Citrus Sinensis ID: 015925
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 398 | ||||||
| 255539763 | 378 | conserved hypothetical protein [Ricinus | 0.929 | 0.978 | 0.661 | 1e-133 | |
| 224122636 | 406 | predicted protein [Populus trichocarpa] | 0.967 | 0.948 | 0.658 | 1e-127 | |
| 225466097 | 395 | PREDICTED: uncharacterized protein LOC10 | 0.964 | 0.972 | 0.647 | 1e-126 | |
| 224134460 | 406 | predicted protein [Populus trichocarpa] | 0.969 | 0.950 | 0.645 | 1e-123 | |
| 449438173 | 416 | PREDICTED: BAG family molecular chaperon | 0.967 | 0.925 | 0.614 | 1e-117 | |
| 297797203 | 447 | BCL-2-associated athanogene 7 [Arabidops | 0.947 | 0.843 | 0.515 | 1e-105 | |
| 15241803 | 446 | BCL-2-associated athanogene 7 [Arabidops | 0.947 | 0.845 | 0.501 | 1e-103 | |
| 217075106 | 393 | unknown [Medicago truncatula] | 0.912 | 0.923 | 0.546 | 1e-100 | |
| 296084200 | 259 | unnamed protein product [Vitis vinifera] | 0.638 | 0.980 | 0.715 | 5e-88 | |
| 255641831 | 376 | unknown [Glycine max] | 0.796 | 0.843 | 0.508 | 3e-83 |
| >gi|255539763|ref|XP_002510946.1| conserved hypothetical protein [Ricinus communis] gi|223550061|gb|EEF51548.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 264/399 (66%), Positives = 318/399 (79%), Gaps = 29/399 (7%)
Query: 1 MRRFRKVELLEP-YYPPVLVRETSIFPSF-VEDEVHDLSSALDFFNPALDFFNPSPTPFE 58
M RFR++E+ +P YYP +T FPSF VE+E HDL ALD P + P E
Sbjct: 1 MSRFRRIEIFDPFYYPSFFTPKTPAFPSFTVEEEFHDLGFALDLLKP-------NSYPSE 53
Query: 59 IFDSVTDLVRIDQTPSFYSYKRIQRRTAPELSVQTLCDRVSLLESRFDRLL-SAGVDGGD 117
+FD L+++++TPSF SYKRI++R EL +QTLCDRVS LESRFD+LL S ++GGD
Sbjct: 54 LFD----LIQVEKTPSFCSYKRIKQRAGTELYIQTLCDRVSALESRFDKLLTSKKINGGD 109
Query: 118 RKYTWTAEIEGGAVDRKYKWTAEIKKGKKKKEEEKKVDKSYKWTAKIKGKDDE---SRTY 174
RKYTWTAEI+G V+RKYKWT+EIK+GKK +E DK YKW A+IKGK+++ +R Y
Sbjct: 110 RKYTWTAEIKG-PVERKYKWTSEIKEGKKHQE-----DKKYKWIAEIKGKEEDQPITRKY 163
Query: 175 TFVASTVDAGEGSKSEKKEKEKKKEKKKCESATRVVEIEEPAADHGAVVLRQAFAKRFGS 234
TF AST GE S SEKK +KK+K+K RVVEI+E +DHGAVVLRQAFAKR G
Sbjct: 164 TFEAST---GESSGSEKK---EKKDKRKKHGGVRVVEIKEEDSDHGAVVLRQAFAKRAGV 217
Query: 235 VRNNKGKQKELSPQDAAMMIQITFRAYLIRRSQALRALRDLAVAKTKLKEIRALFNNFSY 294
VR NKGK+KEL P+DAA++IQ++FR YL+RRS+ALRALR+LA+AK KLKEIRALF+NFSY
Sbjct: 218 VRANKGKKKELDPEDAALLIQMSFRTYLLRRSKALRALRELAIAKAKLKEIRALFHNFSY 277
Query: 295 RQIVSRDAEERQRFSEKIIVLLLTVDAIEGADLMVRAAKRSMVDELEAMLDVVDPQPAGR 354
R+ ++RDAEERQRFSEKIIVLLLTVDAIEGADLMVRAAKRSMVDELEAMLDVVDPQP G+
Sbjct: 278 RRQIARDAEERQRFSEKIIVLLLTVDAIEGADLMVRAAKRSMVDELEAMLDVVDPQPPGK 337
Query: 355 SLSMRRRTFDMPDGVIQKEIAAGVSQVVQMLDDEKSGNS 393
SLSMRRRTFDMPDGVIQKEIA GV+QVVQML++E++ S
Sbjct: 338 SLSMRRRTFDMPDGVIQKEIAEGVAQVVQMLEEEENLES 376
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224122636|ref|XP_002318887.1| predicted protein [Populus trichocarpa] gi|222859560|gb|EEE97107.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225466097|ref|XP_002265974.1| PREDICTED: uncharacterized protein LOC100246705 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224134460|ref|XP_002321829.1| predicted protein [Populus trichocarpa] gi|118487143|gb|ABK95400.1| unknown [Populus trichocarpa] gi|222868825|gb|EEF05956.