Query 015926
Match_columns 398
No_of_seqs 250 out of 2524
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 02:12:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015926.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015926hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0462 PrsA Phosphoribosylpyr 100.0 1.2E-78 2.6E-83 592.8 32.4 294 85-397 2-301 (314)
2 PLN02297 ribose-phosphate pyro 100.0 3.5E-77 7.6E-82 591.1 35.6 319 79-398 8-326 (326)
3 PRK04923 ribose-phosphate pyro 100.0 7E-72 1.5E-76 553.6 33.7 296 84-397 3-305 (319)
4 PTZ00145 phosphoribosylpyropho 100.0 9.5E-72 2.1E-76 567.6 32.6 300 81-397 113-423 (439)
5 PRK02269 ribose-phosphate pyro 100.0 3.6E-71 7.8E-76 549.2 34.1 294 85-397 3-304 (320)
6 PRK00553 ribose-phosphate pyro 100.0 1.4E-70 3.1E-75 546.9 34.8 301 82-397 4-309 (332)
7 PRK02458 ribose-phosphate pyro 100.0 2.8E-70 6.1E-75 543.2 33.4 294 84-397 6-304 (323)
8 PRK07199 phosphoribosylpyropho 100.0 9E-69 2E-73 528.1 33.3 282 87-397 2-291 (301)
9 KOG1448 Ribose-phosphate pyrop 100.0 3.1E-69 6.8E-74 517.2 23.7 294 85-397 1-301 (316)
10 PRK02812 ribose-phosphate pyro 100.0 9.1E-68 2E-72 526.2 33.1 294 84-397 18-317 (330)
11 PRK03092 ribose-phosphate pyro 100.0 1.3E-67 2.8E-72 520.5 31.1 280 99-397 1-288 (304)
12 PRK01259 ribose-phosphate pyro 100.0 3.8E-66 8.1E-71 511.2 33.1 291 88-397 1-296 (309)
13 PRK06827 phosphoribosylpyropho 100.0 7.3E-66 1.6E-70 519.9 33.9 297 85-397 6-355 (382)
14 PRK00934 ribose-phosphate pyro 100.0 1.2E-65 2.6E-70 502.6 32.5 280 89-397 1-284 (285)
15 PLN02369 ribose-phosphate pyro 100.0 4.5E-64 9.8E-69 494.9 31.5 282 97-397 1-289 (302)
16 TIGR01251 ribP_PPkin ribose-ph 100.0 5.4E-63 1.2E-67 488.7 33.4 288 88-397 1-295 (308)
17 KOG1503 Phosphoribosylpyrophos 100.0 2.1E-53 4.6E-58 397.1 24.9 294 85-397 6-335 (354)
18 PF13793 Pribosyltran_N: N-ter 100.0 7.7E-35 1.7E-39 249.9 13.4 113 88-204 1-115 (116)
19 PF14572 Pribosyl_synth: Phosp 100.0 3.9E-31 8.4E-36 242.1 11.4 138 252-397 1-171 (184)
20 PRK13811 orotate phosphoribosy 99.6 2.3E-14 4.9E-19 130.8 14.7 148 195-352 3-154 (170)
21 PRK11595 DNA utilization prote 99.6 2.9E-15 6.3E-20 142.4 6.1 152 168-337 62-223 (227)
22 PRK08525 amidophosphoribosyltr 99.5 1.9E-13 4E-18 142.0 12.5 133 254-394 276-426 (445)
23 COG1040 ComFC Predicted amidop 99.5 7E-14 1.5E-18 133.1 8.5 150 167-337 65-220 (225)
24 TIGR00201 comF comF family pro 99.5 4.5E-14 9.8E-19 130.7 6.0 146 171-337 36-188 (190)
25 PLN02293 adenine phosphoribosy 99.4 1.1E-11 2.3E-16 115.0 15.2 110 240-352 51-176 (187)
26 PRK09162 hypoxanthine-guanine 99.3 1.8E-11 4E-16 112.7 11.5 100 239-338 25-134 (181)
27 TIGR01203 HGPRTase hypoxanthin 99.3 1.5E-11 3.2E-16 111.9 10.1 100 239-338 11-121 (166)
28 PRK13812 orotate phosphoribosy 99.3 1.1E-10 2.3E-15 107.4 14.3 110 240-352 45-157 (176)
29 PRK05793 amidophosphoribosyltr 99.2 5.5E-11 1.2E-15 124.4 12.2 144 242-393 276-438 (469)
30 PF00156 Pribosyltran: Phospho 99.2 1.3E-10 2.9E-15 98.8 10.9 99 239-338 13-125 (125)
31 PRK15423 hypoxanthine phosphor 99.2 1.9E-10 4.2E-15 105.9 11.8 103 239-344 17-132 (178)
32 PLN02238 hypoxanthine phosphor 99.2 2.3E-10 4.9E-15 106.3 11.8 105 239-346 20-139 (189)
33 PRK02304 adenine phosphoribosy 99.2 3.8E-10 8.3E-15 103.2 12.9 97 254-350 51-163 (175)
34 COG0634 Hpt Hypoxanthine-guani 99.2 2.7E-10 5.9E-15 103.7 11.6 103 239-344 20-133 (178)
35 PRK02277 orotate phosphoribosy 99.1 4.9E-10 1.1E-14 104.9 12.0 106 240-349 72-185 (200)
36 TIGR01090 apt adenine phosphor 99.1 6.6E-10 1.4E-14 101.1 12.2 109 240-351 35-159 (169)
37 PRK13809 orotate phosphoribosy 99.1 6E-10 1.3E-14 104.9 12.2 111 241-352 53-168 (206)
38 PRK05205 bifunctional pyrimidi 99.1 4.6E-10 9.9E-15 102.9 10.7 99 239-337 15-132 (176)
39 PRK12560 adenine phosphoribosy 99.1 1.9E-09 4E-14 100.1 13.8 125 243-371 40-180 (187)
40 PRK00129 upp uracil phosphorib 99.1 1.6E-09 3.5E-14 102.0 12.8 97 254-352 70-173 (209)
41 PRK00455 pyrE orotate phosphor 99.1 3.5E-09 7.6E-14 99.0 14.4 110 240-351 51-162 (202)
42 TIGR00336 pyrE orotate phospho 99.0 2.1E-09 4.6E-14 98.3 12.2 109 240-351 42-158 (173)
43 TIGR01367 pyrE_Therm orotate p 99.0 2.2E-09 4.8E-14 99.6 12.1 97 239-339 44-143 (187)
44 PRK07322 adenine phosphoribosy 99.0 2.9E-09 6.2E-14 97.9 12.7 96 241-336 39-155 (178)
45 PRK07272 amidophosphoribosyltr 99.0 4.2E-10 9E-15 118.1 6.3 92 296-394 345-436 (484)
46 PTZ00149 hypoxanthine phosphor 99.0 3.2E-09 6.9E-14 102.1 10.9 103 239-344 66-190 (241)
47 PTZ00271 hypoxanthine-guanine 99.0 4.3E-09 9.3E-14 99.5 10.5 103 239-344 36-158 (211)
48 COG0461 PyrE Orotate phosphori 98.9 1.2E-08 2.6E-13 95.5 13.3 96 254-352 61-162 (201)
49 PRK13810 orotate phosphoribosy 98.9 2.4E-08 5.1E-13 92.8 13.7 107 241-352 63-172 (187)
50 TIGR01091 upp uracil phosphori 98.9 1.5E-08 3.3E-13 95.3 11.9 97 254-352 68-171 (207)
51 COG1926 Predicted phosphoribos 98.9 3E-08 6.4E-13 92.8 13.1 121 239-369 10-182 (220)
52 TIGR01744 XPRTase xanthine pho 98.9 3.5E-08 7.6E-13 91.9 13.3 126 240-370 35-181 (191)
53 PRK09219 xanthine phosphoribos 98.8 7.6E-08 1.6E-12 89.6 14.1 114 254-372 50-183 (189)
54 PRK09123 amidophosphoribosyltr 98.8 4.1E-08 8.9E-13 103.1 12.1 112 240-352 281-419 (479)
55 PRK09246 amidophosphoribosyltr 98.8 5.2E-09 1.1E-13 110.5 4.7 47 296-342 353-399 (501)
56 PRK08558 adenine phosphoribosy 98.7 1.1E-07 2.3E-12 91.6 11.4 111 240-351 96-225 (238)
57 PRK06031 phosphoribosyltransfe 98.7 3.8E-07 8.2E-12 87.6 13.6 126 242-372 71-220 (233)
58 COG0856 Orotate phosphoribosyl 98.7 1.6E-07 3.5E-12 85.4 10.3 117 216-336 51-176 (203)
59 PRK05500 bifunctional orotidin 98.6 2.8E-07 6.1E-12 96.7 12.6 97 254-352 344-443 (477)
60 PLN02440 amidophosphoribosyltr 98.6 1.5E-07 3.3E-12 98.9 9.2 42 297-338 336-377 (479)
61 TIGR01743 purR_Bsub pur operon 98.6 1.2E-06 2.5E-11 85.7 13.7 108 254-371 128-254 (268)
62 PRK08341 amidophosphoribosyltr 98.6 1.3E-07 2.9E-12 98.4 7.6 102 240-342 257-375 (442)
63 PRK09213 pur operon repressor; 98.5 1.2E-06 2.5E-11 85.9 13.0 109 254-372 130-257 (271)
64 COG0503 Apt Adenine/guanine ph 98.5 1.9E-06 4.2E-11 79.5 12.5 98 240-340 42-155 (179)
65 PRK06388 amidophosphoribosyltr 98.5 8.4E-07 1.8E-11 93.2 11.0 142 171-341 253-396 (474)
66 PRK06781 amidophosphoribosyltr 98.4 4.2E-07 9E-12 95.4 7.4 47 296-342 343-389 (471)
67 TIGR01134 purF amidophosphorib 98.4 4.2E-07 9.2E-12 94.7 7.4 42 296-337 333-374 (442)
68 PRK09177 xanthine-guanine phos 98.4 1.5E-06 3.3E-11 78.4 9.8 86 239-326 18-109 (156)
69 PRK07349 amidophosphoribosyltr 98.4 8.6E-07 1.9E-11 93.6 8.7 100 240-339 298-415 (500)
70 PRK07631 amidophosphoribosyltr 98.4 2.7E-07 5.9E-12 96.8 4.8 48 296-343 343-390 (475)
71 KOG3367 Hypoxanthine-guanine p 98.3 1.5E-06 3.3E-11 79.0 7.5 105 238-345 44-166 (216)
72 KOG1712 Adenine phosphoribosyl 98.3 2.8E-06 6.1E-11 76.5 9.1 114 238-351 43-172 (183)
73 PRK07847 amidophosphoribosyltr 98.3 2.6E-06 5.7E-11 90.2 9.3 142 171-340 264-406 (510)
74 COG2236 Predicted phosphoribos 98.2 3.6E-06 7.8E-11 78.5 8.0 94 239-333 15-119 (192)
75 TIGR01251 ribP_PPkin ribose-ph 98.1 7.2E-05 1.6E-09 74.6 15.0 138 86-251 160-298 (308)
76 PLN02541 uracil phosphoribosyl 97.5 0.00068 1.5E-08 65.6 10.0 95 256-352 104-208 (244)
77 PF14681 UPRTase: Uracil phosp 97.4 0.0011 2.3E-08 62.6 10.3 96 255-352 68-172 (207)
78 COG2065 PyrR Pyrimidine operon 97.4 0.0011 2.4E-08 60.3 9.5 95 242-336 18-132 (179)
79 COG0035 Upp Uracil phosphoribo 97.2 0.0028 6.1E-08 59.9 9.8 95 256-352 72-174 (210)
80 COG0034 PurF Glutamine phospho 96.9 0.0012 2.6E-08 68.5 5.6 45 296-340 343-387 (470)
81 PRK07199 phosphoribosylpyropho 96.5 0.1 2.2E-06 52.1 15.5 134 86-251 161-294 (301)
82 KOG0572 Glutamine phosphoribos 96.3 0.0024 5.2E-08 64.9 2.9 45 295-339 350-394 (474)
83 PRK00934 ribose-phosphate pyro 96.2 0.15 3.3E-06 50.4 14.8 128 86-248 155-284 (285)
84 PRK04923 ribose-phosphate pyro 95.2 0.68 1.5E-05 46.7 15.2 142 85-251 166-308 (319)
85 PF15609 PRTase_2: Phosphoribo 94.5 0.056 1.2E-06 50.5 4.9 38 300-337 120-157 (191)
86 PLN02369 ribose-phosphate pyro 94.4 1.4 3E-05 44.1 14.8 137 88-251 154-292 (302)
87 PRK02458 ribose-phosphate pyro 94.3 1.3 2.9E-05 44.7 14.6 136 88-251 172-307 (323)
88 PRK01259 ribose-phosphate pyro 94.1 1.8 4E-05 43.3 15.1 141 86-251 159-299 (309)
89 PRK02812 ribose-phosphate pyro 94.1 1.9 4.2E-05 43.6 15.4 134 255-396 21-173 (330)
90 COG0462 PrsA Phosphoribosylpyr 93.9 0.34 7.4E-06 48.7 9.3 139 87-252 164-305 (314)
91 PTZ00145 phosphoribosylpyropho 93.7 1.6 3.5E-05 45.9 14.1 136 254-396 118-273 (439)
92 PRK15423 hypoxanthine phosphor 93.6 1.1 2.4E-05 41.4 11.6 94 86-182 35-136 (178)
93 PRK02269 ribose-phosphate pyro 93.4 1.9 4.1E-05 43.5 13.7 114 276-396 27-157 (320)
94 PRK00553 ribose-phosphate pyro 93.2 3 6.6E-05 42.3 15.0 113 275-396 30-161 (332)
95 PRK03092 ribose-phosphate pyro 92.0 1.4 3.1E-05 44.0 10.7 141 86-251 149-291 (304)
96 PRK09162 hypoxanthine-guanine 91.9 1.9 4.2E-05 39.6 10.8 88 87-177 42-135 (181)
97 PF13793 Pribosyltran_N: N-ter 90.3 5.9 0.00013 34.0 11.5 64 277-342 23-90 (116)
98 TIGR01203 HGPRTase hypoxanthin 89.3 5.6 0.00012 36.1 11.2 89 86-177 27-122 (166)
99 PLN02297 ribose-phosphate pyro 88.5 15 0.00032 37.3 14.5 117 275-396 38-176 (326)
100 PRK06827 phosphoribosylpyropho 88.5 3.2 6.9E-05 43.0 9.9 143 86-251 208-358 (382)
101 KOG1017 Predicted uracil phosp 88.3 1.3 2.9E-05 41.8 6.4 69 296-372 184-254 (267)
102 PLN02238 hypoxanthine phosphor 84.9 13 0.00029 34.5 11.2 88 87-177 37-135 (189)
103 PLN02440 amidophosphoribosyltr 83.0 11 0.00024 40.1 11.0 126 86-222 276-423 (479)
104 PRK00129 upp uracil phosphorib 81.7 15 0.00033 34.5 10.4 86 88-175 73-160 (209)
105 PTZ00271 hypoxanthine-guanine 81.3 21 0.00046 33.9 11.2 88 87-176 59-155 (211)
106 PRK02304 adenine phosphoribosy 79.9 13 0.00029 33.7 9.1 81 87-170 53-145 (175)
107 TIGR01090 apt adenine phosphor 79.4 14 0.00031 33.3 9.0 84 88-174 49-144 (169)
108 PRK09123 amidophosphoribosyltr 77.6 21 0.00045 38.2 10.9 86 86-174 296-395 (479)
109 PRK02277 orotate phosphoribosy 76.3 16 0.00035 34.1 8.7 84 87-174 87-175 (200)
110 PF15610 PRTase_3: PRTase ComF 76.3 3.2 6.9E-05 41.0 4.0 40 297-336 134-173 (274)
111 TIGR01091 upp uracil phosphori 75.9 29 0.00062 32.6 10.3 86 88-175 71-158 (207)
112 PRK07272 amidophosphoribosyltr 75.8 18 0.00038 38.7 9.7 124 87-221 287-432 (484)
113 PRK13811 orotate phosphoribosy 73.6 28 0.0006 31.7 9.3 83 88-177 59-141 (170)
114 PF00156 Pribosyltran: Phospho 72.8 40 0.00086 27.9 9.5 84 89-175 31-124 (125)
115 PF14572 Pribosyl_synth: Phosp 72.5 13 0.00028 34.7 6.9 94 133-251 79-174 (184)
116 PTZ00149 hypoxanthine phosphor 72.1 42 0.00091 32.6 10.5 89 86-176 82-187 (241)
117 TIGR01134 purF amidophosphorib 70.6 36 0.00079 35.8 10.6 122 86-221 274-420 (442)
118 PRK05793 amidophosphoribosyltr 69.8 26 0.00057 37.2 9.4 91 87-180 290-394 (469)
119 COG0634 Hpt Hypoxanthine-guani 69.7 54 0.0012 30.5 10.1 87 88-176 38-130 (178)
120 PRK05205 bifunctional pyrimidi 68.9 48 0.001 30.1 9.8 89 86-176 32-133 (176)
121 PLN02293 adenine phosphoribosy 67.6 57 0.0012 30.3 10.1 83 87-173 64-159 (187)
122 PRK08341 amidophosphoribosyltr 66.4 28 0.0006 36.8 8.6 87 86-175 272-370 (442)
123 PRK08525 amidophosphoribosyltr 65.3 32 0.0007 36.3 8.9 93 87-182 277-383 (445)
124 TIGR01367 pyrE_Therm orotate p 63.2 85 0.0018 29.0 10.4 81 86-173 59-139 (187)
125 PRK00455 pyrE orotate phosphor 62.9 59 0.0013 30.2 9.3 81 87-172 66-146 (202)
126 PRK13812 orotate phosphoribosy 62.6 57 0.0012 29.9 9.0 77 87-170 60-138 (176)
127 PF01488 Shikimate_DH: Shikima 54.3 27 0.0006 30.2 5.2 37 296-336 7-43 (135)
128 PRK09246 amidophosphoribosyltr 51.3 69 0.0015 34.4 8.6 85 87-175 295-394 (501)
129 TIGR00336 pyrE orotate phospho 48.3 1.1E+02 0.0023 27.8 8.3 72 93-169 62-138 (173)
130 PRK12560 adenine phosphoribosy 47.6 1.5E+02 0.0032 27.4 9.2 83 87-172 53-147 (187)
131 cd00158 RHOD Rhodanese Homolog 46.7 39 0.00084 25.7 4.5 34 299-335 48-81 (89)
132 smart00450 RHOD Rhodanese Homo 46.6 38 0.00083 26.0 4.5 34 299-335 54-87 (100)
133 PRK07349 amidophosphoribosyltr 44.8 1E+02 0.0022 33.3 8.5 87 86-175 313-413 (500)
134 cd01444 GlpE_ST GlpE sulfurtra 43.9 38 0.00081 26.6 4.1 33 300-335 55-87 (96)
135 cd01529 4RHOD_Repeats Member o 42.9 43 0.00093 26.6 4.3 33 300-335 55-87 (96)
