Query 015920
Match_columns 398
No_of_seqs 197 out of 1659
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 04:50:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015920.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015920hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sza_A Aldehyde dehydrogenase, 100.0 3E-87 1E-91 678.9 39.5 362 8-375 104-468 (469)
2 2wme_A BADH, betaine aldehyde 100.0 2.5E-85 8.5E-90 666.8 39.3 342 14-358 132-484 (490)
3 3iwj_A Putative aminoaldehyde 100.0 3.7E-83 1.3E-87 654.6 38.3 342 14-358 141-490 (503)
4 3ed6_A Betaine aldehyde dehydr 100.0 6.3E-83 2.1E-87 654.0 38.8 341 15-358 161-511 (520)
5 3ros_A NAD-dependent aldehyde 100.0 1E-82 3.5E-87 647.6 37.3 341 14-358 113-459 (484)
6 4f3x_A Putative aldehyde dehyd 100.0 7.4E-83 2.5E-87 650.8 35.9 340 14-356 151-496 (498)
7 3ifg_A Succinate-semialdehyde 100.0 5.5E-83 1.9E-87 650.0 34.4 339 15-356 139-483 (484)
8 3u4j_A NAD-dependent aldehyde 100.0 1.6E-82 5.5E-87 652.1 36.9 341 15-358 152-499 (528)
9 3r31_A BADH, betaine aldehyde 100.0 6.2E-83 2.1E-87 653.6 33.5 343 18-363 144-494 (517)
10 3rh9_A Succinate-semialdehyde 100.0 1.3E-82 4.6E-87 649.6 35.8 341 15-358 137-485 (506)
11 3ek1_A Aldehyde dehydrogenase; 100.0 6.6E-83 2.3E-87 651.5 33.2 339 15-357 159-502 (504)
12 1wnd_A Putative betaine aldehy 100.0 4.9E-82 1.7E-86 644.3 37.9 338 16-356 151-494 (495)
13 3lns_A Benzaldehyde dehydrogen 100.0 5E-82 1.7E-86 639.8 37.2 345 5-356 111-456 (457)
14 3k2w_A Betaine-aldehyde dehydr 100.0 3.2E-82 1.1E-86 646.8 35.1 342 14-358 138-489 (497)
15 3b4w_A Aldehyde dehydrogenase; 100.0 3.2E-82 1.1E-86 646.1 34.8 336 17-356 139-481 (495)
16 4e4g_A Methylmalonate-semialde 100.0 4.5E-82 1.6E-86 647.8 36.0 341 15-357 153-505 (521)
17 3qan_A 1-pyrroline-5-carboxyla 100.0 3.6E-82 1.2E-86 650.8 35.2 342 15-357 163-516 (538)
18 3i44_A Aldehyde dehydrogenase; 100.0 1.2E-81 4E-86 641.8 38.3 336 15-355 151-496 (497)
19 2o2p_A Formyltetrahydrofolate 100.0 4.9E-82 1.7E-86 647.0 35.5 337 17-356 171-516 (517)
20 1bxs_A Aldehyde dehydrogenase; 100.0 9.8E-82 3.3E-86 642.9 37.5 339 15-356 150-495 (501)
21 1a4s_A ALDH, betaine aldehyde 100.0 1.3E-81 4.4E-86 642.8 38.2 339 16-357 147-496 (503)
22 3jz4_A Succinate-semialdehyde 100.0 1.4E-81 4.9E-86 640.3 38.0 339 15-356 136-480 (481)
23 1o04_A Aldehyde dehydrogenase, 100.0 6.3E-82 2.1E-86 644.2 34.8 339 16-357 150-495 (500)
24 2d4e_A 5-carboxymethyl-2-hydro 100.0 2.9E-81 9.8E-86 641.9 39.0 339 15-357 153-505 (515)
25 3prl_A NADP-dependent glyceral 100.0 7.5E-82 2.6E-86 644.4 34.4 336 16-357 144-483 (505)
26 2imp_A Lactaldehyde dehydrogen 100.0 3.2E-81 1.1E-85 637.3 38.9 339 15-356 133-478 (479)
27 2ve5_A BADH, betaine aldehyde 100.0 1E-80 3.5E-85 635.6 39.0 342 14-358 132-484 (490)
28 4h7n_A Aldehyde dehydrogenase; 100.0 4E-81 1.4E-85 635.9 35.7 348 17-366 119-472 (474)
29 3pqa_A Lactaldehyde dehydrogen 100.0 2.8E-81 9.7E-86 637.3 34.6 335 15-357 121-464 (486)
30 1uzb_A 1-pyrroline-5-carboxyla 100.0 6.2E-81 2.1E-85 640.0 37.2 339 16-356 165-515 (516)
31 3etf_A Putative succinate-semi 100.0 4.7E-81 1.6E-85 634.0 35.9 340 15-357 117-461 (462)
32 3r64_A NAD dependent benzaldeh 100.0 1E-80 3.5E-85 637.3 38.2 340 15-358 139-486 (508)
33 1uxt_A Glyceraldehyde-3-phosph 100.0 6.4E-81 2.2E-85 637.3 34.6 335 17-357 150-492 (501)
34 2j6l_A Aldehyde dehydrogenase 100.0 1E-80 3.5E-85 636.1 35.9 338 17-356 150-498 (500)
35 2w8n_A Succinate-semialdehyde 100.0 3.3E-81 1.1E-85 637.8 31.9 339 15-356 137-485 (487)
36 4dng_A Uncharacterized aldehyd 100.0 1.2E-80 4.1E-85 634.3 33.3 339 15-357 134-478 (485)
37 1euh_A NADP dependent non phos 100.0 5.2E-80 1.8E-84 627.8 34.6 334 16-356 134-473 (475)
38 1t90_A MMSDH, probable methylm 100.0 7.1E-80 2.4E-84 628.2 35.3 340 15-357 132-480 (486)
39 3ty7_A Putative aldehyde dehyd 100.0 4.3E-80 1.5E-84 629.2 31.4 336 16-355 131-475 (478)
40 4e3x_A Delta-1-pyrroline-5-car 100.0 7.5E-79 2.6E-83 627.7 33.9 348 17-367 193-560 (563)
41 4f9i_A Proline dehydrogenase/d 100.0 8.6E-77 2.9E-81 644.0 35.0 343 15-358 657-1011(1026)
42 3ju8_A Succinylglutamic semial 100.0 1.8E-76 6.2E-81 603.7 33.1 334 15-357 130-471 (490)
43 2y53_A Aldehyde dehydrogenase 100.0 3.4E-76 1.2E-80 607.5 29.3 336 18-357 144-519 (534)
44 3haz_A Proline dehydrogenase; 100.0 3.1E-75 1E-79 630.6 34.7 340 15-358 640-988 (1001)
45 3v4c_A Aldehyde dehydrogenase 100.0 5.6E-73 1.9E-77 582.8 26.9 329 16-354 161-515 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 6.4E-72 2.2E-76 572.7 29.7 325 17-354 129-480 (510)
47 1vlu_A Gamma-glutamyl phosphat 100.0 7.2E-69 2.5E-73 543.7 22.3 313 15-371 117-449 (468)
48 3k9d_A LMO1179 protein, aldehy 100.0 1.5E-67 5E-72 534.9 23.3 322 14-356 98-448 (464)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 8.1E-67 2.8E-71 528.1 20.5 305 16-373 132-446 (463)
50 4ghk_A Gamma-glutamyl phosphat 100.0 9.1E-66 3.1E-70 518.7 22.6 298 15-358 128-440 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 5.8E-65 2E-69 510.4 21.9 295 16-358 117-423 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 1.6E-63 5.6E-68 503.6 20.1 313 16-357 95-449 (452)
53 4gic_A HDH, histidinol dehydro 96.3 0.85 2.9E-05 44.3 22.4 258 14-353 119-399 (423)
54 1kae_A HDH, histidinol dehydro 93.0 7.2 0.00025 37.9 25.4 259 15-353 114-392 (434)
55 2fiu_A Conserved hypothetical 63.8 18 0.00061 27.5 6.3 57 208-283 16-74 (99)
56 3v42_A Folliculin; tumor suppr 51.9 24 0.00083 31.2 5.9 66 41-111 20-85 (226)
57 3lo3_A Uncharacterized conserv 45.7 90 0.0031 23.1 7.6 58 208-284 15-74 (94)
58 1s7i_A Hypothetical protein PA 42.5 68 0.0023 25.3 6.7 28 258-286 81-108 (124)
59 3hhl_A RPA0582; alpha-beta-bar 32.6 1.4E+02 0.0048 24.1 7.2 62 206-283 45-108 (143)
60 1b93_A Protein (methylglyoxal 32.3 59 0.002 26.8 4.9 114 26-162 12-135 (152)
61 2yvq_A Carbamoyl-phosphate syn 24.0 42 0.0014 27.2 2.5 60 72-131 61-132 (143)
62 2ioj_A Hypothetical protein AF 20.0 49 0.0017 26.3 2.2 44 81-124 53-98 (139)
No 1
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=3e-87 Score=678.87 Aligned_cols=362 Identities=47% Similarity=0.827 Sum_probs=338.5
Q ss_pred CCCcccCCCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCCcEEEe
Q 015920 8 KTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVE 87 (398)
Q Consensus 8 ~~~~~~~~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~alp~g~v~~v~ 87 (398)
.......+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+++++++++||+|++|+++
T Consensus 104 ~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~alP~gvv~vv~ 183 (469)
T 3sza_A 104 EKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVIN 183 (469)
T ss_dssp CCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHHSCTTTSCBCC
T ss_pred CccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCcceEEEEE
Confidence 33334455678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHhHHHHHhcCCCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCcccc
Q 015920 88 GAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 167 (398)
Q Consensus 88 g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a 167 (398)
|+.+.+.+|+.|++|+|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++
T Consensus 184 g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a 262 (469)
T 3sza_A 184 GGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVA 262 (469)
T ss_dssp CSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTS
T ss_pred CCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCCC
Confidence 9888888898889999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCeEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHhcCeeeecCccCCCCccccceEe
Q 015920 168 PDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL 246 (398)
Q Consensus 168 ~~~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Ptvl 246 (398)
++|||||++++|+|+++|++++++++ |+|.+ .+++||++++++++++++++ +|+++++||..+..|+|++|||+
T Consensus 263 ~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~~~~g~~~~PTvl 337 (469)
T 3sza_A 263 PDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTGDAATRYIAPTIL 337 (469)
T ss_dssp CCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCEETTTTEECCEEE
T ss_pred CcEEEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCccCCCCceeCCeee
Confidence 99999999999999999999999985 77766 89999999999999999999 47899999987667999999999
Q ss_pred ecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCC
Q 015920 247 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 326 (398)
Q Consensus 247 ~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~p 326 (398)
.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+...+...+.+|
T Consensus 338 ~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~P 417 (469)
T 3sza_A 338 TDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLP 417 (469)
T ss_dssp ESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSC
T ss_pred cCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999986555678999
Q ss_pred ccccCCCCCCCcchHHHHHhhhhceEEEEeCCCCC--CCccCCCCChhHHH
Q 015920 327 FGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGD--VPVRYPPYTKGKLR 375 (398)
Q Consensus 327 fGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~--~~~~~~p~~~~~~~ 375 (398)
|||+|.||+|+++|.+|+++||+.|+|++++.+.+ .+++||||+..|.+
T Consensus 418 fGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~~~~~ 468 (469)
T 3sza_A 418 FGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ 468 (469)
T ss_dssp BCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC----
T ss_pred cCCccccccCccchHHHHHHhhCeeEEEECCcccccccccccCCCCccccc
Confidence 99999999999999999999999999999987655 57899999886654
No 2
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.5e-85 Score=666.81 Aligned_cols=342 Identities=27% Similarity=0.429 Sum_probs=324.5
Q ss_pred CCCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015920 14 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 91 (398)
Q Consensus 14 ~~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~ 91 (398)
.+...+++|+|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+| +.+
T Consensus 132 ~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~ 211 (490)
T 2wme_A 132 ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGRE 211 (490)
T ss_dssp TTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTT
T ss_pred CCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHH
Confidence 4456789999999999999999999999999999999999999999999999999999999999 99999999999 578
Q ss_pred hHHHHHhcC-CCEEEEeCCHHHHHHHHH-HHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCC
Q 015920 92 ETSALLDQK-WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 169 (398)
Q Consensus 92 ~~~~L~~~~-v~~v~ftGs~~~g~~i~~-~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~ 169 (398)
.++.|++|+ +|+|.||||+.+|+.+.+ .+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++
T Consensus 212 ~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~-~n~GQ~C~a~~ 290 (490)
T 2wme_A 212 VGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGT 290 (490)
T ss_dssp HHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCC
T ss_pred HHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHh-ccCCCcCCCce
Confidence 899999996 999999999999988876 567789999999999999999999999999999999999 99999999999
Q ss_pred eEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccC-----CCCcccc
Q 015920 170 HIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD-----KNKLRIA 242 (398)
Q Consensus 170 ~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~~~~~~ 242 (398)
|||||++++|+|+++|+++++++++|||.+ ++++||++++.++++++++|+++.. |+++++||... ..|+|++
T Consensus 291 rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~ 370 (490)
T 2wme_A 291 RVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVA 370 (490)
T ss_dssp EEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBC
T ss_pred eeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccC
Confidence 999999999999999999999999999999 8999999999999999999999864 78999999763 2589999
Q ss_pred ceEeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCC
Q 015920 243 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAV 322 (398)
Q Consensus 243 Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~ 322 (398)
|||+.++++||++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++. ...
T Consensus 371 Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~--~~~ 448 (490)
T 2wme_A 371 PTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWG--ESP 448 (490)
T ss_dssp CEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCS--CCC
T ss_pred CEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCC--CCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999854 345
Q ss_pred CCCCccccCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 015920 323 HSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 358 (398)
Q Consensus 323 ~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 358 (398)
+.+||||+|.||+|+++|.+|+++||+.|+|+++..
T Consensus 449 ~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~g 484 (490)
T 2wme_A 449 AEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELG 484 (490)
T ss_dssp TTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred CCCCcccccccccCchhHHHHHHHhhceeEEEEECC
Confidence 789999999999999999999999999999998753
No 3
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=3.7e-83 Score=654.56 Aligned_cols=342 Identities=31% Similarity=0.504 Sum_probs=326.7
Q ss_pred CCCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015920 14 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 91 (398)
Q Consensus 14 ~~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~ 91 (398)
.+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+| +.+
T Consensus 141 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~ 220 (503)
T 3iwj_A 141 DTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPE 220 (503)
T ss_dssp TTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHH
T ss_pred CCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHH
Confidence 3457889999999999999999999999999999999999999999999999999999999999 99999999999 457
Q ss_pred hHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCe
Q 015920 92 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 170 (398)
Q Consensus 92 ~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~ 170 (398)
.++.|++|+ +|+|.||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 221 ~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 299 (503)
T 3iwj_A 221 AGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCF-WTNGQICSATSR 299 (503)
T ss_dssp HTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHT-GGGGCCTTCEEE
T ss_pred HHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCCcccCCe
Confidence 889999996 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccC---CCCccccceE
Q 015920 171 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD---KNKLRIAPTL 245 (398)
Q Consensus 171 v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~---~~~~~~~Ptv 245 (398)
||||++++|+|+++|+++++++++|||.+ ++++||+++++++++++++++++++ |+++++||... ..|+|++|||
T Consensus 300 vlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTv 379 (503)
T 3iwj_A 300 LILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTI 379 (503)
T ss_dssp EEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEE
T ss_pred eEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCee
Confidence 99999999999999999999999999998 8999999999999999999999865 78999999764 4689999999
Q ss_pred eecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCC
Q 015920 246 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 325 (398)
Q Consensus 246 l~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~ 325 (398)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.. ...+.+
T Consensus 380 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~--~~~~~~ 457 (503)
T 3iwj_A 380 ITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQ--PCFTQA 457 (503)
T ss_dssp EESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSC--CCCTTS
T ss_pred eecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCC--CCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864 346889
Q ss_pred CccccCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 015920 326 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 358 (398)
Q Consensus 326 pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 358 (398)
||||+|.||+|+++|.+++++||+.|+|+++..
T Consensus 458 PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~~ 490 (503)
T 3iwj_A 458 PWGGVKRSGFGRELGEWGLDNYLSVKQVTQYIS 490 (503)
T ss_dssp CBCCSGGGEECCBSHHHHHHTTEEEEEEEEECC
T ss_pred CcCCcCcccCCCcchHHHHHHhhCeEEEEEeCC
Confidence 999999999999999999999999999998753
No 4
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=6.3e-83 Score=654.01 Aligned_cols=341 Identities=26% Similarity=0.475 Sum_probs=327.2
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 92 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~~ 92 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+| +.+.
T Consensus 161 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~ 240 (520)
T 3ed6_A 161 DTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEV 240 (520)
T ss_dssp TEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTH
T ss_pred CCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHH
Confidence 446789999999999999999999999999999999999999999999999999999999999 99999999999 6788
Q ss_pred HHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeE
Q 015920 93 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 171 (398)
Q Consensus 93 ~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v 171 (398)
++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||
T Consensus 241 g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv 319 (520)
T 3ed6_A 241 GDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGY-FHAGQVCSAGSRI 319 (520)
T ss_dssp HHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGTSTTCCCEE
T ss_pred HHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCcccCceE
Confidence 99999996 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccC-----CCCccccce
Q 015920 172 ITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD-----KNKLRIAPT 244 (398)
Q Consensus 172 ~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~~~~~~Pt 244 (398)
|||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++++ |+++++||... ..|+|++||
T Consensus 320 lV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PT 399 (520)
T 3ed6_A 320 LVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPT 399 (520)
T ss_dssp EEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCE
T ss_pred EEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCe
Confidence 9999999999999999999999999998 8999999999999999999999865 67999999764 468999999
Q ss_pred EeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCC
Q 015920 245 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS 324 (398)
Q Consensus 245 vl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~ 324 (398)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.
T Consensus 400 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~--~~~ 477 (520)
T 3ed6_A 400 VITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY--FAQ 477 (520)
T ss_dssp EEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC--CTT
T ss_pred EEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC--CCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997654 578
Q ss_pred CCccccCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 015920 325 LPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 358 (398)
Q Consensus 325 ~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 358 (398)
+||||+|.||+|+++|.+++++||+.|+|+++..
T Consensus 478 ~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~~ 511 (520)
T 3ed6_A 478 APWGGYKQSGIGRELGKEGLEEYLVSKHILTNTN 511 (520)
T ss_dssp SCBCCSGGGEESCBSHHHHHHTTEEEEEEEEESS
T ss_pred CCcCCcCcCcCCccchHHHHHHhhceEEEEEcCC
Confidence 9999999999999999999999999999998753
No 5
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1e-82 Score=647.63 Aligned_cols=341 Identities=22% Similarity=0.369 Sum_probs=324.8
Q ss_pred CCCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeCChH-
Q 015920 14 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA- 91 (398)
Q Consensus 14 ~~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g~~~- 91 (398)
.+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+|+.+
T Consensus 113 ~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~ 192 (484)
T 3ros_A 113 DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQ 192 (484)
T ss_dssp TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHH
T ss_pred CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHH
Confidence 4567889999999999999999999999999999999999999999999999999999999999 99999999999654
Q ss_pred hHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCe
Q 015920 92 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 170 (398)
Q Consensus 92 ~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~ 170 (398)
.++ |++|+ +|+|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 193 ~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 270 (484)
T 3ros_A 193 LAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDART-YNDGQVCTSSKR 270 (484)
T ss_dssp HHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTT-GGGGCCTTSCCE
T ss_pred HHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHh-cCCCCCccCCce
Confidence 566 99985 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCcc-CCCCccccceEee
Q 015920 171 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGER-DKNKLRIAPTLLL 247 (398)
Q Consensus 171 v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~~~~~~Ptvl~ 247 (398)
||||++++|+|+++|+++++++++|||.+ ++++||+++++++++++++++++++ |+++++||.. +..|+|++|||+.
T Consensus 271 vlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~ 350 (484)
T 3ros_A 271 IIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILT 350 (484)
T ss_dssp EEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEE
T ss_pred EEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEee
Confidence 99999999999999999999999999998 8999999999999999999999865 7799999975 3579999999999
Q ss_pred cCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCc
Q 015920 248 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 327 (398)
Q Consensus 248 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pf 327 (398)
+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.. ...+.+||
T Consensus 351 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~--~~~~~~Pf 428 (484)
T 3ros_A 351 DIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRW--ITSGELPF 428 (484)
T ss_dssp CCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCC--CCCTTSCB
T ss_pred cCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCC--CCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999954 34688999
Q ss_pred cccCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 015920 328 GGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 358 (398)
Q Consensus 328 GG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 358 (398)
||+|.||+|+++|++|+++||+.|+|+++..
