Query 015923
Match_columns 398
No_of_seqs 282 out of 1042
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 04:53:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015923.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015923hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hksa_ a.4.5.22 (A:) Heat-sho 100.0 1.8E-36 1.3E-40 253.8 7.1 95 10-104 2-106 (106)
2 d2htsa_ a.4.5.22 (A:) Heat-sho 100.0 1.1E-30 8.2E-35 214.1 4.0 78 12-89 2-90 (92)
3 d1pp7u_ a.4.5.44 (U:) 39 kda i 94.7 0.0052 3.8E-07 50.4 1.9 75 12-94 27-110 (114)
4 d1flia_ a.4.5.21 (A:) Fli-1 {H 91.5 0.043 3.2E-06 43.6 2.5 62 12-73 5-67 (98)
5 d1awca_ a.4.5.21 (A:) GA bindi 91.4 0.034 2.5E-06 45.1 1.9 56 18-73 6-62 (110)
6 d1duxc_ a.4.5.21 (C:) Elk-1 {H 89.4 0.037 2.7E-06 43.1 0.4 55 19-73 7-63 (86)
7 d1hbxg_ a.4.5.21 (G:) Serum re 89.4 0.07 5.1E-06 45.6 2.2 69 18-86 9-82 (155)
8 d1gvja_ a.4.5.21 (A:) ETS-1 tr 88.6 0.057 4.2E-06 45.5 1.0 74 13-86 40-118 (142)
9 d1puee_ a.4.5.21 (E:) Transcri 82.5 0.11 8.2E-06 40.4 -0.2 56 18-73 7-67 (88)
10 d1wwxa1 a.4.5.21 (A:8-101) E74 78.7 0.32 2.3E-05 38.1 1.3 56 18-73 7-65 (94)
11 d1yo5c1 a.4.5.21 (C:247-334) S 75.5 0.28 2E-05 38.1 0.1 59 18-76 8-69 (88)
12 d1seta1 a.2.7.1 (A:1-110) Sery 42.2 54 0.0039 24.5 8.2 55 132-186 39-94 (110)
13 d2azea1 e.63.1.1 (A:199-346) T 37.1 48 0.0035 27.2 7.4 17 136-152 3-19 (148)
14 d1nkpa_ a.38.1.1 (A:) Myc prot 35.7 31 0.0022 25.1 5.5 30 136-165 53-82 (88)
15 d1ivsa1 a.2.7.3 (A:797-862) Va 29.8 72 0.0053 21.8 6.5 25 133-157 2-26 (66)
16 d1nkpb_ a.38.1.1 (B:) Max prot 28.9 29 0.0021 25.0 4.2 29 137-165 49-77 (83)
17 d1fxkc_ a.2.5.1 (C:) Prefoldin 27.9 69 0.005 24.4 6.7 35 133-167 86-120 (133)
18 d1fxkc_ a.2.5.1 (C:) Prefoldin 25.3 81 0.0059 23.9 6.7 16 139-154 5-20 (133)
19 d2azeb1 e.63.1.2 (B:201-301) T 24.1 65 0.0047 24.4 5.7 31 146-176 5-35 (101)
20 d1zyma1 a.60.10.1 (A:22-144) E 22.6 1.5E+02 0.011 22.3 8.8 56 133-202 15-71 (123)
21 d1lrza1 a.2.7.4 (A:245-309) Me 22.0 1.2E+02 0.0089 21.1 8.3 45 137-181 5-55 (65)
22 d2azeb1 e.63.1.2 (B:201-301) T 20.5 97 0.007 23.4 6.0 36 137-172 3-38 (101)
23 d1nlwa_ a.38.1.1 (A:) Mad prot 20.2 78 0.0057 22.2 5.1 22 137-158 49-70 (79)
No 1
>d1hksa_ a.4.5.22 (A:) Heat-shock transcription factor {Drosophila melanogaster [TaxId: 7227]}
Probab=100.00 E-value=1.8e-36 Score=253.84 Aligned_cols=95 Identities=40% Similarity=0.827 Sum_probs=90.5
Q ss_pred CCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcccccCCCChhhHhhhhcccCccccc----------
Q 015923 10 NSLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVD---------- 79 (398)
Q Consensus 10 ~~~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~yFkh~nfsSFvRQLN~YGFrKv~---------- 79 (398)
+++|+|+.|||+||+|+++++||+|+++|++|+|+|+.+|+++|||+||+|+||+||+||||+|||+|+.
