.+++++. .+.+.+.+.+++.|+..+........++++
T Consensus 603 l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~-------~s~~~ll~~~~l~g~~~~~~~~~~~a~~aE 675 (742)
T TIGR01299 603 LGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG-------NSESAMIALLCLFGGLSIAAWNALDVLTVE 675 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444 6899999999999999999999999888877654 233444455556666555555667778899
Q ss_pred hhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhcccc
Q 015916 136 NFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLRE 195 (398)
Q Consensus 136 ~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~ 195 (398)
+||. +||+++|+..+...+|+++.|.+...+.... ...+++++.+..+++.+..+++||
T Consensus 676 l~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~-~~~pf~i~a~~lll~~ll~~~LPE 735 (742)
T TIGR01299 676 LYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT-KAAPILFASAALACGGLLALKLPD 735 (742)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9995 6999999999999999999998887776533 233444444444445555555543
No 106
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.08 E-value=3.1e-09 Score=106.12 Aligned_cols=162 Identities=10% Similarity=0.087 Sum_probs=111.3
Q ss_pred ccHHHHHHHcCCCh--------hhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 015916 35 NYSDALKTLMNLTQ--------LELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQP 105 (398)
Q Consensus 35 ~~~~~l~~~~g~s~--------~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~ 105 (398)
.+.+.+.++.|.+. ++.+...+...+... ..++.|++.||+|+|+++.++.++..+++.+.... .. . .
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~-~~-~-~ 305 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYG-DP-E-Y 305 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-Cc-c-h
Confidence 44455555666553 344554444444444 46899999999999999999999888887666542 10 0 0
Q ss_pred chHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHH-hhhhhhHHHHHHHHHhHcCC------ChhHHHH-
Q 015916 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILK-GYVGLSTAIFTDLCSALFAD------DPAKFLF- 176 (398)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~-~~~glg~~i~~~l~~~~~~~------~~~~~~~- 176 (398)
.+.+.+++..++.|++.+..+......+.+++|+ +||++.|+.. ...++|+++.+.+.+.+.+. .+|+..+
T Consensus 306 ~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~ 385 (418)
T TIGR00889 306 FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWL 385 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHH
Confidence 1245556678888888887766777788999995 6999999997 67889999999998888764 1255444
Q ss_pred HHHHHHHHHHHhhhhcccccCCC
Q 015916 177 MLAIVPFVVCLGAIFFLRETTPA 199 (398)
Q Consensus 177 ~~~~~~~~i~~~~~~~l~~~p~~ 199 (398)
..++...+.+++..+++|++...
T Consensus 386 ~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 386 FFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHHHHHHHHHHHhCCcccC
Confidence 34445555666666777766443
No 107
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.07 E-value=2.4e-09 Score=108.39 Aligned_cols=159 Identities=14% Similarity=0.037 Sum_probs=103.2
Q ss_pred ccccccHHH-HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Q 015916 31 YTFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 31 ~~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~ 108 (398)
+....+.|. +++++|+|..+.++......++..+ .++.|++.||+|+|+.+..+.....++.....+. .. .+.
T Consensus 275 ~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~-~~----~~~ 349 (467)
T PRK09556 275 IGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQ-HA----TSE 349 (467)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHH-hc----CcH
Confidence 344566775 5678999999998876666666655 7999999999999988776655444433222221 11 234
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhh-hHHHHHHHHHhHcC------------CChhHH
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGL-STAIFTDLCSALFA------------DDPAKF 174 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~gl-g~~i~~~l~~~~~~------------~~~~~~ 174 (398)
+.+++..++.|...............+++|+ +||++.|+......+ |+++.+.+.+.+.+ ...|+.
T Consensus 350 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~ 429 (467)
T PRK09556 350 YMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAG 429 (467)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHH
Confidence 4444555555543322222222455699996 599999999888776 66888999888887 234555
Q ss_pred HHHHHHHHHHHHHhhhhccc
Q 015916 175 LFMLAIVPFVVCLGAIFFLR 194 (398)
Q Consensus 175 ~~~~~~~~~~i~~~~~~~l~ 194 (398)
.+.+..+..+++++..++++
T Consensus 430 ~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 430 TFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 55555555566666665554
No 108
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.06 E-value=4.1e-09 Score=101.00 Aligned_cols=154 Identities=22% Similarity=0.229 Sum_probs=121.2
Q ss_pred cccccHHHHHH-HcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchH-HHHHHHHHHHHHHHHHHHHHhcccCCchH
Q 015916 32 TFSNYSDALKT-LMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPI-ILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 32 ~~s~~~~~l~~-~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~-~~~~g~~~~~ig~~~~~~~~~~~~~~~~~ 108 (398)
.+..+.|.+.+ .+|.+..+.+++.....++... .++.|++.||+|+|+ .+.++.++..++.+..... ++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~ 265 (352)
T cd06174 193 GLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA-------PSL 265 (352)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-------ccH
Confidence 33445566544 4599999999977777777755 789999999999999 9999999999988877653 345
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHH
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCL 187 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 187 (398)
+.+.+..++.|++.+...........+.+| ++||++.|+......+|..+.+.+.+.+.+...++..+.+..+..++..
T Consensus 266 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~ 345 (352)
T cd06174 266 ALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAA 345 (352)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence 666778888899888888888888999999 5799999999999999999999999998876666666665555555555
Q ss_pred hhhhc
Q 015916 188 GAIFF 192 (398)
Q Consensus 188 ~~~~~ 192 (398)
+..++
T Consensus 346 i~~~~ 350 (352)
T cd06174 346 LLLLL 350 (352)
T ss_pred HHhee
Confidence 44443
No 109
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.06 E-value=7.4e-09 Score=102.74 Aligned_cols=162 Identities=11% Similarity=0.051 Sum_probs=107.2
Q ss_pred cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHH-HHHHHHHHHHHHHHHHHhcccCCch
Q 015916 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILL-IGSLEGLVGYGAQWLVVSRKIQPLS 107 (398)
Q Consensus 30 ~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~-~g~~~~~ig~~~~~~~~~~~~~~~~ 107 (398)
.+.+..+.|.+.+++|++..+.+.+.....++... .+..|++.||+|+|+... .+.+...++.+.+...... . .++
T Consensus 238 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~-~-~~~ 315 (402)
T TIGR00897 238 LFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQH-F-GHS 315 (402)
T ss_pred HHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHc-c-CCc
Confidence 34555677887778999999888765555566654 789999999999988764 3333333333332221110 0 124
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHH
Q 015916 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCL 187 (398)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 187 (398)
.+.++++.++.|++.+.. .+......+..|++||++.|+.+....+|+.+.|.+.+.+++..++...+.+.++..++..
T Consensus 316 ~~~~~~~~~~~G~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~ 394 (402)
T TIGR00897 316 FAVALIIAIALGIFLAGY-VPLAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSA 394 (402)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence 555555666777766643 3344556677788999999999999999999999999988876555555555555555555
Q ss_pred hhhhccc
Q 015916 188 GAIFFLR 194 (398)
Q Consensus 188 ~~~~~l~ 194 (398)
+..+++|
T Consensus 395 ~~~~~~~ 401 (402)
T TIGR00897 395 FLTAFIR 401 (402)
T ss_pred HHHHHhc
Confidence 5555544
No 110
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.05 E-value=2.7e-09 Score=106.40 Aligned_cols=149 Identities=13% Similarity=0.092 Sum_probs=107.8
Q ss_pred cCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhh
Q 015916 44 MNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNST 122 (398)
Q Consensus 44 ~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~ 122 (398)
.+.+..+.+++.....+... ..++.|++.||+|+|+.+..+.++..++.++.++. ++.+.+.+.+++.|++.
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~-------~~~~~~~~~~~l~g~~~ 329 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA-------TGPLEVSILKLLHAFEV 329 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc-------ccHHHHHHHHHHHHHHH
Confidence 46677777776555555554 47899999999999999999999888888777653 35666677788888877
Q ss_pred hhhhhHHHHHHHHhhccC-CcchHHH-HHhhhhhhHHHHHHHHHhHcCCChhHHHHH-HHHHHHHHHHhhhhcccccCCC
Q 015916 123 TWMNTAVLVTCIRNFRRN-RGPVSGI-LKGYVGLSTAIFTDLCSALFADDPAKFLFM-LAIVPFVVCLGAIFFLRETTPA 199 (398)
Q Consensus 123 g~~~~~~~~~~~~~Fp~~-RG~a~gi-~~~~~glg~~i~~~l~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~l~~~p~~ 199 (398)
+.........+.+++|++ |+++.+. .+...++|+.+.+++.+.+.+..+++..+. .+++..+..++..+.+|++|++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 409 (420)
T PRK09528 330 PFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDREL 409 (420)
T ss_pred HHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCchh
Confidence 766666677888999864 8887655 456678999999999988887644544444 4555555555555666665554
No 111
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.02 E-value=6e-09 Score=101.11 Aligned_cols=143 Identities=13% Similarity=-0.036 Sum_probs=103.3
Q ss_pred cHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHH
Q 015916 36 YSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVF 114 (398)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~ 114 (398)
+.+++.+++|++..+.+++.....++... .++.|++.||+|+|+.+.++.++..++++.+.+.. +.+.+.++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 301 (377)
T TIGR00890 227 LYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIP-----MLNDVLFLAT 301 (377)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcc-----cchhHHHHHH
Confidence 44556677899988888866666666654 78999999999999999999988888877665431 0122223334
Q ss_pred HHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHH
Q 015916 115 LCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPF 183 (398)
Q Consensus 115 ~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 183 (398)
.++.|++.+..+......+.+.+|+ +||++.|+......+|+.+.+.+.+.+.+..+++..+.+..+..
T Consensus 302 ~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~ 371 (377)
T TIGR00890 302 VALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFA 371 (377)
T ss_pred HHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHH
Confidence 4556666665555555678899985 69999999999999999999999888877655655555444333
No 112
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.01 E-value=7.1e-09 Score=102.46 Aligned_cols=156 Identities=17% Similarity=0.191 Sum_probs=110.2
Q ss_pred ccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Q 015916 35 NYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~ 113 (398)
.+.+.+.++.|++. .++......++... .++.|++.||+|+|+.+..+..+..+++++..+. ++.+.+.+
T Consensus 237 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 307 (399)
T PRK05122 237 TFITLYYAARGWDG--AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA-------PSPWMALI 307 (399)
T ss_pred HHHHHHHHHccccc--chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh-------ccHHHHHH
Confidence 34454444556643 33433334445444 6889999999999999999988888887766543 34555666
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhc
Q 015916 114 FLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFF 192 (398)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 192 (398)
..++.|++.+..+........+.+| ++||++.|+......+|..+.+++.+.+.+..+++..+.+..+..+++++..++
T Consensus 308 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 308 GAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWL 387 (399)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888888766555566778887 469999999999999999999988888776545666666666666666666666
Q ss_pred ccccCCC
Q 015916 193 LRETTPA 199 (398)
Q Consensus 193 l~~~p~~ 199 (398)
+++.+++
T Consensus 388 ~~~~~~~ 394 (399)
T PRK05122 388 LYRRAPR 394 (399)
T ss_pred hcccccc
Confidence 6555543
No 113
>PRK09669 putative symporter YagG; Provisional
Probab=99.01 E-value=6.8e-09 Score=104.43 Aligned_cols=124 Identities=13% Similarity=-0.054 Sum_probs=81.4
Q ss_pred HHHHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcc----cCch-HHHHHHHHHHHHHHHHHHHHHhcccCCchHHHH
Q 015916 38 DALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDR----IPAP-IILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (398)
Q Consensus 38 ~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr----~G~r-~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l 111 (398)
..+.+.+|+|..+++.+....-+.. +..|+.|+++|| +||| +.++.+.+..++..+++.... +.......+.+
T Consensus 34 ~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p-~~~~~~~~~~~ 112 (444)
T PRK09669 34 YFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTP-DFGATGKIIYA 112 (444)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCC-CCCcchHHHHH
Confidence 3467889999999999666555555 458999999999 7774 556577777777766554321 10001223444
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHhhc--cCCcchHHHHHhhhhhhHHHHHHH
Q 015916 112 CVFLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDL 162 (398)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~~l 162 (398)
++..++.+.+......+..+...++.+ ++|++..+.-..+..+|+.+.+.+
T Consensus 113 ~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~ 165 (444)
T PRK09669 113 CVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVI 165 (444)
T ss_pred HHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445555555555666677788875 569988888777777776665544
No 114
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.99 E-value=4.2e-09 Score=105.39 Aligned_cols=257 Identities=12% Similarity=0.026 Sum_probs=151.9
Q ss_pred HHHHHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhc----ccCchHHHH-HHHHHHHHHHHHHHHH-HhcccCCchHH
Q 015916 37 SDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASD----RIPAPIILL-IGSLEGLVGYGAQWLV-VSRKIQPLSYW 109 (398)
Q Consensus 37 ~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~D----r~G~r~~~~-~g~~~~~ig~~~~~~~-~~~~~~~~~~~ 109 (398)
.+.+.+.+|++...++.+....-+-. ...|+.|.++| |+|||+..+ +|.+..++++++++.. ..+........
T Consensus 25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~ 104 (428)
T PF13347_consen 25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLV 104 (428)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHH
Confidence 34467888999999999655555554 45899999999 899777655 6778888888887653 11111111222
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhc--cCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHH
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCL 187 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 187 (398)
.+++..++..++......+..+...+..+ ++|.+..+.-..+..+|+.+.+.+...+.+.
T Consensus 105 ~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~------------------ 166 (428)
T PF13347_consen 105 WLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSW------------------ 166 (428)
T ss_pred HHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhh------------------
Confidence 33444555567777666777777888886 3699999998888777776555554443321
Q ss_pred hhhhcccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhcccccccccc
Q 015916 188 GAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWN 267 (398)
Q Consensus 188 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~ 267 (398)
... ++...+++......+.+.+ +...+.... .+|
T Consensus 167 ------------~g~-~~~~~~~~~~~~v~~iv~~----------------------------v~~~i~~~~---~ke-- 200 (428)
T PF13347_consen 167 ------------FGG-GDTSNGYRWMALVLAIVGL----------------------------VFFLITFFF---VKE-- 200 (428)
T ss_pred ------------hcc-CccchHHHHHHHHHHHHHH----------------------------HHhhhhhhe---eee--
Confidence 000 0001133332211111000 000000000 110
Q ss_pred ccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccc
Q 015916 268 LNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGT 347 (398)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~ 347 (398)
++. +.+ +++ + ........++.+|++.|+.+.+..++....
T Consensus 201 -~~~-----------~~~-------------------~~~------~---~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~ 240 (428)
T PF13347_consen 201 -RSV-----------EVT-------------------EQE------K---KISLRDSLRSLFRNRPFRILLLAFFLQWLA 240 (428)
T ss_pred -ccc-----------ccc-------------------ccc------c---ccccccchhhhcccchHHHHHHHHHHHHhh
Confidence 000 000 000 0 000122468899999999998888877555
Q ss_pred eeeeeechHHHHHHh-CCCc-hhHHHHHHHHHHHHhhhhhhhhhHHHHhHhc
Q 015916 348 GLAVMNNMGQIGLAL-GYVD-VSIFVSLTSIWGFFGRIISGSVSEYFIKMVH 397 (398)
Q Consensus 348 g~~~~~n~~~i~~~~-g~~~-~a~~vsl~si~~~~GRl~~G~lsD~~~~~~~ 397 (398)
.....+....+.+.. |.++ .+....+..+.+.++-+++++++||+++|+.
T Consensus 241 ~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~ 292 (428)
T PF13347_consen 241 FALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV 292 (428)
T ss_pred hhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceee
Confidence 555555555555553 4443 4567778899999999999999999999874
No 115
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.97 E-value=1.5e-08 Score=100.84 Aligned_cols=158 Identities=15% Similarity=0.117 Sum_probs=115.3
Q ss_pred cccHHHHHHH-cCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHH
Q 015916 34 SNYSDALKTL-MNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (398)
Q Consensus 34 s~~~~~l~~~-~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l 111 (398)
..+.|.+.++ +|.+..+.+++.....++... .++.|++.||.++++.+..+.++.+++.+++.+. ++.+..
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~ 315 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM-------PMWILA 315 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc-------chHHHH
Confidence 3455665444 899999988876666677655 6889999999988888888888887777665432 345555
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCC-ChhHHHHHHHHHHHHHHHhh
Q 015916 112 CVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVCLGA 189 (398)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~~ 189 (398)
.+..++.|++.+.........+.+.+|+ +||++.|+......+|..+.+.+.+.+.+. +....+...+++..+++++.
T Consensus 316 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 395 (417)
T PRK10489 316 VLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLL 395 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH
Confidence 5666777777776555556678889986 599999999998889999999998888765 33445555566666666666
Q ss_pred hhcccccCC
Q 015916 190 IFFLRETTP 198 (398)
Q Consensus 190 ~~~l~~~p~ 198 (398)
...+++.++
T Consensus 396 ~~~~~~~~~ 404 (417)
T PRK10489 396 LLVLGELRR 404 (417)
T ss_pred HHhcccccc
Confidence 666666554
No 116
>PRK03545 putative arabinose transporter; Provisional
Probab=98.97 E-value=2.6e-08 Score=98.25 Aligned_cols=154 Identities=13% Similarity=0.073 Sum_probs=102.9
Q ss_pred HHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHH
Q 015916 38 DALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLC 116 (398)
Q Consensus 38 ~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~ 116 (398)
+.+++++|.|..+.+++.....++... .++.|++.||+|+|+. ..+..+..++....... . ++.+.+++..+
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~l~~~-~-----~~~~~~~~~~~ 302 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-LIAIALLLVCLLLLLPA-A-----NSEWHLSVLSI 302 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHHH-h-----chHHHHHHHHH
Confidence 335667899998888866655666654 7899999999998764 45555554444433221 1 34566666677
Q ss_pred HHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHH-hhhhcccc
Q 015916 117 MGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCL-GAIFFLRE 195 (398)
Q Consensus 117 l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~l~~ 195 (398)
+.|++.+.........+.+..|++||.+.|+......+|..+.+.+.+.+.+..+.+..+...++..++++ ......++
T Consensus 303 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
T PRK03545 303 FWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFRR 382 (390)
T ss_pred HHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHccc
Confidence 77777655444445566677788899999999998899999999998888877555555555544444444 44445554
Q ss_pred cCC
Q 015916 196 TTP 198 (398)
Q Consensus 196 ~p~ 198 (398)
+|.
T Consensus 383 ~~~ 385 (390)
T PRK03545 383 FPV 385 (390)
T ss_pred cch
Confidence 443
No 117
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.96 E-value=3.1e-08 Score=99.27 Aligned_cols=166 Identities=11% Similarity=0.006 Sum_probs=93.6
Q ss_pred cccccccHHHH-HHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCch
Q 015916 30 NYTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLS 107 (398)
Q Consensus 30 ~~~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~ 107 (398)
.|.+..+.|++ ++++|++..+.+.......+.. ..+++.|++.||+|+|+++.++.++..+........... . .+
T Consensus 259 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~-~--~~ 335 (432)
T PRK10406 259 FYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQN-V--SS 335 (432)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHc-C--Cc
Confidence 34555667774 6678999988887544444443 457888999999999998887766544433322211111 1 12
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhh-hHHHHHHHHHhHcCC-ChhHHHHHHHHHHHH
Q 015916 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGL-STAIFTDLCSALFAD-DPAKFLFMLAIVPFV 184 (398)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~gl-g~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~ 184 (398)
.+.......+.+...+..........+++||+ +||++.|+......+ .+...+.+.. +++. +.+...++..++..+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~-~l~~~g~~~~~~~~~~~~~~ 414 (432)
T PRK10406 336 PYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL-SLKSIGMETAFFWYVTLMAV 414 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH-HHHHhCCCcHHHHHHHHHHH
Confidence 22222111222222222223345567899996 599999998765443 2333444444 4432 223444455555666
Q ss_pred HHHhhhhcccccCCC
Q 015916 185 VCLGAIFFLRETTPA 199 (398)
Q Consensus 185 i~~~~~~~l~~~p~~ 199 (398)
+.+++.++++++++.
T Consensus 415 i~~~~~~~l~~~~~~ 429 (432)
T PRK10406 415 VAFLVSLMLHRKGKG 429 (432)
T ss_pred HHHHHHHHhhhcccc
Confidence 666666666655543
No 118
>PRK03699 putative transporter; Provisional
Probab=98.95 E-value=1.4e-08 Score=100.50 Aligned_cols=159 Identities=10% Similarity=-0.045 Sum_probs=107.1
Q ss_pred ccccccHHHH-HHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Q 015916 31 YTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 31 ~~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~ 108 (398)
+.+..+.|.+ ++++|+|..+.+.+.+...++... .+..|++.||+|+|+.+.....+..++.++.... ++.
T Consensus 222 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~-------~~~ 294 (394)
T PRK03699 222 LTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNT-------DDP 294 (394)
T ss_pred HHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHc-------CCc
Confidence 4445567765 577899999988866665566554 6899999999999999888777666655544322 233
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHh
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG 188 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 188 (398)
+.+.+..++.|++.+..++.......+..|++++...|.......+|+.+.|.+.+.+.+..+++..++......+++++
T Consensus 295 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 295 SHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence 34444555666666655555555566666777888999998888999999999998887754444444444444444444
Q ss_pred hhhccccc
Q 015916 189 AIFFLRET 196 (398)
Q Consensus 189 ~~~~l~~~ 196 (398)
....+.+.
T Consensus 375 ~~~~~~~~ 382 (394)
T PRK03699 375 MCILLGFV 382 (394)
T ss_pred HHHHHHHH
Confidence 34444333
No 119
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.95 E-value=3.9e-09 Score=100.57 Aligned_cols=133 Identities=14% Similarity=0.070 Sum_probs=100.2
Q ss_pred cccccccccH-HHHHHHcCCCh----hhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhc
Q 015916 28 GNNYTFSNYS-DALKTLMNLTQ----LELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSR 101 (398)
Q Consensus 28 g~~~~~s~~~-~~l~~~~g~s~----~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~ 101 (398)
+..|-+.++. .+++...+-++ .-.+.+.+.+.+...+ ++..|.++||+|||+++++|.+..++.+.+.+.+
T Consensus 42 ~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S--- 118 (451)
T KOG2615|consen 42 SSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS--- 118 (451)
T ss_pred cchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH---
Confidence 3445554443 22333333333 3345567777777765 8999999999999999999999999988887764
Q ss_pred ccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 102 KIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 102 ~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
.++..+.+.|++.|+..|.. ....+++.+.++ |+|+++++.+...+++|-.+.|.+.+.+-.
T Consensus 119 ----~~F~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 119 ----RNFAAFVLARFLGGIFKGNL-SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred ----HHHHHHHHHHHhhhhccCch-HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 56744555699999999865 467888999997 569999999999999998888888777644
No 120
>PRK09952 shikimate transporter; Provisional
Probab=98.94 E-value=4.4e-08 Score=98.48 Aligned_cols=162 Identities=9% Similarity=0.083 Sum_probs=102.8
Q ss_pred ccccccHHHH-HHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Q 015916 31 YTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 31 ~~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~ 108 (398)
|....+.|++ ++++|.+..+...+.....+... ..++.|++.||+|+|+++..+.++..++...+...... ..+.
T Consensus 267 ~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 343 (438)
T PRK09952 267 YIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEA---QSIF 343 (438)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHc---CChH
Confidence 4344455554 67789888765544333333333 46889999999999999988877665554433332111 1223
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhh-hhhhHHHHHHHHHhHcCC--ChhHHHHHHHHHHHH
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGY-VGLSTAIFTDLCSALFAD--DPAKFLFMLAIVPFV 184 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~-~glg~~i~~~l~~~~~~~--~~~~~~~~~~~~~~~ 184 (398)
+.+.+..++.+++.+.........+.+.||+ .|+.+.|+.... ..+|+.+.|.+...+.+. +.+...+.+..+..+
T Consensus 344 ~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~ 423 (438)
T PRK09952 344 WIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCL 423 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 3333344555666665555566778899996 599998886543 457888889888888762 335555555666666
Q ss_pred HHHhhhhcccc
Q 015916 185 VCLGAIFFLRE 195 (398)
Q Consensus 185 i~~~~~~~l~~ 195 (398)
+..++.+.+|+
T Consensus 424 i~~v~~~~~~~ 434 (438)
T PRK09952 424 ISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHccc
Confidence 66666666654
No 121
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.94 E-value=3.7e-08 Score=97.10 Aligned_cols=140 Identities=11% Similarity=0.076 Sum_probs=109.8
Q ss_pred ccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHH
Q 015916 33 FSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (398)
Q Consensus 33 ~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l 111 (398)
+..+.|.+.+++|.+..+.+.......+.... .++.|++.||+|+|+++.++.+...+.++...+. ++.+.+
T Consensus 224 ~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~ 296 (382)
T TIGR00902 224 YYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI-------EAFPLI 296 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH-------hhHHHH
Confidence 33455666567999999999865555555554 6899999999999999999999999999887654 467778
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHH-hhhhhhHHHHHHHHHhHcCCChhHHHHHHHH
Q 015916 112 CVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILK-GYVGLSTAIFTDLCSALFADDPAKFLFMLAI 180 (398)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~-~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~ 180 (398)
++..++.|+..+....+....+.+. |+ +|+++.++.+ ...|+|..+.+.+.+.+.+......++..+.
T Consensus 297 ~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~~~~~~~ 366 (382)
T TIGR00902 297 FLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGTFVFMAI 366 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 8888999999998888888888887 75 6899999975 5678999999999988887644433333443
No 122
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.94 E-value=5.7e-08 Score=99.39 Aligned_cols=126 Identities=16% Similarity=0.141 Sum_probs=98.1
Q ss_pred HHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Q 015916 40 LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (398)
Q Consensus 40 l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (398)
+..+..-|...++++..+..+-.+ +++++|.+.||+.+|++++.+-++.++..+.+........ .++|.++++.++.
T Consensus 36 lv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~--~~~~~Ll~~~fl~ 113 (524)
T PF05977_consen 36 LVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGL--LSPWLLLILTFLL 113 (524)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCc--CCHHHHHHHHHHH
Confidence 444556677788887777777764 5999999999999999999999888776655544322111 3578888888999
Q ss_pred hhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 119 GNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
|++.++..++....+.+..|+ +...|+++......++..++|.+.+.++
T Consensus 114 g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lv 163 (524)
T PF05977_consen 114 GIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILV 163 (524)
T ss_pred HHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 999998878888888899996 5789999999888888888877776654
No 123
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.92 E-value=2e-08 Score=100.61 Aligned_cols=165 Identities=16% Similarity=0.083 Sum_probs=105.2
Q ss_pred cccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCC----c
Q 015916 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQP----L 106 (398)
Q Consensus 32 ~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~----~ 106 (398)
....+.|.+.+++|++..+.++......++.. ..++.|++.||+|+|+.+.++.++..++.+++.+........ .
T Consensus 302 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (481)
T TIGR00879 302 AIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSS 381 (481)
T ss_pred ehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccch
Confidence 34456777888899999777776655555554 478999999999999999999888888877765321111110 0
Q ss_pred hHHHHHH-HHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHH-HHHHHHH
Q 015916 107 SYWQMCV-FLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLF-MLAIVPF 183 (398)
Q Consensus 107 ~~~~l~~-~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~-~~~~~~~ 183 (398)
+...+.. ..+..+.+.+.. ......+.+.+|+ +||++.|+......+|+++.+.+...+.+...+.+.+ ..+++..
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~ 460 (481)
T TIGR00879 382 GNVAIVFILLFIAFFAMGWG-PVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNV 460 (481)
T ss_pred hHHHHHHHHHHHHHHHcccc-CeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHH
Confidence 2222222 222222233321 2334556899985 6999999999999999999999988887654444433 3333334
Q ss_pred HHHHhhhhcccccC
Q 015916 184 VVCLGAIFFLRETT 197 (398)
Q Consensus 184 ~i~~~~~~~l~~~p 197 (398)
+..++..++.|+++
T Consensus 461 ~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 461 LGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHheecccCC
Confidence 44444444555544
No 124
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.90 E-value=9.1e-08 Score=94.88 Aligned_cols=163 Identities=13% Similarity=0.084 Sum_probs=108.5
Q ss_pred cccccHHHH-HHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 32 TFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 32 ~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
.+..+.|.+ ++++|++..+.++......++... .++.|++.||+|+|+.+.++.++..++.+......... ..+.+
T Consensus 233 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~ 310 (406)
T PRK15402 233 AWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVIS--SHAYL 310 (406)
T ss_pred HHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcc--cccHH
Confidence 344445554 677999998888755544555554 68999999999999999999888888877766532111 12344
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHH-h
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCL-G 188 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~-~ 188 (398)
.+.+..++.|+|.+...+..........|++||++.++......+|..+.+.+.+.+.+...+......+....++.+ .
T Consensus 311 ~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 390 (406)
T PRK15402 311 WLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLL 390 (406)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHH
Confidence 555666777888776554444444344456899999999999999999999998888776544434444443333333 3
Q ss_pred hhhccccc
Q 015916 189 AIFFLRET 196 (398)
Q Consensus 189 ~~~~l~~~ 196 (398)
...++|+.
T Consensus 391 ~~~~~~~~ 398 (406)
T PRK15402 391 VRIFLKDK 398 (406)
T ss_pred HHHHhccC
Confidence 33344443
No 125
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.89 E-value=2.9e-08 Score=96.87 Aligned_cols=137 Identities=13% Similarity=-0.020 Sum_probs=92.7
Q ss_pred cccccccHHHH-HHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCch
Q 015916 30 NYTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLS 107 (398)
Q Consensus 30 ~~~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~ 107 (398)
.+....+.|.+ ++++|.+..+.+.+.....++... .++.|++.||+|+|+.+..+..+..+........... ..+
T Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 311 (394)
T TIGR00883 235 FYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLD---SGS 311 (394)
T ss_pred HHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhc---CCc
Confidence 34445566665 577899998888865555566554 7899999999999998876655544332211111111 124
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHH-HhhhhhhHHHHHHHHHhHcCC
Q 015916 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGIL-KGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~-~~~~glg~~i~~~l~~~~~~~ 169 (398)
.+.+.+..++.|++.+..+.+....+.+.+|+ +|+++.|+. ..+..+|+.+.|.+.+.+.+.