T Consensus 429 GG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 429 GGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp CCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred CCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 9999999999999999999999999988653
No 6
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=7.4e-83 Score=650.77 Aligned_cols=340 Identities=23% Similarity=0.413 Sum_probs=326.0
Q ss_pred CCCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCCcEEEeC-ChHh
Q 015920 14 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG-AVAE 92 (398)
Q Consensus 14 ~~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~alp~g~v~~v~g-~~~~ 92 (398)
.+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++++++|+|++|+|+| +.+.
T Consensus 151 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ealP~gv~nvv~g~~~~~ 230 (498)
T 4f3x_A 151 PGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADILPEGVVNVITGRGETV 230 (498)
T ss_dssp TTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTTSCTTSEEECCCCTTTH
T ss_pred ccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHhCCcCeEEEEeCCchHH
Confidence 355788999999999999999999999999999999999999999999999999999999999999999999999 5678
Q ss_pred HHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeE
Q 015920 93 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 171 (398)
Q Consensus 93 ~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v 171 (398)
+++|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||
T Consensus 231 g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rv 309 (498)
T 4f3x_A 231 GNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGY-YNAGQDCTAACRI 309 (498)
T ss_dssp HHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCEEEE
T ss_pred HHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHH-hcCCCCccCCceE
Confidence 99999995 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cC-eeeecCccC-CCCccccceEee
Q 015920 172 ITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SG-KIVHGGERD-KNKLRIAPTLLL 247 (398)
Q Consensus 172 ~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~-~v~~gg~~~-~~~~~~~Ptvl~ 247 (398)
|||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++++ |+ ++++||... ..|+|++|||+.
T Consensus 310 lV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~ 389 (498)
T 4f3x_A 310 YAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVA 389 (498)
T ss_dssp EEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEE
T ss_pred EecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEee
Confidence 9999999999999999999999999998 8999999999999999999999865 67 899999753 479999999999
Q ss_pred cCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCc
Q 015920 248 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 327 (398)
Q Consensus 248 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pf 327 (398)
+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+...+ .+.+||
T Consensus 390 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~--~~~~Pf 467 (498)
T 4f3x_A 390 GATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFML--TNEMPH 467 (498)
T ss_dssp SCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC--CTTSCB
T ss_pred cCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC--CCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999997654 388999
Q ss_pred cccCCCCCCCcchHHHHHhhhhceEEEEe
Q 015920 328 GGVQESGMGAYHGKFSFDVFSHKKAVLSR 356 (398)
Q Consensus 328 GG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 356 (398)
||+|.||+|+++|.+++++||+.|+|+++
T Consensus 468 GG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 468 GGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp CCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred CCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999875
No 7
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=5.5e-83 Score=650.02 Aligned_cols=339 Identities=27% Similarity=0.436 Sum_probs=324.4
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 92 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~~ 92 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+++| +.+.
T Consensus 139 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~ 218 (484)
T 3ifg_A 139 NKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAI 218 (484)
T ss_dssp TEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHH
T ss_pred CceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHH
Confidence 456789999999999999999999999999999999999999999999999999999999999 99999999998 5678
Q ss_pred HHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeE
Q 015920 93 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 171 (398)
Q Consensus 93 ~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v 171 (398)
++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||
T Consensus 219 g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rv 297 (484)
T 3ifg_A 219 GTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKY-RNNGQTCVCTNRF 297 (484)
T ss_dssp HHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEE
T ss_pred HHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCcccCCCeE
Confidence 99999996 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccCC-CCccccceEeec
Q 015920 172 ITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDK-NKLRIAPTLLLD 248 (398)
Q Consensus 172 ~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~-~~~~~~Ptvl~~ 248 (398)
|||++++|+|+++|+++++++++|||.+ ++++||+++++++++++++++++++ |+++++||.... .|+|++|||+.+
T Consensus 298 lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~ 377 (484)
T 3ifg_A 298 FVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTG 377 (484)
T ss_dssp EEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEE
T ss_pred EEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEec
Confidence 9999999999999999999999999998 8999999999999999999999865 779999997643 699999999999
Q ss_pred CCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCcc
Q 015920 249 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 328 (398)
Q Consensus 249 ~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfG 328 (398)
++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.. ...+.+|||
T Consensus 378 v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~--~~~~~~PfG 455 (484)
T 3ifg_A 378 VKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGL--ISNEVAPFG 455 (484)
T ss_dssp ECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC--CCCSSSCBC
T ss_pred CCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCC--CCCCCCCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999853 346889999
Q ss_pred ccCCCCCCCcchHHHHHhhhhceEEEEe
Q 015920 329 GVQESGMGAYHGKFSFDVFSHKKAVLSR 356 (398)
Q Consensus 329 G~~~SG~G~~~g~~~l~~~t~~k~v~~~ 356 (398)
|+|.||+|+++|.+++++||+.|+|++.
T Consensus 456 G~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 456 GVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp CEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred CcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999763
No 8
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.6e-82 Score=652.06 Aligned_cols=341 Identities=30% Similarity=0.472 Sum_probs=327.4
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 92 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~~ 92 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+| +.+.
T Consensus 152 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~ 231 (528)
T 3u4j_A 152 DRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPA 231 (528)
T ss_dssp TEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTH
T ss_pred CceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHH
Confidence 456789999999999999999999999999999999999999999999999999999999999 99999999999 6789
Q ss_pred HHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeE
Q 015920 93 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 171 (398)
Q Consensus 93 ~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v 171 (398)
+++|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||
T Consensus 232 g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rv 310 (528)
T 3u4j_A 232 GQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVY-HNAGQCCISGSRL 310 (528)
T ss_dssp HHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEE
T ss_pred HHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHh-hcCCCCCcCCCEE
Confidence 99999996 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccCC--CCccccceEee
Q 015920 172 ITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDK--NKLRIAPTLLL 247 (398)
Q Consensus 172 ~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~--~~~~~~Ptvl~ 247 (398)
|||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++++ |+++++||.... .|+|++|||+.
T Consensus 311 lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~ 390 (528)
T 3u4j_A 311 LVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFA 390 (528)
T ss_dssp EEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEE
T ss_pred EEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEe
Confidence 9999999999999999999999999998 8999999999999999999999865 779999997644 68999999999
Q ss_pred cCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCc
Q 015920 248 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 327 (398)
Q Consensus 248 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pf 327 (398)
+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+... ..+.+||
T Consensus 391 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~Pf 468 (528)
T 3u4j_A 391 GVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVID--GTPELPI 468 (528)
T ss_dssp SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSCB
T ss_pred cCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999753 3688999
Q ss_pred cccCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 015920 328 GGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 358 (398)
Q Consensus 328 GG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 358 (398)
||+|.||+|+++|++|+++||+.|+|+++..
T Consensus 469 GG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 499 (528)
T 3u4j_A 469 GGYKKSGLGRELGRYGFDEYSQFKGVHVTLG 499 (528)
T ss_dssp CCSGGGEESCBSTTHHHHHTEEEEEEEEESS
T ss_pred CCcCcCCCCcCchHHHHHHhhceEEEEEeCC
Confidence 9999999999999999999999999998754
No 9
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=6.2e-83 Score=653.61 Aligned_cols=343 Identities=29% Similarity=0.468 Sum_probs=325.1
Q ss_pred ceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeCChHhHHHH
Q 015920 18 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSAL 96 (398)
Q Consensus 18 ~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g~~~~~~~L 96 (398)
.+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+|+.+.++.|
T Consensus 144 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L 223 (517)
T 3r31_A 144 AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLL 223 (517)
T ss_dssp EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHH
T ss_pred ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999999999999 9999999999988899999
Q ss_pred HhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeEEEeC
Q 015920 97 LDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 175 (398)
Q Consensus 97 ~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~ 175 (398)
++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+
T Consensus 224 ~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~ 302 (517)
T 3r31_A 224 VNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQK 302 (517)
T ss_dssp HTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEG
T ss_pred HhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHh-cCCCceeccCceEEEeH
Confidence 9996 999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred CchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCc-cC---CCCccccceEeecC
Q 015920 176 DYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGE-RD---KNKLRIAPTLLLDV 249 (398)
Q Consensus 176 ~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~-~~---~~~~~~~Ptvl~~~ 249 (398)
+++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++++ |+++++||. .+ ..|+|++|||+.++
T Consensus 303 ~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v 382 (517)
T 3r31_A 303 KAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADV 382 (517)
T ss_dssp GGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecC
Confidence 999999999999999999999998 8999999999999999999999865 789999993 11 36899999999999
Q ss_pred CCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCccc
Q 015920 250 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 329 (398)
Q Consensus 250 ~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG 329 (398)
+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.. ...+.+||||
T Consensus 383 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~--~~~~~~PfGG 460 (517)
T 3r31_A 383 TDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYN--LCPVEIPFGG 460 (517)
T ss_dssp CTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCC--CCCTTSCBCC
T ss_pred CCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCC--CCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999965 3468899999
Q ss_pred cCCCCCCCcchHHHHHhhhhceEEEEeCCCCCCC
Q 015920 330 VQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVP 363 (398)
Q Consensus 330 ~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~ 363 (398)
+|.||+|+++|++|+++||+.|+|+.+....+.+
T Consensus 461 ~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~ 494 (517)
T 3r31_A 461 SKQSGFGRENSAAALEHYSELKTVYVSTGKVDAP 494 (517)
T ss_dssp EETTEECCBSTGGGGGGSEEEEEEEECCC-----
T ss_pred cCcCCCCcCchHHHHHHhhceEEEEEcCCCCCCC
Confidence 9999999999999999999999999876544433
No 10
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.3e-82 Score=649.60 Aligned_cols=341 Identities=24% Similarity=0.405 Sum_probs=325.1
Q ss_pred CCcceEee-ecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015920 15 PSSAEIVP-EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 91 (398)
Q Consensus 15 ~~~~~~~~-~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~ 91 (398)
+...++++ +|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+| +.+
T Consensus 137 ~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~ 216 (506)
T 3rh9_A 137 KDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASV 216 (506)
T ss_dssp GGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHH
T ss_pred CceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChH
Confidence 45678889 9999999999999999999999999999999999999999999999999999999 99999999999 568
Q ss_pred hHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCe
Q 015920 92 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 170 (398)
Q Consensus 92 ~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~ 170 (398)
.+++|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 217 ~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 295 (506)
T 3rh9_A 217 IGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKF-RGGGQTCVCANR 295 (506)
T ss_dssp HHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSSSSCCE
T ss_pred HHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-HhCCCCcccCcE
Confidence 899999996 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccC-C-CCccccceEe
Q 015920 171 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD-K-NKLRIAPTLL 246 (398)
Q Consensus 171 v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~-~~~~~~Ptvl 246 (398)
||||++++|+|+++|+++++++++|||.+ ++++||+++++++++++++++++++ |+++++||... . .|+|++|||+
T Consensus 296 vlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl 375 (506)
T 3rh9_A 296 IFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVV 375 (506)
T ss_dssp EEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEE
T ss_pred EEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEE
Confidence 99999999999999999999999999998 8999999999999999999999865 77999999752 3 6899999999
Q ss_pred ecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCC
Q 015920 247 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 326 (398)
Q Consensus 247 ~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~p 326 (398)
.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+|
T Consensus 376 ~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~P 453 (506)
T 3rh9_A 376 QGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGP--TPEAP 453 (506)
T ss_dssp ECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCC--CTTSC
T ss_pred ccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC--CCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997643 47799
Q ss_pred ccccCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 015920 327 FGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 358 (398)
Q Consensus 327 fGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 358 (398)
|||+|.||+|+++|++|+++||+.|+|+++..
T Consensus 454 fGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~ 485 (506)
T 3rh9_A 454 FGGMKASGIGREGGLEGLFEFVEAQTVPRGFA 485 (506)
T ss_dssp BCCSGGGEESCBSHHHHHTTTEEEEEEEEC--
T ss_pred ccCcCcCcCCcCccHHHHHHhcceEEEEEcCc
Confidence 99999999999999999999999999988753
No 11
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=6.6e-83 Score=651.54 Aligned_cols=339 Identities=26% Similarity=0.467 Sum_probs=325.0
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 92 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~~ 92 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+| +.+.
T Consensus 159 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~ 238 (504)
T 3ek1_A 159 GQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREI 238 (504)
T ss_dssp TEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHH
T ss_pred cccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHH
Confidence 456789999999999999999999999999999999999999999999999999999999998 99999999998 5678
Q ss_pred HHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeE
Q 015920 93 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 171 (398)
Q Consensus 93 ~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v 171 (398)
++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||
T Consensus 239 g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv 317 (504)
T 3ek1_A 239 GAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKY-RNAGQTCVCANRI 317 (504)
T ss_dssp HHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEE
T ss_pred HHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEE
Confidence 99999996 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccCCCCccccceEeecC
Q 015920 172 ITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLDV 249 (398)
Q Consensus 172 ~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~~~~~~Ptvl~~~ 249 (398)
|||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++++ |+++++||.. ..|+|++|||+.++
T Consensus 318 lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-~~g~~~~PTvl~~v 396 (504)
T 3ek1_A 318 YVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE-LGGLFFEPGILTGV 396 (504)
T ss_dssp EEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-EETTEECCEEEEEE
T ss_pred EEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc-CCCceECCeEEecC
Confidence 9999999999999999999999999998 8999999999999999999999865 7899999976 46899999999999
Q ss_pred CCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCccc
Q 015920 250 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 329 (398)
Q Consensus 250 ~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG 329 (398)
+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.. ...+.+||||
T Consensus 397 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~--~~~~~~PfGG 474 (504)
T 3ek1_A 397 TSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGL--ISNEVAPFGG 474 (504)
T ss_dssp CTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSC--CCCSSSCBCC
T ss_pred CCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCC--CCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999865 3467899999
Q ss_pred cCCCCCCCcchHHHHHhhhhceEEEEeC
Q 015920 330 VQESGMGAYHGKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 330 ~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 357 (398)
+|.||+|+++|++++++||+.|+|+++.
T Consensus 475 ~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 475 VKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp SGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred cCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 9999999999999999999999998764
No 12
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=4.9e-82 Score=644.26 Aligned_cols=338 Identities=26% Similarity=0.448 Sum_probs=323.7
Q ss_pred CcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCCcEEEeC-ChHhHH
Q 015920 16 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG-AVAETS 94 (398)
Q Consensus 16 ~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~alp~g~v~~v~g-~~~~~~ 94 (398)
...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++++++|+|++|+|+| +.+.++
T Consensus 151 ~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ealP~gvv~vv~g~~~~~g~ 230 (495)
T 1wnd_A 151 HTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGD 230 (495)
T ss_dssp EEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHH
T ss_pred ceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHhCCcCeEEEEeCCCHHHHH
Confidence 3568899999999999999999999999999999999999999999999999999999999999999999999 678899
Q ss_pred HHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeEEE
Q 015920 95 ALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIIT 173 (398)
Q Consensus 95 ~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V 173 (398)
+|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||||
T Consensus 231 ~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV 309 (495)
T 1wnd_A 231 PLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY-YNAGQDCTAACRIYA 309 (495)
T ss_dssp HHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCCCEEEE
T ss_pred HHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEe
Confidence 999996 999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred eCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-c-CeeeecCc-cCCCCccccceEeecC
Q 015920 174 TKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-S-GKIVHGGE-RDKNKLRIAPTLLLDV 249 (398)
Q Consensus 174 ~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~-~~v~~gg~-~~~~~~~~~Ptvl~~~ 249 (398)
|++++|+|+++|+++++++++|||.+ ++++||+++++++++++++++++.+ | +++++||. .+..|+|++|||+.++
T Consensus 310 ~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v 389 (495)
T 1wnd_A 310 QKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGA 389 (495)
T ss_dssp ETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECC
T ss_pred cchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeCC
Confidence 99999999999999999999999999 8999999999999999999999865 6 78999997 5446899999999999
Q ss_pred CCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCccc
Q 015920 250 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 329 (398)
Q Consensus 250 ~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG 329 (398)
+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+... ..+.+||||
T Consensus 390 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG 467 (495)
T 1wnd_A 390 LQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHGG 467 (495)
T ss_dssp CTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCC--CCTTSCBCC
T ss_pred CCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999998643 357899999
Q ss_pred cCCCCCCCcchHHHHHhhhhceEEEEe
Q 015920 330 VQESGMGAYHGKFSFDVFSHKKAVLSR 356 (398)
Q Consensus 330 ~~~SG~G~~~g~~~l~~~t~~k~v~~~ 356 (398)
+|.||+|+++|.+|+++||+.|+|+.+
T Consensus 468 ~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 468 QKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp SGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred CCcCcCCccchHHHHHHhhCeEEEEec
Confidence 999999999999999999999999764
No 13
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=5e-82 Score=639.79 Aligned_cols=345 Identities=36% Similarity=0.660 Sum_probs=325.7
Q ss_pred eecCCCcccCCCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCCcE
Q 015920 5 VQAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIR 84 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~alp~g~v~ 84 (398)
+++..+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++++++|+|++|
T Consensus 111 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~alP~gvv~ 190 (457)
T 3lns_A 111 VSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVA 190 (457)
T ss_dssp EEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHCCTTTEE
T ss_pred ccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCHhhEE
Confidence 33444444456678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCChHhHHHHHhcCCCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCc
Q 015920 85 VVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 164 (398)
Q Consensus 85 ~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~ 164 (398)
+++|+.+.+.+|+++++|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.
T Consensus 191 vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~ 269 (457)
T 3lns_A 191 VIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF-INSGQT 269 (457)
T ss_dssp ECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCC
T ss_pred EecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHH-HhCCCC
Confidence 9999888999999877999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred cccCCeEEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCeeeecCccCCCCccccce
Q 015920 165 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPT 244 (398)
Q Consensus 165 C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Pt 244 (398)
|++++|||||++++|+|+++|++++++++ |.+. ++||+++++++++++++++++. +++++||..+..|+|++||
T Consensus 270 C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~~a~--~~~~~gg~~~~~g~~~~Pt 343 (457)
T 3lns_A 270 XIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLEATQ--GQVLVGSQADVSKRALSAT 343 (457)
T ss_dssp TTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHHHCC--SEEEECCCEEGGGTEECCE
T ss_pred ccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHHhcC--CeEEeCCccCCCCceeCCE
Confidence 99999999999999999999999999988 5666 9999999999999999999853 6999999876679999999
Q ss_pred EeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhc-CCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCC
Q 015920 245 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS-GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH 323 (398)
Q Consensus 245 vl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~-~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~ 323 (398)
|+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.++++++++++++|+|+||++..+...+
T Consensus 344 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~ 423 (457)
T 3lns_A 344 VVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSP 423 (457)
T ss_dssp EEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCT
T ss_pred EEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCC
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999976555678
Q ss_pred CCCccccCCCCCCCcchHHHHHhhhhceEEEEe
Q 015920 324 SLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 356 (398)
Q Consensus 324 ~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 356 (398)
.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 424 ~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 424 YLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp TSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred CCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 999999999999999999999999999999864
No 14
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=3.2e-82 Score=646.78 Aligned_cols=342 Identities=25% Similarity=0.446 Sum_probs=325.4
Q ss_pred CCCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015920 14 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 91 (398)
Q Consensus 14 ~~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~ 91 (398)
.+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+| +.+
T Consensus 138 ~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~ 217 (497)
T 3k2w_A 138 QDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSV 217 (497)
T ss_dssp TTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTT
T ss_pred CCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchH
Confidence 3457789999999999999999999999999999999999999999999999999999999999 99999999999 668
Q ss_pred hHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCe
Q 015920 92 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 170 (398)
Q Consensus 92 ~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~ 170 (398)
.++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 218 ~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 296 (497)
T 3k2w_A 218 VGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRF-ANCGQVCTCVER 296 (497)
T ss_dssp HHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTSEEE
T ss_pred HHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hCCCCCCcCCcE
Confidence 899999996 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCcc--C-C--CCccccc
Q 015920 171 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGER--D-K--NKLRIAP 243 (398)
Q Consensus 171 v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~--~-~--~~~~~~P 243 (398)
||||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++++ |+++++||.. . . .|+|++|
T Consensus 297 vlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~P 376 (497)
T 3k2w_A 297 LYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEP 376 (497)
T ss_dssp EEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCC
T ss_pred EEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCC
Confidence 99999999999999999999999999998 8999999999999999999999864 7899999973 2 2 6899999
Q ss_pred eEeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCC
Q 015920 244 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH 323 (398)
Q Consensus 244 tvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~ 323 (398)
||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+ .+
T Consensus 377 tvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~ 454 (497)
T 3k2w_A 377 TVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGE--QH 454 (497)
T ss_dssp EEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC--CT
T ss_pred EEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCC--CC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997654 48
Q ss_pred CCCccccCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 015920 324 SLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 358 (398)
Q Consensus 324 ~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 358 (398)
.+||||+|.||+|+++|++++++||+.|+|+.+..
