Query 015923
Match_columns 398
No_of_seqs 282 out of 1042
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 04:53:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015923.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015923hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hks_A Heat-shock transcriptio 100.0 5.6E-40 1.9E-44 277.5 7.1 95 10-104 2-106 (106)
2 2ldu_A Heat shock factor prote 100.0 1.5E-39 5E-44 282.8 8.2 105 4-108 9-124 (125)
3 3hts_B Heat shock transcriptio 100.0 1.3E-33 4.4E-38 237.7 3.9 84 6-89 6-100 (102)
4 1fli_A FLI-1; transcription/DN 90.2 0.14 4.9E-06 42.5 2.5 62 12-73 5-67 (98)
5 1awc_A Protein (GA binding pro 89.4 0.14 4.8E-06 43.4 1.9 58 17-74 5-63 (110)
6 1bc8_C SAP-1, protein (SAP-1 E 88.6 0.12 4.1E-06 42.6 0.9 75 12-86 4-83 (93)
7 2ypr_A Protein FEV; transcript 88.6 0.23 7.8E-06 41.5 2.6 74 13-86 8-86 (102)
8 1yo5_C SAM pointed domain cont 87.7 0.19 6.6E-06 41.7 1.6 72 5-76 3-77 (97)
9 4avp_A ETS translocation varia 87.7 0.37 1.3E-05 40.5 3.4 76 11-86 10-90 (106)
10 1wwx_A E74-like factor 5 ESE-2 87.6 0.34 1.2E-05 40.8 3.1 79 7-86 3-88 (107)
11 2dao_A Transcription factor ET 86.5 0.64 2.2E-05 39.8 4.2 79 8-86 4-88 (118)
12 2jee_A YIIU; FTSZ, septum, coi 86.4 5 0.00017 32.1 9.1 51 133-183 25-75 (81)
13 1gvj_A C-ETS-1 protein, P54; t 85.7 0.37 1.3E-05 42.7 2.4 78 9-86 36-118 (146)
14 3jtg_A ETS-related transcripti 83.1 0.67 2.3E-05 38.7 2.8 73 14-86 6-85 (103)
15 2nny_A C-ETS-1 protein, P54; p 82.3 1.1 3.6E-05 40.7 3.9 77 10-86 62-143 (171)
16 1deb_A APC protein, adenomatou 81.5 6.8 0.00023 28.8 7.2 41 133-173 8-48 (54)
17 1hbx_G ETS-domain protein ELK- 80.4 0.74 2.5E-05 41.2 2.2 75 12-86 5-84 (157)
18 2lf8_A Transcription factor ET 77.1 0.59 2E-05 40.5 0.0 57 17-73 9-67 (128)
19 1pue_E Protein (transcription 73.3 1.3 4.5E-05 36.1 1.6 57 17-73 6-67 (89)
20 3e98_A GAF domain of unknown f 72.8 10 0.00035 35.7 8.0 76 85-193 41-116 (252)
21 1kd8_B GABH BLL, GCN4 acid bas 69.7 9.8 0.00033 26.0 5.0 26 133-158 6-31 (36)
22 2yy0_A C-MYC-binding protein; 69.6 9.1 0.00031 28.1 5.3 29 135-163 19-47 (53)
23 3hnw_A Uncharacterized protein 68.9 21 0.00072 30.9 8.4 47 133-179 80-126 (138)
24 2wt7_A Proto-oncogene protein 68.8 11 0.00038 28.2 5.9 31 132-162 27-57 (63)
25 1t2k_D Cyclic-AMP-dependent tr 68.5 10 0.00034 28.1 5.5 32 132-163 26-57 (61)
26 2yy0_A C-MYC-binding protein; 67.7 9.7 0.00033 27.9 5.1 30 143-172 20-49 (53)
27 3m48_A General control protein 67.4 7.4 0.00025 26.2 4.0 24 133-156 5-28 (33)
28 3tnu_B Keratin, type II cytosk 66.4 39 0.0014 28.4 9.5 42 133-174 34-75 (129)
29 1kd8_A GABH AIV, GCN4 acid bas 64.9 14 0.00048 25.3 5.0 27 133-159 6-32 (36)
30 3he5_B Synzip2; heterodimeric 64.6 21 0.00071 25.5 6.1 37 133-176 8-44 (52)
31 2wt7_B Transcription factor MA 64.2 14 0.00049 30.0 6.0 39 136-174 49-87 (90)
32 3c3g_A Alpha/beta peptide with 59.7 13 0.00043 25.0 4.0 24 133-156 5-28 (33)
33 3c3f_A Alpha/beta peptide with 58.6 13 0.00046 25.0 4.0 24 133-156 6-29 (34)
34 3tnu_A Keratin, type I cytoske 58.4 39 0.0013 28.5 8.1 42 133-174 36-77 (131)
35 1uo4_A General control protein 58.4 14 0.00046 25.0 4.0 24 133-156 6-29 (34)
36 2v66_B Nuclear distribution pr 58.1 78 0.0027 26.6 9.6 45 144-188 37-81 (111)
37 1a93_B MAX protein, coiled coi 57.7 16 0.00053 24.8 4.2 27 140-166 5-31 (34)
38 3q8t_A Beclin-1; autophagy, AT 57.3 59 0.002 26.3 8.6 46 132-177 8-53 (96)
39 3swf_A CGMP-gated cation chann 56.8 68 0.0023 25.2 8.4 47 132-181 4-50 (74)
40 4emc_A Monopolin complex subun 56.5 36 0.0012 31.2 7.9 54 147-200 25-78 (190)
41 3swy_A Cyclic nucleotide-gated 56.2 53 0.0018 23.5 7.2 43 133-178 3-45 (46)
42 1wt6_A Myotonin-protein kinase 56.1 42 0.0015 26.8 7.2 36 143-178 25-60 (81)
43 4dzn_A Coiled-coil peptide CC- 55.7 17 0.00058 23.8 4.0 24 133-156 7-30 (33)
44 2bni_A General control protein 55.6 16 0.00055 24.7 4.0 24 133-156 6-29 (34)
45 2oxj_A Hybrid alpha/beta pepti 55.4 16 0.00056 24.6 4.0 24 133-156 6-29 (34)
46 2hy6_A General control protein 55.3 16 0.00056 24.6 4.0 24 133-156 6-29 (34)
47 2wq1_A General control protein 54.9 17 0.00058 24.4 4.0 24 133-156 5-28 (33)
48 3oja_B Anopheles plasmodium-re 53.7 75 0.0026 32.2 10.7 45 133-177 507-551 (597)
49 1jnm_A Proto-oncogene C-JUN; B 52.5 12 0.0004 27.9 3.4 31 132-162 26-56 (62)
50 1hjb_A Ccaat/enhancer binding 52.5 21 0.00073 28.7 5.1 26 133-158 41-66 (87)
51 2jee_A YIIU; FTSZ, septum, coi 52.3 88 0.003 24.9 9.7 35 133-167 11-45 (81)
52 4dzn_A Coiled-coil peptide CC- 52.0 31 0.0011 22.5 4.8 20 136-155 3-22 (33)
53 3hnw_A Uncharacterized protein 51.2 1E+02 0.0035 26.5 9.6 43 136-178 76-118 (138)
54 3oja_B Anopheles plasmodium-re 50.7 70 0.0024 32.4 10.0 20 133-152 468-487 (597)
55 1ci6_A Transcription factor AT 49.9 29 0.001 25.9 5.3 27 133-159 28-54 (63)
56 2dgc_A Protein (GCN4); basic d 49.3 14 0.00048 27.8 3.4 27 132-158 34-60 (63)
57 4etp_A Kinesin-like protein KA 48.0 53 0.0018 32.9 8.3 49 138-186 6-54 (403)
58 3uux_B Mitochondrial division 47.8 76 0.0026 30.1 8.8 66 137-202 151-216 (242)
59 3i00_A HIP-I, huntingtin-inter 47.8 1.3E+02 0.0043 25.4 9.5 40 134-176 14-53 (120)
60 3efg_A Protein SLYX homolog; x 45.7 37 0.0013 26.6 5.4 37 140-176 26-62 (78)
61 2r2v_A GCN4 leucine zipper; co 45.6 29 0.00099 23.4 4.0 24 133-156 6-29 (34)
62 2xdj_A Uncharacterized protein 45.4 1.1E+02 0.0038 24.2 9.1 40 147-186 25-64 (83)
63 1nkp_B MAX protein, MYC proto- 42.8 27 0.00091 27.1 4.2 30 137-166 49-78 (83)
64 2w83_C C-JUN-amino-terminal ki 42.6 35 0.0012 27.0 4.7 36 132-167 34-69 (77)
65 2v71_A Nuclear distribution pr 42.1 1.5E+02 0.0052 27.0 9.6 58 144-201 90-154 (189)
66 1lwu_C Fibrinogen gamma chain; 41.7 53 0.0018 32.2 7.1 15 161-175 31-45 (323)
67 2k48_A Nucleoprotein; viral pr 41.3 1.6E+02 0.0053 24.6 9.4 33 134-166 34-66 (107)
68 1gd2_E Transcription factor PA 41.0 31 0.0011 26.6 4.2 34 132-165 33-66 (70)
69 2v66_B Nuclear distribution pr 40.6 1.6E+02 0.0053 24.7 8.8 49 133-181 40-88 (111)
70 1nkp_A C-MYC, MYC proto-oncoge 40.5 49 0.0017 26.2 5.5 32 137-168 54-85 (88)
71 1wt6_A Myotonin-protein kinase 40.3 1.4E+02 0.0048 23.8 8.9 45 130-174 26-70 (81)
72 3na7_A HP0958; flagellar bioge 39.8 96 0.0033 28.7 8.3 33 140-172 44-76 (256)
73 2v71_A Nuclear distribution pr 38.6 1.8E+02 0.0063 26.4 9.6 50 134-183 94-143 (189)
74 4e61_A Protein BIM1; EB1-like 38.1 1.4E+02 0.0046 25.0 7.9 31 147-177 9-39 (106)
75 2wt7_B Transcription factor MA 37.8 47 0.0016 26.9 5.0 37 132-168 52-88 (90)
76 3na7_A HP0958; flagellar bioge 37.4 1.5E+02 0.005 27.4 9.1 45 134-178 31-75 (256)
77 1gu4_A CAAT/enhancer binding p 37.1 27 0.00092 27.5 3.4 26 133-158 41-66 (78)
78 3ra3_B P2F; coiled coil domain 36.4 30 0.001 21.9 2.7 17 138-154 3-19 (28)
79 3a7p_A Autophagy protein 16; c 35.9 2.3E+02 0.0079 25.0 9.9 24 134-157 67-90 (152)
80 2aze_A Transcription factor DP 35.6 1.1E+02 0.0037 27.2 7.4 29 135-163 5-33 (155)
81 3ghg_A Fibrinogen alpha chain; 35.4 1E+02 0.0035 32.4 8.2 38 139-176 114-151 (562)
82 4etp_A Kinesin-like protein KA 35.3 1.1E+02 0.0038 30.5 8.4 32 134-165 9-40 (403)
83 3o0z_A RHO-associated protein 35.1 2.3E+02 0.008 25.3 9.5 47 137-183 92-138 (168)
84 1g6u_A Domain swapped dimer; d 34.5 1.2E+02 0.0041 21.3 6.7 24 151-174 22-45 (48)
85 3cvf_A Homer-3, homer protein 34.1 81 0.0028 25.0 5.7 40 135-174 20-59 (79)
86 1nlw_A MAD protein, MAX dimeri 32.9 55 0.0019 25.6 4.5 29 137-165 49-77 (80)
87 1gmj_A ATPase inhibitor; coile 32.4 1.9E+02 0.0064 23.2 7.6 37 140-176 42-78 (84)
88 1dh3_A Transcription factor CR 32.3 35 0.0012 24.9 3.1 25 132-156 26-50 (55)
89 2xu6_A MDV1 coiled coil; prote 32.3 75 0.0026 24.8 5.1 21 178-198 36-56 (72)
90 3a2a_A Voltage-gated hydrogen 32.1 1.3E+02 0.0045 22.4 6.1 32 134-165 10-41 (58)
91 3m91_A Proteasome-associated A 31.7 1.3E+02 0.0045 21.8 6.0 35 133-167 14-48 (51)
92 1lwu_C Fibrinogen gamma chain; 31.4 1.2E+02 0.0041 29.7 7.6 44 134-177 11-54 (323)
93 3cvf_A Homer-3, homer protein 31.0 2E+02 0.0067 22.7 9.7 16 135-150 13-28 (79)
94 3cue_D Transport protein parti 31.0 30 0.001 31.5 3.1 61 14-75 88-157 (193)
95 2zqm_A Prefoldin beta subunit 30.9 1.6E+02 0.0056 23.3 7.4 43 132-174 67-109 (117)
96 2dfs_A Myosin-5A; myosin-V, in 30.5 1.8E+02 0.0062 32.8 9.9 37 147-183 982-1018(1080)
97 2dfs_A Myosin-5A; myosin-V, in 30.3 2.3E+02 0.0078 32.0 10.6 44 143-186 985-1028(1080)
98 1wlq_A Geminin; coiled-coil; 2 30.2 1E+02 0.0035 24.7 5.7 16 140-155 43-58 (83)
99 3u06_A Protein claret segregat 29.9 1.6E+02 0.0054 29.6 8.5 21 133-153 8-28 (412)
100 2l5g_B Putative uncharacterize 29.7 83 0.0028 22.2 4.4 30 147-176 7-36 (42)
101 1go4_E MAD1 (mitotic arrest de 29.7 1E+02 0.0035 25.4 5.8 34 134-167 11-44 (100)
102 2akf_A Coronin-1A; coiled coil 29.6 1.2E+02 0.004 19.9 4.8 18 161-178 11-28 (32)
103 3cve_A Homer protein homolog 1 29.4 2E+02 0.0068 22.3 9.7 35 140-174 19-53 (72)
104 3a7p_A Autophagy protein 16; c 29.2 2.7E+02 0.0093 24.6 8.8 51 133-183 73-130 (152)
105 3u1c_A Tropomyosin alpha-1 cha 29.1 2.2E+02 0.0074 22.9 7.7 46 133-178 28-73 (101)