136 PRK08105 flavodoxin; Provision 42.3 80 0.0017 28.0 6.3 65 85-156 1-72 (149)
137 COG2236 Predicted phosphoribos 41.6 1.7E+02 0.0036 27.6 8.5 71 83-153 27-103 (192)
138 cd01080 NAD_bind_m-THF_DH_Cycl 40.4 2.1E+02 0.0045 26.1 8.8 76 297-389 40-116 (168)
139 PRK07631 amidophosphoribosyltr 40.3 1.2E+02 0.0025 32.5 8.2 88 86-176 284-385 (475)
140 PRK06781 amidophosphoribosyltr 39.8 1.1E+02 0.0023 32.8 7.8 88 86-176 284-385 (471)
141 cd05008 SIS_GlmS_GlmD_1 SIS (S 39.5 99 0.0021 25.6 6.2 79 88-174 2-80 (126)
142 COG0856 Orotate phosphoribosyl 39.4 1E+02 0.0022 28.9 6.5 77 94-174 95-176 (203)
143 PLN02501 digalactosyldiacylgly 37.7 2E+02 0.0044 32.6 9.7 65 137-203 322-396 (794)
144 PF01380 SIS: SIS domain SIS d 37.5 35 0.00077 28.3 3.2 82 84-171 4-85 (131)
145 PF02875 Mur_ligase_C: Mur lig 36.9 1.8E+02 0.0038 23.0 7.0 34 303-336 13-47 (91)
146 PRK07322 adenine phosphoribosy 36.5 3.3E+02 0.0072 24.7 10.0 92 87-182 54-162 (178)
147 PLN02962 hydroxyacylglutathion 34.7 1.4E+02 0.0031 28.9 7.3 50 299-351 33-83 (251)
148 TIGR00640 acid_CoA_mut_C methy 34.4 83 0.0018 27.5 5.1 59 303-369 55-114 (132)
149 PRK11595 DNA utilization prote 34.1 1.5E+02 0.0032 28.1 7.1 75 96-173 134-221 (227)
150 PF08410 DUF1737: Domain of un 33.7 1.4E+02 0.0031 22.4 5.4 38 86-123 4-42 (54)
151 PRK13809 orotate phosphoribosy 33.7 1.9E+02 0.0041 27.3 7.7 71 95-170 77-149 (206)
152 cd05014 SIS_Kpsf KpsF-like pro 33.4 2E+02 0.0043 23.8 7.1 78 87-171 2-79 (128)
153 cd01523 RHOD_Lact_B Member of 32.7 73 0.0016 25.4 4.2 31 300-334 60-90 (100)
154 COG2185 Sbm Methylmalonyl-CoA 32.4 99 0.0022 27.8 5.2 46 316-369 79-124 (143)
155 cd04814 PA_M28_1 PA_M28_1: Pro 31.6 96 0.0021 27.7 5.0 41 296-336 43-97 (142)
156 cd01518 RHOD_YceA Member of th 31.0 88 0.0019 25.1 4.4 33 300-335 60-92 (101)
157 cd04820 PA_M28_1_1 PA_M28_1_1: 30.0 1E+02 0.0022 27.3 4.9 41 296-336 45-93 (137)
158 PRK07847 amidophosphoribosyltr 29.4 2.3E+02 0.0049 30.7 8.3 86 88-176 305-404 (510)
159 cd01528 RHOD_2 Member of the R 29.0 1E+02 0.0022 24.7 4.4 33 300-335 57-89 (101)
160 cd01519 RHOD_HSP67B2 Member of 28.8 92 0.002 24.9 4.2 33 300-335 65-97 (106)
161 PRK08558 adenine phosphoribosy 28.7 3.7E+02 0.008 25.9 8.9 81 87-170 113-207 (238)
162 KOG0814 Glyoxylase [General fu 28.6 69 0.0015 30.1 3.6 44 293-339 23-66 (237)
163 PF10662 PduV-EutP: Ethanolami 28.6 91 0.002 27.9 4.3 40 309-351 100-139 (143)
164 cd01532 4RHOD_Repeat_1 Member 27.8 93 0.002 24.7 4.0 33 300-335 49-83 (92)
165 PRK06388 amidophosphoribosyltr 27.4 2.5E+02 0.0054 30.0 8.1 87 87-176 293-393 (474)
166 cd01527 RHOD_YgaP Member of th 25.3 1.1E+02 0.0023 24.3 3.9 33 300-335 53-85 (99)
167 PRK00676 hemA glutamyl-tRNA re 24.9 1.3E+02 0.0028 30.8 5.2 37 296-336 169-205 (338)
168 PF04015 DUF362: Domain of unk 24.2 2.3E+02 0.0049 26.0 6.4 83 310-395 18-104 (206)
169 PRK12769 putative oxidoreducta 24.1 2.5E+02 0.0053 30.9 7.6 37 299-339 466-502 (654)
170 PRK15482 transcriptional regul 23.9 1.3E+02 0.0029 29.1 5.0 80 84-170 134-213 (285)
171 cd01524 RHOD_Pyr_redox Member 23.8 1.4E+02 0.0031 23.3 4.3 31 301-335 51-81 (90)
172 TIGR02990 ectoine_eutA ectoine 23.3 46 0.00099 32.2 1.6 24 156-179 109-132 (239)
173 TIGR01809 Shik-DH-AROM shikima 23.2 1.5E+02 0.0032 29.1 5.2 35 298-336 122-156 (282)
174 PRK11070 ssDNA exonuclease Rec 23.1 3.5E+02 0.0075 29.7 8.4 69 136-219 68-136 (575)
175 PRK10997 yieM hypothetical pro 23.0 3E+02 0.0064 29.7 7.7 59 299-369 415-475 (487)
176 cd03412 CbiK_N Anaerobic cobal 23.0 1.3E+02 0.0028 26.0 4.2 54 315-370 56-109 (127)
177 cd01525 RHOD_Kc Member of the 22.5 1.5E+02 0.0033 23.6 4.4 33 300-335 64-96 (105)
178 cd05009 SIS_GlmS_GlmD_2 SIS (S 22.5 2.3E+02 0.005 24.0 5.7 85 85-175 13-97 (153)
179 TIGR01744 XPRTase xanthine pho 21.6 6.5E+02 0.014 23.3 9.2 79 87-168 52-146 (191)
180 PRK05320 rhodanese superfamily 21.4 1.5E+02 0.0033 28.8 4.8 34 299-335 173-206 (257)
181 COG0784 CheY FOG: CheY-like re 21.3 3.4E+02 0.0074 21.7 6.4 44 299-351 3-48 (130)
182 cd01447 Polysulfide_ST Polysul 21.2 1.1E+02 0.0023 24.2 3.2 33 300-335 60-92 (103)
183 cd05013 SIS_RpiR RpiR-like pro 21.0 2E+02 0.0042 23.7 4.9 83 85-175 13-95 (139)
184 cd05710 SIS_1 A subgroup of th 21.0 2.1E+02 0.0047 23.9 5.1 81 88-175 2-82 (120)
185 COG0034 PurF Glutamine phospho 20.8 4.5E+02 0.0098 28.1 8.3 154 53-221 247-430 (470)
186 PRK13810 orotate phosphoribosy 20.7 4.9E+02 0.011 24.1 7.8 79 93-178 81-160 (187)
187 TIGR00393 kpsF KpsF/GutQ famil 20.6 2.9E+02 0.0062 26.2 6.5 79 87-172 2-80 (268)
188 PLN02160 thiosulfate sulfurtra 20.5 1.5E+02 0.0033 25.7 4.2 33 300-335 80-112 (136)
189 PF02225 PA: PA domain; Inter 20.4 2.2E+02 0.0047 22.5 4.8 36 296-336 29-65 (101)
190 cd01453 vWA_transcription_fact 20.1 3.3E+02 0.0072 24.7 6.5 60 301-369 108-168 (183)
No 1
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-78 Score=592.84 Aligned_cols=294 Identities=29% Similarity=0.440 Sum_probs=266.8
Q ss_pred CCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC--hhHHHHHHHHHHc
Q 015926 85 MKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVIYAL 162 (398)
Q Consensus 85 ~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p--d~lmELll~i~al 162 (398)
++++++|+|+++++||++||+.| |+++++++.++|||||.+|+|+ |+|||+||||+||+++| |+|||||+|+|||
T Consensus 2 ~~~~~if~g~s~~~La~~ia~~l-~~~l~~~~~~rF~DGE~~V~i~--EsVrg~dVfI~qs~~~pvnd~lmELLi~idA~ 78 (314)
T COG0462 2 MNNMKIFSGSSNPELAEKIAKRL-GIPLGKVEVKRFPDGEIYVRIE--ESVRGKDVFIIQSTSPPVNDNLMELLIMIDAL 78 (314)
T ss_pred CCceEEEECCCCHHHHHHHHHHh-CCCcccceeEEcCCCcEEEEec--ccccCCeEEEEeCCCCCcCHHHHHHHHHHHHH
Confidence 57899999999999999999999 6999999999999999888775 99999999999999996 6799999999999
Q ss_pred cccCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHH
Q 015926 163 PKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPL 242 (398)
Q Consensus 163 r~~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~l 242 (398)
|++||++||+|+|||||+||||++++|||++||++|+||+ .+|+|+|+|||||++|++|||+.++. ++.+.+.
T Consensus 79 k~asA~~It~ViPY~gYARQDk~~~~repIsaklvA~lL~-----~aG~drv~TvDlH~~qiqgfFdipvd--nl~a~p~ 151 (314)
T COG0462 79 KRASAKRITAVIPYFGYARQDKAFKPREPISAKLVANLLE-----TAGADRVLTVDLHAPQIQGFFDIPVD--NLYAAPL 151 (314)
T ss_pred HhcCCceEEEEeecchhhccCcccCCCCCEeHHHHHHHHH-----HcCCCeEEEEcCCchhhcccCCCccc--cccchHH
Confidence 9999999999999999999998889999999999999999 46999999999999999999994332 3358999
Q ss_pred HHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEc-CCc-cEEEEeeCCCCCCEEEEEeccccchHhHH
Q 015926 243 LLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRD-GNQ-RIVRIKEGDPRGRHIVIVDDLVQSGGTLI 318 (398)
Q Consensus 243 La~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~-~~~-~~~~~~~g~v~gk~viIVDDii~TG~Tl~ 318 (398)
+++|+.+..+.++++||+||.||++|++.+++ +.++++++|+|. ... .....+.||++||+|+||||||+||||+.
T Consensus 152 l~~~~~~~~~~~d~vVVSPD~Ggv~RAr~~A~~L~~~~a~i~K~R~~~~~~v~~~~~~gdV~gk~~iiVDDiIdTgGTi~ 231 (314)
T COG0462 152 LAEYIREKYDLDDPVVVSPDKGGVKRARALADRLGAPLAIIDKRRDSSPNVVEVMNLIGDVEGKDVVIVDDIIDTGGTIA 231 (314)
T ss_pred HHHHHHHhcCCCCcEEECCCccHHHHHHHHHHHhCCCEEEEEEeecCCCCeEEEeecccccCCCEEEEEeccccccHHHH
Confidence 99999987555678999999999999998875 567899999994 433 33456789999999999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhcc
Q 015926 319 ECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 397 (398)
Q Consensus 319 ~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I~ 397 (398)
+|++.|+++||++|+++||||+|++++.++++++ .+++|++|||||+++ ..+++|+++||++++|||+|.
T Consensus 232 ~Aa~~Lk~~GAk~V~a~~tH~vfs~~a~~~l~~~-------~i~~vivTnTi~~~~--~~~~~~~~~isva~liaeaI~ 301 (314)
T COG0462 232 KAAKALKERGAKKVYAAATHGVFSGAALERLEAS-------AIDEVIVTDTIPLPE--KKKIPKVSVISVAPLIAEAIR 301 (314)
T ss_pred HHHHHHHHCCCCeEEEEEEchhhChHHHHHHhcC-------CCCEEEEeCCccccc--ccccCceEEEEhHHHHHHHHH
Confidence 9999999999999999999999999999999875 599999999999972 345779999999999999984
No 2
>PLN02297 ribose-phosphate pyrophosphokinase
Probab=100.00 E-value=3.5e-77 Score=591.13 Aligned_cols=319 Identities=82% Similarity=1.325 Sum_probs=286.0
Q ss_pred cccccCCCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHH
Q 015926 79 ESASRTMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSV 158 (398)
Q Consensus 79 ~~~~~~~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~ 158 (398)
.|..|..++++||+|+++++||++||+.++|++++.+++++|||||.+++++.+++|||+|||||||+++|+++||||++
T Consensus 8 ~~~~~~~~~~~i~~g~~~~~LA~~ia~~l~g~~l~~~~~~~FpDGE~~v~v~~~~~vrg~~V~ivqs~~~pd~lmELLl~ 87 (326)
T PLN02297 8 ASSKKNKKQVHLFYCEETEELARKIAAESDAIELGSINWRKFPDGFPNLFINNAHGIRGQHVAFLASFSSPAVIFEQLSV 87 (326)
T ss_pred hcccccCCCeEEEECCCCHHHHHHHHHHhCCCceeeeEEEECCCCCEEEEEcCCCCcCCCeEEEECCCCCChHHHHHHHH
Confidence 34556678899999999999999999986469999999999999999999998899999999999999999999999999
Q ss_pred HHHccccCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccc
Q 015926 159 IYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFES 238 (398)
Q Consensus 159 i~alr~~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~ 238 (398)
++|||++||++|++|+|||||+||||++++|||++++++|+||++++..++|+|+|++||+|+.|.+|||+.++.+++++
T Consensus 88 ~dAlr~~ga~~i~~ViPY~~YaRQDr~~~~ge~isak~vA~ll~~~~~~~~g~d~vitvDlH~~~~~~fF~~~~~~l~l~ 167 (326)
T PLN02297 88 IYALPKLFVASFTLVLPFFPTGTSERVEREGDVATAFTLARILSNIPISRGGPTSLVIFDIHALQERFYFGDNVLPCFES 167 (326)
T ss_pred HHHHHHcCCCEEEEEeeCChhhcCCCCCCCCCCchHHHHHHHHhcccccccCCCEEEEEeCCChHHCCccCCcccchhhc
Confidence 99999999999999999999999999999999999999999999755433699999999999999999999777555567
Q ss_pred hHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhcCCCeEEEEEEEcCCccEEEEeeCCCCCCEEEEEeccccchHhHH
Q 015926 239 AIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLI 318 (398)
Q Consensus 239 a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~~~~~~v~~K~R~~~~~~~~~~~g~v~gk~viIVDDii~TG~Tl~ 318 (398)
+.+.+++||.+..+.++++||+||.|+++|++..+.+.++++++|+|.+.........++++||+|+|||||+|||+|+.
T Consensus 168 a~~~l~~~i~~~~~~~~~vvVsPD~Ga~~ra~~~a~~~~~~~~~K~R~g~~~~~~~~~~dv~gr~vlIVDDIidTG~Tl~ 247 (326)
T PLN02297 168 GIPLLKKRLQQLPDSDNIVIAFPDDGAWKRFHKQFEHFPMVVCTKVREGDKRIVRIKEGNPAGRHVVIVDDLVQSGGTLI 247 (326)
T ss_pred cHHHHHHHHHhccccCCcEEEecCccHHHHHHHHcCCCCEEEEEeEECCCceEEEecccccCCCeEEEEecccCcHHHHH
Confidence 89999999976423578899999999999998888678999999999876544445678999999999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhccC
Q 015926 319 ECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQI 398 (398)
Q Consensus 319 ~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I~~ 398 (398)
++++.|++.||++|+++||||+|+++|+++|.++ .|.|++|+++||+|||||++.+....++|+++||++++||++|+|
T Consensus 248 ~aa~~L~~~Ga~~V~~~~THglfs~~a~~~l~~~-~~~~~~~i~~iv~TdTip~~~~~~~~~~k~~~isva~llAe~i~~ 326 (326)
T PLN02297 248 ECQKVLAAHGAAKVSAYVTHGVFPNESWERFTHD-NGGPEAGFAYFWITDSCPQTVKAVRGKAPFEVLSLAGSIADALQI 326 (326)
T ss_pred HHHHHHHHCCCcEEEEEEECcccChhHHHHHHhc-ccccccCcCEEEEcCCccCChhhcccCCCcEEEEcHHHHHHHhcC
Confidence 9999999999999999999999999999999875 345566899999999999875322345799999999999999986
No 3
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=7e-72 Score=553.61 Aligned_cols=296 Identities=25% Similarity=0.356 Sum_probs=263.7
Q ss_pred CCCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC--hhHHHHHHHHHH
Q 015926 84 TMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVIYA 161 (398)
Q Consensus 84 ~~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p--d~lmELll~i~a 161 (398)
..++++||+|+++++||++||+.| |++++.+++++|||||.++++. ++|||+||||+||++.| |++||||++++|
T Consensus 3 ~~~~~~i~~g~~~~~La~~ia~~l-g~~l~~~~~~~FpdGE~~v~i~--~~v~g~~V~iiqs~~~p~nd~lmeLl~~~~a 79 (319)
T PRK04923 3 DQRNLLVFSGNANKPLAQSICKEL-GVRMGKALVTRFSDGEVQVEIE--ESVRRQEVFVIQPTCAPSAENLMELLVLIDA 79 (319)
T ss_pred CCCceEEEECCCCHHHHHHHHHHh-CCceeeeEEEECCCCCEEEEEC--CCcCCCeEEEEecCCCCCchHHHHHHHHHHH
Confidence 467899999999999999999999 6999999999999999888885 89999999999999876 579999999999
Q ss_pred ccccCccceEEeeccCCCCCccccccC-CCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchH
Q 015926 162 LPKLFVSSFTLVLPFFPTGTSERMEDE-GDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAI 240 (398)
Q Consensus 162 lr~~gA~~ItaViPY~~YsRQDr~~~~-ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~ 240 (398)
||++||++|++|+|||||+||||++.+ |+|++++.+|+||+. +|+|+|++||+|+.+.++||+.++. ++++.