T Consensus 455 ~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~ 489 (497)
T 3k2w_A 455 QGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINEA 489 (497)
T ss_dssp TSCBCCEETSEESCBSHHHHHHTTEEEEEEEEECC
T ss_pred CCCcCCcCCCcCCccchHHHHHHhcceEEEEEEcc
Confidence 89999999999999999999999999999988753
No 15
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.2e-82 Score=646.08 Aligned_cols=336 Identities=29% Similarity=0.473 Sum_probs=323.4
Q ss_pred cceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeCChHhHHH
Q 015920 17 SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSA 95 (398)
Q Consensus 17 ~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g~~~~~~~ 95 (398)
..+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+++++++++ +|+|++|+|+|+.+.+++
T Consensus 139 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~ 218 (495)
T 3b4w_A 139 QSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQA 218 (495)
T ss_dssp EEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHH
T ss_pred eEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHH
Confidence 5689999999999999999999999999999999999999999999999999999999998 999999999997788999
Q ss_pred HHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeEEEe
Q 015920 96 LLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT 174 (398)
Q Consensus 96 L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~ 174 (398)
|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||
T Consensus 219 L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~ 297 (495)
T 3b4w_A 219 LTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAP 297 (495)
T ss_dssp HTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEE
T ss_pred HHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHh-hcCCCCCCCCeEEEEc
Confidence 99985 999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccCC---CCccccceEeecC
Q 015920 175 KDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDK---NKLRIAPTLLLDV 249 (398)
Q Consensus 175 ~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~---~~~~~~Ptvl~~~ 249 (398)
++++|+|+++|+++++++++|||.+ ++++||+++++++++++++++++.+ |+++++||.... .|+|++|||+.++
T Consensus 298 ~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v 377 (495)
T 3b4w_A 298 RSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADV 377 (495)
T ss_dssp GGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESC
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCC
Confidence 9999999999999999999999998 8999999999999999999999865 679999997643 5899999999999
Q ss_pred CCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCccc
Q 015920 250 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 329 (398)
Q Consensus 250 ~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG 329 (398)
+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++. ..+.+||||
T Consensus 378 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~---~~~~~PfGG 454 (495)
T 3b4w_A 378 DNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA---FDPGSPFGG 454 (495)
T ss_dssp CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC---CCTTSCBCC
T ss_pred CCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC---CCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999864 457899999
Q ss_pred cCCCCCCCcchHHHHHhhhhceEEEEe
Q 015920 330 VQESGMGAYHGKFSFDVFSHKKAVLSR 356 (398)
Q Consensus 330 ~~~SG~G~~~g~~~l~~~t~~k~v~~~ 356 (398)
+|.||+|+++|.+++++||+.|+|+.+
T Consensus 455 ~k~SG~Gr~~G~~gl~~~~~~k~v~~~ 481 (495)
T 3b4w_A 455 YKNSGIGRENGPEGVEHFTQQKSVLLP 481 (495)
T ss_dssp SGGGEESCBSHHHHHHTTEEEEEEECC
T ss_pred CCCCCcCccchHHHHHHhcceeEEEEc
Confidence 999999999999999999999999875
No 16
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.5e-82 Score=647.79 Aligned_cols=341 Identities=24% Similarity=0.352 Sum_probs=325.2
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeCChHhH
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAET 93 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g~~~~~ 93 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+++|+.+.+
T Consensus 153 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~ 232 (521)
T 4e4g_A 153 GIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAV 232 (521)
T ss_dssp TEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHH
T ss_pred CcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHH
Confidence 345789999999999999999999999999999999999999999999999999999999999 9999999999988888
Q ss_pred HHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeEE
Q 015920 94 SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 172 (398)
Q Consensus 94 ~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v~ 172 (398)
++|++|+ +|+|.||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||
T Consensus 233 ~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvl 311 (521)
T 4e4g_A 233 DAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGY-GSAGERCMAISVAV 311 (521)
T ss_dssp HHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTSEEEEE
T ss_pred HHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHH-hCCCCCcccCeEEE
Confidence 9999996 999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred EeCC-chHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccC-----CCCccccce
Q 015920 173 TTKD-YAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD-----KNKLRIAPT 244 (398)
Q Consensus 173 V~~~-i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~~~~~~Pt 244 (398)
||++ ++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++++ |+++++||... ..|+|++||
T Consensus 312 V~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PT 391 (521)
T 4e4g_A 312 PVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGC 391 (521)
T ss_dssp EBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCE
T ss_pred EeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCE
Confidence 9999 99999999999999999999998 8999999999999999999999864 77999999642 468999999
Q ss_pred EeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCC
Q 015920 245 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS 324 (398)
Q Consensus 245 vl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~ 324 (398)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ...+.
T Consensus 392 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~ 470 (521)
T 4e4g_A 392 LFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIP-VPLAY 470 (521)
T ss_dssp EEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSC-CCCTT
T ss_pred EEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCC-CCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999753 33478
Q ss_pred CCccccCCCCCC--CcchHHHHHhhhhceEEEEeC
Q 015920 325 LPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 325 ~pfGG~~~SG~G--~~~g~~~l~~~t~~k~v~~~~ 357 (398)
+||||+|.||+| +++|++++++||+.|+|+.+.
T Consensus 471 ~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 505 (521)
T 4e4g_A 471 HSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW 505 (521)
T ss_dssp SCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred CCcCCcccCCCCCCccchHHHHHHhheEEEEEEec
Confidence 999999999999 799999999999999998864
No 17
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=3.6e-82 Score=650.84 Aligned_cols=342 Identities=25% Similarity=0.437 Sum_probs=326.2
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 92 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~~ 92 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+| +.+.
T Consensus 163 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~ 242 (538)
T 3qan_A 163 GEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEV 242 (538)
T ss_dssp TEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTT
T ss_pred CcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHH
Confidence 457789999999999999999999999999999999999999999999999999999999998 99999999999 6688
Q ss_pred HHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhc------cCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCcc
Q 015920 93 TSALLDQK-WDKICYTGNSRVARIVMAAAAKH------LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 165 (398)
Q Consensus 93 ~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~------~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C 165 (398)
++.|++|+ +|+|.||||+++|+.|++.++++ +||+++|||||||+||++|||++.|++.+++++| .|+||.|
T Consensus 243 g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C 321 (538)
T 3qan_A 243 GDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAF-GFSGQKC 321 (538)
T ss_dssp HHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCST
T ss_pred HHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCC
Confidence 99999996 99999999999999999999988 9999999999999999999999999999999999 9999999
Q ss_pred ccCCeEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHhcCeeeecCccCC-CCccccc
Q 015920 166 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK-NKLRIAP 243 (398)
Q Consensus 166 ~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~-~~~~~~P 243 (398)
++++|||||++++|+|+++|+++++++++|||.+ ++++||+++++++++++++++++++.|++++||..+. .|+|++|
T Consensus 322 ~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~~~~gG~~~~~~g~~~~P 401 (538)
T 3qan_A 322 SAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQP 401 (538)
T ss_dssp TCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEECCCEECSSSCEECC
T ss_pred ccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCCeEEeCCCcCCCCCceeCC
Confidence 9999999999999999999999999999999998 8999999999999999999999876449999998654 6899999
Q ss_pred eEeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCC
Q 015920 244 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH 323 (398)
Q Consensus 244 tvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~ 323 (398)
||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.......+
T Consensus 402 Tvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~ 481 (538)
T 3qan_A 402 TIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVG 481 (538)
T ss_dssp EEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTT
T ss_pred eeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999543344468
Q ss_pred CCCccccCCCCCC-CcchHHHHHhhhhceEEEEeC
Q 015920 324 SLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 324 ~~pfGG~~~SG~G-~~~g~~~l~~~t~~k~v~~~~ 357 (398)
.+||||+|.||+| +++|.+++++||+.|+|+.+.
T Consensus 482 ~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 482 YHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp TSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred CCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence 8999999999999 999999999999999998875
No 18
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.2e-81 Score=641.79 Aligned_cols=336 Identities=26% Similarity=0.422 Sum_probs=320.2
Q ss_pred CCcceEe-eecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015920 15 PSSAEIV-PEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 91 (398)
Q Consensus 15 ~~~~~~~-~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~ 91 (398)
+...+++ ++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+| +.+
T Consensus 151 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~ 230 (497)
T 3i44_A 151 GNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGAN 230 (497)
T ss_dssp TCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTT
T ss_pred CceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChH
Confidence 3457788 99999999999999999999999999999999999999999999999999999999 99999999999 668
Q ss_pred hHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCe
Q 015920 92 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 170 (398)
Q Consensus 92 ~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~ 170 (398)
.++.|++|+ +|+|.||||+++|+.|++.+++++||+++|||||||+||++||| +.|++.+++++| .|+||.|++++|
T Consensus 231 ~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f-~n~GQ~C~a~~r 308 (497)
T 3i44_A 231 VGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCF-YNSGQSCNAPTR 308 (497)
T ss_dssp HHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHH-GGGGCCTTCCCE
T ss_pred HHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHH-hcCCCCcccCCE
Confidence 899999996 99999999999999999999999999999999999999999999 999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCc-cCC---CCccccce
Q 015920 171 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGE-RDK---NKLRIAPT 244 (398)
Q Consensus 171 v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~-~~~---~~~~~~Pt 244 (398)
||||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++++ |+++++||. ... .|+|++||
T Consensus 309 vlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PT 388 (497)
T 3i44_A 309 MLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPT 388 (497)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCE
T ss_pred EEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCE
Confidence 99999999999999999999999999998 8999999999999999999999865 779999994 322 68999999
Q ss_pred EeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCC
Q 015920 245 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS 324 (398)
Q Consensus 245 vl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~ 324 (398)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||. ....+.
T Consensus 389 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~---~~~~~~ 465 (497)
T 3i44_A 389 VFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG---HELPGG 465 (497)
T ss_dssp EEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT---CCCCTT
T ss_pred EEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC---CCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999995 234578
Q ss_pred CCccccCCCCCCCcchHHHHHhhhhceEEEE
Q 015920 325 LPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 355 (398)
Q Consensus 325 ~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~ 355 (398)
+||||+|.||+|+++|.+++++||+.|+|+.
T Consensus 466 ~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~ 496 (497)
T 3i44_A 466 SYFGGVKFSGRAREGGLWGIKEFLDTKAISY 496 (497)
T ss_dssp CCBCCSGGGCCCCBSHHHHHHTTEEEEEESC
T ss_pred CCcCCcCcCcCCccchHHHHHHhcceeEEEe
Confidence 9999999999999999999999999999853
No 19
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=4.9e-82 Score=647.02 Aligned_cols=337 Identities=26% Similarity=0.428 Sum_probs=322.9
Q ss_pred cceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChHhHH
Q 015920 17 SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAETS 94 (398)
Q Consensus 17 ~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~~~~ 94 (398)
..+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+| +.+.++
T Consensus 171 ~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~ 250 (517)
T 2o2p_A 171 LTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQ 250 (517)
T ss_dssp EEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHH
T ss_pred eEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHH
Confidence 5689999999999999999999999999999999999999999999999999999999999 99999999999 567899
Q ss_pred HHHhcC-CCEEEEeCCHHHHHHHHHHHh-hccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeEE
Q 015920 95 ALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 172 (398)
Q Consensus 95 ~L~~~~-v~~v~ftGs~~~g~~i~~~~~-~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v~ 172 (398)
+|++|+ +|+|.||||+++|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||
T Consensus 251 ~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~ 329 (517)
T 2o2p_A 251 RLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVF-FNKGENCIAAGRLF 329 (517)
T ss_dssp HHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEE
T ss_pred HHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCeEEE
Confidence 999996 999999999999999999999 999999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccCC-CCccccceEeecC
Q 015920 173 TTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDK-NKLRIAPTLLLDV 249 (398)
Q Consensus 173 V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~-~~~~~~Ptvl~~~ 249 (398)
||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++++ |+++++||.... .|+|++|||+.++
T Consensus 330 V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v 409 (517)
T 2o2p_A 330 VEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDV 409 (517)
T ss_dssp EEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESC
T ss_pred EeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCC
Confidence 999999999999999999999999998 8999999999999999999999865 779999997643 6899999999999
Q ss_pred CCCCcccccccccceeeEEeeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCc
Q 015920 250 PRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 327 (398)
Q Consensus 250 ~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pf 327 (398)
+++|++++||+||||++|++|+| +||||+++|+++|||++||||+|.++++++++++++|+|+||+... ..+.+||
T Consensus 410 ~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~Pf 487 (517)
T 2o2p_A 410 EDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNK--TDVAAPF 487 (517)
T ss_dssp CTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCB
T ss_pred CCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCC--CCCCCCc
Confidence 99999999999999999999999 9999999999999999999999999999999999999999998643 3578999
Q ss_pred cccCCCCCCCcchHHHHHhhhhceEEEEe
Q 015920 328 GGVQESGMGAYHGKFSFDVFSHKKAVLSR 356 (398)
Q Consensus 328 GG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 356 (398)
||+|.||+|+++|.+++++||+.|+|+.+
T Consensus 488 GG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 488 GGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp CCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred CCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 99999999999999999999999999764
No 20
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=9.8e-82 Score=642.95 Aligned_cols=339 Identities=27% Similarity=0.451 Sum_probs=324.1
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 92 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~~ 92 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+| +.+.
T Consensus 150 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~ 229 (501)
T 1bxs_A 150 NFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTA 229 (501)
T ss_dssp SEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTH
T ss_pred CcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHH
Confidence 335689999999999999999999999999999999999999999999999999999999999 99999999999 6788
Q ss_pred HHHHHhcC-CCEEEEeCCHHHHHHHHHHHh-hccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCe
Q 015920 93 TSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 170 (398)
Q Consensus 93 ~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~-~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~ 170 (398)
++.|++|+ +|+|.||||+++|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 230 g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 308 (501)
T 1bxs_A 230 GAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASR 308 (501)
T ss_dssp HHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TTTTCCTTCCCE
T ss_pred HHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCCE
Confidence 99999996 999999999999999999999 999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccC-CCCccccceEee
Q 015920 171 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD-KNKLRIAPTLLL 247 (398)
Q Consensus 171 v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~~~~~~Ptvl~ 247 (398)
||||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++.+ |+++++||... ..|+|++|||+.
T Consensus 309 vlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~ 388 (501)
T 1bxs_A 309 LFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFS 388 (501)
T ss_dssp EEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEE
T ss_pred EEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEe
Confidence 99999999999999999999999999998 8999999999999999999999864 77899999763 368999999999
Q ss_pred cCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCc
Q 015920 248 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 327 (398)
Q Consensus 248 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pf 327 (398)
+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+... ..+.+||
T Consensus 389 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~pf 466 (501)
T 1bxs_A 389 DVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSV--VSAQCPF 466 (501)
T ss_dssp SCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCC--CCTTSCB
T ss_pred cCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCC--CCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998643 3478999
Q ss_pred cccCCCCCCCcchHHHHHhhhhceEEEEe
Q 015920 328 GGVQESGMGAYHGKFSFDVFSHKKAVLSR 356 (398)
Q Consensus 328 GG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 356 (398)
||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 467 GG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 467 GGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp CCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 99999999999999999999999999876
No 21
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.3e-81 Score=642.81 Aligned_cols=339 Identities=29% Similarity=0.486 Sum_probs=324.1
Q ss_pred CcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeCChHhHH
Q 015920 16 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETS 94 (398)
Q Consensus 16 ~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g~~~~~~ 94 (398)
...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+++++++++ +|+|++|+|+|+.+.++
T Consensus 147 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~ 226 (503)
T 1a4s_A 147 AFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGS 226 (503)
T ss_dssp CEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHH
T ss_pred ceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHH
Confidence 45689999999999999999999999999999999999999999999999999999999999 99999999999338889
Q ss_pred HHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeEEE
Q 015920 95 ALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIIT 173 (398)
Q Consensus 95 ~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V 173 (398)
.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||||
T Consensus 227 ~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV 305 (503)
T 1a4s_A 227 LLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFV 305 (503)
T ss_dssp HHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTC-GGGGCCTTCCCEEEE
T ss_pred HHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEE
Confidence 999996 999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred eCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccC-------CCCccccce
Q 015920 174 TKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD-------KNKLRIAPT 244 (398)
Q Consensus 174 ~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-------~~~~~~~Pt 244 (398)
|++++|+|+++|+++++++++|||.+ ++++||+++++++++++++++++++ |+++++||... ..|+|++||
T Consensus 306 ~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PT 385 (503)
T 1a4s_A 306 QREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPC 385 (503)
T ss_dssp EGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCE
T ss_pred ehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCE
Confidence 99999999999999999999999999 8999999999999999999999864 77999999764 358999999
Q ss_pred EeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCC
Q 015920 245 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS 324 (398)
Q Consensus 245 vl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~ 324 (398)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+... ..+.
T Consensus 386 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~ 463 (503)
T 1a4s_A 386 VLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI--SPVE 463 (503)
T ss_dssp EEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC--CCTT
T ss_pred EEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCC--CCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999654 3578
Q ss_pred CCccccCCCCCCCcchHHHHHhhhhceEEEEeC
Q 015920 325 LPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 325 ~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 357 (398)
+||||+|.||+|+++|.+++++||+.|+|+.+.
T Consensus 464 ~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 464 VPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp SCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred CCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 999999999999999999999999999998864
No 22
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.4e-81 Score=640.25 Aligned_cols=339 Identities=26% Similarity=0.449 Sum_probs=325.2
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 92 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~~ 92 (398)
+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+++| +.+.
T Consensus 136 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~ 215 (481)
T 3jz4_A 136 DKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAV 215 (481)
T ss_dssp TEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHH
T ss_pred CceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHH
Confidence 446789999999999999999999999999999999999999999999999999999999998 99999999999 6788
Q ss_pred HHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeE
Q 015920 93 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 171 (398)
Q Consensus 93 ~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v 171 (398)
++.|++|+ +|+|.||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||
T Consensus 216 g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rv 294 (481)
T 3jz4_A 216 GNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKF-RNAGQTCVCANRL 294 (481)
T ss_dssp HHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEE
T ss_pred HHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHH-HhCCCcccCCcEE
Confidence 99999996 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCcc-CCCCccccceEeec
Q 015920 172 ITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGER-DKNKLRIAPTLLLD 248 (398)
Q Consensus 172 ~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~~~~~~Ptvl~~ 248 (398)
|||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++++ |+++++||.. +.+|+|++|||+.+
T Consensus 295 lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~ 374 (481)
T 3jz4_A 295 YVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVD 374 (481)
T ss_dssp EEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEES
T ss_pred EEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEec
Confidence 9999999999999999999999999998 8999999999999999999999865 7799999976 34689999999999
Q ss_pred CCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCcc
Q 015920 249 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 328 (398)
Q Consensus 249 ~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfG 328 (398)
++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++.. ..+.+|||
T Consensus 375 v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfG 452 (481)
T 3jz4_A 375 VPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII--SNEVAPFG 452 (481)
T ss_dssp CCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCC--CCSSSCBC
T ss_pred CCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCC--CCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999654 35789999
Q ss_pred ccCCCCCCCcchHHHHHhhhhceEEEEe
Q 015920 329 GVQESGMGAYHGKFSFDVFSHKKAVLSR 356 (398)
Q Consensus 329 G~~~SG~G~~~g~~~l~~~t~~k~v~~~ 356 (398)
|+|.||+|+++|++|+++||+.|+|++.
