BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015920
(398 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 344 bits (882), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 169/351 (48%), Positives = 235/351 (66%), Gaps = 7/351 (1%)
Query: 20 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 79
I EP GVVL+I WNYPF L++ P+VGA+AAGNA++LKPSEV+ + LLA L+ +YMD
Sbjct: 99 IHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMD 158
Query: 80 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 139
+ VV+G V ET+ LL +++D I YTG++ V +IVMAAAAKHLTPV LELGGKSP
Sbjct: 159 QNLYLVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYV 218
Query: 140 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 199
D +L VACRR+ GK+ N+GQ C++PD+I+ FYG++ +
Sbjct: 219 DKDCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQ 277
Query: 200 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 259
S+D RI+N HF R+ L+D+ KV+ HGG D++ IAPT+L+DV S +M EE
Sbjct: 278 SRDYGRIINDRHFQRVKGLIDNQKVA----HGGTWDQSSRYIAPTILVDVDPQSPVMQEE 333
Query: 260 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 319
IFGP++PI+ V +E++ IN KPLA Y+F+NN+K+ ++ + S+GG+ ND VH
Sbjct: 334 IFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVH 393
Query: 320 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVP--VRYPP 368
+ V +LPFGGV SGMGAYHGK SF+ FSH+++ L + + + RYPP
Sbjct: 394 ITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKSLLNEEAHKARYPP 444
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 335 bits (860), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/348 (47%), Positives = 231/348 (66%), Gaps = 7/348 (2%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 82
EP GVVL+I WNYPF L++ P+VGAIAAGNA+VLKPSE++ +SLLA ++ +Y+D
Sbjct: 119 EPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKDL 178
Query: 83 IRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 142
V+ G V ET+ LL +++D I YTG++ V +I+M AAAKHLTPV LELGGKSP D
Sbjct: 179 YPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKN 238
Query: 143 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKD 202
+L VACRR+ GK+ N+GQ C++PD+I+ FYG++ +S+D
Sbjct: 239 CDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRD 297
Query: 203 LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFG 262
RI+++ HF R+ L++ KV+ +GG D IAPT+L DV S +M EEIFG
Sbjct: 298 YGRIISARHFQRVMGLIEGQKVA----YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFG 353
Query: 263 PLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAV 322
P+LPI+ V +E++ IN KPLA Y+F++N K+ ++ + S+GG+ ND VH+ +
Sbjct: 354 PVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITL 413
Query: 323 HSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGD--VPVRYPP 368
HSLPFGGV SGMG+YHGK SF+ FSH+++ L R + D + VRYPP
Sbjct: 414 HSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPP 461
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 191/341 (56%), Gaps = 10/341 (2%)
Query: 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 74
PS +V EP+GV II P+NYP L+L P++GAI GN ++KPSE P +S+++ K++
Sbjct: 121 PSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKII 180
Query: 75 GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 134
E + V++G E S LL +D I +TG+ V ++VM AAAKHLTPV+LELGGK
Sbjct: 181 AEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGK 240
Query: 135 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYG 194
P++ +L +++ GK+ N+GQ CI+PD++ Y
Sbjct: 241 CPLIVLPDADLDQTVNQLMFGKF-INSGQTCIAPDYL-----YVHYSVKDALLERLVERV 294
Query: 195 KNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDS 253
K L E ++V RL LL + G+++ G + D +K ++ T++ V +
Sbjct: 295 KTELPEINSTGKLVTERQVQRLVSLL--EATQGQVLVGSQADVSKRALSATVVDGVEWND 352
Query: 254 LIMSEEIFGPLLPILTVDKIEDSFDIINS-GTKPLAAYLFTNNKKLKQQFVETVSAGGLV 312
+MSEE+FGP+LP+L D + + D +N KPLA Y+F + + + + + +G
Sbjct: 353 PLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQ 412
Query: 313 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
+N +H LPFGG+ SGMG YHG FS+ F+HKK+V
Sbjct: 413 VNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 190/341 (55%), Gaps = 10/341 (2%)
Query: 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 74
PS +V EP+GV II P+NYP L+L P++GAI GN ++KPSE P +S+++ K++
Sbjct: 121 PSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKII 180
Query: 75 GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 134
E + V++G E S LL +D I +TG+ V ++VM AAAKHLTPV+LELGGK
Sbjct: 181 AEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGK 240
Query: 135 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYG 194
P++ +L +++ GK+ N+GQ I+PD++ Y
Sbjct: 241 CPLIVLPDADLDQTVNQLMFGKF-INSGQTXIAPDYL-----YVHYSVKDALLERLVERV 294
Query: 195 KNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDS 253
K L E ++V RL LL + G+++ G + D +K ++ T++ V +
Sbjct: 295 KTELPEINSTGKLVTERQVQRLVSLL--EATQGQVLVGSQADVSKRALSATVVDGVEWND 352
Query: 254 LIMSEEIFGPLLPILTVDKIEDSFDIINS-GTKPLAAYLFTNNKKLKQQFVETVSAGGLV 312
+MSEE+FGP+LP+L D + + D +N KPLA Y+F + + + + + +G
Sbjct: 353 PLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQ 412
Query: 313 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
+N +H LPFGG+ SGMG YHG FS+ F+HKK+V
Sbjct: 413 VNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 188/377 (49%), Gaps = 35/377 (9%)
Query: 5 VQAKTSITTFPSSA--------EIVP----------EPFGVVLIISPWNYPFLLSLDPVV 46
V+ + SI TF +A E++P EP G+V I+P+N+P LS +
Sbjct: 93 VEVERSIGTFKLAAFYVKEHRDEVIPSDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIA 152
Query: 47 GAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD-------LSSIRVVEGAVAETSALLDQ 99
AIA GN +V PS AP LAK++ + + ++ G V ++++
Sbjct: 153 PAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNE 212
Query: 100 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC 159
K + I +TG+S+V ++ A + LELGG +P + +L A +I G +
Sbjct: 213 KVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSF-I 269
Query: 160 NNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKL 218
GQ CIS I+ + A NPL+ K D+ +++ H + K+
Sbjct: 270 YAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKV 329
Query: 219 LDDD-KVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 277
++ GK++ GG+RD K PT +L+V RD+++ E F P++PI+ ++ E+
Sbjct: 330 VEKAIDEGGKLLLGGKRD--KALFYPT-ILEVDRDNILCKTETFAPVIPIIRTNE-EEMI 385
Query: 278 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 337
DI NS L + +FTN+ +F E + GG+VIND+++ ++PFGGV++SG+G
Sbjct: 386 DIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSL-FRQDNMPFGGVKKSGLGR 444
Query: 338 YHGKFSFDVFSHKKAVL 354
K++ + S+ K ++
Sbjct: 445 EGVKYAMEEMSNIKTII 461
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 171/343 (49%), Gaps = 12/343 (3%)
Query: 20 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 78
++ EP GVV +I+PWNYP L+++ V A+AAG A +LKPSE+A + L ++ E +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 79 DLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 136
++ ++ G E L DKI +TG+ +M AAA+ + PV LELGGKSP
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLELGGKSP 279
Query: 137 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGK 195
VVFD NL +A + G + N GQ C + +I ++ A
Sbjct: 280 IVVFDDIDNLDIAAEWTLFGIFA-NTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKIS 338
Query: 196 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD---KNKLRIAPTLLLDVP 250
+PLE L +V++ + ++ K + + K G I+ GGER K + PT++ DV
Sbjct: 339 DPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVN 398
Query: 251 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 310
I EE+FGP+L + T E + ++ N L A + + + K ++F + G
Sbjct: 399 TSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGI 458
Query: 311 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
+ IN + LP+GG + SG G GK+ + F + K V
Sbjct: 459 IWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQV 499
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 170/343 (49%), Gaps = 12/343 (3%)
Query: 20 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 78
++ EP GVV +I+PWNYP L+++ V A+AAG A +LKPSE+A + L ++ E +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 79 DLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 136
++ ++ G E L DKI +TG+ +M AAA+ + PV L LGGKSP
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLALGGKSP 279
Query: 137 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGK 195
VVFD NL +A + G + N GQ C + +I ++ A
Sbjct: 280 IVVFDDIDNLDIAAEWTLFGIFA-NTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKIS 338
Query: 196 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD---KNKLRIAPTLLLDVP 250
+PLE L +V++ + ++ K + + K G I+ GGER K + PT++ DV
Sbjct: 339 DPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVN 398
Query: 251 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 310
I EE+FGP+L + T E + ++ N L A + + + K ++F + G
Sbjct: 399 TSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGI 458
Query: 311 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
+ IN + LP+GG + SG G GK+ + F + K V
Sbjct: 459 IWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQV 499
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 166/352 (47%), Gaps = 19/352 (5%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GVV +I+PWNYP L++ + A+AAG VLKPSE+A + LA + E +
Sbjct: 167 EPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLELADICKEVGLPSG 226
Query: 82 SIRVVEG----AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 137
+ +V G A A SA D DK+ +TG+ + +MA+AA + PV LELGGKSP+
Sbjct: 227 VLNIVTGLGPDAGAPLSAHPDV--DKVAFTGSFETGKKIMASAAPMVKPVTLELGGKSPI 284
Query: 138 VFDSGINLKVACRRMIMGK-WGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKN 196
V +++ A + G W NGQ C + ++ A +
Sbjct: 285 VVFDDVDIDKAVEWTLFGCFW--TNGQICSATSRLLIHTKIAKKFNERMVAWAKNIKVSD 342
Query: 197 PLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD---KNKLRIAPTLLLDVPR 251
PLE L +V+ + ++ K + + K G I+ GG R + I PT++ D+
Sbjct: 343 PLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTIITDITT 402
Query: 252 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 311
I EE+FGP+L + +++ ++ N LA + + +++ Q+ E + AG +
Sbjct: 403 SMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCI 462
Query: 312 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVP 363
+N P+GG + SG G G+ D + K V +I D P
Sbjct: 463 WVN--CSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTE--YISDEP 510
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 171/352 (48%), Gaps = 18/352 (5%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GV I WNYPF+++ A+A GNA+V KPS + P + +LA++ E + +
Sbjct: 154 EPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVG 213
Query: 82 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 139
+ VV+G AET +LL + K+ +TG+ + VM +AK + V LELGGKSP++
Sbjct: 214 LVNVVQGG-AETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLI 272
Query: 140 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 199
L+ A R +M + GQ C + + ++ P +PL
Sbjct: 273 FKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331
Query: 200 SKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE-------RDKNKLRIAPTLLLDVP 250
++ + +++ ++ + K G +++ GGE + KN ++P +L +
Sbjct: 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCR 391
Query: 251 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 310
D + EEIFGP++ +L D E+ N+ T LA+ +FT + + + AG
Sbjct: 392 DDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGT 451
Query: 311 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV 362
IN ++ +PFGG + SG G +G+ + D +S K V+ +GDV
Sbjct: 452 CYINTYSISPV--EVPFGGYKMSGFGRENGQATVDYYSQLKTVIVE--MGDV 499
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 178/368 (48%), Gaps = 17/368 (4%)
Query: 11 ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLL 70
+ TF S ++ EP GVV +I+PWNYP L++ V A+AAG A +LKPSE+A + L
Sbjct: 140 MDTFKS--HVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLEL 197
Query: 71 AKLVGEY-MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPV 127
++ E + + ++ G E A L DK+ +TG+S +M AAA+ + PV
Sbjct: 198 GEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPV 257
Query: 128 LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXX 187
LELGGKSP+V ++L A I G + NGQ C + +I + A
Sbjct: 258 SLELGGKSPLVVFEDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNRIVK 316
Query: 188 XXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD---KNKLRIA 242
+PLE L +V+ + ++ K + + K G I+ GG R K I
Sbjct: 317 WIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIE 376
Query: 243 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 302
PT++ DV + I EE+FGP+L + T E++ D+ N L A + +N+ + ++
Sbjct: 377 PTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERV 436
Query: 303 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV 362