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449438173|ref|XP_004136864.1| PREDICTED: BAG family molecular chaperone regulator 7-like [Cucumis sativus] gi|449478903|ref|XP_004155449.1| PREDICTED: BAG family molecular chaperone regulator 7-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297797203|ref|XP_002866486.1| BCL-2-associated athanogene 7 [Arabidopsis lyrata subsp. lyrata] gi|297312321|gb|EFH42745.1| BCL-2-associated athanogene 7 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|15241803|ref|NP_201045.1| BCL-2-associated athanogene 7 [Arabidopsis thaliana] gi|75264269|sp|Q9LVA0.1|BAG7_ARATH RecName: Full=BAG family molecular chaperone regulator 7; AltName: Full=Bcl-2-associated athanogene 7 gi|8809652|dbj|BAA97203.1| unnamed protein product [Arabidopsis thaliana] gi|20260358|gb|AAM13077.1| unknown protein [Arabidopsis thaliana] gi|22136176|gb|AAM91166.1| unknown protein [Arabidopsis thaliana] gi|332010220|gb|AED97603.1| BCL-2-associated athanogene 7 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|217075106|gb|ACJ85913.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|296084200|emb|CBI24588.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255641831|gb|ACU21184.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 398 | ||||||
| TAIR|locus:2167943 | 446 | BAG7 "AT5G62390" [Arabidopsis | 0.577 | 0.515 | 0.598 | 2.1e-92 | |
| TAIR|locus:2093782 | 551 | AT3G29310 "AT3G29310" [Arabido | 0.268 | 0.194 | 0.303 | 0.00047 |
| TAIR|locus:2167943 BAG7 "AT5G62390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 682 (245.1 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
Identities = 143/239 (59%), Positives = 179/239 (74%)
Query: 160 WTAKIKGKDDE---SRTYTFVASTVDAXXXXXXXXXXXXXXXXXXXCESATRVVEIEEP- 215
WT ++K + + S TY A+T + TRVV IEE
Sbjct: 207 WTTEVKSERENGEVSHTYIIKATTGGEKKKKHEEKEKKEKIETKSKKKEKTRVVVIEEEE 266
Query: 216 -----AADHGAVVLRQAFAKRFGSVRNNKGKQKELSPQDAAMMIQITFRAYLIRRSQALR 270
+++HGA+VLR+AF++R G+VR KGK KE+ P+ AA+MIQ F+AYLIRRS++LR
Sbjct: 267 EEDDESSEHGAIVLRKAFSRRNGAVRTKKGKNKEMPPEYAAVMIQRAFKAYLIRRSKSLR 326
Query: 271 ALRDLAVAKTKLKEIRALFNNFSYRQIVSRDAEERQRFSEKIIVLLLTVDAIEGADLMVR 330
ALRDLA+AKTKLKE+RA F+NFSYR++++RD EERQ+FSEKIIVLLLTVDAIEG D+MVR
Sbjct: 327 ALRDLAIAKTKLKELRASFHNFSYRRLIARDGEERQKFSEKIIVLLLTVDAIEGVDVMVR 386
Query: 331 AAKRSMVDELEAMLDVVDPQPAGRSLSMRRRTFDMPDGVIQKEIAAGVSQVVQMLDDEK 389
AKRSMVDELEAMLDVVDPQP G+SLSMRRRTFDMPD +I+KEIA GV+Q+VQML+ E+
Sbjct: 387 GAKRSMVDELEAMLDVVDPQPQGKSLSMRRRTFDMPDSLIRKEIAEGVTQIVQMLETEE 445
|
|
| TAIR|locus:2093782 AT3G29310 "AT3G29310" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 398 | |||
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.004 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 39.4 bits (91), Expect = 0.004
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 133 RKYKWTAEIKKGKKKKEEEKKVDKSYKWTAKIKGKDDESRTYTFVASTVDAGEGSKSEKK 192
+K + + + KKK EE KK D++ K + K K D ++ A +++E
Sbjct: 1296 KKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAA 1355
Query: 193 EKEKKKEKKKCESATRVVEIEEPAAD 218
E + ++K E+A + E + AD
Sbjct: 1356 ADEAEAAEEKAEAAEKKKEEAKKKAD 1381
|
Length = 2084 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 398 | |||
| PF02179 | 76 | BAG: BAG domain; InterPro: IPR003103 BAG domains a | 99.05 | |
| smart00264 | 79 | BAG BAG domains, present in regulator of Hsp70 pro | 98.76 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 97.3 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 96.67 | |
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 83.66 |
| >PF02179 BAG: BAG domain; InterPro: IPR003103 BAG domains are present in Bcl-2-associated athanogene 1 and silencer of death domains | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.8e-10 Score=89.03 Aligned_cols=70 Identities=23% Similarity=0.414 Sum_probs=56.7