T Consensus 80 lr~~~a~~i~~ViPYl~YaRQDr~~~~~~~~isak~va~ll~~-----~g~d~vitvD~H~~~~~~~f~~p~~--~l~~~ 152 (319)
T PRK04923 80 LKRASAASVTAVIPYFGYSRQDRRMRSSRVPITAKVAAKMISA-----MGADRVLTVDLHADQIQGFFDVPVD--NVYAS 152 (319)
T ss_pred HHHcCCcEEEEEeeccccccccccccCCCCCccHHHHHHHHHh-----cCCCEEEEEeCChHHHHhhcCCCce--eeeCh
Confidence 999999999999999999999999954 679999999999984 5899999999999999999984332 34688
Q ss_pred HHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--C-CCeEEEEEEEcCCc-cEEEEeeCCCCCCEEEEEeccccchHh
Q 015926 241 PLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--H-FPMIVCNKVRDGNQ-RIVRIKEGDPRGRHIVIVDDLVQSGGT 316 (398)
Q Consensus 241 ~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~-~~~~v~~K~R~~~~-~~~~~~~g~v~gk~viIVDDii~TG~T 316 (398)
+++++||.+..+.++++||+||.|+++|+..+++ + .++++++|+|.... .......++++||+|+|||||+|||+|
T Consensus 153 ~~l~~~i~~~~~~~~~vVVsPD~Ga~~rA~~lA~~L~~~~~~~~~K~R~~~~~~~~~~~~gdv~Gr~viIVDDIidTG~T 232 (319)
T PRK04923 153 PLLLADIWRAYGTDNLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPRANVATVMNIIGDVQGKTCVLVDDLVDTAGT 232 (319)
T ss_pred HHHHHHHHHhcCCCCCEEEEECCchHHHHHHHHHHcCCCCEEEeccccCCCCceEEEecccCCCCCEEEEEecccCchHH
Confidence 9999999664445788999999999999987765 2 57889999997543 223445789999999999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhc
Q 015926 317 LIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASAL 396 (398)
Q Consensus 317 l~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I 396 (398)
|.++++.|+++||++|+++||||+|+++|+++|.++ |+++||+|||||++. ..+.++|++++||+++||++|
T Consensus 233 l~~aa~~Lk~~GA~~V~~~~THgvfs~~a~~~l~~s-------~i~~iv~Tdtip~~~-~~~~~~k~~~isva~lla~~i 304 (319)
T PRK04923 233 LCAAAAALKQRGALKVVAYITHPVLSGPAVDNINNS-------QLDELVVTDTIPLSE-AARACAKIRQLSVAELLAETI 304 (319)
T ss_pred HHHHHHHHHHCCCCEEEEEEECcccCchHHHHHhhC-------CCCEEEEeCCccCch-hhcccCCeEEEEhHHHHHHHH
Confidence 999999999999999999999999999999999875 799999999999864 224568999999999999998
Q ss_pred c
Q 015926 397 Q 397 (398)
Q Consensus 397 ~ 397 (398)
+
T Consensus 305 ~ 305 (319)
T PRK04923 305 R 305 (319)
T ss_pred H
Confidence 4
No 4
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=100.00 E-value=9.5e-72 Score=567.62 Aligned_cols=300 Identities=24% Similarity=0.326 Sum_probs=266.0
Q ss_pred cccCCCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC--hhHHHHHHH
Q 015926 81 ASRTMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSV 158 (398)
Q Consensus 81 ~~~~~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p--d~lmELll~ 158 (398)
-.|++++++||+|+++++||++||+.| |++++.+++++|||||.++++. ++|||+|||||||+++| |++||||++
T Consensus 113 ~~~~~~~m~I~sgs~~~~LA~~IA~~L-g~~l~~~~~~rFpDGE~~Vri~--e~VrG~dV~IVqS~~~pvNd~LmELLll 189 (439)
T PTZ00145 113 FEKKMENAILFSGSSNPLLSKNIADHL-GTILGRVHLKRFADGEVSMQFL--ESIRGKDVYIIQPTCPPVNENLIELLLM 189 (439)
T ss_pred hhhccCCeEEEECCCCHHHHHHHHHHh-CCCceeeEEEECCCCCEEEEEC--CCcCCCeEEEEecCCCCCcHHHHHHHHH
Confidence 444678899999999999999999999 6999999999999999888885 89999999999999877 569999999
Q ss_pred HHHccccCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccc
Q 015926 159 IYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFES 238 (398)
Q Consensus 159 i~alr~~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~ 238 (398)
++|||++||++|++|+|||||+||||++.+|+|++++++|+||+. +|+|+|||||+|+.|++|||+.++...++.
T Consensus 190 idAlr~agAkrItlViPYl~YaRQDR~~~~gepIsak~vA~lL~~-----~G~d~VitvDlHs~~i~~fF~~~iPvdnl~ 264 (439)
T PTZ00145 190 ISTCRRASAKKITAVIPYYGYARQDRKLSSRVPISAADVARMIEA-----MGVDRVVAIDLHSGQIQGFFGPRVPVDNLE 264 (439)
T ss_pred HHHHHHhccCeEEEEeecccchheecccCCCCChhHHHHHHHHHH-----cCCCeEEEEecChHHHHhhcCCCccccccc
Confidence 999999999999999999999999999999999999999999984 589999999999999999996222112346
Q ss_pred hHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--C------CCeEEEEEEEcCCccE-EEEeeCCCCCCEEEEEec
Q 015926 239 AIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--H------FPMIVCNKVRDGNQRI-VRIKEGDPRGRHIVIVDD 309 (398)
Q Consensus 239 a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~------~~~~v~~K~R~~~~~~-~~~~~g~v~gk~viIVDD 309 (398)
+.+.+++|+.+. +..++|||+||.|+.+|++.++. + .+++++.|+|...... ...+.|+++||+||||||
T Consensus 265 a~~~~a~~i~~~-~l~~pVVVsPD~Ga~~RAr~~A~~L~~~~~~~~~~avl~K~R~~~~~v~~~~lvgdV~Gk~vIIVDD 343 (439)
T PTZ00145 265 AQLIGLDYFTKK-DLYKPVIVSPDAGGVYRARKFQDGLNHRGISDCGIAMLIKQRTKPNEIEKMDLVGNVYDSDVIIVDD 343 (439)
T ss_pred ccHHHHHHHhhc-CCCccEEEccCcchHHHHHHHHHHhccccccCCCEEEEEeecCCCCceEEEeccCCCCCCEEEEEcc
Confidence 788999999764 45788999999999999886653 1 4788999999765442 334579999999999999
Q ss_pred cccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEech
Q 015926 310 LVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLA 389 (398)
Q Consensus 310 ii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva 389 (398)
|||||+|+.++++.|+++||++|+++||||+|+++|+++|.++ |+++||+|||||+++ ..+.++|+++|||+
T Consensus 344 IIdTG~Tl~~aa~~Lk~~GA~~V~~~~THglfs~~A~~rl~~s-------~i~~IvvTdTIp~~~-~~~~~~k~~visVA 415 (439)
T PTZ00145 344 MIDTSGTLCEAAKQLKKHGARRVFAFATHGLFSGPAIERIEAS-------PLEEVVVTDTVKSNK-NIDSCKKITKLSVS 415 (439)
T ss_pred eeCcHHHHHHHHHHHHHcCCCEEEEEEEcccCChhHHHHHhcC-------CCCEEEEeCCCcCch-hhcccCCeEEEEhH
Confidence 9999999999999999999999999999999999999999875 799999999999864 33457899999999
Q ss_pred HHHHhhcc
Q 015926 390 GSIASALQ 397 (398)
Q Consensus 390 ~liAe~I~ 397 (398)
++||++|+
T Consensus 416 ~llAeaI~ 423 (439)
T PTZ00145 416 VLVADAIR 423 (439)
T ss_pred HHHHHHHH
Confidence 99999984
No 5
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=3.6e-71 Score=549.25 Aligned_cols=294 Identities=26% Similarity=0.392 Sum_probs=263.1
Q ss_pred CCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC--hhHHHHHHHHHHc
Q 015926 85 MKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVIYAL 162 (398)
Q Consensus 85 ~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p--d~lmELll~i~al 162 (398)
-++++||+|+++++||++||++| |++++.+++++|||||.++++. ++|||+||||+||+++| |++||||++++||
T Consensus 3 ~~~~~i~~~~~~~~la~~ia~~l-g~~l~~~~~~~FpdGE~~v~i~--~~vrg~dV~iv~s~~~~~nd~lmelll~~~al 79 (320)
T PRK02269 3 YSDLKLFALSSNKELAEKVAQEI-GIELGKSSVRQFSDGEIQVNIE--ESIRGHHVFILQSTSSPVNDNLMEILIMVDAL 79 (320)
T ss_pred CCCeEEEECCCCHHHHHHHHHHh-CCceeeeEEEECCCCCEEEEEC--CCCCCCEEEEEecCCCCccchHHHHHHHHHHH
Confidence 35799999999999999999999 6999999999999999888886 89999999999999875 5799999999999
Q ss_pred cccCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHH
Q 015926 163 PKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPL 242 (398)
Q Consensus 163 r~~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~l 242 (398)
|++||++|++|+|||||+||||++++|+|++++.+|+||+. +|+|+|+++|+|+.+.++||+.++. ++.+.++
T Consensus 80 r~~~a~~i~~V~PYl~YaRQDr~~~~~e~isak~~a~ll~~-----~g~d~vit~D~H~~~~~~~f~~p~~--~l~~~p~ 152 (320)
T PRK02269 80 KRASAESINVVMPYYGYARQDRKARSREPITSKLVANMLEV-----AGVDRLLTVDLHAAQIQGFFDIPVD--HLMGAPL 152 (320)
T ss_pred HHhCCCeEEEEEeccccchhhcccCCCCCchHHHHHHHHhh-----cCCCEEEEECCChHHHhccccCCch--hhhhHHH
Confidence 99999999999999999999999999999999999999984 5899999999999999999984332 3468999
Q ss_pred HHHHHHhC-CCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCC---ccEEEEeeCCCCCCEEEEEeccccchHh
Q 015926 243 LLNRLQQL-PDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGN---QRIVRIKEGDPRGRHIVIVDDLVQSGGT 316 (398)
Q Consensus 243 La~~L~~~-~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~---~~~~~~~~g~v~gk~viIVDDii~TG~T 316 (398)
+++|+.+. ++.++++||+||.|+++|++.+++ +.++.+++|+|... ........++++||+|+|||||+|||+|
T Consensus 153 l~~~i~~~~~~~~~~vvVsPd~G~~~~A~~lA~~lg~~~~~~~k~r~~~~~~~~~~~~~~gdv~Gr~viIVDDIidTG~T 232 (320)
T PRK02269 153 IADYFDRRGLVGDDVVVVSPDHGGVTRARKLAQFLKTPIAIIDKRRSVDKMNTSEVMNIIGNVKGKKCILIDDMIDTAGT 232 (320)
T ss_pred HHHHHHHhCCCCCCcEEEEECccHHHHHHHHHHHhCCCEEEEEecccCCCCceeEEEEeccccCCCEEEEEeeecCcHHH
Confidence 99999764 345778999999999999998775 56788888888632 2223345789999999999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhc
Q 015926 317 LIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASAL 396 (398)
Q Consensus 317 l~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I 396 (398)
+.++++.|+++||++|+++||||+|+++|+++|.++ |+++||+|||||++.+ ..++|+++|||+++||++|
T Consensus 233 l~~aa~~Lk~~GA~~V~~~~tHglf~~~a~~~l~~~-------~i~~iv~Tdti~~~~~--~~~~k~~~isva~~la~~i 303 (320)
T PRK02269 233 ICHAADALAEAGATEVYASCTHPVLSGPALDNIQKS-------AIEKLVVLDTIYLPEE--RLIDKIEQISIADLLGEAI 303 (320)
T ss_pred HHHHHHHHHHCCCCEEEEEEECcccCchHHHHHHhC-------CCCEEEEeCCCCCccc--cccCCeEEEEhHHHHHHHH
Confidence 999999999999999999999999999999999875 7999999999998653 3468999999999999998
Q ss_pred c
Q 015926 397 Q 397 (398)
Q Consensus 397 ~ 397 (398)
+
T Consensus 304 ~ 304 (320)
T PRK02269 304 I 304 (320)
T ss_pred H
Confidence 4
No 6
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=1.4e-70 Score=546.92 Aligned_cols=301 Identities=24% Similarity=0.374 Sum_probs=266.2
Q ss_pred ccCCCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC--hhHHHHHHHH
Q 015926 82 SRTMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVI 159 (398)
Q Consensus 82 ~~~~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p--d~lmELll~i 159 (398)
+...++++||+|+++++||++||+.| |++++++++++|||||.++++. ++|||+||||+||+++| |++||||+++
T Consensus 4 ~~~~~~~~i~~~~~~~~La~~ia~~l-g~~l~~~~~~~FpdGE~~v~i~--~~vrg~dV~ivqs~~~p~nd~l~eLll~~ 80 (332)
T PRK00553 4 SIDKSNHVIFSLSKAKKLVDSICRKL-SMKPGEIVIQKFADGETYIRFD--ESVRNKDVVIFQSTCSPVNDSLMELLIAI 80 (332)
T ss_pred ccCCCCeEEEECCCCHHHHHHHHHHh-CCceeeeEEEECCCCCEEEEEC--CCCCCCEEEEEcCCCCCCchHHHHHHHHH
Confidence 45678899999999999999999999 6999999999999999888775 89999999999999876 5799999999
Q ss_pred HHccccCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccch
Q 015926 160 YALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESA 239 (398)
Q Consensus 160 ~alr~~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a 239 (398)
+|||++||++|++|+|||||+||||++.+|++++++++|+||+. +|+|+|++||+|+.+.+|||+.++. ++.+
T Consensus 81 ~alr~~~a~~i~~ViPYl~YaRQDr~~~~~e~isak~vA~ll~~-----~g~d~vit~DlH~~~i~~~F~ipv~--~l~a 153 (332)
T PRK00553 81 DALKRGSAKSITAILPYYGYARQDRKTAGREPITSKLVADLLTK-----AGVTRVTLTDIHSDQTQGFFDIPVD--ILRT 153 (332)
T ss_pred HHHHHcCCCeEEEEeeccccchhhcccCCCCCccHHHHHHHHHh-----cCCCEEEEEeCChHHHHhhcCCCcc--eeec
Confidence 99999999999999999999999999999999999999999984 5899999999999999999984443 3467
Q ss_pred HHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCcc-EEEEeeCCCCCCEEEEEeccccchHh
Q 015926 240 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQR-IVRIKEGDPRGRHIVIVDDLVQSGGT 316 (398)
Q Consensus 240 ~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~~-~~~~~~g~v~gk~viIVDDii~TG~T 316 (398)
.+++++|+.+..+.++++||+||.|+++|++.+++ +.++.+++|+|..... ......++++||+|+|||||+|||+|
T Consensus 154 ~~~~~~~~~~~~~~~~~vvVsPD~gg~~rA~~lA~~lg~~~~vi~K~r~~~~~~~~~~~~gdv~Gk~VIIVDDIi~TG~T 233 (332)
T PRK00553 154 YHVFLSRVLELLGKKDLVVVSPDYGGVKRARLIAESLELPLAIIDKRRPKHNVAESINVLGEVKNKNCLIVDDMIDTGGT 233 (332)
T ss_pred hHHHHHHHHHhcCCCCeEEEEECCCcHHHHHHHHHHhCCCEEEEEEecCCcceEeeEEeeccCCCCEEEEEeccccchHH
Confidence 89999999764345788999999999999987764 5688889999875432 23335789999999999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhc
Q 015926 317 LIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASAL 396 (398)
Q Consensus 317 l~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I 396 (398)
+.++++.|+++||++|+++||||+|+++|.++|.++. -++++++||+|||||++. ..+++|+++|||+++||++|
T Consensus 234 l~~aa~~Lk~~GA~~V~~~atHglf~~~a~~~l~~~~---~~~~i~~iv~Tntip~~~--~~~~~~~~~vsva~~la~~i 308 (332)
T PRK00553 234 VIAAAKLLKKQKAKKVCVMATHGLFNKNAIQLFDEAF---KKKLIDKLFVSNSIPQTK--FEKKPQFKVVDLAHLYEEVL 308 (332)
T ss_pred HHHHHHHHHHcCCcEEEEEEEeeecCchHHHHHHhcc---ccCCCCEEEEeCCccCcc--cccCCCeEEEEhHHHHHHHH
Confidence 9999999999999999999999999999999997530 013699999999999864 23468999999999999998
Q ss_pred c
Q 015926 397 Q 397 (398)
Q Consensus 397 ~ 397 (398)
+
T Consensus 309 ~ 309 (332)
T PRK00553 309 L 309 (332)
T ss_pred H
Confidence 4
No 7
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=2.8e-70 Score=543.17 Aligned_cols=294 Identities=23% Similarity=0.383 Sum_probs=261.8
Q ss_pred CCCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC--hhHHHHHHHHHH
Q 015926 84 TMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVIYA 161 (398)
Q Consensus 84 ~~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p--d~lmELll~i~a 161 (398)
.+++++||+|+++++||++||+.| |++++++++++|||||.++++. ++|||+||+||||++.| +++||||++++|
T Consensus 6 ~~~~~~i~~~~~~~~la~~ia~~l-g~~l~~~~~~~FpdGE~~v~i~--~~v~g~dV~ii~s~~~~~nd~l~eLll~~~a 82 (323)
T PRK02458 6 ADKQIKLFSLNSNLEIAEKIAQAA-GVPLGKLSSRQFSDGEIMINIE--ESVRGDDIYIIQSTSFPVNDHLWELLIMIDA 82 (323)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHh-CCceeeeEEEECCCCCEEEEec--CCcCCCeEEEEecCCCCCchHHHHHHHHHHH
Confidence 356799999999999999999999 6999999999999999888875 89999999999999876 579999999999
Q ss_pred ccccCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHH
Q 015926 162 LPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIP 241 (398)
Q Consensus 162 lr~~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~ 241 (398)
||++||++|++|+|||||+||||++++|++++++.+|+||+. +|+|+|++||+|+.+.++||+.++. ++.+.+
T Consensus 83 lr~~~a~~i~lViPYl~YaRQDr~~~~ge~isak~~a~lL~~-----~g~d~vitvD~H~~~i~~~F~~p~~--nl~~~p 155 (323)
T PRK02458 83 CKRASANTVNVVLPYFGYARQDRIAKPREPITAKLVANMLVK-----AGVDRVLTLDLHAVQVQGFFDIPVD--NLFTVP 155 (323)
T ss_pred HHHcCCceEEEEEeccccchhhcccCCCCCchHHHHHHHHhh-----cCCCeEEEEecCcHHhhccccCCce--EEEEHH
Confidence 999999999999999999999999999999999999999984 5899999999999999999983332 346789
Q ss_pred HHHHHHHhC-CCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCccEEEEeeCCCCCCEEEEEeccccchHhHH
Q 015926 242 LLLNRLQQL-PDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLI 318 (398)
Q Consensus 242 lLa~~L~~~-~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~~~~~~~~g~v~gk~viIVDDii~TG~Tl~ 318 (398)
++++|+.+. ++.++++||+||.|+++||+.+++ +.++.+++|.|...........++++||+|+|||||+|||+|+.