+ AG + +N P+GGV+ SG G G++ D + K V +I +
Sbjct: 437 TKAFKAGIVWVN--CSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQ--YISEE 492
Query: 363 PVRY--PP 368
P + PP
Sbjct: 493 PWGWYQPP 500
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 166/344 (48%), Gaps = 11/344 (3%)
Query: 18 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 77
+ ++ +P GVV +ISPWNYP L++ + A+AAG VLKPSE+A + ++ E
Sbjct: 142 SHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLEFGEVCNEV 201
Query: 78 -MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 134
+ + ++ G + A L DKI +TG+S VMA+AA+ + PV LELGGK
Sbjct: 202 GLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQLVKPVTLELGGK 261
Query: 135 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYG 194
SP+V +++ I G + NGQ C + ++ + A
Sbjct: 262 SPIVVFEDVDIDKVVEWTIFGCF-WTNGQICSATSRLLVHESIAAEFVDKLVKWTKNIKI 320
Query: 195 KNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD---KNKLRIAPTLLLDV 249
+P E L +++ + ++ K + K G I++GG R K I PT++ D+
Sbjct: 321 SDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKKGYYIEPTIVTDI 380
Query: 250 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 309
I EE+FGP+L + T +++ + N LAA +F+N+ + ++ + + G
Sbjct: 381 STSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLERCERITKALEVG 440
Query: 310 GLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
+ +N + P+GG++ SG G G++ + + K V
Sbjct: 441 AVWVNCSQPCFV--QAPWGGIKRSGFGRELGEWGIQNYLNIKQV 482
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 170/361 (47%), Gaps = 19/361 (5%)
Query: 20 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 78
I+ EP GVV +I+PWNYPFL++ + A+AAG A +LKPSE+A + L ++ E +
Sbjct: 147 ILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPSELASVTCLELGEICKEVGL 206
Query: 79 DLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 136
+ +V G E A L DKI +TG+S +M AA+ + PV LELGGKSP
Sbjct: 207 PRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMTTAAQLVKPVSLELGGKSP 266
Query: 137 VVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYG 194
+V ++L + GC NGQ C + +I + A
Sbjct: 267 IVVFEDVDLDKVAEWTVF---GCFFTNGQICSATSRLIVHESIAVEFVDKLVKWAENIKI 323
Query: 195 KNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR----IAPTLLLDV 249
+PLE L IV+ + ++ + K G + G R L+ + PT++ DV
Sbjct: 324 SDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRRPEHLKKGYFVEPTIITDV 383
Query: 250 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 309
I EE+FGP+L + T E++ ++ N L + + +N+ + ++ + + AG
Sbjct: 384 TTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSNDLERCERLSKALQAG 443
Query: 310 GLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRY--P 367
+ IN + P+GG++ SG G G++ + + K V + D P + P
Sbjct: 444 IVWIN--CAQPSFIQAPWGGIKRSGFGRELGEWGLENYLSVKQVTR--YTSDEPWGWYQP 499
Query: 368 P 368
P
Sbjct: 500 P 500
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 166/341 (48%), Gaps = 10/341 (2%)
Query: 20 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 78
++ EP GVV II+PWN+PF+++ + V AI +G +VLKPSE +S LA+L E +
Sbjct: 157 VLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGI 216
Query: 79 DLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 136
VV G +L D D + +TG+ RV + AA+ + V LELGGK P
Sbjct: 217 PDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGP 276
Query: 137 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKN 196
+ + +L A + G + N GQ CIS ++ + +
Sbjct: 277 QIVFADADLDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALXERLLDISRKVAFGD 335
Query: 197 PL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER--DKNKLRIAPTLLLDVPRD 252
PL E + ++ H ++ + SG +++ GGER + L APT+ V D
Sbjct: 336 PLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPD 395
Query: 253 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 312
I EEIFGP+L LT +++ + N+ L+A +++ N + Q + + AG
Sbjct: 396 XSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCW 455
Query: 313 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
IN +V LP GG ++SG+G G++ FD +S K V
Sbjct: 456 IN--SVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 153/339 (45%), Gaps = 11/339 (3%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GVV I WN P L+++ + A+ AG +VLKP+ P +++ LA++ E +
Sbjct: 145 EPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEG 204
Query: 82 SIRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 140
+ VV G + AL + D +TG+S V R V AA+ L P LELGGKS +
Sbjct: 205 VLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIIL 264
Query: 141 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLE 199
++L A M+ N GQ C++ I+ + Y G
Sbjct: 265 EDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDP 323
Query: 200 SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK---NKLRIAPTLLLDVPRDSLI 255
+ + +++ R+ + G ++V GG R + N I PT+ DV I
Sbjct: 324 AAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTI 383
Query: 256 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 315
EEIFGP+L I+ D ED+ I N LA ++T + + + + G IN
Sbjct: 384 AQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINW 443
Query: 316 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 354
A PFGG + SG+G +G + F+ +K+VL
Sbjct: 444 YAFD---PGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 159/362 (43%), Gaps = 15/362 (4%)
Query: 2 LLIVQAK-TSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 60
LL AK TSI +VP P +V +ISPWN+P LS + A+ AG A+V+KPS
Sbjct: 105 LLQTSAKNTSIPFIALQQSLVPYP--LVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPS 162
Query: 61 EVAPASSSLLAKLVGEYMDLSSIRV-VEGAVAETSALLDQKWDKICYTGNSRVARIVMAA 119
E+AP + L + +L + + VEG ET A L D +C+TG+ R V
Sbjct: 163 EIAPRFVAPLLXALNTVPELRDVLIFVEGG-GETGANLINYVDFVCFTGSVATGREVAET 221
Query: 120 AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDY 177
AA+ P LELGGK P + NL++A ++ WG N GQ+C+S + I +
Sbjct: 222 AARRFIPAYLELGGKDPAIVLESANLELATSAIL---WGAVVNTGQSCLSIERIYVAESK 278
Query: 178 APXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG---E 233
PL E + I+ ++ + D G ++H G E
Sbjct: 279 FEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVE 338
Query: 234 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 293
PT+ +V + +EE FGP+ P+ +E++ + N L+A +F
Sbjct: 339 ELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFA 398
Query: 294 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH-GKFSFDVFSHKKA 352
++ + ++AG + IND A+ H SG+G G F K+A
Sbjct: 399 GSEDEALKVARQLNAGAISINDAALTAXXHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQA 458
Query: 353 VL 354
L
Sbjct: 459 FL 460
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 175/351 (49%), Gaps = 15/351 (4%)
Query: 16 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 75
+ ++IV EP GVV I+PWNYP L + + A+A G +LV+KPSE+ P ++ + +L+
Sbjct: 162 TESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELME 221
Query: 76 EY-MDLSSIRVVEGAVAETSALLD--QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELG 132
E +I ++ GA +E ++ ++ D + +TG + +M AA ++T + LELG
Sbjct: 222 EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELG 281
Query: 133 GKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXX 191
GK+P ++FD + ++A + + G + + GQ C + I+
Sbjct: 282 GKNPNIIFDDA-DFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKK 339
Query: 192 FYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLR----IAPT 244
N ++ ++ ++++ H ++ +D K G I GG+R D++ L+ PT
Sbjct: 340 IKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPT 399
Query: 245 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 304
++ + I+ EE+FGP++ + + +++ + N LA +F+ + Q+
Sbjct: 400 VITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVAN 459
Query: 305 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 355
+ G + IND H P+GG ++SG+G GK + + K +L+
Sbjct: 460 KLKLGTVWIND--FHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILT 508
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 155/336 (46%), Gaps = 10/336 (2%)
Query: 25 FGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 81
GV I PWN+PF L + A+ GN +V+KPSE P ++ AK+V E +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 82 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 141
++ + G + K + TG+ +MA AAK++T V LELGGK+P +
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD 262
Query: 142 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 201
+L++A + ++ + N+GQ C + + K NP E
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 202 DLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMS 257
D++ ++N+ R+ + + G ++ GG+ + K PTLLLDV ++ IM
Sbjct: 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMH 381
Query: 258 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 317
EE FGP+LP++ D +ED+ + N L + ++T N + + ++ + G IN
Sbjct: 382 EETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINREN 441
Query: 318 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
A+ G ++SG+G GK + + V
Sbjct: 442 FE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQVV 475
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 155/336 (46%), Gaps = 10/336 (2%)
Query: 25 FGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 81
GV I PWN+PF L + A+ GN +V+KPSE P ++ AK+V E +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 82 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 141
++ + G + K + TG+ +MA AAK++T V LELGGK+P +
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVXLELGGKAPAIVMD 262
Query: 142 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 201
+L++A + ++ + N+GQ C + + K NP E
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 202 DLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMS 257
D++ ++N+ R+ + + G ++ GG+ + K PTLLLDV ++ IM
Sbjct: 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMH 381
Query: 258 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 317
EE FGP+LP++ D +ED+ + N L + ++T N + + ++ + G IN
Sbjct: 382 EETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINREN 441
Query: 318 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
A+ G ++SG+G GK + + V
Sbjct: 442 FE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQVV 475
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 164/353 (46%), Gaps = 17/353 (4%)
Query: 18 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV--- 74
A ++ +P GV +I+PWN+P + V A+AAG +V+KP+E P S+ LA+L
Sbjct: 140 ALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQA 199
Query: 75 ----GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLE 130
G Y + R V E + D KI +TG++ +I++ AA + V +E
Sbjct: 200 GIPSGVYNVIPCSRKNAKEVGE-AICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSME 258
Query: 131 LGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY--APXXXXXXXX 187
LGG +P +VFDS N+ A + K+ N GQ C+ + + + A
Sbjct: 259 LGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTCVCSNQFLVQRGIHDAFVKAFAEAM 316
Query: 188 XXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK-NKLRIAPTL 245
G E ++N ++ K ++D G +V GG+R + K PTL
Sbjct: 317 KKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTL 376
Query: 246 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 305
L +V +D L EE FGPL P++ D E++ I N+ LA Y ++ + + E
Sbjct: 377 LCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQ 436
Query: 306 VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 358
+ G + +N+ + PFGGV++SG+G K+ D + K V G
Sbjct: 437 LEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 487
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 155/336 (46%), Gaps = 10/336 (2%)
Query: 25 FGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 81
GV I PWN+PF L + A+ GN +V+KPSE P ++ AK+V E +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 82 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 141
++ + G + K + TG+ +MA AAK++T V LELGGK+P +
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD 262
Query: 142 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 201
+L++A + ++ + N+GQ C + + K NP E
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 202 DLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMS 257
D++ ++N+ R+ + + G ++ GG+ + K PTLLLDV ++ IM
Sbjct: 322 DIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMH 381
Query: 258 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 317
EE FGP+LP++ D +E++ + N L + ++T N + + ++ + G IN
Sbjct: 382 EETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINREN 441
Query: 318 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
A+ G ++SG+G GK + + V
Sbjct: 442 FE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQVV 475
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 152/338 (44%), Gaps = 10/338 (2%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GV I PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E
Sbjct: 151 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPG 210