T Consensus 2 ~~vp~F~~KL~~ml~~~~~~~iI~W~~~G~~fiI~d~~~f~~~vLp~~Fk~~~~~SF~RQLn~yGF~kv~~~~~~~~~~~ 81 (106)
T d1hksa_ 2 SGVPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFD 81 (106)
T ss_dssp TTCCTTHHHHHHHHSSSTTTTTSEESTTTSCEECSCCSTTTTTTSTTTTSCCCHHHHHHHHHHHCCCCSSCSSSCCSSCT
T ss_pred CCCCcHHHHHHHHHhCcCCCCEEEEcCCCCEEEEcCHHHHHHHHhhhhccccCHHHHHHHHHHCCCEEeeccccccccCC
Confidence 5689999999999999999999999999999999999999999999999999999999999999999983
Q ss_pred CCceeEecCCcccccccccccceec
Q 015923 80 PDRYEFANEGFLRGQKHLLKSISRR 104 (398)
Q Consensus 80 ~d~~eF~h~~F~Rg~~~LL~~IkRr 104 (398)
++.|+|+|++|+||+++||..|+||
T Consensus 82 ~~~~~f~h~~F~Rg~p~ll~~IkRr 106 (106)
T d1hksa_ 82 RDEIEFSHPFFKRNSPFLLDQIKRK 106 (106)
T ss_dssp TSTTEECCTTCCSSCTTSTTTCCCC
T ss_pred CCccEEECccccCCCHHHHhhCcCC
Confidence 4578999999999999999999886
No 2
>d2htsa_ a.4.5.22 (A:) Heat-shock transcription factor {Milk yeast (Kluyveromyces lactis) [TaxId: 28985]}
Probab=99.96 E-value=1.1e-30 Score=214.08 Aligned_cols=78 Identities=50% Similarity=0.922 Sum_probs=74.2
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcccccCCCChhhHhhhhcccCccccc-----------C
Q 015923 12 LPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVD-----------P 80 (398)
Q Consensus 12 ~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~yFkh~nfsSFvRQLN~YGFrKv~-----------~ 80 (398)
.|+|+.|||+||+|+++++||+|+++|++|+|+|+.+|++.|||+||+|+||+||+||||+|||+|+. +
T Consensus 2 ~P~F~~kL~~~l~~~~~~~iI~W~~~G~~f~I~d~~~f~~~vLp~~F~~~~~~SF~RQLn~yGF~kv~~~~~~~~~~~~~ 81 (92)
T d2htsa_ 2 RPAFVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQLNMYGWHKVQDVKSGSMLSNND 81 (92)
T ss_dssp CCHHHHHHHHHHHCGGGTTTCEECTTSSSEEESCHHHHHHHTHHHHCTTCCHHHHHHHHHHTTEECCCCSCTTC----CC
T ss_pred CCChHHHHHHHHcCcCCCCEEEEeCCCCEEEEeCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCeEEeecCCCCCcccCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999984 4
Q ss_pred CceeEecCC
Q 015923 81 DRYEFANEG 89 (398)
Q Consensus 81 d~~eF~h~~ 89 (398)
+.|||+|+.