T Consensus 156 ~~~~~l~~~~~~~~~~vvV~pd~Ga~~~A~~la~~L~~~~~~~~~~r~~~~~~~~~i~gdV~gk~viIVDDIidTG~Tl~ 235 (323)
T PRK02458 156 LFAKHYCKKGLSGSDVVVVSPKNSGIKRARSLAEYLDAPIAIIDYAQDDSEREEGYIIGDVAGKKAILIDDILNTGKTFA 235 (323)
T ss_pred HHHHHHHHhCCCCCceEEEEECCChHHHHHHHHHHhCCCEEEEEEecCCCcceeeccccccCCCEEEEEcceeCcHHHHH
Confidence 999999764 344788999999999999988775 56777778777543322233578999999999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhcc
Q 015926 319 ECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 397 (398)
Q Consensus 319 ~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I~ 397 (398)
++++.|+++||++|+++||||+|+++|.++|.++ |+++||+|||||++. ..++|+++||++++||++|+
T Consensus 236 ~aa~~Lk~~GA~~V~~~~tHgif~~~a~~~l~~s-------~i~~iv~TdTi~~~~---~~~~k~~~isva~lla~~i~ 304 (323)
T PRK02458 236 EAAKIVEREGATEIYAVASHGLFAGGAAEVLENA-------PIKEILVTDSVATKE---RVPKNVTYLSASELIADAII 304 (323)
T ss_pred HHHHHHHhCCCCcEEEEEEChhcCchHHHHHhhC-------CCCEEEEECCcCCch---hcCCCcEEEEhHHHHHHHHH
Confidence 9999999999999999999999999999999986 799999999999853 23679999999999999984
No 8
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional
Probab=100.00 E-value=9e-69 Score=528.06 Aligned_cols=282 Identities=26% Similarity=0.334 Sum_probs=251.6
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC-hhHHHHHHHHHHcccc
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP-GKIFEQLSVIYALPKL 165 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p-d~lmELll~i~alr~~ 165 (398)
+.+||+|+++++||++||+.| |++++++++++|||||.++++. ++|||+||||+||+++| +++||||++++|||++
T Consensus 2 ~~~i~~~~~~~~la~~ia~~l-g~~~~~~~~~~F~dGE~~v~i~--~~v~g~~V~ivqs~~~~n~~l~elll~~~alr~~ 78 (301)
T PRK07199 2 QPLLLALPGNEAAAGRLAAAL-GVEVGRIELHRFPDGESYVRLD--SPVAGRTVVLVCSLDRPDEKLLPLLFAAEAAREL 78 (301)
T ss_pred ceEEEECCCCHHHHHHHHHHh-CCceeeeEEEECCCCCEEEEEC--CCCCCCEEEEECCCCCCcHHHHHHHHHHHHHHHc
Confidence 468999999999999999999 6999999999999999888885 89999999999999875 5699999999999999
Q ss_pred CccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCc---hhhhcccCCCCcccccchHHH
Q 015926 166 FVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHA---LQERFYFGDTILPCFESAIPL 242 (398)
Q Consensus 166 gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs---~q~~gfFn~~l~~~~~~a~~l 242 (398)
||++|++|+|||||+||||++++|||++++.+|+||+ +|+|+|+++|+|+ .+++|||+.+.. ++++.++
T Consensus 79 ~a~~i~~ViPY~~YaRqDr~~~~ge~isak~vA~ll~------~~~d~vit~DlH~~~~~~~~~~f~ip~~--nl~~~~~ 150 (301)
T PRK07199 79 GARRVGLVAPYLAYMRQDIAFHPGEAISQRHFARLLS------GSFDRLVTVDPHLHRYPSLSEVYPIPAV--VLSAAPA 150 (301)
T ss_pred CCCeEEEEeecccccccccccCCCCCccHHHHHHHHH------hhcCeEEEEeccchhhHHhcCcccCCcc--ccchHHH
Confidence 9999999999999999999999999999999999997 2799999999997 588999983332 3468899
Q ss_pred HHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCccEE--EEeeCCCCCCEEEEEeccccchHhHH
Q 015926 243 LLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQRIV--RIKEGDPRGRHIVIVDDLVQSGGTLI 318 (398)
Q Consensus 243 La~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~~~~--~~~~g~v~gk~viIVDDii~TG~Tl~ 318 (398)
+++||.+. .+++++|+||.|+.+|+..+++ +.++.+++|+|.+..... ....++++||+|+|||||+|||+|+.
T Consensus 151 la~~l~~~--~~~~vVVsPd~g~~~~a~~la~~l~~~~~~~~K~R~~~~~~~~~~~~~~~v~Gr~vIIVDDIidTG~Tl~ 228 (301)
T PRK07199 151 IAAWIRAH--VPRPLLIGPDEESEQWVAAVAERAGAPHAVLRKTRHGDRDVEISLPDAAPWAGRTPVLVDDIVSTGRTLI 228 (301)
T ss_pred HHHHHHhc--CCCcEEEEeCCChHHHHHHHHHHhCCCEEEEEEEecCCCeEEEEeccCcccCCCEEEEEecccCcHHHHH
Confidence 99999874 3678999999999999987664 567888999997654321 22245789999999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhcc
Q 015926 319 ECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 397 (398)
Q Consensus 319 ~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I~ 397 (398)
++++.|+++||++|+++||||+|+++|.++|.++ ++++|++|||||++. +++||+++||++|+
T Consensus 229 ~aa~~Lk~~GA~~V~~~~tHgvfs~~a~~~l~~~-------~i~~iv~Tdti~~~~---------~~~sva~lla~~i~ 291 (301)
T PRK07199 229 EAARQLRAAGAASPDCVVVHALFAGDAYSALAAA-------GIARVVSTDTVPHPS---------NAISLAPLLAEALR 291 (301)
T ss_pred HHHHHHHHCCCcEEEEEEEeeeCChHHHHHHHhC-------CCCEEEEeCCccCCC---------CEEehHHHHHHHHH
Confidence 9999999999999999999999999999999886 799999999999853 48999999999984
No 9
>KOG1448 consensus Ribose-phosphate pyrophosphokinase [Nucleotide transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-69 Score=517.19 Aligned_cols=294 Identities=31% Similarity=0.492 Sum_probs=264.1
Q ss_pred CCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC--hhHHHHHHHHHHc
Q 015926 85 MKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVIYAL 162 (398)
Q Consensus 85 ~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p--d~lmELll~i~al 162 (398)
+++++||+|.++++||++||++| |++++++.|+||+|||++|+++ ++|||+|||++||.+.| |+|||||+|++||
T Consensus 1 ~~~i~lf~g~shp~La~~I~~~l-gi~l~~v~~kkf~nge~~v~i~--esvR~~dV~iiqsgsg~ind~lmELLI~I~ac 77 (316)
T KOG1448|consen 1 MKNIKLFSGDSHPELAERIAARL-GIELGKVNLKKFSNGETSVQIG--ESVRGEDVYIIQSGSGPINDNLMELLIMINAC 77 (316)
T ss_pred CCceEEEcCCCCHHHHHHHHHHh-CCCcceeeeEEccCCcEEEecc--cccccCcEEEeccCCCcchHHHHHHHHHHHhc
Confidence 46899999999999999999999 5999999999999999777775 89999999999999998 7899999999999
Q ss_pred cccCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHH
Q 015926 163 PKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPL 242 (398)
Q Consensus 163 r~~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~l 242 (398)
++++|++||+|+|||||+||||+.+.+.+++||++|+||. .+|+|+|||+|+|..|++|||+.++.++ ++.+.
T Consensus 78 ~~asa~~vTaViP~Fpyarq~~k~~~r~~i~aklVanlls-----~aG~dhvItmDlHa~Q~qgfF~ipVdnl--y~~p~ 150 (316)
T KOG1448|consen 78 KRASASRVTAVIPYFPYARQDKKDKSRAPILAKLVANLLS-----SAGADHVITMDLHASQIQGFFDIPVDNL--YAEPA 150 (316)
T ss_pred chhhhheeEEeccCCccccchhhhhhhhhHHHHHHHhhhh-----ccCCceEEEecccchhhCceeeccchhh--ccchH
Confidence 9999999999999999999999999899999999999998 4699999999999999999999655533 47788
Q ss_pred HHHHHHh-CCCCCCeEEEeeCCCchhhHHHhhcCCCe--EEEEEEEcCCcc--EEEEeeCCCCCCEEEEEeccccchHhH
Q 015926 243 LLNRLQQ-LPDSDNISIAFPDDGAWKRFHKQLQHFPM--IVCNKVRDGNQR--IVRIKEGDPRGRHIVIVDDLVQSGGTL 317 (398)
Q Consensus 243 La~~L~~-~~~~~~~vVVaPD~Ga~~Ra~~~~~~~~~--~v~~K~R~~~~~--~~~~~~g~v~gk~viIVDDii~TG~Tl 317 (398)
+.+|++. ..++++.++|+||.|+++|++.+++.++. +.+.|+|++... ..+.++||++||.+||||||++|++|+
T Consensus 151 ~l~~ir~~~~~~~~~vivSPdaGgaKR~~s~ad~l~~~fali~ker~k~~~v~~~m~LVGDv~gkvailVDDm~dt~GTl 230 (316)
T KOG1448|consen 151 VLNYIRENIPDSENAVIVSPDAGGAKRVTSLADRLNLDFALIHKERRKANEVDIRMVLVGDVKGKVAILVDDMADTCGTL 230 (316)
T ss_pred HHHHHHhhCCCccceEEECCCcchhhhhHHHHHhhcchhhhhhhhhhcccccceEEEEEeccCCcEEEEecccccccchH
Confidence 8999987 45789999999999999999998877654 334566654422 255679999999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhcc
Q 015926 318 IECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 397 (398)
Q Consensus 318 ~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I~ 397 (398)
.++++.|.++||++||+++|||+|++++++++.++ .++++++|||+|++.+.. .+|+.+|++++.+||+|+
T Consensus 231 ~~aa~~L~~~GA~kV~a~~THgVfs~~a~er~~~s-------~~~~~vvtnt~p~~~~~~--~~~~~~Idvs~~~ae~ir 301 (316)
T KOG1448|consen 231 IKAADKLLEHGAKKVYAIVTHGVFSGPAIERLNES-------ALDRVVVTNTIPIDDSCL--EPKLTTIDVSPVLAEAIR 301 (316)
T ss_pred HHHHHHHHhcCCceEEEEEcceeccccHHHHhhhc-------ccceEEEEEeeccccccc--CCcccEEeeccccchheE
Confidence 99999999999999999999999999999999986 489999999999975322 278999999999999984
No 10
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=9.1e-68 Score=526.17 Aligned_cols=294 Identities=24% Similarity=0.399 Sum_probs=262.8
Q ss_pred CCCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC--hhHHHHHHHHHH
Q 015926 84 TMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVIYA 161 (398)
Q Consensus 84 ~~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p--d~lmELll~i~a 161 (398)
..++++||+|+++++||++||+.| |++++++++++|||||.++++. ++|||+|||||||++.| |++||||++++|
T Consensus 18 ~~~~~~i~~g~~~~~la~~ia~~l-g~~l~~~~~~~FpDGE~~v~i~--~~vrg~~V~ivqs~~~p~nd~l~eLll~~~a 94 (330)
T PRK02812 18 DNNRLRLFSGSSNPALAQEVARYL-GMDLGPMIRKRFADGELYVQIQ--ESIRGCDVYLIQPTCAPVNDHLMELLIMVDA 94 (330)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHh-CCCceeeEEEECCCCCEEEEeC--CCCCCCEEEEECCCCCCccHHHHHHHHHHHH
Confidence 357799999999999999999999 6999999999999999888775 89999999999999876 579999999999
Q ss_pred ccccCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHH
Q 015926 162 LPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIP 241 (398)
Q Consensus 162 lr~~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~ 241 (398)
||++||++|++|+|||||+||||++++|+++++|++|+||+. +|+|+||+||+|+.+.++||+.++. ++++.+
T Consensus 95 lr~~ga~ri~~ViPYl~YaRQDr~~~~~e~isak~vA~lL~~-----~g~d~vitvDlH~~~~~~fF~ipv~--nl~~~~ 167 (330)
T PRK02812 95 CRRASARQITAVIPYYGYARADRKTAGRESITAKLVANLITK-----AGADRVLAMDLHSAQIQGYFDIPCD--HVYGSP 167 (330)
T ss_pred HHHhCCceEEEEEecccccccccccCCCCCchHHHHHHHHHh-----cCCCEEEEEECCchHHcCccCCCce--eeeChH
Confidence 999999999999999999999999999999999999999984 5899999999999999999983332 346899
Q ss_pred HHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc---CCCeEEEEEEEcCCcc-EEEEeeCCCCCCEEEEEeccccchHhH
Q 015926 242 LLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ---HFPMIVCNKVRDGNQR-IVRIKEGDPRGRHIVIVDDLVQSGGTL 317 (398)
Q Consensus 242 lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~---~~~~~v~~K~R~~~~~-~~~~~~g~v~gk~viIVDDii~TG~Tl 317 (398)
.+++||.+. +.+++++|+||.|+++|+..+++ +.++.+++|+|+.... ......++++||+|+|||||++||+|+
T Consensus 168 ~l~~~i~~~-~~~~~vvVsPD~gg~~ra~~~A~~L~~~~~~~~~k~R~~~~~~~~~~~~~~v~g~~viiVDDii~TG~T~ 246 (330)
T PRK02812 168 VLLDYLASK-NLEDIVVVSPDVGGVARARAFAKKLNDAPLAIIDKRRQAHNVAEVLNVIGDVKGKTAILVDDMIDTGGTI 246 (330)
T ss_pred HHHHHHHhc-CCCCeEEEEECCccHHHHHHHHHHhCCCCEEEEEeeccCCceeeeEeccccCCCCEEEEEccccCcHHHH
Confidence 999999764 45789999999999999887764 3578889999975433 223346789999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhcc
Q 015926 318 IECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 397 (398)
Q Consensus 318 ~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I~ 397 (398)
.++++.|+++||++|++++|||+|++++.++|.++ ++++|++|||+|++.. .+.+|++++||+++||++|+
T Consensus 247 ~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~-------~id~iv~tnti~~~~~--~~~~~~~~~~va~lla~~i~ 317 (330)
T PRK02812 247 CEGARLLRKEGAKQVYACATHAVFSPPAIERLSSG-------LFEEVIVTNTIPVPEE--RRFPQLKVLSVANMLGEAIW 317 (330)
T ss_pred HHHHHHHhccCCCeEEEEEEcccCChHHHHHHhhC-------CCCEEEEeCCCCChhh--cccCCceEEEHHHHHHHHHH
Confidence 99999999999999999999999999999999865 6999999999998642 34689999999999999984
No 11
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=1.3e-67 Score=520.53 Aligned_cols=280 Identities=27% Similarity=0.425 Sum_probs=250.8
Q ss_pred HHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC--hhHHHHHHHHHHccccCccceEEeecc
Q 015926 99 LAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVIYALPKLFVSSFTLVLPF 176 (398)
Q Consensus 99 LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p--d~lmELll~i~alr~~gA~~ItaViPY 176 (398)
||++||+.| |++++++++++|||||.++++. ++|||+|||||||+++| +++||||++++|||++||++|++|+||
T Consensus 1 la~~ia~~l-~~~l~~~~~~~F~DGE~~vri~--~~v~g~~v~ii~s~~~p~nd~l~ell~~~~a~r~~~a~~i~~ViPY 77 (304)
T PRK03092 1 LAEEVAKEL-GVEVTPTTAYDFANGEIYVRFE--ESVRGCDAFVLQSHTAPINKWLMEQLIMIDALKRASAKRITVVLPF 77 (304)
T ss_pred CHHHHHHHh-CCceeeeEEEECCCCCEEEEEC--CCCCCCEEEEEeCCCCCCcHHHHHHHHHHHHHHHcCCCeEEEEEec
Confidence 689999999 6999999999999999888875 89999999999999886 579999999999999999999999999
Q ss_pred CCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHHHHHHHHhCCCCCCe
Q 015926 177 FPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNI 256 (398)
Q Consensus 177 ~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~lLa~~L~~~~~~~~~ 256 (398)
|||+||||++++|+|++++++|+||+. +|+|+|+++|+|+.+.+|||+.++. ++++.+++++||.+.++.+++
T Consensus 78 l~YaRQDr~~~~~e~isak~va~lL~~-----~g~d~vitvD~H~~~~~~~f~~p~~--~l~~~~~la~~i~~~~~~~~~ 150 (304)
T PRK03092 78 YPYARQDKKHRGREPISARLVADLFKT-----AGADRIMTVDLHTAQIQGFFDGPVD--HLFAMPLLADYVRDKYDLDNV 150 (304)
T ss_pred ccccccccccCCCCCccHHHHHHHHHh-----cCCCeEEEEecChHHHHhhcCCCee--eEechHHHHHHHHHhcCCCCc
Confidence 999999999999999999999999984 5899999999999999999984332 447899999999775456788
Q ss_pred EEEeeCCCchhhHHHhhc--C-CCeEEEEEEEcCC--cc-EEEEeeCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCC
Q 015926 257 SIAFPDDGAWKRFHKQLQ--H-FPMIVCNKVRDGN--QR-IVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAA 330 (398)
Q Consensus 257 vVVaPD~Ga~~Ra~~~~~--~-~~~~v~~K~R~~~--~~-~~~~~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~ 330 (398)