Q ss_pred HHHHHHHHH-HHHHhccccchhccccCHHHHHHHHHHHHHHHhhcccc-ccCChHHHHHHHhHHHHHHHHHhhhcC
Q 015925 276 AVAKTKLKE-IRALFNNFSYRQIVSRDAEERQRFSEKIIVLLLTVDAI-EGADLMVRAAKRSMVDELEAMLDVVDP 349 (398)
Q Consensus 276 a~vKsklke-lr~l~~~~~~r~~i~~D~eER~riSE~iM~LLLrLDSI-QG~Dp~VRe~RKSvsrEL~~~qD~VDs 349 (398)
..+..++.. +...+..+ ..+.+.+++.+++|.+|++|++||+| .+.+|.||+.||+++++++.+++.+|+
T Consensus 3 ~~i~~~v~~~l~~~v~~~----~~~~~~~~~~~l~E~L~~~LlkLD~I~~~g~~~iR~~RK~~v~~iq~~l~~lD~ 74 (76)
T PF02179_consen 3 EKIIDEVEKELQPEVEQF----DGKKDEKEYLRLSEMLMQLLLKLDSIETEGNPEIREKRKQAVKRIQQLLDKLDS 74 (76)
T ss_dssp HHHHHHHHHCHHHHHHHH----HHHHCCHHHHHHHHHHHHHHHHHHTCECSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH----hccCcHHHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHHHc
Confidence 334444444 55555544 34556789999999999999999999 789999999999999999999999985
|
The BAG proteins are modulators of chaperone activity, they bind to HSP70/HSC70 proteins and promote substrate release. The proteins have anti-apoptotic activity and increase the anti-cell death function of BCL-2 induced by various stimuli. BAG-1 binds to the serine/threonine kinase Raf-1 or Hsc70/Hsp70 in a mutually exclusive interaction. BAG-1 promotes cell growth by binding to and stimulating Raf-1 activity. The binding of Hsp70 to BAG-1 diminishes Raf-1 signalling and inhibits subsequent events, such as DNA synthesis, as well as arrests the cell cycle. BAG-1 has been suggested to function as a molecular switch that encourages cells to proliferate in normal conditions but become quiescent under a stressful environment []. BAG-family proteins contain a single BAG domain, except for human BAG-5 which has four BAG repeats. The BAG domain is a conserved region located at the C terminus of the BAG-family proteins that binds the ATPase domain of Hsc70/Hsp70. The BAG domain is evolutionarily conserved, and BAG domain containing proteins have been described and/or proven in a variety of organisms including Mus musculus (Mouse), Xenopus spp., Drosophila spp., Bombyx mori (Silk moth), Caenorhabditis elegans, Saccharomyces cerevisiae (Baker's yeast), Schizosaccharomyces pombe (Fission yeast), and Arabidopsis thaliana (Mouse-ear cress). The BAG domain has 110-124 amino acids and is comprised of three anti-parallel alpha-helices, each approximately 30-40 amino acids in length. The first and second helices interact with the serine/threonine kinase Raf-1 and the second and third helices are the sites of the BAG domain interaction with the ATPase domain of Hsc70/Hsp70. Binding of the BAG domain to the ATPase domain is mediated by both electrostatic and hydrophobic interactions in BAG-1 and is energy requiring.; GO: 0051087 chaperone binding; PDB: 1M7K_A 1M62_A 1T7S_A 1UGO_A 1I6Z_A 3A8Y_C 1UK5_A 3FZM_B 3FZL_B 3M3Z_B .... |
| >smart00264 BAG BAG domains, present in regulator of Hsp70 proteins | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 398 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 3e-05
Identities = 57/389 (14%), Positives = 117/389 (30%), Gaps = 106/389 (27%)
Query: 17 VLVRETSIFPSFVEDEVHDLSSALDFFNPALDFFNPSPT-PFEIFDSVTDLVRIDQTPSF 75
+L ++ + FVE+ L F + P+ ++ D R+
Sbjct: 71 LLSKQEEMVQKFVEEV---LRINYKFLMSPIKTEQRQPSMMTRMYIEQRD--RLYNDNQV 125
Query: 76 YSYKRIQRRTAPELSVQTLCDRVSLLESRFDRLLSAGVDG--GDRKYTWTAEIEGGAVDR 133