T Consensus 312 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~ 375 (394)
T TIGR00883 312 FTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM 375 (394)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH
Confidence 45555556677777776777778889999996 599999985 344557777888888777664
No 126
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.88 E-value=1.7e-07 Score=94.61 Aligned_cols=137 Identities=6% Similarity=-0.035 Sum_probs=90.3
Q ss_pred cccccccc---cHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhc----ccCchHHHHHH-HHHHHHHHHHHHHH
Q 015916 28 GNNYTFSN---YSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASD----RIPAPIILLIG-SLEGLVGYGAQWLV 98 (398)
Q Consensus 28 g~~~~~s~---~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~D----r~G~r~~~~~g-~~~~~ig~~~~~~~ 98 (398)
|..++|+. +.+++.+++|.+..+.+++.....+... ..|+.|+++| |+|||+.++++ .+...++++++.++
T Consensus 15 Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~ 94 (477)
T TIGR01301 15 GVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFA 94 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhC
Confidence 44444443 4455678899999999997666666554 5899999999 59999998875 55555666666543
Q ss_pred Hhc------ccCCc-hH---HHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CC--cchHHHHHhhhhhhHHHHHHHHH
Q 015916 99 VSR------KIQPL-SY---WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NR--GPVSGILKGYVGLSTAIFTDLCS 164 (398)
Q Consensus 99 ~~~------~~~~~-~~---~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~R--G~a~gi~~~~~glg~~i~~~l~~ 164 (398)
-.- ..... .. +...+...+..++......+..+.+++.+|+ +| +.+.++.....++|+.+.+.+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~ 173 (477)
T TIGR01301 95 ADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGA 173 (477)
T ss_pred chhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 00000 01 1222233344556666667778889999984 33 78999998888999888777654
No 127
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.87 E-value=1.1e-07 Score=92.93 Aligned_cols=131 Identities=16% Similarity=0.123 Sum_probs=94.6
Q ss_pred cccccHHH-HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 32 TFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 32 ~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
.+..+.|. +++++|++..+.+++.....++... .++.|++.||+|+|+.+..+..+..++.+++........ .+.+
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 301 (385)
T TIGR00710 224 AFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGL--GSWA 301 (385)
T ss_pred HHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc--chHH
Confidence 33344454 4668999999999876666666654 789999999999999999998888877766654321110 1233
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHH
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCS 164 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~ 164 (398)
.+.....+.|++.+..+........+.+|++||++.++.......++.+.+++..
T Consensus 302 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 302 MIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344566677877777766777777888988999999988877777777777766
No 128
>PRK10504 putative transporter; Provisional
Probab=98.86 E-value=8.6e-08 Score=96.99 Aligned_cols=130 Identities=11% Similarity=0.053 Sum_probs=95.2
Q ss_pred ccHHHH-HHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHH
Q 015916 35 NYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (398)
Q Consensus 35 ~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~ 112 (398)
.+.|.+ +..+|.+..+.++......++... .++.|++.||+|+|+++.++.++..++..++.+... ..+.+.+.
T Consensus 282 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 357 (471)
T PRK10504 282 FMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL----LGWYYLLP 357 (471)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc----cccHHHHH
Confidence 345554 446899998888866666666654 689999999999999999999888877766554211 12333334
Q ss_pred HHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 113 VFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
+..++.|++.+..+.+......+.+|+ .||.+.|+.+....+|..+.+.+.+.+++
T Consensus 358 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 358 FVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666777777777777778888885 59999999999888888888877766653
No 129
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.85 E-value=1.1e-07 Score=97.06 Aligned_cols=156 Identities=11% Similarity=0.105 Sum_probs=105.5
Q ss_pred HHHHHHcCCChhhHHHHH-HHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHH
Q 015916 38 DALKTLMNLTQLELNNLS-VVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFL 115 (398)
Q Consensus 38 ~~l~~~~g~s~~~~~~i~-~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~ 115 (398)
|.+.+++|++..+.+++. ....++... .+++|++.||+|+|+.+.++.++.+++.+........ .++.+.+.+..
T Consensus 247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~---~~~~~~l~~~~ 323 (491)
T PRK11010 247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT---DKNLYSMGAAV 323 (491)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHHHH
Confidence 445678999999999864 455556555 6899999999999998887776655544333221111 12333333333
Q ss_pred HHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhccc
Q 015916 116 CMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLR 194 (398)
Q Consensus 116 ~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~ 194 (398)
++..+..|..+.+......+..|+ .+++..|+.++..++|..+.+++.+.+.+..+++..+.+..+..+.+++....+|
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333343344456667778886 4899999999999999999999888888765676666667767777777776666
Q ss_pred cc
Q 015916 195 ET 196 (398)
Q Consensus 195 ~~ 196 (398)
+.
T Consensus 404 ~~ 405 (491)
T PRK11010 404 QT 405 (491)
T ss_pred hc
Confidence 54
No 130
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.85 E-value=1.6e-07 Score=91.62 Aligned_cols=165 Identities=12% Similarity=0.011 Sum_probs=124.2
Q ss_pred HhcccccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccC
Q 015916 26 ISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQ 104 (398)
Q Consensus 26 ~~g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~ 104 (398)
..|..-.|+...|.+++..|.|.++++++...+.++..+ ..++|++.|| ++|+.+.....+..+.++.+.+. .
T Consensus 224 ~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~--~--- 297 (394)
T COG2814 224 MTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFT--G--- 297 (394)
T ss_pred HcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHh--c---
Confidence 345555666677888999999999999988888888876 6999999999 99999999988888887776654 1
Q ss_pred CchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHH
Q 015916 105 PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFV 184 (398)
Q Consensus 105 ~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 184 (398)
.+.+...+.-++.|++.+..-..-..-.++..|+.++.+.++..+.+.+|.++.+.+.+.++++.......+.+....+
T Consensus 298 -~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~ 376 (394)
T COG2814 298 -ASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLL 376 (394)
T ss_pred -chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Confidence 2344444444456665554434444445565578999999999999999999999999999988777777777777777
Q ss_pred HHHhhhhcccccC
Q 015916 185 VCLGAIFFLRETT 197 (398)
Q Consensus 185 i~~~~~~~l~~~p 197 (398)
++++..+..+..+
T Consensus 377 ~a~~~~~~~~~~~ 389 (394)
T COG2814 377 LALLLALLSARKD 389 (394)
T ss_pred HHHHHHHHHHhcc
Confidence 7776666554433
No 131
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.84 E-value=8.7e-08 Score=96.12 Aligned_cols=138 Identities=13% Similarity=0.063 Sum_probs=87.4
Q ss_pred cccccccccHHHH-HHHcCCChhhHHHH-HHHHHhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 015916 28 GNNYTFSNYSDAL-KTLMNLTQLELNNL-SVVKDIGKAFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQP 105 (398)
Q Consensus 28 g~~~~~s~~~~~l-~~~~g~s~~~~~~i-~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~ 105 (398)
|...+++.+.|.+ ++++ +....... .....++.+..|++|+++||+|+|+++.++.+...++.......... .++
T Consensus 266 G~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~-~~~ 342 (462)
T PRK15034 266 GSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPG-TGS 342 (462)
T ss_pred HHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcc-ccc
Confidence 3433455566665 4444 33322222 22223344557999999999999999999998887776554433211 111
Q ss_pred chHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc----------------------CCcchHHHHHhhhhhhHHHHHHHH
Q 015916 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR----------------------NRGPVSGILKGYVGLSTAIFTDLC 163 (398)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~----------------------~RG~a~gi~~~~~glg~~i~~~l~ 163 (398)
.+++.+.+..+...+..|..+.+....+.+.||+ +-|.+.|+..+..++|+++.|.++
T Consensus 343 ~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~ 422 (462)
T PRK15034 343 GNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAF 422 (462)
T ss_pred cHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHH
Confidence 2444444433333344455555667788888884 347889999999999999999998
Q ss_pred HhHcC
Q 015916 164 SALFA 168 (398)
Q Consensus 164 ~~~~~ 168 (398)
+...+
T Consensus 423 g~~~~ 427 (462)
T PRK15034 423 GMSLN 427 (462)
T ss_pred HHHHH
Confidence 88765
No 132
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.84 E-value=3.6e-08 Score=99.58 Aligned_cols=127 Identities=12% Similarity=-0.009 Sum_probs=91.8
Q ss_pred ccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcc--cCchHHHHHHHHHH--HHHHHHHHHHHhcccCCchHH
Q 015916 35 NYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDR--IPAPIILLIGSLEG--LVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr--~G~r~~~~~g~~~~--~ig~~~~~~~~~~~~~~~~~~ 109 (398)
.+.|++.+++|++..+.+++.....++..+ .++.|++.|| +++|+...++.... ++++++..+. ++++
T Consensus 262 ~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~-------~~~~ 334 (455)
T TIGR00892 262 IFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA-------GDYT 334 (455)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh-------chHH
Confidence 456666677899999998865555666654 7899999998 44554444443333 3333333221 3566
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
.+++.+++.|++.+.........+.+.+|+ +||++.|+..+...+|+++.+.+.+.+.+
T Consensus 335 ~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 335 GLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 677788888888877766777778888885 68999999999999999999999887765
No 133
>PRK12382 putative transporter; Provisional
Probab=98.83 E-value=4.9e-08 Score=96.28 Aligned_cols=148 Identities=14% Similarity=0.147 Sum_probs=103.4
Q ss_pred ccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Q 015916 35 NYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~ 113 (398)
.+.+.+-++.+++.. +.......++.. ..++.|++.||+|+|+.+..+..+..+++++..+. ++.+.+.+
T Consensus 237 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 307 (392)
T PRK12382 237 TFVSLYFASKGWAMA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA-------PTAWVALA 307 (392)
T ss_pred HHHHHHHHhcCCchh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc-------ccHHHHHH
Confidence 444555455676643 333333344444 46899999999999999999998888888766542 34555566
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhh
Q 015916 114 FLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIF 191 (398)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 191 (398)
..++.|++.+..+........+.+| ++||++.|+......+|.++.+.+.+.+.+..+++..+.+.....++.++..+
T Consensus 308 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 308 GAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 7778888877666555566778887 57999999999999999999999999888765555554444444444444333
No 134
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.83 E-value=1.2e-07 Score=94.49 Aligned_cols=135 Identities=15% Similarity=0.078 Sum_probs=87.8
Q ss_pred ccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
+....+.|.+.++.|.+..+.+.+.....++... .++.|++.||+|+|+.+..+.++..++.+..... .. .+..
T Consensus 248 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~ 322 (426)
T PRK12307 248 WPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRI-PQ----DNYL 322 (426)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH-cc----ccHH
Confidence 3344566777667899988888765555555554 7899999999999999998887776665544322 11 1222
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCC
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADD 170 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~ 170 (398)
.+.+..+..+.+...........+.+.+|+ +||++.|+......+|+.+.+.+.+.+.+..
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~ 384 (426)
T PRK12307 323 LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM 384 (426)
T ss_pred HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc
Confidence 211111111111111112233567899995 5999999999998999999988888876653
No 135
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.82 E-value=1.1e-07 Score=93.93 Aligned_cols=128 Identities=13% Similarity=0.051 Sum_probs=92.3
Q ss_pred HHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHh
Q 015916 58 KDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRN 136 (398)
Q Consensus 58 ~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~ 136 (398)
..++.. ..+..|++.||+|+|+++..+.....++.+...+. ++.+.+++.+++.|++.+...+.....+.+.
T Consensus 267 ~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 267 PGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV-------QTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 334444 46889999999999999999888777776655442 3456666777888888887766666666666
Q ss_pred hcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhc
Q 015916 137 FRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFF 192 (398)
Q Consensus 137 Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 192 (398)
.|+ +||++.|+......+|..+.+.+.+.+.+...++..+.+.....++..+..++
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 674 69999999999999999999988888776655555555555444444444443
No 136
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.82 E-value=7.8e-08 Score=98.36 Aligned_cols=136 Identities=13% Similarity=0.026 Sum_probs=85.9
Q ss_pred cccccccHHHHHHHcCCChhhHHH------------HHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHH
Q 015916 30 NYTFSNYSDALKTLMNLTQLELNN------------LSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQW 96 (398)
Q Consensus 30 ~~~~s~~~~~l~~~~g~s~~~~~~------------i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~ 96 (398)
.|....+.|.+.++.|++..+.+. ......++... .++.+++.||+|||++++++.++.+++..++.
T Consensus 304 ~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~ 383 (502)
T TIGR00887 304 FYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLG 383 (502)
T ss_pred HHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHH
Confidence 456666788877788886542211 11222233333 47889999999999999999888887776666
Q ss_pred HHHhcccCCchHHHHHH-HHHHHhhhhhhhhhHHHHHHHHhhccC-CcchHHHHHhhhhhhHHHHHHHHHhHcCC
Q 015916 97 LVVSRKIQPLSYWQMCV-FLCMGGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 97 ~~~~~~~~~~~~~~l~~-~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 169 (398)
..... .+......++. +....+.+. .........|.||.+ ||++.|+..+...+++++.+.+...+.+.
T Consensus 384 ~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 454 (502)
T TIGR00887 384 FAYNH-LSTHGFLAIYVLAQFFANFGP---NATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQH 454 (502)
T ss_pred HHHHh-cchhHHHHHHHHHHHHHhcCC---CchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcc
Confidence 54221 00011111111 111112221 123445568999965 99999999999999999999998888763
No 137
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.81 E-value=1.8e-07 Score=92.68 Aligned_cols=153 Identities=11% Similarity=0.051 Sum_probs=102.4
Q ss_pred ccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
+....+.|++-+++|++..+.+.......++... .+..|++.||+|+|+.+.++..+..+++..+... . .+..
T Consensus 222 ~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~--~----~~~~ 295 (393)
T PRK09705 222 ASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWL--P----LQLP 295 (393)
T ss_pred HHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHc--c----chHH
Confidence 3444566776666899999998866666677655 6899999999999999999888777776654321 1 1111
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhc--cCCcchHHHHHhhhhhhHHHHHHHHHhHcCC-ChhHHHHHHHHHHHHHH
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVC 186 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~i~ 186 (398)
.+. .++.|++.+..+........+.++ ++||++.|+......+++.+.+.+.+.+.+. +.+...+.+..+.+++.
T Consensus 296 ~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~ 373 (393)
T PRK09705 296 VLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGL 373 (393)
T ss_pred HHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 121 234566666555555555556664 3689999999998889989999888888764 23444444444444444
Q ss_pred Hhhhh
Q 015916 187 LGAIF 191 (398)
Q Consensus 187 ~~~~~ 191 (398)
+++..
T Consensus 374 ~~~~~ 378 (393)
T PRK09705 374 MIITL 378 (393)
T ss_pred HHHHH
Confidence 44433
No 138
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.81 E-value=8.6e-08 Score=97.34 Aligned_cols=124 Identities=16% Similarity=0.093 Sum_probs=78.9
Q ss_pred HHHHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhc----ccCc-hHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHH
Q 015916 38 DALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASD----RIPA-PIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (398)
Q Consensus 38 ~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~D----r~G~-r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l 111 (398)
..+.+.+|++..+++.+....-+.. +..|+.|.++| |+|| |+-+++|.+..++++++++.. .+......++.+
T Consensus 31 ~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~-p~~~~~~~~~~~ 109 (473)
T PRK10429 31 YYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSA-HLFEGTAQYVFV 109 (473)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcC-CCCCccHHHHHH
Confidence 3467788999999999655544444 45899999999 6699 556667887878877666432 110001123333
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHhhc--cCCcchHHHHHhhhhhhHHHHHHH
Q 015916 112 CVFLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDL 162 (398)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~~l 162 (398)
++..++.+.+..+..++..+...+.-+ ++|.+..+.-..+..+|+.+.+.+
T Consensus 110 ~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~ 162 (473)
T PRK10429 110 CVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGF 162 (473)
T ss_pred HHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455566666666666667777663 569998888666556665555443
No 139
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.80 E-value=2e-07 Score=91.85 Aligned_cols=131 Identities=15% Similarity=0.073 Sum_probs=98.5
Q ss_pred ccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Q 015916 35 NYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~ 113 (398)
.+.|.+-++.|++..+.+.+.....++... .++.|++.||+|+|+++.++.+..+++++..... ++.+.+.+
T Consensus 226 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~ 298 (382)
T PRK11128 226 GFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST-------TALPWLIV 298 (382)
T ss_pred HHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh-------hhHHHHHH
Confidence 344555567999998888865555555544 6899999999999999999999888887766543 45677777
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHH-hhhhhhHHHHHHHHHhHcCCChh
Q 015916 114 FLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILK-GYVGLSTAIFTDLCSALFADDPA 172 (398)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~-~~~glg~~i~~~l~~~~~~~~~~ 172 (398)
..++.|++.+..+........+..+++++++.++.. ...++|..+.+.+.+.+.+....
T Consensus 299 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~ 358 (382)
T PRK11128 299 IQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA 358 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 788888888877666666677765567888888876 44677778888888888775433
No 140
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.80 E-value=1.6e-07 Score=92.40 Aligned_cols=141 Identities=9% Similarity=0.049 Sum_probs=96.9
Q ss_pred cHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHH
Q 015916 36 YSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVF 114 (398)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~ 114 (398)
+.|.+.++.|.+..+.+++.....++... .++.|++.||+|+|+++..+.++..++.+... . . ......
T Consensus 222 ~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~--------~-~~~~~~ 291 (381)
T PRK03633 222 LMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-S--------Q-AAMAPA 291 (381)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-h--------h-HHHHHH
Confidence 45666667899988888865555555554 78899999999999999988888777765442 1 0 111223
Q ss_pred HHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHH
Q 015916 115 LCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVC 186 (398)
Q Consensus 115 ~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~ 186 (398)
.++.|.+....++.....+.+..|+ +++.+.+.....+++|+++.|.+.+.+.+...+.+.+.+.....++.
T Consensus 292 ~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~ 364 (381)
T PRK03633 292 LFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIY 364 (381)
T ss_pred HHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHH
Confidence 3444554444556666667788875 57778888888889999999999998887655555544444444333
No 141
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.80 E-value=1.6e-07 Score=95.04 Aligned_cols=129 Identities=11% Similarity=0.022 Sum_probs=86.8
Q ss_pred ccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Q 015916 35 NYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~ 113 (398)
.+.|.+.+++|.+..+..+......+... ..++.|++.||+|+|++++.+.++.+++.+.+........ .+.+. ..
T Consensus 292 ~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~--~~~~~-~~ 368 (479)
T PRK10077 292 YYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQA--PGIVA-LL 368 (479)
T ss_pred HHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCc--ccHHH-HH
Confidence 45677878899887766665444444444 4789999999999999999999999998887764322111 11221 12
Q ss_pred HHHHHhhhhhhhh-hHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhH
Q 015916 114 FLCMGGNSTTWMN-TAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSAL 166 (398)
Q Consensus 114 ~~~l~G~g~g~~~-~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~ 166 (398)
+.++.+.+.+... +.....+.+.||+ +||.++|+..+...+|+.+.+.+...+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~ 423 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMM 423 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 2223333333222 3456778899985 699999999998888888776665433
No 142
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.79 E-value=4.4e-07 Score=92.06 Aligned_cols=155 Identities=18% Similarity=0.192 Sum_probs=99.1
Q ss_pred ccHHHHHHHcCCChhhHHHHHHHHHhhhhhhhhhhhhhcccC-----chHHHHHHHHHHH-HHHHHHHHHHhcccCCchH
Q 015916 35 NYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRIP-----APIILLIGSLEGL-VGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G-----~r~~~~~g~~~~~-ig~~~~~~~~~~~~~~~~~ 108 (398)
...+.+++++|+|.++++.+.+...+...+.++.|++.||++ ||+.++++.++.. +++..+.. .+ ...
T Consensus 47 ~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~-----~~-~~~ 120 (468)
T TIGR00788 47 PLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPG-----KV-SSA 120 (468)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhccc-----cc-chH
Confidence 344557889999999998877767777777888999999998 7888888877663 33332221 11 122
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHH---hhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHH
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILK---GYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVV 185 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~---~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i 185 (398)
....+..++.+++.+..+.+.-....+..+++++...+... ...++|..+.+.+.+.+.+...|+..+++.....++
T Consensus 121 ~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll 200 (468)
T TIGR00788 121 KVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLL 200 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 22333677888888888888888999999854544333333 333478778777777666543455444443333333
Q ss_pred HHhhhhcccc
Q 015916 186 CLGAIFFLRE 195 (398)
Q Consensus 186 ~~~~~~~l~~ 195 (398)
.+...++++|
T Consensus 201 ~~~~~~~~~E 210 (468)
T TIGR00788 201 QLFVSNLSKE 210 (468)
T ss_pred HHHHHHhccc
Confidence 3333444444
No 143
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.78 E-value=3.4e-08 Score=95.59 Aligned_cols=141 Identities=20% Similarity=0.155 Sum_probs=104.6
Q ss_pred HHhcccccccccHHH-HHHHcCCChhhHHHHHHH-HHhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcc
Q 015916 25 AISGNNYTFSNYSDA-LKTLMNLTQLELNNLSVV-KDIGKAFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRK 102 (398)
Q Consensus 25 ~~~g~~~~~s~~~~~-l~~~~g~s~~~~~~i~~~-~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~ 102 (398)
.+.|..-.++.+.|. ++++|+.+..+.+.+... ..++.+.=+.+|+++||+|.++++.+..+.++++..+.++.....
T Consensus 229 ~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~ 308 (417)
T COG2223 229 ATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGF 308 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHcccccc
Confidence 344555566777776 588999999998875444 444555679999999999999999999999998888777643221
Q ss_pred cCCchHHHH----HHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCC
Q 015916 103 IQPLSYWQM----CVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 103 ~~~~~~~~l----~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 169 (398)
....+.+.. ....+..|+|.|. ....+...||++-|.+.|+..+..++|+...|.......+.
T Consensus 309 ~~~~~~~~~~~~~l~l~~~~G~GnGs----vfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~ 375 (417)
T COG2223 309 GHGGSFVVFVAVFLALFVFAGLGNGS----VFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDL 375 (417)
T ss_pred ccCcchHHHHHHHHHHHHHhccCcch----heeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHh
Confidence 101222222 2245666666664 45789999999999999999999999999999888887764
No 144
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.77 E-value=1.8e-07 Score=95.25 Aligned_cols=135 Identities=11% Similarity=0.035 Sum_probs=92.2
Q ss_pred cccHHHHH-HHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHH
Q 015916 34 SNYSDALK-TLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (398)
Q Consensus 34 s~~~~~l~-~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l 111 (398)
..+.|.+. +++|++..+.+++.+...++... .++.|++.||+|+|+++.++.++..++.+..... . ..+.+.+
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~ 369 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI-G----GANVWVL 369 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc-c----ccHHHHH
Confidence 34566654 68999999999977766777655 7899999999999999888877666655443321 1 1233333
Q ss_pred HHHHHHH-hhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHH
Q 015916 112 CVFLCMG-GNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKF 174 (398)
Q Consensus 112 ~~~~~l~-G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~ 174 (398)
.+..++. +.+.+. .......+.+.+|+ +||+++|+..+...+|+.+.+.+.+.+.+..+++.
T Consensus 370 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~ 433 (496)
T PRK03893 370 GLLLFFQQMLGQGI-SGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGT 433 (496)
T ss_pred HHHHHHHHHHhccc-chhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHH
Confidence 3332222 222232 23344567788885 69999999999999999999988888776544443
No 145
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.76 E-value=1.3e-07 Score=90.61 Aligned_cols=194 Identities=12% Similarity=0.006 Sum_probs=124.4
Q ss_pred chHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHH
Q 015916 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFV 184 (398)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 184 (398)
.+++.+.+..++.|.|.+...+..+.+++...|+ ++.+.+++.++.+++|+.+.|.+...++....
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~------------- 74 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGA------------- 74 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCC-------------
Confidence 3577777888999999999999999999999874 68999999999999999999999887653100
Q ss_pred HHHhhhhcccccCCCCCCch--hhhhhhhHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhccccc
Q 015916 185 VCLGAIFFLRETTPASTVDE--EKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSF 262 (398)
Q Consensus 185 i~~~~~~~l~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~ 262 (398)
.+ ....+.+ .....|+..+...+.+. + ++..... .
T Consensus 75 ---------~~--~~~~~~~~~~~~~~~~~~yl~ia~~~--------------------------~-~~~i~~~-~---- 111 (310)
T TIGR01272 75 ---------GD--LSMQVATANAEAAKVHTPYLLLAGAL--------------------------A-VLAIIFA-F---- 111 (310)
T ss_pred ---------cc--hhhhhhhhhHHHHHHHHHHHHHHHHH--------------------------H-HHHHHHH-H----
Confidence 00 0000000 01234544432221110 0 0000000 0
Q ss_pred cccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHH
Q 015916 263 IKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFL 342 (398)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~ 342 (398)
.+ .|+.++ + +.++ ++ ++ + +...++.+|+|.+|+..+.++
T Consensus 112 ~~-----~p~~~~---~--~~~~-------------------~~-------~~--~---~~~~~~~~~~~~~~l~~~~~f 150 (310)
T TIGR01272 112 LP-----LPELQE---A--DVAR-------------------VS-------SG--D---TTQKTSAFQFTHLVLGALGIF 150 (310)
T ss_pred cc-----CCCCCc---c--cccc-------------------cc-------cc--c---ccchhhHHhhHHHHHHHHHHH
Confidence 00 110000 0 0000 00 00 0 011235788999999999999
Q ss_pred hcccceeeeeechHHHHHHh---CCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 343 CGVGTGLAVMNNMGQIGLAL---GYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 343 ~~~~~g~~~~~n~~~i~~~~---g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
+..+....+.+.++.++.+. |.+ +.+...+.+..+..+||++.+++.||+++|+
T Consensus 151 ~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~ 209 (310)
T TIGR01272 151 VYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR 209 (310)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 99888888888899888753 665 3677899999999999999999999998765
No 146
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.75 E-value=8.9e-08 Score=97.34 Aligned_cols=157 Identities=15% Similarity=-0.024 Sum_probs=92.4
Q ss_pred ccHHH-HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchH-------HHHHHHHHHHHHHHHHHHHHhcccCC
Q 015916 35 NYSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPI-------ILLIGSLEGLVGYGAQWLVVSRKIQP 105 (398)
Q Consensus 35 ~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~-------~~~~g~~~~~ig~~~~~~~~~~~~~~ 105 (398)
.+.|. +.+++|++..+.+.+.....++... .++.|++.||+|+|+ ...+..++.++..++....
T Consensus 273 ~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~------- 345 (476)
T PLN00028 273 NIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRA------- 345 (476)
T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhccc-------
Confidence 34555 4677899999988876666666654 789999999998762 2222222222222222111
Q ss_pred chHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHH
Q 015916 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVV 185 (398)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i 185 (398)
.+.+...+..++.+++.+...........+..|++||.+.|+...+..+|+.+.+.+.. .-....+...+++..+..++
T Consensus 346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i 424 (476)
T PLN00028 346 NSLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIA 424 (476)
T ss_pred chHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHH
Confidence 23333333333444443333333333444556788999999998888888888887654 11122355555555666677
Q ss_pred HHhhhhcccccCCC
Q 015916 186 CLGAIFFLRETTPA 199 (398)
Q Consensus 186 ~~~~~~~l~~~p~~ 199 (398)
+.++.+++|.+.+.
T Consensus 425 ~~~~~~~~~~~~~~ 438 (476)
T PLN00028 425 CTLPVAFIHFPQWG 438 (476)
T ss_pred HHHHHHheeccchh
Confidence 77777777755443
No 147
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.73 E-value=9.1e-09 Score=94.39 Aligned_cols=130 Identities=15% Similarity=0.112 Sum_probs=96.9
Q ss_pred HHhccccccc---ccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcc-cCchHHHHHHHHHHHHHHHHHHHHH
Q 015916 25 AISGNNYTFS---NYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDR-IPAPIILLIGSLEGLVGYGAQWLVV 99 (398)
Q Consensus 25 ~~~g~~~~~s---~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr-~G~r~~~~~g~~~~~ig~~~~~~~~ 99 (398)
+..|..++|- ....+++.+.+++.++..++.+...--.++ ..++|+++|| +|.|.-.++-+....+|.++++.
T Consensus 52 lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~-- 129 (459)
T KOG4686|consen 52 LGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAA-- 129 (459)
T ss_pred hcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHh--
Confidence 3456666663 334456677778887877766666555544 7899999997 88888777777777788887753
Q ss_pred hcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHH
Q 015916 100 SRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAI 158 (398)
Q Consensus 100 ~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i 158 (398)
+.+. +.+|.+..+|++.|+|.-..-++-.++...||. |+-+.+.|+..+.-.+|+.+
T Consensus 130 -Ggi~-~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gstv 187 (459)
T KOG4686|consen 130 -GGIS-HAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTV 187 (459)
T ss_pred -chHH-HHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhcee
Confidence 2222 578999999999999886555677888899998 56899999998888888764
No 148
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.73 E-value=1.6e-07 Score=92.26 Aligned_cols=128 Identities=15% Similarity=0.082 Sum_probs=89.4
Q ss_pred cHHH-HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Q 015916 36 YSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (398)
Q Consensus 36 ~~~~-l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~ 113 (398)
+.|. +++++|++..+.+++.....++... .++.|++.||+|+|+.+.++.+...+........ . .+.+.+.+
T Consensus 260 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~ 333 (405)
T TIGR00891 260 LLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAI--G----ANVAVLGL 333 (405)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHh--C----CchHHHHH
Confidence 3444 5678999999999876666666654 7899999999999999988876654333222111 1 23444444
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCC
Q 015916 114 FLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 169 (398)
..++.+...+.........+.+.+|+ +||++.|+......+|+.+.+++.+.+.+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 334 GLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred HHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43444433333334455677899985 699999999999999999999999888764
No 149
>PRK15075 citrate-proton symporter; Provisional
Probab=98.73 E-value=4.4e-07 Score=91.04 Aligned_cols=135 Identities=16% Similarity=0.130 Sum_probs=84.1
Q ss_pred ccccccHHHH-HHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHH-HHHHHHHHHhcccCCch
Q 015916 31 YTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLV-GYGAQWLVVSRKIQPLS 107 (398)
Q Consensus 31 ~~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~i-g~~~~~~~~~~~~~~~~ 107 (398)
+....+.|.+ ++.+|++..+.+++.....++... .++.|++.||+|+|++..++..+..+ ++......... .+
T Consensus 255 ~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~----~~ 330 (434)
T PRK15075 255 YLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA----PS 330 (434)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC----Cc
Confidence 3445567775 556899998888776666666654 78999999999999998877555433 22111111111 22
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHh-hhhhhHHHHHHHHHhHcCC
Q 015916 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKG-YVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~-~~glg~~i~~~l~~~~~~~ 169 (398)
+..+.+..++.+++.+...........+.+|+ +||.+.|+... +..+++.+.|.+...+.+.