++|+||.|+++|++.+++ + .++.+++|.|.+. +. ......++++||+|+|||||++||+|+.++++.|++.||+
T Consensus 151 vvVspd~Ga~~~a~~la~~L~~~~~~~i~k~R~~~~~~~~~~~~~~~dv~gr~viIVDDIi~TG~Tl~~aa~~Lk~~Ga~ 230 (304)
T PRK03092 151 TVVSPDAGRVRVAEQWADRLGGAPLAFIHKTRDPTVPNQVVANRVVGDVEGRTCVLVDDMIDTGGTIAGAVRALKEAGAK 230 (304)
T ss_pred EEEEecCchHHHHHHHHHHcCCCCEEEEEEEcccCCCCceEEEecCcCCCCCEEEEEccccCcHHHHHHHHHHHHhcCCC
Confidence 999999999999987764 3 6788899999643 22 2334578999999999999999999999999999999999
Q ss_pred EEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhcc
Q 015926 331 KISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 397 (398)
Q Consensus 331 ~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I~ 397 (398)
+|+++||||+|+++++++|.++ |+++|++|||||++.+ ..++|++++|++++||++|+
T Consensus 231 ~I~~~~tH~v~~~~a~~~l~~~-------~~~~i~~t~tip~~~~--~~~~~~~~~sva~~la~~i~ 288 (304)
T PRK03092 231 DVIIAATHGVLSGPAAERLKNC-------GAREVVVTDTLPIPEE--KRFDKLTVLSIAPLLARAIR 288 (304)
T ss_pred eEEEEEEcccCChHHHHHHHHC-------CCCEEEEeeeeccchh--hcCCCeEEEEhHHHHHHHHH
Confidence 9999999999999999999986 7999999999998653 24689999999999999984
No 12
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=3.8e-66 Score=511.23 Aligned_cols=291 Identities=27% Similarity=0.385 Sum_probs=260.5
Q ss_pred EEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC--hhHHHHHHHHHHcccc
Q 015926 88 VCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVIYALPKL 165 (398)
Q Consensus 88 ~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p--d~lmELll~i~alr~~ 165 (398)
++||+|+++++||++||+.| |++++.+++++|||||.++++. ++|+|+||+|+||++.| +++|||+++++|||++
T Consensus 1 ~~i~~~~~~~~la~~ia~~l-g~~~~~~~~~~FpdGE~~vri~--~~v~g~~V~ii~s~~~~~nd~l~eLll~~~alr~~ 77 (309)
T PRK01259 1 MKLFAGNANPELAEKIAKYL-GIPLGKASVGRFSDGEISVEIN--ENVRGKDVFIIQSTCAPTNDNLMELLIMIDALKRA 77 (309)
T ss_pred CEEEECCCCHHHHHHHHHHh-CCceeeeEEEECCCCCEEEEeC--CCCCCCEEEEECCCCCCCcHHHHHHHHHHHHHHHc
Confidence 47999999999999999999 6999999999999999888885 89999999999999766 5799999999999999
Q ss_pred CccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHHHHH
Q 015926 166 FVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLN 245 (398)
Q Consensus 166 gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~lLa~ 245 (398)
||++|++|+|||||+||||++.+|++++++.+|+||+. +|+|+|++||+|+.+.++||+.++. ++.+.+++++
T Consensus 78 ga~~i~lViPYl~YsRQDr~~~~ge~isak~~a~lL~~-----~g~d~vitvD~H~~~~~~~f~~p~~--~l~~~~~l~~ 150 (309)
T PRK01259 78 SAGRITAVIPYFGYARQDRKARSRVPITAKLVANLLET-----AGADRVLTMDLHADQIQGFFDIPVD--NLYGSPILLE 150 (309)
T ss_pred CCceEEEEeeccccchhhhhhccCCCchHHHHHHHHhh-----cCCCEEEEEcCChHHHcCcCCCCce--eeeecHHHHH
Confidence 99999999999999999999999999999999999984 5899999999999999999984332 3468899999
Q ss_pred HHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCcc-EEEEeeCCCCCCEEEEEeccccchHhHHHHHH
Q 015926 246 RLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQR-IVRIKEGDPRGRHIVIVDDLVQSGGTLIECQK 322 (398)
Q Consensus 246 ~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~~-~~~~~~g~v~gk~viIVDDii~TG~Tl~~aa~ 322 (398)
|+.+. +.++++||+||.|++.+++.++. +.++.+++|.|..... ......++++||+|+|||||+|||+|+.++++
T Consensus 151 ~i~~~-~~~~~vvv~pd~Gg~~~A~~la~~Lg~~~~~~~k~r~~~~~~~~~~~~~~~~g~~vliVDDii~TG~T~~~a~~ 229 (309)
T PRK01259 151 DIKQK-NLENLVVVSPDVGGVVRARALAKRLDADLAIIDKRRPRANVSEVMNIIGDVEGRDCILVDDMIDTAGTLCKAAE 229 (309)
T ss_pred HHHhc-CCCCcEEEEECCCcHHHHHHHHHHhCCCEEEEEeecccceeEEEEeecccCCCCEEEEEecccCcHHHHHHHHH
Confidence 99764 45788999999999999987764 5788888998875443 23344678999999999999999999999999
Q ss_pred HHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhcc
Q 015926 323 VLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 397 (398)
Q Consensus 323 ~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I~ 397 (398)
.|+++||++|++++|||+|++++.++|.++ +++++++|||+|++.. ...++|++++|++++||++|+
T Consensus 230 ~l~~~Ga~~v~~~~tH~i~~~~a~~~l~~~-------~~~~iv~t~ti~~~~~-~~~~~k~~~isva~~ia~~i~ 296 (309)
T PRK01259 230 ALKERGAKSVYAYATHPVLSGGAIERIENS-------VIDELVVTDSIPLSEE-AKKCDKIRVLSVAPLLAEAIR 296 (309)
T ss_pred HHHccCCCEEEEEEEeeeCChHHHHHHhcC-------CCCEEEEecCcccchh-hccCCCeEEEEcHHHHHHHHH
Confidence 999999999999999999999999999875 7999999999998653 345789999999999999984
No 13
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional
Probab=100.00 E-value=7.3e-66 Score=519.88 Aligned_cols=297 Identities=21% Similarity=0.276 Sum_probs=255.3
Q ss_pred CCcEEEEeCCCCHHHHHHHHHHh---------------C----CC--ceeeeEEEeeCCCceeEEecCCCCCCCceEEEE
Q 015926 85 MKKVCLFYCPETHSLAERVAAQS---------------D----AI--ELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFL 143 (398)
Q Consensus 85 ~~~~~lfsg~s~~~LA~~Ia~~l---------------~----~~--~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~iv 143 (398)
.++++||+|+++++||++||+.| + |+ +++++++++|||||.++++. ++|||+|||||
T Consensus 6 ~~~~~i~~~~~~~~la~~ia~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~FpDGE~~vri~--~~Vrg~dV~iv 83 (382)
T PRK06827 6 VGSLGIIALPSCRELADKVDEHLVRIRERKENENIESLAFKGYSRESYLIPAKFIRFSNGEAKGEIL--ESVRGKDIYIL 83 (382)
T ss_pred CCceEEEECCCCHHHHHHHHHHHHHhhhhccccccccccccccCCcceeeeeEEEECCCCCEEEEEC--CCCCCCeEEEE
Confidence 46799999999999999999999 3 44 49999999999999888885 89999999999
Q ss_pred EecCC----------------ChhHHHHHHHHHHccccCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCC
Q 015926 144 ASFSS----------------PGKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTS 207 (398)
Q Consensus 144 qs~~~----------------pd~lmELll~i~alr~~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~ 207 (398)
||+++ +|++||||++++||| +||++|++|+|||||+||||+ .+|+|++++++|+||+.
T Consensus 84 qs~~~~~v~~~~~~~~~~~p~nd~lmeLll~idalr-agA~rIt~ViPY~~YaRQDr~-~~~e~itak~vA~lL~~---- 157 (382)
T PRK06827 84 QDVGNYSVTYNMFGEKNHMSPDDHFQDLKRTIDAIR-GKARRITVIMPFLYESRQHKR-KGRESLDCALALQELEE---- 157 (382)
T ss_pred ecCCcccccccccccccCCCCcHHHHHHHHHHHHHh-cCCCeEEEEeecccccccccc-cCCCCccHHHHHHHHHH----
Confidence 99963 367999999999999 999999999999999999999 78999999999999984
Q ss_pred CCCCCEEEEEcCCchhhhcccC-CCCcccccchHHHHHHHHHhCC-----CCCCeEEEeeCCCchhhHHHhhc--CCCeE
Q 015926 208 RGGPTSLVTFDIHALQERFYFG-DTILPCFESAIPLLLNRLQQLP-----DSDNISIAFPDDGAWKRFHKQLQ--HFPMI 279 (398)
Q Consensus 208 ~aG~D~IItVDLHs~q~~gfFn-~~l~~~~~~a~~lLa~~L~~~~-----~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~ 279 (398)
+|+|+|+|||+|+.+.+|||+ .++. ++.+.+.+++|+.+.. +.++++||+||.|+++||+.++. +.+++
T Consensus 158 -~G~d~vitvDlHs~~i~~~F~~~pvd--nl~a~~~l~~~i~~~i~~l~~d~~~~VVVsPD~Gg~~rA~~~A~~Lg~~~a 234 (382)
T PRK06827 158 -LGVDNIITFDAHDPRIENAIPLMGFE--NLYPSYQIIKALLKNEKDLEIDKDHLMVISPDTGAMDRAKYYASVLGVDLG 234 (382)
T ss_pred -cCCCeEEEecCChHHhcccCCCCCcC--CcCchHHHHHHHHHhcccccccCCCcEEEEECccchHHHHHHHHHhCCCEE
Confidence 589999999999999999997 2232 3357888999996531 23688999999999999887664 56888
Q ss_pred EEEEEEcCCc------c-EEEEeeC-CCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhh
Q 015926 280 VCNKVRDGNQ------R-IVRIKEG-DPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQ 351 (398)
Q Consensus 280 v~~K~R~~~~------~-~~~~~~g-~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~ 351 (398)
+++|+|.... . ......+ +++||+|||||||++||+|+.++++.|+++||++|+++||||+|+ +++++|.+
T Consensus 235 i~~K~R~~~~~~~g~~~~~~~~~~g~dV~gr~vIIVDDII~TG~Tl~~aa~~Lk~~GA~~V~~~~tH~vf~-~a~~~l~~ 313 (382)
T PRK06827 235 LFYKRRDYSRVVNGRNPIVAHEFLGRDVEGKDVLIVDDMIASGGSMIDAAKELKSRGAKKIIVAATFGFFT-NGLEKFDK 313 (382)
T ss_pred EEEcccCCcccccCCCceEEEecCCcccCCCEEEEEeCCcCcHHHHHHHHHHHHHcCCCEEEEEEEeecCh-HHHHHHHh
Confidence 9999996421 1 1223456 899999999999999999999999999999999999999999999 99999986
Q ss_pred cCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhcc
Q 015926 352 DTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 397 (398)
Q Consensus 352 ~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I~ 397 (398)
+ .+++++++|++|||||++++ ...++|+++|||+++||++|+
T Consensus 314 ~---~~~g~i~~iv~TdTi~~~~~-~~~~~~~~~isva~llA~~I~ 355 (382)
T PRK06827 314 A---YEEGYFDRIIGTNLVYHPEE-LLSKPWYIEVDMSKLIARIID 355 (382)
T ss_pred h---cccCCCCEEEEeCCCcCchh-hcccCCeEEEEcHHHHHHHHH
Confidence 4 11235999999999999753 234689999999999999984
No 14
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=1.2e-65 Score=502.58 Aligned_cols=280 Identities=23% Similarity=0.315 Sum_probs=250.7
Q ss_pred EEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC-hhHHHHHHHHHHccccCc
Q 015926 89 CLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP-GKIFEQLSVIYALPKLFV 167 (398)
Q Consensus 89 ~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p-d~lmELll~i~alr~~gA 167 (398)
+||+|+++++||++||+.| |++++.+++++|||||.++++. ++|||+||||+|++.++ |++||||++++|||++||
T Consensus 1 ~i~~~~~~~~la~~ia~~l-~~~~~~~~~~~FpdGE~~v~i~--~~v~g~~v~i~~~~~~~~d~l~ell~~~~alr~~ga 77 (285)
T PRK00934 1 MIIGGSASQLLASEVARLL-NTELALVETKRFPDGELYVRIL--GEIDGEDVVIISTTYPQDENLVELLLLIDALRDEGA 77 (285)
T ss_pred CeEeCCCCHHHHHHHHHHH-CCceEeeEEEECCCCCEEEEEC--CCcCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 4899999999999999999 6999999999999999888886 79999999999998776 459999999999999999
Q ss_pred cceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHHHHHHH
Q 015926 168 SSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRL 247 (398)
Q Consensus 168 ~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~lLa~~L 247 (398)
++|++|+|||||+||||++++||+++++++|+||+. +| |+|+|||+|+.+.++||+.+.. ++++.+.|+++|
T Consensus 78 ~~i~~v~PY~~YaRqDr~~~~ge~isak~~a~ll~~-----~~-d~vitvD~H~~~~~~~f~~~~~--~l~a~~~la~~i 149 (285)
T PRK00934 78 KSITLVIPYLGYARQDKRFKPGEPISARAIAKIISA-----YY-DRIITINIHEPSILEFFPIPFI--NLDAAPLIAEYI 149 (285)
T ss_pred CeEEEEecCCcccccccccCCCCCccHHHHHHHHHH-----hc-CEEEEEcCChHHHcCcCCCcEe--EeecHHHHHHHH
Confidence 999999999999999999999999999999999985 36 9999999999999999983332 446899999999
Q ss_pred HhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCccE-EEEeeCCCCCCEEEEEeccccchHhHHHHHHHH
Q 015926 248 QQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQRI-VRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVL 324 (398)
Q Consensus 248 ~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~~~-~~~~~g~v~gk~viIVDDii~TG~Tl~~aa~~L 324 (398)
.+ +.+++++++||.|+.+++..++. +.++.+++|.|...... .....++++||+|+|||||+|||+|+.++++.|
T Consensus 150 ~~--~~~~~vvv~pd~Ga~~~a~~lA~~l~~~~~~i~k~r~~~~~~~~~~~~~~v~Gk~VlIVDDIi~TG~Tl~~aa~~L 227 (285)
T PRK00934 150 GD--KLDDPLVLAPDKGALELAKEAAEILGCEYDYLEKTRISPTEVEIAPKNLDVKGKDVLIVDDIISTGGTMATAIKIL 227 (285)
T ss_pred Hh--cCCCCEEEEeCCchHHHHHHHHHHhCCCEEEEEEEecCCCeEEEeccccccCCCEEEEEcCccccHHHHHHHHHHH
Confidence 65 34677999999999999987764 56788889998754332 222356899999999999999999999999999
Q ss_pred HHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhcc
Q 015926 325 AAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 397 (398)
Q Consensus 325 k~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I~ 397 (398)
+++||++|+++++||+|++++.++|.++ |+++|++|||+|+ +++++|++++||++|+
T Consensus 228 k~~GA~~V~~~~~H~i~~~~a~~~l~~~-------~i~~i~~tnti~~---------~~~~~~va~~la~~i~ 284 (285)
T PRK00934 228 KEQGAKKVYVACVHPVLVGDAILKLYNA-------GVDEIIVTDTLES---------EVSKISVAPLIADLLK 284 (285)
T ss_pred HHCCCCEEEEEEEeeccCcHHHHHHHhC-------CCCEEEEcCCCCC---------CceEEEcHHHHHHHHh
Confidence 9999999999999999999999999986 7999999999985 4689999999999986
No 15
>PLN02369 ribose-phosphate pyrophosphokinase
Probab=100.00 E-value=4.5e-64 Score=494.90 Aligned_cols=282 Identities=24% Similarity=0.386 Sum_probs=250.1
Q ss_pred HHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC--hhHHHHHHHHHHccccCccceEEee
Q 015926 97 HSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVIYALPKLFVSSFTLVL 174 (398)
Q Consensus 97 ~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p--d~lmELll~i~alr~~gA~~ItaVi 174 (398)
++||++||+.| |++++.+++++|||||.++++. ++|||+||||+||+++| +++||||++++|||++||++|++|+
T Consensus 1 ~~lA~~ia~~l-g~~l~~~~~~~FpdGE~~v~i~--~~v~g~~V~iv~s~~~p~nd~l~eLl~~~~a~r~~~a~~i~~Vi 77 (302)
T PLN02369 1 PALSQEIACYL-GLELGKITIKRFADGEIYVQLQ--ESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKRITAVI 77 (302)
T ss_pred ChHHHHHHHHh-CCceeeeEEEECCCCCEEEEEC--CCCCCCeEEEEecCCCCcchHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 37999999999 6999999999999999888885 89999999999999876 5799999999999999999999999
Q ss_pred ccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHHHHHHHHhC-CCC
Q 015926 175 PFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQL-PDS 253 (398)
Q Consensus 175 PY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~lLa~~L~~~-~~~ 253 (398)
|||||+||||++.+|++++++.+|+||+. +|+|+|+++|+|+.+.+|||+.++. ++++.+.+++||.+. ...