106 1l8d_A DNA double-strand break 28.7 1.2E+02 0.004 24.2 6.1 36 137-172 5-40 (112)
107 4gkw_A Spindle assembly abnorm 28.1 3E+02 0.01 24.0 8.9 41 136-176 47-87 (167)
108 3kqg_A Langerin, C-type lectin 28.1 80 0.0027 26.7 5.2 13 133-145 4-16 (182)
109 4ani_A Protein GRPE; chaperone 28.0 2.1E+02 0.0072 26.4 8.3 40 135-174 59-98 (213)
110 3t97_C Nuclear pore glycoprote 27.9 33 0.0011 26.1 2.3 25 134-158 18-42 (64)
111 4ath_A MITF, microphthalmia-as 27.3 1.7E+02 0.0059 23.3 6.5 38 137-178 41-78 (83)
112 4emc_A Monopolin complex subun 26.7 2.4E+02 0.0083 25.7 8.2 37 137-173 22-58 (190)
113 3u06_A Protein claret segregat 26.3 2E+02 0.0067 28.9 8.4 34 145-178 6-39 (412)
114 1fxk_C Protein (prefoldin); ar 26.2 1.6E+02 0.0056 24.2 6.7 42 132-173 85-126 (133)
115 4e61_A Protein BIM1; EB1-like 26.1 2.8E+02 0.0097 23.0 8.8 52 133-184 9-60 (106)
116 3uux_B Mitochondrial division 25.9 1.5E+02 0.005 28.1 6.9 56 132-187 160-215 (242)
117 3oja_A Leucine-rich immune mol 25.6 2.5E+02 0.0086 27.7 9.1 37 139-175 432-468 (487)
118 3tnu_A Keratin, type I cytoske 25.5 2.9E+02 0.01 23.0 9.1 48 132-182 49-96 (131)
119 2aze_B Transcription factor E2 25.2 1.1E+02 0.0039 25.1 5.4 31 146-176 10-40 (106)
120 3q0x_A Centriole protein; cent 25.2 2.8E+02 0.0094 25.9 8.6 43 132-174 168-210 (228)
121 2gkw_A TNF receptor-associated 24.6 1.1E+02 0.0036 27.0 5.5 31 146-176 4-34 (192)
122 1fxk_A Prefoldin; archaeal pro 24.5 1.8E+02 0.006 22.8 6.3 43 132-174 62-104 (107)
123 2aze_B Transcription factor E2 24.5 1.3E+02 0.0045 24.7 5.7 39 134-172 5-43 (106)
124 1fxk_C Protein (prefoldin); ar 24.5 1.8E+02 0.0062 23.9 6.7 17 161-177 13-29 (133)
125 1x79_B RAB GTPase binding effe 24.3 3.1E+02 0.011 22.9 9.1 47 133-182 18-64 (112)
126 3tnu_B Keratin, type II cytosk 24.2 3.1E+02 0.01 22.7 9.1 27 132-158 47-73 (129)
127 3ghg_A Fibrinogen alpha chain; 24.0 1.5E+02 0.0051 31.2 7.1 8 169-176 116-123 (562)
128 2xdj_A Uncharacterized protein 23.7 2.7E+02 0.0092 21.9 9.7 33 140-172 25-57 (83)
129 1wle_A Seryl-tRNA synthetase; 23.5 3.3E+02 0.011 28.0 9.7 70 131-200 80-161 (501)
130 1joc_A EEA1, early endosomal a 22.7 1.9E+02 0.0065 24.1 6.4 16 157-172 19-34 (125)
131 1sz7_A BET3 homolog, trafficki 22.6 58 0.002 29.9 3.4 62 14-76 85-154 (200)
132 3v86_A De novo design helix; c 22.6 84 0.0029 19.7 3.0 22 133-154 5-26 (27)
133 3cve_A Homer protein homolog 1 22.4 2.7E+02 0.0094 21.5 7.5 24 159-182 17-40 (72)
134 3u59_A Tropomyosin beta chain; 22.2 3E+02 0.01 21.9 7.7 14 163-176 44-57 (101)
135 2wvr_A Geminin; DNA replicatio 22.0 2.8E+02 0.0095 25.7 7.7 42 150-191 116-160 (209)
136 2dq0_A Seryl-tRNA synthetase; 21.9 2.3E+02 0.0077 28.8 8.0 70 131-200 41-114 (455)
137 3mq7_A Bone marrow stromal ant 21.9 1.2E+02 0.0041 25.8 4.9 35 133-167 76-110 (121)
138 1go4_E MAD1 (mitotic arrest de 21.7 1.2E+02 0.0042 25.0 4.8 26 132-157 16-41 (100)
139 1jcd_A Major outer membrane li 21.3 2.4E+02 0.0083 20.5 6.5 41 133-173 9-49 (52)
140 3s4r_A Vimentin; alpha-helix, 20.7 2E+02 0.007 22.9 5.9 45 133-177 21-70 (93)
141 1y1u_A Signal transducer and a 20.5 4.3E+02 0.015 27.9 9.9 41 129-169 13-53 (585)
142 3qne_A Seryl-tRNA synthetase, 20.4 3E+02 0.01 28.3 8.6 70 131-200 43-116 (485)
143 3ra3_A P1C; coiled coil domain 20.3 69 0.0024 20.2 2.3 19 140-158 5-23 (28)
No 1
>1hks_A Heat-shock transcription factor; transcription regulation; NMR {Drosophila melanogaster} SCOP: a.4.5.22 PDB: 1hkt_A
Probab=100.00 E-value=5.6e-40 Score=277.54 Aligned_cols=95 Identities=40% Similarity=0.827 Sum_probs=91.5
Q ss_pred CCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcccccCCCChhhHhhhhcccCccccc----------
Q 015923 10 NSLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVD---------- 79 (398)
Q Consensus 10 ~~~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~yFkh~nfsSFvRQLN~YGFrKv~---------- 79 (398)
+++|+||.|||+||+|++++++|+|+++|++|||+|+.+|+++|||+||||+||+|||||||+|||||+.
T Consensus 2 ~~~p~F~~KL~~mv~d~~~~~iI~W~~~G~sFvI~d~~~F~~~vLp~yFkh~n~~SFvRQLN~YGF~Kv~~~~~~~~~~~ 81 (106)
T 1hks_A 2 SGVPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFD 81 (106)
T ss_dssp TTCCTTHHHHHHHHSSSTTTTTSEESTTTSCEECSCCSTTTTTTSTTTTSCCCHHHHHHHHHHHCCCCSSCSSSCCSSCT
T ss_pred CCcCcHHHHHHHHhcCCCCCCEEEEeCCCCEEEECCHHHHHHHHhHHhcCCCcHHHHHHhhhcCCCeEEecccccCccCC
Confidence 4688999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred CCceeEecCCcccccccccccceec
Q 015923 80 PDRYEFANEGFLRGQKHLLKSISRR 104 (398)
Q Consensus 80 ~d~~eF~h~~F~Rg~~~LL~~IkRr 104 (398)
++.|+|+|++|+||+++||.+|+||
T Consensus 82 ~~~~ef~h~~F~Rg~~~LL~~IkRk 106 (106)
T 1hks_A 82 RDEIEFSHPFFKRNSPFLLDQIKRK 106 (106)
T ss_dssp TSTTEECCTTCCSSCTTSTTTCCCC
T ss_pred CCceEEECcCccCcCHHHHhhCcCC
Confidence 5789999999999999999999996
No 2
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=282.76 Aligned_cols=105 Identities=49% Similarity=0.891 Sum_probs=98.7
Q ss_pred CCCCCCCCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcccccCCCChhhHhhhhcccCccccc----
Q 015923 4 SSAANGNSLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVD---- 79 (398)
Q Consensus 4 s~~~~~~~~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~yFkh~nfsSFvRQLN~YGFrKv~---- 79 (398)
|.+......++||.|||+||+||++++||+|+++|++|||+|+.+|+++|||+||||+||+|||||||+|||+|+.
T Consensus 9 ~~~~~~~~~~~F~~KL~~ml~d~~~~~iI~W~~~G~sFvV~d~~~F~~~vLp~yFkh~nfsSFvRQLN~YGF~Kv~~~~~ 88 (125)
T 2ldu_A 9 SHMAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQ 88 (125)
T ss_dssp SSCCSSCCCCHHHHHHHHHHHCTTTTTTEEECTTSSEEEECCHHHHHHHHHHHHSSCCCHHHHHHHHHHTTCEEEECSCC
T ss_pred cccccCCCCCcHHHHHHHHhhCCCCCCEEEEcCCCCEEEEeCHHHHHHHHhHHhcCCCcHHHHHHHhcccCceEEeeccc
Confidence 3456778899999999999999999999999999999999999999999999999999999999999999999983
Q ss_pred -------CCceeEecCCcccccccccccceecCCCC
Q 015923 80 -------PDRYEFANEGFLRGQKHLLKSISRRKPAQ 108 (398)
Q Consensus 80 -------~d~~eF~h~~F~Rg~~~LL~~IkRrk~~~ 108 (398)
++.|+|+|++|+||+++||.+|+||++..
T Consensus 89 ~~~~~~~~~~~eF~H~~F~Rg~~~LL~~IkRk~~~~ 124 (125)
T 2ldu_A 89 GGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVTSV 124 (125)
T ss_dssp SSSSSCSSCCEEEECTTCBTTBGGGTTTSCCCTTSC
T ss_pred cccccCCCCccEEECccccCCCHHHHhhCcCCCCCC
Confidence 57899999999999999999999998753
No 3
>3hts_B Heat shock transcription factor; transcription regulation, DNA-binding protein, complex (WING helix_TURN_ helix-DNA); 1.75A {Kluyveromyces lactis} SCOP: a.4.5.22 PDB: 2hts_A 1fyk_A* 1fym_A 1fyl_A 3hsf_A 1fbu_A 1fbs_A 1fbq_A
Probab=99.97 E-value=1.3e-33 Score=237.69 Aligned_cols=84 Identities=46% Similarity=0.860 Sum_probs=77.9
Q ss_pred CCCCCCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcccccCCCChhhHhhhhcccCccccc------
Q 015923 6 AANGNSLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVD------ 79 (398)
Q Consensus 6 ~~~~~~~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~yFkh~nfsSFvRQLN~YGFrKv~------ 79 (398)
+.+.+.+|+||.|||+||+|+++++||+|+++|++|||+|+.+|+++|||+||||+||+||+||||+|||+|+.
T Consensus 6 s~~~~~~p~F~~KL~~ml~d~~~~~iI~W~~~G~sfiI~d~~~F~~~VLp~yFkh~nfsSFvRQLN~YGF~Kv~~~~~g~ 85 (102)
T 3hts_B 6 SVGSMARPAFVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQLNMYGWHKVQDVKSGS 85 (102)
T ss_dssp ----CCSCHHHHHHHHHHHCGGGTTTSEECTTSCSEEESCHHHHHHHTHHHHCSSCCHHHHHHHHHHTTEEECC------
T ss_pred CCCCCCCCcHHHHHHHHhcCCCCCCEEEEeCCCCEEEEcCHHHHHHHHHHHhcCCCcHHHHHHHhhcCCceEeeccccCc
Confidence 45668899999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred -----CCceeEecCC
Q 015923 80 -----PDRYEFANEG 89 (398)
Q Consensus 80 -----~d~~eF~h~~ 89 (398)
+++|||+|++
T Consensus 86 ~~~~~~~~wEF~n~~ 100 (102)
T 3hts_B 86 MLSNNDSRWEFENER 100 (102)
T ss_dssp ---CCSCCEEEEECC
T ss_pred ccCCCcCCeEecCCC
Confidence 7899999986
No 4
>1fli_A FLI-1; transcription/DNA; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=90.21 E-value=0.14 Score=42.52 Aligned_cols=62 Identities=18% Similarity=0.338 Sum_probs=46.6
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcc-cccCCCChhhHhhhhccc
Q 015923 12 LPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTY 73 (398)
Q Consensus 12 ~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~Y 73 (398)
.-....=|.++|+|++..++|+|...+.-|.+.|+++.++.-=. +-=+.-||.-.-|-|..|
T Consensus 5 ~~~LwqFL~~LL~d~~~~~~I~W~~~~g~Fklvd~e~VArlWG~rK~kp~MnYeklSRaLRyY 67 (98)
T 1fli_A 5 QIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYY 67 (98)
T ss_dssp SCCSHHHHHHHHHTCSSCSSEECTTSSSSCEECCHHHHHHHHHHHTCCTTCSSHHHHHHHHHH
T ss_pred ceeHHHHHHHHhcCcccCCCeEEeCCCCEEEEcCHHHHHHHHHhccCCCCcCHHHHHHHHHHH
Confidence 34455667788999999999999999999999999888774322 111345788888888776
No 5
>1awc_A Protein (GA binding protein alpha); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: a.4.5.21
Probab=89.40 E-value=0.14 Score=43.40 Aligned_cols=58 Identities=16% Similarity=0.297 Sum_probs=44.5
Q ss_pred HHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhccc-ccCCCChhhHhhhhcccC
Q 015923 17 SKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPK-YFKHSNFSSFVRQLNTYG 74 (398)
Q Consensus 17 ~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~-yFkh~nfsSFvRQLN~YG 74 (398)
.=|.++|+|++..++|+|...+.-|.+.|+++.++.-=.+ -=..-||...-|-|..|.