T Consensus 331 ~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~ 394 (434)
T PRK15075 331 FARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV 394 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 32332333334444444434445667899985 59999998644 3445577788888776654
No 150
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.72 E-value=1.9e-07 Score=90.28 Aligned_cols=128 Identities=12% Similarity=-0.035 Sum_probs=100.0
Q ss_pred ccHHHHHH-HcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHH
Q 015916 35 NYSDALKT-LMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (398)
Q Consensus 35 ~~~~~l~~-~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~ 112 (398)
.+.|.+.+ .+|++..+.+.+.....++... .++.|++.||+|+|+.+..+.++.+++.+...+. . ++.+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~ 305 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLT--P----PNFPLFL 305 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh--c----hhHHHHH
Confidence 34566544 4899999999876666666654 7889999999999999998877777777666543 1 1356666
Q ss_pred HHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 113 VFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
+..++.|++.+..+......+.+.+|+ +||++.|+......+++.+.+.+.+.+.+
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677888888887777777888999985 69999999999999999999888877654
No 151
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.72 E-value=2.5e-07 Score=93.28 Aligned_cols=165 Identities=10% Similarity=-0.022 Sum_probs=95.4
Q ss_pred cccccccHHHH-HHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhccc--CchHHH-HHHHHHHHHHHHHHHHHHhcccC
Q 015916 30 NYTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRI--PAPIIL-LIGSLEGLVGYGAQWLVVSRKIQ 104 (398)
Q Consensus 30 ~~~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~--G~r~~~-~~g~~~~~ig~~~~~~~~~~~~~ 104 (398)
.|....+.|.+ +++.|++..+.+.......++... .++.|++.||+ |+|+.. .....+..++.+.+... . .
T Consensus 269 ~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~--~-~- 344 (452)
T PRK11273 269 RYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLN--P-A- 344 (452)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHh--c-c-
Confidence 34555677775 566899998888866665566654 78999999999 555432 22223333333332221 0 1
Q ss_pred CchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHH-HHHHHHhHcCCChhHHHHHHHHHH
Q 015916 105 PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAI-FTDLCSALFADDPAKFLFMLAIVP 182 (398)
Q Consensus 105 ~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i-~~~l~~~~~~~~~~~~~~~~~~~~ 182 (398)
.+.+...+..+..|.+.............+.+|+ +||+++|+......+|+++ .+.+.+.+.+..+++..+.+....
T Consensus 345 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~ 423 (452)
T PRK11273 345 -GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGG 423 (452)
T ss_pred -cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHH
Confidence 1222222222333332211111222345688885 6999999998877787766 467777776654455555555555
Q ss_pred HHHHHhhhhcccccCCC
Q 015916 183 FVVCLGAIFFLRETTPA 199 (398)
Q Consensus 183 ~~i~~~~~~~l~~~p~~ 199 (398)
.+++++....+...|..
T Consensus 424 ~~~~~~~~~~~~~~~~~ 440 (452)
T PRK11273 424 SILAVILLIVVMIGEKR 440 (452)
T ss_pred HHHHHHHHHHHhccccc
Confidence 66666666666555543
No 152
>PRK09848 glucuronide transporter; Provisional
Probab=98.72 E-value=2.8e-07 Score=92.80 Aligned_cols=119 Identities=9% Similarity=-0.029 Sum_probs=68.7
Q ss_pred HHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhccc----CchHHH-HHHHHHHHHHHHHHHHHHhcccCCchHHH
Q 015916 37 SDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRI----PAPIIL-LIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (398)
Q Consensus 37 ~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~----G~r~~~-~~g~~~~~ig~~~~~~~~~~~~~~~~~~~ 110 (398)
...+++.+|++..+++.+.....+... ..|+.|+++||. |||+.. .++.+...+..+++.....+.......+.
T Consensus 32 ~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (448)
T PRK09848 32 LSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVY 111 (448)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHH
Confidence 345788899999999997666666665 589999999996 667654 56666555544443221111111112222
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHhh--ccCCcchHHHHHhhhhhh
Q 015916 111 MCVFLCMGGNSTTWMNTAVLVTCIRNF--RRNRGPVSGILKGYVGLS 155 (398)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~F--p~~RG~a~gi~~~~~glg 155 (398)
+++...+.+++.++..++......+.- |++|....++-..+..++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~ 158 (448)
T PRK09848 112 AYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLT 158 (448)
T ss_pred HHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHH
Confidence 333345556666665554444434333 346877766655443443
No 153
>TIGR00895 2A0115 benzoate transport.
Probab=98.71 E-value=1.8e-07 Score=91.49 Aligned_cols=129 Identities=16% Similarity=0.081 Sum_probs=93.0
Q ss_pred ccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
+....+.|.+.+++|++..+.+.+.....++... .++.|++.||+|+|+.+... .+..+...+.... . .+.+
T Consensus 267 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~-~-----~~~~ 339 (398)
T TIGR00895 267 YFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLL-LLGAVFAVLVGST-L-----FSPT 339 (398)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH-HHHHHHHHHHHHH-h-----hCHH
Confidence 3444566778888999999888866666666654 78999999999999554443 3333333332221 1 2344
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhH
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSAL 166 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~ 166 (398)
..++..++.|++.+..+......+.+.+|+ +||++.|+..+...+|+++.+.+.+.+
T Consensus 340 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 340 LLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 555666777888877777778889999985 699999999999999999988887653
No 154
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.71 E-value=2.4e-07 Score=94.63 Aligned_cols=133 Identities=14% Similarity=0.133 Sum_probs=103.3
Q ss_pred cccccHHH-HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 32 TFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 32 ~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
.+..+.|. +++.+|+|..+.+.......++... +++.|++.||+|+|+.+..|.++..++++.+... ... .+.+
T Consensus 277 ~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~--~~~--~~~~ 352 (495)
T PRK14995 277 GFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMT--DFS--TQQW 352 (495)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHh--cCC--CchH
Confidence 33344454 5777999999999976666676654 7999999999999999999998888888766543 111 2445
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
...+..++.|+|.|....+....+.+..|+ ++|.+.++......+|+.+.+.+.+.++.
T Consensus 353 ~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 353 QAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555677888999988777777778888885 69999999999999999999888887654
No 155
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.70 E-value=2.9e-07 Score=89.54 Aligned_cols=152 Identities=13% Similarity=0.038 Sum_probs=91.7
Q ss_pred cccccHHH-HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHH-HHHHHHHHHHHHHHHH-HhcccCCch
Q 015916 32 TFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILL-IGSLEGLVGYGAQWLV-VSRKIQPLS 107 (398)
Q Consensus 32 ~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~-~g~~~~~ig~~~~~~~-~~~~~~~~~ 107 (398)
.+..+.|. +++++|.+..+.+++.....++... .++.|++.||+|+|+... .......++.+..... ..... ..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 311 (399)
T TIGR00893 233 FFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNY-VNI 311 (399)
T ss_pred HHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcc-chh
Confidence 33445555 4677899999988866666666654 789999999999996111 1111111111111110 00000 012
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCCh-hHHHHHHHHHHHHH
Q 015916 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDP-AKFLFMLAIVPFVV 185 (398)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~i 185 (398)
.+.......+.+.+.+ ..........+.+|+ +||++.|+......+|+.+.+.+.+.+.+... +...+.+.....++
T Consensus 312 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~ 390 (399)
T TIGR00893 312 PYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALI 390 (399)
T ss_pred HHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHH
Confidence 3333333334444444 456677788899985 69999999999999999999999988887643 55444444433333
No 156
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.70 E-value=6.7e-07 Score=88.22 Aligned_cols=144 Identities=10% Similarity=-0.098 Sum_probs=91.8
Q ss_pred HHHHHHHcCCChhhHHHHHHHHH-hhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHH
Q 015916 37 SDALKTLMNLTQLELNNLSVVKD-IGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVF 114 (398)
Q Consensus 37 ~~~l~~~~g~s~~~~~~i~~~~~-~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~ 114 (398)
.+++.++.|++.++++++..... +.... .++.|++.||+|+|+++.++.++..+..+.. +.........+.+.++..
T Consensus 231 ~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 231 SKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLW-FAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred hhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHHHcccCCcHHHHHHH
Confidence 34444568999999998644443 45555 5799999999999999988877664433322 211111000122333333
Q ss_pred HHHHhhhhhhhhhHHHHHHHHhhc--cCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHH
Q 015916 115 LCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIV 181 (398)
Q Consensus 115 ~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~ 181 (398)
..+.+++.+....+......+..+ ++||+..++.++..++|..+.+.+.+.+.+..+++..+..+..
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~ 378 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTV 378 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 444455556555555566667765 4589999999999999999999998888764344444444433
No 157
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.70 E-value=7e-07 Score=87.94 Aligned_cols=150 Identities=9% Similarity=0.052 Sum_probs=93.2
Q ss_pred HHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHH
Q 015916 38 DALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLC 116 (398)
Q Consensus 38 ~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~ 116 (398)
|.+++.+|++..+.+++.....++... .++.|++.||+|+|+.+.++..+..+++++.... . ++.+...+..+
T Consensus 224 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~-~-----~~~~~~~~~~~ 297 (382)
T PRK10091 224 PYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFF-G-----GMKTASLIFAF 297 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHH-H-----hhHHHHHHHHH
Confidence 445667899999999876666666654 7999999999999999999988888887655432 1 12333333344
Q ss_pred HHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCC-ChhHHHHHHHHHHHHHHHhhhhcc
Q 015916 117 MGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVCLGAIFFL 193 (398)
Q Consensus 117 l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~l 193 (398)
+.+.|......+......+..+++|..+.+.......+|.++.+.+.+.+++. ..++..+....+..++.+.+....
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 298 ICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 44444433333333333344433333333344566789999999999888874 345555555544444444444433
No 158
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.66 E-value=2.7e-07 Score=93.42 Aligned_cols=131 Identities=12% Similarity=0.119 Sum_probs=101.5
Q ss_pred ccHHHH-HHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHH
Q 015916 35 NYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (398)
Q Consensus 35 ~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~ 112 (398)
.+.|.+ ++.+|++..+.+++.....++... .++.|++.||+|+|+.+.++..+.+++...+.+.... +.+.+.+.
T Consensus 276 ~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~ 352 (485)
T TIGR00711 276 YLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTP---DTPFLAIA 352 (485)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCC---CCCHHHHH
Confidence 345554 566899999999876666666654 7999999999999999999998888888776532111 13455555
Q ss_pred HHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 113 VFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
...++.|+|.+..+.+......+.+| ++||.+.|+......+|+.+.+.+.+.+++
T Consensus 353 ~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 353 LPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778888888776666666778888 469999999999999999999998888764
No 159
>PRK11043 putative transporter; Provisional
Probab=98.66 E-value=1.8e-06 Score=85.39 Aligned_cols=137 Identities=15% Similarity=0.096 Sum_probs=93.5
Q ss_pred ccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
+.+..+.|.+.+++|++..+.++......++... +...+++.||+|+|+....+.+...++.+.+........ .+.+
T Consensus 220 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 297 (401)
T PRK11043 220 FAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSH--PSLV 297 (401)
T ss_pred HHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhcc--CcHH
Confidence 3444456777777899999988855555555544 678899999999999877766666555444332211111 2334
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCC
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 169 (398)
.+.+...+.|.+.+..+........+.+|++||++.|+..+....++...+.+.+.+.+.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 298 PLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 444445566777777766666666677888999999999988777888888888877664
No 160
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.65 E-value=1.9e-06 Score=84.18 Aligned_cols=147 Identities=10% Similarity=0.080 Sum_probs=86.5
Q ss_pred HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHH-HHHHhcccCCchHHHHHHHHHH
Q 015916 40 LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQ-WLVVSRKIQPLSYWQMCVFLCM 117 (398)
Q Consensus 40 l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~-~~~~~~~~~~~~~~~l~~~~~l 117 (398)
+.+++|++..+.+++.....++... .++.|++.||+|+|+++.++..+..+..+.. .....+ .+++...+...+
T Consensus 221 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 296 (377)
T PRK11102 221 YIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLD----LGFWALVVGVAA 296 (377)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHH
Confidence 5677899999999866666666654 7899999999999999998887654432222 211111 234443333333
Q ss_pred HhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhh-hhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhc
Q 015916 118 GGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGY-VGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFF 192 (398)
Q Consensus 118 ~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~-~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 192 (398)
.+.+.+.........+.+..|++||.+.++.... +++|+.+.+.+. .....+.+.+....++ ..+.+++..++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 370 (377)
T PRK11102 297 FVGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLS-LAPFTSAWPMVWSMAF-CSILSILFYLY 370 (377)
T ss_pred HHHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHH-hccCCChHHHHHHHHH-HHHHHHHHHHH
Confidence 3333444444445556677788899999997654 556666655543 3333333444343333 33333333333
No 161
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.65 E-value=1.4e-06 Score=86.31 Aligned_cols=134 Identities=10% Similarity=-0.056 Sum_probs=94.0
Q ss_pred HHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHH-HHHHHHHHHHhcccCCchHHHHHHH
Q 015916 37 SDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGL-VGYGAQWLVVSRKIQPLSYWQMCVF 114 (398)
Q Consensus 37 ~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~-ig~~~~~~~~~~~~~~~~~~~l~~~ 114 (398)
.|.+.+++|++..+.+.+.....++... .++.|++.||.+ |+....+..+.. .+.++.... .+.+.+.+.
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~-------~~~~~~~~~ 311 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWG-------SDKIVATGV 311 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHH
Confidence 3657778899999888866666666655 689999999965 444444444433 333333221 245666667
Q ss_pred HHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHH
Q 015916 115 LCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFML 178 (398)
Q Consensus 115 ~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~ 178 (398)
.++.|++.+..+....+.+.+..|++++++.++..+...+|..+.+.+.+.+++..+....+..
T Consensus 312 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~ 375 (394)
T PRK10213 312 AIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLML 375 (394)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHH
Confidence 7778888887776667678888888888888888888899999999999998875444333333
No 162
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.65 E-value=1.4e-06 Score=87.48 Aligned_cols=169 Identities=17% Similarity=0.099 Sum_probs=107.5
Q ss_pred HhcccccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccC
Q 015916 26 ISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQ 104 (398)
Q Consensus 26 ~~g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~ 104 (398)
..|. +....|...+-++.|++..+..+......+... ..+.+.++.||+|||++++++..++.+..+++.....-...
T Consensus 283 ~sGi-~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~ 361 (485)
T KOG0569|consen 283 FSGI-NAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNS 361 (485)
T ss_pred hcCc-ceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444 344456677888899999988887666666554 47999999999999999999999998877776543221110
Q ss_pred C-chHHHHH---HHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHH
Q 015916 105 P-LSYWQMC---VFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLA 179 (398)
Q Consensus 105 ~-~~~~~l~---~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~ 179 (398)
. ...+.++ ++..+..++.|.. +.+.-..+|.||+ .|..|.++......++.++....+..+.+.-+. +.+++-
T Consensus 362 ~~~~~~y~~i~~~~~~~~~f~~G~g-pi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF 439 (485)
T KOG0569|consen 362 FGSWLSYLCIAAIFLFIISFAIGPG-PIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILF 439 (485)
T ss_pred hhhHHHHHHHHHHHHHHHhhhcCCC-chhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHH
Confidence 0 0111122 2334444555544 4566789999996 599999999999888888776665555443222 333333
Q ss_pred HHHHHH-HHhhhhcccccC
Q 015916 180 IVPFVV-CLGAIFFLRETT 197 (398)
Q Consensus 180 ~~~~~i-~~~~~~~l~~~p 197 (398)
+++.++ .+.....+||..
T Consensus 440 ~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 440 VIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHHHHHHHHHhCcccC
Confidence 333333 333333444444
No 163
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.62 E-value=5.7e-06 Score=82.13 Aligned_cols=59 Identities=15% Similarity=0.073 Sum_probs=42.0
Q ss_pred HHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCc-hHHHHHHHHHHHHHHHHH
Q 015916 37 SDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPA-PIILLIGSLEGLVGYGAQ 95 (398)
Q Consensus 37 ~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~-r~~~~~g~~~~~ig~~~~ 95 (398)
.+.+-++.|+|..|++.+.+...+...+ .++.|.+.||+++ |+.+.+..++.++..+..
T Consensus 25 ~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 25 LPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3445567899999999987777777765 6899999999864 556656555555544333
No 164
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.61 E-value=7.4e-07 Score=87.72 Aligned_cols=123 Identities=17% Similarity=0.059 Sum_probs=64.9
Q ss_pred HHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHH--HHHHHHHH-HHHhcccCCchHHHHHHH
Q 015916 39 ALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEG--LVGYGAQW-LVVSRKIQPLSYWQMCVF 114 (398)
Q Consensus 39 ~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~--~ig~~~~~-~~~~~~~~~~~~~~l~~~ 114 (398)
-++++.|+|.+|++.+.++..+..+ .+|+.|.+.||+|.||-++...... ..+-+..+ +...- ..+. .+.
T Consensus 33 WL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll---~~n~---~lg 106 (412)
T PF01306_consen 33 WLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLL---QSNF---WLG 106 (412)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHH---HTT----HHH
T ss_pred HHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH---HHH
Confidence 3567799999999997777777765 4899999999999777654433222 22333222 11000 0122 223
Q ss_pred HHHHhhhhhhhhhHHHHHHH---HhhccCCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 115 LCMGGNSTTWMNTAVLVTCI---RNFRRNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 115 ~~l~G~g~g~~~~~~~~~~~---~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
.++.|+..++.+.+...... +-..++.+.=-|=.-+..++|-++.+.+.+.++
T Consensus 107 ~iig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~ 162 (412)
T PF01306_consen 107 AIIGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILF 162 (412)
T ss_dssp HHHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheee
Confidence 33344444444433333332 222333455555555555666666666666654
No 165
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.61 E-value=1.6e-06 Score=88.91 Aligned_cols=149 Identities=14% Similarity=0.073 Sum_probs=111.7
Q ss_pred HHHH-HHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHH
Q 015916 37 SDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVF 114 (398)
Q Consensus 37 ~~~l-~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~ 114 (398)
.|.+ ++++|.+....+++..+..+|+++ ++..+++.+|+++++++..+.+.++++.+.+++. ++.+..++.
T Consensus 241 lPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~-------~~~~~~~~~ 313 (524)
T PF05977_consen 241 LPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS-------PSFWLALIA 313 (524)
T ss_pred hhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc-------hHHHHHHHH
Confidence 4554 678999999999988888899976 6899999999999999999998888888877664 466777777
Q ss_pred HHHHhhhhhhhhhHHHHHHHHhhccC-CcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhc
Q 015916 115 LCMGGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFF 192 (398)
Q Consensus 115 ~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 192 (398)
.++.|.+.....+...+.+++.-|++ ||+++++..+....+..+.+.+.+.+.+..+.+..+.++.+..++..+....
T Consensus 314 l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 314 LFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 77888887777667777788888964 9999999988777777777777776665433344444444444444444433
No 166
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.58 E-value=1.1e-06 Score=88.19 Aligned_cols=147 Identities=14% Similarity=0.163 Sum_probs=83.9
Q ss_pred cccccHHHH-HHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhccc--CchHHH-HHHHHHHHHHHHHHHHHHhcccCCc
Q 015916 32 TFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRI--PAPIIL-LIGSLEGLVGYGAQWLVVSRKIQPL 106 (398)
Q Consensus 32 ~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~--G~r~~~-~~g~~~~~ig~~~~~~~~~~~~~~~ 106 (398)
....+.|.+ ++++|++..+.+.......++..+ .++.|++.||+ ++|+.. ....+...+........ . . .
T Consensus 261 ~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~--~-~--~ 335 (434)
T PRK11663 261 AINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLM--P-F--A 335 (434)
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHc--c-c--c
Confidence 334456665 477899999988866666666655 78999999998 333322 22211112122111111 1 0 1
Q ss_pred hHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHH
Q 015916 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPF 183 (398)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 183 (398)
+.+...+..+..|++.............+.+|+ +||+++|+......+|+++.|++.+.+.+...+...+.......
T Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~ 413 (434)
T PRK11663 336 SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAA 413 (434)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHH
Confidence 222222222233332211111122345788874 79999999999999999999999998887544544443333333
No 167
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.57 E-value=1.2e-06 Score=86.57 Aligned_cols=140 Identities=12% Similarity=0.115 Sum_probs=93.7
Q ss_pred CCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhh
Q 015916 45 NLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTT 123 (398)
Q Consensus 45 g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g 123 (398)
+.+..+.+.+.....+... ..+..|++.||+|+|+.+.++.++.++++.+.... ++.+.+++..++.|++.+
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~-------~~~~~~~~~~~l~g~~~~ 322 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA-------TTALEVVILKMLHAFEVP 322 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc-------CChHHHHHHHHHHHHHHH
Confidence 4555566665444444443 46889999999999999999999888877765542 356666667778887766
Q ss_pred hhhhHHHHHHHHhhccC-CcchHHH-HHhhhhhhHHHHHHHHHhHcCCCh-hHHHHHHHHHHHHHHHhhhh
Q 015916 124 WMNTAVLVTCIRNFRRN-RGPVSGI-LKGYVGLSTAIFTDLCSALFADDP-AKFLFMLAIVPFVVCLGAIF 191 (398)
Q Consensus 124 ~~~~~~~~~~~~~Fp~~-RG~a~gi-~~~~~glg~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 191 (398)
...........+.+|++ |+++.+. .+....+|+.+.+.+.+.+.+..+ ...++..+++..+.+++..+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 323 FLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 55444555566666654 6666655 456778999999999888887533 34444455555555554443
No 168
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.57 E-value=1.4e-06 Score=83.42 Aligned_cols=118 Identities=16% Similarity=0.104 Sum_probs=89.1
Q ss_pred HcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhh
Q 015916 43 LMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNS 121 (398)
Q Consensus 43 ~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g 121 (398)
++|++.++.+...+....+... .+..+++.||+|+|+.+.++..+..++.++.... ++.+.+ ....+.|++
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~-------~~~~~~-~~~~l~g~~ 243 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALT-------HGYVAM-WFVLALGLF 243 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-------CCHHHH-HHHHHHHHH
Confidence 3799999988876666666655 6899999999999999998888887776554432 112222 233467888
Q ss_pred hhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCC
Q 015916 122 TTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 122 ~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 169 (398)
.+..++.......+.+|++.+.+.++.. ...+|+++.|++.+.+.+.
T Consensus 244 ~s~i~P~~~s~a~~~~~~~~~~asai~~-~~~~Gg~i~P~l~G~lad~ 290 (310)
T TIGR01272 244 NSIMFPTIFSLALNALGRHTSQGSGILC-LAIVGGAIVPLLQGSLADC 290 (310)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHH-HHHhcchHHHHHHHHHHHh
Confidence 8888888788888999988888888864 4568999999998887764
No 169
>PRK11462 putative transporter; Provisional
Probab=98.56 E-value=3.9e-06 Score=84.98 Aligned_cols=123 Identities=10% Similarity=-0.116 Sum_probs=79.7
Q ss_pred HHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcc----cCchHHHH-HHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Q 015916 40 LKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDR----IPAPIILL-IGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (398)
Q Consensus 40 l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr----~G~r~~~~-~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~ 113 (398)
+.+.+|++...++++....-+-- ..-|+.|.++|| +|||+..+ +|.+.+++++++++... +.........+++
T Consensus 36 yt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p-~~s~~~~~~y~~~ 114 (460)
T PRK11462 36 YTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTP-DLSMNGKMIYAAI 114 (460)
T ss_pred HHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCC-CCCcchHHHHHHH
Confidence 56789999999998655544444 457999999996 78876555 56678888777665421 1011111233333
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHhhc--cCCcchHHHHHhhhhhhHHHHHHHH
Q 015916 114 FLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDLC 163 (398)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~~l~ 163 (398)
..++...+..+...+-.+...+.-+ ++|.+..++-..+..+|+.+.+.+.
T Consensus 115 ~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~ 166 (460)
T PRK11462 115 TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLM 166 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556666666666666666665 5699999998887777766655543
No 170
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.54 E-value=2.6e-06 Score=86.32 Aligned_cols=158 Identities=16% Similarity=0.135 Sum_probs=109.7
Q ss_pred HHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCch--HHHHHHHHHHHHHHHHHHH-HHhcccCCchHHHHH
Q 015916 37 SDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAP--IILLIGSLEGLVGYGAQWL-VVSRKIQPLSYWQMC 112 (398)
Q Consensus 37 ~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r--~~~~~g~~~~~ig~~~~~~-~~~~~~~~~~~~~l~ 112 (398)
....++++|++..|+..+.....+.+.. +.+.|++.||+|+| +++.++.++..+-.+.-.+ ........++.+.++
T Consensus 305 ~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~ 384 (477)
T PF11700_consen 305 GIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFW 384 (477)
T ss_pred HHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHH
Confidence 3335679999999988877777776654 78999999999999 8888877766432222111 001111114567888
Q ss_pred HHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCC-ChhHHHHHHHHHHHHHHHhhh
Q 015916 113 VFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVCLGAI 190 (398)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~~~ 190 (398)
++.++.|+..|..+..+-++.++.-|+ +.+.-.|+.....-.++.+.|.+.+.+.+. +..++-+..-.+..+++++..
T Consensus 385 ~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll 464 (477)
T PF11700_consen 385 VLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILL 464 (477)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999996 689999999887777777777777776653 223444443344444555555
Q ss_pred hccc
Q 015916 191 FFLR 194 (398)
Q Consensus 191 ~~l~ 194 (398)
+.++
T Consensus 465 ~~v~ 468 (477)
T PF11700_consen 465 FFVD 468 (477)
T ss_pred hhcc
Confidence 5543
No 171
>PRK10054 putative transporter; Provisional
Probab=98.53 E-value=3.3e-06 Score=83.70 Aligned_cols=150 Identities=9% Similarity=-0.030 Sum_probs=96.9
Q ss_pred HcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhh
Q 015916 43 LMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNS 121 (398)
Q Consensus 43 ~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g 121 (398)
+.+.+....+++.....+... ..++.|++.||+++|+.+.++.++..+++....+. . ++.+.+.+..++.|+|
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~g 311 (395)
T PRK10054 238 DSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFS-G-----NSLLLWGMSAAVFTVG 311 (395)
T ss_pred ccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHc-c-----hHHHHHHHHHHHHHHH
Confidence 445566666654444433333 36888999999999999999988888888766542 1 2455555666777777
Q ss_pred hhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChh-HHHHHHHHHHHHHHHhhhhcccccCCC
Q 015916 122 TTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPA-KFLFMLAIVPFVVCLGAIFFLRETTPA 199 (398)
Q Consensus 122 ~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~l~~~p~~ 199 (398)
.+...+.....+.+.-|+ +||++.|... ...+|.++.+.+.+.+.+.... ..+..++...++..++...-.+++|+.
T Consensus 312 ~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (395)
T PRK10054 312 EIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRARPWG 390 (395)
T ss_pred HHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhccccCccc
Confidence 765444444556666675 6899988765 4458888999888888875433 334444444444444444445555543
No 172
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.52 E-value=4.1e-06 Score=83.06 Aligned_cols=147 Identities=14% Similarity=0.149 Sum_probs=92.3
Q ss_pred HHHHHHcCCChhhHHHHHH-HHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHH-
Q 015916 38 DALKTLMNLTQLELNNLSV-VKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVF- 114 (398)
Q Consensus 38 ~~l~~~~g~s~~~~~~i~~-~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~- 114 (398)
+.+.+++|++..+.+++.. ...++... .++.|++.||+|+|+.+.++.+...+..+........ + ++.+.+.+.
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~--~-~~~~~~~~~~ 310 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVT--P-KHLWTMALAI 310 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc--C-CcHHHHHHHH
Confidence 4467779999999998643 33344444 6899999999999998887777766554433221111 0 233443332
Q ss_pred ---HHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhh
Q 015916 115 ---LCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAI 190 (398)
Q Consensus 115 ---~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 190 (398)
.+..|++.+..+......+.+.+|.+ ..++..+..++|..+.+++.+.+.+..+++.++.++....++.++..
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 311 GIENLCGGMGTAAFVALLMALCNRSFSAT---QYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 24555666665666666677777643 34555555677877777777777776566666666665555554444
No 173
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.50 E-value=1.7e-05 Score=80.44 Aligned_cols=73 Identities=14% Similarity=0.221 Sum_probs=55.2
Q ss_pred chHHHHhccHhHHHHHHHHHhcccceeeeeechHHHHH-HhCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhH
Q 015916 323 HTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGL-ALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKM 395 (398)
Q Consensus 323 ~t~~~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~-~~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~ 395 (398)
.+.+++.|.|+...+.++.++..-...+++.....+.+ .+|+++ ......+..+.+++|.+++|++.||++.|
T Consensus 272 ~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k 347 (477)
T PF11700_consen 272 RTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPK 347 (477)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 46788888888888888777665444445555555555 578875 34566778899999999999999999998
No 174
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.48 E-value=8.1e-06 Score=80.53 Aligned_cols=127 Identities=13% Similarity=0.155 Sum_probs=86.2
Q ss_pred HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Q 015916 40 LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (398)
Q Consensus 40 l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (398)
+++.+|++..+.+++.....++.+. +++.+++.||+|++... +.....++.+......... ..+.+.+.+..++.
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 309 (394)
T PRK11652 234 MGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVICCLLAGLLMWIPGWFG--VMNVWTLLVPAALF 309 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhc--cccHHHHHHHHHHH
Confidence 4566899999988876666666655 68899999999833322 2222222222221110000 02345556667778
Q ss_pred hhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCC
Q 015916 119 GNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADD 170 (398)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~ 170 (398)
|.|.+..++.......+.+|+++|.+.++..+...+|+.+.+.+...+....
T Consensus 310 ~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 361 (394)
T PRK11652 310 FFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQTG 361 (394)
T ss_pred HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 8888877777777788889999999999999999999999998877765443
No 175
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.48 E-value=2.6e-06 Score=95.68 Aligned_cols=121 Identities=17% Similarity=0.100 Sum_probs=94.0
Q ss_pred HHHHHcCCChh-hHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHH
Q 015916 39 ALKTLMNLTQL-ELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLC 116 (398)
Q Consensus 39 ~l~~~~g~s~~-~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~ 116 (398)
.+++.+|++.. +.+++.+...++.++ +++.|++.||+++|+++.++.++.+++.+++.+. .+.+.+++..+
T Consensus 258 ~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 330 (1146)
T PRK08633 258 YAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA-------PSLASVLVLFF 330 (1146)
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh-------hhHHHHHHHHH
Confidence 35778999998 888877777777765 7899999999999999999888888777766543 34556666677
Q ss_pred HHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhH
Q 015916 117 MGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSAL 166 (398)
Q Consensus 117 l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~ 166 (398)
+.|++.+....+....+.+.+|+ +||++.|+......+|+.+.+.+...+
T Consensus 331 ~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l 381 (1146)
T PRK08633 331 LFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLF 381 (1146)
T ss_pred HHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 78888887766777778888885 699999999988888876665554433
No 176
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.48 E-value=2.9e-06 Score=82.54 Aligned_cols=150 Identities=13% Similarity=0.078 Sum_probs=106.9
Q ss_pred HHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Q 015916 40 LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (398)
Q Consensus 40 l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (398)
-+.++||++.|+..+.....+.+. .++++|++.||+|.|+++.++.++..+..+...+. . .-..+.++.++.