Query: 82 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVV 138
+ +V G A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP +
Sbjct: 211 VVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNI 270
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
S ++ A + + N GQ C + +D NP
Sbjct: 271 IMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPF 329
Query: 199 ESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLI 255
+SK + V+ F ++ ++ K G + GG I PT+ DV I
Sbjct: 330 DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTI 389
Query: 256 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 315
EEIFGP++ IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 390 AKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNC 449
Query: 316 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
V A PFGG + SG G G++ ++ K V
Sbjct: 450 YDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 485
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 152/338 (44%), Gaps = 10/338 (2%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GV I PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPG 216
Query: 82 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVV 138
+ +V G A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP +
Sbjct: 217 VVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNI 276
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
S ++ A + + N GQ C + +D NP
Sbjct: 277 IMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPF 335
Query: 199 ESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLI 255
+SK + V+ F ++ ++ K G + GG I PT+ DV I
Sbjct: 336 DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTI 395
Query: 256 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 315
EEIFGP++ IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 396 AKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNC 455
Query: 316 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
V A PFGG + SG G G++ ++ K V
Sbjct: 456 YDVFGA--QSPFGGYKMSGSGQELGEYGLQAYTEVKTV 491
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 152/338 (44%), Gaps = 10/338 (2%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GV I PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPG 216
Query: 82 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVV 138
+ +V G A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP +
Sbjct: 217 VVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNI 276
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
S ++ A + + N GQ C + +D NP
Sbjct: 277 IMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPF 335
Query: 199 ESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLI 255
+SK + V+ F ++ ++ K G + GG I PT+ DV I
Sbjct: 336 DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTI 395
Query: 256 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 315
EEIFGP++ IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 396 AKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNC 455
Query: 316 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
V A PFGG + SG G G++ ++ K V
Sbjct: 456 YDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 157/339 (46%), Gaps = 12/339 (3%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GV I PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPG 216
Query: 82 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVV 138
+ +V G A + + DK+ +TG++ + R++ +AA + +L V L+LGGKSP +
Sbjct: 217 VVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKSPNI 276
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
S ++ A + + N GQ+C + +D NP
Sbjct: 277 IMSDADMDWAVEQAHFALF-FNQGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVGNPF 335
Query: 199 ESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG--ERDKNKLRIAPTLLLDVPRDSL 254
+SK + V+ F ++ ++ K G K++ GG D+ I PT+ DV
Sbjct: 336 DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYF-IQPTVFGDVQDGMT 394
Query: 255 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 314
I EEIFGP++ IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 395 IAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN 454
Query: 315 DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
V A PFGG + SG G G++ ++ K V
Sbjct: 455 CYDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 151/338 (44%), Gaps = 10/338 (2%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GV I PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPG 216
Query: 82 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVV 138
+ +V G A + + DK+ + G++ + R++ +AA + +L V LELGGKSP +
Sbjct: 217 VVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNI 276
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
S ++ A + + N GQ C + +D NP
Sbjct: 277 IMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPF 335
Query: 199 ESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLI 255
+SK + V+ F ++ ++ K G + GG I PT+ DV I
Sbjct: 336 DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTI 395
Query: 256 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 315
EEIFGP++ IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 396 AKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNC 455
Query: 316 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
V A PFGG + SG G G++ ++ K V
Sbjct: 456 YDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 163/341 (47%), Gaps = 16/341 (4%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GV I PWN+P L+ L + A++ GN +V+KP+E P ++ + L+ E
Sbjct: 158 EPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPG 217
Query: 82 SIRVVEG----AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP 136
+ +V G A A S+ +D DK+ +TG++ V +++ AA K +L V LELGGKSP
Sbjct: 218 VVNIVPGYGPTAGAAISSHMDV--DKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSP 275
Query: 137 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKN 196
+ + +L A G + + GQ CI+ + + + N
Sbjct: 276 CIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGN 334
Query: 197 PLESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRD 252
PL + +S+ ++ + ++ L++ K G K+ GG NK I PT+ DV D
Sbjct: 335 PL-TPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDD 393
Query: 253 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 312
I EEIFGP+ I+ ++D N+ L+A +FTN+ + +G +
Sbjct: 394 MRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVW 453
Query: 313 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
+N +V A PFGG + SG G G++ F ++ K V
Sbjct: 454 VNCYSVVSA--QCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 160/342 (46%), Gaps = 14/342 (4%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E +
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 82 SIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 138
V+ G+ E L + +KI +TG + + VMA A++ L V +ELGGKSP++
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 259
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
+L A +M + ++GQ C + + + +P
Sbjct: 260 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 318
Query: 199 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKN-----KLRIAPTLLLDVPR 251
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 319 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 378
Query: 252 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 311
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 379 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 438
Query: 312 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
IN A +P GG ++SG+G +G + ++ K+V
Sbjct: 439 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 160/342 (46%), Gaps = 14/342 (4%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E +
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 82 SIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 138
V+ G+ E L + +KI +TG + + VMA A++ L V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
+L A +M + ++GQ C + + + +P
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 199 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKN-----KLRIAPTLLLDVPR 251
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 252 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 311
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 380 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 439
Query: 312 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
IN A +P GG ++SG+G +G + ++ K+V
Sbjct: 440 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 156/342 (45%), Gaps = 17/342 (4%)
Query: 24 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 82
P GVV+ I+ WN+P L+ + A+ GN +VLKP++ P +++ L ++ E +
Sbjct: 148 PRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGV 207
Query: 83 IRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 140
+ V+ G + L + I TG++ + + +A+++TPV+LELGGK+P+V
Sbjct: 208 LNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVM 267
Query: 141 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLES 200
+L A + G++ N GQ C + + +P+++
Sbjct: 268 DDADLDKAAEDALWGRFA-NCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDA 326
Query: 201 -KDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG------ERDKNKLRIAPTLLLDVPRDS 253
+ N + ++ + G V G E + PT+L+DV +D+
Sbjct: 327 DSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDN 386
Query: 254 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 313
+++ EE FGP+LPI+ V +E + + N L+AY+ T + Q + + G + I
Sbjct: 387 IVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYI 446
Query: 314 ND--TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
N H H+ G ++SG G GKF + + KK V
Sbjct: 447 NRGMGEQHQGFHN----GWKQSGFGGEDGKFGLEQYLEKKTV 484
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 163/353 (46%), Gaps = 17/353 (4%)
Query: 18 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV--- 74
A ++ +P GV +I+PWN+P + V A+AAG +V+KP+E P S+ LA+L
Sbjct: 140 ALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQA 199
Query: 75 ----GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLE 130
G Y + R V E + D KI +TG++ +I++ AA + V +E
Sbjct: 200 GIPSGVYNVIPCSRKNAKEVGE-AICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSME 258
Query: 131 LGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY--APXXXXXXXX 187
LGG +P +VFDS N+ A + K+ N GQ + + + + A
Sbjct: 259 LGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTAVCSNQFLVQRGIHDAFVKAFAEAM 316
Query: 188 XXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK-NKLRIAPTL 245
G E ++N ++ K ++D G +V GG+R + K PTL
Sbjct: 317 KKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTL 376
Query: 246 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 305
L +V +D L EE FGPL P++ D E++ I N+ LA Y ++ + + E
Sbjct: 377 LCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQ 436
Query: 306 VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 358
+ G + +N+ + PFGGV++SG+G K+ D + K V G
Sbjct: 437 LEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 487
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GV I PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPG 216
Query: 82 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVV 138
+ +V G A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP +
Sbjct: 217 VVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNI 276
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
S ++ A + + N GQ C + +D NP
Sbjct: 277 IMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPF 335
Query: 199 ESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLI 255
+SK + V+ F ++ ++ K G + GG I PT+ DV I
Sbjct: 336 DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTI 395
Query: 256 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 315
EEIFGP++ IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 396 AKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNC 455
Query: 316 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 347
V A PFGG + SG G G++ +
Sbjct: 456 YDVFGA--QSPFGGYKMSGSGRELGEYGLQAY 485
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 154/343 (44%), Gaps = 13/343 (3%)
Query: 20 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 78
+V E GV +I+PWN+P + + A AAG+ +VLKPSE P ++ +LA++ + +
Sbjct: 135 VVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGV 194
Query: 79 DLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 136
+V G A L + K +TG+ + AAK V LELGGKSP
Sbjct: 195 PKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAAKDFKKVSLELGGKSP 254
Query: 137 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKN 196
+ +++K A + GK N GQ C + ++ N
Sbjct: 255 YIVLDDVDIKEAAK-ATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGN 313
Query: 197 PLES-KDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIA----PTLLLDVP 250