T Consensus 5 qFLleLL~d~~~~~~I~W~~~~geFkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY 63 (110)
T 1awc_A 5 QFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYY 63 (110)
T ss_dssp HHHHHHHTCTTTTTTSEECSSSSEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGG
T ss_pred HHHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHHccCCCCCCHHHHHHHHHHHH
Confidence 3467889999999999999999999999998887753222 112346888888887773
No 6
>1bc8_C SAP-1, protein (SAP-1 ETS domain); DNA-binding domain, winged helix-turn-helix, DNA-binding specificity, transcription/DNA complex; HET: DNA; 1.93A {Homo sapiens} SCOP: a.4.5.21 PDB: 1bc7_C* 1k6o_A 1dux_C*
Probab=88.65 E-value=0.12 Score=42.59 Aligned_cols=75 Identities=17% Similarity=0.391 Sum_probs=54.7
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcc-cccCCCChhhHhhhhcccCc----ccccCCceeEe
Q 015923 12 LPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGF----RKVDPDRYEFA 86 (398)
Q Consensus 12 ~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YGF----rKv~~d~~eF~ 86 (398)
.-....=|.++|.|++..++|+|...+.-|.+.|+++.++.-=. +-=..-||...-|-|..|-= +||...+..|.
T Consensus 4 ~i~Lw~FL~~LL~d~~~~~~I~W~~~~g~Fkl~d~~~VArlWG~rKnk~~MnYeklSRaLRyYY~~~il~Kv~g~r~vY~ 83 (93)
T 1bc8_C 4 AITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 83 (93)
T ss_dssp CCCHHHHHHHHTTCGGGTTTSEECSSSSEEECTTHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSEEECTTSTTEEE
T ss_pred cccHHHHHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcEEecCCCeEEEE
Confidence 34455668899999999999999998889999999888875322 22245589999999988742 24444555554
No 7
>2ypr_A Protein FEV; transcription; 2.64A {Homo sapiens} PDB: 1fli_A
Probab=88.58 E-value=0.23 Score=41.52 Aligned_cols=74 Identities=19% Similarity=0.328 Sum_probs=52.9
Q ss_pred CcHHHHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcc-cccCCCChhhHhhhhcccCc----ccccCCceeEe
Q 015923 13 PPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGF----RKVDPDRYEFA 86 (398)
Q Consensus 13 ~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YGF----rKv~~d~~eF~ 86 (398)
-....=|.++|+|+++.++|+|...+.-|.+.|+++.++.-=. +-=..-||.-+-|-|..|-= +||...+..|.
T Consensus 8 i~LwqFLl~LL~d~~~~~~I~W~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYY~k~ii~Kv~Gkr~vYk 86 (102)
T 2ypr_A 8 IQLWQFLLELLADRANAGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRYAYR 86 (102)
T ss_dssp CCHHHHHHHHHTCGGGTTTCEECSSTTEEECSSHHHHHHHHHHHTTCTTCCHHHHHHHHTHHHHTTSEEECSSCSSEEE
T ss_pred EeHHHHHHHHhcCCCCCCcccccCCCceEEecChHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCcEEecCCCeEEEE
Confidence 4456667899999999999999999999999999888774221 11135589999998887732 34444444443
No 8
>1yo5_C SAM pointed domain containing ETS transcription factor; protein-DNA complex, double helix, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.4.5.21
Probab=87.69 E-value=0.19 Score=41.65 Aligned_cols=72 Identities=15% Similarity=0.204 Sum_probs=50.8
Q ss_pred CCCCCCCCCcHHHHHHHhccCCC-CCCceEEcC-CCCeEEEecccchhhhhcc-cccCCCChhhHhhhhcccCcc
Q 015923 5 SAANGNSLPPFLSKIYDMVEDPS-TNDIVSWSS-SNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGFR 76 (398)
Q Consensus 5 ~~~~~~~~~~Fl~KLy~mled~~-~~~iIsWs~-~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YGFr 76 (398)
.+.++++......=|.++|+||+ ..++|+|.. ++.-|.+.|+++.++.-=. +-=..-||...-|-|..|--+
T Consensus 3 ~~~~~~~~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~~~VArlWG~rKnkp~MnYeklSRaLRyYY~~ 77 (97)
T 1yo5_C 3 LDALGSQPIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYKK 77 (97)
T ss_dssp ------CCCCHHHHHHHHHHCHHHHTTTEEEEETTTTEEEESCHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTTT
T ss_pred cCCCCCCeeEHHHHHHHHhcCcccCCCceEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhc
Confidence 34455566777888999999986 579999985 6789999999888875322 222355899999999888544
No 9
>4avp_A ETS translocation variant 1; transcription, transcriptional activation and repression, DN binding protein, E twenty-SIX, erwing sarcoma; 1.82A {Homo sapiens} PDB: 4b06_A
Probab=87.68 E-value=0.37 Score=40.50 Aligned_cols=76 Identities=21% Similarity=0.361 Sum_probs=55.2
Q ss_pred CCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcc-cccCCCChhhHhhhhcccCc----ccccCCceeE
Q 015923 11 SLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGF----RKVDPDRYEF 85 (398)
Q Consensus 11 ~~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YGF----rKv~~d~~eF 85 (398)
+.-....=|.++|+|+++.++|+|...+..|.+.|+++.++.-=. +-=+.-||..+-|-|..|-= +||...+..|
T Consensus 10 g~i~LwqFL~~LL~d~~~~~~I~W~~~~~~Fkl~dp~~VA~lWG~rKnkp~M~YeKlSRaLRyYY~kgii~Kv~G~r~vY 89 (106)
T 4avp_A 10 GSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVY 89 (106)
T ss_dssp -CCCHHHHHHHHHHCGGGTTTEEECSSTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEECTTCSSEE
T ss_pred CcEeHHHHHHHHHcCccCCCCCcccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCeEEecCCCeEEE
Confidence 344556678899999999999999999989999999888774322 11235589999999988732 3555555555
Q ss_pred e
Q 015923 86 A 86 (398)
Q Consensus 86 ~ 86 (398)
.
T Consensus 90 k 90 (106)
T 4avp_A 90 K 90 (106)
T ss_dssp E
T ss_pred E
Confidence 4
No 10
>1wwx_A E74-like factor 5 ESE-2B; DNA binding, transcriptional activation and repression, structural genomics; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=87.58 E-value=0.34 Score=40.83 Aligned_cols=79 Identities=18% Similarity=0.317 Sum_probs=55.0
Q ss_pred CCCCCCCcHHHHHHHhccCCC-CCCceEEcC-CCCeEEEecccchhhhhcc-cccCCCChhhHhhhhcccC----ccccc
Q 015923 7 ANGNSLPPFLSKIYDMVEDPS-TNDIVSWSS-SNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYG----FRKVD 79 (398)
Q Consensus 7 ~~~~~~~~Fl~KLy~mled~~-~~~iIsWs~-~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YG----FrKv~ 79 (398)
+++++......=|.++|.|++ ..++|+|.. +..-|.+.|+++.++.-=. +-=..-||...-|-|..|- .+||+
T Consensus 3 sg~~g~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY~~~ii~Kv~ 82 (107)
T 1wwx_A 3 SGSSGSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVD 82 (107)
T ss_dssp CCCCSSCCHHHHHHHHHHCTTTCCSCCEEEETTTTEEECSCHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSEECCS
T ss_pred CCCCCcEEHHHHHHHHHcCcccCCCcEEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcEEecc
Confidence 345556778888999999986 568999987 4679999999888775222 1113458899999988873 23443
Q ss_pred CCceeEe
Q 015923 80 PDRYEFA 86 (398)
Q Consensus 80 ~d~~eF~ 86 (398)
.+..|.
T Consensus 83 -~rlvY~ 88 (107)
T 1wwx_A 83 -RRLVYK 88 (107)
T ss_dssp -SSSEEE
T ss_pred -ceEEEE
Confidence 455553
No 11
>2dao_A Transcription factor ETV6; ETS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.51 E-value=0.64 Score=39.78 Aligned_cols=79 Identities=16% Similarity=0.317 Sum_probs=57.2
Q ss_pred CCCCCCcHHHHHHHhccCCCCCCceEEcC-CCCeEEEecccchhhhhcc-cccCCCChhhHhhhhccc---C-cccccCC
Q 015923 8 NGNSLPPFLSKIYDMVEDPSTNDIVSWSS-SNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTY---G-FRKVDPD 81 (398)
Q Consensus 8 ~~~~~~~Fl~KLy~mled~~~~~iIsWs~-~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~Y---G-FrKv~~d 81 (398)
+..+......=|.++|.|+++.++|+|.. ++.-|.+.|+++.++.-=. +-=+.-||.-.-|-|..| | -+||...
T Consensus 4 ~~~g~~~LwqFLleLL~d~~~~~~I~W~~~~~g~Fklvdp~~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~G~ 83 (118)
T 2dao_A 4 GSSGCRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIRKEPGQ 83 (118)
T ss_dssp CCCCCCCHHHHHHHHHHCGGGTTTEEEEEGGGTEEEESCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHTSEECCSSS
T ss_pred ccCcchHHHHHHHHHhCCcccCCceEeeCCCCCeEEEeCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCCEEeccCC
Confidence 44456667778889999999999999988 4568999999888775322 222345899999999888 3 2355555
Q ss_pred ceeEe
Q 015923 82 RYEFA 86 (398)
Q Consensus 82 ~~eF~ 86 (398)
+..|.
T Consensus 84 r~vY~ 88 (118)
T 2dao_A 84 RLLFR 88 (118)
T ss_dssp SSEEE
T ss_pred eEEEE
Confidence 55554
No 12
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=86.39 E-value=5 Score=32.15 Aligned_cols=51 Identities=25% Similarity=0.387 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMM 183 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqmm 183 (398)
|..|++.||.++..|.+|...++.....+..+.+.|.+.......|-+.|+
T Consensus 25 LqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LL 75 (81)
T 2jee_A 25 LQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALL 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455788888888888887777666666666666666655555555544444
No 13
>1gvj_A C-ETS-1 protein, P54; transcription, autoinhibition, ETS domain; 1.53A {Homo sapiens} SCOP: a.4.5.21 PDB: 1md0_A 1r36_A 1k78_B 1k79_A* 1k7a_A* 2stt_A* 2stw_A*
Probab=85.68 E-value=0.37 Score=42.69 Aligned_cols=78 Identities=21% Similarity=0.324 Sum_probs=57.5
Q ss_pred CCCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcc-cccCCCChhhHhhhhcccCcc----cccCCce
Q 015923 9 GNSLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGFR----KVDPDRY 83 (398)
Q Consensus 9 ~~~~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YGFr----Kv~~d~~ 83 (398)
+++......=|.++|+|++..++|+|...+.-|.+.|+++.++..=. +-=..-||.-.-|-|..|-=+ ||...+.
T Consensus 36 ~sg~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~Gkrl 115 (146)
T 1gvj_A 36 GSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRY 115 (146)
T ss_dssp TCCSCCHHHHHHHHHTCGGGTTTSEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHTTSEEECTTSSS
T ss_pred CCCceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEEecCCCeE
Confidence 34566777788899999999999999999999999999988875322 112244788888998887433 4444455
Q ss_pred eEe
Q 015923 84 EFA 86 (398)
Q Consensus 84 eF~ 86 (398)
.|.
T Consensus 116 vY~ 118 (146)
T 1gvj_A 116 VYR 118 (146)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 14
>3jtg_A ETS-related transcription factor ELF-3; ELF3, protein-DNA complex, type II TGF-beta receptor, activa alternative splicing, cytoplasm; HET: DNA; 2.20A {Mus musculus} SCOP: a.4.5.21
Probab=83.08 E-value=0.67 Score=38.74 Aligned_cols=73 Identities=15% Similarity=0.287 Sum_probs=49.9
Q ss_pred cHHHHHHHhccCCC-CCCceEEcCC-CCeEEEecccchhhhhcc-cccCCCChhhHhhhhcccCc----ccccCCceeEe
Q 015923 14 PFLSKIYDMVEDPS-TNDIVSWSSS-NNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGF----RKVDPDRYEFA 86 (398)
Q Consensus 14 ~Fl~KLy~mled~~-~~~iIsWs~~-G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YGF----rKv~~d~~eF~ 86 (398)
....=|.++|.|++ ..++|+|... ..-|.+.|+++.++.-=. +-=..-||..+-|-|..|-= +||...+..|.
T Consensus 6 ~LwqFL~~LL~d~~~~~~~I~W~~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYy~~~ii~Kv~G~r~vY~ 85 (103)
T 3jtg_A 6 HLWEFIRDILIHPELNEGLMKWENRHEGVFKFLRSEAVAQLWGQKKKNSNMTYEKLSRAMRYYYKREILERVDGRRLVYK 85 (103)
T ss_dssp SHHHHHHHHHTCGGGCSSCEEEEETTTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHTTSBCCCTTCTTEEE
T ss_pred cHHHHHHHHHcCcccCCCccccccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCCceEEEE
Confidence 44555778899998 5789999985 569999999888774221 11145689999999988722 34444455553
No 15
>2nny_A C-ETS-1 protein, P54; protein-DNA complex, transcription/DNA complex; 2.58A {Homo sapiens} PDB: 3ri4_A 3mfk_A 1mdm_B
Probab=82.31 E-value=1.1 Score=40.70 Aligned_cols=77 Identities=19% Similarity=0.308 Sum_probs=55.9
Q ss_pred CCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcc-cccCCCChhhHhhhhcccCcc----cccCCcee
Q 015923 10 NSLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGFR----KVDPDRYE 84 (398)
Q Consensus 10 ~~~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YGFr----Kv~~d~~e 84 (398)
++......=|.++|.|++..++|+|...+.-|.+.|+++.++..=. +-=+.-||.-.-|-|..|-=+ ||...+..
T Consensus 62 sg~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~Gkrlv 141 (171)
T 2nny_A 62 SGPIQLWQFLLELLTDKSSQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYV 141 (171)
T ss_dssp CSSCCHHHHHHHHHTCTGGGGTCEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGGTTTSEEECTTSTTE
T ss_pred CCceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEeecCCCeEE
Confidence 3455666778899999999999999999999999999988875322 112244788888999887544 44444455
Q ss_pred Ee
Q 015923 85 FA 86 (398)
Q Consensus 85 F~ 86 (398)
|.