T Consensus 453 G~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 453 GIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp CSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9999999999999999999999999864
No 23
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=6.3e-82 Score=644.23 Aligned_cols=339 Identities=27% Similarity=0.434 Sum_probs=324.3
Q ss_pred CcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChHhH
Q 015920 16 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAET 93 (398)
Q Consensus 16 ~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~~~ 93 (398)
...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+| +.+.+
T Consensus 150 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g 229 (500)
T 1o04_A 150 FFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAG 229 (500)
T ss_dssp EEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHH
T ss_pred ceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHH
Confidence 35689999999999999999999999999999999999999999999999999999999999 99999999999 67889
Q ss_pred HHHHhcC-CCEEEEeCCHHHHHHHHHHHh-hccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeE
Q 015920 94 SALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 171 (398)
Q Consensus 94 ~~L~~~~-v~~v~ftGs~~~g~~i~~~~~-~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v 171 (398)
+.|++|+ +|+|.||||+++|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||
T Consensus 230 ~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rv 308 (500)
T 1o04_A 230 AAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRT 308 (500)
T ss_dssp HHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEE
T ss_pred HHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-ccCCCCCCCCCEE
Confidence 9999996 999999999999999999999 999999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccC-CCCccccceEeec
Q 015920 172 ITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD-KNKLRIAPTLLLD 248 (398)
Q Consensus 172 ~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~~~~~~Ptvl~~ 248 (398)
|||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++.+ |+++++||... ..|+|++|||+.+
T Consensus 309 lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~ 388 (500)
T 1o04_A 309 FVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGD 388 (500)
T ss_dssp EEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEES
T ss_pred EEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeC
Confidence 9999999999999999999999999998 8999999999999999999999864 67899999764 3689999999999
Q ss_pred CCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCcc
Q 015920 249 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 328 (398)
Q Consensus 249 ~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfG 328 (398)
++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+... ..+.+|||
T Consensus 389 v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfG 466 (500)
T 1o04_A 389 VQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDV--FGAQSPFG 466 (500)
T ss_dssp CCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBC
T ss_pred CCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999653 34789999
Q ss_pred ccCCCCCCCcchHHHHHhhhhceEEEEeC
Q 015920 329 GVQESGMGAYHGKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 329 G~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 357 (398)
|+|.||+|+++|.+++++|++.|+|+.+.
T Consensus 467 G~k~SG~G~~~G~~gl~~f~~~K~v~~~~ 495 (500)
T 1o04_A 467 GYKMSGSGRELGEYGLQAYTEVKTVTVKV 495 (500)
T ss_dssp CSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred CcCCCCCCccchHHHHHHhcceEEEEEec
Confidence 99999999999999999999999998763
No 24
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.9e-81 Score=641.91 Aligned_cols=339 Identities=27% Similarity=0.447 Sum_probs=323.7
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 92 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~~ 92 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+++++++++ +|+|++|+|+| +.+.
T Consensus 153 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~ 232 (515)
T 2d4e_A 153 DWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEA 232 (515)
T ss_dssp TEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTH
T ss_pred CceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHH
Confidence 345688999999999999999999999999999999999999999999999999999999999 99999999999 5678
Q ss_pred HHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeE
Q 015920 93 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 171 (398)
Q Consensus 93 ~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v 171 (398)
++.|++|+ +|+|.||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||
T Consensus 233 g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rv 311 (515)
T 2d4e_A 233 GAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIF-SFNGERCTASSRL 311 (515)
T ss_dssp HHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEE
T ss_pred HHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEE
Confidence 99999995 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccCC---------CCcc
Q 015920 172 ITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDK---------NKLR 240 (398)
Q Consensus 172 ~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~---------~~~~ 240 (398)
|||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++.+ |+++++||.... .|+|
T Consensus 312 lV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~ 391 (515)
T 2d4e_A 312 LVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNY 391 (515)
T ss_dssp EEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTC
T ss_pred EEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCce
Confidence 9999999999999999999999999999 7999999999999999999999864 779999997643 5899
Q ss_pred ccceEeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCccc
Q 015920 241 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHL 320 (398)
Q Consensus 241 ~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~ 320 (398)
++|||+.+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+...
T Consensus 392 ~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-- 468 (515)
T 2d4e_A 392 LLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNV-- 468 (515)
T ss_dssp BCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCC--
T ss_pred eCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--
Confidence 99999999 999999999999999999999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCccccCCCCCCCcchHHHHHhhhhceEEEEeC
Q 015920 321 AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 321 ~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 357 (398)
..+.+||||+|.||+|+++|.+++++||+.|+|+.+.
T Consensus 469 ~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 469 RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 4578999999999999999999999999999998864
No 25
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=7.5e-82 Score=644.38 Aligned_cols=336 Identities=27% Similarity=0.449 Sum_probs=321.6
Q ss_pred CcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChHhH
Q 015920 16 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAET 93 (398)
Q Consensus 16 ~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~~~ 93 (398)
...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+| +.+.+
T Consensus 144 ~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g 223 (505)
T 3prl_A 144 KIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIG 223 (505)
T ss_dssp EEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHH
T ss_pred ceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999998 99999999999 56889
Q ss_pred HHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeEE
Q 015920 94 SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 172 (398)
Q Consensus 94 ~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v~ 172 (398)
+.|++|+ +|+|.||||+++|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||
T Consensus 224 ~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvl 300 (505)
T 3prl_A 224 DHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAF-SYSGQRCTAIKRVF 300 (505)
T ss_dssp HHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCSSSEEEEE
T ss_pred HHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHH-hcCCCccccCceEE
Confidence 9999995 999999999999999999887 8999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccCCCCccccceEeecCCC
Q 015920 173 TTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLDVPR 251 (398)
Q Consensus 173 V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~~~~~~Ptvl~~~~~ 251 (398)
||++++|+|+++|+++++++++|||.+++++||+++++++++++++++++++ |+++++||.. .|+|++|||+.++++
T Consensus 301 V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~--~g~~~~PTvl~~v~~ 378 (505)
T 3prl_A 301 VQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR--QGNLLSPTLLDDVTP 378 (505)
T ss_dssp EEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCT
T ss_pred EeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCceeCCeEeecCCC
Confidence 9999999999999999999999999878999999999999999999999865 7799999974 589999999999999
Q ss_pred CCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCccccC
Q 015920 252 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 331 (398)
Q Consensus 252 ~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~ 331 (398)
+|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+... ...+.+||||+|
T Consensus 379 ~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~~PFGG~k 457 (505)
T 3prl_A 379 AMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTE-RGPDHFPFLGVK 457 (505)
T ss_dssp TSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCC-SCSTTSCBCCEE
T ss_pred CChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCC-CCCCCCCcCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999764 245889999999
Q ss_pred CCCCCCcchHHHHHhhhhceEEEEeC
Q 015920 332 ESGMGAYHGKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 332 ~SG~G~~~g~~~l~~~t~~k~v~~~~ 357 (398)
.||+|+++|.+++++||+.|+|+++.
T Consensus 458 ~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 458 KSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp TTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred cCCCCcCccHHHHHHhhceEEEEEeC
Confidence 99999999999999999999998865
No 26
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=3.2e-81 Score=637.34 Aligned_cols=339 Identities=26% Similarity=0.460 Sum_probs=323.2
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeCC-hHh
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGA-VAE 92 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g~-~~~ 92 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+++++++++ +|+|++|+++|+ .+.
T Consensus 133 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~ 212 (479)
T 2imp_A 133 GENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETV 212 (479)
T ss_dssp TEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTH
T ss_pred CceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHH
Confidence 336689999999999999999999999999999999999999999999999999999999999 999999999994 568
Q ss_pred HHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeE
Q 015920 93 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 171 (398)
Q Consensus 93 ~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v 171 (398)
++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||
T Consensus 213 ~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv 291 (479)
T 2imp_A 213 GQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRV-INSGQVCNCAERV 291 (479)
T ss_dssp HHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSS-TTTTCCSSSCSEE
T ss_pred HHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCcCCcEE
Confidence 89999995 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHhhhcCCCCCC--CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCcc-CCCCccccceEee
Q 015920 172 ITTKDYAPKLLESLKNELENFYGKNPLE--SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGER-DKNKLRIAPTLLL 247 (398)
Q Consensus 172 ~V~~~i~~~f~~~l~~~~~~l~~g~p~~--~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~~~~~~Ptvl~ 247 (398)
|||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++++ |+++++||.. +..|+|++|||+.
T Consensus 292 ~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~ 371 (479)
T 2imp_A 292 YVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLL 371 (479)
T ss_dssp EEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEE
T ss_pred EEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEe
Confidence 9999999999999999999999999986 7999999999999999999999865 6789999975 2358999999999
Q ss_pred cCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCc
Q 015920 248 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 327 (398)
Q Consensus 248 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pf 327 (398)
+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+ .+.+||
T Consensus 372 ~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~Pf 449 (479)
T 2imp_A 372 DVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFH 449 (479)
T ss_dssp SCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCB
T ss_pred CCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC--CCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999997654 578999
Q ss_pred cccCCCCCCCcchHHHHHhhhhceEEEEe
Q 015920 328 GGVQESGMGAYHGKFSFDVFSHKKAVLSR 356 (398)
Q Consensus 328 GG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 356 (398)
||+|.||+|+++|.+++++||+.|+|+.+
T Consensus 450 GG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 450 AGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp CCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 99999999999999999999999999864
No 27
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1e-80 Score=635.63 Aligned_cols=342 Identities=27% Similarity=0.430 Sum_probs=326.6
Q ss_pred CCCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015920 14 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 91 (398)
Q Consensus 14 ~~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~ 91 (398)
.+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+++++++++ +|+|++|+++| +.+
T Consensus 132 ~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~ 211 (490)
T 2ve5_A 132 ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGRE 211 (490)
T ss_dssp TTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTT
T ss_pred CCceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChH
Confidence 3456789999999999999999999999999999999999999999999999999999999999 99999999999 778
Q ss_pred hHHHHHhcC-CCEEEEeCCHHHHHHHHHHH-hhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCC
Q 015920 92 ETSALLDQK-WDKICYTGNSRVARIVMAAA-AKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 169 (398)
Q Consensus 92 ~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~-~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~ 169 (398)
.++.|++|+ +|+|+||||+++|+.|++.+ ++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++
T Consensus 212 ~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~ 290 (490)
T 2ve5_A 212 VGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGT 290 (490)
T ss_dssp HHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCC
T ss_pred HHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHH-hcCCCCccCCC
Confidence 999999996 99999999999999999999 9999999999999999999999999999999999999 99999999999
Q ss_pred eEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccC-----CCCcccc
Q 015920 170 HIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD-----KNKLRIA 242 (398)
Q Consensus 170 ~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~~~~~~ 242 (398)
|||||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++.+ |+++++||... ..|+|++
T Consensus 291 rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~ 370 (490)
T 2ve5_A 291 RVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVA 370 (490)
T ss_dssp EEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBC
T ss_pred eEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEc
Confidence 999999999999999999999999999998 8999999999999999999999865 77999999762 3689999
Q ss_pred ceEeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCC
Q 015920 243 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAV 322 (398)
Q Consensus 243 Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~ 322 (398)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+... ..
T Consensus 371 Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~--~~ 448 (490)
T 2ve5_A 371 PTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE--SP 448 (490)
T ss_dssp CEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CC
T ss_pred cEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCC--CC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999653 35
Q ss_pred CCCCccccCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 015920 323 HSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 358 (398)
Q Consensus 323 ~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 358 (398)
+.+||||+|.||+|+++|.+++++||+.|+|+++..
T Consensus 449 ~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~~~~ 484 (490)
T 2ve5_A 449 AEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELG 484 (490)
T ss_dssp TTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred CCCCcCCCCCCCCCCcchHHHHHHhheeEEEEEccC
Confidence 889999999999999999999999999999988753
No 28
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=4e-81 Score=635.91 Aligned_cols=348 Identities=26% Similarity=0.422 Sum_probs=329.2
Q ss_pred cceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeCChHhHHH
Q 015920 17 SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSA 95 (398)
Q Consensus 17 ~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g~~~~~~~ 95 (398)
....+++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++..+++++.++ +|+|++++++|+.+.+..
T Consensus 119 ~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~ 198 (474)
T 4h7n_A 119 ALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGAN 198 (474)
T ss_dssp EEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHH
T ss_pred cceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccccchhhhh
Confidence 4567889999999999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred HHhcCCCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeEEEeC
Q 015920 96 LLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 175 (398)
Q Consensus 96 L~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~ 175 (398)
|+.| +|+|.||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+
T Consensus 199 l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~ 276 (474)
T 4h7n_A 199 LINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAV-VNTGQSCLSIERIYVAE 276 (474)
T ss_dssp HHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEG
T ss_pred hhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCccccCchhhHHHHHHHHHhhhc-cCCCCceeecccccchH
Confidence 9976 999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred CchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccC--CCCccccceEeecCCC
Q 015920 176 DYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD--KNKLRIAPTLLLDVPR 251 (398)
Q Consensus 176 ~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~--~~~~~~~Ptvl~~~~~ 251 (398)
+++|+|+++|++++++++.|||.+ .+++||++++.++++++++++++.+ +++++.||... .+|+|++|||+.++++
T Consensus 277 ~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~ 356 (474)
T 4h7n_A 277 SKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNH 356 (474)
T ss_dssp GGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCT
T ss_pred HHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeecc
Confidence 999999999999999999999998 8999999999999999999999865 67888888764 3689999999999999
Q ss_pred CCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCccccC
Q 015920 252 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 331 (398)
Q Consensus 252 ~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG~~ 331 (398)
+|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+...+...+..||||+|
T Consensus 357 ~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~ 436 (474)
T 4h7n_A 357 SMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFN 436 (474)
T ss_dssp TSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCG
T ss_pred ccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999998777777899999999
Q ss_pred CCCCC-CcchHHHHHhhhhceEEEEeCCCCCCCccC
Q 015920 332 ESGMG-AYHGKFSFDVFSHKKAVLSRGFIGDVPVRY 366 (398)
Q Consensus 332 ~SG~G-~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~ 366 (398)
.||+| +++|.+|+++|++.|+|+++......|++|
T Consensus 437 ~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 437 FSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472 (474)
T ss_dssp GGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred CCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence 99998 789999999999999999886544444443
No 29
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=2.8e-81 Score=637.33 Aligned_cols=335 Identities=30% Similarity=0.531 Sum_probs=319.3
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-----cCCCCcEEEeC-
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-----MDLSSIRVVEG- 88 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-----lp~g~v~~v~g- 88 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+++++++++ +|+|++|+++|
T Consensus 121 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~ 200 (486)
T 3pqa_A 121 DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGA 200 (486)
T ss_dssp TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSC
T ss_pred CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCC
Confidence 457789999999999999999999999999999999999999999999999999999999887 99999999999
Q ss_pred ChHhHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCcccc
Q 015920 89 AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 167 (398)
Q Consensus 89 ~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a 167 (398)
+.+.++.|++|+ +|+|+||||+++|+.|++.++ +||+++|||||||+||++|||++.|++.+++++| .|+||.|++
T Consensus 201 ~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a 277 (486)
T 3pqa_A 201 GEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSF-IYAGQVCIS 277 (486)
T ss_dssp TTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTS
T ss_pred chHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHH-hcCCCCccC
Confidence 456789999995 999999999999999999887 8999999999999999999999999999999999 999999999
Q ss_pred CCeEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccCCCCccccceE
Q 015920 168 PDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTL 245 (398)
Q Consensus 168 ~~~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~~~~~~Ptv 245 (398)
++|||||++++|+|+++|+++++++++|||.+ ++++||+++++++++++++++++.+ |+++++||.. .|+|++|||
T Consensus 278 ~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptv 355 (486)
T 3pqa_A 278 VGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR--DKALFYPTI 355 (486)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEE
T ss_pred CcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCcEeccEE
Confidence 99999999999999999999999999999998 8999999999999999999999865 7799999965 589999999
Q ss_pred eecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCC
Q 015920 246 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 325 (398)
Q Consensus 246 l~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~ 325 (398)
+ +++++|++++||+||||++|++|+| ||||+++|+++|||++||||+|.++++++++++++|+|+||+.+.+. .+.+
T Consensus 356 l-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~-~~~~ 432 (486)
T 3pqa_A 356 L-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFR-QDNM 432 (486)
T ss_dssp E-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCC-CTTS
T ss_pred E-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcC-CCCC
Confidence 9 9999999999999999999999999 99999999999999999999999999999999999999999976533 3589
Q ss_pred CccccCCCCCCCcchHHHHHhhhhceEEEEeC
Q 015920 326 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 326 pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 357 (398)
||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 433 PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 433 PFGGVKKSGLGREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp CBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence 99999999999999999999999999998875
No 30
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=6.2e-81 Score=639.98 Aligned_cols=339 Identities=24% Similarity=0.417 Sum_probs=323.0
Q ss_pred CcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChHhH
Q 015920 16 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAET 93 (398)
Q Consensus 16 ~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~~~ 93 (398)
...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+| +.+.+
T Consensus 165 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~ 244 (516)
T 1uzb_A 165 EDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVG 244 (516)
T ss_dssp EEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHH
T ss_pred ceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhh
Confidence 45689999999999999999999999999999999999999999999999999999999999 99999999999 67889
Q ss_pred HHHHhcC-CCEEEEeCCHHHHHHHHHHHh------hccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccc
Q 015920 94 SALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACI 166 (398)
Q Consensus 94 ~~L~~~~-v~~v~ftGs~~~g~~i~~~~~------~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~ 166 (398)
++|++|+ +|+|.||||+++|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++| .|+||.|+
T Consensus 245 ~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~ 323 (516)
T 1uzb_A 245 AYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY-GFQGQKCS 323 (516)
T ss_dssp HHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTT
T ss_pred hhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHH-hCCCCccc
Confidence 9999996 999999999999999999998 789999999999999999999999999999999999 99999999
Q ss_pred cCCeEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHhcCeeeecCcc-CCCCccccce
Q 015920 167 SPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPT 244 (398)
Q Consensus 167 a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~-~~~~~~~~Pt 244 (398)
+++|||||++++|+|+++|+++++++++||| + ++++||+++++++++++++++++.+.+++++||.. +..|+|++||
T Consensus 324 a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~v~~gg~~~~~~g~~~~Pt 402 (516)
T 1uzb_A 324 AASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPT 402 (516)
T ss_dssp CEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCE
T ss_pred cCcEEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCCCEEECCccCCCCCcEECCE
Confidence 9999999999999999999999999999999 7 89999999999999999999998765688999976 2468999999
Q ss_pred EeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCC
Q 015920 245 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS 324 (398)
Q Consensus 245 vl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~ 324 (398)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++..+...+.