T Consensus 82 ~~~eF~h~~ 90 (92)
T d2htsa_ 82 SRWEFENER 90 (92)
T ss_dssp CCEEEEESC
T ss_pred CCEEEecCC
Confidence 689999984
No 3
>d1pp7u_ a.4.5.44 (U:) 39 kda initiator binding protein, IBP39, N-terminal domain {Trichomonas vaginalis [TaxId: 5722]}
Probab=94.73 E-value=0.0052 Score=50.44 Aligned_cols=75 Identities=17% Similarity=0.352 Sum_probs=54.1
Q ss_pred CCcHHHHHHHhcc----CCCCCCc--eEEcCCCCeEEEecccchhhhhcccccCCCChhhHhhhhcccCcccccC---Cc
Q 015923 12 LPPFLSKIYDMVE----DPSTNDI--VSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVDP---DR 82 (398)
Q Consensus 12 ~~~Fl~KLy~mle----d~~~~~i--IsWs~~G~sFvI~d~~~F~~~vLP~yFkh~nfsSFvRQLN~YGFrKv~~---d~ 82 (398)
-..|..|||.+|. +|+.... |.|.+++. |.| +...|++.+ - .+-.|.-.-|..|||.++.+ +.
T Consensus 27 ~~rF~~KL~naL~~t~~~P~~~~~iGv~Wi~d~~-f~V-nk~~fa~lL-g-----iK~ntlN~Nfr~~gF~q~~~d~~~~ 98 (114)
T d1pp7u_ 27 NSRFPRKLHMLLTYLASNPQLEEEIGLSWISDTE-FKM-KKKNVALVM-G-----IKLNTLNVNLRDLAFEQLQHDKGGW 98 (114)
T ss_dssp GGSHHHHHHHHHHHHTTCHHHHHHHTEEESSSSC-EEE-CHHHHHHHH-T-----CCHHHHHHHHHHTTCEEEEEEETTE
T ss_pred cCCchHHHHHHHHHHHhChhhhhccceEEecCCE-EEE-ehHHHHHHH-C-----CChhhhcCcccccCceeeecCCCcc
Confidence 5789999999997 3433222 78999996 888 998998753 2 12345555667799998864 35
Q ss_pred eeEecCCccccc
Q 015923 83 YEFANEGFLRGQ 94 (398)
Q Consensus 83 ~eF~h~~F~Rg~ 94 (398)
|.|.+++|.|..
T Consensus 99 ~~w~~~~F~~nS 110 (114)
T d1pp7u_ 99 TQWKRSGFTRNS 110 (114)
T ss_dssp EEEECTTEETTE
T ss_pred eeeccCCccccc
Confidence 677899998864
No 4
>d1flia_ a.4.5.21 (A:) Fli-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.47 E-value=0.043 Score=43.64 Aligned_cols=62 Identities=18% Similarity=0.338 Sum_probs=46.0
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcc-cccCCCChhhHhhhhccc
Q 015923 12 LPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTY 73 (398)
Q Consensus 12 ~~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~Y 73 (398)
......=|.++|.|+++.++|+|...+.-|.+.|+.+.++.-=- +-=..-||...-|-|..|
T Consensus 5 ~~~Lw~FL~~LL~d~~~~~~I~W~~~~geFkl~~~~~VA~lWG~~Knk~~M~YeklSRaLRyY 67 (98)
T d1flia_ 5 QIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYY 67 (98)
T ss_dssp SCCSHHHHHHHHHTCSSCSSEECTTSSSSCEECCHHHHHHHHHHHTCCTTCSSHHHHHHHHHH
T ss_pred cccHHHHHHHHhcCcccCCceEEECCCCEEEeCCHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Confidence 34455667889999999999999888888999999888775321 111223788888888776
No 5
>d1awca_ a.4.5.21 (A:) GA binding protein (GABP) alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.44 E-value=0.034 Score=45.13 Aligned_cols=56 Identities=18% Similarity=0.333 Sum_probs=44.1
Q ss_pred HHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcc-cccCCCChhhHhhhhccc
Q 015923 18 KIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTY 73 (398)
Q Consensus 18 KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~Y 73 (398)
=|.++|+|++..++|+|...+.-|.+.|+.+.++.-=. +-=..-||...-|-|..|