T Consensus 142 Y~ 143 (171)
T 2nny_A 142 YR 143 (171)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 16
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=81.55 E-value=6.8 Score=28.80 Aligned_cols=41 Identities=22% Similarity=0.251 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQ 173 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq 173 (398)
|-.+|+.||+++..|.+||..--.+...++++--+|.+-|.
T Consensus 8 L~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk 48 (54)
T 1deb_A 8 LLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLK 48 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHH
Confidence 55688999999999999988888777777777766665443
No 17
>1hbx_G ETS-domain protein ELK-4; gene regulation, transcription complex; 3.15A {Homo sapiens} SCOP: a.4.5.21
Probab=80.38 E-value=0.74 Score=41.15 Aligned_cols=75 Identities=17% Similarity=0.391 Sum_probs=54.6
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcc-cccCCCChhhHhhhhcccCcc----cccCCceeEe
Q 015923 12 LPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGFR----KVDPDRYEFA 86 (398)
Q Consensus 12 ~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YGFr----Kv~~d~~eF~ 86 (398)
.-....=|.++|.|++..++|+|...+.-|.+.|+++.++..=. +-=..-||...-|-|..|-=+ ||...+..|.
T Consensus 5 ~i~LWqFLleLL~d~~~~~~I~Wt~~~geFklvdpe~VArLWG~rKnkp~MnYeKLSRALRyYY~k~Ii~KV~GqrlvYk 84 (157)
T 1hbx_G 5 AITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 84 (157)
T ss_dssp CCCHHHHTTTSSSCGGGTTTEEECSSSSCEEETTHHHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEECSSCTTEEE
T ss_pred cccHHHHHHHHhcCcccCCceEEeCCCCEEEecCcHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCCCeEEEe
Confidence 34455667889999999999999998889999999888875322 222355899999999887422 4444555554
No 18
>2lf8_A Transcription factor ETV6; auto-inhibition; NMR {Mus musculus}
Probab=77.06 E-value=0.59 Score=40.50 Aligned_cols=57 Identities=14% Similarity=0.347 Sum_probs=37.8
Q ss_pred HHHHHhccCCCCCCceEEcCCC-CeEEEecccchhhhhccc-ccCCCChhhHhhhhccc
Q 015923 17 SKIYDMVEDPSTNDIVSWSSSN-NSFIVWKVAEFSRDLLPK-YFKHSNFSSFVRQLNTY 73 (398)
Q Consensus 17 ~KLy~mled~~~~~iIsWs~~G-~sFvI~d~~~F~~~vLP~-yFkh~nfsSFvRQLN~Y 73 (398)
.=|.++|.|+++.++|+|...+ .-|.+.|+++.++.-=.+ -=+.-||.-.-|-|..|
T Consensus 9 qFLleLL~d~~~~~~I~Wt~k~~geFklvdpe~VArlWG~rKnkp~MnYeKLSRALRyY 67 (128)
T 2lf8_A 9 DYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHY 67 (128)
Confidence 4467889999999999998854 589999998776632111 11122455555555555
No 19
>1pue_E Protein (transcription factor PU.1 (TF PU.1)); complex (transcription regulating/DNA), oncogene, transforming protein, DNA- binding, activator; HET: DNA; 2.10A {Mus musculus} SCOP: a.4.5.21
Probab=73.27 E-value=1.3 Score=36.05 Aligned_cols=57 Identities=14% Similarity=0.286 Sum_probs=41.5
Q ss_pred HHHHHhccCCCCCCceEEcCC-CCeEEEe--cccchhhhhccc--ccCCCChhhHhhhhccc
Q 015923 17 SKIYDMVEDPSTNDIVSWSSS-NNSFIVW--KVAEFSRDLLPK--YFKHSNFSSFVRQLNTY 73 (398)
Q Consensus 17 ~KLy~mled~~~~~iIsWs~~-G~sFvI~--d~~~F~~~vLP~--yFkh~nfsSFvRQLN~Y 73 (398)
.=|.++|+|++..++|+|... ..-|-+. |+++.++.-=.+ .=+.-||...-|-|..|
T Consensus 6 qFL~~LL~d~~~~~~I~W~~~~~g~Fk~~~~~~e~VArlWG~rK~Nk~~MnYeKlSRaLRyY 67 (89)
T 1pue_E 6 QFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNY 67 (89)
T ss_dssp HHHHHHHHHTCCTTTEEEEETTTTEEEECTTTHHHHHHHHHHHHTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHhcCcccCCceEeecCCCcEEEEecCChHHHHHHhhcccCCCCCcCHHHHHHHHHHH
Confidence 346788999999999999874 4678775 677777743221 12355899999998887
No 20
>3e98_A GAF domain of unknown function; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.43A {Pseudomonas aeruginosa}
Probab=72.81 E-value=10 Score=35.70 Aligned_cols=76 Identities=7% Similarity=0.093 Sum_probs=33.7
Q ss_pred EecCCcccccccccccceecCCCCccCCCCcccccCCCccchhccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 85 FANEGFLRGQKHLLKSISRRKPAQVHGQQQPKLQNSSVGACVEVGKYGLEEEVEILKRDKNVLMQELVRLRQQQQATDRQ 164 (398)
Q Consensus 85 F~h~~F~Rg~~~LL~~IkRrk~~~~~~~qq~~~~~ss~~~~~E~g~~~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~q 164 (398)
=.||.|.-.+++||..++=..+..+ .... ...++.+||++...++.+
T Consensus 41 ~~~PdFf~~~~~Ll~~L~lph~~~~------------aVSL---------------------~erQ~~~LR~r~~~Le~~ 87 (252)
T 3e98_A 41 SQHPEFFVEHDELIPELRIPHQPGD------------AVSL---------------------VERQVRLLRERNIEMRHR 87 (252)
T ss_dssp --------------------------------------CHH---------------------HHHHHHHHHHHHHHHHHH
T ss_pred HhCCHHHhhCHHHHHhCCCCCCCCC------------cccH---------------------HHHHHHHHHHHHHHHHHH
Confidence 3899999999999998853222110 0011 122345677777777778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Q 015923 165 LHTVGQRVQVMEQRQQQMMSFLAKAMHSP 193 (398)
Q Consensus 165 Lq~L~~RLq~mE~rQqqmmsfLak~~q~P 193 (398)
+..|.+.-+.-|.-.+++..+..+++...
T Consensus 88 L~~Li~~A~~Ne~l~~~~~~l~l~LL~a~ 116 (252)
T 3e98_A 88 LSQLMDVARENDRLFDKTRRLVLDLLDAT 116 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88888888888887788777777777654
No 21
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=69.73 E-value=9.8 Score=26.01 Aligned_cols=26 Identities=31% Similarity=0.411 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQ 158 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqq 158 (398)
|++.|+.|...+..|..|+.+||.-.
T Consensus 6 LE~KVEeLl~~~~~Le~eV~RLk~ll 31 (36)
T 1kd8_B 6 LKAKVEELKSKLWHLKNKVARLKKKN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 78899999999999999999998654
No 22
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=69.56 E-value=9.1 Score=28.09 Aligned_cols=29 Identities=10% Similarity=0.253 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 135 EEVEILKRDKNVLMQELVRLRQQQQATDR 163 (398)
Q Consensus 135 ~Eve~LKrD~~~L~qEL~~LRQqqq~~e~ 163 (398)
.+++.||.+++.|.+++..|+++.+.+..
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~el~~ 47 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENKKLKA 47 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666766666666666655555544433
No 23
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=68.85 E-value=21 Score=30.85 Aligned_cols=47 Identities=11% Similarity=0.253 Sum_probs=21.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQ 179 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQ 179 (398)
++.+++.+.++...|..|++.++-+......++..+.+++..++.+-
T Consensus 80 L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~ 126 (138)
T 3hnw_A 80 LSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNI 126 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444444444444444444444444444433
No 24
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=68.80 E-value=11 Score=28.17 Aligned_cols=31 Identities=23% Similarity=0.429 Sum_probs=22.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATD 162 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e 162 (398)
.|+.+++.|..++..|..||..|+++...+.
T Consensus 27 ~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk 57 (63)
T 2wt7_A 27 TLQAETDQLEDEKSALQTEIANLLKEKEKLE 57 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3677888888888888888877776654443
No 25
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=68.52 E-value=10 Score=28.11 Aligned_cols=32 Identities=25% Similarity=0.275 Sum_probs=22.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDR 163 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~ 163 (398)
.|+.+++.|..++..|..|+..|+.+...+..
T Consensus 26 ~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~ 57 (61)
T 1t2k_D 26 SLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQ 57 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36777778888888888887777776654443
No 26
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=67.71 E-value=9.7 Score=27.93 Aligned_cols=30 Identities=13% Similarity=0.274 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 143 DKNVLMQELVRLRQQQQATDRQLHTVGQRV 172 (398)
Q Consensus 143 D~~~L~qEL~~LRQqqq~~e~qLq~L~~RL 172 (398)
|.+.|.+|+..||++...+..+++.+..||
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555555444444444444443
No 27
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=67.38 E-value=7.4 Score=26.16 Aligned_cols=24 Identities=38% Similarity=0.437 Sum_probs=22.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQ 156 (398)
|++.++.|-.++..|..|+.+|+.
T Consensus 5 LE~kVEeLl~~n~~Le~EV~RLk~ 28 (33)
T 3m48_A 5 LEAKVEELLSKNWNLENEVARLKK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 789999999999999999999875
No 28
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=66.39 E-value=39 Score=28.36 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~ 174 (398)
...++..|++..+.|..||..++.+...++..|..+.+|...
T Consensus 34 ~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~ 75 (129)
T 3tnu_B 34 TKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGEL 75 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 467888999999999999999888888888888887777643
No 29
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=64.91 E-value=14 Score=25.25 Aligned_cols=27 Identities=33% Similarity=0.442 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQ 159 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq 159 (398)
|+.+|+.|-.++..|..|+.+|+.-..
T Consensus 6 LE~kVEeLl~~~~~Le~EV~RL~~ll~ 32 (36)
T 1kd8_A 6 LEAEVEEIESEVWHLENEVARLEKENA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 789999999999999999999986543
No 30
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=64.65 E-value=21 Score=25.49 Aligned_cols=37 Identities=16% Similarity=0.314 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE 176 (398)
+...+.+||+|+-.|...-+. ++.-+.+|...+.++|
T Consensus 8 lrkkiarlkkdnlqlerdeqn-------lekiianlrdeiarle 44 (52)
T 3he5_B 8 LRKKIARLKKDNLQLERDEQN-------LEKIIANLRDEIARLE 44 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhHhh-------HHHHHHHHHHHHHHHH
Confidence 456788888887766555433 3344444444444433
No 31
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=64.20 E-value=14 Score=29.98 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 136 EVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (398)
Q Consensus 136 Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~ 174 (398)
+...|..++..|+.|+..|+++...+..++..+.++++.
T Consensus 49 q~~~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~ 87 (90)
T 2wt7_B 49 QKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEK 87 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566666666777777777666666666666666553
No 32
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=59.72 E-value=13 Score=25.01 Aligned_cols=24 Identities=13% Similarity=0.267 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQ 156 (398)
|++.++.|-.++..|..|+.+||.
T Consensus 5 LEdKvEeLl~~~~~Le~EV~RLk~ 28 (33)
T 3c3g_A 5 IEXKLXEIXSKXYHXENXLARIKX 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHH
Confidence 788999999999999999999875
No 33
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=58.60 E-value=13 Score=25.01 Aligned_cols=24 Identities=17% Similarity=0.253 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQ 156 (398)
|++.++.|-.++..|..|+.+||.
T Consensus 6 LEdKVEeLl~~~~~Le~EV~RLk~ 29 (34)
T 3c3f_A 6 IEXKLEXILSXLYHXENEXARIXK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHH
Confidence 788999999999999999999875
No 34
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=58.45 E-value=39 Score=28.51 Aligned_cols=42 Identities=19% Similarity=0.164 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~ 174 (398)
...++..|++..+.|..||..++.+...++..|..+.+|...
T Consensus 36 ~k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~ 77 (131)
T 3tnu_A 36 GKSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCM 77 (131)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 346677788888888888888777777777777777666543
No 35
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=58.37 E-value=14 Score=25.04 Aligned_cols=24 Identities=21% Similarity=0.339 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQ 156 (398)
|++.++.|-.++..|..|+.+|+.
T Consensus 6 LEdKVEeLl~~n~~Le~EV~RLk~ 29 (34)
T 1uo4_A 6 IEDKGEEILSKLYHIENELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 788999999999999999999875
No 36
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=58.14 E-value=78 Score=26.58 Aligned_cols=45 Identities=16% Similarity=0.231 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 144 KNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMMSFLAK 188 (398)
Q Consensus 144 ~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqmmsfLak 188 (398)
.+.|..||..||+....+...+..|.+....+|..-....+.|..
T Consensus 37 ~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD 81 (111)
T 2v66_B 37 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLED 81 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHH
Confidence 455778888888888888888888888888888776666666644
No 37
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=57.67 E-value=16 Score=24.81 Aligned_cols=27 Identities=19% Similarity=0.421 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 140 LKRDKNVLMQELVRLRQQQQATDRQLH 166 (398)
Q Consensus 140 LKrD~~~L~qEL~~LRQqqq~~e~qLq 166 (398)
+++.++...+++-.|+.|...++.|+.
T Consensus 5 mRrKn~a~qqDIddlkrQN~~Le~Qir 31 (34)
T 1a93_B 5 MRRKNDTHQQDIDDLKRQNALLEQQVR 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHhhHhhHHHHHHHHHHHHHHHH
Confidence 345555555555555555555544443
No 38
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=57.26 E-value=59 Score=26.28 Aligned_cols=46 Identities=22% Similarity=0.372 Sum_probs=39.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQ 177 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~ 177 (398)
.+..++..|+.+-..|.+||..|..+...+..+|..+..-...++.