P E + I++ F ++ ++ G ++ +GG L PT+ ++V
Sbjct: 314 PREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVD 373
Query: 251 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 310
I EEIFGP+ ++T + ++++ I N LA Y+ +K+ + ++ AG
Sbjct: 374 NQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGT 433
Query: 311 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
+ IN+ LPFGG ++SG+G G + + F K++
Sbjct: 434 VEINEAGRK---PDLPFGGYKQSGLGREWGDYGIEEFLEVKSI 473
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 158/339 (46%), Gaps = 13/339 (3%)
Query: 24 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 82
P GV + I WNYP ++ A+ AGNA+V KPSE P + +A+++ E +
Sbjct: 150 PLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGL 209
Query: 83 IRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 140
V++G +T LL D K+ TG+ R V AAAA HL V +ELGGKSP++
Sbjct: 210 FNVIQGD-RDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVF 268
Query: 141 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE- 199
+++ A ++G + ++GQ C + + K +PL+
Sbjct: 269 DDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDY 327
Query: 200 SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKN----KLRIAPTLLLDVPRDSL 254
+ L +V+ ++ ++ K G ++ GG N + PT+ DV D
Sbjct: 328 ATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMT 387
Query: 255 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 314
I EEIFGP++ +L D ++ N+ LA +FT + + V+ + AG L IN
Sbjct: 388 IAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWIN 447
Query: 315 DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
+L +PFGG ++SG G + + + +S K V
Sbjct: 448 --TYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 484
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 151/338 (44%), Gaps = 10/338 (2%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GV I PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPG 216
Query: 82 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVV 138
+ +V G A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP +
Sbjct: 217 VVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNI 276
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
S ++ A + + N GQ + +D NP
Sbjct: 277 IMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPF 335
Query: 199 ESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLI 255
+SK + V+ F ++ ++ K G + GG I PT+ DV I
Sbjct: 336 DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTI 395
Query: 256 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 315
EEIFGP++ IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 396 AKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNC 455
Query: 316 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
V A PFGG + SG G G++ ++ K V
Sbjct: 456 YDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 151/338 (44%), Gaps = 10/338 (2%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GV I PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPG 216
Query: 82 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVV 138
+ +V G A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP +
Sbjct: 217 VVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNI 276
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
S ++ A + + N GQ + +D NP
Sbjct: 277 IMSDADMDWAVEQAHFALF-FNQGQCXCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPF 335
Query: 199 ESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLI 255
+SK + V+ F ++ ++ K G + GG I PT+ DV I
Sbjct: 336 DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTI 395
Query: 256 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 315
EEIFGP++ IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 396 AKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNC 455
Query: 316 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
V A PFGG + SG G G++ ++ K V
Sbjct: 456 YDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 153/335 (45%), Gaps = 11/335 (3%)
Query: 20 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS---SLLAKLVGE 76
+V EP GV I+PWN+P + V A+AAG +V+KP+E P S+ + LA+ G
Sbjct: 144 VVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGV 203
Query: 77 YMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 136
+ S+ + + T + K+ +TG++ V R++MA +A + + LELGG +P
Sbjct: 204 PKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAP 263
Query: 137 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-IITTKDYAPXXXXXXXXXXXXFYG 194
+VFD +L A I K+ NNGQ C+ + + + Y G
Sbjct: 264 FIVFDDA-DLDAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVG 321
Query: 195 KNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK-NKLRIAPTLLLDVPRD 252
+ L ++N ++ + D G ++ GG+R PT+L V D
Sbjct: 322 RGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPD 381
Query: 253 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 312
+ EE FGPL P+ E+ + N LAAYL++ + + E + G +
Sbjct: 382 MDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVG 441
Query: 313 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 347
IN + V PFGGV++SG+G + D +
Sbjct: 442 INTGLISNEVA--PFGGVKQSGLGREGSHYGIDDY 474
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 156/342 (45%), Gaps = 12/342 (3%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GV I PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E
Sbjct: 156 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPG 215
Query: 82 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVV 138
+ V+ G A + + DK+ +TG++ V ++ AA K +L V LE+GGKSP +
Sbjct: 216 VVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNI 275
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 197
S ++ A + + N GQ C + +D YA G NP
Sbjct: 276 IMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVG-NP 333
Query: 198 LESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSL 254
+S+ + V+ F ++ + K G K++ GG ++ I PT+ D+
Sbjct: 334 FDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAADRGYFIQPTVFGDLQDGMT 393
Query: 255 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 314
I EEIFGP++ IL +E+ N+ LAA +FT + + + AG + +N
Sbjct: 394 IAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVN 453
Query: 315 DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 356
V A PFGG + SG G G++ ++ K V R
Sbjct: 454 CYDVFGA--QSPFGGYKLSGSGRELGEYGLQAYTEVKTVTVR 493
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 149/328 (45%), Gaps = 12/328 (3%)
Query: 24 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 82
P GV + ISPWN+ + + V I GN +VLKP+ P ++ +++ + +
Sbjct: 172 PMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGV 231
Query: 83 IRVVEGAVAET-SALLDQ-KWDKICYTGNSRVA-RIVMAAA-----AKHLTPVLLELGGK 134
I V G+ AE L+D K I +TG+ V R+ AA HL V++E+GGK
Sbjct: 232 INYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGK 291
Query: 135 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYG 194
VV D +L +A +++ +G + GQ C + + KD
Sbjct: 292 DTVVVDRDADLDLAAESILVSAFGFS-GQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350
Query: 195 KNPLESKD-LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRD 252
+P + + +++ F ++ ++ K G+++ GGE D + I PT++ D+ +
Sbjct: 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPE 410
Query: 253 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 312
++IM EEIFGP++ + + + +I N+ L + T N+ +Q G L
Sbjct: 411 AVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLY 470
Query: 313 INDTAVHLAVHSLPFGGVQESGMGAYHG 340
N V PFGG + SG + G
Sbjct: 471 FNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 159/342 (46%), Gaps = 14/342 (4%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E +
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 82 SIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 138
V+ G+ E L + +KI +TG + + VMA A++ L V + LGGKSP++
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGKSPLI 259
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
+L A +M + ++GQ C + + + +P
Sbjct: 260 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 318
Query: 199 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKN-----KLRIAPTLLLDVPR 251
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 319 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 378
Query: 252 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 311
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 379 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 438
Query: 312 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
IN A +P GG ++SG+G +G + ++ K+V
Sbjct: 439 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 157/349 (44%), Gaps = 25/349 (7%)
Query: 20 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS---SLLAKLVGE 76
++ +P GV I+PWN+P + A+AAG ++++P+++ P ++ +LA+ G
Sbjct: 164 VIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAG- 222
Query: 77 YMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 134
+ +++V G E A L + K+ +TG++ V R++MA A + + LELGG
Sbjct: 223 -IPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGN 281
Query: 135 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFY 193
+P + +L A ++ K+ N GQ C+ + I + Y
Sbjct: 282 APFIVFDDADLDAAVDGAMVSKYR-NAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKV 340
Query: 194 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRD 252
G + ++ ++ ++D G K++ GG ++ L P +L V D
Sbjct: 341 GNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGG-KELGGLFFEPGILTGVTSD 399
Query: 253 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG--- 309
L+ EE FGPL P+ D E+ N LAAY +T N + E + G
Sbjct: 400 MLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVG 459
Query: 310 ---GLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 355
GL+ N+ A PFGGV++SG+G K+ + + K + S
Sbjct: 460 HNTGLISNEVA--------PFGGVKQSGLGREGSKYGIEEYLETKYICS 500
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 163/346 (47%), Gaps = 22/346 (6%)
Query: 24 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 82
P G V II+PWN P +LS + A+A GN +VLKP+E +P +++ LA+++ E DL
Sbjct: 162 PAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKE-ADLPPG 220
Query: 83 -IRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 139
+V+G E A L + TG + +IVM AA HL + ELGGKSP +
Sbjct: 221 VFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALV 280
Query: 140 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 199
+ +L+ A ++ + NG+ C + ++ + +PL+
Sbjct: 281 FADADLERALDAVVFQIFSF-NGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLD 339
Query: 200 SK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---------IAPTLLLD 248
+ ++ +++ H R+ ++ K G +++ GGER K R + PT+ +
Sbjct: 340 PETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG 399
Query: 249 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 308
I EEIFGP+L + E++ N LAAY+FT + + + + A
Sbjct: 400 -ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEA 458
Query: 309 GGLVINDTAV-HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
G + +N V HL PFGGV+ SG G ++ D ++ K +
Sbjct: 459 GMVYLNSHNVRHLPT---PFGGVKGSGDRREGGTYALDFYTDLKTI 501
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 159/342 (46%), Gaps = 14/342 (4%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E +
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 82 SIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 138
V+ G+ E L + +KI +TG + + VMA A++ L V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
+L A +M + ++GQ + + + +P
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVATNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 199 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKN-----KLRIAPTLLLDVPR 251
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 252 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 311
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 380 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 439
Query: 312 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
IN A +P GG ++SG+G +G + ++ K+V
Sbjct: 440 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 152/335 (45%), Gaps = 8/335 (2%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP G+VL ISP+NYP L+ + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 82 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 139
+ G +E + Q + I +TG++ + + A + P++LELGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 140 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 199
+L++ + +I G +G +GQ C + ++ + A NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGY-SGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 200 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 259
D++ ++++ + L++D G + + L I P L V D + EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 260 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 319