T Consensus 6 FL~~LL~d~~~~~~I~Wt~~~geFkl~d~e~VA~lWG~~Knk~~M~YeklSRaLRyY 62 (110)
T d1awca_ 6 FLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYY 62 (110)
T ss_dssp HHHHHHTCTTTTTTSEECSSSSEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGG
T ss_pred HHHHHHcCcccCCCcEEECCCCEEEeCCHHHHHHHHHHhhCCCcccHHHHHHHHHHH
Confidence 46788999999999999999999999999988775321 112344788888888887
No 6
>d1duxc_ a.4.5.21 (C:) Elk-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.44 E-value=0.037 Score=43.08 Aligned_cols=55 Identities=22% Similarity=0.413 Sum_probs=42.0
Q ss_pred HHHhccCCCCCCceEEcC-CCCeEEEecccchhhhhcc-cccCCCChhhHhhhhccc
Q 015923 19 IYDMVEDPSTNDIVSWSS-SNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTY 73 (398)
Q Consensus 19 Ly~mled~~~~~iIsWs~-~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~Y 73 (398)
|.++|.|++..++|+|.. ++.-|.+.|+.+.++.-=. +.=..-||..+-|-|..|
T Consensus 7 L~~LL~d~~~~~~I~Wt~k~~g~Fklv~~~~VA~lWG~~Knk~~MnYeklSRaLRyy 63 (86)
T d1duxc_ 7 LLQLLREQGNGHIISWTSRDGGEFKLVDAEEVARLWGLRKNKTNMNYDKLSRALRYY 63 (86)
T ss_dssp HHHHHHHCSSSSSCEEEETTTTEEECTTHHHHHHHHHHTTTCSCCCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCceEeccCCCCEEEecCHHHHHHHHHhccCCCCCCHHHHHHHHHHH
Confidence 566788999999999999 6889999999988875311 111234788888888776
No 7
>d1hbxg_ a.4.5.21 (G:) Serum response factor accessory protein 1a, SAP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.40 E-value=0.07 Score=45.62 Aligned_cols=69 Identities=19% Similarity=0.439 Sum_probs=52.5
Q ss_pred HHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcc-cccCCCChhhHhhhhcccC----cccccCCceeEe
Q 015923 18 KIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYG----FRKVDPDRYEFA 86 (398)
Q Consensus 18 KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YG----FrKv~~d~~eF~ 86 (398)
=|.++|.|++..++|+|...+.-|.+.|+++.++.-=- |.=..-||..+-|-|..|- .+||...+..|.
T Consensus 9 FL~~LL~d~~~~~~I~Wt~~~geFkl~~~~~VA~lWG~rKnk~~M~YeklSRaLRyYY~k~il~Kv~g~r~~Yk 82 (155)
T d1hbxg_ 9 FLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 82 (155)
T ss_dssp HTTTSSSCGGGTTTEEECSSSSCEEETTHHHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEECSSCTTEEE
T ss_pred HHHHHHcCccCCCceEEECCCCEEEeCCHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCCEeeccCceeEEE
Confidence 46678999999999999999999999999999885322 2123458999999998873 345566677775
No 8
>d1gvja_ a.4.5.21 (A:) ETS-1 transcription factor, residues 331-440 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.57 E-value=0.057 Score=45.52 Aligned_cols=74 Identities=20% Similarity=0.307 Sum_probs=52.3
Q ss_pred CcHHHHHHHhccCCCCCCceEEcCCCCeEEEecccchhhhhcc-cccCCCChhhHhhhhcccCc----ccccCCceeEe
Q 015923 13 PPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGF----RKVDPDRYEFA 86 (398)
Q Consensus 13 ~~Fl~KLy~mled~~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YGF----rKv~~d~~eF~ 86 (398)
-..-.=|.++|.|++..++|+|...+..|.+.|+.+.++.-=- +-=..-||...-|-|..|-= +||...+..|.