T Consensus 279 g~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~-~------~~~~f~i~gll~ 351 (438)
T COG2270 279 GAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL-E------GELDFWILGLLV 351 (438)
T ss_pred HHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc-c------ccHHHHHHHHHH
Confidence 356999999999998777777775 47999999999999999999999888776665443 1 122345567788
Q ss_pred hhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCC-ChhHHHHHHHHHHHHHHHhhhhccccc
Q 015916 119 GNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVCLGAIFFLRET 196 (398)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~l~~~ 196 (398)
|...|-....+-.+.++..|+ |-|+..|+.+...-.++.+.|.+.+.+.+- +..+.-+..-++...++++..+.+|++
T Consensus 352 g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 352 GTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 888888888899999999996 569999999887666666666665554431 223333333333444555555555554
No 177
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.48 E-value=2.3e-06 Score=83.20 Aligned_cols=119 Identities=9% Similarity=0.040 Sum_probs=84.9
Q ss_pred ccHHHHHHHcCCChhhHHHHHH-HHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhccc----CCchH
Q 015916 35 NYSDALKTLMNLTQLELNNLSV-VKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKI----QPLSY 108 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~i~~-~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~----~~~~~ 108 (398)
.+.|++.+++|++.++.+.+.. ...+.... .+++|++.||+|+|+.+.++.++..+++....+...... ..++.
T Consensus 230 ~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (356)
T TIGR00901 230 VLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHL 309 (356)
T ss_pred HHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchH
Confidence 3455554559999999887544 34345544 689999999999999999999888877665543211100 00134
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhh
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVG 153 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~g 153 (398)
+.+....++.+++.+..+.+......+.+|+ +||+..|+..+..+
T Consensus 310 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 310 LMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 5555667777888888888888999999985 69999999877654
No 178
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.47 E-value=6.7e-06 Score=81.60 Aligned_cols=151 Identities=13% Similarity=0.098 Sum_probs=101.6
Q ss_pred HHHHcC-CChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHH----HH
Q 015916 40 LKTLMN-LTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM----CV 113 (398)
Q Consensus 40 l~~~~g-~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l----~~ 113 (398)
.-++.| .+....+...+...+.=+ +-...+++..|+|.|++++++.+..++=+.+.+... ++.+.. .+
T Consensus 233 yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~------~~~~~~~~~~~l 306 (400)
T PF03825_consen 233 YLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS------DPWPFIVALQLL 306 (400)
T ss_pred HHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc------CCcHHHHHHHHH
Confidence 344555 666666653333333323 356889999999999999999999888777766531 122221 22
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHhhccC-CcchHHHHHh-hhhhhHHHHHHHHHhHcCCCh------h-HHHHHHHHHHHH
Q 015916 114 FLCMGGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKG-YVGLSTAIFTDLCSALFADDP------A-KFLFMLAIVPFV 184 (398)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~-~~glg~~i~~~l~~~~~~~~~------~-~~~~~~~~~~~~ 184 (398)
...+.|+.-++.+.++..++.+..|++ |+++.|+..+ ..|+|+.+.+.+.+.+++... + ......+++..+
T Consensus 307 ~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~ 386 (400)
T PF03825_consen 307 GQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALV 386 (400)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHH
Confidence 345688888888889999999999964 9999999876 479999999999998887521 1 233333444444
Q ss_pred HHHhhhhccccc
Q 015916 185 VCLGAIFFLRET 196 (398)
Q Consensus 185 i~~~~~~~l~~~ 196 (398)
+.++..++.||+
T Consensus 387 ~~~~f~~~fk~~ 398 (400)
T PF03825_consen 387 ILVLFVILFKPK 398 (400)
T ss_pred HHHHHHhhccCC
Confidence 444444555544
No 179
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.46 E-value=2.8e-06 Score=85.87 Aligned_cols=159 Identities=14% Similarity=0.127 Sum_probs=91.9
Q ss_pred ccccccHHHH-HHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHH--------HHHHHHHHHHHHHHHHHHHh
Q 015916 31 YTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPII--------LLIGSLEGLVGYGAQWLVVS 100 (398)
Q Consensus 31 ~~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~--------~~~g~~~~~ig~~~~~~~~~ 100 (398)
+.+..+.|.+ ++.+|.+..+.++......++.. ..+++|++.||+++|+. +..+......+.........
T Consensus 278 ~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (465)
T TIGR00894 278 TILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYL 357 (465)
T ss_pred HHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4445567765 67789999999987666566665 47899999998765421 11111111111111111110
Q ss_pred cccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCC---hhHHHHH
Q 015916 101 RKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADD---PAKFLFM 177 (398)
Q Consensus 101 ~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~---~~~~~~~ 177 (398)
. .+.+...+...+.+.+.+...........+..|+.+|.+.|+......+|+.+.+.+.+.+.+.+ .|...+.
T Consensus 358 --~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~ 433 (465)
T TIGR00894 358 --S--AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFL 433 (465)
T ss_pred --C--CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHH
Confidence 0 12222223333333333333333334455667888999999999999999999999988877643 3555555
Q ss_pred HHHHHHHHHHhhhhcc
Q 015916 178 LAIVPFVVCLGAIFFL 193 (398)
Q Consensus 178 ~~~~~~~i~~~~~~~l 193 (398)
+..+..+++.+...++
T Consensus 434 ~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 434 IMAFVNILCVIFYLIF 449 (465)
T ss_pred HHHHHHHHHHHHeeee
Confidence 5555555555444444
No 180
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.46 E-value=1.2e-06 Score=86.93 Aligned_cols=154 Identities=12% Similarity=0.048 Sum_probs=116.7
Q ss_pred HHHHHHHcC----CChhhHHH-HHHHHHhhhhhhhhhhhhhcc-cCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHH
Q 015916 37 SDALKTLMN----LTQLELNN-LSVVKDIGKAFGLLAGLASDR-IPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (398)
Q Consensus 37 ~~~l~~~~g----~s~~~~~~-i~~~~~~~~~~~~~~G~l~Dr-~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~ 110 (398)
.-.+..+++ ++++++.- ++....+..+..+++||++|| .|+|+++.+|++++.+|+++++..- . .....
T Consensus 45 ~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~---~--~~~~g 119 (498)
T COG3104 45 ILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS---V--SGPGG 119 (498)
T ss_pred HHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc---c--ccccH
Confidence 334555555 99988766 455555555567899999999 7999999999999999999987631 0 12445
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHhhcc---CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHH
Q 015916 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFRR---NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCL 187 (398)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~---~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 187 (398)
+++...+.++|.|..=......+.+.+|+ ||-.+.++...+..+|+.+.+.+...+-+...|+..+-++.+-...++
T Consensus 120 l~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl 199 (498)
T COG3104 120 LYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGL 199 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 66666677789998766667778899973 478888888899999999998888887776677777777777777777
Q ss_pred hhhhcccc
Q 015916 188 GAIFFLRE 195 (398)
Q Consensus 188 ~~~~~l~~ 195 (398)
+..++.|+
T Consensus 200 ~~f~~~~r 207 (498)
T COG3104 200 VIFLLGRR 207 (498)
T ss_pred HHHHHccc
Confidence 77766653
No 181
>PRK10133 L-fucose transporter; Provisional
Probab=98.46 E-value=4.7e-06 Score=83.83 Aligned_cols=120 Identities=9% Similarity=-0.044 Sum_probs=91.1
Q ss_pred HHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHh
Q 015916 41 KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGG 119 (398)
Q Consensus 41 ~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G 119 (398)
++.+|++..+.++......+++.. .++.|++.||+|+|+++..+.++..++.++..+. .+.+. .....+.|
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~l~g 358 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA-------GGHVG-LIALTLCS 358 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc-------CChHH-HHHHHHHH
Confidence 567899999999976666677665 6899999999999999998877776665544332 12222 23455678
Q ss_pred hhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCC
Q 015916 120 NSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 120 ~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 169 (398)
++.+..++.......+.+|++.+.+.++... ..+|+++.+++.+.+.+.
T Consensus 359 lg~~~i~P~~~s~a~~~~~~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~ 407 (438)
T PRK10133 359 AFMSIQYPTIFSLGIKNLGQDTKYGSSFIVM-TIIGGGIVTPVMGFVSDA 407 (438)
T ss_pred HHHHHHHHHHHHHHHcccchhhccchhHHhH-HhccchHHHHHHHHHHHh
Confidence 8889888888888889999888899998875 447888888888877654
No 182
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.46 E-value=3.8e-06 Score=80.45 Aligned_cols=80 Identities=18% Similarity=0.152 Sum_probs=66.9
Q ss_pred HHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhh
Q 015916 42 TLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGN 120 (398)
Q Consensus 42 ~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 120 (398)
+++|++..|++.+...+..... ++++.|.+.||+|||+..++-+++..++++..- +++++.+++.|++.|+
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~--------~~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH--------SSNYPVLLLGRVLGGI 133 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh--------ccccHHHHHHHHHHHH
Confidence 6799999999997777777665 599999999999999999998888888876432 1568889999999999
Q ss_pred hhhhhhhHH
Q 015916 121 STTWMNTAV 129 (398)
Q Consensus 121 g~g~~~~~~ 129 (398)
++.+.+.+-
T Consensus 134 aTSLLfS~F 142 (354)
T PF05631_consen 134 ATSLLFSAF 142 (354)
T ss_pred HHHHHHHHH
Confidence 998876543
No 183
>TIGR00898 2A0119 cation transport protein.
Probab=98.46 E-value=2.4e-06 Score=87.26 Aligned_cols=126 Identities=17% Similarity=0.019 Sum_probs=83.0
Q ss_pred hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCc
Q 015916 64 FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRG 142 (398)
Q Consensus 64 ~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG 142 (398)
..++.+++.||+|||+++.++.++.+++.+++.+.. +...+...+..++.+.+.+..+.......++.+|. .|+
T Consensus 371 ~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 445 (505)
T TIGR00898 371 AKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVP-----VDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRN 445 (505)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcC-----CCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHh
Confidence 357889999999999999999988888877765531 11123333344455555555556666778899995 599
Q ss_pred chHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhccccc
Q 015916 143 PVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLRET 196 (398)
Q Consensus 143 ~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~ 196 (398)
.++|+..+...+|+.+.|.+.. +.+.+ ....+.+..+..++..+..+++||.
T Consensus 446 ~~~g~~~~~~~ig~~i~p~i~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~lpet 497 (505)
T TIGR00898 446 LGVGVCSTMARVGSIISPFLVY-LGEKW-LFLPLVLFGGLALLAGILTLFLPET 497 (505)
T ss_pred hhHhHHHHHHHHHHHHHhHHHH-HHHHH-HhhHHHHHHHHHHHHHHHHHcCcCC
Confidence 9999999999999999988877 33222 2222222233333344444556543
No 184
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.45 E-value=2.8e-06 Score=85.33 Aligned_cols=144 Identities=10% Similarity=-0.079 Sum_probs=78.8
Q ss_pred ccccccHHHH-HHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Q 015916 31 YTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 31 ~~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~ 108 (398)
|.+..+.|.+ ++..|++..+.++......++.. ..+..|++.||+|+++....+.....+............. .+.
T Consensus 268 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 345 (438)
T TIGR00712 268 YGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPA--GNP 345 (438)
T ss_pred HHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCC--Cch
Confidence 4444566665 55679999888886555555554 4789999999997554333343332222111111011111 122
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhH-HHHHHHHHhHcCCChhHHHH
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLST-AIFTDLCSALFADDPAKFLF 176 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~-~i~~~l~~~~~~~~~~~~~~ 176 (398)
+...+..+..|.+.............+.+|+ +||++.|+......+|+ ++.+.+.+.+.+...+...+
T Consensus 346 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~ 415 (438)
T TIGR00712 346 LVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGF 415 (438)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHH
Confidence 3332333333333211111112345688885 69999999987766665 56777777776653343333
No 185
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.44 E-value=3.3e-06 Score=82.05 Aligned_cols=130 Identities=15% Similarity=0.110 Sum_probs=90.8
Q ss_pred ccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhccc-CchHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Q 015916 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRI-PAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 31 ~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~-G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~ 108 (398)
+....+.|.+.++.|++..+.+.+.+...++... .++.|++.||+ ++|+++.++.++..++.+.+.+... .+.
T Consensus 214 ~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 288 (355)
T TIGR00896 214 YSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM-----HGL 288 (355)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh-----hHH
Confidence 4444567777667899999998876666677655 79999999999 5666777887788887776654311 122
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhc--cCCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
+ ...++.|++.+..++.......+.++ +++|.+.|+......+++++.|.+.+.+.+
T Consensus 289 ~---~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~ 347 (355)
T TIGR00896 289 W---AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHD 347 (355)
T ss_pred H---HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 13456677877766554555554443 357999999888778888888888887764
No 186
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.42 E-value=2.1e-05 Score=77.56 Aligned_cols=118 Identities=11% Similarity=-0.092 Sum_probs=73.5
Q ss_pred HHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Q 015916 40 LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (398)
Q Consensus 40 l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (398)
+++++|++..+.+.......++.. ..++.|++.||+|+|+.+.++..+..++.+.+.+.. +.+..+....+.
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~ 302 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSP-------SHAVSLFGITLI 302 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHH
Confidence 467889999888876555555554 478999999999999999999988888877766531 222222222233
Q ss_pred hhhhhhhhhHHHHHHHHhhc--cCCcchHHHHHhhhhhhHHHHHHHHHhH
Q 015916 119 GNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDLCSAL 166 (398)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~~l~~~~ 166 (398)
+.|.+..+.. ....+..| ++.|.+.++...+..+|+.+.+.+...+
T Consensus 303 ~~g~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 303 CAGFSVGFGV--AMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVL 350 (392)
T ss_pred HHHHHHHhHH--HHHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333332222 22333445 3347777666656566666666665543
No 187
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.39 E-value=4.8e-06 Score=83.20 Aligned_cols=146 Identities=14% Similarity=0.106 Sum_probs=98.3
Q ss_pred ChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhh
Q 015916 47 TQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWM 125 (398)
Q Consensus 47 s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~ 125 (398)
+..+.+++.....++... .++.|++.||+|+|+++.++.++..++++...+. . .+.+.+++..++.|++.+..
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~g~~~~~~ 328 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA--G----SNLPLILVLIILAGFGQNFV 328 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--c----hhHHHHHHHHHHHHHHHHHH
Confidence 344555554444555554 7899999999999999999998888887766542 1 23455555667777877776
Q ss_pred hhHHHHHHHHhhc--------cCCcchHHHHHhhhhhhHHHHHHHHHhHcCC-----C-------hhHHHHHHHHHHHHH
Q 015916 126 NTAVLVTCIRNFR--------RNRGPVSGILKGYVGLSTAIFTDLCSALFAD-----D-------PAKFLFMLAIVPFVV 185 (398)
Q Consensus 126 ~~~~~~~~~~~Fp--------~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-----~-------~~~~~~~~~~~~~~i 185 (398)
........++..| +++|.+.|+.+....+|..+.+.+.+.+++. + ..........+|++.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~~~~~~~~~~~~~~~~~~~~~p~i~ 408 (437)
T TIGR00792 329 TGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYVANAAQSPITLNGIKILMFAVPALF 408 (437)
T ss_pred HHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCCHHHHHHHHHHHHHHHHHH
Confidence 6666666666543 3479999999998888888888887776531 1 023444555666666
Q ss_pred HHhhhhccc-ccCC
Q 015916 186 CLGAIFFLR-ETTP 198 (398)
Q Consensus 186 ~~~~~~~l~-~~p~ 198 (398)
.+++.+++. ..|-
T Consensus 409 ~~~~~~~~~~~y~l 422 (437)
T TIGR00792 409 LLLAAIIIGRFYKL 422 (437)
T ss_pred HHHHHHHHHHHeeC
Confidence 666666553 4443
No 188
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.39 E-value=1.3e-05 Score=79.48 Aligned_cols=121 Identities=15% Similarity=-0.028 Sum_probs=88.2
Q ss_pred HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Q 015916 40 LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (398)
Q Consensus 40 l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (398)
+++.+|.+..+.+++.....++... ++..+++.||+++|+++..+. ..++..+.+.+. ++++...+..++.
T Consensus 232 ~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~-------~~~~~~~~~~~~~ 303 (393)
T PRK11195 232 APVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQ-------HSLLPAYPLLILI 303 (393)
T ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHH-------hHHHHHHHHHHHH
Confidence 5677999999999977777777765 789999999999999888775 333333333321 3455555566677
Q ss_pred hhhhhhhhhHHHHHHHHhhccC--CcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 119 GNSTTWMNTAVLVTCIRNFRRN--RGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp~~--RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
|++.+....+..+...+.-|++ ||++.++.+....++..+...+...+..
T Consensus 304 G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~ 355 (393)
T PRK11195 304 GALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVK 355 (393)
T ss_pred HHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 8888876666666666665553 6999999999998988888877775543
No 189
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.31 E-value=2.6e-05 Score=76.65 Aligned_cols=151 Identities=9% Similarity=0.061 Sum_probs=83.2
Q ss_pred ccccccccHHHHHHHcCCChhhHHHHHHHHHhhhhhhhhhhhhhcccC---chHHHHH-HHHHHHHHHHHHHHHHhcccC
Q 015916 29 NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRIP---APIILLI-GSLEGLVGYGAQWLVVSRKIQ 104 (398)
Q Consensus 29 ~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G---~r~~~~~-g~~~~~ig~~~~~~~~~~~~~ 104 (398)
..|.+..+.|++-++.|++.. .+.......+... +..+++.||.. +|+.... ..++.+++.....+.
T Consensus 207 ~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~--~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~------ 277 (368)
T TIGR00903 207 LFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGL--IGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFE------ 277 (368)
T ss_pred HHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHH--HHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHc------
Confidence 345666788887677788764 3443222222222 22356666654 3444332 333333333333221
Q ss_pred CchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHH
Q 015916 105 PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPF 183 (398)
Q Consensus 105 ~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 183 (398)
.+.+...+...+.++.....+.......++.+|+ .||++.|+......+|+.+.+.+...++. +....+..++ .+.
T Consensus 278 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~-~~~~~f~~~~-~~~ 354 (368)
T TIGR00903 278 -LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS-SAEAYFTFLA-ILI 354 (368)
T ss_pred -cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-CHHHHHHHHH-HHH
Confidence 1222223333444444444444455678899996 69999999999999999888888877764 3233333333 344
Q ss_pred HHHHhhhh
Q 015916 184 VVCLGAIF 191 (398)
Q Consensus 184 ~i~~~~~~ 191 (398)
+++.+..+
T Consensus 355 ~i~~~~~~ 362 (368)
T TIGR00903 355 TIAFAIAL 362 (368)
T ss_pred HHHHHHHH
Confidence 44444444
No 190
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.31 E-value=5.7e-06 Score=82.47 Aligned_cols=134 Identities=10% Similarity=0.042 Sum_probs=81.1
Q ss_pred ccccccccHHHHHHHc--CCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHH-HHHHHHHHHHHHHHHHHHHhcccC
Q 015916 29 NNYTFSNYSDALKTLM--NLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPII-LLIGSLEGLVGYGAQWLVVSRKIQ 104 (398)
Q Consensus 29 ~~~~~s~~~~~l~~~~--g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~-~~~g~~~~~ig~~~~~~~~~~~~~ 104 (398)
..+.+..+.|++-+++ +.+..+.+.+.....++... .++.|++.||+++|+. +....++..+++.+. .. . .
T Consensus 257 ~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~-~~-~---~ 331 (412)
T TIGR02332 257 TLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLA-SA-T---D 331 (412)
T ss_pred HHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHH-Hh-c---C
Confidence 3455566788876654 56777777766666666655 6899999999998775 334443444443222 11 1 1
Q ss_pred CchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCC
Q 015916 105 PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 105 ~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 169 (398)
.+... .....+.+.|.............+.+|+ +||++.|+......+|+++.+.+.+.+.+.
T Consensus 332 -~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~ 395 (412)
T TIGR02332 332 -HNLIQ-LLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDA 395 (412)
T ss_pred -CHHHH-HHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccccccc
Confidence 12211 1111222222221112222333566774 699999999999999999999998887764
No 191
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.30 E-value=1e-05 Score=80.26 Aligned_cols=128 Identities=13% Similarity=-0.042 Sum_probs=87.2
Q ss_pred ccHHHHHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhh-hcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHH
Q 015916 35 NYSDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLA-SDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l-~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~ 112 (398)
.+.|.+.++.+.+..+.+++.....++. ....+.+++ .||++.|+.+..+.++.+++.+++.+. ++++.+.
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~ 301 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV-------SNLQQLF 301 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh-------hhHHHHH
Confidence 3456654454446677777544444433 334444554 456777877888888888887766543 3455555
Q ss_pred HHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCC
Q 015916 113 VFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 169 (398)
+...+.+.|.+...+.....+.+..|+ +||++.|+.....++|+.+.+.+.+.+.+.
T Consensus 302 ~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 302 TLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 555666777776655666777888884 699999999999999999999988888764
No 192
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.28 E-value=4.3e-06 Score=80.36 Aligned_cols=125 Identities=20% Similarity=0.107 Sum_probs=92.8
Q ss_pred cccccHHHH-HHHcCCC-hhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Q 015916 32 TFSNYSDAL-KTLMNLT-QLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 32 ~~s~~~~~l-~~~~g~s-~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~ 108 (398)
.+..+.|.+ ++++|++ ..+.+.+.....+... ..++.|++.||+|+|+...+......++.+.+...... .+.
T Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 299 (352)
T PF07690_consen 224 GFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS----SSP 299 (352)
T ss_dssp HHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH----CHH
T ss_pred HhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh----hhH
Confidence 355666775 8889999 7888875555555554 47899999999999888888777777766655432111 233
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHH
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFT 160 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~ 160 (398)
.......++.|++.+..+......+.+.+|+ +||++.|+.....++|+.+.|
T Consensus 300 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 300 VWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 4444466677888887778888888999985 699999999999999988875
No 193
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.28 E-value=1.4e-07 Score=96.82 Aligned_cols=297 Identities=16% Similarity=0.079 Sum_probs=2.8
Q ss_pred ccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHH--Hhcc---------
Q 015916 35 NYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLV--VSRK--------- 102 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~--~~~~--------- 102 (398)
....+++++|+++.+|.+++.+...++..+ .++..++.+|..|-+.+-+|.+++++|.+++++- ..+.
T Consensus 24 ~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~ 103 (539)
T PF03137_consen 24 SSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNS 103 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccc
Confidence 445679999999999999999999999865 7888899999888888999999999999887641 0000
Q ss_pred ------------------------------cCCch--HHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHH
Q 015916 103 ------------------------------IQPLS--YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILK 149 (398)
Q Consensus 103 ------------------------------~~~~~--~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~ 149 (398)
..+.+ ++.++++.++.|+|..-.|+...+++=++-++ +-+.-+|+..
T Consensus 104 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~ 183 (539)
T PF03137_consen 104 NGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILY 183 (539)
T ss_dssp ------------------------------------------------SSS-----------------------------
T ss_pred ccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhh
Confidence 00001 23334568889999988888888888888875 4688888888
Q ss_pred hhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhcccccCCCC---CCchhhhhhhhHHHHHHHHHHHHHHH
Q 015916 150 GYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPAS---TVDEEKEEAKYFSIINTVAIVVALYL 226 (398)
Q Consensus 150 ~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (398)
+...+|.++.-.+.+.+..- ++ +.++.. ..-...+..|-.+. +++ |+
T Consensus 184 ~~~~lGPa~Gf~lg~~~L~~----------------------yv-D~~~~~~~~~~i~p~dp~WvGAW-WLG------fl 233 (539)
T PF03137_consen 184 AMSILGPALGFLLGSFCLRI----------------------YV-DFPKVPPDGVGITPSDPRWVGAW-WLG------FL 233 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhhccHHHHHHHHHHHHhc----------------------ee-CCccccccCCCCCCCCccHHHHH-HHH------HH
Confidence 88777766655544433320 00 111100 00000122222111 111 11
Q ss_pred HHHhhccCCccchhHHHHHHHHHHHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCCCCCccchhhhcchhh
Q 015916 227 QVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVA 306 (398)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 306 (398)
.. ..+.++...|+..+.++ +.+. ++...+ + +..+. +++..+.+... +++
T Consensus 234 i~----------------g~~~~l~aipl~~FPk~-lp~~--~~~~~~----~-~~~~~---~~~~~~~~~~~----~~~ 282 (539)
T PF03137_consen 234 IC----------------GILLFLSAIPLFFFPKK-LPGT--SERQEE----K-ESSER---KEEDSDKDSFK----DPK 282 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HH----------------HHHHHHHHHHHHcCCcc-CCCc--ccccch----h-hhhhc---chhhhhhhccc----ccc
Confidence 10 11223344555443322 1100 000000 0 00000 00000000000 000
Q ss_pred hhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccceeeeeechHHHHHHh-CCC--chhHHHHHHHH-HHHHhh
Q 015916 307 VVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLAL-GYV--DVSIFVSLTSI-WGFFGR 382 (398)
Q Consensus 307 ~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~~-g~~--~~a~~vsl~si-~~~~GR 382 (398)
+ .+. ......+--.+.++++|||-|-...++..+-.....++...++.+++.. +.+ +++.+.++..+ +.++|-
T Consensus 283 ~--~~~-~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~ 359 (539)
T PF03137_consen 283 S--KKS-FGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGI 359 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c--ccc-hhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheeh
Confidence 0 000 0000011124678999999999998888888888888889999888865 554 46667766666 667899
Q ss_pred hhhhhhhHHHHhH
Q 015916 383 IISGSVSEYFIKM 395 (398)
Q Consensus 383 l~~G~lsD~~~~~ 395 (398)
+++|++..|+.-+
T Consensus 360 llGG~ivkk~kl~ 372 (539)
T PF03137_consen 360 LLGGYIVKKFKLS 372 (539)
T ss_dssp -------------
T ss_pred heEEEEEEEecCc
Confidence 9999999887543
No 194
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.27 E-value=4.9e-06 Score=82.00 Aligned_cols=130 Identities=11% Similarity=0.124 Sum_probs=103.0
Q ss_pred hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccC-Cc
Q 015916 64 FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRN-RG 142 (398)
Q Consensus 64 ~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG 142 (398)
...+..++.+|+|+|+.++++.+++++=+..++++ ++.+.+.+...+-|+-.+....+...++++.||+| .+
T Consensus 275 ~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~-------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsA 347 (412)
T PF01306_consen 275 MMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA-------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSA 347 (412)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT---------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHH
T ss_pred HHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh-------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHH
Confidence 35688999999999999999999999988887765 56788888899999999998899999999999976 56
Q ss_pred chHHHH-HhhhhhhHHHHHHHHHhHcCCCh-hHHHHHHHHHHHHHHHhhhhcccccCCCC
Q 015916 143 PVSGIL-KGYVGLSTAIFTDLCSALFADDP-AKFLFMLAIVPFVVCLGAIFFLRETTPAS 200 (398)
Q Consensus 143 ~a~gi~-~~~~glg~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~l~~~p~~~ 200 (398)
++..+. ....++|..+++++.+.+.+.-+ ...++.++.+.....+++.+.++..++..
T Consensus 348 t~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~~ 407 (412)
T PF01306_consen 348 TLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQI 407 (412)
T ss_dssp HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSSTT
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCccc
Confidence 777774 56678999999999999988744 44566777777888888888887766543
No 195
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.27 E-value=1.5e-05 Score=89.71 Aligned_cols=133 Identities=14% Similarity=-0.049 Sum_probs=97.4
Q ss_pred cHHH-HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhc------------
Q 015916 36 YSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSR------------ 101 (398)
Q Consensus 36 ~~~~-l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~------------ 101 (398)
+.|. +++.+|.+..+.+++.....+++++ +++.|++.||+++++.+..+.++.+++.+.+.+....
T Consensus 247 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (1140)
T PRK06814 247 QLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSIL 326 (1140)
T ss_pred HhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchh
Confidence 4455 4667899999999977777778765 7899999999888887777776666555544331000
Q ss_pred -ccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 102 -KIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 102 -~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
.....+.|.+++..++.|++.+....+..+.+.+.+|+ .||+++|+.+....+|..+.+.+...+..
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 327 VFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred hhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00012456666677778888887777778888999985 69999999999988888888888777653
No 196
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.26 E-value=3.7e-06 Score=81.70 Aligned_cols=121 Identities=21% Similarity=0.144 Sum_probs=77.3
Q ss_pred cccccHHH-HHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 32 TFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 32 ~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
.+..+.|. +++.+|++..+.+.+.....+... ..++.|++.||+|+|+.+..+......+..++.+..... .+.+
T Consensus 243 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 319 (366)
T TIGR00886 243 GVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSP---LSLA 319 (366)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCc---chHH
Confidence 33444444 467789999998876555555554 478999999999999988888777776666554421110 0333
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhh
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLS 155 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg 155 (398)
......++.+.+.|..+.......++.+|++||.+.|+..+...+|
T Consensus 320 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 320 VFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 3322222333333333334455667788889999999988876665
No 197
>PRK09848 glucuronide transporter; Provisional
Probab=98.23 E-value=1.4e-05 Score=80.39 Aligned_cols=153 Identities=18% Similarity=0.074 Sum_probs=103.1
Q ss_pred HHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHh
Q 015916 41 KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGG 119 (398)
Q Consensus 41 ~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G 119 (398)
++.+|.+.....+......++.. ..++.+++.||+|+|+++.+|.++..++++.+.+. . ..+++.+++..++.|
T Consensus 256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~--~---~~~~~~~~~~~~l~g 330 (448)
T PRK09848 256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV--S---VWSLPVALVALAIAS 330 (448)
T ss_pred eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--C---chhHHHHHHHHHHHH
Confidence 45577765544444444344444 47899999999999999999999888888776542 1 134566556667788
Q ss_pred hhhhhhhhHHHHHHHHhhcc--------CCcchHHHHHhhhhhhHHHHHHHHHhHcC-----CC---h----hHHHHHHH
Q 015916 120 NSTTWMNTAVLVTCIRNFRR--------NRGPVSGILKGYVGLSTAIFTDLCSALFA-----DD---P----AKFLFMLA 179 (398)
Q Consensus 120 ~g~g~~~~~~~~~~~~~Fp~--------~RG~a~gi~~~~~glg~~i~~~l~~~~~~-----~~---~----~~~~~~~~ 179 (398)
+|.+..........++.-|. ++|...|+.+....+|.++.+.+...+++ .+ . ........