T Consensus 403 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~ 482 (516)
T 1uzb_A 403 VFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGV 482 (516)
T ss_dssp EEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTT
T ss_pred EEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999765555678
Q ss_pred CCccccCCCCCCC-cchHHHHHhhhhceEEEEe
Q 015920 325 LPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSR 356 (398)
Q Consensus 325 ~pfGG~~~SG~G~-~~g~~~l~~~t~~k~v~~~ 356 (398)
+||||+|.||+|+ .+|.+++++||+.|+|+.+
T Consensus 483 ~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 483 QPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp SCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred CCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 9999999999994 7899999999999999763
No 31
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=4.7e-81 Score=634.01 Aligned_cols=340 Identities=24% Similarity=0.426 Sum_probs=325.9
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeCChHhH
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAET 93 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g~~~~~ 93 (398)
+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+++|+.+.+
T Consensus 117 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~ 196 (462)
T 3etf_A 117 NQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGV 196 (462)
T ss_dssp GGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHH
T ss_pred CceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHH
Confidence 446789999999999999999999999999999999999999999999999999999999998 9999999999988889
Q ss_pred HHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeEE
Q 015920 94 SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 172 (398)
Q Consensus 94 ~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v~ 172 (398)
.+|++|+ +|+|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||
T Consensus 197 ~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvl 275 (462)
T 3etf_A 197 SQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRY-QNTGQVCAAAKRFI 275 (462)
T ss_dssp HHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEE
T ss_pred HHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHH-hcCCCcccCCcEEE
Confidence 9999985 999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCcc-CCCCccccceEeecC
Q 015920 173 TTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGER-DKNKLRIAPTLLLDV 249 (398)
Q Consensus 173 V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~~~~~~Ptvl~~~ 249 (398)
||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++.+ |+++++||.. +..|+|++|||+.++
T Consensus 276 V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v 355 (462)
T 3etf_A 276 VEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADV 355 (462)
T ss_dssp EEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESC
T ss_pred EehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECC
Confidence 999999999999999999999999998 8999999999999999999999865 7799999974 357899999999999
Q ss_pred CCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCccc
Q 015920 250 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 329 (398)
Q Consensus 250 ~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG 329 (398)
+++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||
T Consensus 356 ~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~--~~~~~PfGG 433 (462)
T 3etf_A 356 TPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSA--SDARVAFGG 433 (462)
T ss_dssp CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCC--CCTTSCBCC
T ss_pred CCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999653 468899999
Q ss_pred cCCCCCCCcchHHHHHhhhhceEEEEeC
Q 015920 330 VQESGMGAYHGKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 330 ~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 357 (398)
+|.||+|+++|.+|+++||+.|+|++++
T Consensus 434 ~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 434 VKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp SGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred cCCCCCCccchHHHHHHHhceeEEEEec
Confidence 9999999999999999999999998764
No 32
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1e-80 Score=637.27 Aligned_cols=340 Identities=26% Similarity=0.447 Sum_probs=309.3
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHH-HHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS-SLLAKLVGEY-MDLSSIRVVEG-AVA 91 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~-~~l~~~~~~a-lp~g~v~~v~g-~~~ 91 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ .++++++.++ +|+|++|+++| +.+
T Consensus 139 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~ 218 (508)
T 3r64_A 139 GKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSE 218 (508)
T ss_dssp TEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTT
T ss_pred CceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHH
Confidence 35678999999999999999999999999999999999999999999999999 9999999999 99999999999 478
Q ss_pred hHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhh--ccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccC
Q 015920 92 ETSALLDQK-WDKICYTGNSRVARIVMAAAAK--HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISP 168 (398)
Q Consensus 92 ~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~--~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~ 168 (398)
.+++|++|+ +|+|.||||+++|+.|++.+++ ++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++
T Consensus 219 ~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~ 297 (508)
T 3r64_A 219 IGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAF-LHQGQICMSI 297 (508)
T ss_dssp THHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TSTTCTTTCC
T ss_pred HHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHH-hcCCCCcccC
Confidence 999999996 9999999999999999999998 89999999999999999999999999999999999 9999999999
Q ss_pred CeEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccCCCCccccceEe
Q 015920 169 DHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLL 246 (398)
Q Consensus 169 ~~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~~~~~~Ptvl 246 (398)
+|||||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++++ |+++++||.. .|+|++|||+
T Consensus 298 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl 375 (508)
T 3r64_A 298 NRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI--EGRLVHPHVF 375 (508)
T ss_dssp SEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE--ETTEECCEEE
T ss_pred cEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC--CCcEEecEEE
Confidence 9999999999999999999999999999998 8999999999999999999999875 6799999975 6899999999
Q ss_pred ecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCC
Q 015920 247 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 326 (398)
Q Consensus 247 ~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~p 326 (398)
.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+ ..+.+|
T Consensus 376 ~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~P 454 (508)
T 3r64_A 376 SDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVN-DEPHVM 454 (508)
T ss_dssp EEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC-----------
T ss_pred ecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997654 468899
Q ss_pred ccccCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 015920 327 FGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 358 (398)
Q Consensus 327 fGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 358 (398)
|||+|.||+|+++|++++++||+.|+|+++..
T Consensus 455 fGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 455 FGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486 (508)
T ss_dssp ----------CCCHHHHHHHTEEEEEEEEECC
T ss_pred cCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence 99999999999999999999999999988754
No 33
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=6.4e-81 Score=637.33 Aligned_cols=335 Identities=21% Similarity=0.401 Sum_probs=320.8
Q ss_pred cceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeCChHhHHH
Q 015920 17 SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSA 95 (398)
Q Consensus 17 ~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g~~~~~~~ 95 (398)
..+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++.+++++++++ +|+|++|+++|+.+.++.
T Consensus 150 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~ 229 (501)
T 1uxt_A 150 EGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEK 229 (501)
T ss_dssp EEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHH
T ss_pred eEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHH
Confidence 5689999999999999999999999999999999999999999999999999999999999 999999999996588899
Q ss_pred HHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeEEEe
Q 015920 96 LLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT 174 (398)
Q Consensus 96 L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~ 174 (398)
|++|+ +|+|.||||+++|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||
T Consensus 230 L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~ 306 (501)
T 1uxt_A 230 IVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAE 306 (501)
T ss_dssp HHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEE
T ss_pred HHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-cCCCCCCcCCcEEEec
Confidence 99995 999999999999999999887 8999999999999999999999999999999999 9999999999999999
Q ss_pred CCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccCCCC-ccccceEeecCC-
Q 015920 175 KDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDKNK-LRIAPTLLLDVP- 250 (398)
Q Consensus 175 ~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~~-~~~~Ptvl~~~~- 250 (398)
++++|+|+++|+++++++++|||.+ ++++||+++++++++++++++++.+ |+++++||.. .| +|++|||+.+++
T Consensus 307 ~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~ 384 (501)
T 1uxt_A 307 RPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR--LGPTYVQPTFVEAPAD 384 (501)
T ss_dssp HHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB--CSSSCBCCEEEECCHH
T ss_pred cchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCEEEeCCCC
Confidence 9999999999999999999999998 8999999999999999999999865 6799999976 57 999999999999
Q ss_pred --CCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCcc
Q 015920 251 --RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 328 (398)
Q Consensus 251 --~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfG 328 (398)
+||++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.+ +...+.+|||
T Consensus 385 ~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfG 463 (501)
T 1uxt_A 385 RVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMP-RHGIGYYPFG 463 (501)
T ss_dssp HHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCC-CCTTSSSCBC
T ss_pred CCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCC-CCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999863 3346889999
Q ss_pred ccCCCCCCCcchHHHHHhhhhceEEEEeC
Q 015920 329 GVQESGMGAYHGKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 329 G~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 357 (398)
|+|.||+|+++|.+++++||+.|+|+.+.
T Consensus 464 G~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 492 (501)
T 1uxt_A 464 GRKKSGVFREGIGYAVEAVTAYKTIVFNY 492 (501)
T ss_dssp CEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred CcCCCCCCccChHHHHHHhCceeEEEEec
Confidence 99999999999999999999999998864
No 34
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1e-80 Score=636.10 Aligned_cols=338 Identities=18% Similarity=0.284 Sum_probs=319.9
Q ss_pred cceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHh----h-cCCCCcEEEeCChH
Q 015920 17 SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE----Y-MDLSSIRVVEGAVA 91 (398)
Q Consensus 17 ~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~----a-lp~g~v~~v~g~~~ 91 (398)
..+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.+ + +|+|++|+|+|+.+
T Consensus 150 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~ 229 (500)
T 2j6l_A 150 ALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGAD 229 (500)
T ss_dssp EEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHH
T ss_pred eeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHH
Confidence 356889999999999999999999999999999999999999999999999999888765 4 99999999999878
Q ss_pred hHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCe
Q 015920 92 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 170 (398)
Q Consensus 92 ~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~ 170 (398)
.++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 230 ~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 308 (500)
T 2j6l_A 230 IGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAV-GTAGQRCTTARR 308 (500)
T ss_dssp HHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEE
T ss_pred HHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCcCCCcE
Confidence 899999985 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCcc-CCCCccccceEee
Q 015920 171 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGER-DKNKLRIAPTLLL 247 (398)
Q Consensus 171 v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~~~~~~Ptvl~ 247 (398)
||||++++|+|+++|++++++++.|||.+ .+++||+++++++++++++++++++ |+++++||.. +..|+|++|||+.
T Consensus 309 vlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~ 388 (500)
T 2j6l_A 309 LFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVT 388 (500)
T ss_dssp EEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEE
T ss_pred EEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEE
Confidence 99999999999999999999999999998 8999999999999999999999865 6789999976 3468999999999
Q ss_pred cCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH--hhcceeeEEEcCCCcccCCCCC
Q 015920 248 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV--ETVSAGGLVINDTAVHLAVHSL 325 (398)
Q Consensus 248 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~--~~l~~g~V~iN~~~~~~~~~~~ 325 (398)
+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++ .++++|+|+||+... ...+.+
T Consensus 389 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~-~~~~~~ 467 (500)
T 2j6l_A 389 GLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTS-GAEIGG 467 (500)
T ss_dssp SCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTT-CCCTTS
T ss_pred CCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCc-cCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999 779999999998653 235679
Q ss_pred CccccCCCCCCCcchHHHHHhhhhceEEEEe
Q 015920 326 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 356 (398)
Q Consensus 326 pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 356 (398)
||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 468 PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 468 AFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp EECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred CcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999874
No 35
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=3.3e-81 Score=637.84 Aligned_cols=339 Identities=27% Similarity=0.474 Sum_probs=324.1
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEe---C-C
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVE---G-A 89 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~---g-~ 89 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+ | +
T Consensus 137 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~ 216 (487)
T 2w8n_A 137 DRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNA 216 (487)
T ss_dssp TCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHH
T ss_pred CceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCc
Confidence 456789999999999999999999999999999999999999999999999999999999999 9999999999 8 5
Q ss_pred hHhHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccC
Q 015920 90 VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISP 168 (398)
Q Consensus 90 ~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~ 168 (398)
.+.++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++
T Consensus 217 ~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~ 295 (487)
T 2w8n_A 217 KEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKF-RNTGQTCVCS 295 (487)
T ss_dssp HHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHT-CCCSCCCSEE
T ss_pred HHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCccccC
Confidence 67889999996 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CeEEEeCCchHHHHHHHHHHHhh-hcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccCCCCc-cccce
Q 015920 169 DHIITTKDYAPKLLESLKNELEN-FYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDKNKL-RIAPT 244 (398)
Q Consensus 169 ~~v~V~~~i~~~f~~~l~~~~~~-l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~~~-~~~Pt 244 (398)
+|||||++++|+|+++|++++++ +++|||.+ ++++||+++++++++++++++++.+ |+++++||..+..|+ |++||
T Consensus 296 ~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Pt 375 (487)
T 2w8n_A 296 NQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPT 375 (487)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCE
T ss_pred CEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCE
Confidence 99999999999999999999999 99999998 8999999999999999999999865 678999997655688 99999
Q ss_pred EeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCC
Q 015920 245 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS 324 (398)
Q Consensus 245 vl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~ 324 (398)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+ .+.
T Consensus 376 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~ 453 (487)
T 2w8n_A 376 LLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS--SVE 453 (487)
T ss_dssp EEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCC--CTT
T ss_pred EEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCC--CCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997654 467
Q ss_pred CCccccCCCCCCCcchHHHHHhhhhceEEEEe
Q 015920 325 LPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 356 (398)
Q Consensus 325 ~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 356 (398)
+||||+|.||+|+++|.+++++||+.|+|+.+
T Consensus 454 ~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 454 CPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp SCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred CCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 99999999999999999999999999999864
No 36
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.2e-80 Score=634.32 Aligned_cols=339 Identities=23% Similarity=0.409 Sum_probs=301.9
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHH-HHHHHHHHhh-cCCCCcEEEeCCh-H
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS-SLLAKLVGEY-MDLSSIRVVEGAV-A 91 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~-~~l~~~~~~a-lp~g~v~~v~g~~-~ 91 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ .++.+++.++ +|+|++|+++|+. +
T Consensus 134 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~ 213 (485)
T 4dng_A 134 GKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKE 213 (485)
T ss_dssp TEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHH
T ss_pred CceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChh
Confidence 35678999999999999999999999999999999999999999999999999 9999999999 9999999999955 5
Q ss_pred hHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCe
Q 015920 92 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 170 (398)
Q Consensus 92 ~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~ 170 (398)
.+++|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 214 ~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~r 292 (485)
T 4dng_A 214 IGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKF-IHQGQICMIINR 292 (485)
T ss_dssp HTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHT-TCC----CCEEE
T ss_pred HHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCccccCCE
Confidence 889999996 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccCCCCccccceEeec
Q 015920 171 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLD 248 (398)
Q Consensus 171 v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~~~~~~Ptvl~~ 248 (398)
||||++++|+|+++|+++++++++|+|.+ .+++||+++++++++++++++++++ |+++++||.. .|+|++|||+.+
T Consensus 293 vlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~--~g~~~~Ptvl~~ 370 (485)
T 4dng_A 293 IIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR--VGNVLTPYVFVG 370 (485)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEES
T ss_pred EEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC--CCcEECCEEEec
Confidence 99999999999999999999999999998 8999999999999999999999865 7899999976 689999999999
Q ss_pred CCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCcc
Q 015920 249 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 328 (398)
Q Consensus 249 ~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfG 328 (398)
++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+ ..+.+|||
T Consensus 371 v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~pfG 449 (485)
T 4dng_A 371 ADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVN-DSPNIAFG 449 (485)
T ss_dssp CCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC------------
T ss_pred CCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999997644 46889999
Q ss_pred ccCCCCCCCcchHHHHHhhhhceEEEEeC
Q 015920 329 GVQESGMGAYHGKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 329 G~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 357 (398)
|+|.||+|+++|.+++++||+.|+|+++.
T Consensus 450 G~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 450 GNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp -----------CHHHHHHHEEEEEEEEEC
T ss_pred CcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999999999999999999999998864
No 37
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=5.2e-80 Score=627.84 Aligned_cols=334 Identities=26% Similarity=0.449 Sum_probs=319.2
Q ss_pred Ccc-eEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeCC-hHh
Q 015920 16 SSA-EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGA-VAE 92 (398)
Q Consensus 16 ~~~-~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g~-~~~ 92 (398)
... +++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+++++++++ +|+|++|+++|+ .+.
T Consensus 134 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~ 213 (475)
T 1euh_A 134 KKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEI 213 (475)
T ss_dssp TEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHH
T ss_pred ceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHH
Confidence 345 89999999999999999999999999999999999999999999999999999999999 999999999995 568
Q ss_pred HHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeE
Q 015920 93 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 171 (398)
Q Consensus 93 ~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v 171 (398)
++.|++|+ +|+|.||||+++|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||
T Consensus 214 ~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv 290 (475)
T 1euh_A 214 GDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRV 290 (475)
T ss_dssp HHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCSSSEEEE
T ss_pred HHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCCCCcEE
Confidence 89999996 999999999999999999887 8999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccCCCCccccceEeecCC
Q 015920 172 ITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLDVP 250 (398)
Q Consensus 172 ~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~~~~~~Ptvl~~~~ 250 (398)
|||++++|+|+++|+++++++++|||.+.+++||+++++++++++++++++.+ |+++++||.. .|+|++|||+.+++
T Consensus 291 ~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~ 368 (475)
T 1euh_A 291 LVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR--EGNLICPILFDKVT 368 (475)
T ss_dssp EEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE--ETTEECCEEEESCC
T ss_pred EEehhHHHHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCceeCCEEEeCCC
Confidence 99999999999999999999999999989999999999999999999999864 6789999875 58999999999999
Q ss_pred CCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcC-CCcccCCCCCCccc
Q 015920 251 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND-TAVHLAVHSLPFGG 329 (398)
Q Consensus 251 ~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~-~~~~~~~~~~pfGG 329 (398)
++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+ +..+ .+.+||||
T Consensus 369 ~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~--~~~~pfGG 446 (475)
T 1euh_A 369 TDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG--TDNFPFLG 446 (475)
T ss_dssp TTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC--STTSCBCC
T ss_pred CcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC--CCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998 6543 57899999
Q ss_pred cCCCCCCCcchHHHHHhhhhceEEEEe
Q 015920 330 VQESGMGAYHGKFSFDVFSHKKAVLSR 356 (398)
Q Consensus 330 ~~~SG~G~~~g~~~l~~~t~~k~v~~~ 356 (398)
+|.||+|+++|.+++++||+.|+|+.+
T Consensus 447 ~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 447 AKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp EETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred CCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 999999999999999999999999875
No 38
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=7.1e-80 Score=628.18 Aligned_cols=340 Identities=25% Similarity=0.375 Sum_probs=323.2
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeCChHhH
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAET 93 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g~~~~~ 93 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+++++++++ +|+|++|+++|+.+.+
T Consensus 132 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~ 211 (486)
T 1t90_A 132 DVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVV 211 (486)
T ss_dssp TEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHH
T ss_pred CceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHH
Confidence 345688999999999999999999999999999999999999999999999999999999998 9999999999988889
Q ss_pred HHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCe-E
Q 015920 94 SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-I 171 (398)
Q Consensus 94 ~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~-v 171 (398)
.+|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++| |
T Consensus 212 ~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvv 290 (486)
T 1t90_A 212 NGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAF-GSAGERCMACAVVT 290 (486)
T ss_dssp HHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEE
T ss_pred HHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHH-hCCCCCcccCCeeE
Confidence 9999996 999999999999999999999999999999999999999999999999999999999 999999999999 9
Q ss_pred EEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccC--CCCccccceEee
Q 015920 172 ITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD--KNKLRIAPTLLL 247 (398)
Q Consensus 172 ~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~--~~~~~~~Ptvl~ 247 (398)
|||++ +|+|+++|+++++++++|||.+ ++++||+++++++++++++++++.+ |+++++||... ..|+|++|||+.
T Consensus 291 ~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~ 369 (486)
T 1t90_A 291 VEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFD 369 (486)
T ss_dssp EEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEE
T ss_pred EecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEe
Confidence 99999 9999999999999999999998 8999999999999999999999864 78999999742 358999999999
Q ss_pred cCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCc
Q 015920 248 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 327 (398)
Q Consensus 248 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pf 327 (398)
+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.. ....+.+||
T Consensus 370 ~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~-~~~~~~~Pf 448 (486)
T 1t90_A 370 NVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGV-PAPMAFFPF 448 (486)
T ss_dssp SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC-CCCCTTSCC
T ss_pred CCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCC-CCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999854 333578999
Q ss_pred cccCCCCCC--CcchHHHHHhhhhceEEEEeC
Q 015920 328 GGVQESGMG--AYHGKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 328 GG~~~SG~G--~~~g~~~l~~~t~~k~v~~~~ 357 (398)
||+|.||+| +++|.+|+++||+.|+|+.+.
T Consensus 449 GG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 449 SGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp CCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 999999999 899999999999999998764
No 39
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=4.3e-80 Score=629.23 Aligned_cols=336 Identities=26% Similarity=0.485 Sum_probs=298.9
Q ss_pred CcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChHhH
Q 015920 16 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAET 93 (398)
Q Consensus 16 ~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~~~ 93 (398)
...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+++++++++ +|+|++|+++| +.+.+
T Consensus 131 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~ 210 (478)
T 3ty7_A 131 GDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVG 210 (478)
T ss_dssp TTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTH
T ss_pred ccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999 99999999999 66899
Q ss_pred HHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeEE
Q 015920 94 SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 172 (398)
Q Consensus 94 ~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v~ 172 (398)
+.|+.|+ +|+|.||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||
T Consensus 211 ~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvl 289 (478)
T 3ty7_A 211 NPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVV-NNTGQVCTAGTRVL 289 (478)
T ss_dssp HHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEE
T ss_pred HHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHH-HhCCCCccCCCeEE
Confidence 9999996 999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH-hcCeeeecCccC----CCCccccceEe
Q 015920 173 TTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD----KNKLRIAPTLL 246 (398)
Q Consensus 173 V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~~~~v~~gg~~~----~~~~~~~Ptvl 246 (398)
||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++. +|+++++||... ..|+|++|||+
T Consensus 290 V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl 369 (478)
T 3ty7_A 290 VPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIF 369 (478)
T ss_dssp EETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEE
T ss_pred EcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEE
Confidence 999999999999999999999999998 899999999999999999999986 478999998432 36899999999
Q ss_pred ecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCC
Q 015920 247 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 326 (398)
Q Consensus 247 ~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~p 326 (398)
.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+ . ...+.+|
T Consensus 370 ~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~--~~~~~~P 446 (478)
T 3ty7_A 370 INVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-A--GRKPDLP 446 (478)
T ss_dssp ESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-C--C------
T ss_pred ecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-C--CCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 2 2357899
Q ss_pred ccccCCCCCCCcchHHHHHhhhhceEEEE
Q 015920 327 FGGVQESGMGAYHGKFSFDVFSHKKAVLS 355 (398)
Q Consensus 327 fGG~~~SG~G~~~g~~~l~~~t~~k~v~~ 355 (398)
|||+|.||+|+++|++++++||+.|+|+.