T Consensus 78 PYl~YsRQDr~~~~~e~isak~va~lL~~-----~g~d~vi~vDlHs~~i~~~F~ip~~--~l~~~~~~~~~i~~~~~~~ 150 (302)
T PLN02369 78 PYFGYARADRKTQGRESIAAKLVANLITE-----AGADRVLACDLHSGQSMGYFDIPVD--HVYGQPVILDYLASKTISS 150 (302)
T ss_pred ecccccccccccCCCCCchHHHHHHHHHh-----cCCCEEEEEECCchHHhhccCCcee--cccchHHHHHHHHHhCCCC
Confidence 99999999999999999999999999984 5899999999999999999983222 346889999999764 233
Q ss_pred CCeEEEeeCCCchhhHHHhh---cCCCeEEEEEEEcCCcc-EEEEeeCCCCCCEEEEEeccccchHhHHHHHHHHHHcCC
Q 015926 254 DNISIAFPDDGAWKRFHKQL---QHFPMIVCNKVRDGNQR-IVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGA 329 (398)
Q Consensus 254 ~~~vVVaPD~Ga~~Ra~~~~---~~~~~~v~~K~R~~~~~-~~~~~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA 329 (398)
+++++|+||.|+++|+..++ .+.++.+++|+|.+... ......++++||+|+|||||++||+|+.++++.|++.||
T Consensus 151 ~~~vvVspd~gg~~~a~~~a~~l~~~~~~~l~k~R~~~~~~~~~~~~~~v~g~~viivDDii~TG~Tl~~a~~~l~~~Ga 230 (302)
T PLN02369 151 PDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQGHNVAEVMNLIGDVKGKVAIMVDDMIDTAGTITKGAALLHQEGA 230 (302)
T ss_pred CceEEEEECcChHHHHHHHHHHcCCCCEEEEEEecCCcceeeeEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHhCCC
Confidence 67899999999999987665 35688889999976543 223457889999999999999999999999999999999
Q ss_pred CEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhcc
Q 015926 330 AKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 397 (398)
Q Consensus 330 ~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I~ 397 (398)
++|++++|||+|++++.++|.++ ++++|++|||+|++.. ...+|++++|++++||++|+
T Consensus 231 ~~v~~~~tH~v~~~~a~~~l~~~-------~~~~iv~t~ti~~~~~--~~~~~~~~~~v~~~la~~i~ 289 (302)
T PLN02369 231 REVYACATHAVFSPPAIERLSSG-------LFQEVIVTNTIPVSEK--NYFPQLTVLSVANLLGETIW 289 (302)
T ss_pred CEEEEEEEeeeeCHHHHHHHHhC-------CCCEEEEeCCCCChhh--cccCCceEEEHHHHHHHHHH
Confidence 99999999999999999999885 6999999999998642 24679999999999999984
No 16
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=100.00 E-value=5.4e-63 Score=488.69 Aligned_cols=288 Identities=28% Similarity=0.438 Sum_probs=257.9
Q ss_pred EEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEE-EecCCC--hhHHHHHHHHHHccc
Q 015926 88 VCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFL-ASFSSP--GKIFEQLSVIYALPK 164 (398)
Q Consensus 88 ~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~iv-qs~~~p--d~lmELll~i~alr~ 164 (398)
++||+|+++++||++||+.| |++++.+++++|||||.++++. ++++|+||+|+ ||+++| +++|||+++++|||+
T Consensus 1 ~~i~~~~~~~~la~~ia~~l-g~~~~~~~~~~FpdGE~~v~i~--~~v~g~~v~iv~~s~~~~~~~~l~el~~~~~a~r~ 77 (308)
T TIGR01251 1 MKIFSGSSNQELAQKVAKNL-GLPLGDVEVKRFPDGELYVRIN--ESVRGKDVFIIQQSTSAPVNDNLMELLIMIDALKR 77 (308)
T ss_pred CEEEECCCCHHHHHHHHHHh-CCeeeeeEEEECCCCCEEEEEC--CCCCCCeEEEEeCCCCCCccHHHHHHHHHHHHHHH
Confidence 36899999999999999999 6999999999999999888885 89999999999 999865 579999999999999
Q ss_pred cCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHHHH
Q 015926 165 LFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLL 244 (398)
Q Consensus 165 ~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~lLa 244 (398)
+||++|++|+|||||+||||++++||+++++.+|+||+. +|+|+|+++|+|+.+.++||+.++. ++.+.+.++
T Consensus 78 ~ga~~i~~v~PYl~Y~RqDr~~~~ge~is~~~~a~ll~~-----~g~d~vit~DlHs~~~~~~f~ip~~--~l~a~~~l~ 150 (308)
T TIGR01251 78 ASAKSITAVIPYYGYARQDKKFKSREPISAKLVANLLET-----AGADRVLTVDLHSPQIQGFFDVPVD--NLYASPVLA 150 (308)
T ss_pred cCCCeEEEEEEecccchhccccCCCCCchHHHHHHHHHH-----cCCCEEEEecCChHHhcCcCCCcee--cccCHHHHH
Confidence 999999999999999999999999999999999999984 5899999999999999999984332 346889999
Q ss_pred HHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEc-CCcc-EEEEeeCCCCCCEEEEEeccccchHhHHHH
Q 015926 245 NRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRD-GNQR-IVRIKEGDPRGRHIVIVDDLVQSGGTLIEC 320 (398)
Q Consensus 245 ~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~-~~~~-~~~~~~g~v~gk~viIVDDii~TG~Tl~~a 320 (398)
+|+.+.. .+++++|+||.|+++++..++. +.++.+++|.|. .... ......++++||+|+|||||++||+|+.++
T Consensus 151 ~~i~~~~-~~~~viv~pd~g~~~~A~~lA~~Lg~~~~~i~k~r~~~~~~~~~~~~~~~v~g~~vliVDDii~tG~Tl~~a 229 (308)
T TIGR01251 151 EYLKKKI-LDNPVVVSPDAGGVERAKKVADALGCPLAIIDKRRISATNEVEVMNLVGDVEGKDVVIVDDIIDTGGTIAKA 229 (308)
T ss_pred HHHHhhC-CCCCEEEEECCchHHHHHHHHHHhCCCEEEEEEEecCCCCEEEEEecccccCCCEEEEEccccCCHHHHHHH
Confidence 9998753 4678999999999999987765 568888999997 3322 223346789999999999999999999999
Q ss_pred HHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhcc
Q 015926 321 QKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 397 (398)
Q Consensus 321 a~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I~ 397 (398)
++.|++.||++|++++|||+|+++++++|.++ |++++++|||+|++ ...+|++++|++++||++|+
T Consensus 230 ~~~l~~~ga~~v~~~~th~v~~~~a~~~l~~~-------~~~~iv~tdt~~~~----~~~~~~~~v~va~~la~~i~ 295 (308)
T TIGR01251 230 AEILKSAGAKRVIAAATHGVFSGPAIERIANA-------GVEEVIVTNTIPHE----KHKPKVSVISVAPLIAEAIR 295 (308)
T ss_pred HHHHHhcCCCEEEEEEEeeecCcHHHHHHHhC-------CCCEEEEeCCCCcc----ccCCCcEEEEhHHHHHHHHH
Confidence 99999999999999999999999999999986 79999999999985 24679999999999999984
No 17
>KOG1503 consensus Phosphoribosylpyrophosphate synthetase-associated protein [Amino acid transport and metabolism; Nucleotide transport and metabolism]
Probab=100.00 E-value=2.1e-53 Score=397.15 Aligned_cols=294 Identities=23% Similarity=0.330 Sum_probs=255.4
Q ss_pred CCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC--hhHHHHHHHHHHc
Q 015926 85 MKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVIYAL 162 (398)
Q Consensus 85 ~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p--d~lmELll~i~al 162 (398)
..++.+|+|+++++||+.|+++| |+++++..+.+=+|+|+.|.|. ++||||||||+|+.+.+ .++||||+|++||
T Consensus 6 ~sg~vl~s~ns~~elak~vaerl-gi~~g~~~vy~~tnret~vei~--~svrgkdvfiiqt~skdvn~~vmellim~yac 82 (354)
T KOG1503|consen 6 SSGMVLFSGNSHPELAKMVAERL-GIELGKATVYQKTNRETRVEIK--ESVRGKDVFIIQTGSKDVNNDVMELLIMAYAC 82 (354)
T ss_pred cCCeEEEcCCCCHHHHHHHHHHh-cccccceEEEecCCCceEEEhh--hhccCceEEEEEecCcccchHHHHHHHHHHHH
Confidence 45799999999999999999999 6999999999999999988886 89999999999999886 4699999999999
Q ss_pred cccCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHH
Q 015926 163 PKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPL 242 (398)
Q Consensus 163 r~~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~l 242 (398)
+.+.|++|+.|+|||||++|.++.+.|. +..+++|.||. ++|..++|++|||...+||||+.++. ++.++|.
T Consensus 83 kts~aksiigvipy~pyskqckmrkrgs-iv~klla~mmc-----kaglthlitmdlhqkeiqgff~~pvd--nlraspf 154 (354)
T KOG1503|consen 83 KTSCAKSIIGVIPYLPYSKQCKMRKRGS-IVSKLLASMMC-----KAGLTHLITMDLHQKEIQGFFSIPVD--NLRASPF 154 (354)
T ss_pred hhhhhhceEEEeecCccchhhhhhhccc-HHHHHHHHHHH-----hcccceEEeehhhhHhhcceeccccc--ccccCHH
Confidence 9999999999999999999999988766 66889999997 67999999999999999999993332 3368999
Q ss_pred HHHHHHhC-CCCCCeEEEeeCCCchhhHHHhhcC--CCeEEEEEEEc--------C---C--c---------c----E--
Q 015926 243 LLNRLQQL-PDSDNISIAFPDDGAWKRFHKQLQH--FPMIVCNKVRD--------G---N--Q---------R----I-- 291 (398)
Q Consensus 243 La~~L~~~-~~~~~~vVVaPD~Ga~~Ra~~~~~~--~~~~v~~K~R~--------~---~--~---------~----~-- 291 (398)
|.+||++. .++++.++|+-..|..++|...++. +++++++.+.. + . . . +
T Consensus 155 llqyiqe~ipdyrnavivaksp~~akka~syaerlrlglavihge~k~~e~d~~dgr~spp~~~~~t~~~~~~lp~~~~k 234 (354)
T KOG1503|consen 155 LLQYIQEEIPDYRNAVIVAKSPGVAKKAQSYAERLRLGLAVIHGEQKDTESDLVDGRHSPPPVVTATTHPSLELPAQISK 234 (354)
T ss_pred HHHHHHHhCccccceEEEecCcchhhHHHhHHHHHhhceeEeeccccccccccccCCcCCCCccccccCccccCchhhcc
Confidence 99999874 5789999999999999998766542 34444443221 0 0 0 0 0
Q ss_pred ---EEEeeCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEcc
Q 015926 292 ---VRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISD 368 (398)
Q Consensus 292 ---~~~~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~td 368 (398)
.....||+.||..|+||||||.-.++.+|++.||+.||-+||+++|||+++.+|...|+++ +++++++||
T Consensus 235 ~kppltvvgdvggriaimvddiiddvqsfvaaae~lkergaykiyv~athgllssdapr~lees-------~idevvvtn 307 (354)
T KOG1503|consen 235 EKPPLTVVGDVGGRIAIMVDDIIDDVQSFVAAAEVLKERGAYKIYVMATHGLLSSDAPRLLEES-------PIDEVVVTN 307 (354)
T ss_pred cCCCeEEEeccCceEEEEehhhHHhHHHHHHHHHHHHhcCceEEEEEeecccccccchhhhhcC-------CCceEEEec
Confidence 1134789999999999999999999999999999999999999999999999999999987 699999999
Q ss_pred CcccccccccCCCCeEEEechHHHHhhcc
Q 015926 369 SCPVTVKEVMSKPPFEVLSLAGSIASALQ 397 (398)
Q Consensus 369 tip~~~~~~~~~~k~~vlsva~liAe~I~ 397 (398)
|+|++. +..+|+|++.+|++-+|+|+|+
T Consensus 308 tvphev-qklqc~kiktvdislii~eair 335 (354)
T KOG1503|consen 308 TVPHEV-QKLQCHKIKTVDISLIISEAIR 335 (354)
T ss_pred CCcHHH-HhhcCCccceeehhhHHHHHHH
Confidence 999975 3468999999999999999985
No 18
>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B ....
Probab=100.00 E-value=7.7e-35 Score=249.89 Aligned_cols=113 Identities=31% Similarity=0.512 Sum_probs=96.0
Q ss_pred EEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC--hhHHHHHHHHHHcccc
Q 015926 88 VCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP--GKIFEQLSVIYALPKL 165 (398)
Q Consensus 88 ~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p--d~lmELll~i~alr~~ 165 (398)
++||+|+++++||++||+.| |++++.+++++|||||.++++. +++||+||||||++++| |++||||++++|||++
T Consensus 1 m~I~~g~~~~~La~~ia~~L-~~~~~~~~~~~F~dGE~~v~i~--~~v~g~dv~iiqs~~~~~nd~lmeLll~i~a~r~~ 77 (116)
T PF13793_consen 1 MVIFSGSSSQDLAERIAEAL-GIPLGKVETKRFPDGETYVRIP--ESVRGKDVFIIQSTSPPVNDNLMELLLLIDALRRA 77 (116)
T ss_dssp EEEEESSSGHHHHHHHHHHT-TS-EE-EEEEE-TTS-EEEEES--S--TTSEEEEE---SSSHHHHHHHHHHHHHHHHHT
T ss_pred CEEEECCCCHHHHHHHHHHh-CCceeeeEEEEcCCCCEEEEec--ccccCCceEEEEecCCchhHHHHHHHHHHHHHHHc
Confidence 57999999999999999999 6999999999999999888886 79999999999999998 6899999999999999
Q ss_pred CccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcC
Q 015926 166 FVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNI 204 (398)
Q Consensus 166 gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~ 204 (398)
||++|++|+|||||+||||+ .+||+++++.+|+||+.+
T Consensus 78 ~a~~i~~ViPYl~YaRQDr~-~~ge~isak~~a~lL~~~ 115 (116)
T PF13793_consen 78 GAKRITLVIPYLPYARQDRR-KPGEPISAKVVAKLLSAA 115 (116)
T ss_dssp TBSEEEEEESS-TTTTSSSS-STTC--HHHHHHHHHHHH
T ss_pred CCcEEEEeccchhhhhhccC-CCCCcchHHHHHHHHHhc
Confidence 99999999999999999999 999999999999999853
No 19
>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A ....
Probab=99.97 E-value=3.9e-31 Score=242.05 Aligned_cols=138 Identities=28% Similarity=0.439 Sum_probs=104.4
Q ss_pred CCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCC-------------------------------ccEEEEeeCC
Q 015926 252 DSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGN-------------------------------QRIVRIKEGD 298 (398)
Q Consensus 252 ~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~-------------------------------~~~~~~~~g~ 298 (398)
+|++.|||+||.|+.+||..+++ ++++++++++|... +.....+.||
T Consensus 1 dy~naVIVa~~~g~akRAts~Ad~L~l~~avih~e~~~~~~~~~~~~~s~p~~~~~~~~~~~~~~~~~~~e~~~~~vVGD 80 (184)
T PF14572_consen 1 DYRNAVIVAKDPGGAKRATSFADRLRLGFAVIHGERRDSESDGVDGRHSPPMSRSAAVSSSEEIPEMTPKEKPPMNVVGD 80 (184)
T ss_dssp TGGGEEEEESSGGGHHHHHHHHHHCT-EEEEE------------------------------------------EEEES-
T ss_pred CCCCCEEEeCCCCchHhHHHHHHHhCCCeeEecCccccccccccccccCCCccccccccccchhhhcccCcccceEEEEE
Confidence 46789999999999999988775 34567777776310 0001235799
Q ss_pred CCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCccccccccc
Q 015926 299 PRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVM 378 (398)
Q Consensus 299 v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~ 378 (398)
|+||+||||||||+||+|+.++++.||++||++||+++|||+|+++|.++|+++ +|++||+|||||++.+ ..