T Consensus 331 ~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~~~~~~~~~~~~~~i~~~~~ 410 (448)
T PRK09848 331 IGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQTPEVIMGIRTSIA 410 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHHHHH
Confidence 88887776666666666542 25999999988888888888777666542 10 1 23444555
Q ss_pred HHHHHHHHhhhhcccccCC
Q 015916 180 IVPFVVCLGAIFFLRETTP 198 (398)
Q Consensus 180 ~~~~~i~~~~~~~l~~~p~ 198 (398)
.+|++..+++.+++...|-
T Consensus 411 ~~p~~~~~~~~~~~~~y~l 429 (448)
T PRK09848 411 LVPCGFMLLAFVIIWFYPL 429 (448)
T ss_pred HHHHHHHHHHHHHHHHeeC
Confidence 6777777777766655554
No 198
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.22 E-value=1.2e-05 Score=78.00 Aligned_cols=132 Identities=14% Similarity=0.056 Sum_probs=80.1
Q ss_pred ccccHHH-HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHH---HHHHHHHHHHHhcccCCch
Q 015916 33 FSNYSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEG---LVGYGAQWLVVSRKIQPLS 107 (398)
Q Consensus 33 ~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~---~ig~~~~~~~~~~~~~~~~ 107 (398)
+..+.|. +++++|++..+.+.......++... .++.|++.||+++|+......... .++...... . +..+
T Consensus 235 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~ 309 (379)
T TIGR00881 235 ILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL---N--PAAN 309 (379)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc---C--cchh
Confidence 3344555 4677899999998866666666654 789999999864333222222211 112221111 0 0123
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCC
Q 015916 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 169 (398)
.+...+..++.|...............+.+|+ +||++.|+......+|+.+.+.+.+.+.+.
T Consensus 310 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 372 (379)
T TIGR00881 310 PLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG 372 (379)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh
Confidence 33333444455543333333344567788885 699999999999999999999888877653
No 199
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.14 E-value=5.9e-05 Score=69.78 Aligned_cols=148 Identities=13% Similarity=0.120 Sum_probs=101.4
Q ss_pred CcHHHHHHHHHHHHHhcccccccccHHH-HHHHcCCChhhHHHH-HHHHHhhhhhhhhhhhhhcccCchHHHHHHHHHHH
Q 015916 12 GKWLGFVTAVWVQAISGNNYTFSNYSDA-LKTLMNLTQLELNNL-SVVKDIGKAFGLLAGLASDRIPAPIILLIGSLEGL 89 (398)
Q Consensus 12 ~~w~~l~~~~~~~~~~g~~~~~s~~~~~-l~~~~g~s~~~~~~i-~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~ 89 (398)
.-|+..+.|++-....-..++. .|- ++++||+|..+.+.+ ++...+.....|+.|.++|++|++.....++.+..
T Consensus 265 pfw~~~iicv~yyva~fPFi~l---g~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~t 341 (459)
T KOG4686|consen 265 PFWVLVIICVLYYVAWFPFITL---GPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILT 341 (459)
T ss_pred cHHHHHHHHHHHHHHHHHHhhh---hHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHH
Confidence 3477666666544332223322 222 689999999998884 66666677779999999999999988777666554
Q ss_pred -HHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 90 -VGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 90 -ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
++...+.+++. .=++...+.|++-.+.-.+-...++...|+ +-|++-|...+...+|-++.+.+.+.+.
T Consensus 342 l~~H~~l~Ft~l---------sPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~ 412 (459)
T KOG4686|consen 342 LLGHSGLFFTFL---------SPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIA 412 (459)
T ss_pred HHHhhhHHhhhc---------cHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheee
Confidence 45665555422 123344455665554433456667778897 4799999999999999998888887777
Q ss_pred CCCh
Q 015916 168 ADDP 171 (398)
Q Consensus 168 ~~~~ 171 (398)
+++.
T Consensus 413 d~~g 416 (459)
T KOG4686|consen 413 DGDG 416 (459)
T ss_pred cCCC
Confidence 6543
No 200
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.10 E-value=8.9e-05 Score=74.31 Aligned_cols=188 Identities=13% Similarity=0.092 Sum_probs=119.5
Q ss_pred CCCCcHHHHHHHHHHHHHhccc-cc-ccccHHHHHH-HcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCc-hHHHHH
Q 015916 9 SSAGKWLGFVTAVWVQAISGNN-YT-FSNYSDALKT-LMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPA-PIILLI 83 (398)
Q Consensus 9 ~~~~~w~~l~~~~~~~~~~g~~-~~-~s~~~~~l~~-~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~-r~~~~~ 83 (398)
..+.+|+.+..+.+.++..+.. +. +...-|++++ |.+-+.+..+++..+..++.+. .+..|+...|.|. |+.++.
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~ 107 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIV 107 (488)
T ss_pred ccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHH
Confidence 3456788777777666544432 11 1222244443 4667777888876777788765 8999999999986 888899
Q ss_pred HHHHHHHHHHHH-HHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHH-HhhccCCcchHHHHHhhhhhhHHHHHH
Q 015916 84 GSLEGLVGYGAQ-WLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCI-RNFRRNRGPVSGILKGYVGLSTAIFTD 161 (398)
Q Consensus 84 g~~~~~ig~~~~-~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~-~~Fp~~RG~a~gi~~~~~glg~~i~~~ 161 (398)
|.++..+|.++- ++. .. ++...+.+.+.|++.|+|.+.. ...-.+++ ...++.|-+|.+....++-+|..++|.
T Consensus 108 s~ii~~~g~llY~~l~--~~-~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~ 183 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALA--YV-PNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPT 183 (488)
T ss_pred HHHHHHHHHHHHHHHH--hc-ccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHH
Confidence 999999998876 332 21 2225667778999999998754 34455544 456788888888888877777666655
Q ss_pred HHHhHcC---C-----C-----hhH-HHHHHHHHHHHHHHhhhhcccccCCCC
Q 015916 162 LCSALFA---D-----D-----PAK-FLFMLAIVPFVVCLGAIFFLRETTPAS 200 (398)
Q Consensus 162 l~~~~~~---~-----~-----~~~-~~~~~~~~~~~i~~~~~~~l~~~p~~~ 200 (398)
+...+-+ . . ... -.++.++...+..+...++++|.++..
T Consensus 184 ~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 184 IQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred HHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 4333321 1 0 111 223333344444555566778887664
No 201
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.09 E-value=3.7e-06 Score=80.21 Aligned_cols=127 Identities=9% Similarity=-0.009 Sum_probs=88.5
Q ss_pred hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccC-Cc
Q 015916 64 FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRN-RG 142 (398)
Q Consensus 64 ~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG 142 (398)
..++.++++||+|||++|....+++++..+++..+.... .-..+++.+|.+.-.+ +.+...+..+.||.. |+
T Consensus 397 GlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn---~~tvllf~arafisg~----fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 397 GLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRN---AYTVLLFTARAFISGA----FQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred chhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcc---hhHHHHHHHHHHHhch----heEEEEecCcccchhhhh
Confidence 357899999999999999999999999888877653321 1123345667654333 334456788999965 99
Q ss_pred chHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhcccccCCC
Q 015916 143 PVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPA 199 (398)
Q Consensus 143 ~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~ 199 (398)
+++|...+..-+|+.+.|.+. +..+......+++-....+++.++.+++|..++.
T Consensus 470 tgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKG 524 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCC
Confidence 999999999999988877776 3333333334444445566677777777766654
No 202
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.08 E-value=5e-05 Score=75.98 Aligned_cols=151 Identities=15% Similarity=0.187 Sum_probs=103.3
Q ss_pred HHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHh
Q 015916 41 KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGG 119 (398)
Q Consensus 41 ~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G 119 (398)
+..+|.+ ...+.+.....+.... .++.+++.||+|+|+++..+.++.+++.+...+... ++.+.+++..++.|
T Consensus 253 ~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~l~g 326 (428)
T PF13347_consen 253 TYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP-----GSPWLVLILFILAG 326 (428)
T ss_pred HHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHhH
Confidence 4445655 4455555555566554 789999999999999999999999999998877521 25677778888899
Q ss_pred hhhhhhhhHHHHHHHHhhc--------cCCcchHHHHHhhhhhhHHHHHHHHHhHcCC-----C--------hhHHHHHH
Q 015916 120 NSTTWMNTAVLVTCIRNFR--------RNRGPVSGILKGYVGLSTAIFTDLCSALFAD-----D--------PAKFLFML 178 (398)
Q Consensus 120 ~g~g~~~~~~~~~~~~~Fp--------~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-----~--------~~~~~~~~ 178 (398)
++.+..+.......++..+ ++.|...|+.....-++..+.+.+...+++. + ........
T Consensus 327 i~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~~~~~~q~~~~~~~i~~~~ 406 (428)
T PF13347_consen 327 IGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYDANAAVQSASALSGIRILF 406 (428)
T ss_pred hhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHH
Confidence 9998877777777777664 1247778877777777777766665554321 1 12344555
Q ss_pred HHHHHHHHHhhhhcccccC
Q 015916 179 AIVPFVVCLGAIFFLRETT 197 (398)
Q Consensus 179 ~~~~~~i~~~~~~~l~~~p 197 (398)
+.+|++..+++..+++..|
T Consensus 407 ~~~p~~~~~~~~i~~~~y~ 425 (428)
T PF13347_consen 407 SIVPAIFLLLAIIFMRFYP 425 (428)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 5566666666665555444
No 203
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.06 E-value=0.00011 Score=75.46 Aligned_cols=169 Identities=15% Similarity=0.095 Sum_probs=100.5
Q ss_pred HhcccccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccC
Q 015916 26 ISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQ 104 (398)
Q Consensus 26 ~~g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~ 104 (398)
++|.. ....|.+++-+..|.+... .+.+....+... ...++..+.||+|||+.++.|...+.++.++++........
T Consensus 308 ~tG~~-~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~ 385 (513)
T KOG0254|consen 308 LTGIN-YVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALY 385 (513)
T ss_pred HhCCc-eEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhcc
Confidence 44543 3345777777777777543 222222222333 35666899999999999999999999999888764332110
Q ss_pred ------CchHHH-HHHHHHHHhhhhhhhhhHHHHHHHHhhccC-CcchHHHHHhhhhhhHHHHHHHHHhHcCCC--hhHH
Q 015916 105 ------PLSYWQ-MCVFLCMGGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGYVGLSTAIFTDLCSALFADD--PAKF 174 (398)
Q Consensus 105 ------~~~~~~-l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~~~~~--~~~~ 174 (398)
...... ..+...+..+..+.. ..+.....+.||.+ |+++.++..+...+.+.+....+....+.. ...+
T Consensus 386 ~~~~~~~~~~~~~~~~~~~v~~f~~g~g-~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f 464 (513)
T KOG0254|consen 386 YPNSSKGAGWLAIVFLCLFIFSFAIGWG-PVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTF 464 (513)
T ss_pred CCCcccchhHHHHHHHHHHHHHHhcccc-cchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchH
Confidence 001111 112333444444543 34556789999965 999999999998888887766665555442 3444
Q ss_pred HHHHHHHHHHHHHhhhhcccccC
Q 015916 175 LFMLAIVPFVVCLGAIFFLRETT 197 (398)
Q Consensus 175 ~~~~~~~~~~i~~~~~~~l~~~p 197 (398)
.++.++..........+++||..
T Consensus 465 ~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 465 GYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred HHHHHHHHHHHHHHheEEcccCC
Confidence 44444433332223344444443
No 204
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.04 E-value=0.00025 Score=70.67 Aligned_cols=166 Identities=10% Similarity=0.028 Sum_probs=90.3
Q ss_pred cccccccHHHH-HHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCch
Q 015916 30 NYTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLS 107 (398)
Q Consensus 30 ~~~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~ 107 (398)
.+.+..+.|.+ ++.+|++..+.++.......+... +.+.+++.+|.++++....+..+..+|..++...... .+ ++
T Consensus 234 ~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~-~~-~~ 311 (413)
T PRK15403 234 MMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLL-WP-HV 311 (413)
T ss_pred HHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHH-cc-cc
Confidence 34555556654 667899999999865555555544 5777776655444444433344444444443322100 01 23
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc--CCcchHHHHHhhhhhhHHHHHHHHHhHcCCC-hhHHHHHHHHHHHH
Q 015916 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR--NRGPVSGILKGYVGLSTAIFTDLCSALFADD-PAKFLFMLAIVPFV 184 (398)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~--~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~ 184 (398)
.+..++..++.+.|.+........ ..++++ .+|++.++.......+..+.+...+.+.+.. .+.+.....+...+
T Consensus 312 ~~~~~~~~~l~~~G~~~~~p~~~~--~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 312 WLWSVLGTSLYAFGIGLIFPTLFR--FTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHH--HHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 333344566667777765433332 335543 4899999988877777777777766654432 33343333333333
Q ss_pred HHHhhhhcccccCCC
Q 015916 185 VCLGAIFFLRETTPA 199 (398)
Q Consensus 185 i~~~~~~~l~~~p~~ 199 (398)
.........|.+|.+
T Consensus 390 ~~~~~~~~~~~~~~~ 404 (413)
T PRK15403 390 VVFTLAGLLNRVRQH 404 (413)
T ss_pred HHHHHHHHHhhhhhh
Confidence 333334444444443
No 205
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.95 E-value=5.5e-05 Score=77.29 Aligned_cols=156 Identities=13% Similarity=0.143 Sum_probs=109.5
Q ss_pred cccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHH--HHHHHHHHHHHHHHHHHHhcccCCchH
Q 015916 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIIL--LIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (398)
Q Consensus 32 ~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~--~~g~~~~~ig~~~~~~~~~~~~~~~~~ 108 (398)
...++.|.+.+..+++..+.+...+...+.... -++.|++.|+...++.. .++.+..+++.+.+.++ +++
T Consensus 316 ~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~-------~~~ 388 (509)
T KOG2504|consen 316 VPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFA-------TTY 388 (509)
T ss_pred HHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHh-------ccH
Confidence 445677888889999999999966655566655 59999999999954444 44444444444333332 568
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcCC-ChhHHHHHHHHHHHHHH
Q 015916 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVC 186 (398)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~i~ 186 (398)
+.+..+.++.|+..|....-...++.+..+ ++-..+.|+.....+++..+.+++.+.+.+. +.+...+..+.+..+++
T Consensus 389 ~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s 468 (509)
T KOG2504|consen 389 VGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLS 468 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHH
Confidence 888888899998888765544457778887 5679999999999999999999999977764 22444444444444444
Q ss_pred Hhhhhccc
Q 015916 187 LGAIFFLR 194 (398)
Q Consensus 187 ~~~~~~l~ 194 (398)
..+.++.+
T Consensus 469 ~~~~~~~~ 476 (509)
T KOG2504|consen 469 AVLLLILR 476 (509)
T ss_pred HHHHHHhH
Confidence 44444444
No 206
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.94 E-value=7.4e-05 Score=76.26 Aligned_cols=107 Identities=7% Similarity=-0.042 Sum_probs=80.4
Q ss_pred hhh-hhhhhhhhhhcccCchHH-------HHHHHHHHHHHHHHHHH---HHhcccCCchHHHHHHHHHHHhhhhhhhhhH
Q 015916 60 IGK-AFGLLAGLASDRIPAPII-------LLIGSLEGLVGYGAQWL---VVSRKIQPLSYWQMCVFLCMGGNSTTWMNTA 128 (398)
Q Consensus 60 ~~~-~~~~~~G~l~Dr~G~r~~-------~~~g~~~~~ig~~~~~~---~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~ 128 (398)
+.. +++|+.|++.||+|+|+. +.+|.++.+++++.++. ...+.....++|.+....++.|+|.++..++
T Consensus 320 ~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~ 399 (489)
T PRK10207 320 FWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISAL 399 (489)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHH
Confidence 444 347889999999999973 77888888888765432 1111111134666666788899999998888
Q ss_pred HHHHHHHhhccC-CcchHHHHHhhhhhhHHHHHHHHHhH
Q 015916 129 VLVTCIRNFRRN-RGPVSGILKGYVGLSTAIFTDLCSAL 166 (398)
Q Consensus 129 ~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~ 166 (398)
....+.+..|++ +|.++|+.....++|+.+...+.+..
T Consensus 400 g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 400 GLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999965 99999999999999999988776544
No 207
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.94 E-value=0.00077 Score=65.83 Aligned_cols=130 Identities=12% Similarity=0.047 Sum_probs=88.1
Q ss_pred HHHHcCCChhhHHHHHHHHHhhhhhhhhhhhhhcccC-----chHHHHH-HHHHHHHHHHHHHHHHh--cc---cC--Cc
Q 015916 40 LKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRIP-----APIILLI-GSLEGLVGYGAQWLVVS--RK---IQ--PL 106 (398)
Q Consensus 40 l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G-----~r~~~~~-g~~~~~ig~~~~~~~~~--~~---~~--~~ 106 (398)
+..|++++..-.+.....-.+....-+..|..+|+++ ||...++ |.++.+.|..++.+... .. .. ..
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 4567888877666644444455556789999999999 7776554 45555555555544321 11 00 11
Q ss_pred hHHHHH--HHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcCC
Q 015916 107 SYWQMC--VFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 107 ~~~~l~--~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 169 (398)
..+... +...+.|+|.+..-++....+.+.-| ++|+++.++.....=+|-.+.+.+.+.++++
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~ 151 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP 151 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 233322 34677888888877888888888887 5799999999998878877877887777653
No 208
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.94 E-value=0.00016 Score=70.62 Aligned_cols=249 Identities=16% Similarity=0.121 Sum_probs=133.2
Q ss_pred HHHHHhhhhhhhhhhhhhcccCchHHHHHHHHHHH-HHHHHHHHHHhcccCCchHHH-HHHHHHHHhhhhhhhhhHHHHH
Q 015916 55 SVVKDIGKAFGLLAGLASDRIPAPIILLIGSLEGL-VGYGAQWLVVSRKIQPLSYWQ-MCVFLCMGGNSTTWMNTAVLVT 132 (398)
Q Consensus 55 ~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~-ig~~~~~~~~~~~~~~~~~~~-l~~~~~l~G~g~g~~~~~~~~~ 132 (398)
+....+-++.+|+-|.++|+.|+||-.+--..... +..+.+++.. +.+++. ..++..+..++.....+.....
T Consensus 65 aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~-----~~s~~~~~l~~~il~~i~~~~s~Vfyds~ 139 (438)
T COG2270 65 AIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIP-----PGSYLLLLLLFLILASIGFEFSNVFYDSM 139 (438)
T ss_pred HHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhC-----CCchHHHHHHHHHHHHHhcchhheehhhH
Confidence 33333444568999999999999987665444443 3444444431 113443 3445666677666666667777
Q ss_pred HHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCCchhhhhhhh
Q 015916 133 CIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKY 211 (398)
Q Consensus 133 ~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~~~~~~~~~~~ 211 (398)
..+..++ +-|+.+++....-.+|+.+.-.+....+-.... ...... ++..+|.. .++.|
T Consensus 140 L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~----------~~~~~~---l~~l~~~~-------~~~~r 199 (438)
T COG2270 140 LPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQ----------TGITII---LLGLPPAD-------GEDVR 199 (438)
T ss_pred hhhhcCccccCcccccccccccccchHHHHHHHHHHhcccc----------cceeEE---eeccCccc-------cccch
Confidence 8888876 458887777776677776654443222110000 000000 11222221 23334
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHhhhhhccccccccccccccCCCCCcchhhcccCCCCCCC
Q 015916 212 FSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGET 291 (398)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 291 (398)
...... +.+ .++...|+...++ +++. ...| +++
T Consensus 200 i~~~l~-----A~W----------------------~li~~iPm~~~v~---------~~~~--------~~~~--~~~- 232 (438)
T COG2270 200 ITGLLA-----ALW----------------------WLLFALPMILNVH---------DAEK--------ISSP--PPT- 232 (438)
T ss_pred hHHHHH-----HHH----------------------HHHHHhHHHhccc---------cccc--------cccc--chH-
Confidence 332211 111 1234466644321 1100 0001 000
Q ss_pred CCCccchhhhcchhhhhhhhhcccCCCcCCcchHHHHhccHhHHHHHHHHHhcccceeeeeechHHHHH-HhCCCchh--
Q 015916 292 TGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGL-ALGYVDVS-- 368 (398)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~t~~~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~-~~g~~~~a-- 368 (398)
.. .+. . + +-..|.||..+.++.-++.++-++..-...+++...+.+.. ++|.++..
T Consensus 233 ------~l-----~~g--~---k-----~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~ll 291 (438)
T COG2270 233 ------AL-----RNG--F---K-----ELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELL 291 (438)
T ss_pred ------HH-----HHH--H---H-----HHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHH
Confidence 00 000 1 0 01346788877777666666655554444455555556666 67887543
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 369 IFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 369 ~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
......++...+|-+++|+|.||++.|.
T Consensus 292 l~g~~~~vvA~lg~ii~g~Ld~rfg~k~ 319 (438)
T COG2270 292 LIGIALSVVAALGAIIAGFLDERFGSKP 319 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCce
Confidence 4667788899999999999999999874
No 209
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.91 E-value=6.7e-05 Score=76.17 Aligned_cols=154 Identities=12% Similarity=-0.043 Sum_probs=107.0
Q ss_pred HHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhccc--C-CchHHHHHHHHHH
Q 015916 42 TLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKI--Q-PLSYWQMCVFLCM 117 (398)
Q Consensus 42 ~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~--~-~~~~~~l~~~~~l 117 (398)
+.+|++..+.+.+.....++.+. ....+++.+|++.|+++.++.++..++.+.......... . -.+.+.+....++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 46899999999976666666655 689999999999999999999999887755432111000 0 0112223334677
Q ss_pred HhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCC--------ChhHHHHHHHHHHHHHHHh
Q 015916 118 GGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD--------DPAKFLFMLAIVPFVVCLG 188 (398)
Q Consensus 118 ~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~--------~~~~~~~~~~~~~~~i~~~ 188 (398)
.+++.+..+.+....+.+..|+ .+|+..++..+..++|..+.+.+.+.+.+. +.......++..+.++.+.
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~ 440 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLP 440 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence 7888888888889999999996 589999999999999999888665555432 1122234444455556666
Q ss_pred hhhcccc
Q 015916 189 AIFFLRE 195 (398)
Q Consensus 189 ~~~~l~~ 195 (398)
..+++|+
T Consensus 441 ~~~llP~ 447 (468)
T TIGR00788 441 LLHLLPR 447 (468)
T ss_pred HHHhCCC
Confidence 6667776
No 210
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.90 E-value=0.00013 Score=71.23 Aligned_cols=138 Identities=14% Similarity=0.088 Sum_probs=86.5
Q ss_pred cccccccHHH-HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhccc--CchHHHHHHHHHH-HHHHHHHHHHHhcccC
Q 015916 30 NYTFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRI--PAPIILLIGSLEG-LVGYGAQWLVVSRKIQ 104 (398)
Q Consensus 30 ~~~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~--G~r~~~~~g~~~~-~ig~~~~~~~~~~~~~ 104 (398)
.|...-+.|- +.|..|+|..+.++..+..-.+++. .+++|+++||+ |+|..+.+...+. .++....++. +
T Consensus 268 R~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~-----~ 342 (448)
T COG2271 268 RYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA-----P 342 (448)
T ss_pred HHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC-----C
Confidence 3444455555 5778899999999977777777765 68999999994 7776655444333 3344443332 1
Q ss_pred CchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccC-CcchHHHHHhhhhh-hHHHHHHHHHhHcCCChh
Q 015916 105 PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGYVGL-STAIFTDLCSALFADDPA 172 (398)
Q Consensus 105 ~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~gl-g~~i~~~l~~~~~~~~~~ 172 (398)
+.+++...++.++.|+-...-....-....+.-||+ -|+|.|+...+..+ |++......+.+.+..+|
T Consensus 343 ~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW 412 (448)
T COG2271 343 NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGW 412 (448)
T ss_pred CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCC
Confidence 234555555666666544322222222344555876 89999999988888 555555555555555344
No 211
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.86 E-value=0.00032 Score=70.15 Aligned_cols=125 Identities=13% Similarity=0.019 Sum_probs=81.1
Q ss_pred HHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcc----cCchHH-HHHHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Q 015916 40 LKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDR----IPAPII-LLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (398)
Q Consensus 40 l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr----~G~r~~-~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~ 113 (398)
+.+.+|++...++.+....=+-- ..-|+.|.+.|| +||||. ++.|.+.+++.+.+++.... .....+....++
T Consensus 39 YTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~-~~~~~k~~ya~v 117 (467)
T COG2211 39 YTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPD-FSMTGKLIYALV 117 (467)
T ss_pred HhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCC-cccCcchHHHHH
Confidence 57789999999998544444444 457999999997 677665 55666788887777765421 110123333444
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHhh--ccCCcchHHHHHhhhhhhHHHHHHHHHh
Q 015916 114 FLCMGGNSTTWMNTAVLVTCIRNF--RRNRGPVSGILKGYVGLSTAIFTDLCSA 165 (398)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~F--p~~RG~a~gi~~~~~glg~~i~~~l~~~ 165 (398)
-..+.+++-.....+-.+...+.= |++|.+..+.-..+..+|..+...+...
T Consensus 118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~p 171 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPP 171 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666655555556655 4579999998888877776665554433
No 212
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.86 E-value=0.0011 Score=65.33 Aligned_cols=158 Identities=15% Similarity=0.055 Sum_probs=108.0
Q ss_pred cccHHHHHHH-cCCChhhHHH-HHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHH
Q 015916 34 SNYSDALKTL-MNLTQLELNN-LSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (398)
Q Consensus 34 s~~~~~l~~~-~g~s~~~~~~-i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~ 110 (398)
+...|.+.+. .|++..|++. +.-...=..+. .++...+.|..|.|++++++++...+.+.++-+. ++++.
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~-------~sv~~ 96 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG-------TSVLA 96 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH-------CcHHH
Confidence 4455667664 8999999987 44333333333 5788999999999999999999988888887654 46777
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC--CChhHHHHHHHHHHHHHHH
Q 015916 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA--DDPAKFLFMLAIVPFVVCL 187 (398)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~--~~~~~~~~~~~~~~~~i~~ 187 (398)
+-+.-+..|.+.+. ..+-..++-..-|+ +--++.+...+..-+|-.+.+.+...++. ......+..++.....+++
T Consensus 97 mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~ 175 (412)
T PF01770_consen 97 MQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL 175 (412)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 77777787877764 33444444433453 45677777777777776776666666554 2334556666777777777
Q ss_pred hhhhcccccCCC
Q 015916 188 GAIFFLRETTPA 199 (398)
Q Consensus 188 ~~~~~l~~~p~~ 199 (398)
+..+++|.+++.
T Consensus 176 ~~~~fLP~~~~S 187 (412)
T PF01770_consen 176 LIALFLPMPKRS 187 (412)
T ss_pred HHHHHcCCCCcc
Confidence 777777776654
No 213
>PRK09669 putative symporter YagG; Provisional
Probab=97.85 E-value=0.00033 Score=70.48 Aligned_cols=140 Identities=13% Similarity=0.086 Sum_probs=87.9
Q ss_pred HHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHH
Q 015916 54 LSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVT 132 (398)
Q Consensus 54 i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~ 132 (398)
+.....+..+. .++.+++.||+|+|+...++.+...++.....+. . .++.+.+++..++.|++.+.........
T Consensus 269 ~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 269 FLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFI--P---PSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh--C---cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444 5788999999999999998877666544333221 1 1345666666778888888777777777
Q ss_pred HHHhhc-------cC-CcchHHHHHhhhhhhHHHHHHHHHhHcC------C---Ch----hHHHHHHHHHHHHHHHhhhh
Q 015916 133 CIRNFR-------RN-RGPVSGILKGYVGLSTAIFTDLCSALFA------D---DP----AKFLFMLAIVPFVVCLGAIF 191 (398)
Q Consensus 133 ~~~~Fp-------~~-RG~a~gi~~~~~glg~~i~~~l~~~~~~------~---~~----~~~~~~~~~~~~~i~~~~~~ 191 (398)
+++..+ +| .|...|+......+|.++.+.+.+.+++ + +. .......+.+|++..+++.+
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~~~~~~q~~~~~~~i~~~~~~~p~~~~~~~~~ 423 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYVGGAAVQSASVLTTINLLFTVIPGVLFAGMAI 423 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777664 12 3666777766666666666655555432 1 11 23445566678777777777
Q ss_pred cccccCC
Q 015916 192 FLRETTP 198 (398)
Q Consensus 192 ~l~~~p~ 198 (398)
++...|-
T Consensus 424 ~~~~y~l 430 (444)
T PRK09669 424 ILNFYKL 430 (444)
T ss_pred HHHhccC
Confidence 7665554
No 214
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.78 E-value=0.00055 Score=69.55 Aligned_cols=119 Identities=8% Similarity=-0.045 Sum_probs=76.4
Q ss_pred ChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhh
Q 015916 47 TQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWM 125 (398)
Q Consensus 47 s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~ 125 (398)
+....+.+.....+..+. .++.+++.||+|+|+++.++.++..++.+........ ...+.+.+.+..++.|++.+..