T Consensus 40 i~LWqFLleLL~d~~~~~~I~Wt~~~~eFkl~d~e~VA~lWG~~Knk~~MnYeKmSRALRyYY~k~il~Kv~g~rl~Yk 118 (142)
T d1gvja_ 40 IQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYR 118 (142)
T ss_dssp CCHHHHHHHHHTCGGGTTTSEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHTTSEEECTTSSSEEE
T ss_pred eeHHHHHHHHHcCCccCCccEEECCCCeEEeCCHHHHHHHHHhhcCCCCccHHHHhHHHHHHhhcceEEecCCcEEEEe
Confidence 3455667889999999999999999889999999998875311 11123478888888877632 23444455553
No 9
>d1puee_ a.4.5.21 (E:) Transcription factor PU.1, residues 171-259 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.51 E-value=0.11 Score=40.41 Aligned_cols=56 Identities=16% Similarity=0.325 Sum_probs=38.0
Q ss_pred HHHHhccCCCCCCceEEcCCCC-eEEEe--cccchhhhhc-cc-ccCCCChhhHhhhhccc
Q 015923 18 KIYDMVEDPSTNDIVSWSSSNN-SFIVW--KVAEFSRDLL-PK-YFKHSNFSSFVRQLNTY 73 (398)
Q Consensus 18 KLy~mled~~~~~iIsWs~~G~-sFvI~--d~~~F~~~vL-P~-yFkh~nfsSFvRQLN~Y 73 (398)
=|.++|.||++.++|+|...+. .|-+. ++.+.++.-= -+ .=..=||...-|-|..|
T Consensus 7 FL~~LL~d~~~~~~I~Wt~~~~g~F~fv~~~~e~VA~lWG~~K~Nr~~MnYeklSRaLRyY 67 (88)
T d1puee_ 7 FLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNY 67 (88)
T ss_dssp HHHHHHHHTCCTTTEEEEETTTTEEEECTTTHHHHHHHHHHHHTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHcCccCCCceEeeCCCCceEEEEeCCHHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence 3678889999999999987665 35554 4666666321 01 11234899999988876
No 10
>d1wwxa1 a.4.5.21 (A:8-101) E74-like factor 5 ese-2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.69 E-value=0.32 Score=38.14 Aligned_cols=56 Identities=20% Similarity=0.331 Sum_probs=39.8
Q ss_pred HHHHhccCCC-CCCceEEcCC-CCeEEEecccchhhhhc-ccccCCCChhhHhhhhccc
Q 015923 18 KIYDMVEDPS-TNDIVSWSSS-NNSFIVWKVAEFSRDLL-PKYFKHSNFSSFVRQLNTY 73 (398)
Q Consensus 18 KLy~mled~~-~~~iIsWs~~-G~sFvI~d~~~F~~~vL-P~yFkh~nfsSFvRQLN~Y 73 (398)
=|.++|.||+ ..++|+|... ..-|.+.|+.+.++.-= -+-=..=||...-|-|..|
T Consensus 7 FL~~LL~d~~~~~~~I~Wt~k~~g~Fkl~d~~~VA~lWG~~K~~~~M~YeklSRaLRyY 65 (94)
T d1wwxa1 7 FVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYY 65 (94)
T ss_dssp HHHHHHHCTTTCCSCCEEEETTTTEEECSCHHHHHHHHHHHHTCTTCCHHHHHHHHHHH
T ss_pred HHHHHHcCCccCCCeEEEEcCCCcEEEEcCHHHHHHHHHhhcCCCCCcHHHHHHHHHHH
Confidence 3677888875 4679999984 45799999998877421 1111235788888888877
No 11
>d1yo5c1 a.4.5.21 (C:247-334) Sam pointed domain containing ets transcription SPDEF {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.50 E-value=0.28 Score=38.10 Aligned_cols=59 Identities=15% Similarity=0.250 Sum_probs=42.8
Q ss_pred HHHHhccCCC-CCCceEEcCCCC-eEEEecccchhhhhcc-cccCCCChhhHhhhhcccCcc
Q 015923 18 KIYDMVEDPS-TNDIVSWSSSNN-SFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGFR 76 (398)
Q Consensus 18 KLy~mled~~-~~~iIsWs~~G~-sFvI~d~~~F~~~vLP-~yFkh~nfsSFvRQLN~YGFr 76 (398)
=|.++|.||+ ..++|+|...+. -|.+.|+++.++.-=- +-=..-||..+-|-|..|--+
T Consensus 8 FL~~LL~d~~~~~~~I~Wt~~~~g~Fkl~~~~~VA~lWG~~Knk~~M~YeklSRALRyYY~~ 69 (88)
T d1yo5c1 8 FLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYKK 69 (88)
T ss_dssp HHHHHHHCHHHHTTTEEEEETTTTEEEESCHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTTT
T ss_pred HHHHHHcCccccCCCeEEECCCCceEEecCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhc
Confidence 4667788874 589999987665 7999999998875211 111345789999999888643
No 12
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=42.19 E-value=54 Score=24.47 Aligned_cols=55 Identities=11% Similarity=0.236 Sum_probs=30.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 132 GLEEEVEILKRDKNVLMQELVRLRQ-QQQATDRQLHTVGQRVQVMEQRQQQMMSFL 186 (398)
Q Consensus 132 ~Le~Eve~LKrD~~~L~qEL~~LRQ-qqq~~e~qLq~L~~RLq~mE~rQqqmmsfL 186 (398)
.+..+++.|+.+++.+-.++-++.. .-..+..++..+.+.+..+|...+.+-.-+
T Consensus 39 ~l~~~~e~l~~~rN~~sk~i~k~~~~~~~~l~~~~k~lk~~i~~le~~~~~~~~~l 94 (110)
T d1seta1 39 ELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEARL 94 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777777777666643321 122334455555566666665555544433
No 13
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.14 E-value=48 Score=27.15 Aligned_cols=17 Identities=12% Similarity=0.268 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHHH
Q 015923 136 EVEILKRDKNVLMQELV 152 (398)
Q Consensus 136 Eve~LKrD~~~L~qEL~ 152 (398)
|.+.|+.++..++..+.
T Consensus 3 e~~~Le~E~~~~~erI~ 19 (148)
T d2azea1 3 ECQNLEVERQRRLERIK 19 (148)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 34445555444444333
No 14
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.75 E-value=31 Score=25.07 Aligned_cols=30 Identities=17% Similarity=0.266 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 136 EVEILKRDKNVLMQELVRLRQQQQATDRQL 165 (398)
Q Consensus 136 Eve~LKrD~~~L~qEL~~LRQqqq~~e~qL 165 (398)
-|..|+.+...|..|+..|+++...+..++
T Consensus 53 yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l 82 (88)
T d1nkpa_ 53 YILSVQAEEQKLISEEDLLRKRREQLKHKL 82 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555555444444333
No 15
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=29.77 E-value=72 Score=21.76 Aligned_cols=25 Identities=16% Similarity=0.100 Sum_probs=16.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQ 157 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQq 157 (398)
++.|+++|.++...|..++.++..+
T Consensus 2 ~~~E~~RL~K~l~kl~~~i~~~~~k 26 (66)
T d1ivsa1 2 VEEWRRRQEKRLKELLALAERSQRK 26 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777777666666666554
No 16
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.87 E-value=29 Score=24.95 Aligned_cols=29 Identities=17% Similarity=0.421 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 137 VEILKRDKNVLMQELVRLRQQQQATDRQL 165 (398)
Q Consensus 137 ve~LKrD~~~L~qEL~~LRQqqq~~e~qL 165 (398)
|..|+.+...|..|+..|+++...+..+|
T Consensus 49 I~~L~~~~~~l~~~~~~l~~~~~~L~~~l 77 (83)
T d1nkpb_ 49 IQYMRRKNHTHQQDIDDLKRQNALLEQQV 77 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555555554444443
No 17
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=27.93 E-value=69 Score=24.38 Aligned_cols=35 Identities=23% Similarity=0.345 Sum_probs=17.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHT 167 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~ 167 (398)
.++=++.+++....|...+..+.++...+..++..