T Consensus 81 V~gk~~IIvDDiIdtg~Tl~~aA~~Lk~~GA~~V~~~aTHgvfs~~A~~~l~~s-------~Id~vvvTnTIp~~~~-~~ 152 (184)
T PF14572_consen 81 VKGKICIIVDDIIDTGGTLIKAAELLKERGAKKVYACATHGVFSGDAPERLEES-------PIDEVVVTNTIPQEEQ-KL 152 (184)
T ss_dssp -TTSEEEEEEEEESSTHHHHHHHHHHHHTTESEEEEEEEEE---TTHHHHHHHS-------SESEEEEETTS--HHH-HH
T ss_pred ccCCeEeeecccccchHHHHHHHHHHHHcCCCEEEEEEeCcccCchHHHHHhhc-------CCeEEEEeccccCchh-hh
Confidence 999999999999999999999999999999999999999999999999999987 6999999999999652 34
Q ss_pred CCCCeEEEechHHHHhhcc
Q 015926 379 SKPPFEVLSLAGSIASALQ 397 (398)
Q Consensus 379 ~~~k~~vlsva~liAe~I~ 397 (398)
+++|+++|||+++|||+|+
T Consensus 153 ~~~Ki~vldis~llaeaI~ 171 (184)
T PF14572_consen 153 QCPKIKVLDISPLLAEAIR 171 (184)
T ss_dssp H-TTEEEE--HHHHHHHHH
T ss_pred cCCCEeEeehHHHHHHHHH
Confidence 6899999999999999984
No 20
>PRK13811 orotate phosphoribosyltransferase; Provisional
Probab=99.59 E-value=2.3e-14 Score=130.83 Aligned_cols=148 Identities=16% Similarity=0.151 Sum_probs=107.0
Q ss_pred HHHHHHHHcCCCCCCCCCEEEEEcCCchhhhccc-C-CCCcccccchHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHh
Q 015926 195 FTLARILSNIPTSRGGPTSLVTFDIHALQERFYF-G-DTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQ 272 (398)
Q Consensus 195 k~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfF-n-~~l~~~~~~a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~ 272 (398)
..++++|.+ .|++++-.++||+.+.++|| | ..+.. +-.....+++.+.+. .+..+|++|+.|+++++..+
T Consensus 3 ~~~~~~l~~-----~ga~~~g~f~L~SG~~s~~y~d~~~l~~-~p~~~~~l~~~l~~~--~~~d~Vvg~~~gGi~~A~~~ 74 (170)
T PRK13811 3 NTIAELLIS-----YKAIEFGDFTLASGAKSRYYIDIKTAIT-HPALLKEIAAEVAKR--YDFDVVAGVAVGGVPLAVAV 74 (170)
T ss_pred HHHHHHHHH-----CCCEEECCEEEccCCcCCEEEeCchhcc-CHHHHHHHHHHHHhh--CCCCEEEecCcCcHHHHHHH
Confidence 356788874 58899999999999998887 4 22211 111233445555432 24458999999999998765
Q ss_pred hc--CCCeEEEEEEEcCCccEEEEeeCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHh
Q 015926 273 LQ--HFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFK 350 (398)
Q Consensus 273 ~~--~~~~~v~~K~R~~~~~~~~~~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~ 350 (398)
+. +.|+.+++|+++..... ....++++||+|+||||+++||+|+.++++.|+++||+-+.+++.-..- .++.++++
T Consensus 75 a~~l~~p~~~~rK~~k~~g~~-~~~~g~~~g~~VlIVDDvi~TG~T~~~~~~~l~~~Ga~v~~~~~~vdr~-~g~~~~l~ 152 (170)
T PRK13811 75 SLAAGKPYAIIRKEAKDHGKA-GLIIGDVKGKRVLLVEDVTTSGGSALYGIEQLRAAGAVVDDVVTVVDRE-QGAEELLA 152 (170)
T ss_pred HHHHCCCEEEEecCCCCCCCc-ceEEcccCCCEEEEEEecccccHHHHHHHHHHHHCCCeEEEEEEEEECC-ccHHHHHH
Confidence 53 67888888887544331 2235779999999999999999999999999999999988888755543 34567776
Q ss_pred hc
Q 015926 351 QD 352 (398)
Q Consensus 351 ~~ 352 (398)
+.
T Consensus 153 ~~ 154 (170)
T PRK13811 153 EL 154 (170)
T ss_pred hc
Confidence 53
No 21
>PRK11595 DNA utilization protein GntX; Provisional
Probab=99.56 E-value=2.9e-15 Score=142.45 Aligned_cols=152 Identities=22% Similarity=0.253 Sum_probs=105.9
Q ss_pred cceEEeeccCCCCCcc--ccccCCCcchHHHHHHHHHcCCC------CCCCCCEEEEEcCCch--hhhcccCCCCccccc
Q 015926 168 SSFTLVLPFFPTGTSE--RMEDEGDVATAFTLARILSNIPT------SRGGPTSLVTFDIHAL--QERFYFGDTILPCFE 237 (398)
Q Consensus 168 ~~ItaViPY~~YsRQD--r~~~~ge~isak~lA~lL~~~~~------~~aG~D~IItVDLHs~--q~~gfFn~~l~~~~~ 237 (398)
.++.++..|-+..|+- +..+.|+...++.++++|..... ....+|.|++||+|.. +.||| |
T Consensus 62 ~~~~a~~~Y~g~~r~lI~~~Ky~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~d~ivpVPl~~~r~~~RGf-n-------- 132 (227)
T PRK11595 62 QRLVFVSDYAPPLSGLIHQLKFSRRSELASVLARLLLLEWLQARRSTGLQKPDRIISVPLHQRRHWRRGF-N-------- 132 (227)
T ss_pred hheeeeeecccHHHHHHHHHHHCccHHHHHHHHHHHHHHHHHHhhhhcccCCCeEEecCCCHHHHHHCCC-C--------
Confidence 4677888999988875 22356777888888888753210 0125789999999986 45786 5
Q ss_pred chHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhcCCCeEEEEEEEcCCccEEEEeeCCCCCCEEEEEeccccchHhH
Q 015926 238 SAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTL 317 (398)
Q Consensus 238 ~a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~~~~~~v~~K~R~~~~~~~~~~~g~v~gk~viIVDDii~TG~Tl 317 (398)
++.++|+.+.+..+. .++.+.+.|.+....+... ..++|..+.+..+...++++||+|+|||||+|||.|+
T Consensus 133 -q~~~la~~la~~~~~------~~~~~~l~r~~~~~~q~~l--~~~~R~~n~~~~f~~~~~~~~~~vllvDDv~tTG~Tl 203 (227)
T PRK11595 133 -QSDLLCRPLARWLGC------DYDSEALTRTRATATQHFL--SARLRKRNLKNAFRLELPVQGQHMAIVDDVVTTGSTV 203 (227)
T ss_pred -HHHHHHHHHHHHHCC------CCcccceEEecCCCCcccC--CHHHHhhhhhhhhccCCCCCCCEEEEEeeeecchHHH
Confidence 688889888775432 1233444554433333222 1345554433223335679999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEEE
Q 015926 318 IECQKVLAAHGAAKISAYVT 337 (398)
Q Consensus 318 ~~aa~~Lk~~GA~~V~~~~T 337 (398)
.++++.|++.|+++|++++.
T Consensus 204 ~~~~~~L~~~g~~~V~~~~l 223 (227)
T PRK11595 204 AEIAQLLLRNGAASVQVWCL 223 (227)
T ss_pred HHHHHHHHHcCCcEEEEEEE
Confidence 99999999999999999983
No 22
>PRK08525 amidophosphoribosyltransferase; Provisional
Probab=99.49 E-value=1.9e-13 Score=142.05 Aligned_cols=133 Identities=17% Similarity=0.201 Sum_probs=99.5
Q ss_pred CCeEEEeeCCCchhhHHHhhc--CCCe--EEEEEEEcC------Cc-----cEEE--EeeC-CCCCCEEEEEeccccchH
Q 015926 254 DNISIAFPDDGAWKRFHKQLQ--HFPM--IVCNKVRDG------NQ-----RIVR--IKEG-DPRGRHIVIVDDLVQSGG 315 (398)
Q Consensus 254 ~~~vVVaPD~Ga~~Ra~~~~~--~~~~--~v~~K~R~~------~~-----~~~~--~~~g-~v~gk~viIVDDii~TG~ 315 (398)
.++++..||. ++.+|..+++ +.|+ .+++|++.+ .+ .... ...+ .++||+|+||||+++||+
T Consensus 276 ~d~Vv~vPd~-g~~~A~~~A~~lgip~~~~l~rk~~~~r~~i~~~qr~rn~~~~~~~~~~~~~v~gK~VlLVDDvitTG~ 354 (445)
T PRK08525 276 ADFVVPVPDS-GVPAAIGYAQESGIPFEMAIVRNHYVGRTFIEPTQEMRNLKVKLKLNPMSKVLEGKRIVVIDDSIVRGT 354 (445)
T ss_pred CCeEEECCch-HHHHHHHHHHHhCCCccceEEEeeccccccCCHHHHHHhhheeEEecccccccCCCeEEEEecccCcHH
Confidence 3468888885 4777766654 4554 556665432 11 1111 1223 489999999999999999
Q ss_pred hHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHh
Q 015926 316 TLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIAS 394 (398)
Q Consensus 316 Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe 394 (398)
|+.++++.|+++||++|+++++||+|..++...|..+ +++++++||.=.-+..+....+-+..+|+..+...
T Consensus 355 Tl~~a~~~Lr~aGA~~V~v~~~hp~~~~~~~~~i~~~-------~~~~li~~~~~~~ei~~~~~adsl~~ls~~~l~~~ 426 (445)
T PRK08525 355 TSKKIVSLLRAAGAKEIHLRIACPEIKFPCYYGIDTP-------TFEELISANKSVEEVRKYIGADSLSFLSIDELTRS 426 (445)
T ss_pred HHHHHHHHHHhcCCCEEEEEEECCCcCCchhhhCcCC-------ChhhEEEcCCCHHHHHHHhCCCeEeccCHHHHHHH
Confidence 9999999999999999999999999999999999875 69999999973222223355788999999887653
No 23
>COG1040 ComFC Predicted amidophosphoribosyltransferases [General function prediction only]
Probab=99.48 E-value=7e-14 Score=133.09 Aligned_cols=150 Identities=19% Similarity=0.208 Sum_probs=104.0
Q ss_pred ccceEEeeccCCCCCcc--ccccCCCcchHHHHHHHHHcCCCC-CCCCCEEEEEcCCchh--hhcccCCCCcccccchHH
Q 015926 167 VSSFTLVLPFFPTGTSE--RMEDEGDVATAFTLARILSNIPTS-RGGPTSLVTFDIHALQ--ERFYFGDTILPCFESAIP 241 (398)
Q Consensus 167 A~~ItaViPY~~YsRQD--r~~~~ge~isak~lA~lL~~~~~~-~aG~D~IItVDLHs~q--~~gfFn~~l~~~~~~a~~ 241 (398)
-.+..++..|-+..|+- +....|+...++.+|++|.....+ ..-+|.||+||+|..+ .||| | |++
T Consensus 65 ~~~~~~~~~Y~~~l~~~i~~~Kf~~~~~l~~~la~~l~~~~~~~~~~~~~iVpVPls~~r~~~RGF-N---------Q~~ 134 (225)
T COG1040 65 FERLRSLGSYNGPLRELISQLKFQGDLDLAKLLARLLAKALDDFLEKPDLIVPVPLSPSRLLERGF-N---------QSE 134 (225)
T ss_pred ceeEEEEEEccHHHHHHHHHhhhCCchhHHHHHHHHHHHHHhhccccCCeEEEecCCHHHHHHcCC-C---------HHH
Confidence 34677888888888875 223557778888999888653220 1247899999999764 5777 6 799
Q ss_pred HHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhcCCCeEEEEEEEcCCccEEEEeeCCCCC-CEEEEEeccccchHhHHHH
Q 015926 242 LLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRG-RHIVIVDDLVQSGGTLIEC 320 (398)
Q Consensus 242 lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~~~~~~v~~K~R~~~~~~~~~~~g~v~g-k~viIVDDii~TG~Tl~~a 320 (398)
.|++.+...++. +. ...|.+....+... -.++|..+.+..+...+..+. |+|+|||||+|||.|+.++
T Consensus 135 ~la~~l~~~~~~--~~-------~~~r~k~~~~q~~l--~~~~rr~nl~~aF~~~~~~~~~~~vlLvDDV~TTGaTl~~~ 203 (225)
T COG1040 135 LLARALARRLGK--PI-------ALRRVKDTSPQQGL--KALERRRNLKGAFRLKKGIEEPKNVLLVDDVYTTGATLKEA 203 (225)
T ss_pred HHHHHHHHHhCc--hH-------HHHHHhcccccccc--chHHHHHhccCCeecCCCCCCCCeEEEEecccccHHHHHHH
Confidence 999999875432 11 34443433322221 134455444323334455554 9999999999999999999
Q ss_pred HHHHHHcCCCEEEEEEE
Q 015926 321 QKVLAAHGAAKISAYVT 337 (398)
Q Consensus 321 a~~Lk~~GA~~V~~~~T 337 (398)
++.|++.||++|.+++.
T Consensus 204 ~~~L~~~Ga~~v~~~~l 220 (225)
T COG1040 204 AKLLREAGAKRVFVLTL 220 (225)
T ss_pred HHHHHHcCCceEEEEEE
Confidence 99999999999999974
No 24
>TIGR00201 comF comF family protein. This protein is found in species that do (Bacillus subtilis, Haemophilus influenzae) or do not (E. coli, Borrelia burgdorferi) have described systems for natural transformation with exogenous DNA. It is involved in competence for transformation in Bacillus subtilis.
Probab=99.47 E-value=4.5e-14 Score=130.67 Aligned_cols=146 Identities=22% Similarity=0.200 Sum_probs=95.6
Q ss_pred EEeeccCCCCCcc-cc-ccCCCcchHHHHHHHHHcCCCC--CCCCCEEEEEcCCch--hhhcccCCCCcccccchHHHHH
Q 015926 171 TLVLPFFPTGTSE-RM-EDEGDVATAFTLARILSNIPTS--RGGPTSLVTFDIHAL--QERFYFGDTILPCFESAIPLLL 244 (398)
Q Consensus 171 taViPY~~YsRQD-r~-~~~ge~isak~lA~lL~~~~~~--~aG~D~IItVDLHs~--q~~gfFn~~l~~~~~~a~~lLa 244 (398)
.++..|-+..|+- .. .+.|+...++.++++|...... ...+|.|++||+|.. +.||| | ++.+|+
T Consensus 36 ~~~~~Y~~~~~~li~~~K~~~~~~l~~~l~~~l~~~~~~~~~~~~~~ivpVP~~~~r~~~RGf-n---------q~~~la 105 (190)
T TIGR00201 36 VSVYTYNEPLKELISRFKFRGQAEIIRALASLLSLTVSKAYRDLPDVIVPVPLSKEREWRRGF-N---------QADLLA 105 (190)
T ss_pred EEEEECchHHHHHHHHhccCCChHHHHHHHHHHHHHHHhhccCCCCEEEeCCCCHHHHHHhCC-C---------HHHHHH
Confidence 5667888877764 22 3556777788888877542100 113589999999986 46887 6 788999
Q ss_pred HHHHhCCCCCCeEEEeeCCCchhhHHHhhcCCCeEEEEEEEcCCccEEEEeeC-CCCCCEEEEEeccccchHhHHHHHHH
Q 015926 245 NRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEG-DPRGRHIVIVDDLVQSGGTLIECQKV 323 (398)
Q Consensus 245 ~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~~~~~~v~~K~R~~~~~~~~~~~g-~v~gk~viIVDDii~TG~Tl~~aa~~ 323 (398)
+.|.+.... ....+.|... ..+... .+++|..+.+..+.... +++||+|+|||||+|||.|+.++++.
T Consensus 106 ~~l~~~~~~--------~~~~l~r~~~-~~Q~~l--~~~~R~~n~~~~f~~~~~~~~~~~vllvDDV~TTGaTl~~~~~~ 174 (190)
T TIGR00201 106 QCLSRWLFN--------YHNIVIRLNN-ETQSKL--KATLRFLNLENAFDLKNNSFQGRNIVLVDDVVTTGATLHEIARL 174 (190)
T ss_pred HHHHHHhCC--------CcceEEEecc-cccccC--CHHHHHHHHhCcEEccCCCCCCCEEEEEeeeeccHHHHHHHHHH
Confidence 988764321 0112222222 112111 12344333221222222 48899999999999999999999999
Q ss_pred HHHcCCCEEEEEEE
Q 015926 324 LAAHGAAKISAYVT 337 (398)
Q Consensus 324 Lk~~GA~~V~~~~T 337 (398)
|+++||.+|++++.
T Consensus 175 L~~~Ga~~V~~~~l 188 (190)
T TIGR00201 175 LLELGAASVQVWTL 188 (190)
T ss_pred HHHcCCCEEEEEEE
Confidence 99999999999973
No 25
>PLN02293 adenine phosphoribosyltransferase
Probab=99.38 E-value=1.1e-11 Score=115.04 Aligned_cols=110 Identities=16% Similarity=0.197 Sum_probs=86.5
Q ss_pred HHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCcc-------------EEEEeeCCC-CCCE
Q 015926 240 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQR-------------IVRIKEGDP-RGRH 303 (398)
Q Consensus 240 ~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~~-------------~~~~~~g~v-~gk~ 303 (398)
.+++++++... +..+|++|+.+|+..+..++. +.++++++|.|+.... ......+.+ +|++
T Consensus 51 ~~~l~~~~~~~---~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~~rK~~k~~~~~~~~~~~~~~g~~~l~l~~~~i~~G~r 127 (187)
T PLN02293 51 IDLFVERYRDM---GISVVAGIEARGFIFGPPIALAIGAKFVPLRKPGKLPGEVISEEYVLEYGTDCLEMHVGAVEPGER 127 (187)
T ss_pred HHHHHHHHhhc---CCCEEEEeCCCchHHHHHHHHHHCCCEEEEEecCCCCCceEEEEEeccCCceEEEEEcCccCCCCE
Confidence 55666666542 446899999999999876553 5788888887753211 011123566 7999
Q ss_pred EEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhc
Q 015926 304 IVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQD 352 (398)
Q Consensus 304 viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~ 352 (398)
|+||||+++||+|+.++++.|++.|+..+.++|.|.+...++.+++.+.