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~l~g~~~~~~ 341 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLA--APHNALLIVIAGILLNIGTALF 341 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhcc--CchhHHHHHHHHHHHHHHHHHH
Confidence 344444544444444444 6889999999999999998888777666555332100 1134555556667777888777
Q ss_pred hhHHHHHHHHhhc-------cC-CcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 126 NTAVLVTCIRNFR-------RN-RGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 126 ~~~~~~~~~~~Fp-------~~-RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
......++++..+ +| .|...|......-+|.++.+.+.+.++
T Consensus 342 ~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 342 WVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVL 391 (473)
T ss_pred HHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666677776633 22 366778877777777777766666554
No 215
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.73 E-value=0.0006 Score=69.82 Aligned_cols=100 Identities=12% Similarity=-0.030 Sum_probs=77.6
Q ss_pred hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhccc--CCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CC
Q 015916 65 GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKI--QPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NR 141 (398)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~--~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~R 141 (398)
+...+++.||+++++.+.+|.++.++|++.+........ ...+.+++....++.|+|.++..+.....+.+.-|+ .|
T Consensus 337 ~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~r 416 (500)
T PRK09584 337 AAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLM 416 (500)
T ss_pred HHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHH
Confidence 334578888888889999999999999998776432100 012355566678899999998888888889999996 59
Q ss_pred cchHHHHHhhhhhhHHHHHHHHH
Q 015916 142 GPVSGILKGYVGLSTAIFTDLCS 164 (398)
Q Consensus 142 G~a~gi~~~~~glg~~i~~~l~~ 164 (398)
|+++|+......+|+.+...+.+
T Consensus 417 g~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 417 GFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888888777765
No 216
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.65 E-value=0.0014 Score=60.31 Aligned_cols=125 Identities=22% Similarity=0.139 Sum_probs=87.1
Q ss_pred ccHHHHHHHcCCCh--hhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHH
Q 015916 35 NYSDALKTLMNLTQ--LELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (398)
Q Consensus 35 ~~~~~l~~~~g~s~--~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l 111 (398)
...+.+..+++.+. .+.++......++... .++.|++.||+|+|+.+..+.....++.+...+... .+.+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 97 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN-----VGLALL 97 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc-----chHHHH
Confidence 34455566666555 3666665555666654 589999999999998888888765555444443210 236677
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHhhcc--CCcchHHHHHhh-hhhhHHHHHHHHH
Q 015916 112 CVFLCMGGNSTTWMNTAVLVTCIRNFRR--NRGPVSGILKGY-VGLSTAIFTDLCS 164 (398)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp~--~RG~a~gi~~~~-~glg~~i~~~l~~ 164 (398)
.+.+...|++.+..+........+++|+ +|+...+..... ..+|..+.+.+..
T Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T COG0477 98 LILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAG 153 (338)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888888887777888889999996 789999988884 5556555553333
No 217
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.62 E-value=0.0016 Score=64.89 Aligned_cols=95 Identities=8% Similarity=0.028 Sum_probs=68.7
Q ss_pred hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcch
Q 015916 65 GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPV 144 (398)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a 144 (398)
-+++|++.||+++|+++.+..+...+..++.... ++... .....+.|+..+.+++.......+.++++...+
T Consensus 286 R~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~-------~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~ 357 (410)
T TIGR00885 286 RFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFA-------GGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYG 357 (410)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc-------CChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Confidence 5889999999999999888888877776666542 12222 223344556666677777778889998876665
Q ss_pred HHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 145 SGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 145 ~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
.+...++. +|++++|++.+.+.+
T Consensus 358 s~~l~~~~-~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 358 AAGLVMAI-IGGGIVPPLQGFIID 380 (410)
T ss_pred HHHHHHHH-hccchHHHHHHHHHH
Confidence 55555544 999999999998876
No 218
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.61 E-value=0.001 Score=67.75 Aligned_cols=126 Identities=10% Similarity=-0.041 Sum_probs=88.1
Q ss_pred hhhhhcc-cCchHHH--HHHHHHHHHHHHHHHHHHhccc--CCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CC
Q 015916 68 AGLASDR-IPAPIIL--LIGSLEGLVGYGAQWLVVSRKI--QPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NR 141 (398)
Q Consensus 68 ~G~l~Dr-~G~r~~~--~~g~~~~~ig~~~~~~~~~~~~--~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~R 141 (398)
..++.|| .+++... .+|.++.+++++.+++...... ...++|.+.+..++.++|-.+..+.......+.-|+ .|
T Consensus 336 ~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~ 415 (475)
T TIGR00924 336 WTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLM 415 (475)
T ss_pred HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHH
Confidence 3456665 4555544 7889998888887765311100 014678788888899999998888888888999986 59
Q ss_pred cchHHHHHhhhhhhHHHHHHHHHhHcCC-ChhHHHHHHHHHHHHHHHhhhhcc
Q 015916 142 GPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVCLGAIFFL 193 (398)
Q Consensus 142 G~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~l 193 (398)
|+.+|+.....++|..+.+.+....... +...++..+++...++.++..+..
T Consensus 416 g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 416 GQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988887765443 334455555555555555544443
No 219
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.56 E-value=0.003 Score=60.69 Aligned_cols=139 Identities=16% Similarity=0.044 Sum_probs=98.3
Q ss_pred cccccccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhc-ccCchHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 015916 28 GNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASD-RIPAPIILLIGSLEGLVGYGAQWLVVSRKIQP 105 (398)
Q Consensus 28 g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~D-r~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~ 105 (398)
...|+.--+.|++-.|-|+|..+.++..+...+..+ .++..-.+.+ +-.+|+.......++.+|++.+.+...
T Consensus 222 ~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~----- 296 (395)
T COG2807 222 LLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPG----- 296 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh-----
Confidence 345666678899999999999999985555555543 4666666666 456777777888888889888876521
Q ss_pred chHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc--CCcchHHHHHhhhhhhHHHHHHHHHhHcCC-ChhHH
Q 015916 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR--NRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKF 174 (398)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~--~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~ 174 (398)
...+ + ..++.|+|.|..+..+...+..-.++ +-+.-+|..++...+=+++.|.+.+.+.+. ++|..
T Consensus 297 ~~~~-l--w~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~ 365 (395)
T COG2807 297 QLPI-L--WALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSA 365 (395)
T ss_pred hHHH-H--HHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHH
Confidence 1121 1 24788999998888888887766653 457777887777777778888888887764 33443
No 220
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.49 E-value=0.0014 Score=65.79 Aligned_cols=158 Identities=21% Similarity=0.231 Sum_probs=107.9
Q ss_pred ccHHHHHHHcCCChhhHHHHHHHHHhhhhhhhhhhhhhcccC-----chHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Q 015916 35 NYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRIP-----APIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G-----~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~ 109 (398)
...+.+++++|++.+|.+.+.....+...+-|+.|.++|.+. ||+=++++.++..++.+.++.... .. .+..
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~-~~--~s~~ 87 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA-SE--SSAA 87 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc-cc--chhh
Confidence 345668999999999999987777777788999999999974 666677777777666665554311 11 2344
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHhh---ccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHH-HHHHHHHHHHH
Q 015916 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNF---RRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKF-LFMLAIVPFVV 185 (398)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~F---p~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~-~~~~~~~~~~i 185 (398)
...++.++..+|....++.+=....|.- |+.||...+.......+|+.+...+.+.+.+....+. +...+..+.+.
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence 4445556677777777777666666555 4457888888888888898888888777766533333 33444555655
Q ss_pred HHhhhhcccc
Q 015916 186 CLGAIFFLRE 195 (398)
Q Consensus 186 ~~~~~~~l~~ 195 (398)
.+...++.+|
T Consensus 168 ~~~~~~~~~e 177 (433)
T PF03092_consen 168 LIVALFLLEE 177 (433)
T ss_pred HHHHHHhhhh
Confidence 5555555554
No 221
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.48 E-value=0.00019 Score=70.73 Aligned_cols=181 Identities=8% Similarity=-0.025 Sum_probs=115.9
Q ss_pred HHHHHHHHHH-HhcccccccccHHHHHHHcCCChhhHHH-----HHHHHH----hhhhh-hhhhhhhhcccCchHHHHHH
Q 015916 16 GFVTAVWVQA-ISGNNYTFSNYSDALKTLMNLTQLELNN-----LSVVKD----IGKAF-GLLAGLASDRIPAPIILLIG 84 (398)
Q Consensus 16 ~l~~~~~~~~-~~g~~~~~s~~~~~l~~~~g~s~~~~~~-----i~~~~~----~~~~~-~~~~G~l~Dr~G~r~~~~~g 84 (398)
.++..+...+ ..-..|..+++...+-+..|+...+-.. ...... ++.+- -++...++|++|||++-+-|
T Consensus 305 ~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~G 384 (538)
T KOG0252|consen 305 HLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMG 384 (538)
T ss_pred HHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhh
Confidence 3444444432 3345688899998888888877654333 111222 22221 24667789999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCchHHHHH-HHHHHHhhhhhhhhhHHHHHHHHhhccC-CcchHHHHHhhhhhhHHHHHHH
Q 015916 85 SLEGLVGYGAQWLVVSRKIQPLSYWQMC-VFLCMGGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGYVGLSTAIFTDL 162 (398)
Q Consensus 85 ~~~~~ig~~~~~~~~~~~~~~~~~~~l~-~~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l 162 (398)
.+++.+-++.++....+......+..++ +..++..+|=+. ......++.||.+ ||+.-|+..+..-.|+.+....
T Consensus 385 F~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~---ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~ 461 (538)
T KOG0252|consen 385 FFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNA---TTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFG 461 (538)
T ss_pred HHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCc---eeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHH
Confidence 9999998888776544222111122233 234444444332 2334578999965 9999999998888888888888
Q ss_pred HHhHcCC-----ChhHHHHHHHHHHHHHHHhhhhcccccCCC
Q 015916 163 CSALFAD-----DPAKFLFMLAIVPFVVCLGAIFFLRETTPA 199 (398)
Q Consensus 163 ~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~ 199 (398)
+....++ ...+..+.+.....++.++..+++||..+.
T Consensus 462 F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~ 503 (538)
T KOG0252|consen 462 FLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGK 503 (538)
T ss_pred hhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeeccccc
Confidence 7777662 234555666666677777777788765544
No 222
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.44 E-value=0.0028 Score=66.79 Aligned_cols=155 Identities=12% Similarity=0.008 Sum_probs=98.7
Q ss_pred ccHHHHHHHcCCChhhHHH-HHHHHHhhhhhhhhhhhhhcc-cCchHHHHHHHHHHHHHHHHHHHHHhcccCC-chHHHH
Q 015916 35 NYSDALKTLMNLTQLELNN-LSVVKDIGKAFGLLAGLASDR-IPAPIILLIGSLEGLVGYGAQWLVVSRKIQP-LSYWQM 111 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~-i~~~~~~~~~~~~~~G~l~Dr-~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~-~~~~~l 111 (398)
++...+.+.+|++.++... +.....+..+.+.++|+++|+ +|+++++.++.++..+|+.++++........ ......
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 3444567789999988877 455544555668899999998 8999999999999999998887531111000 111223
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHhhcc----CCcchHHHHHhhhhhhHHHHHHHHHhHcCC-------ChhHHHHHHHH
Q 015916 112 CVFLCMGGNSTTWMNTAVLVTCIRNFRR----NRGPVSGILKGYVGLSTAIFTDLCSALFAD-------DPAKFLFMLAI 180 (398)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp~----~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-------~~~~~~~~~~~ 180 (398)
+++..+..+|.|..-+.......+-|++ +|-....+...+..+|+.+.+.+...+-+. ..|...+.+..
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~ 168 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPA 168 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHH
Confidence 3445556667776555555667788863 245566666677788888887777665422 13544444444
Q ss_pred HHHHHHHhh
Q 015916 181 VPFVVCLGA 189 (398)
Q Consensus 181 ~~~~i~~~~ 189 (398)
+..+++++.
T Consensus 169 i~m~ia~lv 177 (654)
T TIGR00926 169 ILMILALIV 177 (654)
T ss_pred HHHHHHHHH
Confidence 444444433
No 223
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.37 E-value=2.1e-06 Score=86.21 Aligned_cols=164 Identities=18% Similarity=0.090 Sum_probs=99.3
Q ss_pred ccccHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHH--HHHhcccC-CchH
Q 015916 33 FSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQW--LVVSRKIQ-PLSY 108 (398)
Q Consensus 33 ~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~--~~~~~~~~-~~~~ 108 (398)
...|.+.+.+..+.+.. ........+... ..+.+..+.||+|||++++.+....++..+.++ .......+ ..+.
T Consensus 272 ~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (451)
T PF00083_consen 272 IFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSI 349 (451)
T ss_pred ccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34566667777777766 111122222222 346667999999999999999998888777664 11111000 0022
Q ss_pred HHHHH-HHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcCCCh-hHHHHHHHHHHHHH
Q 015916 109 WQMCV-FLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDP-AKFLFMLAIVPFVV 185 (398)
Q Consensus 109 ~~l~~-~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~i 185 (398)
..+.. .....+.+.+.. ........|.||. .|+++.|+......+++++.+.+...+.+... +..+...+.+..+.
T Consensus 350 ~~i~~~~l~~~~~~~g~~-~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~ 428 (451)
T PF00083_consen 350 LSIVFLALFFAFFSLGWG-PLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIA 428 (451)
T ss_pred ccceeeeecccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHH
Confidence 22221 112222333322 3445677999995 59999999999888998888877766665433 55555555556666
Q ss_pred HHhhhhcccccCCC
Q 015916 186 CLGAIFFLRETTPA 199 (398)
Q Consensus 186 ~~~~~~~l~~~p~~ 199 (398)
.+.+.+++||....
T Consensus 429 ~i~~~~~lpET~g~ 442 (451)
T PF00083_consen 429 IIFVYFFLPETKGK 442 (451)
T ss_pred HhheeEEEeeCCCC
Confidence 66666777776643
No 224
>PRK11462 putative transporter; Provisional
Probab=97.31 E-value=0.0097 Score=60.27 Aligned_cols=108 Identities=17% Similarity=-0.005 Sum_probs=53.3
Q ss_pred HHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHH
Q 015916 52 NNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVL 130 (398)
Q Consensus 52 ~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~ 130 (398)
+.+.....++.+. .++++++.||+|.|++...+..+..+..++..+. . ..+.+.+++..++.|++.+.......
T Consensus 266 ~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~l~g~~~~~~~~l~~ 340 (460)
T PRK11462 266 VAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFV--P---MQASITMFVFIFVIGVLHQLVTPIQW 340 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh--c---hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455444 6889999999999998776655544433333221 1 12232333344455655554433333
Q ss_pred HHHHHhhc------cCC--cchHHHHHhhhhhhHHHHHHHHH
Q 015916 131 VTCIRNFR------RNR--GPVSGILKGYVGLSTAIFTDLCS 164 (398)
Q Consensus 131 ~~~~~~Fp------~~R--G~a~gi~~~~~glg~~i~~~l~~ 164 (398)
.+.++.-+ .+| |...+......-+|.++.+.+.+
T Consensus 341 ~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g 382 (460)
T PRK11462 341 VMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIG 382 (460)
T ss_pred HHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34433322 244 34334433444444444444433
No 225
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.26 E-value=0.0038 Score=53.42 Aligned_cols=98 Identities=12% Similarity=-0.013 Sum_probs=73.5
Q ss_pred hhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc
Q 015916 60 IGKAFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR 139 (398)
Q Consensus 60 ~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~ 139 (398)
...+..++.+.+.+++|+|+.+++|.+.+.+-...... .+.+.++...++.|+|.+...++.-..+.+.-++
T Consensus 49 ~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~--------~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 49 SFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY--------PNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 33444677888999999999999999888754443321 3456777789999999999888877788887765
Q ss_pred -CCcchHHHHHhhhhhhHHHHHHHHHh
Q 015916 140 -NRGPVSGILKGYVGLSTAIFTDLCSA 165 (398)
Q Consensus 140 -~RG~a~gi~~~~~glg~~i~~~l~~~ 165 (398)
+|++-.|+..+....+..+...+...
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999888887766665554433
No 226
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.25 E-value=0.0038 Score=62.60 Aligned_cols=119 Identities=18% Similarity=0.069 Sum_probs=86.4
Q ss_pred cCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhh
Q 015916 44 MNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNST 122 (398)
Q Consensus 44 ~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~ 122 (398)
+|.+..+..........+.+. .++..++.+|+|+|++..++.++..++++++++.. .++.+.+++..++.++|.
T Consensus 267 lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~-----~~~~~l~~~~~~i~~~g~ 341 (467)
T COG2211 267 LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP-----AGSVVLIVVALIIAGVGT 341 (467)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc-----CcchHHHHHHHHHHHHHh
Confidence 455555555555555556565 57899999999999999999999999999998863 145677777888888888
Q ss_pred hhhhhHHHHHHH------Hhhcc-C-CcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 123 TWMNTAVLVTCI------RNFRR-N-RGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 123 g~~~~~~~~~~~------~~Fp~-~-RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
+..+.....+++ ||-.. | -|...|+.....=+|.++...+.+..+
T Consensus 342 ~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 342 GIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred hccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887776676664 45543 3 377777777666677777666655554
No 227
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.16 E-value=0.0019 Score=49.05 Aligned_cols=69 Identities=16% Similarity=0.141 Sum_probs=62.0
Q ss_pred cccccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHH
Q 015916 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLV 98 (398)
Q Consensus 30 ~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~ 98 (398)
.+.|+...|.++++.++|.++.+++.+...+|.++ .+...++.++..+|+.+..+.+...+..+.+++.
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 47788889999999999999999999999999987 5788999999999999999999999998888765
No 228
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.09 E-value=0.014 Score=56.86 Aligned_cols=139 Identities=14% Similarity=0.089 Sum_probs=96.0
Q ss_pred HhcccccccccHHHHHHH-cCCChhhHHHHHHHHHhhhhhh-hhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhccc
Q 015916 26 ISGNNYTFSNYSDALKTL-MNLTQLELNNLSVVKDIGKAFG-LLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKI 103 (398)
Q Consensus 26 ~~g~~~~~s~~~~~l~~~-~g~s~~~~~~i~~~~~~~~~~~-~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~ 103 (398)
-.|.--..+.+.+.+..+ .|.+..+.+...+....+...+ .++-++..|+-+.|.+.+.++...+-++...++
T Consensus 248 YVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~----- 322 (422)
T COG0738 248 YVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALI----- 322 (422)
T ss_pred HHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 345543444555555444 7888888888767666666665 678888889999999988776665555555443
Q ss_pred CCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhH
Q 015916 104 QPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAK 173 (398)
Q Consensus 104 ~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~ 173 (398)
++.+.++ .-++.|..++.+++.......+..|++-..+.++..+ ...|+++.|++.+.+.+..+..
T Consensus 323 --~g~v~~~-~l~~ig~F~simfPTIfslal~~l~~~ts~~s~~l~m-aivGGAiiP~l~G~i~d~~g~~ 388 (422)
T COG0738 323 --GGVVALY-ALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGLLVM-AIVGGAIIPPLQGVIADMFGIQ 388 (422)
T ss_pred --cChHHHH-HHHHHHHHhHHHHHHHHHHHHhccCccccccceeeee-heecchHHHHHHHHHHHhhhhH
Confidence 2333333 2345677788888888888889999666666666544 4689999999999887754433
No 229
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.08 E-value=0.0051 Score=62.26 Aligned_cols=158 Identities=18% Similarity=0.139 Sum_probs=95.7
Q ss_pred cccccccHHHH-HHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCc---------hHHHHHHHHHHHHHHHHHHHH
Q 015916 30 NYTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPA---------PIILLIGSLEGLVGYGAQWLV 98 (398)
Q Consensus 30 ~~~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~---------r~~~~~g~~~~~ig~~~~~~~ 98 (398)
.+.+-.|.|.+ ++-+|++-.+.++++..-.+.+. +.+++|.++||.-. |..-.++....++.++.+++.
T Consensus 274 ~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~ 353 (466)
T KOG2532|consen 274 FYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT 353 (466)
T ss_pred HHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec
Confidence 35556678875 77899999999998776666665 58999999999865 222223333333333333332
Q ss_pred HhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHh-hccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCC---hhHH
Q 015916 99 VSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRN-FRRNRGPVSGILKGYVGLSTAIFTDLCSALFADD---PAKF 174 (398)
Q Consensus 99 ~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~-Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~---~~~~ 174 (398)
+.. +....+....+ +.+............... -|++-+.++|+.+....+.+.+.|.+.+.+.+++ .|+.
T Consensus 354 --~~~--~~~~a~~~l~~--~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~ 427 (466)
T KOG2532|consen 354 --SDE--HRLLAVILLTI--AIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRI 427 (466)
T ss_pred --CCC--cchHHHHHHHH--HHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHH
Confidence 111 12112221111 112211222233333434 6888999999999999999999999999988543 5777
Q ss_pred HHHHHHHHHHHHHhhhhcc
Q 015916 175 LFMLAIVPFVVCLGAIFFL 193 (398)
Q Consensus 175 ~~~~~~~~~~i~~~~~~~l 193 (398)
.+++..+..+++-+...+.
T Consensus 428 VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 428 VFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHhchheeEe
Confidence 7766665555554444333
No 230
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.07 E-value=0.003 Score=64.23 Aligned_cols=135 Identities=19% Similarity=0.093 Sum_probs=85.7
Q ss_pred cccccccccHHHHHHH-cCCChhhHHHHHHHHHhhhhh-hhhhhhhhcc----cCchHHHHHHHHHHH-HHHHHHHHHHh
Q 015916 28 GNNYTFSNYSDALKTL-MNLTQLELNNLSVVKDIGKAF-GLLAGLASDR----IPAPIILLIGSLEGL-VGYGAQWLVVS 100 (398)
Q Consensus 28 g~~~~~s~~~~~l~~~-~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr----~G~r~~~~~g~~~~~-ig~~~~~~~~~ 100 (398)
...|+++.+.|.+-++ .|+|..+.+.+++...++.++ .+++|.+.|| +.+|........++. +|+..+...
T Consensus 287 lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~-- 364 (495)
T KOG2533|consen 287 LVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAA-- 364 (495)
T ss_pred hccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 4568888898887665 679999999998888888876 7899999999 666666666555554 343443321
Q ss_pred cccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc--CCcchHHHHHhhhhhhHHHHHHHHHhHcCC
Q 015916 101 RKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR--NRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (398)
Q Consensus 101 ~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~--~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 169 (398)
......+.+.+....+.+.....+..-....... ||-...+....+.+.++.+.+++......+
T Consensus 365 -----~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap 430 (495)
T KOG2533|consen 365 -----AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAP 430 (495)
T ss_pred -----ccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCc
Confidence 1122222222222233333333444445555542 466666777777888888888887776554
No 231
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.94 E-value=0.003 Score=63.54 Aligned_cols=116 Identities=11% Similarity=0.104 Sum_probs=87.9
Q ss_pred hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccC-Ccc
Q 015916 65 GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRN-RGP 143 (398)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~ 143 (398)
-++.+++++++|+-+++.+|...+.+=++..++. .|.|...-.-++.|+..++.+.+...+++..-|++ |..
T Consensus 423 ~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L-------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at 495 (618)
T KOG3762|consen 423 YFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL-------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRAT 495 (618)
T ss_pred HHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh-------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHH
Confidence 4788999999999999999999998888877765 56787777899999999999999999999999865 999
Q ss_pred hHHHHHhh-hhhhHHHHHHHHHhHcCCCh-hHHHHHHHHHHHHHHH
Q 015916 144 VSGILKGY-VGLSTAIFTDLCSALFADDP-AKFLFMLAIVPFVVCL 187 (398)
Q Consensus 144 a~gi~~~~-~glg~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~ 187 (398)
+.|++.+. .|+|-.+.+.+.+.+++.-+ ...+...++.+.+.++
T Consensus 496 ~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 496 AQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLA 541 (618)
T ss_pred HHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHH
Confidence 99998865 46666666666666665433 3344444443333333
No 232
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.91 E-value=0.0044 Score=65.04 Aligned_cols=131 Identities=18% Similarity=0.049 Sum_probs=94.6
Q ss_pred ccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHH--Hhc----------
Q 015916 35 NYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLV--VSR---------- 101 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~--~~~---------- 101 (398)
....++++.|+++.++.+++.....++..+ ..+..++.-|.-|-+.+-+|.+++++|.++.++- ..+
T Consensus 118 s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~ 197 (735)
T KOG3626|consen 118 SVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIK 197 (735)
T ss_pred hhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhh
Confidence 345678999999999999998889999865 6788999999999999999999999999988752 000
Q ss_pred -----c---------------------c-----CCch-HHHH-HHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHH
Q 015916 102 -----K---------------------I-----QPLS-YWQM-CVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGI 147 (398)
Q Consensus 102 -----~---------------------~-----~~~~-~~~l-~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi 147 (398)
. . .+++ .|.+ ++..++.|+|..-.++....++=++-.+ +-..-+|+
T Consensus 198 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi 277 (735)
T KOG3626|consen 198 QSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGI 277 (735)
T ss_pred ccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHH
Confidence 0 0 0011 3433 3467888888877777777777777664 46777888
Q ss_pred HHhhhhhhHHHHHHHHHh
Q 015916 148 LKGYVGLSTAIFTDLCSA 165 (398)
Q Consensus 148 ~~~~~glg~~i~~~l~~~ 165 (398)
.....-+|.+++-.+.+.
T Consensus 278 ~~~~~~lGPaiGfllgS~ 295 (735)
T KOG3626|consen 278 LYSMAILGPAIGFLLGSF 295 (735)
T ss_pred HHHHHHhhhHHHHHHHHH
Confidence 877766666655444443
No 233
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.81 E-value=0.053 Score=55.68 Aligned_cols=132 Identities=11% Similarity=0.068 Sum_probs=91.4
Q ss_pred hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcc
Q 015916 65 GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGP 143 (398)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~ 143 (398)
....+...||+|||.....+.++..++++..+..... ...+...+...+...+.+..+.......++.+|. .|..
T Consensus 367 ~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~ 442 (521)
T KOG0255|consen 367 YFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDD----LGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNT 442 (521)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhcc----chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 3556899999999999999999999999988876322 1111233334444445555555667888999996 5999
Q ss_pred hHHHHHhhhhhhHHHHHHHHHhHcCC-ChhHHHHHHHHHHHHHHHhhhhcccccCCCCC
Q 015916 144 VSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVCLGAIFFLRETTPAST 201 (398)
Q Consensus 144 a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~~ 201 (398)
+.+...+...+|+.+.+.+....... ....... .+....+.++++.+++|++.....
T Consensus 443 ~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~lpet~~~~l 500 (521)
T KOG0255|consen 443 AVGAISAAARLGSILAPLFPLLLRQMFPLLGLIL-FGWLALLLGLLSLLLLPETKGKPL 500 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHH-HHHHHHHHHHHHHhcCcccCCCCC
Confidence 99999999889888887766433221 1122222 566777777777788888876544
No 234
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.72 E-value=0.39 Score=48.67 Aligned_cols=151 Identities=9% Similarity=-0.060 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHhcccccccccHHHHHHHcCCCh-----hhHHHHHHHHHhhh-hh-hhhhhhhhcccCchHHHHHHHH
Q 015916 14 WLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQ-----LELNNLSVVKDIGK-AF-GLLAGLASDRIPAPIILLIGSL 86 (398)
Q Consensus 14 w~~l~~~~~~~~~~g~~~~~s~~~~~l~~~~g~s~-----~~~~~i~~~~~~~~-~~-~~~~G~l~Dr~G~r~~~~~g~~ 86 (398)
+..++...+++++....|. ..-++++.+..+. ..+.++-+...+.+ +. .++.+++.+|+++++++-+-..
T Consensus 6 ~~k~~~~~l~fF~il~~Y~---iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYT---ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 3334444444444444442 3456888887743 45677655554544 33 6899999999999999888777
Q ss_pred HHHHHHHHHHHHHhcccCC--c----------------------hHHHHHHHHHHHhhhhhhhhh-HHHHHHHHhhc-cC
Q 015916 87 EGLVGYGAQWLVVSRKIQP--L----------------------SYWQMCVFLCMGGNSTTWMNT-AVLVTCIRNFR-RN 140 (398)
Q Consensus 87 ~~~ig~~~~~~~~~~~~~~--~----------------------~~~~l~~~~~l~G~g~g~~~~-~~~~~~~~~Fp-~~ 140 (398)
.+..-++++++......+. + +.|...++.+..-+-...... .-+..+++.+. ++
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 7776666666543211000 0 123333333333332222222 45677888886 45
Q ss_pred CcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 141 RGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 141 RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
-.+-.++...+..+|..+.+.+...+.
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567777877777788777776665543
No 235
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.68 E-value=0.058 Score=54.79 Aligned_cols=134 Identities=13% Similarity=0.016 Sum_probs=85.5
Q ss_pred hhhhhhhhcccCc-hHHHHHHHHHHHHHHHHHHHHHh--c---c--------cCCch-HHHHHHHHHHHhhhhhhhhhHH
Q 015916 65 GLLAGLASDRIPA-PIILLIGSLEGLVGYGAQWLVVS--R---K--------IQPLS-YWQMCVFLCMGGNSTTWMNTAV 129 (398)
Q Consensus 65 ~~~~G~l~Dr~G~-r~~~~~g~~~~~ig~~~~~~~~~--~---~--------~~~~~-~~~l~~~~~l~G~g~g~~~~~~ 129 (398)
+++--++.+|+|+ |++-.++.++.+++.....+.-. + . .+... .+...+...+.|+..+..+..+
T Consensus 322 s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siP 401 (477)
T TIGR01301 322 SIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIP 401 (477)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHh
Confidence 5566778999996 56668888888888777654311 0 0 00000 2344445667788888888899
Q ss_pred HHHHHHhhcc---CCcchHHHHHhhhhhhHHHHHHHHHhHcC--CChhHHHHHHHHHHHHHH-HhhhhcccccCC
Q 015916 130 LVTCIRNFRR---NRGPVSGILKGYVGLSTAIFTDLCSALFA--DDPAKFLFMLAIVPFVVC-LGAIFFLRETTP 198 (398)
Q Consensus 130 ~~~~~~~Fp~---~RG~a~gi~~~~~glg~~i~~~l~~~~~~--~~~~~~~~~~~~~~~~i~-~~~~~~l~~~p~ 198 (398)
...+++.-|+ +.|.-+|+.+.+.-+...+.+...+.+.+ ++.....+.++.+.++++ +.+.+.+|.++.