FGP+LPI+ V +E++ +I N L A +FTN+ E + G + IN+
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQ 436
Query: 320 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 354
+ PF G ++SG G K+S + + K+V+
Sbjct: 437 RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 148/332 (44%), Gaps = 10/332 (3%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GV I PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPG 216
Query: 82 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVV 138
+ +V G A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP +
Sbjct: 217 VVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNI 276
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
S ++ A + + N GQ + +D NP
Sbjct: 277 IMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPF 335
Query: 199 ESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLI 255
+SK + V+ F ++ ++ K G + GG I PT+ DV I
Sbjct: 336 DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTI 395
Query: 256 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 315
EEIFGP++ IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 396 AKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNC 455
Query: 316 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 347
V A PFGG + SG G G++ +
Sbjct: 456 YDVFGA--QSPFGGYKMSGSGRELGEYGLQAY 485
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 159/342 (46%), Gaps = 14/342 (4%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E +
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 82 SIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 138
V+ G+ E L + +KI +TG + + VMA A++ L V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
+L A +M + ++GQ + + + +P
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVXTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 199 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKN-----KLRIAPTLLLDVPR 251
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 252 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 311
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 380 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 439
Query: 312 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
IN A +P GG ++SG+G +G + ++ K+V
Sbjct: 440 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 20/337 (5%)
Query: 19 EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY- 77
+ V P GV ++I PWN+ F + V I GN +VLKP+ AP ++ +++ E
Sbjct: 167 QYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESG 226
Query: 78 MDLSSIRVVEGAVAET-SALLDQ-KWDKICYTGNSRVARIVMAAAAK------HLTPVLL 129
+ + V G+ AE L+D K I +TG+ V + AAK HL V+
Sbjct: 227 LPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIA 286
Query: 130 ELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-IITTKDYAPXXXXXXXXX 188
E+GGK VV D ++++A + + +G GQ C + ++ K Y
Sbjct: 287 EMGGKDTVVVDEDCDIELAAQSIFTSAFGFA-GQKCSAGSRAVVHEKVYDEVLKRVIEIT 345
Query: 189 XXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLL 247
G+ + +++ F ++ ++ K G++V GG+ D +K I PT+
Sbjct: 346 ESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGRLVSGGKGDDSKGYFIEPTIFA 405
Query: 248 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK----KLKQQFV 303
D+ + +M EEIFGP++ V +++ ++ N+ L + T N+ + KQ+F
Sbjct: 406 DLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEF- 464
Query: 304 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 340
G L N V PFGG + SG + G
Sbjct: 465 ---HVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 153/340 (45%), Gaps = 14/340 (4%)
Query: 20 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 79
I +P GVV I+PWNYP +++ + A+AAGN +VLKPSE+ P ++ LA+L +
Sbjct: 155 IRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFP 214
Query: 80 LSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 137
+ ++ G L K + TG+ +++ A + +ELGGK+PV
Sbjct: 215 AGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPV 274
Query: 138 -VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGK 195
VFD V G + N GQ C + I K Y G
Sbjct: 275 IVFDDADIEAVVEGVRTFGYY--NAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGA 332
Query: 196 NPLESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDK-NKLRIAPTLLLDVPRD 252
ES +L + + H R+ K +++ K +G K++ GGE+ K N APTLL +D
Sbjct: 333 PDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQD 392
Query: 253 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 312
I+ +E+FGP++ + D E + N LA+ ++T + + + G
Sbjct: 393 DAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTW 452
Query: 313 INDTAVHLAVHSLPFGGVQESGMG---AYHGKFSFDVFSH 349
+N + V +P GG + SG G + +G + V H
Sbjct: 453 VNTH--FMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRH 490
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 151/339 (44%), Gaps = 12/339 (3%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GV I PWN+P L+ + A+ GN +V+KP+E P S+ + L+ E
Sbjct: 156 EPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPG 215
Query: 82 SIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVV 138
+ ++ G A + DKI +TG++ V +++ AA + +L V LELGGKSP +
Sbjct: 216 VVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNI 275
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 197
+ +L A + G + N GQ C + I + Y G
Sbjct: 276 IFADADLDYAVEQAHQGVF-FNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPF 334
Query: 198 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER--DKNKLRIAPTLLLDVPRDSLI 255
+ + ++ + ++ +L+ G + G + + I PT+ +V D I
Sbjct: 335 DPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRI 394
Query: 256 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 315
EEIFGP+ IL +++ + N+ L A +FTN+ + AG + IN
Sbjct: 395 AKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWIN- 453
Query: 316 TAVHLAVHSL-PFGGVQESGMGAYHGKFSFDVFSHKKAV 353
+ A+++ PFGG + SG G G+F +S K V
Sbjct: 454 --CYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTV 490
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 152/335 (45%), Gaps = 8/335 (2%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP G+VL ISP+NYP L+ + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 82 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 139
+ G +E + Q + I ++G++ + + A + P++LELGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 140 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 199
+L++ + +I G +G +GQ C + ++ + A NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGY-SGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 200 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 259
D++ ++++ + L++D G + + L I P L V D + EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 260 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 319
FGP+LPI+ V +E++ +I N L A +FTN+ E + G + IN+
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQ 436
Query: 320 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 354
+ PF G ++SG G K+S + + K+V+
Sbjct: 437 RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 151/335 (45%), Gaps = 8/335 (2%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP G+VL ISP+NYP L+ + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 82 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 139
+ G +E + Q + I +TG++ + + A + P++L LGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLALGGKDSAIV 259
Query: 140 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 199
+L++ + +I G +G +GQ C + ++ + A NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGY-SGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 200 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 259
D++ ++++ + L++D G + + L I P L V D + EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 260 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 319
FGP+LPI+ V +E++ +I N L A +FTN+ E + G + IN+
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQ 436
Query: 320 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 354
+ PF G ++SG G K+S + + K+V+
Sbjct: 437 RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 151/335 (45%), Gaps = 8/335 (2%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP G+VL ISP+NYP L+ + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 82 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 139
+ G +E + Q + I +TG++ + + A + P++LELGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 140 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 199
+L++ + +I G +G +GQ + ++ + A NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGY-SGQRSTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 200 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 259
D++ ++++ + L++D G + + L I P L V D + EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 260 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 319
FGP+LPI+ V +E++ +I N L A +FTN+ E + G + IN+
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQ 436
Query: 320 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 354
+ PF G ++SG G K+S + + K+V+
Sbjct: 437 RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 158/340 (46%), Gaps = 21/340 (6%)
Query: 20 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYM 78
++ +P GV I+PWN+P + A+AAG +VLKP+ P S+ LA+L + +
Sbjct: 141 VIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGV 200
Query: 79 DLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 136
VV G+ L K+ +TG++ + R +M AK + V LELGG +P
Sbjct: 201 PAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 260
Query: 137 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGK 195
+VFD +L A + K+ N GQ C+ + + +
Sbjct: 261 FIVFDDA-DLDKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIG 318
Query: 196 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG---ERDKNKLRIAPTLLLDVP 250
+ L++ + +++ A++ + + D G ++V GG ER N + PT+L+DVP
Sbjct: 319 DGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQ--PTILVDVP 376
Query: 251 RDSLIMSEEIFGPLLPILTVDKIEDSFDII---NSGTKPLAAYLFTNNKKLKQQFVETVS 307
++ + EE FGPL P+ + +D D+I N LAAY + + + E +
Sbjct: 377 ANAKVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALE 433
Query: 308 AGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 347
G + IN + V PFGG++ SG+G K+ + +
Sbjct: 434 YGIVGINTGIISNEV--APFGGIKASGLGREGSKYGIEDY 471
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 158/340 (46%), Gaps = 21/340 (6%)
Query: 20 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYM 78
++ +P GV I+PWN+P + A+AAG +VLKP+ P S+ LA+L + +
Sbjct: 141 VIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGV 200
Query: 79 DLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 136
VV G+ L K+ +TG++ + R +M AK + V LELGG +P
Sbjct: 201 PAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 260
Query: 137 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGK 195
+VFD +L A + K+ N GQ C+ + + +
Sbjct: 261 FIVFDDA-DLDKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIG 318
Query: 196 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG---ERDKNKLRIAPTLLLDVP 250
+ L++ + +++ A++ + + D G ++V GG ER N + PT+L+DVP
Sbjct: 319 DGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQ--PTILVDVP 376
Query: 251 RDSLIMSEEIFGPLLPILTVDKIEDSFDII---NSGTKPLAAYLFTNNKKLKQQFVETVS 307
++ + EE FGPL P+ + +D D+I N LAAY + + + E +
Sbjct: 377 ANAKVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALE 433
Query: 308 AGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 347
G + IN + V PFGG++ SG+G K+ + +
Sbjct: 434 YGIVGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDY 471
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 154/346 (44%), Gaps = 16/346 (4%)
Query: 24 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 82
P G ++I+PWN+P + +VG +A GN ++ KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 83 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 133
+ + G E A L + + I +TG+ V + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 134 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXF 192
K+ ++ D + +A +++ +G GQ C + +I T+ Y P
Sbjct: 292 KNAIIVDETADFDLAAEGVVVSAYGFQ-GQKCSAASRLILTQGAYEPVLERVLKRAERLS 350
Query: 193 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPR 251
G E+ DL +V++ ++ ++ K G++V GG+R + IAPT+ +VP
Sbjct: 351 VGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPP 409
Query: 252 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 311
+ I EEIFGP+L ++ V ++ ++ N L +++ ++ + G L
Sbjct: 410 KARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNL 469
Query: 312 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 356
N V PFGG + SG A G + +F KAV R
Sbjct: 470 YFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 153/346 (44%), Gaps = 16/346 (4%)
Query: 24 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 82