T Consensus 447 fGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 447 FGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp ----------------CCGGGEEEEEEET
T ss_pred cCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 99999999999999999999999999873
No 40
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=7.5e-79 Score=627.74 Aligned_cols=348 Identities=21% Similarity=0.315 Sum_probs=323.9
Q ss_pred cceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeCC-hHhHH
Q 015920 17 SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGA-VAETS 94 (398)
Q Consensus 17 ~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g~-~~~~~ 94 (398)
..++++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++.+++++++++ +|+|++|+|+|+ .+.++
T Consensus 193 ~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~ 271 (563)
T 4e3x_A 193 NHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGD 271 (563)
T ss_dssp EEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHH
T ss_pred ceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHH
Confidence 355677788999999999999999999999999 599999999999999999999999999 999999999995 56789
Q ss_pred HHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCc------hhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCcccc
Q 015920 95 ALLDQK-WDKICYTGNSRVARIVMAAAAKHLTP------VLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 167 (398)
Q Consensus 95 ~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~------v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a 167 (398)
.|++|+ +|+|.||||+++|+.|.+.++++++| +++|+|||||+||++|||++.|++.+++++| .|+||.|++
T Consensus 272 ~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f-~~~GQ~C~A 350 (563)
T 4e3x_A 272 TVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAF-EYGGQKCSA 350 (563)
T ss_dssp HHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTC
T ss_pred HHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHH-hcCCCCCcC
Confidence 999995 99999999999999999999999885 9999999999999999999999999999999 999999999
Q ss_pred CCeEEEeCCchHHHHHHHHHHHhhhcCCCC-CC-CCcccccCCHHHHHHHHHHHHHHH--hcCeeeecCccC-CCCcccc
Q 015920 168 PDHIITTKDYAPKLLESLKNELENFYGKNP-LE-SKDLSRIVNSNHFARLSKLLDDDK--VSGKIVHGGERD-KNKLRIA 242 (398)
Q Consensus 168 ~~~v~V~~~i~~~f~~~l~~~~~~l~~g~p-~~-~~~~gpl~~~~~~~~~~~~i~~a~--~~~~v~~gg~~~-~~~~~~~ 242 (398)
++|||||++++|+|+++|+++++++++||| .+ ++++||+++++++++++++|++++ .++++++||..+ ..|+|++
T Consensus 351 ~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~ 430 (563)
T 4e3x_A 351 CSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVE 430 (563)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEEC
T ss_pred CcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEec
Confidence 999999999999999999999999999999 88 899999999999999999999997 367999999764 3689999
Q ss_pred ceEeecCCCCCcccccccccceeeEEeeCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHHHHhhcc--eeeEEEcCCC
Q 015920 243 PTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII-NSGTKPLAAYLFTNNKKLKQQFVETVS--AGGLVINDTA 317 (398)
Q Consensus 243 Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~glsasv~t~d~~~~~~~~~~l~--~g~V~iN~~~ 317 (398)
|||+.+++++|++++||+||||++|++|+| +||||+++ |+++|||+++|||+|.+++++++++++ +|+|+||+.+
T Consensus 431 PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~ 510 (563)
T 4e3x_A 431 PCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKS 510 (563)
T ss_dssp CEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCS
T ss_pred CEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCC
Confidence 999999999999999999999999999996 79999999 789999999999999999999999975 9999999977
Q ss_pred cccCCCCCCccccCCCCCC-CcchHHHHHhhhhceEEEEeCCCCCCCccCC
Q 015920 318 VHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRGFIGDVPVRYP 367 (398)
Q Consensus 318 ~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~ 367 (398)
++...+.+||||+|.||+| +.+|.++|++|++.|+|..+ +..+..++||
T Consensus 511 ~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~-~~~~~~~~yp 560 (563)
T 4e3x_A 511 TGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET-HKPLGDWRYS 560 (563)
T ss_dssp CCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE-CSCCCCSSCT
T ss_pred CCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe-CcCCCcccCC
Confidence 6666788999999999998 89999999999999999876 4344455664
No 41
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=8.6e-77 Score=643.99 Aligned_cols=343 Identities=21% Similarity=0.354 Sum_probs=326.8
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 92 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g-~~~~ 92 (398)
+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+| +.+.
T Consensus 657 g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~v 736 (1026)
T 4f9i_A 657 GELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVM 736 (1026)
T ss_dssp TEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHH
T ss_pred CccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHH
Confidence 446778999999999999999999999999999999999999999999999999999999999 99999999999 5678
Q ss_pred HHHHHhcC-CCEEEEeCCHHHHHHHHHHHh------hccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCcc
Q 015920 93 TSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 165 (398)
Q Consensus 93 ~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~------~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C 165 (398)
++.|++|+ +|+|+||||+++|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++|+| .|+||.|
T Consensus 737 g~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf-~~aGQ~C 815 (1026)
T 4f9i_A 737 GDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAF-GFQGQKC 815 (1026)
T ss_dssp HHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCST
T ss_pred HHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCCC
Confidence 99999996 999999999999999999988 478999999999999999999999999999999999 9999999
Q ss_pred ccCCeEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHhcCeeeecCccCCC-Cccccc
Q 015920 166 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKN-KLRIAP 243 (398)
Q Consensus 166 ~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~-~~~~~P 243 (398)
++++|+|||++++|+|+++|+++++++++|||.+ ++++||+++++++++++++|+++++.+++++||..+.. |+|++|
T Consensus 816 ~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G~~v~gG~~~~~~G~fv~P 895 (1026)
T 4f9i_A 816 SACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPM 895 (1026)
T ss_dssp TCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHSEEEEECCCCSSSSCCCCC
T ss_pred CCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCCeEEecCCcCCCCCceecc
Confidence 9999999999999999999999999999999999 89999999999999999999999876699999976555 999999
Q ss_pred eEeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCC
Q 015920 244 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH 323 (398)
Q Consensus 244 tvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~ 323 (398)
||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+++...+
T Consensus 896 Tvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~ 975 (1026)
T 4f9i_A 896 TIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVE 975 (1026)
T ss_dssp EEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTT
T ss_pred eeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987766678
Q ss_pred CCCccccCCCCCCC-cchHHHHHhhhhceEEEEeCC
Q 015920 324 SLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSRGF 358 (398)
Q Consensus 324 ~~pfGG~~~SG~G~-~~g~~~l~~~t~~k~v~~~~~ 358 (398)
.+||||+|.||+|+ .+|++++++|++.|+|+.+..
T Consensus 976 ~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~~ 1011 (1026)
T 4f9i_A 976 RQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENTM 1011 (1026)
T ss_dssp TSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEECC
T ss_pred CCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEecc
Confidence 89999999999995 689999999999999988753
No 42
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.8e-76 Score=603.66 Aligned_cols=334 Identities=23% Similarity=0.325 Sum_probs=315.4
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeCChHhH
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAET 93 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g~~~~~ 93 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+++|+.+.+
T Consensus 130 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~ 209 (490)
T 3ju8_A 130 DATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETG 209 (490)
T ss_dssp TEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHH
T ss_pred CCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHH
Confidence 345678899999999999999999999999999999999999999999999999999999998 9999999999988999
Q ss_pred HHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCch-hhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCeE
Q 015920 94 SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPV-LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 171 (398)
Q Consensus 94 ~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v-~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~v 171 (398)
++|++|+ +|+|.||||+++|+.|++.++++++|+ ++|+|||||+||++|||++.|++.+++++| .|+||.|++++|+
T Consensus 210 ~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rv 288 (490)
T 3ju8_A 210 VALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAF-ISAGQRCTCARRL 288 (490)
T ss_dssp HHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHH-GGGGCSTTSEEEE
T ss_pred HHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCCEE
Confidence 9999996 999999999999999999999999998 799999999999999999999999999999 9999999999999
Q ss_pred EEeCCc-hHHHHHHHHHHHhhhcCCC-CCC-CCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccC-CCCccccceEe
Q 015920 172 ITTKDY-APKLLESLKNELENFYGKN-PLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD-KNKLRIAPTLL 246 (398)
Q Consensus 172 ~V~~~i-~~~f~~~l~~~~~~l~~g~-p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~~~~~~Ptvl 246 (398)
|||+++ +|+|+++|+++++++++|| |.+ .+++||+++++++++++++++++.+ |+++++||... ..|+|++|||+
T Consensus 289 lV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl 368 (490)
T 3ju8_A 289 LVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGIL 368 (490)
T ss_dssp EEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEE
T ss_pred EEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEE
Confidence 999996 9999999999999999999 888 8999999999999999999999864 78999998653 47899999999
Q ss_pred ecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCC
Q 015920 247 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 326 (398)
Q Consensus 247 ~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~p 326 (398)
. ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ...+.+|
T Consensus 369 ~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~-~~~~~~P 446 (490)
T 3ju8_A 369 D-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLT-GAASSAP 446 (490)
T ss_dssp E-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSS-CCCTTSE
T ss_pred E-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcC-CCCCCCC
Confidence 9 9999999999999999999999999999999999999999999999999999999999999999999754 3357899
Q ss_pred ccccCCCCCCCcchHHHHHhhhhceEEEEeC
Q 015920 327 FGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 327 fGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 357 (398)
|||+|.||.+ ++++|++.|+|++..
T Consensus 447 fGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 447 FGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp ECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred cCCccccchh------HHHhhheeEEEEEec
Confidence 9999999974 589999999988764
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=3.4e-76 Score=607.51 Aligned_cols=336 Identities=18% Similarity=0.289 Sum_probs=310.4
Q ss_pred ceEeeecc-eEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh--cCCCCcEEEeCChHhHH
Q 015920 18 AEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETS 94 (398)
Q Consensus 18 ~~~~~~P~-GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a--lp~g~v~~v~g~~~~~~ 94 (398)
.++.++|+ |||++|+|||||+++.++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|+.+
T Consensus 144 ~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~--- 220 (534)
T 2y53_A 144 AQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSA--- 220 (534)
T ss_dssp EEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCT---
T ss_pred ceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChH---
Confidence 57889997 9999999999999999999999999999999999999999999999999986 59999999998532
Q ss_pred HHHhc--CCCEEEEeCCHHHHHHHHHHHh--hccCchhhccCCCCcEEEeCCC-----CHHHHHHHHHHhhhccCCCCcc
Q 015920 95 ALLDQ--KWDKICYTGNSRVARIVMAAAA--KHLTPVLLELGGKSPVVFDSGI-----NLKVACRRMIMGKWGCNNGQAC 165 (398)
Q Consensus 95 ~L~~~--~v~~v~ftGs~~~g~~i~~~~~--~~~~~v~~elgG~~p~iV~~da-----Dl~~aa~~i~~~~~~~~~GQ~C 165 (398)
.+.++ .+|+|.||||+++|+.|++.++ +++||+++|||||||+||++|| |++.|++.+++++| .|+||.|
T Consensus 221 ~l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C 299 (534)
T 2y53_A 221 GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMT-VKSGQKC 299 (534)
T ss_dssp TSGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCT
T ss_pred HHHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHH-hCCCCcc
Confidence 24444 4999999999999999998765 8899999999999999999999 99999999999999 9999999
Q ss_pred ccCCeEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHhcCeeeecCccC-------CC
Q 015920 166 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD-------KN 237 (398)
Q Consensus 166 ~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~-------~~ 237 (398)
++++|||||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++.+++++++||... ..
T Consensus 300 ~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~ 379 (534)
T 2y53_A 300 TAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANI 379 (534)
T ss_dssp TSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTT
T ss_pred cCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHHHcCCEEEECCcccccccccCCC
Confidence 9999999999999999999999999999999999 899999999999999999999986688999998642 35
Q ss_pred CccccceEeecCCCC--CcccccccccceeeEEeeC---CH-----HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc-
Q 015920 238 KLRIAPTLLLDVPRD--SLIMSEEIFGPLLPILTVD---KI-----EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV- 306 (398)
Q Consensus 238 ~~~~~Ptvl~~~~~~--~~i~~eE~fgPvl~v~~~~---~~-----~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l- 306 (398)
|+|++|||+.+++++ |++++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.++++++++++
T Consensus 380 g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~ 459 (534)
T 2y53_A 380 AACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELA 459 (534)
T ss_dssp SCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHT
T ss_pred CceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHH
Confidence 899999999999887 6899999999999999999 99 999999999999999999999999999999999
Q ss_pred -ceeeEEEcCCCcc-------cCCCCCCccccCCCCCCCc-chHHHHHhhhhceEEEEeC
Q 015920 307 -SAGGLVINDTAVH-------LAVHSLPFGGVQESGMGAY-HGKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 307 -~~g~V~iN~~~~~-------~~~~~~pfGG~~~SG~G~~-~g~~~l~~~t~~k~v~~~~ 357 (398)
++|+|+||++... ...+.+||||+|.||+|++ +|.+++++|++.|++...+
T Consensus 460 ~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 460 DSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAAS 519 (534)
T ss_dssp TTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEEH
T ss_pred hhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecCH
Confidence 8999999986421 2357899999999999999 6999999999999988654
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=3.1e-75 Score=630.56 Aligned_cols=340 Identities=22% Similarity=0.363 Sum_probs=321.2
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCCcEEEeCChHhH
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAET 93 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~a-lp~g~v~~v~g~~~~~ 93 (398)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+|+|+.+.+
T Consensus 640 g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~g 719 (1001)
T 3haz_A 640 GESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRIG 719 (1001)
T ss_dssp TEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHHH
T ss_pred CCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchHH
Confidence 456788999999999999999999999999999999999999999999999999999999998 9999999999965559
Q ss_pred HHHHhcC-CCEEEEeCCHHHHHHHHHHHhhc---cCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCC
Q 015920 94 SALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 169 (398)
Q Consensus 94 ~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~---~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~ 169 (398)
..|++|+ +|+|+||||+++|+.|++.++++ ++|+++|+|||||+||++|||++.|++.+++|+| .|+||.|++++
T Consensus 720 ~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f-~naGQ~C~A~~ 798 (1001)
T 3haz_A 720 AALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAF-RSAGQRCSALR 798 (1001)
T ss_dssp HHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEE
T ss_pred HHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHH-hCCCCCCCCCc
Confidence 9999996 99999999999999999998864 8999999999999999999999999999999999 99999999999
Q ss_pred eEEEeCCchHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHhcCeeeecCccCCCCccccceEeec
Q 015920 170 HIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLD 248 (398)
Q Consensus 170 ~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Ptvl~~ 248 (398)
+||||++++|+|+++|+++++++++|||.+ .+++||+++++++++++++++++++++++ +||..+..|+|++|||+.+
T Consensus 799 rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v-~gg~~~~~G~fv~PTvl~~ 877 (1001)
T 3haz_A 799 LLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL-HFAGPAPEGCFVAPHIFEL 877 (1001)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE-EEECCCCSSSCCCCEEEEC
T ss_pred eeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE-eccccCCCCcEEeeEEecC
Confidence 999999999999999999999999999998 89999999999999999999998776788 8888766799999999984
Q ss_pred CCCCCcccccccccceeeEEeeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCC
Q 015920 249 VPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 326 (398)
Q Consensus 249 ~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~p 326 (398)
.++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+.+...+.+|
T Consensus 878 --~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~P 955 (1001)
T 3haz_A 878 --TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQP 955 (1001)
T ss_dssp --SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSC
T ss_pred --CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCC
Confidence 6788999999999999999986 799999999999999999999999999999999999999999987666677899
Q ss_pred ccccCCCCCC-CcchHHHHHhhhhceEEEEeCC
Q 015920 327 FGGVQESGMG-AYHGKFSFDVFSHKKAVLSRGF 358 (398)
Q Consensus 327 fGG~~~SG~G-~~~g~~~l~~~t~~k~v~~~~~ 358 (398)
|||+|.||+| +.+|++++++|++.|+|+++..
T Consensus 956 FGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~~ 988 (1001)
T 3haz_A 956 FGGNGLSGTGPKAGGPHYLARFATEQTVTINTA 988 (1001)
T ss_dssp BCCCGGGBCCCCBTSTTSGGGGEEEEEEEEECG
T ss_pred CCCcccCcCCCCCCCHHHHHHhceeeEEEECCc
Confidence 9999999999 5688999999999999988653
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.6e-73 Score=582.84 Aligned_cols=329 Identities=18% Similarity=0.253 Sum_probs=303.3
Q ss_pred CcceEeeecceEEEEEcCCchhhHhhH--HHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHH----hh-cCCCCcEEEeC
Q 015920 16 SSAEIVPEPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY-MDLSSIRVVEG 88 (398)
Q Consensus 16 ~~~~~~~~P~GVv~vi~p~n~P~~~~~--~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~----~a-lp~g~v~~v~g 88 (398)
...+++++|+|||++|+|||||+.+.+ +++++||++||+||+|||+.+|.++.++++++. ++ +|+|++|+|+|
T Consensus 161 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g 240 (528)
T 3v4c_A 161 QEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQG 240 (528)
T ss_dssp CCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred CcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeC
Confidence 356889999999999999999999865 899999999999999999999999999998765 45 99999999999
Q ss_pred -ChHhHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhcc--CchhhccCCCCcEEEeCCC---CHHHHHHHHHHhhhccCC
Q 015920 89 -AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLELGGKSPVVFDSGI---NLKVACRRMIMGKWGCNN 161 (398)
Q Consensus 89 -~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~--~~v~~elgG~~p~iV~~da---Dl~~aa~~i~~~~~~~~~ 161 (398)
+.+.+++|++|+ +|+|.||||+++|+.|++.+++++ +|+++|+|||||+||++|| |++.|++.+++++| .|+
T Consensus 241 ~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~ 319 (528)
T 3v4c_A 241 GSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLT-MGA 319 (528)
T ss_dssp CCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGG
T ss_pred CCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHH-hcC
Confidence 678899999996 999999999999999999999999 9999999999999999999 88999999999999 999
Q ss_pred CCccccCCeEEEeCC-chHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCeeeecCccCCCCcc
Q 015920 162 GQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR 240 (398)
Q Consensus 162 GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~l~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~ 240 (398)
||.|++++|||||++ ++|+|+++|++++++++.+ +.+||++++++.+++++++. .+|+++++||.. .|+|
T Consensus 320 GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~-----~~~gp~~~~~~~~~v~~~~~--~~Ga~v~~gG~~--~g~~ 390 (528)
T 3v4c_A 320 GQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ-----TMLTDGIAKAYRDGQARFAT--RNAVKPLLATES--SGRD 390 (528)
T ss_dssp GCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE-----ECSCHHHHHHHHHHHHHHHT--CTTCEEEECCCC--CTTE
T ss_pred CCccccCcEEEEecccHHHHHHHHHHHHHHhcccC-----CCCCHHHHHHHHHHHHHHHH--hCCCEEEeCCCc--CCce
Confidence 999999999999998 9999999999999988643 67899999888888888774 257899999975 6899
Q ss_pred ccceEeecCCCC---CcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecC--CHHHHHHHHhhcc--eeeEEE
Q 015920 241 IAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN--NKKLKQQFVETVS--AGGLVI 313 (398)
Q Consensus 241 ~~Ptvl~~~~~~---~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~--d~~~~~~~~~~l~--~g~V~i 313 (398)
++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+|+|
T Consensus 391 ~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~v 470 (528)
T 3v4c_A 391 ASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLV 470 (528)
T ss_dssp ECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEE
T ss_pred eccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEE
Confidence 999999988887 899999999999999999999999999999999999999999 8999999999998 999999
Q ss_pred cCCCcc-cCCCCCCccc-cCCCCCCCcc--hHHHHHhhhhceEEE
Q 015920 314 NDTAVH-LAVHSLPFGG-VQESGMGAYH--GKFSFDVFSHKKAVL 354 (398)
Q Consensus 314 N~~~~~-~~~~~~pfGG-~~~SG~G~~~--g~~~l~~~t~~k~v~ 354 (398)
|+.++. ...+.+|||| +|.||+|+++ |++|+++|++.|++.