T Consensus 402 fal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 402 FALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999998883 45999999999988887777765554332 123344555555555444 444455555553
No 236
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.61 E-value=0.0071 Score=45.18 Aligned_cols=53 Identities=19% Similarity=0.255 Sum_probs=42.1
Q ss_pred cHHHHHHHcCCChhhHHHHHHHHHhhhh-hhhhhhhhhcccCchHHHHHHHHHH
Q 015916 36 YSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEG 88 (398)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (398)
|.+-..++.|+|..|++.+.....+... ..|+.|+++||+|+++.++.+..++
T Consensus 22 fl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 22 FLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 4444556799999999997766666665 4799999999999999988876554
No 237
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.52 E-value=0.01 Score=59.90 Aligned_cols=125 Identities=20% Similarity=0.231 Sum_probs=86.1
Q ss_pred hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCC
Q 015916 63 AFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNR 141 (398)
Q Consensus 63 ~~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~R 141 (398)
..++..|.+.||+|||..+....+...+.-+...+. .+|.+.+..+..|. +..+......+++.-. ++|
T Consensus 77 i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~--------~~~~~~~~~l~g~~--~~~~s~~~a~vadis~~~~R 146 (463)
T KOG2816|consen 77 ISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ--------GYWFFLLLGLSGGF--SAIFSVGFAYVADISSEEER 146 (463)
T ss_pred HHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH--------HHHHhhhcccccch--hhhhhhhhhheeeccchhHH
Confidence 447999999999999999999988888877766542 23333322222221 2233455666777776 469
Q ss_pred cchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhh-cccccC
Q 015916 142 GPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIF-FLRETT 197 (398)
Q Consensus 142 G~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~l~~~p 197 (398)
....|++.+.++++..+.+.+.+...+..+....+.++....++.++... ++||+-
T Consensus 147 ~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl 203 (463)
T KOG2816|consen 147 SSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESL 203 (463)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccccc
Confidence 99999999999999999999988877765555566666666555555443 555543
No 238
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.30 E-value=0.017 Score=59.93 Aligned_cols=148 Identities=17% Similarity=0.163 Sum_probs=92.9
Q ss_pred HHHHHHHHHHhcc-cccccccHHHH-HHHcCCCh---hhHHHHHHHHHhhhhh-hhhhhhhhcccCch-HHHHHHHHHHH
Q 015916 17 FVTAVWVQAISGN-NYTFSNYSDAL-KTLMNLTQ---LELNNLSVVKDIGKAF-GLLAGLASDRIPAP-IILLIGSLEGL 89 (398)
Q Consensus 17 l~~~~~~~~~~g~-~~~~s~~~~~l-~~~~g~s~---~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r-~~~~~g~~~~~ 89 (398)
+.+.+++.+..|. .|+...+-|+. ..-|+-+. .+.++.+....++... +++.|.+..++++- ..++++.+++.
T Consensus 312 ~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~t 391 (599)
T PF06609_consen 312 FAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMT 391 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHH
Confidence 3333334444454 35555555654 33454443 2456666666666654 56778887766554 45567776766
Q ss_pred HHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 90 VGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 90 ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
++...++.. . . ++......+.++.|+|.|....++...++-..|+ +-|++.|+..+...+|++++..++..++.
T Consensus 392 a~~Gama~~-~--~--~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 392 AFCGAMAAV-R--P--DNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred HHHHHHHHc-c--C--CCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 655554432 1 1 1223334567788888887766666555555675 58999999999999999999999888775
Q ss_pred C
Q 015916 169 D 169 (398)
Q Consensus 169 ~ 169 (398)
+
T Consensus 467 n 467 (599)
T PF06609_consen 467 N 467 (599)
T ss_pred h
Confidence 4
No 239
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.24 E-value=0.049 Score=55.09 Aligned_cols=121 Identities=22% Similarity=0.245 Sum_probs=93.2
Q ss_pred HHHHcCCChhhHHHH-HHHHHhhhhhhh-hhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHH
Q 015916 40 LKTLMNLTQLELNNL-SVVKDIGKAFGL-LAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCM 117 (398)
Q Consensus 40 l~~~~g~s~~~~~~i-~~~~~~~~~~~~-~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l 117 (398)
++..++|+..+.+.+ +....++..... ..+.+...+|-|+++.+|.+...++.+..++. ++.|+.+...++
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~-------~~~w~~~~~~v~ 340 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA-------TETWMMFAAGVV 340 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh-------ccchhhhHHHHH
Confidence 677899999999975 444444444444 45578888999999999999999999988875 567888877766
Q ss_pred HhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 118 GGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 118 ~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
.++.. ...++..+..+++-+ ++||++.++.....++.+.+.+.+++.++.
T Consensus 341 ~~~~~-~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 341 VALAG-IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHhhc-chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 65443 344555666777775 679999999999999999999998887653
No 240
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.16 E-value=0.026 Score=55.08 Aligned_cols=128 Identities=19% Similarity=0.057 Sum_probs=84.4
Q ss_pred HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccC--chHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHH
Q 015916 40 LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIP--APIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLC 116 (398)
Q Consensus 40 l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G--~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~ 116 (398)
+.+.+..+.-+++.......+...+ ..+.|.+.||++ +......|.++.+......-++ +++.++.+-+.
T Consensus 297 m~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~-------~~~~~L~vp~~ 369 (464)
T KOG3764|consen 297 MLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFA-------TSIAQLWVPNF 369 (464)
T ss_pred HHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhh-------hhHHHHhhhhH
Confidence 4667775555777755555556655 689999999999 6555555555555443333333 45677776555
Q ss_pred HHhhhhhhhhhHHHHHHHHhhc-c------CCcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHH
Q 015916 117 MGGNSTTWMNTAVLVTCIRNFR-R------NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKF 174 (398)
Q Consensus 117 l~G~g~g~~~~~~~~~~~~~Fp-~------~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~ 174 (398)
..|++.+..+..-..+...... + --|...++....+++|.++.|.+.+.+.+.-+..|
T Consensus 370 ~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~w 434 (464)
T KOG3764|consen 370 GLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEW 434 (464)
T ss_pred HHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHH
Confidence 5566666665544444444443 2 24899999999999999999999888877644333
No 241
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.15 E-value=0.11 Score=52.96 Aligned_cols=116 Identities=11% Similarity=0.052 Sum_probs=76.3
Q ss_pred HHHHHHHHHhhhh-hhhhhhhhhcccCc--h----H-HHHHHHHHHHHHHHHHHHHHhcccC--CchHHHHHHHHHHHhh
Q 015916 51 LNNLSVVKDIGKA-FGLLAGLASDRIPA--P----I-ILLIGSLEGLVGYGAQWLVVSRKIQ--PLSYWQMCVFLCMGGN 120 (398)
Q Consensus 51 ~~~i~~~~~~~~~-~~~~~G~l~Dr~G~--r----~-~~~~g~~~~~ig~~~~~~~~~~~~~--~~~~~~l~~~~~l~G~ 120 (398)
.+|+.+...+..+ ++|+.+++-.|..+ | + =+.+|.++.+++++.+.+......+ ..+.+.+.+..++..+
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 3444444545443 36776666555422 1 1 2678889999999888654332111 1355666777788888
Q ss_pred hhhhhhhHHHHHHHHhhccC-CcchHHHHHhhh-hhhHHHHHHHHHhH
Q 015916 121 STTWMNTAVLVTCIRNFRRN-RGPVSGILKGYV-GLSTAIFTDLCSAL 166 (398)
Q Consensus 121 g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~-glg~~i~~~l~~~~ 166 (398)
|--+..+.....+++.-|+| ||+.+|+..... .+|..+...+.+..
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88878888899999999976 999999986633 46666666655543
No 242
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.04 E-value=0.12 Score=50.74 Aligned_cols=122 Identities=19% Similarity=0.193 Sum_probs=91.0
Q ss_pred HHHcCCChhhHHHHHHHHHhhhhhh-hhhhhhhc-ccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Q 015916 41 KTLMNLTQLELNNLSVVKDIGKAFG-LLAGLASD-RIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (398)
Q Consensus 41 ~~~~g~s~~~~~~i~~~~~~~~~~~-~~~G~l~D-r~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (398)
-+-||.|.+|..-++.....|.+.+ ...|++.. |.+++++..+|+....+++.+..++ +.. .+.+.+...-++.
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a--~~~--~~~~~~~~~~~l~ 311 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILA--GPL--GSPWLFRPGVFLL 311 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHH--Hhc--ccchHHHHHHHHH
Confidence 4678999999888888777888764 46777655 8999999999999998888776554 211 3466777788899
Q ss_pred hhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHHhH
Q 015916 119 GNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSAL 166 (398)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~ 166 (398)
|+|.|...+.+...+.+.-+ ++.|+.+|..-+...++..+...+....
T Consensus 312 G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~ 360 (403)
T PF03209_consen 312 GLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGAL 360 (403)
T ss_pred HHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888888887775 4679888887766655555554444443
No 243
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.89 E-value=2.5 Score=42.45 Aligned_cols=72 Identities=15% Similarity=0.073 Sum_probs=51.8
Q ss_pred hHHHHhccHhHHHHHHHHHhcccceeeeeechHHHHHHhCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 324 TIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 324 t~~~~l~t~~Fw~l~~~~~~~~~~g~~~~~n~~~i~~~~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
.+++..|++-|.-- ++..+.....+.+-+.+..++.+.|+++ .+..=++-++....|-++..++.+|+|..+
T Consensus 251 ~w~~Y~~q~vflas-~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr 324 (432)
T PF06963_consen 251 GWRTYFRQPVFLAS-FALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVR 324 (432)
T ss_pred cHHHHHhCHHHHHH-HHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 35667777755533 3344444445566777888899999986 456778888889999999999999988654
No 244
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.52 E-value=0.032 Score=51.67 Aligned_cols=96 Identities=16% Similarity=0.140 Sum_probs=63.7
Q ss_pred HHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhh
Q 015916 42 TLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGN 120 (398)
Q Consensus 42 ~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 120 (398)
++++....|++-+..++.-.. +++.+.|-+.|+-|||+.. +.+++.|.+...+-. ++.+-.+.++|++.|+
T Consensus 65 stYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKrac----vtycitYiLsCiTKh----SpqYkVLmVGR~LGGi 136 (454)
T KOG4332|consen 65 STYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC----VTYCITYILSCITKH----SPQYKVLMVGRVLGGI 136 (454)
T ss_pred hhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccce----eeehHHHHHHHHhhc----CCceEEEeehhhhhhH
Confidence 678888888887555543333 5689999999999999864 456666766665421 2456677889999999
Q ss_pred hhhhhhhHHHHHHHHhhccCCcchH
Q 015916 121 STTWMNTAVLVTCIRNFRRNRGPVS 145 (398)
Q Consensus 121 g~g~~~~~~~~~~~~~Fp~~RG~a~ 145 (398)
.+.+.+.+--.....--.+|||.-.
T Consensus 137 aTsLLFSaFEsWliaEHnekr~Feq 161 (454)
T KOG4332|consen 137 ATSLLFSAFESWLIAEHNEKRGFEQ 161 (454)
T ss_pred HHHHHHHHHHHHHHHHhhhccCChH
Confidence 9988765433222211124566543
No 245
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.39 E-value=1.1 Score=45.01 Aligned_cols=127 Identities=13% Similarity=0.001 Sum_probs=80.9
Q ss_pred cccccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhccc-C--Cch
Q 015916 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKI-Q--PLS 107 (398)
Q Consensus 32 ~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~-~--~~~ 107 (398)
+|+.....+...-|++...++.+-....+..+. .+.+.++.+|+|..+.-+++.........+....+.... + ..+
T Consensus 276 sf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s 355 (432)
T PF06963_consen 276 SFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSIS 355 (432)
T ss_pred cCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhH
Confidence 344333334344499999999875555555554 689999999999999999998876655444433322111 1 012
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHH
Q 015916 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAI 158 (398)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i 158 (398)
...+..+-++.=+|.=..+.+....++++-|+ +||...|.-.+...+-..+
T Consensus 356 ~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll 407 (432)
T PF06963_consen 356 AYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELL 407 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHH
Confidence 22222223333344444567788889999985 7999999998877665444
No 246
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.33 E-value=0.54 Score=46.54 Aligned_cols=122 Identities=16% Similarity=0.152 Sum_probs=81.2
Q ss_pred hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcch
Q 015916 65 GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPV 144 (398)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a 144 (398)
-+.+-++.+|...+.=+.+..++..+|.++.+++ ++.+.-.++-++.+++.|++-.....+ ...|++ .+
T Consensus 76 Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~-------~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y~~---~~ 144 (402)
T PF02487_consen 76 KLIAPFFIHRVPYWIRILICVALSAAGMLLVAFS-------PSVWVRLLGVVLASLSSGLGEVTFLSL-THFYGK---SS 144 (402)
T ss_pred HHHhHhhhhhccchHHHHHHHHHHHHHHhheeec-------cchhHHHHHHHHHhhhhhhhHHHHHHH-HHhcCc---cc
Confidence 5677788898876666667777888888887664 456555566778888888877655554 556665 24
Q ss_pred HHHHHhhhhhhHHHHHHHHHhHcC--CChhHHHHHHHHHHHHHHHhhhhcccccC
Q 015916 145 SGILKGYVGLSTAIFTDLCSALFA--DDPAKFLFMLAIVPFVVCLGAIFFLRETT 197 (398)
Q Consensus 145 ~gi~~~~~glg~~i~~~l~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~l~~~p 197 (398)
++-..+|.|.++.+.+..+..+.. -..+..++.....|.+..+...+.++.++
T Consensus 145 l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~ 199 (402)
T PF02487_consen 145 LSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPP 199 (402)
T ss_pred cccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 556667778777777766554443 23455566666667666666666666544
No 247
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.01 E-value=0.23 Score=49.94 Aligned_cols=99 Identities=12% Similarity=-0.115 Sum_probs=75.3
Q ss_pred HHHhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHh
Q 015916 57 VKDIGKAFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRN 136 (398)
Q Consensus 57 ~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~ 136 (398)
........+++++.+.|+.|+|..+.+|+..+..-.+.+.+ .|-+.++....+.|+|.++.+..--.+..++
T Consensus 59 iY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~--------~N~y~~yfssallG~Gaallw~GqG~ylt~~ 130 (461)
T KOG3098|consen 59 IYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF--------PNSYYLYFSSALLGFGAALLWTGQGGYLTSN 130 (461)
T ss_pred HHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh--------cchHHHHHHHHHhhhhHHheecccceehhhc
Confidence 33344455789999999999999999999888766555443 3556677788999999998888777888999
Q ss_pred hcc-CCcchHHHHHhhhhhhHHHHHHHH
Q 015916 137 FRR-NRGPVSGILKGYVGLSTAIFTDLC 163 (398)
Q Consensus 137 Fp~-~RG~a~gi~~~~~glg~~i~~~l~ 163 (398)
.++ ++.+-+++..+..-.+..+++.+.
T Consensus 131 st~~tie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 131 STRETIERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhhhHhh
Confidence 875 588888888887766655554443
No 248
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.99 E-value=3 Score=42.10 Aligned_cols=107 Identities=18% Similarity=0.203 Sum_probs=76.6
Q ss_pred HHHHHhhhhh-hhhhhhh---hcccCchHHHHHHHHHHHHHHHHHHHHHhcccC-----------CchHHHHHHHHHHHh
Q 015916 55 SVVKDIGKAF-GLLAGLA---SDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQ-----------PLSYWQMCVFLCMGG 119 (398)
Q Consensus 55 ~~~~~~~~~~-~~~~G~l---~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~-----------~~~~~~l~~~~~l~G 119 (398)
.....++.+. +...+.+ .+|+|+++++.++..+..+++++.....-...+ .+++....+..++.|
T Consensus 285 ~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G 364 (461)
T KOG3098|consen 285 SIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLG 364 (461)
T ss_pred HHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHh
Confidence 3333444443 4555544 577999999999999999988887654221110 113344455778899
Q ss_pred hhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHH
Q 015916 120 NSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTD 161 (398)
Q Consensus 120 ~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~ 161 (398)
++.+...+.....++..+|++|..+..+.....++++.+...
T Consensus 365 ~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f 406 (461)
T KOG3098|consen 365 FGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFF 406 (461)
T ss_pred hHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhh
Confidence 999988888888899999999999999999988888766433
No 249
>PTZ00207 hypothetical protein; Provisional
Probab=92.96 E-value=1.8 Score=45.29 Aligned_cols=124 Identities=10% Similarity=0.007 Sum_probs=80.8
Q ss_pred HHHHHHc-CC-Chhh-----HHHHHHHHHhhhhh-hhhhhhhhccc----CchHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 015916 38 DALKTLM-NL-TQLE-----LNNLSVVKDIGKAF-GLLAGLASDRI----PAPIILLIGSLEGLVGYGAQWLVVSRKIQP 105 (398)
Q Consensus 38 ~~l~~~~-g~-s~~~-----~~~i~~~~~~~~~~-~~~~G~l~Dr~----G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~ 105 (398)
.++-+.+ |. ++.+ +++++....+|-+. +.+.=++..|. =||+..+....++.++.+++++..
T Consensus 377 ~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~~------ 450 (591)
T PTZ00207 377 RFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLTL------ 450 (591)
T ss_pred HHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHC------
Confidence 5566667 66 2231 23345555555543 44442222222 255555555555778888877641
Q ss_pred chHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHH-HHHHhHcC
Q 015916 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFT-DLCSALFA 168 (398)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~-~l~~~~~~ 168 (398)
+ -..+++..++.|++.|........+..+.|-|+-|+---+......+|+.+++ .+++.+++
T Consensus 451 p-~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd 513 (591)
T PTZ00207 451 P-KAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLNRLLYGEWYT 513 (591)
T ss_pred C-ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 1 13577888999999998888888889999997789999998888888888884 44554543
No 250
>PRK03612 spermidine synthase; Provisional
Probab=92.92 E-value=4.2 Score=41.92 Aligned_cols=33 Identities=9% Similarity=0.033 Sum_probs=19.8
Q ss_pred HHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhh
Q 015916 40 LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLAS 72 (398)
Q Consensus 40 l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~ 72 (398)
+.-.+|-+..+.+.+...+..|..+ +.++|++.
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~ 74 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLL 74 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3445677777766655555555544 56666665
No 251
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=92.74 E-value=0.33 Score=47.36 Aligned_cols=119 Identities=15% Similarity=0.078 Sum_probs=78.9
Q ss_pred HHcCCChhhHHHH-HHHHHhhhhhhhhhhhhhcccC--chHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Q 015916 42 TLMNLTQLELNNL-SVVKDIGKAFGLLAGLASDRIP--APIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (398)
Q Consensus 42 ~~~g~s~~~~~~i-~~~~~~~~~~~~~~G~l~Dr~G--~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (398)
..+|++..|.+-+ ...+..+..++....+..||.. .+-.+..+..++.-.++..+.. .....+++...+-
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~-------~~~~~l~~~s~l~ 362 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA-------RTPVVLYLGSTLK 362 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc-------ccchhhhHHHHHH
Confidence 5689999999884 4444444456888888889877 5656655555555444444332 2234455555555
Q ss_pred hhhhhhhhhHHHHHHHHhhcc-CCcchHHHHHhhhhhhHHHHHHHHHhHc
Q 015916 119 GNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (398)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 167 (398)
.+......+.-...+.+.-|+ +||.++|+..+...++=++.|.+.+..+
T Consensus 363 sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~ 412 (451)
T KOG2615|consen 363 SFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIF 412 (451)
T ss_pred HHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeE
Confidence 555555544445556677785 6999999999988888888888775554
No 252
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=92.73 E-value=0.53 Score=46.08 Aligned_cols=117 Identities=11% Similarity=0.036 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccC--CchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccC----CcchHHHHHhhh
Q 015916 79 IILLIGSLEGLVGYGAQWLVVSRKIQ--PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRN----RGPVSGILKGYV 152 (398)
Q Consensus 79 ~~~~~g~~~~~ig~~~~~~~~~~~~~--~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~----RG~a~gi~~~~~ 152 (398)
+++++|.+++.+|++++.++...... +.+.+.++++..+.++|.|..=+......++.|+++ |-........+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 67899999999999997665332111 112356677777888999987666777788999753 344555566777
Q ss_pred hhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHhhhhcccc
Q 015916 153 GLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLRE 195 (398)
Q Consensus 153 glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~ 195 (398)
.+|+.+...+...+-++..|.+.+.++.+..+++++..+.-++
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~ 124 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRK 124 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCc
Confidence 8888887777666666667877777777777766666655543
No 253
>PF12832 MFS_1_like: MFS_1 like family
Probab=91.48 E-value=0.2 Score=37.28 Aligned_cols=47 Identities=15% Similarity=0.186 Sum_probs=39.5
Q ss_pred eeechHHHHHHhCCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhHhc
Q 015916 351 VMNNMGQIGLALGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKMVH 397 (398)
Q Consensus 351 ~~~n~~~i~~~~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~~~ 397 (398)
+...++-..+++|++ +.....++.-+...++..++|++.||+++++.
T Consensus 19 ~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 19 LYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred HHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 345666778889997 46778899999999999999999999998763
No 254
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=90.85 E-value=5.6 Score=40.07 Aligned_cols=93 Identities=16% Similarity=0.056 Sum_probs=44.3
Q ss_pred hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccC-CchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcc
Q 015916 65 GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQ-PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGP 143 (398)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~ 143 (398)
.+..-.+..|+..|.=+..+.++..+..++.........+ ...++..++..++.|++.+.... +.-..+..||++
T Consensus 62 ~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~-s~~gla~~fp~~--- 137 (437)
T TIGR00939 62 NSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQG-SLFGLAGVFPST--- 137 (437)
T ss_pred HHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcc-cchhhcccCCHH---
Confidence 4555566667665333333433333222222111111111 12344444556677777776543 344466678854
Q ss_pred hHHHHHhhhhhhHHHHHH
Q 015916 144 VSGILKGYVGLSTAIFTD 161 (398)
Q Consensus 144 a~gi~~~~~glg~~i~~~ 161 (398)
-++....|.|+++.+.+.
T Consensus 138 ~~~a~~~G~g~aGv~~s~ 155 (437)
T TIGR00939 138 YSSAVMSGQGLAGVLTSL 155 (437)
T ss_pred HHHHHHhcchhHHHHHHH
Confidence 334445566666665443
No 255
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=90.84 E-value=0.75 Score=48.64 Aligned_cols=66 Identities=11% Similarity=0.115 Sum_probs=46.7
Q ss_pred ccccccccHHHH-HHHcCCChhhHHHHHHHHHh-hhhh-hhhhhhhhcccC--chHHHHHHHHHHHHHHHH
Q 015916 29 NNYTFSNYSDAL-KTLMNLTQLELNNLSVVKDI-GKAF-GLLAGLASDRIP--APIILLIGSLEGLVGYGA 94 (398)
Q Consensus 29 ~~~~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~-~~~~-~~~~G~l~Dr~G--~r~~~~~g~~~~~ig~~~ 94 (398)
..+.+..+.|.+ ++++|++..+.+++.....+ +..+ .+++|++.||++ .|+++..+.++..++.+.
T Consensus 345 ~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 345 AFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 345556677764 67899999999986554444 4444 689999999998 566777776666666544
No 256
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=90.03 E-value=0.91 Score=45.62 Aligned_cols=152 Identities=19% Similarity=0.198 Sum_probs=92.9
Q ss_pred cCCChhhHHHHHHHHHhhhhhh-hhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhc-----ccCCchHHHHHHHHHH
Q 015916 44 MNLTQLELNNLSVVKDIGKAFG-LLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSR-----KIQPLSYWQMCVFLCM 117 (398)
Q Consensus 44 ~g~s~~~~~~i~~~~~~~~~~~-~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~-----~~~~~~~~~l~~~~~l 117 (398)
.|+++...+.+...+.++.+.+ .+..+..-+..-|+++....++..+..+.-...+.+ .+++ .+..+.-.++
T Consensus 250 p~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d--~~f~lgd~~l 327 (433)
T PF03092_consen 250 PHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPD--QWFALGDTIL 327 (433)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCC--eEEEEEhHHH
Confidence 3477777777666666666553 566666667788888887777666544432211111 1111 1111223455
Q ss_pred HhhhhhhhhhHHHHHHHHhhccC-CcchHHHHHhhhhhhHHHHHHHHHhHcCC------C--hhHHHHHHHHHHHHHHHh
Q 015916 118 GGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGYVGLSTAIFTDLCSALFAD------D--PAKFLFMLAIVPFVVCLG 188 (398)
Q Consensus 118 ~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~~~~------~--~~~~~~~~~~~~~~i~~~ 188 (398)
..+-..+.+.+....++|..|+. .|+..++..+...+|..+...+...+.+. + .-.++.+++.+..++.+.
T Consensus 328 ~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ 407 (433)
T PF03092_consen 328 EEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLP 407 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence 55555666778888999999975 89999999999999988877776665431 1 123444444444455555
Q ss_pred hhhcccccC
Q 015916 189 AIFFLRETT 197 (398)
Q Consensus 189 ~~~~l~~~p 197 (398)
...++++..
T Consensus 408 ll~lLp~~~ 416 (433)
T PF03092_consen 408 LLFLLPPQK 416 (433)
T ss_pred HHHHcCCCc
Confidence 555555533
No 257
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=89.83 E-value=0.89 Score=45.39 Aligned_cols=136 Identities=10% Similarity=0.043 Sum_probs=81.7
Q ss_pred ccccccc---ccHHHHHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcc----cCchHHHHH-HHHHHHHHHHHHHHH
Q 015916 28 GNNYTFS---NYSDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDR----IPAPIILLI-GSLEGLVGYGAQWLV 98 (398)
Q Consensus 28 g~~~~~s---~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr----~G~r~~~~~-g~~~~~ig~~~~~~~ 98 (398)
|..++|. .|.+|+.+..|++....+.+-...-+.. .++|+.|..+|| |||||..+. +.+..+++.+++.++
T Consensus 43 Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~a 122 (498)
T KOG0637|consen 43 GVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYA 122 (498)
T ss_pred HHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhH
Confidence 4444443 3677788889999987777544444544 569999999997 898886654 445556677766553
Q ss_pred Hhc-----ccCCc-----hHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcc-hHHHHHhhhhhhHHHHHHHH
Q 015916 99 VSR-----KIQPL-----SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGP-VSGILKGYVGLSTAIFTDLC 163 (398)
Q Consensus 99 ~~~-----~~~~~-----~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~-a~gi~~~~~glg~~i~~~l~ 163 (398)
..- ..... ...+..+...+.=+..-....++-....+.+. ++|-+ |.+......++|+.+.-.+.
T Consensus 123 aDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g 199 (498)
T KOG0637|consen 123 ADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALG 199 (498)
T ss_pred hhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecc
Confidence 210 00000 11122222333333443445567777777773 33333 88888888888877765544
No 258
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=87.38 E-value=1.1 Score=44.62 Aligned_cols=138 Identities=13% Similarity=-0.003 Sum_probs=73.2
Q ss_pred cccccccccHHHHHHHcCCChhhHHHHHHHHHhhh-hhhhhhhhhhcccC-chHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 015916 28 GNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIP-APIILLIGSLEGLVGYGAQWLVVSRKIQP 105 (398)
Q Consensus 28 g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G-~r~~~~~g~~~~~ig~~~~~~~~~~~~~~ 105 (398)
|..|+.+.........-|++....+++.....+++ +.+...|.+.||.. -|.++++......++.+.+..+ ....
T Consensus 280 g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~-t~~~-- 356 (480)
T KOG2563|consen 280 GLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTC-TLFL-- 356 (480)
T ss_pred HHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh-hccC--
Confidence 34455554444333345677777788655555555 45899999999965 4555555555555553222221 1111
Q ss_pred chHHHHHHHHHHHhhhhhhhhhHHHHH-HHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcC
Q 015916 106 LSYWQMCVFLCMGGNSTTWMNTAVLVT-CIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (398)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~-~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 168 (398)
...+.++.-..+.|+.....++...-. +..-||..-|.-.|++.....+=+.+...+.+...+
T Consensus 357 ~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~ 420 (480)
T KOG2563|consen 357 GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAE 420 (480)
T ss_pred CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhh
Confidence 112333332223333222222322323 456779877888888776655555565555555544
No 259
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=84.69 E-value=1.3 Score=45.19 Aligned_cols=57 Identities=21% Similarity=0.100 Sum_probs=43.7
Q ss_pred HHHHHHHcCCChhhHHHHHHHHH-hhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHH
Q 015916 37 SDALKTLMNLTQLELNNLSVVKD-IGKAFGLLAGLASDRIPAPIILLIGSLEGLVGYG 93 (398)
Q Consensus 37 ~~~l~~~~g~s~~~~~~i~~~~~-~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~ 93 (398)
.+.+-+++|++..+.+.+....- +..+..|+.|.++||+-.|+.+++|..+..+...
T Consensus 34 l~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~ 91 (618)
T KOG3762|consen 34 LAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTAT 91 (618)
T ss_pred HHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 34456789999999999644444 4445689999999999999988888877665443
No 260
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=84.54 E-value=15 Score=37.26 Aligned_cols=130 Identities=9% Similarity=0.083 Sum_probs=81.4
Q ss_pred cccccHHHHH-HH-cC--CChhhHHHHHHHHHhhh-hhhhhhhhhhcccC-------chHHHHHHHHHHHHHHHHHHHHH
Q 015916 32 TFSNYSDALK-TL-MN--LTQLELNNLSVVKDIGK-AFGLLAGLASDRIP-------APIILLIGSLEGLVGYGAQWLVV 99 (398)
Q Consensus 32 ~~s~~~~~l~-~~-~g--~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G-------~r~~~~~g~~~~~ig~~~~~~~~ 99 (398)
+++.|..... ++ +| ++.++.+ +...+.. +++|+..++.-+.+ .+.=+.+|.++++.+++++....
T Consensus 306 sl~~~a~~~v~~~~~g~~vp~~~fQ---slNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~ 382 (498)
T COG3104 306 SLNLYADRNVNRQIFGFEVPPAWFQ---SLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAG 382 (498)
T ss_pred hHHHHHHHhhcccccceecCHHHHH---hhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 4555655542 23 33 3444333 3333333 23555555555522 23456677778888888776541
Q ss_pred --hcc-cCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccC-CcchHHHHHhhhhhhHHHHHHHHH
Q 015916 100 --SRK-IQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGYVGLSTAIFTDLCS 164 (398)
Q Consensus 100 --~~~-~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~ 164 (398)
.+. ....+.+.+....+++++|-=+..+..+..+.+.-|++ .+.+++........|..+...+..
T Consensus 383 ~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 383 IWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 121 22245777777788888988778888889999999976 899999888877777776665544
No 261
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=83.09 E-value=59 Score=33.33 Aligned_cols=48 Identities=13% Similarity=-0.018 Sum_probs=28.7
Q ss_pred HHHHHHH--cCCChhhHHHHHHHHHhhh--hh-hhh-hhhhhcccCchHHHHHH
Q 015916 37 SDALKTL--MNLTQLELNNLSVVKDIGK--AF-GLL-AGLASDRIPAPIILLIG 84 (398)
Q Consensus 37 ~~~l~~~--~g~s~~~~~~i~~~~~~~~--~~-~~~-~G~l~Dr~G~r~~~~~g 84 (398)
.|-+-+. -+.|-+|.+.++.+.--.. +. +|+ =.....|+||||.-++-
T Consensus 23 iPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP 76 (544)
T PF13000_consen 23 IPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIP 76 (544)
T ss_pred chhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhH
Confidence 3555554 5778888777655433332 23 443 34456689999987654
No 262
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=73.14 E-value=23 Score=35.21 Aligned_cols=59 Identities=14% Similarity=0.043 Sum_probs=46.4
Q ss_pred chHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHHHH
Q 015916 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCS 164 (398)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~ 164 (398)
++.|.+++..+.-|+-.|..|+-....+.+..| ++|-.++|....+-++|-.+...+.-
T Consensus 333 psi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l 392 (402)
T PF02487_consen 333 PSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGL 392 (402)
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 357777767777888888889888888888886 57999999999998888766665543
No 263
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=70.64 E-value=94 Score=30.94 Aligned_cols=172 Identities=13% Similarity=0.002 Sum_probs=91.2
Q ss_pred HhcccccccccHHHHHHHcCCChhhHHHHHHHHHhhhhhhhhhhhhhc-----ccCchHHHHHHHHHHHHHHHHHHHHH-
Q 015916 26 ISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASD-----RIPAPIILLIGSLEGLVGYGAQWLVV- 99 (398)
Q Consensus 26 ~~g~~~~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~D-----r~G~r~~~~~g~~~~~ig~~~~~~~~- 99 (398)
.-|..+..---.|.+-+.=|.|-++.+.++.+.--. ..-+...++.| |+||||..++-. -+.+|.++..++.