++ + R + L R +LLE R + + +DG G K TW A V
Sbjct: 126 FAKYNVSR---LQP-YLKL--RQALLELRPAKNV--LIDGVLGSGK-TWVA----LDVCL 172
Query: 134 KYK----------WTAEIKKGKKKKEE---EKKVDKSYKWTAKIKGKDDESRTYTFVAST 180
YK W + E E Y+ + D S +
Sbjct: 173 SYKVQCKMDFKIFW---LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229
Query: 181 VDAGEGSKSEKKEKEKKKEKKKC-------ESA---------------TRVVEI------ 212
+ ++E + K K + C ++A TR ++
Sbjct: 230 I------QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSA 283
Query: 213 ---EEPAADHGAVVL-----RQAFAKRFGSVRNNKGKQKELSPQD-----------AAMM 253
+ DH ++ L + K + ++L + A +
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLDC------RPQDLPREVLTTNPRRLSIIAESI 337
Query: 254 IQ--ITFRAYLIRRSQALRALRDLAVAKTKLKEIRALFNNFSYRQIVSRDAEERQRFSEK 311
T+ + L + + ++ + E R +F+ S + A
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS---VFPPSA----HIPTI 390
Query: 312 IIVLL-LTVDAIEGADLMVRAAKRSMVDE 339
++ L+ V + ++ + K S+V++
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLHKYSLVEK 419
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 398 | |||
| 1m62_A | 87 | BAG-family molecular chaperone regulator-4; BAG do | 98.68 | |
| 1uk5_A | 111 | BAG-family molecular chaperone regulator-3; triple | 98.65 | |
| 1m7k_A | 99 | Silencer of death domains; three helix bundle, cha | 98.62 | |
| 1ugo_A | 99 | BCL2-associated athanogene 5; triple helix bundle, | 98.61 | |
| 3a8y_C | 142 | BAG family molecular chaperone regulator 5; BAG do | 98.5 | |
| 2l53_B | 31 | CAM, voltage-gated sodium channel type V alpha iso | 97.48 | |
| 2kxw_B | 27 | Sodium channel protein type 2 subunit alpha; actio | 97.41 | |
| 2ix7_C | 58 | Myosin-5A; contractIle protein/metal binding, acti | 96.81 | |
| 2d9d_A | 89 | BAG family molecular chaperone regulator 5; triple | 96.68 | |
| 1n2d_C | 48 | IQ2 and IQ3 motifs from MYO2P, A class V myosin; p | 96.37 | |
| 1n2d_C | 48 | IQ2 and IQ3 motifs from MYO2P, A class V myosin; p | 96.3 | |
| 2ix7_C | 58 | Myosin-5A; contractIle protein/metal binding, acti | 95.61 | |
| 1i6z_A | 135 | BAG-family molecular chaperone regulator-1; triple | 93.35 | |
| 1t7s_A | 137 | BAG-1 cochaperone; structural genomics, PSI, prote | 91.72 | |
| 1hx1_B | 114 | BAG-1, BAG-family molecular chaperone regulator-1; | 91.59 | |
| 3gn4_A | 148 | Myosin-VI; unconventional myosin, motility, lever | 91.2 | |
| 1wdc_A | 64 | Scallop myosin; calcium binding protein, muscle pr | 89.45 | |
| 2bl0_A | 63 | Major plasmodial myosin heavy chain; muscle protei | 88.62 | |
| 4dck_A | 168 | Sodium channel protein type 5 subunit alpha; IQ-mo | 88.29 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 88.06 | |
| 2bl0_A | 63 | Major plasmodial myosin heavy chain; muscle protei | 86.3 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 85.66 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 84.8 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 84.4 | |
| 1wdc_A | 64 | Scallop myosin; calcium binding protein, muscle pr | 84.08 | |
| 1kk8_A | 837 | Myosin heavy chain, striated muscle; actin-detache | 81.85 |
| >1m62_A BAG-family molecular chaperone regulator-4; BAG domain, SODD, silencer of death domains, HSP70/HSC70 CO-chaperone; NMR {Homo sapiens} SCOP: a.7.7.1 | Back alignment and structure |
|---|
Probab=98.68 E-value=4.9e-08 Score=79.90 Aligned_cols=75 Identities=17% Similarity=0.298 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccccchhccccCHHHHHHHHHHHHHHHhhcccccc-CChHHHHHHHhHHHHHHHHHhhhcC