T Consensus 471 N~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q 515 (528)
T 3v4c_A 471 NGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAYQ 515 (528)
T ss_dssp SSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEEE
T ss_pred cCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHhh
Confidence 996543 3458899999 9999999986 999999999998753
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=6.4e-72 Score=572.72 Aligned_cols=325 Identities=17% Similarity=0.233 Sum_probs=298.1
Q ss_pred cceEeeecceEEEEEcCCchhhHhh--HHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHH----hh-cCCCCcEEEeC-
Q 015920 17 SAEIVPEPFGVVLIISPWNYPFLLS--LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY-MDLSSIRVVEG- 88 (398)
Q Consensus 17 ~~~~~~~P~GVv~vi~p~n~P~~~~--~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~----~a-lp~g~v~~v~g- 88 (398)
..+++++|+|||++|+|||||+.+. .+++++||++||+||+|||+.+|+++.++++++. ++ +|+|++|+++|
T Consensus 129 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~ 208 (510)
T 1ez0_A 129 DIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGN 208 (510)
T ss_dssp CEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCS
T ss_pred CceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 3578999999999999999999985 4999999999999999999999999999999984 45 89999999999
Q ss_pred ChHhHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhcc--CchhhccCCCCcEEEeCCCCHH--HHHHHHHHhhhccCCCC
Q 015920 89 AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLELGGKSPVVFDSGINLK--VACRRMIMGKWGCNNGQ 163 (398)
Q Consensus 89 ~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~--~~v~~elgG~~p~iV~~daDl~--~aa~~i~~~~~~~~~GQ 163 (398)
+.+.++.|++|+ +|+|.||||+.+|+.|++.+++++ ||+++|+|||||+||++|||++ .|++.+++++| .|+||
T Consensus 209 ~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ 287 (510)
T 1ez0_A 209 QRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMT-MGCGQ 287 (510)
T ss_dssp CTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGC
T ss_pred cHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCC
Confidence 678899999996 999999999999999999999986 9999999999999999999999 99999999999 99999
Q ss_pred ccccCCeEEEeCC-chHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHH--hcCeeeecCccCCCCcc
Q 015920 164 ACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK--VSGKIVHGGERDKNKLR 240 (398)
Q Consensus 164 ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~l~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~--~~~~v~~gg~~~~~~~~ 240 (398)
.|++++|||||++ ++|+|+++|++++++++. ||++++.+.+++.++++++. .|+++++||. +|+|
T Consensus 288 ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~ 355 (510)
T 1ez0_A 288 FCTKPGVVFALNTPETQAFIETAQSLIRQQSP---------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPC 355 (510)
T ss_dssp CTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC---CTTS
T ss_pred CcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC---CCCE
Confidence 9999999999999 999999999999998864 57888889999999998886 3678999987 3899
Q ss_pred ccceEeecCCCC---CcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCH--HHHHHHHhhc--ceeeEEE
Q 015920 241 IAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK--KLKQQFVETV--SAGGLVI 313 (398)
Q Consensus 241 ~~Ptvl~~~~~~---~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~--~~~~~~~~~l--~~g~V~i 313 (398)
++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+|. ++++++++++ ++|+|+|
T Consensus 356 ~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~i 435 (510)
T 1ez0_A 356 VASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVF 435 (510)
T ss_dssp BCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEE
T ss_pred ecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEE
Confidence 999999988777 99999999999999999999999999999999999999999987 7999999999 7999999
Q ss_pred cCCCccc-CCCCCCccc-cCCCCCCCc--chHHHHHhhhhceEEE
Q 015920 314 NDTAVHL-AVHSLPFGG-VQESGMGAY--HGKFSFDVFSHKKAVL 354 (398)
Q Consensus 314 N~~~~~~-~~~~~pfGG-~~~SG~G~~--~g~~~l~~~t~~k~v~ 354 (398)
|+...+. ..+.+|||| +|.||.|+. +|.+++++|++.|++.
T Consensus 436 N~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 436 NGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred CCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 9865332 246799999 789998754 8999999999887654
No 47
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=7.2e-69 Score=543.74 Aligned_cols=313 Identities=19% Similarity=0.216 Sum_probs=250.3
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHH----h----h-cCCCCcEE
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----E----Y-MDLSSIRV 85 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~----~----a-lp~g~v~~ 85 (398)
+...+++++|+|||++|+||| | .+.++++++||++||+||+|||+.+|.++..++++++ + + +|+|++|+
T Consensus 117 ~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~v 194 (468)
T 1vlu_A 117 GLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQL 194 (468)
T ss_dssp TEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEE
T ss_pred CceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEE
Confidence 345689999999999999999 9 9999999999999999999999999999999999995 7 7 99999999
Q ss_pred EeCCh-HhHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCC
Q 015920 86 VEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 163 (398)
Q Consensus 86 v~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ 163 (398)
|+ +. +.++.|++|+ +|+|.||||+++|+.|++.+ +||+++|+|||||+||++|||++.|++.+++++| .|+|
T Consensus 195 v~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~G- 268 (468)
T 1vlu_A 195 IE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDEDADLIKAKRISLDAKT-NYPA- 268 (468)
T ss_dssp CC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTC-C----
T ss_pred EC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECCCCCHHHHHHHHHHHhc-CCCC-
Confidence 99 65 6788899886 99999999999999999876 6999999999999999999999999999999999 9999
Q ss_pred ccccCCeEEEeCCchHHHHHHHHHHHhhhcC---CCCCCCCcccccCCHHHHHHHHHH-HHHHHhcCeeeecCccCCCCc
Q 015920 164 ACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDLSRIVNSNHFARLSKL-LDDDKVSGKIVHGGERDKNKL 239 (398)
Q Consensus 164 ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~---g~p~~~~~~gpl~~~~~~~~~~~~-i~~a~~~~~v~~gg~~~~~~~ 239 (398)
.|++++|||||+++ |+|+++|+++++++++ |||.+ +++ ++++. ++++||. |
T Consensus 269 ~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------~~~~i~~a~---~~~~gG~----g- 323 (468)
T 1vlu_A 269 GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------KTAYFDKLN---ELGKLTE----A- 323 (468)
T ss_dssp -CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------HHHHHHHHH---HHTCCCH----H-
T ss_pred cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------hcccccccc---eeeccCC----C-
Confidence 99999999999999 9999999999999987 76532 344 55543 4677775 4
Q ss_pred cccceEeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcc
Q 015920 240 RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 319 (398)
Q Consensus 240 ~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~ 319 (398)
++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..
T Consensus 324 -~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~- 399 (468)
T 1vlu_A 324 -IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTR- 399 (468)
T ss_dssp -HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGG-
T ss_pred -CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCC-
Confidence 789997 7889999999999999999999999999999999999999999999999999999999999999999654
Q ss_pred cCCCCCCcc-----ccCCCCCCCcchHHHHHhhhhceEEEEeCCCCCCCccCCCCCh
Q 015920 320 LAVHSLPFG-----GVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTK 371 (398)
Q Consensus 320 ~~~~~~pfG-----G~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~p~~~ 371 (398)
..+..||| |+|.||+|++ |.+++++|++.|+|..+.. ..+ |||+.
T Consensus 400 -~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~----~~r-~py~~ 449 (468)
T 1vlu_A 400 -FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDG----QVA-SDYLG 449 (468)
T ss_dssp -GCC-----------------------CCSGGGEEEEEEEECSS----CCS-CCC--
T ss_pred -CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCC----CcC-ccccc
Confidence 25778999 9999999999 9999999999999988642 455 89974
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.5e-67 Score=534.87 Aligned_cols=322 Identities=17% Similarity=0.243 Sum_probs=292.1
Q ss_pred CCCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHH----HHhh-cCCCCcEEEeC
Q 015920 14 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL----VGEY-MDLSSIRVVEG 88 (398)
Q Consensus 14 ~~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~----~~~a-lp~g~v~~v~g 88 (398)
.+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++ +.++ +|+|++|+|++
T Consensus 98 ~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g 177 (464)
T 3k9d_A 98 NEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTV 177 (464)
T ss_dssp TTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSS
T ss_pred CCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 345678899999999999999999999999999999999999999999999999876654 5677 99999999999
Q ss_pred -ChHhHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccC-CCCcEEEeCCCCHHHHHHHHHHhhhccCCCCcc
Q 015920 89 -AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELG-GKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 165 (398)
Q Consensus 89 -~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elg-G~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C 165 (398)
+.+.+++|++|+ +|+|+||||+. +.+.+++++||+ +|+| ||+|+||++|||++.|++.|++|+| +|+||.|
T Consensus 178 ~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~-~n~Gq~C 251 (464)
T 3k9d_A 178 PTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKT-FDNGTIC 251 (464)
T ss_dssp CCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHT-GGGGCST
T ss_pred CCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHh-cCCCCCC
Confidence 688999999996 99999999998 456677889999 7888 9999999999999999999999999 9999999
Q ss_pred ccCCeEEEeCCchHHHHHHHHHHH-------hhhcCCCCC-C-CCcccccCCHHHHHHHHHHHHHHH-hcCeeeecCccC
Q 015920 166 ISPDHIITTKDYAPKLLESLKNEL-------ENFYGKNPL-E-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD 235 (398)
Q Consensus 166 ~a~~~v~V~~~i~~~f~~~l~~~~-------~~l~~g~p~-~-~~~~gpl~~~~~~~~~~~~i~~a~-~~~~v~~gg~~~ 235 (398)
++++|||||++++|+|+++|+++. +.+++|+|. + .+++||+++.++++++.++++.+. +++++++||..
T Consensus 252 ~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~- 330 (464)
T 3k9d_A 252 ASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET- 330 (464)
T ss_dssp TSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC-
T ss_pred CCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC-
Confidence 999999999999999999999986 455677776 4 789999999999999999998775 47789998853
Q ss_pred CCCccccceEeecCCCCCcccccccccceeeEEeeCCHHHHH----HHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeE
Q 015920 236 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF----DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 311 (398)
Q Consensus 236 ~~~~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai----~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V 311 (398)
++++++++. ||+||||++|++|+|+|||| +++|+++|||+++|||+|.++++++++++++|+|
T Consensus 331 ------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v 397 (464)
T 3k9d_A 331 ------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRL 397 (464)
T ss_dssp ------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEE
T ss_pred ------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEE
Confidence 467788864 89999999999999999997 7999999999999999999999999999999999
Q ss_pred EEcCCCcc-------cCCCCCCccccCCCCCCCcchHHHHHhhhhceEEEEe
Q 015920 312 VINDTAVH-------LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 356 (398)
Q Consensus 312 ~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 356 (398)
+||++..+ ...+.+|||| +.+|.|+++|..++++|++.|+|...
T Consensus 398 ~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 398 LVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp EESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred EEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 99997643 2568899998 78999999999999999999999764
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.1e-67 Score=528.08 Aligned_cols=305 Identities=22% Similarity=0.233 Sum_probs=256.0
Q ss_pred CcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhhc----CCCCcEEEeCChH
Q 015920 16 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM----DLSSIRVVEGAVA 91 (398)
Q Consensus 16 ~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~al----p~g~v~~v~g~~~ 91 (398)
...+++++|+|||++|+||| |.+.+ +++++||++||+||+|||+.+|.++.+++++++++| |+|++|+|+|+.+
T Consensus 132 ~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~ 209 (463)
T 2h5g_A 132 LELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREE 209 (463)
T ss_dssp EEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCC
T ss_pred ceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHH
Confidence 35689999999999999777 77766 899999999999999999999999999999999986 5999999999767
Q ss_pred hHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccCCe
Q 015920 92 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 170 (398)
Q Consensus 92 ~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~~~ 170 (398)
.++.|+.|+ +|+|.||||+.+|+.|++.++ +||+++|||||||+||++|||++.|++.+++++| .| ||.|++++|
T Consensus 210 ~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~r 285 (463)
T 2h5g_A 210 VEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALET 285 (463)
T ss_dssp C-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEE
T ss_pred HHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcE
Confidence 899999996 999999999999999999887 8999999999999999999999999999999999 88 999999999
Q ss_pred EEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccCCCCccccceEeecC
Q 015920 171 IITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLDV 249 (398)
Q Consensus 171 v~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~~~~~~Ptvl~~~ 249 (398)
||||++++| +|+ ++ ++++++.+ |++++.|+.....++| +
T Consensus 286 vlV~~~i~d------------------------~p~-----~~---~~i~~~~~~Ga~v~~G~~~~~~g~~--------~ 325 (463)
T 2h5g_A 286 LLIHRDLLR------------------------TPL-----FD---QIIDMLRVEQVKIHAGPKFASYLTF--------S 325 (463)
T ss_dssp EEEEGGGTT------------------------SHH-----HH---HHHHHHHHTTCEEEECHHHHC-------------
T ss_pred EEEeccccc------------------------hHH-----HH---HHHHHHHhCCCEEEeCCcccccCcc--------C
Confidence 999999998 122 22 23555543 6677744432223444 2
Q ss_pred CCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCccc
Q 015920 250 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 329 (398)
Q Consensus 250 ~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pfGG 329 (398)
+++|++++||+||||++|++|+|+||||+++|++++||++||||+|.++++++++++++|+|+||++.. ..+.+||||
T Consensus 326 ~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG 403 (463)
T 2h5g_A 326 PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTR--FSDGYRFGL 403 (463)
T ss_dssp ----CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTTTTS
T ss_pred CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCcc--CCCCCCCCC
Confidence 678999999999999999999999999999999999999999999999999999999999999999654 357899999
Q ss_pred cCCCCCC--Cc--chHHHHHhhhhceEEEEeCCCCCCCccCCCCChhH
Q 015920 330 VQESGMG--AY--HGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGK 373 (398)
Q Consensus 330 ~~~SG~G--~~--~g~~~l~~~t~~k~v~~~~~~~~~~~~~~p~~~~~ 373 (398)
+|.||+| ++ +|.+++++||+.|+|+.+.. ..+ |||+..|
T Consensus 404 ~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~----~~r-~~y~~~~ 446 (463)
T 2h5g_A 404 GAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD----HVV-SDFSEHG 446 (463)
T ss_dssp SCCSCEECCSSSCCEECCGGGGEEEEEEEECSS----CCG-GGGSTTS
T ss_pred CccCcCCCCcccCCCHHHHHHhceeEEEEECCC----ccc-CCccccc
Confidence 9999999 65 99999999999999988753 345 7777654
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=9.1e-66 Score=518.73 Aligned_cols=298 Identities=21% Similarity=0.252 Sum_probs=255.4
Q ss_pred CCcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHH----Hhh-cCCCCcEEEeC-
Q 015920 15 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV----GEY-MDLSSIRVVEG- 88 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~----~~a-lp~g~v~~v~g- 88 (398)
+...+++++|+|||++|+||| | .+.++++++||++||+||+|||+.+|.++.++++++ .++ +|+|++|+++|
T Consensus 128 ~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~ 205 (444)
T 4ghk_A 128 GIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETA 205 (444)
T ss_dssp SCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCC
T ss_pred CccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCC
Confidence 346789999999999999998 8 688999999999999999999999999999999997 566 99999999998
Q ss_pred ChH-hHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccc
Q 015920 89 AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACI 166 (398)
Q Consensus 89 ~~~-~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~ 166 (398)
+.+ .++.|..|+ +|+|.||||+.+|+.+++.+ +||+++|||||||+||++|||++.|++.+++++| .|+| .|+
T Consensus 206 ~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~G-~C~ 280 (444)
T 4ghk_A 206 DRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKT-HRYG-TCN 280 (444)
T ss_dssp CTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTTCCHHHHHHHCC-----------CC
T ss_pred CHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhc-CCCc-ccC
Confidence 554 566666775 99999999999999998876 6999999999999999999999999999999999 9999 999
Q ss_pred cCCeEEEeCCchHHHHHHHHHHHhhhcC---CCCCCCCcccccCCHHHHHHHHHHHHHHHhcCeeeecCccCCCCccccc
Q 015920 167 SPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 243 (398)
Q Consensus 167 a~~~v~V~~~i~~~f~~~l~~~~~~l~~---g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~P 243 (398)
+++|||||++++|+|+++|+++++++++ |||. ..++++++. . |
T Consensus 281 a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~----------------~~~~i~~a~-------~------G----- 326 (444)
T 4ghk_A 281 TMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD----------------ARAVLEAAG-------V------G----- 326 (444)
T ss_dssp CCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH----------------HHHHHHHTT-------C------C-----
T ss_pred cCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH----------------HHHHHHhcc-------c------C-----
Confidence 9999999999999999999999999887 6542 245565532 1 1
Q ss_pred eEeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCC
Q 015920 244 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH 323 (398)
Q Consensus 244 tvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~ 323 (398)
++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+++.. .+
T Consensus 327 -~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~--~~ 401 (444)
T 4ghk_A 327 -PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRF--AD 401 (444)
T ss_dssp -CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGG--CS
T ss_pred -cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCcc--CC
Confidence 12 35678999999999999999999999999999999999999999999999999999999999999997543 47
Q ss_pred CCCccccCCCCCC----CcchHHHHHhhhhceEEEEeCC
Q 015920 324 SLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSRGF 358 (398)
Q Consensus 324 ~~pfGG~~~SG~G----~~~g~~~l~~~t~~k~v~~~~~ 358 (398)
..||||.+.||+| +++|++|+++||+.|+|++...
T Consensus 402 ~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~~ 440 (444)
T 4ghk_A 402 GFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHG 440 (444)
T ss_dssp TTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEEE
T ss_pred CCCcCCcccccccCCcccCCChhHHHhhceEEEEEECCC
Confidence 8999999999988 6789999999999999988753
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=5.8e-65 Score=510.45 Aligned_cols=295 Identities=19% Similarity=0.262 Sum_probs=262.3
Q ss_pred CcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHH----hh-cCCCCcEEEeC-C
Q 015920 16 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY-MDLSSIRVVEG-A 89 (398)
Q Consensus 16 ~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~----~a-lp~g~v~~v~g-~ 89 (398)
...+++++|+|||++|+||| +.+.++++++||++||+||+|||+.+|.++.++++++. ++ +|+|++|+|+| +
T Consensus 117 ~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~~ 194 (427)
T 1o20_A 117 LRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTD 194 (427)
T ss_dssp CEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCC
T ss_pred ceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEEecCCC
Confidence 34688999999999999886 47899999999999999999999999999999999997 45 89999999998 5
Q ss_pred hH-hHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCcccc
Q 015920 90 VA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 167 (398)
Q Consensus 90 ~~-~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a 167 (398)
.+ .++.|..|+ +|+|.||||+++|+.|++.+ +||+++|||||||+||++|||+|.|++.+++++| .|+| .|++
T Consensus 195 ~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f-~n~G-~C~a 269 (427)
T 1o20_A 195 RSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDESADLKKAVPVIINAKT-QRPG-TCNA 269 (427)
T ss_dssp THHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHH-SCTT-STTS
T ss_pred hHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhc-cCCC-CCCC
Confidence 54 566777775 99999999999999999887 5999999999999999999999999999999999 9999 9999
Q ss_pred CCeEEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCeeeecCccCCCCccccceEee
Q 015920 168 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLL 247 (398)
Q Consensus 168 ~~~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Ptvl~ 247 (398)
++|||||++++|+|+++|++++++++++ +.||... .+ |+ |||
T Consensus 270 ~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------------~~gg~~~-~~-~~-Ptl-- 311 (427)
T 1o20_A 270 AEKLLVHEKIAKEFLPVIVEELRKHGVE---------------------------------VRGCEKT-RE-IV-PDV-- 311 (427)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHHTTCE---------------------------------EEECHHH-HH-HS-TTS--
T ss_pred ccEEEEehhhHHHHHHHHHHHHHHcCCe---------------------------------eecChhh-hh-hC-Ccc--
Confidence 9999999999999999999999987542 1122211 12 33 885
Q ss_pred cCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCcccCCCCCCc
Q 015920 248 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 327 (398)
Q Consensus 248 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~g~V~iN~~~~~~~~~~~pf 327 (398)
++.+|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+... ..+..||
T Consensus 312 -~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~--~~~~~pf 388 (427)
T 1o20_A 312 -VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTR--FTDGGQF 388 (427)
T ss_dssp -EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTTT
T ss_pred -cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCc--cCCCCCC
Confidence 3457899999999999999999999999999999999999999999999999999999999999998654 3577899
Q ss_pred cccCCCCCC----CcchHHHHHhhhhceEEEEeCC
Q 015920 328 GGVQESGMG----AYHGKFSFDVFSHKKAVLSRGF 358 (398)
Q Consensus 328 GG~~~SG~G----~~~g~~~l~~~t~~k~v~~~~~ 358 (398)
||.|.||+| +++|++++++||+.|+|+.+..