T Consensus 8 ~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~ 53 (96)
T 3q8t_A 8 QLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQ 53 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence 4678899999999999999999999999999999888777666654
No 39
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=56.78 E-value=68 Score=25.19 Aligned_cols=47 Identities=21% Similarity=0.376 Sum_probs=35.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQ 181 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqq 181 (398)
.+++.|++|......|..-+.+|--++..++ +.|.+||..+|.+-..
T Consensus 4 dlEEKv~~LE~sld~LQTrfARLLaEy~ssQ---~KLKqRit~LE~~~~~ 50 (74)
T 3swf_A 4 GLEEKVTRMESSVDLLQTRFARILAEYESMQ---QKLKQRLTKVEKFLKP 50 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcc
Confidence 5788899999888888888888877765554 5567788888875443
No 40
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=56.51 E-value=36 Score=31.18 Aligned_cols=54 Identities=7% Similarity=0.246 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHh
Q 015923 147 LMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMMSFLAKAMHSPSFLSQLV 200 (398)
Q Consensus 147 L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqmmsfLak~~q~P~fl~qlv 200 (398)
|..|+..|.++...-+.++..|.++|+..+..-...-.-+++...+-++..-|+
T Consensus 25 L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~~~~~~~~~~~e~i~i~~DL~ 78 (190)
T 4emc_A 25 LVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKTQTSQQAENSEVIKDLY 78 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHhhhHHHHHH
Confidence 333334444444444444444444444444333333333444444444444444
No 41
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=56.17 E-value=53 Score=23.53 Aligned_cols=43 Identities=33% Similarity=0.423 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQR 178 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~r 178 (398)
+++.+++|....+.|..-+.+|--++...+ +.|.+|+..+|.+
T Consensus 3 lEekv~~Le~~ld~LqTr~ArLlae~~ssq---~KlKqRit~lE~~ 45 (46)
T 3swy_A 3 LEEKVEQLGSSLDTLQTRFARLLAEYNATQ---MKMKQRLSQLESQ 45 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhc
Confidence 677888888888888888888876665554 4567788887753
No 42
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=56.07 E-value=42 Score=26.79 Aligned_cols=36 Identities=22% Similarity=0.311 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 143 DKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQR 178 (398)
Q Consensus 143 D~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~r 178 (398)
-++.+..||.+.|--+..++.+|+.-..|.+.++..
T Consensus 25 AKQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e 60 (81)
T 1wt6_A 25 TRQSLSREMEAIRTDNQNFASQLREAEARNRDLEAH 60 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356677777777777777777776666665554433
No 43
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=55.67 E-value=17 Score=23.82 Aligned_cols=24 Identities=33% Similarity=0.534 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQ 156 (398)
+..|+..||++...|.-|+..|+|
T Consensus 7 lkqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 7 LKQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344444455555555545444443
No 44
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=55.59 E-value=16 Score=24.68 Aligned_cols=24 Identities=21% Similarity=0.475 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQ 156 (398)
|++.++.|-.++..|..|+.+|+.
T Consensus 6 LEdKvEeLl~~~~~L~~EV~RLk~ 29 (34)
T 2bni_A 6 IEDKLEEILSKGHHICNELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccHHHHHHHHHHHH
Confidence 788999999999999999999875
No 45
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=55.36 E-value=16 Score=24.62 Aligned_cols=24 Identities=33% Similarity=0.420 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQ 156 (398)
|++.++.|-.+++.|..|+.+||.
T Consensus 6 LE~kVEeLl~~n~~Le~eV~rLk~ 29 (34)
T 2oxj_A 6 LEXKVXELLXKNXHLEXEVXRLKX 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHH
Confidence 788999999999999999999875
No 46
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=55.25 E-value=16 Score=24.61 Aligned_cols=24 Identities=29% Similarity=0.376 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQ 156 (398)
|++.++.|-..+..|..|+.+|+.
T Consensus 6 LEdkVEeLl~~~~~Le~eV~RL~~ 29 (34)
T 2hy6_A 6 LADAVEELASANYHLANAVARLAK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 788999999999999999999875
No 47
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=54.89 E-value=17 Score=24.39 Aligned_cols=24 Identities=21% Similarity=0.196 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQ 156 (398)
|++.|+.|-..+..|..|+.+|+.
T Consensus 5 LEdKVEell~~~~~le~EV~Rl~~ 28 (33)
T 2wq1_A 5 LEDKIEENTSKIYHNTNEIARNTK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 788999999999999999999875
No 48
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=53.68 E-value=75 Score=32.22 Aligned_cols=45 Identities=18% Similarity=0.245 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQ 177 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~ 177 (398)
+++++..++.+.+.+..++.+++++.+....+++.+.+.+..+|+
T Consensus 507 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 551 (597)
T 3oja_B 507 LNKVFTHLKERQAFKLRETQARRTEADAKQKETEDLEQENIALEK 551 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcchhhHHhhhHHHHH
Confidence 444455555555556666666665555555555544444444443
No 49
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=52.53 E-value=12 Score=27.85 Aligned_cols=31 Identities=32% Similarity=0.339 Sum_probs=23.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATD 162 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e 162 (398)
.|+.+++.|..++..|..++..|+.+...+.
T Consensus 26 ~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk 56 (62)
T 1jnm_A 26 RLEEKVKTLKAQNSELASTANMLREQVAQLK 56 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888888888888888888777655443
No 50
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=52.46 E-value=21 Score=28.72 Aligned_cols=26 Identities=15% Similarity=0.236 Sum_probs=13.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQ 158 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqq 158 (398)
+..+++.|..++..|..+|..|+++.
T Consensus 41 ~~~r~~~Le~EN~~Lr~~v~~L~~E~ 66 (87)
T 1hjb_A 41 TQHKVLELTAENERLQKKVEQLSREL 66 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555555444443
No 51
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=52.26 E-value=88 Score=24.92 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHT 167 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~ 167 (398)
|+..|..+=.....|..|+..|+++...+..+.+.
T Consensus 11 LE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e 45 (81)
T 2jee_A 11 LEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQN 45 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555666666666666555555555
No 52
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=51.97 E-value=31 Score=22.54 Aligned_cols=20 Identities=30% Similarity=0.529 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 015923 136 EVEILKRDKNVLMQELVRLR 155 (398)
Q Consensus 136 Eve~LKrD~~~L~qEL~~LR 155 (398)
|+..||++...|..|+..|+
T Consensus 3 eiaalkqeiaalkkeiaalk 22 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAALK 22 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555554443
No 53
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=51.21 E-value=1e+02 Score=26.46 Aligned_cols=43 Identities=12% Similarity=0.173 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 136 EVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQR 178 (398)
Q Consensus 136 Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~r 178 (398)
+++.|..+.+.+..|+..|+.+....+-++..+.+.+..+..+
T Consensus 76 ~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~ 118 (138)
T 3hnw_A 76 MADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSE 118 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444444444444444333333
No 54
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=50.72 E-value=70 Score=32.41 Aligned_cols=20 Identities=20% Similarity=0.014 Sum_probs=9.2
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELV 152 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~ 152 (398)
+++++.+..+..+.+.+++.
T Consensus 468 l~~~~~~~~~~l~~~~~~i~ 487 (597)
T 3oja_B 468 LTNEQIQQEQLLQGLHAEID 487 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 44444444444444444443
No 55
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=49.94 E-value=29 Score=25.92 Aligned_cols=27 Identities=22% Similarity=0.288 Sum_probs=16.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQ 159 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq 159 (398)
++.+++.|+.++..|..++..|+.+..
T Consensus 28 le~~~~~L~~~N~~L~~~i~~L~~E~~ 54 (63)
T 1ci6_A 28 LTGECKELEKKNEALKERADSLAKEIQ 54 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556666666666666666666555443
No 56
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=49.32 E-value=14 Score=27.82 Aligned_cols=27 Identities=33% Similarity=0.401 Sum_probs=20.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQ 158 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqq 158 (398)
.|+.+++.|+.++..|..|+..|+++.
T Consensus 34 ~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 34 QLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 477888888888888888888887654
No 57
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=47.98 E-value=53 Score=32.89 Aligned_cols=49 Identities=14% Similarity=0.220 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 138 EILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMMSFL 186 (398)
Q Consensus 138 e~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqmmsfL 186 (398)
+.|+.+...|.+++..+.++.+.++.++..+.+++...|..-+++-+-+
T Consensus 6 ~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~ 54 (403)
T 4etp_A 6 AALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNEL 54 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444555555556666666665555444444333
No 58
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=47.81 E-value=76 Score=30.08 Aligned_cols=66 Identities=18% Similarity=0.261 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHhhh
Q 015923 137 VEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMMSFLAKAMHSPSFLSQLVQQ 202 (398)
Q Consensus 137 ve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqmmsfLak~~q~P~fl~qlvq~ 202 (398)
+..|++..+.+..++.-|-=+...+..+|..+-.+++.+...++.++.-||.+=++-.||..-+..
T Consensus 151 l~~Lkk~~~~i~~~LelL~IRK~ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~~ 216 (242)
T 3uux_B 151 PSALKSFSQTLVNSLEFLNIQKNSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLKQ 216 (242)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 356888888888877666666667888999999999999999999999999999988888776644
No 59
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=47.75 E-value=1.3e+02 Score=25.45 Aligned_cols=40 Identities=20% Similarity=0.243 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (398)
Q Consensus 134 e~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE 176 (398)
+..|+.|+++.+.|..|+.+++.+.+..- ..|..||..+|
T Consensus 14 D~~Ie~Lkreie~lk~ele~l~~E~q~~v---~ql~~~i~~Le 53 (120)
T 3i00_A 14 DHLIERLYREISGLKAQLENMKTESQRVV---LQLKGHVSELE 53 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 56789999999999999999987765544 44455555555
No 60
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=45.71 E-value=37 Score=26.60 Aligned_cols=37 Identities=8% Similarity=0.070 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 140 LKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (398)
Q Consensus 140 LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE 176 (398)
.....+.|-..|.+..++...+..++..|.+|+..++
T Consensus 26 qE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~ 62 (78)
T 3efg_A 26 QEQALTELSEALADARLTGARNAELIRHLLEDLGKVR 62 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3334444444445444444444455555555444433
No 61
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=45.57 E-value=29 Score=23.45 Aligned_cols=24 Identities=17% Similarity=0.234 Sum_probs=21.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQ 156 (398)
+++.++.|-.++..|..|+.+|+.
T Consensus 6 ledKvEel~~~~~~l~nEv~Rl~~ 29 (34)
T 2r2v_A 6 VADKLEEVASKLYHNANELARVAK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 678899999999999999999875
No 62
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=45.40 E-value=1.1e+02 Score=24.17 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 147 LMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMMSFL 186 (398)
Q Consensus 147 L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqmmsfL 186 (398)
|.+.|..|+++...+..++..+...|..+.++|+.+..-|
T Consensus 25 Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dL 64 (83)
T 2xdj_A 25 LQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQI 64 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444455555555555555666666665444
No 63
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=42.80 E-value=27 Score=27.12 Aligned_cols=30 Identities=17% Similarity=0.413 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 137 VEILKRDKNVLMQELVRLRQQQQATDRQLH 166 (398)
Q Consensus 137 ve~LKrD~~~L~qEL~~LRQqqq~~e~qLq 166 (398)
|..|+.+.+.|..|+..|+++...++.+|.
T Consensus 49 I~~L~~~~~~l~~e~~~L~~~~~~L~~~l~ 78 (83)
T 1nkp_B 49 IQYMRRKNHTHQQDIDDLKRQNALLEQQVR 78 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555666666666555554444443
No 64
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=42.62 E-value=35 Score=27.01 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=18.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHT 167 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~ 167 (398)
.|-.+|+.|-.++.+|..|+..+++-...++..+..
T Consensus 34 DLI~rvdELt~E~e~l~~El~s~~~~~~r~~~ri~e 69 (77)
T 2w83_C 34 DLIAKVDELTCEKDVLQGELEAVKQAKLKLEEKNRE 69 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666666666666666555544433333333
No 65
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=42.08 E-value=1.5e+02 Score=26.97 Aligned_cols=58 Identities=17% Similarity=0.277 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHhcChhHHHHHhh
Q 015923 144 KNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMMSFL-------AKAMHSPSFLSQLVQ 201 (398)
Q Consensus 144 ~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqmmsfL-------ak~~q~P~fl~qlvq 201 (398)
.+.|..|+..|+.....+..++..|.+....+|.......+.| -+++-...||..=+.
T Consensus 90 ~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~aiEr~alLE~El~ 154 (189)
T 2v71_A 90 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELD 154 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555555555555555555555444443 334444455544443
No 66
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=41.67 E-value=53 Score=32.22 Aligned_cols=15 Identities=13% Similarity=-0.020 Sum_probs=5.6
Q ss_pred HHHHHHHHHHHHHHH
Q 015923 161 TDRQLHTVGQRVQVM 175 (398)
Q Consensus 161 ~e~qLq~L~~RLq~m 175 (398)
++.+|..+..+|+.+
T Consensus 31 L~~~l~~~~~~i~~l 45 (323)
T 1lwu_C 31 LSEMWRVNQQFVTRL 45 (323)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 67
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=41.31 E-value=1.6e+02 Score=24.64 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLH 166 (398)
Q Consensus 134 e~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq 166 (398)
-+.+++|+.+.....++|+..||+.+..+.++.