P G ++I+PWN+P + +VG +A GN ++ KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 83 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 133
+ + G E A L + + I +TG+ V + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 134 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXF 192
K ++ D + +A +++ +G GQ C + +I T+ Y P
Sbjct: 292 KDAIIVDETADFDLAAEGVVVSAYGFQ-GQKCSAASRLILTQGAYEPVLERVLKRAERLS 350
Query: 193 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPR 251
G E+ DL +V++ ++ ++ K G++V GG+R + IAPT+ +VP
Sbjct: 351 VGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPP 409
Query: 252 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 311
+ I EEIFGP+L ++ V ++ ++ N L +++ ++ + G L
Sbjct: 410 KARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNL 469
Query: 312 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 356
N V PFGG + SG A G + +F KAV R
Sbjct: 470 YFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 157/341 (46%), Gaps = 16/341 (4%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 81
EP GV +I PWN P +L + A+ GN +++KP+E P ++ +A L+ E
Sbjct: 158 EPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPG 217
Query: 82 SIRVVEG----AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP 136
+ +V G A A S+ +D DK+ +TG++ V +++ AAAK +L V LELG K+P
Sbjct: 218 VVNIVPGYGPTAGAAISSHMDV--DKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNP 275
Query: 137 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKN 196
+ + +L A G + N GQ+CI+ + + + N
Sbjct: 276 CIVFADADLDSAVEFAHQGVF-TNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGN 334
Query: 197 PLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDS 253
PL + +N ++ +L++ K G K+ GG NK I PT+ +V D
Sbjct: 335 PLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDM 394
Query: 254 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 313
I EEIFGP+ I+ +++ N+ L A +FT + + AG + +
Sbjct: 395 RIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWV 454
Query: 314 NDTAVHLAVHSL-PFGGVQESGMGAYHGKFSFDVFSHKKAV 353
N +LA + P GG + SG G G++ ++ K V
Sbjct: 455 N---CYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKTV 492
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 150/345 (43%), Gaps = 14/345 (4%)
Query: 24 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 82
P G ++I+PWN+P + +VG +A GN ++ KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 83 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 133
+ + G E A L + + I +TG+ V + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 134 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFY 193
K ++ D + +A +++ +G + + I+T Y P
Sbjct: 292 KDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKRAERLSV 351
Query: 194 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRD 252
G E+ DL +V++ ++ ++ K G++V GG+R + IAPT+ +VP
Sbjct: 352 GPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPK 410
Query: 253 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 312
+ I EEIFGP+L ++ V ++ ++ N L +++ ++ + G L
Sbjct: 411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY 470
Query: 313 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 356
N V PFGG + SG A G + +F KAV R
Sbjct: 471 FNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 160/333 (48%), Gaps = 10/333 (3%)
Query: 26 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--I 83
GVV +ISPWN+P LS+ V A+A GNA+V+KP+ P + ++ + E + + I
Sbjct: 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVI 209
Query: 84 RVVEGAVAET-SALLDQKWDK-ICYTGNSRVARIV--MAAAAKHLTPVLLELGGKSPVVF 139
V GA +E + K I +TG++ V R V +A + V LELGG +P V
Sbjct: 210 STVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVV 269
Query: 140 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP-L 198
+ ++ A + +G + + GQ C+S + +I +P
Sbjct: 270 LADADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSA 328
Query: 199 ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSE 258
E + ++N + + L + ++ K G V + +L + P + DV D I E
Sbjct: 329 EGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRL-VHPHVFSDVTSDMEIARE 387
Query: 259 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 318
EIFGPL+ +L D + ++ N+ L+A +++ + QF + +G + IND V
Sbjct: 388 EIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTV 447
Query: 319 HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 351
+ H + FGG + SG+G ++G ++ + F+ +
Sbjct: 448 NDEPHVM-FGGSKNSGLGRFNGDWAIEEFTTDR 479
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 157/350 (44%), Gaps = 34/350 (9%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 82
+ GVV +I+PWN+P V+ A+ AG +VLKPSE+AP S+ L A+++ E S
Sbjct: 160 DAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSG 219
Query: 83 I-RVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGK-SPVV 138
+ ++ G A + L D I +TG++R + + A+ L V LELGGK + ++
Sbjct: 220 VFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANII 279
Query: 139 F-DSGIN-LKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGK 195
F D+ I+ L+ R N+GQ+C +P ++ + Y G
Sbjct: 280 FADADIDALQRGVRHCFY-----NSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGP 334
Query: 196 NPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG-------ERDKNKLRIAPTLLL 247
+ +V+ + ++ L+ G +V GG ER + PT+
Sbjct: 335 GHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERG---YYVRPTVFA 391
Query: 248 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 307
DV I EEIFGP+L +L + +++ + N L Y+ + ++ ++ V
Sbjct: 392 DVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVR 451
Query: 308 AGGLVINDTAVHLAVHSLP----FGGVQESGMGAYHGKFSFDVFSHKKAV 353
+G + +N H LP FGGV+ SG G + F KA+
Sbjct: 452 SGMVEVNG-------HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 144/320 (45%), Gaps = 14/320 (4%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 82
EP GVVL ISP+NYP L+ + A+ GN +V KP+ S K+V D +
Sbjct: 151 EPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSG---IKMVEALADAGA 207
Query: 83 ----IRVV--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 136
I+VV G+V + D I +TG + + A + PV+LELGGK P
Sbjct: 208 PEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA--KMIPVVLELGGKDP 265
Query: 137 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKN 196
+ +LK+ +++ G + +GQ C + + A +
Sbjct: 266 AIVLDDADLKLTASQIVSGAFSY-SGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS 324
Query: 197 PLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIM 256
P + D++ +++ A + L+DD +G + G + + L ++PTLL DV +
Sbjct: 325 PEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNL-LSPTLLDDVTPAMRVA 383
Query: 257 SEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 316
EE FGP+LPI+ V ++ + N L A +FT + + + G + IN
Sbjct: 384 WEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAK 443
Query: 317 AVHLAVHSLPFGGVQESGMG 336
H PF GV++SG+G
Sbjct: 444 TERGPDH-FPFLGVKKSGLG 462
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 154/345 (44%), Gaps = 22/345 (6%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 81
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 82 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 138
+ ++ G+ + L D KI +TG++ V + +M + A ++ V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
+ +L A +M M N G+ CI+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 199 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 250
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 251 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 308
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 309 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
G + IN + + PFGG ++SG G G+ + + + K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 8/335 (2%)
Query: 24 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 83
P GV+L I PWN+P L V + AGN+ +LK + + +A+++ E + +
Sbjct: 126 PLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGV 185
Query: 84 RVVEGAVAE--TSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 141
A E + + D + + TG+ R + A A L +LELGG P + +
Sbjct: 186 YGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLN 245
Query: 142 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ES 200
+L++A + + G++ N GQ C + I + A +PL E
Sbjct: 246 DADLELAVKAAVAGRYQ-NTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEE 304
Query: 201 KDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-IAPTLLLDVPRDSLIMSE 258
DL + L + + G +++ GGE+ + A T+L DV D +
Sbjct: 305 NDLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQ 364
Query: 259 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 318
E+FGP+ I + + N L+A +FT + L + + GG+ IN +
Sbjct: 365 ELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFINGYSA 424
Query: 319 HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
A + FGGV++SG G F F + + V
Sbjct: 425 SDA--RVAFGGVKKSGFGRELSHFGLHEFCNVQTV 457
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 154/345 (44%), Gaps = 22/345 (6%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 81
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 82 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 138
+ ++ G+ + L D KI +TG++ V + +M + A ++ V L+LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLI 296
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
+ +L A +M M N G+ CI+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 199 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 250
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 251 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 308
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 309 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
G + IN + + PFGG ++SG G G+ + + + K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 156/351 (44%), Gaps = 23/351 (6%)
Query: 15 PSSAEIVP--------EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 66
P++ E +P +P G+V I+PWNYP + AI GN +V KPSE P +
Sbjct: 144 PAAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLT 203
Query: 67 SSLLAKLVGEYMDLSSIRVVEGAVAET--SALLDQ-KWDKICYTGNSRVARIVMAAAAKH 123
+ LA+L+ + + + V+ G ET +AL++ K + TG+ + V+AAAAK
Sbjct: 204 ALKLARLIADILPEGVVNVITGR-GETVGNALINHPKVGXVSITGDIATGKKVLAAAAKT 262
Query: 124 LTPVLLELGGKSPVVFDSGINLKVACRRM-IMGKWGCNNGQACISPDHIITTKD-YAPXX 181
+ LELGGK+PV+ +L+ + G + N GQ C + I Y
Sbjct: 263 VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYY--NAGQDCTAACRIYAEAGIYEKLV 320
Query: 182 XXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDD--DKVSGKIVHGGERDKNK- 238
Y + ++ +++ R++ ++ D+ +I GG ++
Sbjct: 321 ADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEG 380
Query: 239 LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 298
PT++ ++ I+ E+FGP++ + +D+ N LA+ ++T +
Sbjct: 381 FFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISK 440
Query: 299 KQQFVETVSAGGLVINDTAVHLAV-HSLPFGGVQESGMGAYHGKFSFDVFS 348
+ + G IN H + + P GG+++SG G ++ + ++
Sbjct: 441 AXRAASRLQYGCTWIN---THFXLTNEXPHGGIKQSGYGKDXSVYALEDYT 488
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 153/345 (44%), Gaps = 22/345 (6%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 81
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 82 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 138
+ ++ G+ + L D KI +TG++ V + +M + A ++ V L LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
+ +L A +M M N G+ CI+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 199 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 250
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 251 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 308
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 309 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
G + IN + + PFGG ++SG G G+ + + + K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 160/335 (47%), Gaps = 12/335 (3%)
Query: 24 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS-EVAPASSSLLAKLVGEYMDLSS 82
P GV+ ISP+N+P LS+ + AIA GN++V KP + A + +++AK E+ L +
Sbjct: 143 PLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAF-EHAGLPA 201
Query: 83 --IRVVEGAVAET-SALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 138
+ V+ V E +L + I +TG++ V R + A + + LELGG +P
Sbjct: 202 GVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFA 261
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 197
S ++ A I GK+ + GQ C+ + II +D Y YG
Sbjct: 262 VLSDADVDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQT 320
Query: 198 LESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIM 256
+ ++N + ++++ K G ++ G+R N L P + + +S I
Sbjct: 321 DPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVL--TPYVFVGADNNSKIA 378
Query: 257 SEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 316
E+F P+ I+ +++ D+ N L++ +FT++ + ++F + +G +ND
Sbjct: 379 QTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQ 438
Query: 317 AVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 351