T Consensus 86 ~~eA~~~l~~ri~~l~~~~~~l~~~~~~~~~~i~~ 120 (133)
T d1fxkc_ 86 FEDAMESIKSQKNELESTLQKMGENLRAITDIMMK 120 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555556666555555555444444333333333
No 18
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=25.32 E-value=81 Score=23.92 Aligned_cols=16 Identities=6% Similarity=0.104 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHHHH
Q 015923 139 ILKRDKNVLMQELVRL 154 (398)
Q Consensus 139 ~LKrD~~~L~qEL~~L 154 (398)
+|....+.|.+++..|
T Consensus 5 eL~~~~~~l~~~l~~l 20 (133)
T d1fxkc_ 5 EIVAQLNIYQSQVELI 20 (133)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333434333333333
No 19
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.09 E-value=65 Score=24.43 Aligned_cols=31 Identities=19% Similarity=0.377 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 146 VLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (398)
Q Consensus 146 ~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE 176 (398)
.|..||..|.++-+.++..+..+.++|+.+-
T Consensus 5 ~L~~El~~L~~~E~~LD~li~~~~~~L~~lt 35 (101)
T d2azeb1 5 GLTQDLRQLQESEQQLDHLMNICTTQLRLLS 35 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4555555665555555555666655555443
No 20
>d1zyma1 a.60.10.1 (A:22-144) Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain {Escherichia coli [TaxId: 562]}
Probab=22.57 E-value=1.5e+02 Score=22.29 Aligned_cols=56 Identities=9% Similarity=0.141 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcChhHHHHHhhh
Q 015923 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME-QRQQQMMSFLAKAMHSPSFLSQLVQQ 202 (398)
Q Consensus 133 Le~Eve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RLq~mE-~rQqqmmsfLak~~q~P~fl~qlvq~ 202 (398)
.+.|+.+|+.-......||. .+.+++...- .....++..-..++++|.|+......
T Consensus 15 v~~E~~rl~~A~~~~~~~L~--------------~l~~~~~~~~~~e~a~If~ah~~iL~D~~l~~~v~~~ 71 (123)
T d1zyma1 15 VDQEVERFLSGRAKASAQLE--------------TIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIAL 71 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHhcCHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 45566665555444444444 4444443221 23345777777789999999887755
No 21
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=21.97 E-value=1.2e+02 Score=21.12 Aligned_cols=45 Identities=13% Similarity=0.326 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHH
Q 015923 137 VEILKRDKNVLMQELVRLRQQQ------QATDRQLHTVGQRVQVMEQRQQQ 181 (398)
Q Consensus 137 ve~LKrD~~~L~qEL~~LRQqq------q~~e~qLq~L~~RLq~mE~rQqq 181 (398)
+..|+.+...|..+|..+.... ....+++..|.+.+...+.|...
T Consensus 5 l~~L~~~~~~L~~~i~k~~~~leknP~skK~~nk~~el~~Q~~s~~~ki~E 55 (65)
T d1lrza1 5 IKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEE 55 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666777777776665532 22334444444444444444443
No 22
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.52 E-value=97 Score=23.38 Aligned_cols=36 Identities=19% Similarity=0.197 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015923 137 VEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRV 172 (398)
Q Consensus 137 ve~LKrD~~~L~qEL~~LRQqqq~~e~qLq~L~~RL 172 (398)
+..|+.|.+.|.++=.+|-+....+..+|..|.+-.
T Consensus 3 ~~~L~~El~~L~~~E~~LD~li~~~~~~L~~lted~ 38 (101)
T d2azeb1 3 LEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSEDT 38 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 455666666666666666666666666666665433
No 23
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.17 E-value=78 Score=22.18 Aligned_cols=22 Identities=14% Similarity=0.347 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 015923 137 VEILKRDKNVLMQELVRLRQQQ 158 (398)
Q Consensus 137 ve~LKrD~~~L~qEL~~LRQqq 158 (398)
|..|+.+...|..|+..|+.++
T Consensus 49 I~~L~~~~~~l~~~~~~L~~~~ 70 (79)
T d1nlwa_ 49 IKKLEDSDRKAVHQIDQLQREQ 70 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444443
Done!