T Consensus 34 M~~ieeLQ~Ei~~~E~QL~iArQKLkdAe~~~E 66 (107)
T 2k48_A 34 MSTLQELQENITAHEQQLVTARQKLKDAEKAVE 66 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 578999999999999999999998887776553
No 68
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=41.00 E-value=31 Score=26.64 Aligned_cols=34 Identities=29% Similarity=0.302 Sum_probs=20.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQL 165 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qL 165 (398)
.|+.+|..|...+..|..|...|+++...+..++
T Consensus 33 ~LE~~v~~le~~~~~l~~en~~Lr~~i~~L~~El 66 (70)
T 1gd2_E 33 ALETQVVTLKELHSSTTLENDQLRQKVRQLEEEL 66 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566666666666666666666666555544444
No 69
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=40.63 E-value=1.6e+02 Score=24.71 Aligned_cols=49 Identities=22% Similarity=0.249 Sum_probs=27.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQ 181 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqq 181 (398)
|..++..|+..+..|..-|..|-|....++..-.....-|..+|.+-.+
T Consensus 40 Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~ 88 (111)
T 2v66_B 40 LEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQ 88 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHH
Confidence 4555666666666666666666665555555555555555555555444
No 70
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=40.54 E-value=49 Score=26.24 Aligned_cols=32 Identities=16% Similarity=0.300 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 137 VEILKRDKNVLMQELVRLRQQQQATDRQLHTV 168 (398)
Q Consensus 137 ve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L 168 (398)
|..|+.+...|..|+..|+++++.+..+|+.|
T Consensus 54 I~~L~~~~~~l~~~~~~L~~~n~~L~~rl~~L 85 (88)
T 1nkp_A 54 ILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55666677777777777776666665555544
No 71
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=40.25 E-value=1.4e+02 Score=23.80 Aligned_cols=45 Identities=13% Similarity=0.357 Sum_probs=35.2
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 130 KYGLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (398)
Q Consensus 130 ~~~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~ 174 (398)
+..+.+|+...|.++..+..+|.....+.+.+..+|..+..++..
T Consensus 26 KQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~ee 70 (81)
T 1wt6_A 26 RQSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMEL 70 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677888888888888888888888888888887777776655
No 72
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=39.75 E-value=96 Score=28.71 Aligned_cols=33 Identities=15% Similarity=0.226 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 140 LKRDKNVLMQELVRLRQQQQATDRQLHTVGQRV 172 (398)
Q Consensus 140 LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RL 172 (398)
++.....+..++..++.++...+..+..+..|+
T Consensus 44 l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri 76 (256)
T 3na7_A 44 KNKAILNLEEEKLALKLQVSKNEQTLQDTNAKI 76 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333333333333333
No 73
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=38.64 E-value=1.8e+02 Score=26.40 Aligned_cols=50 Identities=20% Similarity=0.233 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMM 183 (398)
Q Consensus 134 e~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqmm 183 (398)
..++..|+..+..|..-|..|-|.+..++........-|..+|.+-.+.|
T Consensus 94 q~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~ai 143 (189)
T 2v71_A 94 EDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQAI 143 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 33334444444444444444444444444444333333444444333333
No 74
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=38.07 E-value=1.4e+02 Score=24.97 Aligned_cols=31 Identities=13% Similarity=0.239 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 147 LMQELVRLRQQQQATDRQLHTVGQRVQVMEQ 177 (398)
Q Consensus 147 L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~ 177 (398)
|.+||...+++...+..++..|...++.+|+
T Consensus 9 l~~eL~~~~~ei~~L~~ei~eLk~~ve~lEk 39 (106)
T 4e61_A 9 IQAELTKSQETIGSLNEEIEQYKGTVSTLEI 39 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444455555555555554
No 75
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=37.78 E-value=47 Score=26.92 Aligned_cols=37 Identities=27% Similarity=0.300 Sum_probs=23.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTV 168 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L 168 (398)
.|+.++..|..+.+.|.+|+.++.++...+...+++|
T Consensus 52 ~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 52 HLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4666666666666666666666666666665555543
No 76
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=37.42 E-value=1.5e+02 Score=27.44 Aligned_cols=45 Identities=16% Similarity=0.225 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQR 178 (398)
Q Consensus 134 e~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~r 178 (398)
..++..|..+...|...+..++.+...++.++..+...+.....+
T Consensus 31 p~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~r 75 (256)
T 3na7_A 31 RKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAK 75 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444444444444444444444433
No 77
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=37.06 E-value=27 Score=27.53 Aligned_cols=26 Identities=15% Similarity=0.236 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQ 158 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqq 158 (398)
+..+++.|..++..|..+|..|+++.
T Consensus 41 ~~~r~~~L~~eN~~L~~~v~~L~~E~ 66 (78)
T 1gu4_A 41 TQHKVLELTAENERLQKKVEQLSREL 66 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555555554443
No 78
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=36.40 E-value=30 Score=21.92 Aligned_cols=17 Identities=35% Similarity=0.411 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 015923 138 EILKRDKNVLMQELVRL 154 (398)
Q Consensus 138 e~LKrD~~~L~qEL~~L 154 (398)
.+||..+..|.||+..|
T Consensus 3 rrlkqknarlkqeiaal 19 (28)
T 3ra3_B 3 RRLKQKNARLKQEIAAL 19 (28)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred hHHHHhhhHHHHHHHHH
Confidence 35555555555555443
No 79
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=35.86 E-value=2.3e+02 Score=25.01 Aligned_cols=24 Identities=25% Similarity=0.376 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 134 EEEVEILKRDKNVLMQELVRLRQQ 157 (398)
Q Consensus 134 e~Eve~LKrD~~~L~qEL~~LRQq 157 (398)
...+..|+.+...|..++..+...
T Consensus 67 ~~~I~~L~~El~~l~~ki~dLeee 90 (152)
T 3a7p_A 67 LNTLAILQKELKSKEQEIRRLKEV 90 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666666666655544
No 80
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=35.61 E-value=1.1e+02 Score=27.16 Aligned_cols=29 Identities=14% Similarity=0.150 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 135 EEVEILKRDKNVLMQELVRLRQQQQATDR 163 (398)
Q Consensus 135 ~Eve~LKrD~~~L~qEL~~LRQqqq~~e~ 163 (398)
.+++.|+.++..++..|.+-+++.+.+..
T Consensus 5 qe~~~Le~Ek~~~~~rI~~K~~~LqeL~~ 33 (155)
T 2aze_A 5 QECQNLEVERQRRLERIKQKQSQLQELIL 33 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777766666555554444443333
No 81
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=35.44 E-value=1e+02 Score=32.37 Aligned_cols=38 Identities=16% Similarity=0.181 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 139 ILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (398)
Q Consensus 139 ~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE 176 (398)
.|++.++.|..+|....++.+.++..|.++...++++|
T Consensus 114 ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLE 151 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLE 151 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666666666666666666666666666666666
No 82
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=35.33 E-value=1.1e+02 Score=30.47 Aligned_cols=32 Identities=16% Similarity=0.218 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQL 165 (398)
Q Consensus 134 e~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qL 165 (398)
+++++.|+++...|.+++..++.+.+.+..++
T Consensus 9 ~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 40 (403)
T 4etp_A 9 KEKIAALKEKIAALKEKIKDTELGMKELNEIL 40 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444444333
No 83
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=35.13 E-value=2.3e+02 Score=25.33 Aligned_cols=47 Identities=11% Similarity=0.187 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 137 VEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMM 183 (398)
Q Consensus 137 ve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqmm 183 (398)
+..|......|..||.+++............|.+||..+|.....|.
T Consensus 92 ~~elq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lEKe~a~~e 138 (168)
T 3o0z_A 92 IGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKNNLE 138 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 33445556666667777777776677777777777777776555553
No 84
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=34.51 E-value=1.2e+02 Score=21.29 Aligned_cols=24 Identities=25% Similarity=0.430 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 151 LVRLRQQQQATDRQLHTVGQRVQV 174 (398)
Q Consensus 151 L~~LRQqqq~~e~qLq~L~~RLq~ 174 (398)
+..|.-+.+.++..+..+..+|+.
T Consensus 22 laaleselqalekklaalksklqa 45 (48)
T 1g6u_A 22 LAALESELQALEKKLAALKSKLQA 45 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333344444444454444443
No 85
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=34.09 E-value=81 Score=24.96 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 135 EEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (398)
Q Consensus 135 ~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~ 174 (398)
.+...|+.....|.+.|..-+.++.....++..+.+.|.+
T Consensus 20 ~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~ 59 (79)
T 3cvf_A 20 TRNAELEHQLRAMERSLEEARAERERARAEVGRAAQLLDV 59 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3334444444444455555555555555666555555544
No 86
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=32.94 E-value=55 Score=25.58 Aligned_cols=29 Identities=21% Similarity=0.393 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 137 VEILKRDKNVLMQELVRLRQQQQATDRQL 165 (398)
Q Consensus 137 ve~LKrD~~~L~qEL~~LRQqqq~~e~qL 165 (398)
|..|+.+...|..|...|+.++..+..+|
T Consensus 49 I~~L~~~~~~l~~e~~~L~~e~~~L~~~L 77 (80)
T 1nlw_A 49 IKKLEDSDRKAVHQIDQLQREQRHLKRQL 77 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666666666666666655544444
No 87
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=32.38 E-value=1.9e+02 Score=23.20 Aligned_cols=37 Identities=11% Similarity=0.153 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 140 LKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (398)
Q Consensus 140 LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE 176 (398)
|+.=+..|..||...+++...++.+|.....+|..++
T Consensus 42 L~~LKkkl~~el~~h~~ei~~le~~i~rhk~~i~~l~ 78 (84)
T 1gmj_A 42 LAALKKHKENEISHHAKEIERLQKEIERHKQSIKKLK 78 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3333333444555555555555555554444444443
No 88
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=32.32 E-value=35 Score=24.92 Aligned_cols=25 Identities=32% Similarity=0.599 Sum_probs=16.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQ 156 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQ 156 (398)
.|+.++..|..++..|..++..|++
T Consensus 26 ~LE~~v~~L~~eN~~L~~~~~~L~~ 50 (55)
T 1dh3_A 26 SLENRVAVLENQNKTLIEELKALKD 50 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566666677777666666666554
No 89
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=32.27 E-value=75 Score=24.84 Aligned_cols=21 Identities=10% Similarity=0.316 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHhcChhHHHH
Q 015923 178 RQQQMMSFLAKAMHSPSFLSQ 198 (398)
Q Consensus 178 rQqqmmsfLak~~q~P~fl~q 198 (398)
..+-++.-||.+=|+-.||..
T Consensus 36 mR~ivldRlA~lEqdE~~LE~ 56 (72)
T 2xu6_A 36 KKEKLLGKIANIEQNQLMLED 56 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHH
Confidence 333333344444444444433
No 90
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=32.07 E-value=1.3e+02 Score=22.38 Aligned_cols=32 Identities=16% Similarity=0.209 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQL 165 (398)
Q Consensus 134 e~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qL 165 (398)
+.++.+||.-+..|...+..|..+-...+.++
T Consensus 10 e~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEi 41 (58)
T 3a2a_A 10 ERQLLRLKQMNVQLAAKIQHLEFSCSEKEQEI 41 (58)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777777777777755544444333
No 91
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=31.69 E-value=1.3e+02 Score=21.83 Aligned_cols=35 Identities=29% Similarity=0.362 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHT 167 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~ 167 (398)
+..++..|...|..|..-|...|++...+..+|..
T Consensus 14 l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele~ 48 (51)
T 3m91_A 14 LEARIDSLAARNSKLMETLKEARQQLLALREEVDR 48 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555666666666666665555555443
No 92
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=31.38 E-value=1.2e+02 Score=29.75 Aligned_cols=44 Identities=18% Similarity=0.169 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQ 177 (398)
Q Consensus 134 e~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~ 177 (398)
.+++.+|.........++..|+.+....+.+|+.|.+.|..++.
T Consensus 11 ~~~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i~~l~~~i~~l~~ 54 (323)
T 1lwu_C 11 LEEVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLVDIRQ 54 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444333333344444444444444444444444444443
No 93
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=30.96 E-value=2e+02 Score=22.73 Aligned_cols=16 Identities=19% Similarity=0.260 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHHHH
Q 015923 135 EEVEILKRDKNVLMQE 150 (398)
Q Consensus 135 ~Eve~LKrD~~~L~qE 150 (398)
..+..+...+..|...
T Consensus 13 ~klq~~E~rN~~Le~~ 28 (79)
T 3cvf_A 13 QKVQDLETRNAELEHQ 28 (79)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHH
Confidence 3344444444433333
No 94
>3cue_D Transport protein particle 22 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae}
Probab=30.95 E-value=30 Score=31.50 Aligned_cols=61 Identities=16% Similarity=0.297 Sum_probs=46.5
Q ss_pred cHH-HHHHHhccCCCCCCceEEcCCCCeEEE-ecccchhhhh-ccccc-CCCChhhHhhh-----hcccCc
Q 015923 14 PFL-SKIYDMVEDPSTNDIVSWSSSNNSFIV-WKVAEFSRDL-LPKYF-KHSNFSSFVRQ-----LNTYGF 75 (398)
Q Consensus 14 ~Fl-~KLy~mled~~~~~iIsWs~~G~sFvI-~d~~~F~~~v-LP~yF-kh~nfsSFvRQ-----LN~YGF 75 (398)
.|| +.+|.++=.-.. +...|+++++.|+| .|..-+..-| ||+.. ..-+|+.|+.= |.+-||
T Consensus 88 ~fI~k~~Wk~lfgk~~-d~L~~t~~~~~y~L~~d~nPl~~fv~lP~~~~~~l~y~~f~cGIIrGaL~~~g~ 157 (193)
T 3cue_D 88 EVLSKCAFKIFLNITP-NITNWSHNKDTFSLILDENPLADFVELPMDAMKSLWYSNILCGVLKGSLEMVQL 157 (193)
T ss_dssp HHHHHHHHHHHSSCCC-CCBCCCTTSCCCBCCBSCCGGGSSCCCCTTTTTSCCTTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCC-ccceecCCCCEEEEEECCchhhhheeCcHhHHhCcchhhhHHHHHHHHHHhCCC
Confidence 567 448888877544 46789999999999 7777665544 68777 67799999753 888999
No 95
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=30.91 E-value=1.6e+02 Score=23.33 Aligned_cols=43 Identities=21% Similarity=0.280 Sum_probs=29.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~ 174 (398)
..++=++.|....+.+..++.+|..+...++.++..+...|+.