T Consensus 389 Gg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 389 GFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp TCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred CCcccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 999999997 4679999999999999988753
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.6e-63 Score=503.62 Aligned_cols=313 Identities=22% Similarity=0.293 Sum_probs=263.9
Q ss_pred CcceEeeecceEEEEEcCCchhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHH----hh-cCCCCcEEEeC-C
Q 015920 16 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY-MDLSSIRVVEG-A 89 (398)
Q Consensus 16 ~~~~~~~~P~GVv~vi~p~n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~----~a-lp~g~v~~v~g-~ 89 (398)
...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++..+++++. ++ +|+|++|++++ +
T Consensus 95 ~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~ 174 (452)
T 3my7_A 95 LGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPS 174 (452)
T ss_dssp --CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCC
T ss_pred CceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCC
Confidence 356889999999999999999999999999999999999999999999999998888875 56 99999999999 7
Q ss_pred hHhHHHHHhcC-CCEEEEeCCHHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCCCccccC
Q 015920 90 VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISP 168 (398)
Q Consensus 90 ~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~GQ~C~a~ 168 (398)
.+.+++|++|+ +|+|+||||+.++ +.+++++||+++|+|||||+||++|||++.|++.|++|+| +|+||.|+++
T Consensus 175 ~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~-~~~GQ~C~a~ 249 (452)
T 3my7_A 175 VELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKT-FDNGVVCASE 249 (452)
T ss_dssp HHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGG-GGGGCCTTCE
T ss_pred HHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHh-CCCCCccCCC
Confidence 78999999996 9999999999854 4567789999999999999999999999999999999999 9999999999
Q ss_pred CeEEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh-cCeeeecCccC----CCCccccc
Q 015920 169 DHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD----KNKLRIAP 243 (398)
Q Consensus 169 ~~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~~----~~~~~~~P 243 (398)
++||||+++||+|+++|+++ .||+++++++++++++++++.. ++++ .||... ..|+|++|
T Consensus 250 ~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~p 314 (452)
T 3my7_A 250 QAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPA 314 (452)
T ss_dssp EEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCT
T ss_pred cEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCC
Confidence 99999999999999999875 3899999999999999986543 3454 576542 35899999
Q ss_pred eE-------eecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCC----CCcEEEEecCCHHHHHH---HHhhccee
Q 015920 244 TL-------LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT----KPLAAYLFTNNKKLKQQ---FVETVSAG 309 (398)
Q Consensus 244 tv-------l~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~----~glsasv~t~d~~~~~~---~~~~l~~g 309 (398)
|+ +.++++++++.+ |+||||++|++|+|+||||+++|++. |||+++|||+|.+++++ +++++++|
T Consensus 315 t~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G 393 (452)
T 3my7_A 315 DTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTA 393 (452)
T ss_dssp TCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCS
T ss_pred CeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEE
Confidence 97 778999999775 89999999999999999999999985 99999999999877777 99999999
Q ss_pred eEEEcCCCcccCCCCCCccccCC-----------CCCCCcc-----hHHHHHhhhhceEEEEeC
Q 015920 310 GLVINDTAVHLAVHSLPFGGVQE-----------SGMGAYH-----GKFSFDVFSHKKAVLSRG 357 (398)
Q Consensus 310 ~V~iN~~~~~~~~~~~pfGG~~~-----------SG~G~~~-----g~~~l~~~t~~k~v~~~~ 357 (398)
+|+||++.. |||+|. -|+|+++ +.-+.+++.+.|+|..++
T Consensus 394 ~V~VN~~~~--------~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~ 449 (452)
T 3my7_A 394 RILINIPTT--------HGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRA 449 (452)
T ss_dssp EEEESCCCC------------------------------------CCCCCGGGGEEEEEEECCC
T ss_pred EEEECCCCC--------CcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEeec
Confidence 999999643 343331 1444444 445667777777776543
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=96.34 E-value=0.85 Score=44.32 Aligned_cols=258 Identities=19% Similarity=0.222 Sum_probs=141.9
Q ss_pred CCCcceEeeecceEEEEEcCCc---hhhHhhHHHHHHHHHhCCE--EEEeCCCCChHHHHHHHHHHHhhcCCCCcEEEe-
Q 015920 14 FPSSAEIVPEPFGVVLIISPWN---YPFLLSLDPVVGAIAAGNA--LVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVE- 87 (398)
Q Consensus 14 ~~~~~~~~~~P~GVv~vi~p~n---~P~~~~~~~~~~AL~aGN~--VvlKps~~~~~~~~~l~~~~~~alp~g~v~~v~- 87 (398)
.|.....++.|+--|++..|.- ||.. .+...+||-.+|.. |+.-|.+........|+.+-.. |+=.+..
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~l~----Gv~eIy~v 193 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPSS-VLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAYIS----GVDRVFRI 193 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHHH-HHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHHHH----TCCEEECC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhhH-HHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHHhc----CCcEEEEc
Confidence 3456678899999999999954 6644 55667899999987 3334443221112222221111 3223333
Q ss_pred CChHhHHHHHh---c--CCCEEEEeCCHHHHHHHHHHHhhccCchhhcc-CCCCcEEE--eCCCCHHHHHHHHHHhhhcc
Q 015920 88 GAVAETSALLD---Q--KWDKICYTGNSRVARIVMAAAAKHLTPVLLEL-GGKSPVVF--DSGINLKVACRRMIMGKWGC 159 (398)
Q Consensus 88 g~~~~~~~L~~---~--~v~~v~ftGs~~~g~~i~~~~~~~~~~v~~el-gG~~p~iV--~~daDl~~aa~~i~~~~~~~ 159 (398)
|+..+..+|.= . +||+|+=.|..-+...=...... |-..+ .|-+=+.| ++++|.+..+..++..+= +
T Consensus 194 GGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g~----VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAE-H 268 (423)
T 4gic_A 194 GGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFGQ----VGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAE-H 268 (423)
T ss_dssp CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBTT----BEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHT-T
T ss_pred CChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcCC----cCcccccccceEEEEeCCCCCHHHHHHHHHHhhc-c
Confidence 34455555542 2 49999988887665432222221 22211 24443333 456899999888887766 4
Q ss_pred CCCCccccCCeEEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCeeeecCccCCCCc
Q 015920 160 NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKL 239 (398)
Q Consensus 160 ~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~ 239 (398)
... .+.++|..+ ++|.++..++++++...-| . .+.++..++.
T Consensus 269 d~~-----a~~iLvT~s--~~la~~V~~~i~~~l~~l~----------r---~~i~~~sl~~------------------ 310 (423)
T 4gic_A 269 DED-----AQAILISPD--AAHLEAVQASIERLLPGME----------R---AEVIRTSLER------------------ 310 (423)
T ss_dssp CTT-----CEEEEEESC--HHHHHHHHHHHHHHGGGCT----------T---HHHHHHHHHH------------------
T ss_pred CCC-----CeEEEEeCc--HHHHHHHHHHHHHHHhhCc----------c---HHHHHHHHhc------------------
Confidence 332 334566655 4566666665554321101 1 1111222211
Q ss_pred cccceEeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcC-CCCcEEEEecCCHHHHHHHHhhcc-eeeEEEcCCC
Q 015920 240 RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG-TKPLAAYLFTNNKKLKQQFVETVS-AGGLVINDTA 317 (398)
Q Consensus 240 ~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~-~~glsasv~t~d~~~~~~~~~~l~-~g~V~iN~~~ 317 (398)
+ -.++.++|++|+++++|.. +-. .-|.++|.. .+..+++ +|.|++...+
T Consensus 311 ---------------------~---g~ii~v~~~~ea~~~~N~~APEH--Lel~~~~~~---~~l~~i~nAGaIFlG~~t 361 (423)
T 4gic_A 311 ---------------------R---GGMILVDDLEQAAAVANRIAPEH--LELSVESPE---VLVESIRNAGAIFMGRYT 361 (423)
T ss_dssp ---------------------H---CEEEECSSHHHHHHHHHHHCCSE--EEEESSCHH---HHGGGCCCCSEEEEC---
T ss_pred ---------------------C---ceEEEEeehHHHHHHHHhhChHH--hhhhhCCHH---HHHhhCcEeceeecCCCC
Confidence 1 1345569999999999993 333 457888875 4666665 8999997743
Q ss_pred ccc-------CCCCCCccccCCCCCCCcchHHHHHhhhhceEE
Q 015920 318 VHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353 (398)
Q Consensus 318 ~~~-------~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v 353 (398)
.-. .++-+|- +|..++.+.-+.+.|....++
T Consensus 362 p~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 362 AEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp -------------CCCC-----TTGGGTCCCCCGGGGEEEEEE
T ss_pred chhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeeeE
Confidence 211 2333443 455666666677788665444
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=92.96 E-value=7.2 Score=37.93 Aligned_cols=259 Identities=19% Similarity=0.205 Sum_probs=144.5
Q ss_pred CCcceEeeecceEEEEEcCC---chhhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCCcEEEe-CCh
Q 015920 15 PSSAEIVPEPFGVVLIISPW---NYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVE-GAV 90 (398)
Q Consensus 15 ~~~~~~~~~P~GVv~vi~p~---n~P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~alp~g~v~~v~-g~~ 90 (398)
|.....++.|+--|++..|+ -|| ++.+...+||-.+|+.=|+--+|-.... ..|+.+-. .|+=.+.. |+.
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~i~p-~iL~AA~l----~Gv~eIy~vGGA 187 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPIAD-EILYAAQL----CGVQDVFNVGGA 187 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSSCCH-HHHHHHHH----TTCCEEEECCHH
T ss_pred CcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCCCCH-HHHHHHHH----cCCCEEeecccH
Confidence 44566789999999999997 455 4455667899999987655543321111 11221111 13323333 345
Q ss_pred HhHHHHH---hc--CCCEEEEeCCHHHHHHHHHHHhhccCchhhcc-CCCCcEEE--eCCCCHHHHHHHHHHhhhccCCC
Q 015920 91 AETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLEL-GGKSPVVF--DSGINLKVACRRMIMGKWGCNNG 162 (398)
Q Consensus 91 ~~~~~L~---~~--~v~~v~ftGs~~~g~~i~~~~~~~~~~v~~el-gG~~p~iV--~~daDl~~aa~~i~~~~~~~~~G 162 (398)
....+|. .. +||+|+=.|..-+...=....... ..|-..+ .|-+=+.| ++++|.+..+..++..+= +..
T Consensus 188 QAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~-G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAE-Hd~- 264 (434)
T 1kae_A 188 QAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRL-DGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAE-HGP- 264 (434)
T ss_dssp HHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCT-TSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHT-TCT-
T ss_pred HHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhc-CccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhc-cCC-
Confidence 5555554 12 499999777776543222210001 1122211 24443333 456899999888887765 433
Q ss_pred CccccCCeEEEeCCchHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCeeeecCccCCCCcccc
Q 015920 163 QACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIA 242 (398)
Q Consensus 163 Q~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~ 242 (398)
..+.++|..+ +++.++..++++++...-| ..+..+..+
T Consensus 265 ----~a~aiLvT~s--~~la~~V~~ev~~ql~~lp-------------r~~ia~~sl----------------------- 302 (434)
T 1kae_A 265 ----DSQVILLTPA--ADMARRVAEAVERQLAELP-------------RAETARQAL----------------------- 302 (434)
T ss_dssp ----TCEEEEEESC--HHHHHHHHHHHHHHHTTCT-------------THHHHHHHH-----------------------
T ss_pred ----CCcEEEEECC--HHHHHHHHHHHHHHHHhCC-------------hHHHHHHHH-----------------------
Confidence 2344566555 4555555555554321100 011111111
Q ss_pred ceEeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc-ceeeEEEcCCCcc--
Q 015920 243 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAVH-- 319 (398)
Q Consensus 243 Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l-~~g~V~iN~~~~~-- 319 (398)
..- .++.++|++||++++|..--- -.-|.++|+. .+..++ ++|.|++...+.-
T Consensus 303 -------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG~~tpe~~ 358 (434)
T 1kae_A 303 -------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLGDWSPESA 358 (434)
T ss_dssp -------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEESTTCCHHH
T ss_pred -------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcCCCCchhh
Confidence 112 466779999999999994322 3467888875 455655 5899999874321
Q ss_pred -----cCCCCCCccccCCCCCCCcchHHHHHhhhhceEE
Q 015920 320 -----LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 353 (398)
Q Consensus 320 -----~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v 353 (398)
..++-+|-+ |..++.+.-+.+.|....++
T Consensus 359 GDY~aG~NHvLPT~-----G~AR~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 359 GDYASGTNHVLPTY-----GYTATCSSLGLADFQKRMTV 392 (434)
T ss_dssp HHHTSSSCCCCCCT-----TGGGTCCCSCGGGGEEEEEE
T ss_pred cccccCCCcccCCC-----CceeccCCCcHHhccceeeE
Confidence 235556654 45566666667788665544
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=63.79 E-value=18 Score=27.49 Aligned_cols=57 Identities=12% Similarity=0.173 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHH--HhcCeeeecCccCCCCccccceEeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcC
Q 015920 208 NSNHFARLSKLLDDD--KVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 283 (398)
Q Consensus 208 ~~~~~~~~~~~i~~a--~~~~~v~~gg~~~~~~~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~ 283 (398)
+++.+++..+..... +.+|+++..|.. |.++.+.. .+-+.|+.|+|.++|.++.|+-
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~--------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~ 74 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS--------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNSP 74 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC--------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHSH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC--------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcCH
Confidence 344444444444333 247887776543 45554321 1368899999999999999874
No 56
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=51.95 E-value=24 Score=31.19 Aligned_cols=66 Identities=8% Similarity=0.102 Sum_probs=43.5
Q ss_pred hHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCCcEEEeCChHhHHHHHhcCCCEEEEeCCHH
Q 015920 41 SLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSR 111 (398)
Q Consensus 41 ~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~alp~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~ 111 (398)
.+..++..+.+||-||++.+. +.....+..++...+|.+++++++.+.+- .-......+.++.+..
T Consensus 20 ~F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~lLP~~c~~l~~~s~~Y---~~~~~cnilgls~~v~ 85 (226)
T 3v42_A 20 SFRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTMLPVGCVRIIPYSSQY---EEAYRCNFLGLSPHVQ 85 (226)
T ss_dssp HHHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGGSCGGGCCEEEEESSC---CCTTTCSEEEECTTCC
T ss_pred HHHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHhCCHHHHhccccchhh---cchhheeeecCCCCcc
Confidence 345677888999999999764 34445567788888999999998653222 1111355555555433
No 57
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=45.69 E-value=90 Score=23.15 Aligned_cols=58 Identities=16% Similarity=0.159 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHHH--hcCeeeecCccCCCCccccceEeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcCC
Q 015920 208 NSNHFARLSKLLDDDK--VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 284 (398)
Q Consensus 208 ~~~~~~~~~~~i~~a~--~~~~v~~gg~~~~~~~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~ 284 (398)
+++.+++..+...... .||+++..| . +.++.+.. -..-+.|+.|+|.+.|.++.|+-.
T Consensus 15 d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~--------~~~lEG~~----------~~~~~viieFps~~aa~a~y~Spe 74 (94)
T 3lo3_A 15 DAEKLQQYGARVASTLAKYSGEVLVKG-S--------VEQLHGKF----------EHKAQVILEFPSREDAYNWYHSEE 74 (94)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEE-E--------CEEEESCC----------CCSEEEEEEESSHHHHHHHHHSHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEc-c--------cccccCCC----------CCCeEEEEECCCHHHHHHHHCCHH
Confidence 4444444444444332 378877766 4 34444321 124689999999999999998743
No 58
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=42.53 E-value=68 Score=25.25 Aligned_cols=28 Identities=11% Similarity=0.202 Sum_probs=21.8
Q ss_pred cccccceeeEEeeCCHHHHHHHHhcCCCC
Q 015920 258 EEIFGPLLPILTVDKIEDSFDIINSGTKP 286 (398)
Q Consensus 258 eE~fgPvl~v~~~~~~~eai~~~n~~~~g 286 (398)
+|..| =+.|+.++|+|||++++...+..
T Consensus 81 kE~lg-G~~iie~~s~deA~e~A~~~P~~ 108 (124)
T 1s7i_A 81 KEQLG-GFYLIEARDLNQALQIAAKIPPG 108 (124)
T ss_dssp SSEEE-EEEEEEESSHHHHHHHHTTCGGG
T ss_pred cccce-eEEEEEeCCHHHHHHHHHhCCcc
Confidence 45555 36778899999999999987653
No 59
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=32.65 E-value=1.4e+02 Score=24.13 Aligned_cols=62 Identities=13% Similarity=0.190 Sum_probs=39.3
Q ss_pred cCCHHHHHHHHHHHHHHH--hcCeeeecCccCCCCccccceEeecCCCCCcccccccccceeeEEeeCCHHHHHHHHhcC
Q 015920 206 IVNSNHFARLSKLLDDDK--VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 283 (398)
Q Consensus 206 l~~~~~~~~~~~~i~~a~--~~~~v~~gg~~~~~~~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~ 283 (398)
+.+++.+++..+...... .||+++..|.. +.++.+... |.. .-+.|+.|.|.+.+.++.++-
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~--------~~~lEG~~~-------e~~-~~~viieFPS~~aa~a~y~Sp 108 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF--------ELMLIGPQD-------EHW-DHVFIAEYPSVAAFVEMIRDP 108 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE--------EEEEESCTT-------CCC-SEEEEEEESCHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC--------ceeEECCCC-------CCC-CeEEEEECCCHHHHHHHHcCH
Confidence 456666666666555442 47887766543 234443221 111 368999999999999998874
No 60
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=32.34 E-value=59 Score=26.78 Aligned_cols=114 Identities=11% Similarity=0.112 Sum_probs=70.0
Q ss_pred eEEEEEcCCch-hhHhhHHHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCCcEEEeC-C-hHhHHHHHhcCCC
Q 015920 26 GVVLIISPWNY-PFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG-A-VAETSALLDQKWD 102 (398)
Q Consensus 26 GVv~vi~p~n~-P~~~~~~~~~~AL~aGN~VvlKps~~~~~~~~~l~~~~~~alp~g~v~~v~g-~-~~~~~~L~~~~v~ 102 (398)
|.|+++..-+- +-...+.+-...+.+|..++-- .-|+..|.+. ..++...++=++. + ...++.+....+|
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa~~L~e~--~Gl~v~~v~k~~eGG~p~I~d~I~~geId 84 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTGNLISRA--TGMNVNAMLSGPMGGDQQVGALISEGKID 84 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHHHHHHHH--HCCCCEEECCGGGTHHHHHHHHHHTTCCC
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHHHHHHHH--hCceeEEEEecCCCCCchHHHHHHCCCcc
Confidence 65555544433 6666666667777789987753 3344433331 1277554443322 2 2344444445799
Q ss_pred EEEEeCC-------HHHHHHHHHHHhhccCchhhccCCCCcEEEeCCCCHHHHHHHHHHhhhccCCC
Q 015920 103 KICYTGN-------SRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNG 162 (398)
Q Consensus 103 ~v~ftGs-------~~~g~~i~~~~~~~~~~v~~elgG~~p~iV~~daDl~~aa~~i~~~~~~~~~G 162 (398)
+|+||=+ ..-+..|.+.|.....|+...+ ..++.++.+.. ++..
T Consensus 85 lVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~-~~~~ 135 (152)
T 1b93_A 85 VLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPH-FNDA 135 (152)
T ss_dssp EEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGG-GGSC
T ss_pred EEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHh-cccc
Confidence 9999866 4567889999988888776543 45667777766 5543
No 61
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=23.97 E-value=42 Score=27.17 Aligned_cols=60 Identities=10% Similarity=0.092 Sum_probs=39.1
Q ss_pred HHHHhh-cCCCCcEEEeCC------hHhHHHHHhcCCCEEEEeCCH-----HHHHHHHHHHhhccCchhhcc
Q 015920 72 KLVGEY-MDLSSIRVVEGA------VAETSALLDQKWDKICYTGNS-----RVARIVMAAAAKHLTPVLLEL 131 (398)
Q Consensus 72 ~~~~~a-lp~g~v~~v~g~------~~~~~~L~~~~v~~v~ftGs~-----~~g~~i~~~~~~~~~~v~~el 131 (398)
+.+++. +|...++-++.+ +...+.+.+..+|+|++|=+. .-+..|++.|-+...|++.++
T Consensus 61 ~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 61 DWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 344454 776555544432 334444555579999998554 467889999988888877654
No 62
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=20.04 E-value=49 Score=26.33 Aligned_cols=44 Identities=18% Similarity=0.222 Sum_probs=29.0
Q ss_pred CCcEEEeCChHhH-HHHHh-cCCCEEEEeCCHHHHHHHHHHHhhcc
Q 015920 81 SSIRVVEGAVAET-SALLD-QKWDKICYTGNSRVARIVMAAAAKHL 124 (398)
Q Consensus 81 g~v~~v~g~~~~~-~~L~~-~~v~~v~ftGs~~~g~~i~~~~~~~~ 124 (398)
|.+.+++|+.+.. ...+. .++.+|++||+......+.+.+.+..
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ 98 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERG 98 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHT
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCC
Confidence 5688887865543 34444 46888889988777676666665433
Done!