+V+ + + + FGG + SG+G + + + F+ K
Sbjct: 439 SVNDSPN-IAFGGNKASGVGRFGNPWVVEEFTVTK 472
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 153/345 (44%), Gaps = 22/345 (6%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 81
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 82 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 138
+ ++ G+ + L D KI +TG++ V + +M + A ++ V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
+ +L A +M M N G+ I+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 199 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 250
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 251 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 308
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 309 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
G + IN + + PFGG ++SG G G+ + + + K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 153/345 (44%), Gaps = 22/345 (6%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 81
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 82 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 138
+ ++ G+ + L D KI +TG++ V + +M + A ++ V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
+ +L A +M M N G+ I+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 199 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 250
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 251 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 308
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 309 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
G + IN + + PFGG ++SG G G+ + + + K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 152/345 (44%), Gaps = 22/345 (6%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 81
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 82 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 138
+ ++ G+ + L D KI +TG++ V + +M + A ++ V L LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
+ +L A +M M N G+ I+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 199 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 250
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 251 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 308
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 309 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353
G + IN + + PFGG ++SG G G+ + + + K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 151/341 (44%), Gaps = 10/341 (2%)
Query: 24 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 82
P GVV I+P+N+P ++ AIA GN +LKPSE P + L +L + +
Sbjct: 141 PIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGV 200
Query: 83 IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 141
VV GA + +L+ K I + G+ V V +++L V G K+ + +
Sbjct: 201 FNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLN 260
Query: 142 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 201
NL+ ++ +G + G+ C++ + + A N L+
Sbjct: 261 DANLEDTVTNIVGAAFG-SAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDG 319
Query: 202 -DLSRIVNSNHFAR-LSKLLDDDKVSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMS 257
L ++ ++ R LS + + ++V G + + + PT+ +V + I
Sbjct: 320 VFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWK 379
Query: 258 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 317
+EIF P+L ++ V ++++ +I N A LFT+N + F E + AG L IN
Sbjct: 380 DEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGIN-LG 438
Query: 318 VHLAVHSLPFGGVQESGMGAYH--GKFSFDVFSHKKAVLSR 356
V + PF G + S G H GK S D ++ KK V +R
Sbjct: 439 VPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 145/343 (42%), Gaps = 13/343 (3%)
Query: 24 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL--S 81
P GV +I PWN+P + A+AAG V+KP+ P + V + +DL
Sbjct: 147 PVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLTXIAFFS-VXDKLDLPDG 205
Query: 82 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 139
+ +V G + +L + D + +TG++ V R ++ A+ + + LELGG +P +
Sbjct: 206 XVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIV 265
Query: 140 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXF-YGKNPL 198
+L+ A +I K+ GQ C+ + I + A G
Sbjct: 266 FDDADLEAAADNLIANKFR-GGGQTCVCANRIFVHEKVADAFGQKLAERVNKXTVGDGXN 324
Query: 199 ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLI 255
+ D+ ++N F ++ + L D G + G++ + L PT++ V R+
Sbjct: 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREXCC 384
Query: 256 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 315
EE FGPL+P E+ D N LA+Y+FT + + Q+ + G + N
Sbjct: 385 YQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNT 444
Query: 316 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 358
PFGG + SG+G G F + V RGF
Sbjct: 445 GTG--PTPEAPFGGXKASGIGREGGLEGLFEFVEAQTV-PRGF 484
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 136/336 (40%), Gaps = 14/336 (4%)
Query: 9 TSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 68
T + + +A + + GV+ PWN+P + GN ++LK + P S++
Sbjct: 108 TKLNSDLGNAYYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAA 167
Query: 69 LLAKLVGEYM--DLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTP 126
L AK++ + S I + + D + + TG+ R V AA K+L
Sbjct: 168 LTAKIIKRAGAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKK 227
Query: 127 VLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXX 186
ELGG + + +V R ++ N+GQ C S II K
Sbjct: 228 STXELGGNDAFIVLDDADPQV-LRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELK 286
Query: 187 XXXXXFYGKNPLESKDLSRIVNSNHF-----ARLSKLLDDDKVSGKIVHG-GERDKNKLR 240
+PLE+ NS A++ + +D K+ + E D
Sbjct: 287 NVFSNLKAGDPLEADTTLPPXNSEKAKEKLEAQVKEAID---AGAKVFYQYPEIDSKGAF 343
Query: 241 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 300
PT+L D+ +D+ + +E+FGP+ + V+ + + N + L + + ++ +
Sbjct: 344 FRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAK 403
Query: 301 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 336
+ + G VIN + LPFGG+++SG G
Sbjct: 404 KVSAQIETGXTVIN--GRWITSGELPFGGIKKSGYG 437
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 145/331 (43%), Gaps = 14/331 (4%)
Query: 13 TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 72
T + + EP GVV I+P+NYP +++ + + GNA+V+KPS P +++ K
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 73 LV---GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVL 128
+ G D ++ + G AE + D + + +TG++ V R+V K +
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---V 261
Query: 129 LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXX 187
+ELGG P + +L +A ++ G + GQ C + ++ + Y
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKR 320
Query: 188 XXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL- 246
G + D+ +++ + + ++D G V G R + PTL+
Sbjct: 321 LSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVE 380
Query: 247 --LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 304
D +D ++ E+F P+ + V ++ + ++ N L A +F + ++ V
Sbjct: 381 APADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 305 TVSAGGLVINDTAVHLAVHSLPFGGVQESGM 335
+ G + IND H + PFGG ++SG+
Sbjct: 441 LLEVGAIYINDMPRH-GIGYYPFGGRKKSGV 470
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 145/331 (43%), Gaps = 14/331 (4%)
Query: 13 TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 72
T + + EP GVV I+P+NYP +++ + + GNA+V+KPS P +++ K
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 73 LV---GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVL 128
+ G D ++ + G AE + D + + +TG++ V R+V K +
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---V 261
Query: 129 LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXX 187
+ELGG P + +L +A ++ G + GQ C + ++ + Y
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKR 320
Query: 188 XXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL- 246
G + D+ +++ + + ++D G V G R + PTL+
Sbjct: 321 LSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVE 380
Query: 247 --LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 304
D +D ++ E+F P+ + V ++ + ++ N L A +F + ++ V
Sbjct: 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 305 TVSAGGLVINDTAVHLAVHSLPFGGVQESGM 335
+ G + IND H + PFGG ++SG+
Sbjct: 441 LLEVGAIYINDMPRH-GIGYYPFGGRKKSGV 470
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 144/331 (43%), Gaps = 14/331 (4%)
Query: 13 TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 72
T + + EP GVV I+P+NYP +++ + + GNA+V+KPS P +++ K
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 73 LV---GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVL 128
+ G D ++ + G AE + D + + +TG++ V R+V K +
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---V 261
Query: 129 LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXX 187
+ELGG P + +L +A ++ G + GQ C + ++ + Y
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKR 320
Query: 188 XXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL- 246
G + D+ +++ + + ++D G V G R + PT +
Sbjct: 321 LSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTFVE 380
Query: 247 --LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 304
D +D ++ E+F P+ + V ++ + ++ N L A +F + ++ V
Sbjct: 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 305 TVSAGGLVINDTAVHLAVHSLPFGGVQESGM 335
+ G + IND H + PFGG ++SG+
Sbjct: 441 LLEVGAIYINDMPRH-GIGYYPFGGRKKSGV 470
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 141/350 (40%), Gaps = 18/350 (5%)
Query: 21 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MD 79
+ +P G+ I+P+N+P + AIA GNA +LKPSE P+ LA+L E +
Sbjct: 159 IRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLAELXIEAGLP 218
Query: 80 LSSIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 138
+ VV G A+L + + G++ +AR V AA + G K+ +
Sbjct: 219 AGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQCFGGAKNHXI 278
Query: 139 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 198
+L A +I +G + G+ C + + + P
Sbjct: 279 IXPDADLDQAANALIGAGYG-SAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIGPY 337
Query: 199 --ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD------KNKLRIAPTLLLDV 249
E D +V R+ L+D G K+V G RD +N I L DV
Sbjct: 338 TDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDG-RDFKLQGYENGHFIGGCLFDDV 396
Query: 250 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 309
D I EIFGP+L ++ E++ + ++T + + F ++ G
Sbjct: 397 TPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINIG 456
Query: 310 GLVIN-DTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSR 356
+ +N V LA HS FGG + S G HG S ++ K + SR
Sbjct: 457 XVGVNVPIPVPLAYHS--FGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 135/321 (42%), Gaps = 13/321 (4%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL-LAKLVGEYMDLS 81
+P GVV + P+N+P L +V A+ AGN +V KPSE+ P + L L + +
Sbjct: 138 KPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAG 197
Query: 82 SIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVF 139
+ +V+G AL + D + +TG+SR ++ + +L LE GG +P+V
Sbjct: 198 VLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEXGGNNPLVV 257
Query: 140 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD------YAPXXXXXXXXXXXXFY 193
+ +L A +I + + GQ C ++ + A F
Sbjct: 258 EEVADLDAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFD 316
Query: 194 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDS 253
+ + + + H + + L + D L + P +LDV +
Sbjct: 317 EQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDGAAL-LTPG-ILDVSAVA 374
Query: 254 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 313
EE FGPLL ++ + N+ LAA L +++++ +QF+ S G+V
Sbjct: 375 ERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFL-VESRAGIVN 433
Query: 314 NDTAVHLAVHSLPFGGVQESG 334
+ + A S PFGG+ SG
Sbjct: 434 WNKQLTGAASSAPFGGIGASG 454
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 150/351 (42%), Gaps = 12/351 (3%)
Query: 24 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 83
P G+V II+ +N+P + A+ GN + K + P +S + K+V E ++ +++
Sbjct: 155 PVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNL 214
Query: 84 ------RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 137
GA T+ D++ D + +TG++ V ++V + LLELGG + +
Sbjct: 215 PGAICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGNNAI 274
Query: 138 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 197
+ +L + + G GQ C + ++ + +P
Sbjct: 275 IVFEDADLNLVVPSAVFASVG-TAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIGDP 333
Query: 198 LESKDLSRIVNSNHF--ARLSKLLDDDKVSGKIVHGGE-RDKNKLRIAPTLLLDVPRDSL 254
+ L +++ L+ + + G +V GG+ D+ + PT++ + D+
Sbjct: 334 WDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTIITGLAHDAP 393
Query: 255 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN-KKLKQQFVETVSAGGLVI 313
I+ E F P+L +L E++F N + L++ +FT + ++ + S G+V