T Consensus 67 ~~~ea~~~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l~~ 109 (117)
T 2zqm_A 67 TKDKAVAELKEKIETLEVRLNALERQEKKLNEKLKELTAQIQS 109 (117)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666777777777777777777777666666666655544
No 96
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=30.54 E-value=1.8e+02 Score=32.83 Aligned_cols=37 Identities=11% Similarity=0.253 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 147 LMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMM 183 (398)
Q Consensus 147 L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqmm 183 (398)
+..++..|.++...++.+++.+......+|++.+++.
T Consensus 982 ~~~~v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~ 1018 (1080)
T 2dfs_A 982 ATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYK 1018 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444444444444443
No 97
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=30.30 E-value=2.3e+02 Score=32.05 Aligned_cols=44 Identities=20% Similarity=0.308 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 143 DKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMMSFL 186 (398)
Q Consensus 143 D~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqmmsfL 186 (398)
....|..|+..++++.+.+..+...++++++.++..-+..++-|
T Consensus 985 ~v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~~L~~kv~~L 1028 (1080)
T 2dfs_A 985 RVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSEL 1028 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555554444443333333333
No 98
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=30.20 E-value=1e+02 Score=24.67 Aligned_cols=16 Identities=31% Similarity=0.466 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHHHH
Q 015923 140 LKRDKNVLMQELVRLR 155 (398)
Q Consensus 140 LKrD~~~L~qEL~~LR 155 (398)
|..+.+.+..|+.+|+
T Consensus 43 Lh~~ie~~~eEi~~Lk 58 (83)
T 1wlq_A 43 LHKEIEQKDSEIARLR 58 (83)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 99
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=29.92 E-value=1.6e+02 Score=29.56 Aligned_cols=21 Identities=24% Similarity=0.254 Sum_probs=9.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVR 153 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~ 153 (398)
|++|+..|+...+.|.+++..
T Consensus 8 l~~el~~~~~~~~~l~~~~~~ 28 (412)
T 3u06_A 8 LSTEVVHLRQRTEELLRCNEQ 28 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444444333
No 100
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=29.73 E-value=83 Score=22.17 Aligned_cols=30 Identities=20% Similarity=0.417 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 147 LMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (398)
Q Consensus 147 L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE 176 (398)
|.|.+.++-.+...++.++..+..|+..+|
T Consensus 7 l~qkI~kVdrEI~Kte~kI~~lqkKlkeLe 36 (42)
T 2l5g_B 7 LIQNMDRVDREITMVEQQISKLKKKQQQLE 36 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444455555555555555555544
No 101
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=29.69 E-value=1e+02 Score=25.39 Aligned_cols=34 Identities=26% Similarity=0.354 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHT 167 (398)
Q Consensus 134 e~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~ 167 (398)
.+++..|+++...|..|-.+|+++...++.+|..
T Consensus 11 ~e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~ 44 (100)
T 1go4_E 11 REEADTLRLKVEELEGERSRLEEEKRMLEAQLER 44 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578888888888888888888888777777643
No 102
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=29.60 E-value=1.2e+02 Score=19.91 Aligned_cols=18 Identities=11% Similarity=0.322 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 015923 161 TDRQLHTVGQRVQVMEQR 178 (398)
Q Consensus 161 ~e~qLq~L~~RLq~mE~r 178 (398)
+..-+|.|.+|+.++|..
T Consensus 11 l~~ivq~lq~r~drle~t 28 (32)
T 2akf_A 11 LNAIVQKLQERLDRLEET 28 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344556666777777653
No 103
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=29.41 E-value=2e+02 Score=22.32 Aligned_cols=35 Identities=20% Similarity=0.185 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 140 LKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (398)
Q Consensus 140 LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~ 174 (398)
|+.....|.+.|..-+.++.....++..+.+.|.+
T Consensus 19 Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld~ 53 (72)
T 3cve_A 19 LEGQLSEMEQRLEKSQSEQDAFRSNLKTLLEILDG 53 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33333344444444444444455555555554443
No 104
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=29.19 E-value=2.7e+02 Score=24.55 Aligned_cols=51 Identities=14% Similarity=0.216 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQE-------LVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMM 183 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qE-------L~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqmm 183 (398)
|..++..|+.....|..| +..++.++..+.-++..+.+++..++..-+.++
T Consensus 73 L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV 130 (152)
T 3a7p_A 73 LQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLV 130 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444433 334444444444555555555555555444433
No 105
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=29.11 E-value=2.2e+02 Score=22.93 Aligned_cols=46 Identities=17% Similarity=0.247 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQR 178 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~r 178 (398)
++.++..+......+..||..|..+.+.++..+.....+|.....+
T Consensus 28 ~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~k 73 (101)
T 3u1c_A 28 AEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDS 73 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 106
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=28.70 E-value=1.2e+02 Score=24.25 Aligned_cols=36 Identities=14% Similarity=0.219 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 137 VEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRV 172 (398)
Q Consensus 137 ve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RL 172 (398)
++.++.+...+..++..|+..+..+..++..+...+
T Consensus 5 ~~~~~~~~~~~~~~l~~L~~~~~~l~~~i~~l~~~l 40 (112)
T 1l8d_A 5 LEELETKKTTIEEERNEITQRIGELKNKIGDLKTAI 40 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444455555544444444444444333
No 107
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=28.11 E-value=3e+02 Score=23.97 Aligned_cols=41 Identities=20% Similarity=0.294 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 136 EVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (398)
Q Consensus 136 Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE 176 (398)
.++.|++.+..-..||.+||-+...++..++....-|.+-.
T Consensus 47 KVDQlqKRn~~HQKEi~~Lrae~~~~QRn~~K~~~~Lkrn~ 87 (167)
T 4gkw_A 47 KVDQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQLLKRNS 87 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhh
Confidence 46667777777777777777776666666655555554433
No 108
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=28.07 E-value=80 Score=26.74 Aligned_cols=13 Identities=31% Similarity=0.437 Sum_probs=2.4
Q ss_pred hHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKN 145 (398)
Q Consensus 133 Le~Eve~LKrD~~ 145 (398)
|..+++.||+|.+
T Consensus 4 l~~~~~~l~~~~~ 16 (182)
T 3kqg_A 4 LNAQIPELKSDLE 16 (182)
T ss_dssp ---------CHHH
T ss_pred hhhhHHHHHHHHH
Confidence 4566666776655
No 109
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=27.99 E-value=2.1e+02 Score=26.39 Aligned_cols=40 Identities=15% Similarity=0.160 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 135 EEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (398)
Q Consensus 135 ~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~ 174 (398)
++++.|+.+...|..|+..++.++..+...+.++..|...
T Consensus 59 ~e~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~r 98 (213)
T 4ani_A 59 EELAAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQ 98 (213)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777778888888888888888788888888887754
No 110
>3t97_C Nuclear pore glycoprotein P62; nucleoporin, coiled-coil, nuclear pore complex, central TRAN channel, alpha helical proteins, triple helix; 2.80A {Rattus norvegicus}
Probab=27.86 E-value=33 Score=26.14 Aligned_cols=25 Identities=44% Similarity=0.381 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 134 EEEVEILKRDKNVLMQELVRLRQQQ 158 (398)
Q Consensus 134 e~Eve~LKrD~~~L~qEL~~LRQqq 158 (398)
..++.+.+++.+.|-++|.-+..||
T Consensus 18 ~~~v~~~e~~Q~~ldq~Ld~Ie~QQ 42 (64)
T 3t97_C 18 HREVEKVKLDQKRLDQELDFILSQQ 42 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444443333
No 111
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=27.32 E-value=1.7e+02 Score=23.31 Aligned_cols=38 Identities=18% Similarity=0.187 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 137 VEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQR 178 (398)
Q Consensus 137 ve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~r 178 (398)
|..|+.+++.+..|..+++ .++..-..|.-|+|.+|..
T Consensus 41 I~~Lq~e~~r~~e~e~r~k----~le~~n~~l~~riqELE~q 78 (83)
T 4ath_A 41 IRKLQREQQRAKDLENRQK----KLEHANRHLLLRVQELEMQ 78 (83)
T ss_dssp HHHHHHTHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH----HhhhhhHHHHHHHHHHHHH
Confidence 4456666666655544433 3455556666677766643
No 112
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=26.70 E-value=2.4e+02 Score=25.73 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 137 VEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQ 173 (398)
Q Consensus 137 ve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq 173 (398)
|..|..++..|.+++....++...++.+++.+.+.+.
T Consensus 22 V~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~ 58 (190)
T 4emc_A 22 VANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVK 58 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 4555566666665555555555555555555555543
No 113
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=26.27 E-value=2e+02 Score=28.88 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 145 NVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQR 178 (398)
Q Consensus 145 ~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~r 178 (398)
..|..||..++++...++.+++.+...+..++++
T Consensus 6 ~~l~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~ 39 (412)
T 3u06_A 6 AALSTEVVHLRQRTEELLRCNEQQAAELETCKEQ 39 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555555555555555554443
No 114
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=26.17 E-value=1.6e+02 Score=24.18 Aligned_cols=42 Identities=19% Similarity=0.333 Sum_probs=23.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQ 173 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq 173 (398)
.+++=++-|++..+.|...+..+.++...+..++..+.+.|+
T Consensus 85 ~~~eA~~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~~l~ 126 (133)
T 1fxk_C 85 NFEDAMESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAE 126 (133)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455556666666666666655555555555545544444443
No 115
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=26.09 E-value=2.8e+02 Score=23.01 Aligned_cols=52 Identities=8% Similarity=0.067 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMMS 184 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqmms 184 (398)
+..++...+.+...|.+|+..|+.....++.+=.---.+|+..|-=+|....
T Consensus 9 l~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkERDFYF~KLRdIEiLcQe~~~ 60 (106)
T 4e61_A 9 IQAELTKSQETIGSLNEEIEQYKGTVSTLEIEREFYFNKLRDIEILVHTTQD 60 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566666666666666666655555554433333456666655555443
No 116
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=25.90 E-value=1.5e+02 Score=28.12 Aligned_cols=56 Identities=18% Similarity=0.221 Sum_probs=43.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMMSFLA 187 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqmmsfLa 187 (398)
.+..+++.|--.++....||..+--+.+.+..-=+.+.+||..+|+..-.|-.-|.
T Consensus 160 ~i~~~LelL~IRK~ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~ 215 (242)
T 3uux_B 160 TLVNSLEFLNIQKNSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLK 215 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 46677788888888888888888888877777777788888888887777666653
No 117
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=25.64 E-value=2.5e+02 Score=27.69 Aligned_cols=37 Identities=8% Similarity=0.039 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 139 ILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVM 175 (398)
Q Consensus 139 ~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~m 175 (398)
+++++.+....|+.+++++...++..+..+...+..+
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (487)
T 3oja_A 432 NAIRDWDMYQHKETQLAEENARLKKLNGEADLALASA 468 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhc
Confidence 3334444444444444444444444444444333333
No 118
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=25.45 E-value=2.9e+02 Score=22.96 Aligned_cols=48 Identities=21% Similarity=0.198 Sum_probs=28.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQM 182 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqm 182 (398)
.|..+++.++..+..|...|..+.+... .++..+...|..+|..-+++
T Consensus 49 ~L~~el~~l~~~~~sLE~~l~e~e~~~~---~~l~~~q~~i~~lE~eL~~~ 96 (131)
T 3tnu_A 49 NLEIELQSQLSMKASLENSLEETKGRYC---MQLAQIQEMIGSVEEQLAQL 96 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 4777888888888888888777766543 33344444444444433333
No 119
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=25.23 E-value=1.1e+02 Score=25.06 Aligned_cols=31 Identities=19% Similarity=0.377 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 146 VLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (398)
Q Consensus 146 ~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE 176 (398)
.|..|+..|.++-+.++..+..+.+.|+.+-
T Consensus 10 ~Lk~El~~L~~~E~~LD~~i~~~~~~l~~lt 40 (106)
T 2aze_B 10 GLTQDLRQLQESEQQLDHLMNICTTQLRLLS 40 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444555555555555555555555554443
No 120
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=25.15 E-value=2.8e+02 Score=25.92 Aligned_cols=43 Identities=21% Similarity=0.171 Sum_probs=31.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~ 174 (398)
-+...+..+|.+...|.++|.+.+.+...+..+|....+.+..
T Consensus 168 yLa~R~~~lK~kl~~l~~~L~~~~~e~~s~~~~~~~~~~~~~~ 210 (228)
T 3q0x_A 168 FLAFRLSEVKGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQ 210 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777888888888888888888777777777666555433
No 121
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=24.58 E-value=1.1e+02 Score=26.98 Aligned_cols=31 Identities=32% Similarity=0.385 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 146 VLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (398)
Q Consensus 146 ~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE 176 (398)
.|.+.+.++..+....+.+|..|.+|++.+|
T Consensus 4 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 34 (192)
T 2gkw_A 4 LLESQLSRHDQMLSVHDIRLADMDLRFQVLE 34 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444455554444445555666666655555
No 122
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=24.52 E-value=1.8e+02 Score=22.82 Aligned_cols=43 Identities=16% Similarity=0.195 Sum_probs=30.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQV 174 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~ 174 (398)
..++-+..|....+.+..++..|..+...++.+|..+...|+.
T Consensus 62 ~~~e~~~~L~~~~e~i~~~i~~le~~~~~~~~~l~~lk~~l~~ 104 (107)
T 1fxk_A 62 AKDELTEELQEKLETLQLREKTIERQEERVMKKLQEMQVNIQE 104 (107)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555666777778888888888877777777777777666543
No 123
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=24.52 E-value=1.3e+02 Score=24.68 Aligned_cols=39 Identities=18% Similarity=0.172 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRV 172 (398)
Q Consensus 134 e~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RL 172 (398)
..++..||.|.+.|.++=..|-+....+..+|.+|.+-.