Q 015925 271 ALRDLAVAKTKLKEIRALFNNFSYRQIVSRDAEERQRFSEKIIVLLLTVDAIEG-ADLMVRAAKRSMVDELEAMLDVVDP 349 (398)
Q Consensus 271 aLR~Ia~vKsklkelr~l~~~~~~r~~i~~D~eER~riSE~iM~LLLrLDSIQG-~Dp~VRe~RKSvsrEL~~~qD~VDs 349 (398)
+++.|..+..++++|...+..+... ...++...++|.+|..||+||+|+. .++.||..||..+++++.+++.||.
T Consensus 9 a~~~I~~I~~ev~~L~~~V~~f~g~----~~dkey~~L~E~L~k~LLkLD~Ie~eG~~~~R~~RK~~Vk~iQ~~l~~LD~ 84 (87)
T 1m62_A 9 SIKKIIHVLEKVQYLEQEVEEFVGK----KTDKAYWLLEEMLTKELLELDSVETGGQDSVRQARKEAVCKIQAILEKLEK 84 (87)
T ss_dssp THHHHHHHHHHHHHHHHHHHHCCCC----TTSHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC----cchHHHHHHHHHHHHHHHHHCCcCcCCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4778899999999999999888753 2446889999999999999999987 7999999999999999999999984
|
| >1uk5_A BAG-family molecular chaperone regulator-3; triple helix bandle, CAIR-1, BIS, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.7.7.1 | Back alignment and structure |
|---|
| >1m7k_A Silencer of death domains; three helix bundle, chaperone; NMR {Homo sapiens} SCOP: a.7.7.1 | Back alignment and structure |
|---|
| >1ugo_A BCL2-associated athanogene 5; triple helix bundle, riken structural genomics/proteomics initiative, RSGI, structural genomics, chaperone; NMR {Mus musculus} SCOP: a.7.7.1 | Back alignment and structure |
|---|
| >3a8y_C BAG family molecular chaperone regulator 5; BAG domain, HSP70, ATPase domain, protein complex, triple helix, structural genomics, NPPSFA; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus} | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} | Back alignment and structure |
|---|
| >2d9d_A BAG family molecular chaperone regulator 5; triple helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} | Back alignment and structure |
|---|
| >1i6z_A BAG-family molecular chaperone regulator-1; triple helix bundle; NMR {Mus musculus} SCOP: a.7.7.1 | Back alignment and structure |
|---|
| >1t7s_A BAG-1 cochaperone; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.80A {Caenorhabditis elegans} SCOP: a.7.7.1 | Back alignment and structure |
|---|
| >1hx1_B BAG-1, BAG-family molecular chaperone regulator-1; protein-protein complex, apoptosis, protein folding, molecul chaperone; 1.90A {Homo sapiens} SCOP: a.7.7.1 PDB: 3fzf_B* 3fzh_B* 3fzk_B* 3fzl_B* 3fzm_B* 3ldq_B* 3m3z_B* | Back alignment and structure |
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| >3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa} | Back alignment and structure |
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| >1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A | Back alignment and structure |
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| >2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
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| >4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A | Back alignment and structure |
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| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
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| >2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
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| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
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| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