Sbjct: 394 IVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSDCGIVN 453
Query: 314 NDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPV 364
+ A FGG + +G G G S+ + +++ + + D+P+
Sbjct: 454 VNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQY-MRRSTCTINYSKDLPL 503
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 131/329 (39%), Gaps = 12/329 (3%)
Query: 23 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MD 79
EP GV +I+PWN+P +S+ AI GN +V KPS + L +L E
Sbjct: 665 EPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEG 724
Query: 80 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKH-----LTPVLLELGG 133
+ + G+V + I +TG+ RI+ AA H + ++ E+GG
Sbjct: 725 VFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGG 784
Query: 134 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXF 192
K+ ++ D +L A ++ +G GQ C + +I Y
Sbjct: 785 KNAIIIDDDADLDEAVPHVLYSAFGF-QGQKCSACSRVIVLDAVYDKFIERLVSMAKATK 843
Query: 193 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP-TLLLDVPR 251
G + + + + + + + + K G +++ + P T++ +
Sbjct: 844 VGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKP 903
Query: 252 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 311
+ I EEIFGP+L ++ + + + NS L +F+ + + + G L
Sbjct: 904 EHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNL 963
Query: 312 VINDTAVHLAVHSLPFGGVQESGMGAYHG 340
IN V PFGG + SG+G G
Sbjct: 964 YINRNNTGALVERQPFGGARMSGVGTKAG 992
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 138/324 (42%), Gaps = 14/324 (4%)
Query: 26 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIR 84
GV + ISPWN+P + L V A+ AGN++V KP+E P + L+ E + S++
Sbjct: 651 GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALY 710
Query: 85 VVEGAVAETSALLDQKWD--KICYTGNSRVAR-IVMAAAAKH--LTPVLLELGGKSPVVF 139
+V G A L D + +TG++ VAR I A AAK + P++ E GG + ++
Sbjct: 711 LVTGD-GRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIA 769
Query: 140 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 199
D+ + ++ + + GQ C + + +D A +P +
Sbjct: 770 DATALPEQVADDVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSD 828
Query: 200 -SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSE 258
+ + +++ RL + K ++ G + +AP + ++ ++E
Sbjct: 829 VATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCF-VAPHIFELT--EAGQLTE 885
Query: 259 EIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 316
E+FGP+L ++ + +E I L + + + ++ V G + +N
Sbjct: 886 EVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRN 945
Query: 317 AVHLAVHSLPFGGVQESGMGAYHG 340
+ V PFGG SG G G
Sbjct: 946 MIGAVVGVQPFGGNGLSGTGPKAG 969
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 26 GVVLIISPWNYPFLLSLDPVVGAIA-AGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSI 83
G V ISP+N+ + + GA A GN ++ KPS+ A +S + +++ E + + I
Sbjct: 202 GFVAAISPFNFTAIGG--NLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNII 259
Query: 84 RVV--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLT-----PVLL-ELGGKS 135
+ V +G + + I +TG+ + + A++L P L E GGK+
Sbjct: 260 QFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKN 319
Query: 136 PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGK 195
S ++ + + GQ C + + K P
Sbjct: 320 FHFVHSSADVDSVVSGTLRSAFE-YGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVG 378
Query: 196 NPLES--KDLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVP 250
+P E S ++++ FAR+ K L+ + S I+ GG+ +++ + P ++
Sbjct: 379 DPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKD 438
Query: 251 RDSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV- 306
IM EEIFGP+L + DK ++ +++S T L +F +K + Q+ +
Sbjct: 439 PQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLR 498
Query: 307 -SAGGLVINDTAVHLAVHSLPFGGVQESG 334
+AG IND + V PFGG + SG
Sbjct: 499 NAAGNFYINDKSTGSVVGQQPFGGARASG 527
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 203 LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 259
S ++++ FAR+ K L+ + S I+ GG+ D + + P ++ IM EE
Sbjct: 391 FSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEE 450
Query: 260 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 314
IFGP+L + DK +++ +++S T L +F+ +K + Q+ + + +AG IN
Sbjct: 451 IFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 315 DTAVHLAVHSLPFGGVQESG 334
D + V PFGG + SG
Sbjct: 511 DKSTGSIVGQQPFGGARASG 530
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 203 LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 259
S ++++ FAR+ K L+ + S I+ GG+ D + + P ++ IM EE
Sbjct: 391 FSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEE 450
Query: 260 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 314
IFGP+L + DK +++ +++S T L +F+ +K + Q+ + + +AG IN
Sbjct: 451 IFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 315 DTAVHLAVHSLPFGGVQESG 334
D + V PFGG + SG
Sbjct: 511 DKSTGSIVGQQPFGGARASG 530
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 203 LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 259
S ++++ FAR+ K L+ + S I+ GG+ D + + P ++ IM EE
Sbjct: 391 FSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEE 450
Query: 260 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 314
IFGP+L + DK +++ +++S T L +F+ +K + Q+ + + +AG IN
Sbjct: 451 IFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 315 DTAVHLAVHSLPFGGVQESG 334
D + V PFGG + SG
Sbjct: 511 DKSTGSIVGQQPFGGARASG 530
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 136/337 (40%), Gaps = 11/337 (3%)
Query: 24 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 83
P G+V II+ +N+P + A+ GN + K + S + K++ + ++ + +
Sbjct: 157 PVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKL 216
Query: 84 ------RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 137
GA T+ D++ + + +TG+++V + V + LLELGG + +
Sbjct: 217 PGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAI 276
Query: 138 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 197
+ +L + + G GQ C + + + NP
Sbjct: 277 IAFEDADLSLVVPSALFAAVG-TAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNP 335
Query: 198 LESKDLSRIVNSNHFAR--LSKLLDDDKVSGKIVHGGE-RDKNKLRIAPTLLLDVPRDSL 254
+ L +++ L + + K G +V+GG+ D+ + PT++ + D+
Sbjct: 336 WDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDAS 395
Query: 255 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN-KKLKQQFVETVSAGGLVI 313
I E F P+L + E+ F N + L++ +FT + ++ + S G+V
Sbjct: 396 IAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVN 455
Query: 314 NDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 350
+ A FGG + +G G G ++ + +
Sbjct: 456 VNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRR 492
>pdb|2H5G|A Chain A, Crystal Structure Of Human Pyrroline-5-carboxylate
Synthetase
pdb|2H5G|B Chain B, Crystal Structure Of Human Pyrroline-5-carboxylate
Synthetase
Length = 463
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 19 EIVPEPFGVVLII---SPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 75
E V P GV+L+I P P + +L AIA+GN L+LK + A S+ +L L
Sbjct: 135 EQVTVPIGVLLVIFESRPDCLPQVAAL-----AIASGNGLLLKGGKEAAHSNRILHLLTQ 189
Query: 76 EYMDLSSIR-----VVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAA 120
E + + ++ V E LD+ D I G+S++ R + AA
Sbjct: 190 EALSIHGVKEAVQLVNTREEVEDLCRLDKXIDLIIPRGSSQLVRDIQKAA 239
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 16 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 75
S+ ++ GV L I+ +N+P + A+ +G +++KP A A++ L ++V
Sbjct: 143 SAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVA 199
Query: 76 EYMDL-----SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVL 128
+ +D ++ ++ G+ ++ LLDQ +D + +TG++ A + A P
Sbjct: 200 DVVDAGILPPGALSIICGS---SAGLLDQIRSFDVVSFTGSADTAATLRA------HPAF 250
Query: 129 LELGGKSPVVFDSGINLKVAC 149
++ G + V DS +N + C
Sbjct: 251 VQRGARLNVQADS-LNSAILC 270
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 16 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 75
S+ ++ GV L I+ +N+P + A+ +G +++KP A A++ L ++V
Sbjct: 143 SAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVA 199
Query: 76 EYMDL-----SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVL 128
+ +D ++ ++ G+ ++ LLDQ +D + +TG++ A + A P
Sbjct: 200 DVVDAGILPPGALSIICGS---SAGLLDQIRSFDVVSFTGSADTAATLRA------HPAF 250
Query: 129 LELGGKSPVVFDSGINLKVAC 149
++ G + V DS +N + C
Sbjct: 251 VQRGARLNVEADS-LNSAILC 270
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 16 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 75
S+ ++ GV L I+ +N+P + A+ +G +++KP A A++ L ++V
Sbjct: 141 SAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVA 197
Query: 76 EYMDL-----SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVL 128
+ +D ++ ++ G+ ++ LLDQ +D + +TG++ A + A P
Sbjct: 198 DVVDAGILPPGALSIICGS---SAGLLDQIRSFDVVSFTGSADTAATLRA------HPAF 248
Query: 129 LELGGKSPVVFDSGINLKVAC 149
++ G + V DS +N + C
Sbjct: 249 VQRGARLNVEADS-LNSAILC 268
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 16 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 75
S+ ++ GV L I+ +N+P + A+ +G +++KP A A++ L ++V
Sbjct: 143 SAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVA 199
Query: 76 EYMDL-----SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVL 128
+ +D ++ ++ G+ ++ LLDQ +D + +TG++ A + A P
Sbjct: 200 DVVDAGILPPGALSIICGS---SAGLLDQIRSFDVVSFTGSADTAATLRA------HPAF 250
Query: 129 LELGGKSPVVFDSGINLKVAC 149
++ G + V DS +N + C
Sbjct: 251 VQRGARLNVEADS-LNSAILC 270
>pdb|1V04|A Chain A, Serum Paraoxonase By Directed Evolution
pdb|3SRE|A Chain A, Serum Paraoxonase-1 By Directed Evolution At Ph 6.5
pdb|3SRG|A Chain A, Serum Paraoxonase-1 By Directed Evolution At Ph 6.5 In
Complex With 2- Hydroxyquinoline
Length = 355
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 19 EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM 78
EI+P G+ I S YP ++S DP +G L++ +E PA S L +++G +
Sbjct: 56 EILPN--GLAFISSGLKYPGIMSFDP----DKSGKILLMDLNEKEPAVSEL--EIIGNTL 107
Query: 79 DLSSIR 84
D+SS
Sbjct: 108 DISSFN 113
>pdb|4GHK|A Chain A, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|B Chain B, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|C Chain C, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|D Chain D, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
Length = 444
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 24 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 76
P GV+ II + +++D + +GNA +L+ A S++ LAKL+GE
Sbjct: 137 PLGVIGII--YESRPNVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGE 187
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 65/165 (39%), Gaps = 24/165 (14%)
Query: 21 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 80
+ EP G++ I P P ++ + ++ N ++ P A S++ AKLV +D
Sbjct: 100 IAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV---LDA 156
Query: 81 SSIRVVEGAVAETSALLDQ----------KWDKICY---TGNSRVARIVMAAAAKHLTPV 127
+ V GA + +DQ K D I TG + AA P
Sbjct: 157 A---VAAGAPKDIIGWIDQPSVELSNALXKHDDIALILATGGPGXVK----AAYSSGKPA 209
Query: 128 LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 172
+ G PVV D ++K A ++ K +NG C S +I
Sbjct: 210 IGVGAGNVPVVIDETADIKRAVASVLXSKT-FDNGVVCASEQAVI 253
>pdb|2WYB|B Chain B, The Quorum Quenching N-Acyl Homoserine Lactone Acylase
Pvdq With A Covalently Bound Dodecanoic Acid
pdb|2WYC|B Chain B, The Quorum Quenching N-Acyl Homoserine Lactone Acylase
Pvdq In Complex With 3-Oxo-Lauric Acid
pdb|2WYD|B Chain B, The Quorum Quenching N-Acyl Homoserine Lactone Acylase
Pvdq In Complex With Dodecanoic Acid
pdb|2WYE|B Chain B, The Quorum Quenching N-Acyl Homoserine Lactone Acylase
Pvdq Is An Ntn-Hydrolase With An Unusual
Substrate-Binding Pocket
pdb|3L91|B Chain B, Structure Of Pseudomonas Aerugionsa Pvdq Bound To
Octanoate
pdb|3L94|B Chain B, Structure Of Pvdq Covalently Acylated With Myristate
pdb|3SRA|B Chain B, Structure Of Pseudomonas Aerugionsa Pvdq Covalently
Acylated With Myristic Acid From Pvdiq
pdb|3SRB|B Chain B, Structure Of Pseudomonas Aeruginosa Pvdq Bound To Smer28
pdb|3SRC|B Chain B, Structure Of Pseudomonas Aeruginosa Pvdq Bound To Ns2028
Length = 546
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 194 GKNPLESKDLSRIVNSNHFARLSKLLDD 221
GK PLE+K L +V +NH ++L D
Sbjct: 307 GKQPLEAKTLEEMVTANHVFSADQVLPD 334
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,491,609
Number of Sequences: 62578
Number of extensions: 469719
Number of successful extensions: 1456
Number of sequences better than 100.0: 96
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1139
Number of HSP's gapped (non-prelim): 103
length of query: 398
length of database: 14,973,337
effective HSP length: 101
effective length of query: 297
effective length of database: 8,652,959
effective search space: 2569928823
effective search space used: 2569928823
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)