T Consensus 5 ~~~~~~Lk~El~~L~~~E~~LD~~i~~~~~~l~~lted~ 43 (106)
T 2aze_B 5 GGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSEDT 43 (106)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 345667777777777777777777777777777777653
No 124
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=24.50 E-value=1.8e+02 Score=23.88 Aligned_cols=17 Identities=12% Similarity=0.274 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 015923 161 TDRQLHTVGQRVQVMEQ 177 (398)
Q Consensus 161 ~e~qLq~L~~RLq~mE~ 177 (398)
++.+++.+.++++.++.
T Consensus 13 l~~~~~~l~~~~~~l~~ 29 (133)
T 1fxk_C 13 YQSQVELIQQQMEAVRA 29 (133)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444444444433
No 125
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=24.33 E-value=3.1e+02 Score=22.91 Aligned_cols=47 Identities=19% Similarity=0.277 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQM 182 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE~rQqqm 182 (398)
+.++++++..++.-|... +.++-.....+++.|..+++..|+--+-|
T Consensus 18 l~~qL~k~~~~r~~Le~~---w~~k~E~~k~qV~~L~~~~q~sE~~L~~L 64 (112)
T 1x79_B 18 ANDQLEKTMKDKQELEDF---IKQSSEDSSHQISALVLRAQASEILLEEL 64 (112)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555554 34455566788888888888877544433
No 126
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=24.15 E-value=3.1e+02 Score=22.74 Aligned_cols=27 Identities=19% Similarity=0.273 Sum_probs=19.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQQ 158 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQqq 158 (398)
.|..+++.++..+..|...|..+.+.+
T Consensus 47 ~L~~el~~l~~~~~~LE~~l~e~e~~~ 73 (129)
T 3tnu_B 47 RLRAEIDNVKKQCANLQNAIADAEQRG 73 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 467777778888888877777766654
No 127
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=23.95 E-value=1.5e+02 Score=31.19 Aligned_cols=8 Identities=25% Similarity=0.671 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q 015923 169 GQRVQVME 176 (398)
Q Consensus 169 ~~RLq~mE 176 (398)
..|++.++
T Consensus 116 RRrIqyLK 123 (562)
T 3ghg_A 116 RSRIEVLK 123 (562)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 128
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=23.68 E-value=2.7e+02 Score=21.92 Aligned_cols=33 Identities=27% Similarity=0.265 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 140 LKRDKNVLMQELVRLRQQQQATDRQLHTVGQRV 172 (398)
Q Consensus 140 LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RL 172 (398)
|....+.|.+||.+||-+.+...++|..|.+|.
T Consensus 25 Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQ 57 (83)
T 2xdj_A 25 LQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQ 57 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 344444555555555555555555555554443
No 129
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=23.48 E-value=3.3e+02 Score=28.00 Aligned_cols=70 Identities=16% Similarity=0.217 Sum_probs=45.3
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcChhHHHH
Q 015923 131 YGLEEEVEILKRDKNVLMQELVRLRQQQ-----------QATDRQLHTVGQRVQVMEQRQQQMMSFLAK-AMHSPSFLSQ 198 (398)
Q Consensus 131 ~~Le~Eve~LKrD~~~L~qEL~~LRQqq-----------q~~e~qLq~L~~RLq~mE~rQqqmmsfLak-~~q~P~fl~q 198 (398)
..+..+++.|+.+++.+-.+|..++... ..+..++..|.++|..+|.....+-.-|.. ++.=|..+.-
T Consensus 80 r~~~~~~~~l~~~rn~~sk~i~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~l~~~~~~~~~~l~~~l~~iPN~~~~ 159 (501)
T 1wle_A 80 RQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPKEAQLEEQFYLRALRLPNQTHP 159 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 3466778888888888888887765432 355667777788888887766666555533 3343444443
Q ss_pred Hh
Q 015923 199 LV 200 (398)
Q Consensus 199 lv 200 (398)
-+
T Consensus 160 ~v 161 (501)
T 1wle_A 160 DV 161 (501)
T ss_dssp TC
T ss_pred CC
Confidence 33
No 130
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=22.66 E-value=1.9e+02 Score=24.08 Aligned_cols=16 Identities=0% Similarity=0.181 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHHHH
Q 015923 157 QQQATDRQLHTVGQRV 172 (398)
Q Consensus 157 qqq~~e~qLq~L~~RL 172 (398)
+...++.+++.+..+|
T Consensus 19 e~~~l~~~~~el~~~l 34 (125)
T 1joc_A 19 EIEKLQTKVLELQRKL 34 (125)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 131
>1sz7_A BET3 homolog, trafficking protein particle complex subunit 3; alpha-beta plait, trapp complex, palmitoylated, transport PR; HET: PLM; 1.55A {Homo sapiens} PDB: 2cfh_A* 2pwn_A* 3kxc_A* 1wc8_A* 2j3w_D* 2j3r_A* 2j3t_A* 1wc9_A* 2c0j_A*
Probab=22.61 E-value=58 Score=29.86 Aligned_cols=62 Identities=15% Similarity=0.271 Sum_probs=45.0
Q ss_pred cHH-HHHHHhccCCCCCCceEEcCCCCeEEE-ecccchhhhh-cccccCCCChhhHhhh-----hcccCcc
Q 015923 14 PFL-SKIYDMVEDPSTNDIVSWSSSNNSFIV-WKVAEFSRDL-LPKYFKHSNFSSFVRQ-----LNTYGFR 76 (398)
Q Consensus 14 ~Fl-~KLy~mled~~~~~iIsWs~~G~sFvI-~d~~~F~~~v-LP~yFkh~nfsSFvRQ-----LN~YGFr 76 (398)
.|| +.+|.++=.-. .+...|+++++.|+| .|..-+..-| ||+-.+.-+|+.|+.= |.+-||.
T Consensus 85 ~fI~k~~Wk~lFgk~-ad~L~~t~~~~~Y~L~~D~nPL~~fvslP~~~~~l~y~~f~cGIIrGaL~~lg~~ 154 (200)
T 1sz7_A 85 DVIAKVAFKMYLGIT-PSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSNLLCGVLRGALEMVQMA 154 (200)
T ss_dssp HHHHHTHHHHHHSCC-CEEECCCTTSCEEEEEESSCTTCTTCCCCGGGTTCCTTTHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHHHHhCCC-CccceecCCCCEEEEEECCcHHHHhccCCccccCCchhhhHHHHHHHHHHhCCCE
Confidence 455 34666665543 357889999999999 7776655533 6876677899999753 8889998
No 132
>3v86_A De novo design helix; computational design of A protein crystal, helical coil, DE designed helix, de novo protein; 2.91A {Synthetic}
Probab=22.58 E-value=84 Score=19.69 Aligned_cols=22 Identities=36% Similarity=0.454 Sum_probs=14.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRL 154 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~L 154 (398)
+..|+..||-+-..|..|+..|
T Consensus 5 lkdevgelkgevralkdevkdl 26 (27)
T 3v86_A 5 LKDEVGELKGEVRALKDEVKDL 26 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhHHHHHHHHHhcc
Confidence 5566777777766666666554
No 133
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=22.39 E-value=2.7e+02 Score=21.53 Aligned_cols=24 Identities=21% Similarity=0.334 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 159 QATDRQLHTVGQRVQVMEQRQQQM 182 (398)
Q Consensus 159 q~~e~qLq~L~~RLq~mE~rQqqm 182 (398)
+.++.+++.+.++|.....+|.++
T Consensus 17 ~~Le~~v~~le~~Le~s~~~q~~~ 40 (72)
T 3cve_A 17 KDLEGQLSEMEQRLEKSQSEQDAF 40 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444443
No 134
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=22.19 E-value=3e+02 Score=21.92 Aligned_cols=14 Identities=7% Similarity=0.207 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHHH
Q 015923 163 RQLHTVGQRVQVME 176 (398)
Q Consensus 163 ~qLq~L~~RLq~mE 176 (398)
..+..|..+++.+|
T Consensus 44 ~ei~sL~kKiq~lE 57 (101)
T 3u59_A 44 EEQQGLQKKLKGTE 57 (101)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333433333
No 135
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=22.01 E-value=2.8e+02 Score=25.66 Aligned_cols=42 Identities=12% Similarity=0.237 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhc
Q 015923 150 ELVRLRQQQQATDRQLHTVGQ---RVQVMEQRQQQMMSFLAKAMH 191 (398)
Q Consensus 150 EL~~LRQqqq~~e~qLq~L~~---RLq~mE~rQqqmmsfLak~~q 191 (398)
|-..|.++....+.++..|.+ +|+.+=..=|.|.+.|.+++.
T Consensus 116 EN~~Lh~~ie~l~eEi~~LkeEn~eLkeLae~~q~la~vi~~l~~ 160 (209)
T 2wvr_A 116 ENEKLHKEIEQKDNEIARLKKENKELAEVAEHVQYMAELIERLNG 160 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 333444444334444433333 233333445556666666555
No 136
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=21.93 E-value=2.3e+02 Score=28.77 Aligned_cols=70 Identities=13% Similarity=0.180 Sum_probs=42.4
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcChhHHHHHh
Q 015923 131 YGLEEEVEILKRDKNVLMQELVRLRQQ---QQATDRQLHTVGQRVQVMEQRQQQMMSFLAKA-MHSPSFLSQLV 200 (398)
Q Consensus 131 ~~Le~Eve~LKrD~~~L~qEL~~LRQq---qq~~e~qLq~L~~RLq~mE~rQqqmmsfLak~-~q~P~fl~qlv 200 (398)
..+..+++.|+.+++.+-.++..++.. ...+..++..|.+++..+|.+...+-.-|..+ +.=|..++--|
T Consensus 41 r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipN~~~~~v 114 (455)
T 2dq0_A 41 RTKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEVEELKKKIDYYLWRLPNITHPSV 114 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccC
Confidence 346677888888888888888765432 23455666677777777776666655554443 33344443333
No 137
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=21.89 E-value=1.2e+02 Score=25.79 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHT 167 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~ 167 (398)
|..||..|++..+....|+.+||.+.+.+...+.+
T Consensus 76 LqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~~r~~~ 110 (121)
T 3mq7_A 76 LEGEITTLNHKLQDASAEVERLRRENQVLSVRIAD 110 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhHhhh
No 138
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=21.70 E-value=1.2e+02 Score=24.96 Aligned_cols=26 Identities=31% Similarity=0.295 Sum_probs=16.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQQ 157 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQq 157 (398)
.+..+|+.|.+++..|.+++..|.-+
T Consensus 16 ~lr~ei~~Le~E~~rLr~~~~~LE~~ 41 (100)
T 1go4_E 16 TLRLKVEELEGERSRLEEEKRMLEAQ 41 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777777777777776555444
No 139
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=21.33 E-value=2.4e+02 Score=20.49 Aligned_cols=41 Identities=12% Similarity=0.145 Sum_probs=19.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQ 173 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq 173 (398)
|..+|..|..+-..|..++..++-..+....+-.--.+||.
T Consensus 9 Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~RAN~RlD 49 (52)
T 1jcd_A 9 ASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRAD 49 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34445555555555555555555444444444444444443
No 140
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=20.68 E-value=2e+02 Score=22.89 Aligned_cols=45 Identities=20% Similarity=0.463 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQA-----TDRQLHTVGQRVQVMEQ 177 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~-----~e~qLq~L~~RLq~mE~ 177 (398)
+-+.|..|..+|..|..++..++++... .+.+|..|...|..+..
T Consensus 21 yIdKVR~LEqqN~~Le~~i~~l~~~~~~~~~~~ye~~i~~Lr~~i~~~~~ 70 (93)
T 3s4r_A 21 LIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTN 70 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 4567778888888888888777664322 34555555555554443
No 141
>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding, SH2 domain, transcription REGU signaling protein; 3.21A {Mus musculus}
Probab=20.50 E-value=4.3e+02 Score=27.91 Aligned_cols=41 Identities=20% Similarity=0.086 Sum_probs=31.7
Q ss_pred cccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 129 GKYGLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVG 169 (398)
Q Consensus 129 g~~~Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~ 169 (398)
....++..++.|+..-+.+.+|+..|.+.|..+.-+.+.+.
T Consensus 13 ~~~eI~~~v~~l~~~~q~~e~~~k~Le~~Qe~F~~~y~~~~ 53 (585)
T 1y1u_A 13 KHLQINQRFEELRLITQDTENELKKLQQTQEYFIIQYQESL 53 (585)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 34568888999998888899999999888887666655444
No 142
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=20.42 E-value=3e+02 Score=28.31 Aligned_cols=70 Identities=7% Similarity=0.062 Sum_probs=42.8
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcChhHHHHHh
Q 015923 131 YGLEEEVEILKRDKNVLMQELVRLRQQ---QQATDRQLHTVGQRVQVMEQRQQQMMSFLAK-AMHSPSFLSQLV 200 (398)
Q Consensus 131 ~~Le~Eve~LKrD~~~L~qEL~~LRQq---qq~~e~qLq~L~~RLq~mE~rQqqmmsfLak-~~q~P~fl~qlv 200 (398)
..+..+++.|+.+++.+-.++-.++.. -..+..++..|.+++..+|.+...+-.-|.. ++.=|..+.--|
T Consensus 43 r~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~le~~~~~~~~~~~~~l~~iPN~~~~~v 116 (485)
T 3qne_A 43 VKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESV 116 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccC
Confidence 346677888888888888887666542 2345556677777777777766666555533 333344444333
No 143
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=20.33 E-value=69 Score=20.24 Aligned_cols=19 Identities=26% Similarity=0.440 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 015923 140 LKRDKNVLMQELVRLRQQQ 158 (398)
Q Consensus 140 LKrD~~~L~qEL~~LRQqq 158 (398)
|.-++..|.|.+..|+|+.
T Consensus 5 lefendaleqkiaalkqki 23 (28)
T 3ra3_A 5 LEFENDALEQKIAALKQKI 23 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHH
Confidence 3344555555555555443
Done!