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| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
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| >1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A | Back alignment and structure |
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| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... | Back alignment and structure |
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Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 398 | |||
| d1ugoa_ | 99 | BAG-family molecular chaperone regulator-5, BAG-5 | 99.25 | |
| d1m7ka_ | 81 | Silencer of death domains, Sodd (Bag4) {Human (Hom | 99.12 | |
| d1uk5a_ | 111 | BAG-family molecular chaperone regulator-3 {Mouse | 99.02 | |
| d1hx1b_ | 112 | BAG-family molecular chaperon regulator-1, BAG1 {H | 92.61 | |
| d1t7sa_ | 129 | BAG-family molecular chaperon regulator-1, BAG1 {N | 90.31 | |
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 87.77 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 86.64 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 81.57 |
| >d1ugoa_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-5, BAG-5 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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class: All alpha proteins fold: Spectrin repeat-like superfamily: BAG domain family: BAG domain domain: BAG-family molecular chaperone regulator-5, BAG-5 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.25 E-value=2.2e-12 Score=105.32 Aligned_cols=81 Identities=20% Similarity=0.345 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccccchhccccCHHHHHHHHHHHHHHHhhccccc-cCChHHHHHHHhHHHHHHHHHhhhcC
Q 015925 271 ALRDLAVAKTKLKEIRALFNNFSYRQIVSRDAEERQRFSEKIIVLLLTVDAIE-GADLMVRAAKRSMVDELEAMLDVVDP 349 (398)
Q Consensus 271 aLR~Ia~vKsklkelr~l~~~~~~r~~i~~D~eER~riSE~iM~LLLrLDSIQ-G~Dp~VRe~RKSvsrEL~~~qD~VDs 349 (398)
+|+.|..+..++++|+..+..++. ...| +++.+++|.+|++||+||+|+ +.|+.||.+||.++++++.+|+.||.
T Consensus 16 sl~~I~~i~~ev~~L~~~V~~f~~---~~~d-ke~~~L~E~L~~~LlkLD~Ie~~G~~~vR~~RK~~vk~vQ~~l~~LD~ 91 (99)
T d1ugoa_ 16 SISRLQEIQREVKAIEPQVVGFSG---LSDD-KNYKRLERILTKQLFEIDSVDTEGKGDIQQARKRAAQETERLLKELEQ 91 (99)
T ss_dssp THHHHHHHHHHHHHSHHHHHTCCC---CTTS-SHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC---ccch-HHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 488999999999999999998874 3445 699999999999999999998 89999999999999999999999998
Q ss_pred CCCCCc
Q 015925 350 QPAGRS 355 (398)
Q Consensus 350 ~~~~k~ 355 (398)
.+.++|
T Consensus 92 ka~~ps 97 (99)
T d1ugoa_ 92 NASGPS 97 (99)
T ss_dssp HHSSCS
T ss_pred cccCCC
Confidence 766655
|
| >d1m7ka_ a.7.7.1 (A:) Silencer of death domains, Sodd (Bag4) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1uk5a_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1hx1b_ a.7.7.1 (B:) BAG-family molecular chaperon regulator-1, BAG1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1t7sa_ a.7.7.1 (A:) BAG-family molecular chaperon regulator-1, BAG1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
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| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
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| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
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| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
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