T Consensus 42 lQGiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~-q~llG~~mllLs~~ 119 (510)
T KOG3574|consen 42 LQGIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYWPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPC-QYLLGLFMLLLSYL 119 (510)
T ss_pred HcCCchhHhhhhHHHhcCCCcchhhhhhhhhhhhHH-HHHHHHHhhhHHHHHHhhccccceeeeh-HHHHHHHHHHHhhC
Confidence 446655443455767666778887777654443211 12467788888 999999765432 2333444333322
Q ss_pred -hccc----CCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhh-ccCCcchHHHHHhhhhhhHHHHHHHHHhHcCC----
Q 015916 100 -SRKI----QPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNF-RRNRGPVSGILKGYVGLSTAIFTDLCSALFAD---- 169 (398)
Q Consensus 100 -~~~~----~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~F-p~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~---- 169 (398)
.... ..++...+....++.-+..+.-..+.=....... |++-|-|+..-..+...|.++...++-.+...
T Consensus 120 v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N 199 (510)
T KOG3574|consen 120 VDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCN 199 (510)
T ss_pred CCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhh
Confidence 1101 1122222222223333333333333333333344 45678888777777777766554443332221
Q ss_pred -------------ChhHHHHHHHHHHHHHHHhhhhcccccCCC
Q 015916 170 -------------DPAKFLFMLAIVPFVVCLGAIFFLRETTPA 199 (398)
Q Consensus 170 -------------~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~ 199 (398)
...+|+.+-+.+..+...+..++-+|++++
T Consensus 200 ~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~ 242 (510)
T KOG3574|consen 200 TYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDES 242 (510)
T ss_pred HHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh
Confidence 124677777777777777777777777765
No 264
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=69.34 E-value=84 Score=32.89 Aligned_cols=104 Identities=16% Similarity=0.077 Sum_probs=64.6
Q ss_pred ccHHHHHHHcCCChhhHHH-HHHHHHhhhhhhhhhhhhhcc-cCchHHHHHHHHHHHHHHHHHHHHHhccc---------
Q 015916 35 NYSDALKTLMNLTQLELNN-LSVVKDIGKAFGLLAGLASDR-IPAPIILLIGSLEGLVGYGAQWLVVSRKI--------- 103 (398)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~-i~~~~~~~~~~~~~~G~l~Dr-~G~r~~~~~g~~~~~ig~~~~~~~~~~~~--------- 103 (398)
.....+..+++.+..++.- +...........+.+++++|- +||-+++.++.++..+|.+++.+...-..
T Consensus 59 nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~ 138 (571)
T KOG1237|consen 59 NLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFK 138 (571)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCC
Confidence 3445577888888766555 444433333446788999997 68999999999999998776655322110
Q ss_pred ------CCchH---HHHHHHHHHHhhhhhhhhhHHHHHHHHhhc
Q 015916 104 ------QPLSY---WQMCVFLCMGGNSTTWMNTAVLVTCIRNFR 138 (398)
Q Consensus 104 ------~~~~~---~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp 138 (398)
...+- ..++....+..+|.|..-......-++-|+
T Consensus 139 ~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd 182 (571)
T KOG1237|consen 139 PGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFD 182 (571)
T ss_pred CCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccC
Confidence 01122 233344455666776544555566778887
No 265
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=66.36 E-value=8.2 Score=39.23 Aligned_cols=187 Identities=15% Similarity=0.197 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHhcc-ccc-ccccHHHHHHHcCCChhhHHHH-HHHHHhhhhh----hhhhhhhh-cccCchHHHHHHH
Q 015916 14 WLGFVTAVWVQAISGN-NYT-FSNYSDALKTLMNLTQLELNNL-SVVKDIGKAF----GLLAGLAS-DRIPAPIILLIGS 85 (398)
Q Consensus 14 w~~l~~~~~~~~~~g~-~~~-~s~~~~~l~~~~g~s~~~~~~i-~~~~~~~~~~----~~~~G~l~-Dr~G~r~~~~~g~ 85 (398)
|...+.++......-. ... -+.+.+.....++|+.++.-.. +....+.+.. .+..+... -++-.|..+..+.
T Consensus 261 ~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~ 340 (488)
T KOG2325|consen 261 WVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGF 340 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehH
Confidence 5555555554332222 222 2334444577889998887662 3333333221 22222222 3445577777775
Q ss_pred HHHHHHHHHHHHHHh---ccc---------------------CCchHHHHHH-HHHHHhhhhhhhhhHHHHHHHHhh-cc
Q 015916 86 LEGLVGYGAQWLVVS---RKI---------------------QPLSYWQMCV-FLCMGGNSTTWMNTAVLVTCIRNF-RR 139 (398)
Q Consensus 86 ~~~~ig~~~~~~~~~---~~~---------------------~~~~~~~l~~-~~~l~G~g~g~~~~~~~~~~~~~F-p~ 139 (398)
......+.+.-+... ++. +..+.+.+++ +-++.|.+......+..+.-+|.. |+
T Consensus 341 l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~ 420 (488)
T KOG2325|consen 341 LIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPR 420 (488)
T ss_pred HHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCc
Confidence 555555444322100 000 0011222232 345677777766677777788888 68
Q ss_pred CCcchHHHHHhhhhhhHHHHHHHHHhHcCCCh--hHHHHHHHHHHHHHHHhhhhcccccCCCC
Q 015916 140 NRGPVSGILKGYVGLSTAIFTDLCSALFADDP--AKFLFMLAIVPFVVCLGAIFFLRETTPAS 200 (398)
Q Consensus 140 ~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~l~~~p~~~ 200 (398)
++|++.|+.......+-.+.+.+....+...+ +.+.+..+.+.....+...++.|..|...
T Consensus 421 ~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~~~r~~~~~~ 483 (488)
T KOG2325|consen 421 DQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIVFLKRLVPLKK 483 (488)
T ss_pred cccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHHHHhccccee
Confidence 89999999999999998888887777766433 44455555555566666666666666543
No 266
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=61.79 E-value=8.1 Score=37.54 Aligned_cols=42 Identities=12% Similarity=0.195 Sum_probs=32.8
Q ss_pred HHHHHhCCC--chhHHHHHHHHHHHHhhhhhhhhhHHHHhHhcC
Q 015916 357 QIGLALGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIKMVHC 398 (398)
Q Consensus 357 ~i~~~~g~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~~~~~~ 398 (398)
..+++.|++ +.+.+....-+.+.+-..+.|.+.||+|||+.|
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~c 102 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKAC 102 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence 466788887 466666667777778888899999999999854
No 267
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=55.82 E-value=3.8 Score=39.08 Aligned_cols=20 Identities=20% Similarity=0.404 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhhhhhh
Q 015916 369 IFVSLTSIWGFFGRIISGSV 388 (398)
Q Consensus 369 ~~vsl~si~~~~GRl~~G~l 388 (398)
.+..+++++-.+||.+.++.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~ 205 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWP 205 (309)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHHhcchhccee
Confidence 46678999999999998875
No 268
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=53.89 E-value=47 Score=34.01 Aligned_cols=87 Identities=15% Similarity=0.163 Sum_probs=52.3
Q ss_pred HhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc
Q 015916 59 DIGKAFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR 138 (398)
Q Consensus 59 ~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp 138 (398)
.++.+..+.+|.+-.++.+.--+.++.+-..-+.+++.... .+++|..|+..++.+..-.+..+.+..-+++...
T Consensus 309 llga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~-----t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~ 383 (511)
T TIGR00806 309 LLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQ-----SHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLS 383 (511)
T ss_pred HHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhc-----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34555678888887666443333333333332222222221 1578888887777776556665666666778887
Q ss_pred cCC-cchHHHHHh
Q 015916 139 RNR-GPVSGILKG 150 (398)
Q Consensus 139 ~~R-G~a~gi~~~ 150 (398)
+++ |+..|+.+.
T Consensus 384 ~~~~aLvFGiNtf 396 (511)
T TIGR00806 384 KELCALVFGINTF 396 (511)
T ss_pred ccceEEEEecHHH
Confidence 654 998888643
No 269
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=52.64 E-value=42 Score=36.03 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=41.9
Q ss_pred ccccccHHH-HHHHcCCChhhHHHHHHHHHhhh-hhh-hhhhhhhccc--CchHHHHHHHHHHHHHHH
Q 015916 31 YTFSNYSDA-LKTLMNLTQLELNNLSVVKDIGK-AFG-LLAGLASDRI--PAPIILLIGSLEGLVGYG 93 (398)
Q Consensus 31 ~~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~-~~~-~~~G~l~Dr~--G~r~~~~~g~~~~~ig~~ 93 (398)
..+..|.|. ++++||.+++.++.+.....+.. .++ .++|++..|+ ..|.++.+..+...+.++
T Consensus 409 ~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~ 476 (735)
T KOG3626|consen 409 TGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLL 476 (735)
T ss_pred hhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHH
Confidence 455678877 58899999999999554444444 444 6899999986 445555554444444433
No 270
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=48.00 E-value=34 Score=32.89 Aligned_cols=125 Identities=14% Similarity=0.069 Sum_probs=72.0
Q ss_pred hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcch
Q 015916 65 GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPV 144 (398)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a 144 (398)
-+.+-.+.||+.--.=+.+..++.+.++++.++. .+.+.-..+-++..++.|++-..-..+ +..+|+ .+
T Consensus 79 Kl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs-------~s~~~sL~GV~~aSissGlGEiTFL~l-ss~Y~~---~~ 147 (409)
T KOG3880|consen 79 KLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFS-------NSVPMSLLGVVFASISSGLGEITFLAL-SSRYPS---IV 147 (409)
T ss_pred HHhchhhhhhcccchHHHHHHHHHhcceEEEEec-------cchhHHHhhhhhhhhcCCcceeehhhh-hccCCC---ce
Confidence 4566677888544433455566777777776653 345554455666777888776544433 333333 22
Q ss_pred HHHHHhhhhhhHHHHHHHHHhH---cCCChhHHHHHHHHHHHHHHHhhhhcccccCCCC
Q 015916 145 SGILKGYVGLSTAIFTDLCSAL---FADDPAKFLFMLAIVPFVVCLGAIFFLRETTPAS 200 (398)
Q Consensus 145 ~gi~~~~~glg~~i~~~l~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~p~~~ 200 (398)
+.-...|.|..+.+++.-+..+ ++-....-++.....|++..+...+.+++|+...
T Consensus 148 i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~ 206 (409)
T KOG3880|consen 148 IAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVY 206 (409)
T ss_pred eccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCcccc
Confidence 2223344444444444333322 2224566677777788888888888888777543
No 271
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=46.43 E-value=1.1e+02 Score=30.66 Aligned_cols=85 Identities=16% Similarity=0.071 Sum_probs=51.3
Q ss_pred hhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhcc
Q 015916 60 IGKAFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR 139 (398)
Q Consensus 60 ~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~ 139 (398)
+|.+..+..|.+-.++.+..-+.++..-..-+..++..... +++|..++..++.+..--+..+.+..-+++...+
T Consensus 297 lgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t-----~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~ 371 (412)
T PF01770_consen 297 LGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFT-----GNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSE 371 (412)
T ss_pred HHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34455788888877777766555555444433333332222 5788888776666544444445555557777775
Q ss_pred C-CcchHHHHH
Q 015916 140 N-RGPVSGILK 149 (398)
Q Consensus 140 ~-RG~a~gi~~ 149 (398)
+ -|++.|+-+
T Consensus 372 e~yaLVFGiNt 382 (412)
T PF01770_consen 372 ERYALVFGINT 382 (412)
T ss_pred cceeeeeeeHH
Confidence 4 588887754
No 272
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=44.24 E-value=59 Score=32.94 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=22.6
Q ss_pred cccHHHHHHHcCCChhhHHHHHHHHHhhhhh-hhhhhhhhcc
Q 015916 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDR 74 (398)
Q Consensus 34 s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr 74 (398)
..+.+...+--|.+..+..++......++.+ .+++|.+.||
T Consensus 268 p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~ 309 (493)
T KOG1330|consen 268 PAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDK 309 (493)
T ss_pred hhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHH
Confidence 3444444444454444444455544455554 5788888888
No 273
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=42.81 E-value=3.4e+02 Score=26.76 Aligned_cols=59 Identities=14% Similarity=-0.054 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHHhH
Q 015916 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSAL 166 (398)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~ 166 (398)
+.+.+++...+.|.-.|.-.+..+.+..+-..+-+-....+.. .=.+|+.....+...+
T Consensus 104 ~~~Vly~lt~vIG~LVG~EiPL~mrml~~r~a~~k~~~s~vl~-~DYLGal~~gLl~p~l 162 (508)
T COG4262 104 SRLVLYALTAVIGVLVGAEIPLLMRMLQRRQAKAKDLGSRVLT-LDYLGALAGGLLWPFL 162 (508)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhhhhhhhh-hHhhhhhhHHHHHHHH
Confidence 4566666666666666655455555555533322222222222 2345555444444433
No 274
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=42.11 E-value=37 Score=34.30 Aligned_cols=37 Identities=16% Similarity=-0.035 Sum_probs=26.0
Q ss_pred hhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHH
Q 015916 61 GKAFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWL 97 (398)
Q Consensus 61 ~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~ 97 (398)
..+.+...-++.||+|-|+..+.+...+.++..+.++
T Consensus 345 lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl 381 (498)
T KOG0637|consen 345 LGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGL 381 (498)
T ss_pred HHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhh
Confidence 3345778889999999877777766656665555544
No 275
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=41.76 E-value=40 Score=30.66 Aligned_cols=91 Identities=9% Similarity=-0.007 Sum_probs=53.3
Q ss_pred hhhhhhhcccCchH--------HHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHhh
Q 015916 66 LLAGLASDRIPAPI--------ILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNF 137 (398)
Q Consensus 66 ~~~G~l~Dr~G~r~--------~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~F 137 (398)
+=.+.+.||||... +.++|.++.++-+-+++-.......-+. +....-.|+|.+.+..++.....+.+
T Consensus 125 p~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP----~ALAMasGvGSgSMMaAa~~aL~~~~ 200 (241)
T PF11299_consen 125 PNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHP----YALAMASGVGSGSMMAAASGALAAAY 200 (241)
T ss_pred cceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCH----HHHHHHcCCcHHHHHHHHHHHHHHHC
Confidence 45577899998764 3445554444433332211111000011 22334467888888888888999999
Q ss_pred ccCCcchHHHHHhhhhhhHHHHH
Q 015916 138 RRNRGPVSGILKGYVGLSTAIFT 160 (398)
Q Consensus 138 p~~RG~a~gi~~~~~glg~~i~~ 160 (398)
|+......++..+.+-+.+....
T Consensus 201 P~~a~~i~A~AaaSNllt~~~G~ 223 (241)
T PF11299_consen 201 PEMADQILAFAAASNLLTSVTGL 223 (241)
T ss_pred cchHHHHHHHHHHHHHHHHHHHH
Confidence 98877777777665555544443
No 276
>PRK10692 hypothetical protein; Provisional
Probab=40.27 E-value=88 Score=23.67 Aligned_cols=19 Identities=16% Similarity=0.050 Sum_probs=11.0
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 015916 77 APIILLIGSLEGLVGYGAQ 95 (398)
Q Consensus 77 ~r~~~~~g~~~~~ig~~~~ 95 (398)
||...++|.+++++|.+.+
T Consensus 3 Rk~a~~~GN~lMglGmv~M 21 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVVM 21 (92)
T ss_pred chhhHHHhhHHHHHHHHHH
Confidence 4555666666666665544
No 277
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=38.83 E-value=76 Score=23.86 Aligned_cols=19 Identities=16% Similarity=0.118 Sum_probs=11.0
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 015916 77 APIILLIGSLEGLVGYGAQ 95 (398)
Q Consensus 77 ~r~~~~~g~~~~~ig~~~~ 95 (398)
||...++|.+++++|.+.+
T Consensus 3 Rk~a~~~GN~lMglGmv~M 21 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVVM 21 (89)
T ss_pred chhhHHHhhHHHHHhHHHH
Confidence 4555666666666665543
No 278
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.12 E-value=65 Score=25.54 Aligned_cols=23 Identities=26% Similarity=0.193 Sum_probs=14.1
Q ss_pred hhhhhhhhhhhhccc-CchHHHHH
Q 015916 61 GKAFGLLAGLASDRI-PAPIILLI 83 (398)
Q Consensus 61 ~~~~~~~~G~l~Dr~-G~r~~~~~ 83 (398)
|.+++...||+.||| |.++..++
T Consensus 55 GilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 55 GILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHH
Confidence 335577888888885 44443333
No 279
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=37.18 E-value=1.7e+02 Score=22.60 Aligned_cols=35 Identities=14% Similarity=0.118 Sum_probs=17.7
Q ss_pred HHHHhhhhh-hhhhhhhhcccCchHHHHHHHHHHHH
Q 015916 56 VVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLV 90 (398)
Q Consensus 56 ~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~i 90 (398)
....++..+ ..+.|.+.|+.|.+....+......+
T Consensus 94 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (141)
T TIGR00880 94 AGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALA 129 (141)
T ss_pred HhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHH
Confidence 333344443 34666666666666555444443333
No 280
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=36.78 E-value=1e+02 Score=24.17 Aligned_cols=24 Identities=29% Similarity=0.533 Sum_probs=14.5
Q ss_pred hhhhhhhhhhcc-cCchHHHHHHHH
Q 015916 63 AFGLLAGLASDR-IPAPIILLIGSL 86 (398)
Q Consensus 63 ~~~~~~G~l~Dr-~G~r~~~~~g~~ 86 (398)
+.+.+.|+..|+ ||-++...+..+
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~l 81 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTML 81 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHH
Confidence 457777888886 665554444333
No 281
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=35.97 E-value=4.6e+02 Score=26.19 Aligned_cols=87 Identities=16% Similarity=0.217 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccC--CcchHHHHHhhhhhhHHHHHHHHHhHcCCCh--hHHHHHHHHHHH
Q 015916 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRN--RGPVSGILKGYVGLSTAIFTDLCSALFADDP--AKFLFMLAIVPF 183 (398)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~--RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~--~~~~~~~~~~~~ 183 (398)
++..++.-++.+.+.+... .+..=.+.-||++ .+...|-..+| .-.++...+....+++.. ...++.++.+..
T Consensus 117 f~vt~~~vv~~~~a~a~~q-gs~~G~a~~~P~~ytqavm~G~a~aG--~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~~~ 193 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQ-GSLYGLAGLFPSEYTQAVMSGQALAG--TLTSLLRILTKAAFSDSRTSALIYFITSTVIL 193 (406)
T ss_pred HHHHHHHHHHHhhhhhhhc-cchhhhhhcCCHHHHHHHHhcchhHh--HHHHHHHHHHHHhcCCCCceeehhHHHHHHHH
Confidence 4444445566666666543 3444466778865 45444443322 222333444555555432 345566666777
Q ss_pred HHHHhhhhcccccC
Q 015916 184 VVCLGAIFFLRETT 197 (398)
Q Consensus 184 ~i~~~~~~~l~~~p 197 (398)
++|+++...++..|
T Consensus 194 llC~i~y~~l~~lp 207 (406)
T KOG1479|consen 194 LLCFVLYLVLPKLP 207 (406)
T ss_pred HHHHHHHHHhhcch
Confidence 77888777666555
No 282
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=33.50 E-value=1.3e+02 Score=29.22 Aligned_cols=35 Identities=11% Similarity=0.159 Sum_probs=25.7
Q ss_pred HhCCCchhHHHHHHHHHHHHhhhhhhhhhHHHHhH
Q 015916 361 ALGYVDVSIFVSLTSIWGFFGRIISGSVSEYFIKM 395 (398)
Q Consensus 361 ~~g~~~~a~~vsl~si~~~~GRl~~G~lsD~~~~~ 395 (398)
.+|.+........+++++.+...+.|.++.+++|.
T Consensus 306 ~~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~ 340 (390)
T KOG3097|consen 306 ALGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRP 340 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 34444555677788888888888888888887774
No 283
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=33.39 E-value=91 Score=30.61 Aligned_cols=84 Identities=17% Similarity=-0.056 Sum_probs=48.9
Q ss_pred HhhhhhhhhhhhhhcccCchHHHHHHHH--HHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhhhhhhhhhHHHHHHHHh
Q 015916 59 DIGKAFGLLAGLASDRIPAPIILLIGSL--EGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRN 136 (398)
Q Consensus 59 ~~~~~~~~~~G~l~Dr~G~r~~~~~g~~--~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~ 136 (398)
.+|....+..|.+--++.|+.-++++.. ..+...++++. ++++|..++..++.+.--.+..+.+...++++
T Consensus 282 lLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~-------t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~n 354 (433)
T KOG3810|consen 282 LLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQ-------TQHIWVCYAGYVLFRVIYQLTITIATFQIARN 354 (433)
T ss_pred HHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhc-------ccceehhhhhHHHHHhhHhhhhhHHHHHHHHh
Confidence 3455567888998777776644433333 33333333322 14577777655555544444445556667788
Q ss_pred hccC-CcchHHHHH
Q 015916 137 FRRN-RGPVSGILK 149 (398)
Q Consensus 137 Fp~~-RG~a~gi~~ 149 (398)
..++ -|+..|+-+
T Consensus 355 L~~e~~gLvFGiNT 368 (433)
T KOG3810|consen 355 LSSELFGLVFGINT 368 (433)
T ss_pred hhhhhheeeeehHH
Confidence 8754 688888754
No 284
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=33.07 E-value=52 Score=30.41 Aligned_cols=51 Identities=25% Similarity=0.400 Sum_probs=36.0
Q ss_pred ccceeeeeechHHHHHHhCCCc--hhHHHHHHHHHHHHhhhhhhhhhHHHHhHh
Q 015916 345 VGTGLAVMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIKMV 396 (398)
Q Consensus 345 ~~~g~~~~~n~~~i~~~~g~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~~~~ 396 (398)
.|....+..-.+++-+.+|+++ .+.+-....++..+| +..|.+.|+++++.
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~ 67 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWV 67 (250)
T ss_pred cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHH
Confidence 3444445555667777889984 445666666777776 88899999999875
No 285
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=29.37 E-value=1.1e+02 Score=26.09 Aligned_cols=83 Identities=14% Similarity=0.055 Sum_probs=41.5
Q ss_pred hhhcccCchHHHHHHHHHH-HHHHHHHHHH-HhcccCC-chHHHHHHHHHHHhhhh-hhhhhHHHHHHHHhhccCCcchH
Q 015916 70 LASDRIPAPIILLIGSLEG-LVGYGAQWLV-VSRKIQP-LSYWQMCVFLCMGGNST-TWMNTAVLVTCIRNFRRNRGPVS 145 (398)
Q Consensus 70 ~l~Dr~G~r~~~~~g~~~~-~ig~~~~~~~-~~~~~~~-~~~~~l~~~~~l~G~g~-g~~~~~~~~~~~~~Fp~~RG~a~ 145 (398)
.+.||.-+|..+..|.-.. +++.+..++. .....-. ++...+..-.++.|.|. |+.|. .+-+.|=|++.|...
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGisYG---ilSaSWD~~r~GSll 132 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGISYG---ILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhhhh---hcccccCCCCCCCcc
Confidence 4567777766555544322 2222222222 2221111 12222333344445444 33332 345678788899999
Q ss_pred HHHHhhhhhh
Q 015916 146 GILKGYVGLS 155 (398)
Q Consensus 146 gi~~~~~glg 155 (398)
|+-..-..++
T Consensus 133 G~~e~~~N~~ 142 (153)
T PF11947_consen 133 GWEEFKRNWG 142 (153)
T ss_pred cHHHHHHhHH
Confidence 9877666554
No 286
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=27.66 E-value=49 Score=32.39 Aligned_cols=150 Identities=16% Similarity=0.080 Sum_probs=89.1
Q ss_pred HHcCCChhhHHH-HHHHHHhhhhhh-hhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHh
Q 015916 42 TLMNLTQLELNN-LSVVKDIGKAFG-LLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGG 119 (398)
Q Consensus 42 ~~~g~s~~~~~~-i~~~~~~~~~~~-~~~G~l~Dr~G~r~~~~~g~~~~~ig~~~~~~~~~~~~~~~~~~~l~~~~~l~G 119 (398)
.+-+++..|+.- +.-.-.=..++. .+.=.+.|..--|+++++-.+.....+.++-+. ++.+.+-+.-+..|
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g-------~sV~~mQvlE~FyG 106 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFG-------PSVKAMQVLEFFYG 106 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhc-------CCchheeeehhhcC
Confidence 345677776653 322222222232 344557899989999888777776666665442 45665555555556
Q ss_pred hhhhhhhhHHHHHH-HHhhccCCcchHHHHHhhhhhhHHHHHHHHHhHcCCCh--hHHHHHHHHHHHHHHHhhhhccccc
Q 015916 120 NSTTWMNTAVLVTC-IRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDP--AKFLFMLAIVPFVVCLGAIFFLRET 196 (398)
Q Consensus 120 ~g~g~~~~~~~~~~-~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~l~~~ 196 (398)
..++. ..+-.+.+ +++=|+++-++.|-.-+..=.|-.....+...+...+. ...+=.+......+.+...+++|.+
T Consensus 107 ~~tAa-EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v 185 (433)
T KOG3810|consen 107 PATAA-EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRV 185 (433)
T ss_pred hHHHH-HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCC
Confidence 54442 22333333 33435567788887777665665565566555554333 3344456667777888888999988
Q ss_pred CCC
Q 015916 197 TPA 199 (398)
Q Consensus 197 p~~ 199 (398)
|+.
T Consensus 186 ~rS 188 (433)
T KOG3810|consen 186 KRS 188 (433)
T ss_pred chh
Confidence 854
No 287
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=25.32 E-value=24 Score=36.66 Aligned_cols=63 Identities=17% Similarity=0.169 Sum_probs=0.0
Q ss_pred ccccccHHH-HHHHcCCChhhHHHH-HHHHHhhhhh-hhhhhhhhcccCc--hHHHHHHHHHHHHHHH
Q 015916 31 YTFSNYSDA-LKTLMNLTQLELNNL-SVVKDIGKAF-GLLAGLASDRIPA--PIILLIGSLEGLVGYG 93 (398)
Q Consensus 31 ~~~s~~~~~-l~~~~g~s~~~~~~i-~~~~~~~~~~-~~~~G~l~Dr~G~--r~~~~~g~~~~~ig~~ 93 (398)
..+..|.|. ++.+|+.+.++++.+ ......++.+ .+++|.+..|+.. |.++....+...++.+
T Consensus 322 ~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~ 389 (539)
T PF03137_consen 322 SGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVI 389 (539)
T ss_dssp --------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHH
Confidence 456677776 588999999999985 4444444455 5799999999754 4455554444444433
No 288
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=25.01 E-value=2.7e+02 Score=28.01 Aligned_cols=55 Identities=11% Similarity=0.134 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHHHhhc-cCCcchHHHHHhhhhhhHHHHHHH
Q 015916 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDL 162 (398)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l 162 (398)
-+..++..++.|+..|...+.++....+..+ ++|-.+..+...+..+|-++++.+
T Consensus 372 d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 372 DAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566788899999877777777777776 468777777766666665554443
No 289
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=24.94 E-value=5.5e+02 Score=23.65 Aligned_cols=56 Identities=11% Similarity=-0.035 Sum_probs=31.7
Q ss_pred chHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhccCCcchHHHHHhhhhhhHHHHHHHHH
Q 015916 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCS 164 (398)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~ 164 (398)
.+...++..+...|+-.. .....-...+..| +|.....+..++.++|..+...+..
T Consensus 32 ~s~~FyY~sg~~lGv~~s--~li~~~~~~k~lP-rk~~~~~~l~gg~~~~~y~l~~~~~ 87 (249)
T PF10225_consen 32 RSVLFYYSSGISLGVLAS--LLILLFQLSKLLP-RKSMFYAVLYGGWSFGLYFLQQLWE 87 (249)
T ss_pred cChhHHHhhhHHHHHHHH--HHHHHHHHHHHcc-CcchhHHHHhhhhHHHHHHHHHHHH
Confidence 344444544444444222 2334455788999 6666666777777777655555443
No 290
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=24.87 E-value=6.4e+02 Score=24.37 Aligned_cols=23 Identities=9% Similarity=0.242 Sum_probs=17.4
Q ss_pred hHHHHhccHhHHHHHHHHHhccc
Q 015916 324 TIFEAMWTVDFWILFVSFLCGVG 346 (398)
Q Consensus 324 t~~~~l~t~~Fw~l~~~~~~~~~ 346 (398)
..++.+++|..|...+++.+...
T Consensus 237 ~~~~~~~nP~~~a~~lgli~~~~ 259 (385)
T PF03547_consen 237 SILKLFKNPPLIAIILGLIIGLI 259 (385)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHH
Confidence 44678889999988887766654
No 291
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=24.44 E-value=2.8e+02 Score=29.55 Aligned_cols=74 Identities=12% Similarity=0.026 Sum_probs=40.5
Q ss_pred HHHHhhhhhhhhhHHHHHHHHhhccC-CcchHHHHHhhhhhhHHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHh
Q 015916 115 LCMGGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG 188 (398)
Q Consensus 115 ~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 188 (398)
.++.+.|-.+......-..-.-.|+. |..+.++..+..++|..+...+...-.-++.+.-+.+.+.+..+++++
T Consensus 572 ~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (654)
T TIGR00926 572 YVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFENFSVQAAEFFLFASLMLVVMAI 646 (654)
T ss_pred HHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHH
Confidence 34445555444333333444445664 888888888888888887776655433333333333344444444333
Done!