T Consensus 128 VlIVDDvitTG~T~~~~~~~l~~~Ga~~v~~~~~~~~~~~~g~~~l~~~ 176 (187)
T PLN02293 128 ALVIDDLIATGGTLCAAINLLERAGAEVVECACVIELPELKGREKLNGK 176 (187)
T ss_pred EEEEeccccchHHHHHHHHHHHHCCCEEEEEEEEEEcCCccHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999764
No 26
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=99.30 E-value=1.8e-11 Score=112.71 Aligned_cols=100 Identities=22% Similarity=0.272 Sum_probs=76.0
Q ss_pred hHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCe--EEEEEEEcCCc----cEE--EEeeCCCCCCEEEEEe
Q 015926 239 AIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPM--IVCNKVRDGNQ----RIV--RIKEGDPRGRHIVIVD 308 (398)
Q Consensus 239 a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~--~v~~K~R~~~~----~~~--~~~~g~v~gk~viIVD 308 (398)
....+|++|.+.+..+++++|+++.|++.+|..++. +.++ .++++.|.... ... .....+++||+|+|||
T Consensus 25 ~i~~la~~i~~~~~~~~~viV~i~~gg~~~A~~La~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~gk~VLIVD 104 (181)
T PRK09162 25 AIDRMADEITADLADENPLVLCVMGGGLVFTGQLLPRLDFPLEFDYLHATRYRNETTGGELVWKVKPRESLKGRTVLVVD 104 (181)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHHcCCCcccCEEEEEecCCCccCCceeEecCCCCCCCCCEEEEEc
Confidence 467788888775445567999999999999987765 3332 34556665331 111 1124578999999999
Q ss_pred ccccchHhHHHHHHHHHHcCCCEEEEEEEe
Q 015926 309 DLVQSGGTLIECQKVLAAHGAAKISAYVTH 338 (398)
Q Consensus 309 Dii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH 338 (398)
||+|||.|+.++++.|++.||++|++++.+
T Consensus 105 DIidTG~Tl~~~~~~Lk~~Ga~~V~~avL~ 134 (181)
T PRK09162 105 DILDEGHTLAAIRDRCLEMGAAEVYSAVLV 134 (181)
T ss_pred cccCcHHHHHHHHHHHHhCCCCEEEEEEEE
Confidence 999999999999999999999999999833
No 27
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=99.29 E-value=1.5e-11 Score=111.92 Aligned_cols=100 Identities=15% Similarity=0.190 Sum_probs=74.1
Q ss_pred hHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhcCCC----eEEEEEE--EcCC---ccEE--EEeeCCCCCCEEEEE
Q 015926 239 AIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFP----MIVCNKV--RDGN---QRIV--RIKEGDPRGRHIVIV 307 (398)
Q Consensus 239 a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~~~~----~~v~~K~--R~~~---~~~~--~~~~g~v~gk~viIV 307 (398)
....||+.|.+.+..+++++++|+.||+.+++.+++.++ +.++.-. |... .... .....+++||+|+||
T Consensus 11 ~i~~lA~~I~~~~~~~~~vvv~i~~GG~~~a~~l~~~L~~~~~v~~i~~~~Y~~~~~~~~~~~~~~~~~~~~~gk~vliv 90 (166)
T TIGR01203 11 RIAELAKQITEDYAGKPLVLLCVLKGSFPFFADLIRYIAVPVQVDFMAVSSYGNGMQSSGDVKILKDLDLSIKGKDVLIV 90 (166)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEEccCCHHHHHHHHHhcCCCceeeEEEEeeccCCCcccCceEEecCCCCCCCCCEEEEE
Confidence 467788888765444678999999999999988775443 2223222 2111 1111 123457899999999
Q ss_pred eccccchHhHHHHHHHHHHcCCCEEEEEEEe
Q 015926 308 DDLVQSGGTLIECQKVLAAHGAAKISAYVTH 338 (398)
Q Consensus 308 DDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH 338 (398)
|||+|||+|+.++++.|++.||++|+++|.+
T Consensus 91 DDii~TG~Tl~~~~~~l~~~g~~~i~~~~l~ 121 (166)
T TIGR01203 91 EDIVDTGLTLQYLLDLLKARKPKSLKIVTLL 121 (166)
T ss_pred eeeeCcHHHHHHHHHHHHHCCCCEEEEEEEE
Confidence 9999999999999999999999999999843
No 28
>PRK13812 orotate phosphoribosyltransferase; Provisional
Probab=99.26 E-value=1.1e-10 Score=107.38 Aligned_cols=110 Identities=16% Similarity=0.206 Sum_probs=81.8
Q ss_pred HHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCccEEEEeeCCC-CCCEEEEEeccccchHh
Q 015926 240 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQRIVRIKEGDP-RGRHIVIVDDLVQSGGT 316 (398)
Q Consensus 240 ~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~~~~~~~~g~v-~gk~viIVDDii~TG~T 316 (398)
...+++++.+... +.++|++|+.|++..+..++. +.|+.+.+|+++...... ...+++ +|++|+||||+++||+|
T Consensus 45 ~~~i~~~l~~~i~-~~d~ivg~~~ggi~lA~~lA~~l~~p~~~~rk~~k~yg~~~-~~~g~~~~g~~VlIVDDvitTG~T 122 (176)
T PRK13812 45 LRLIAEAFADRID-EDTKLAGVALGAVPLVAVTSVETGVPYVIARKQAKEYGTGN-RIEGRLDEGEEVVVLEDIATTGQS 122 (176)
T ss_pred HHHHHHHHHHHhc-cCCEEEEeecchHHHHHHHHHHHCCCEEEEeccCCcCCCCC-eEEecCCCcCEEEEEEEeeCCCHH
Confidence 5566666655432 236899999999999887653 678899999887543211 124566 89999999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhc
Q 015926 317 LIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQD 352 (398)
Q Consensus 317 l~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~ 352 (398)
+.++++.|+++||+.+.++|.--.- .+..+++++.
T Consensus 123 l~~~~~~l~~~Ga~vv~~~vlvdr~-~~~~~~l~~~ 157 (176)
T PRK13812 123 AVDAVEALREAGATVNRVLVVVDRE-EGARENLADH 157 (176)
T ss_pred HHHHHHHHHHCCCeEEEEEEEEECC-cchHHHHHhc
Confidence 9999999999999988888744332 3445666654
No 29
>PRK05793 amidophosphoribosyltransferase; Provisional
Probab=99.23 E-value=5.5e-11 Score=124.43 Aligned_cols=144 Identities=15% Similarity=0.149 Sum_probs=99.6
Q ss_pred HHHHHHHhCCCC-CCeEEEeeCCCchhhHHHhhc--CCCeEE-EEEEEc--------------CCccEE-EEeeCCCCCC
Q 015926 242 LLLNRLQQLPDS-DNISIAFPDDGAWKRFHKQLQ--HFPMIV-CNKVRD--------------GNQRIV-RIKEGDPRGR 302 (398)
Q Consensus 242 lLa~~L~~~~~~-~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v-~~K~R~--------------~~~~~~-~~~~g~v~gk 302 (398)
.+++.|.+.... .+.++..||. +...|..+++ +.|+.. +.|.|. ...+.. ....++++||
T Consensus 276 ~~G~~La~~~~~~~D~Vv~vPds-g~~~A~~~A~~lgip~~~~l~r~~~~~rtfi~~~q~~R~~~~~~k~~~~~~~v~gk 354 (469)
T PRK05793 276 RAGRQLYKEYPVDADIVIGVPDS-GIPAAIGYAEASGIPYGIGFIKNKYVGRTFIAPSQELRERAVRVKLNPLKVNVEGK 354 (469)
T ss_pred HHHHHHHHhcCCCCCEEEEcCcc-HHHHHHHHHHHhCCCEeeeEEEeeeccccccChhHhhhhhhheEecccCccccCCC
Confidence 445555443322 2456777775 4666666553 456632 123221 111111 1123568999
Q ss_pred EEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCC
Q 015926 303 HIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPP 382 (398)
Q Consensus 303 ~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k 382 (398)
+|+||||+|+||+|+.++++.|+++||++|+++++||.|..++...|..+ ..+++++.+--.-...+....+-
T Consensus 355 ~VlLVDD~ItTGtTl~~~~~~Lr~aGAk~V~~~~~~p~~~~p~~~gid~~-------~~~elia~~~~~~ei~~~~g~ds 427 (469)
T PRK05793 355 RVVLIDDSIVRGTTSKRLVELLRKAGAKEVHFRVSSPPVKYPCYFGIDTP-------YRKELIGANMSVEEIREMIGADS 427 (469)
T ss_pred EEEEEccccCchHHHHHHHHHHHHcCCCEEEEEEECCCcCcchhhhccCC-------ChhhEEEcCCCHHHHHHHhCCCe
Confidence 99999999999999999999999999999999999999999999999875 58999998742111123345678
Q ss_pred eEEEechHHHH
Q 015926 383 FEVLSLAGSIA 393 (398)
Q Consensus 383 ~~vlsva~liA 393 (398)
+..+|+..++.
T Consensus 428 l~~ls~~~l~~ 438 (469)
T PRK05793 428 LGYLSIEGLLE 438 (469)
T ss_pred EeccCHHHHHH
Confidence 89999988764
No 30
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=99.20 E-value=1.3e-10 Score=98.82 Aligned_cols=99 Identities=22% Similarity=0.306 Sum_probs=71.3
Q ss_pred hHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhcC--CCeEEEEEE----------EcCCcc--EEEEeeCCCCCCEE
Q 015926 239 AIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQH--FPMIVCNKV----------RDGNQR--IVRIKEGDPRGRHI 304 (398)
Q Consensus 239 a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~~--~~~~v~~K~----------R~~~~~--~~~~~~g~v~gk~v 304 (398)
....++++|.+. ..+...++++..||+..+..++.. .++.+..+. +..... ........++||+|
T Consensus 13 ~~~~la~~i~~~-~~~~~~ivgi~~~G~~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~v 91 (125)
T PF00156_consen 13 LAERLAEQIKES-GFDFDVIVGIPRGGIPLAAALARALGIPLVFVRKRKSYYPGSDKTSREKNNQELFIIDKEDIKGKRV 91 (125)
T ss_dssp HHHHHHHHHHHH-TTTSSEEEEETTTTHHHHHHHHHHHTHEEEEEEEEEEEESEEEEEEEETEEEEEEEEESSSGTTSEE
T ss_pred HHHHHHHHHHHh-CCCCCEEEeehhccHHHHHHHHHHhCCCccceeeeecccccchhhhhccCceEEeecccccccceeE
Confidence 456778888765 344556999999999988766543 333322221 111111 12234567899999
Q ss_pred EEEeccccchHhHHHHHHHHHHcCCCEEEEEEEe
Q 015926 305 VIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTH 338 (398)
Q Consensus 305 iIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH 338 (398)
+||||+++||+|+.++++.|++.|+++|.+++.|
T Consensus 92 liVDDvi~tG~Tl~~~~~~L~~~g~~~v~~~vl~ 125 (125)
T PF00156_consen 92 LIVDDVIDTGGTLKEAIELLKEAGAKVVGVAVLV 125 (125)
T ss_dssp EEEEEEESSSHHHHHHHHHHHHTTBSEEEEEEEE
T ss_pred EEEeeeEcccHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 9999999999999999999999999999999865
No 31
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=99.18 E-value=1.9e-10 Score=105.87 Aligned_cols=103 Identities=15% Similarity=0.271 Sum_probs=78.1
Q ss_pred hHHHHHHHHHhCCC--CCCeEEEeeCCCchhhHHHhhcC--CC--eEEEEEEEcCCc-----cE--EEEeeCCCCCCEEE
Q 015926 239 AIPLLLNRLQQLPD--SDNISIAFPDDGAWKRFHKQLQH--FP--MIVCNKVRDGNQ-----RI--VRIKEGDPRGRHIV 305 (398)
Q Consensus 239 a~~lLa~~L~~~~~--~~~~vVVaPD~Ga~~Ra~~~~~~--~~--~~v~~K~R~~~~-----~~--~~~~~g~v~gk~vi 305 (398)
....+|+.|.+.+. ..++++++++.||+.+++.+++. .+ +.+++..|.++. .. ......+++||+|+
T Consensus 17 ~i~~lA~~I~~~~~~~~~~~vvvgI~~Gg~~fa~~L~~~L~~~~~v~~l~~ssY~~~~~~~~~v~i~~~~~~~v~gk~VL 96 (178)
T PRK15423 17 RIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVL 96 (178)
T ss_pred HHHHHHHHHHHHhcccCCCeEEEEEecCChHHHHHHHHHhCCCcceeEEEEEEecCCCcccCceEEecCCCCCCCCCEEE
Confidence 46778888876543 24689999999999999987753 33 446677776421 11 11123479999999
Q ss_pred EEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCch
Q 015926 306 IVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNA 344 (398)
Q Consensus 306 IVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~ 344 (398)
|||||++||.||.++.+.|++.||++|.+++ ++.++
T Consensus 97 lVDDIiDTG~TL~~l~~~l~~~~~~~v~~av---L~~K~ 132 (178)
T PRK15423 97 IVEDIIDSGNTLSKVREILSLREPKSLAICT---LLDKP 132 (178)
T ss_pred EEeeecCchHHHHHHHHHHHhCCCCEEEEEE---EEECC
Confidence 9999999999999999999999999999998 55444
No 32
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=99.17 E-value=2.3e-10 Score=106.33 Aligned_cols=105 Identities=18% Similarity=0.223 Sum_probs=78.6
Q ss_pred hHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhcCC-----Ce--EEEEEEEcCCc-----cE--EE-EeeCCCCCCE
Q 015926 239 AIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHF-----PM--IVCNKVRDGNQ-----RI--VR-IKEGDPRGRH 303 (398)
Q Consensus 239 a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~~~-----~~--~v~~K~R~~~~-----~~--~~-~~~g~v~gk~ 303 (398)
....||+.|.+.+..++++++++..||+.+++.+++.+ ++ .+++..+.++. .. .. ....+++||+
T Consensus 20 ~i~~lA~~I~~~~~~~~~vivgi~~Gg~~fa~~L~~~L~~~~~~~~i~fi~~~sy~~~~~~~g~~~i~~~~~~~~v~gk~ 99 (189)
T PLN02238 20 RVAELAAQIASDYAGKSPVVLGVATGAFMFLADLVRAIQPLPRGLTVDFIRASSYGGGTESSGVAKVSGADLKIDVKGKH 99 (189)
T ss_pred HHHHHHHHHHHHcCCCCcEEEEEccCCHHHHHHHHHHhCccCCCeEEEEEEeeecCCCccccCceeEecCCCCCCCCCCE
Confidence 45668888877554456899999999999998876533 33 35665555321 11 11 1235789999
Q ss_pred EEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHH
Q 015926 304 IVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASW 346 (398)
Q Consensus 304 viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~ 346 (398)
|+|||||+|||.|+.++++.|++.||++|.++| ++.++..
T Consensus 100 VliVDDIidTG~Tl~~~~~~l~~~g~~~v~~av---L~dK~~~ 139 (189)
T PLN02238 100 VLLVEDIVDTGNTLSALVAHLEAKGAASVSVCA---LLDKRAR 139 (189)
T ss_pred EEEEecccchHHHHHHHHHHHHhCCCCEEEEEE---EEECCcc
Confidence 999999999999999999999999999999998 6666543
No 33
>PRK02304 adenine phosphoribosyltransferase; Provisional
Probab=99.17 E-value=3.8e-10 Score=103.16 Aligned_cols=97 Identities=20% Similarity=0.123 Sum_probs=72.1
Q ss_pred CCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCc------------cEEEEeeC--CCCCCEEEEEeccccchHhH
Q 015926 254 DNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQ------------RIVRIKEG--DPRGRHIVIVDDLVQSGGTL 317 (398)
Q Consensus 254 ~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~------------~~~~~~~g--~v~gk~viIVDDii~TG~Tl 317 (398)
+.++|++|+.|++..+..++. +.|+.+++|.++... .......+ .++|++|+||||++|||+|+
T Consensus 51 ~~d~Ivgv~~~Gi~~a~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~g~~VLIVDDivtTG~Tl 130 (175)
T PRK02304 51 DIDKIVGIEARGFIFGAALAYKLGIGFVPVRKPGKLPRETISESYELEYGTDTLEIHKDAIKPGDRVLIVDDLLATGGTL 130 (175)
T ss_pred CCCEEEEEccchHHHHHHHHHHhCCCEEEEEcCCCCCCceEeEEEecccCceEEEEchhhcCCCCEEEEEeCCccccHHH
Confidence 457899999999999886654 567777776654211 01111222 37899999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEEEeccCCchHHHHHh
Q 015926 318 IECQKVLAAHGAAKISAYVTHGIFPNASWERFK 350 (398)
Q Consensus 318 ~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~ 350 (398)
.++++.|+++||+.|.++|.+..-..++.+++.
T Consensus 131 ~~~~~~l~~~Ga~~v~v~vl~~~~~~~g~~~l~ 163 (175)
T PRK02304 131 EAAIKLLERLGAEVVGAAFVIELPDLGGREKLE 163 (175)
T ss_pred HHHHHHHHHcCCEEEEEEEEEEcccccchhhcC
Confidence 999999999999999999977664433455554
No 34
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=99.16 E-value=2.7e-10 Score=103.66 Aligned_cols=103 Identities=17% Similarity=0.275 Sum_probs=82.8
Q ss_pred hHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhcCC----CeEEEEEEEcCCc-------cEEEEeeCCCCCCEEEEE
Q 015926 239 AIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHF----PMIVCNKVRDGNQ-------RIVRIKEGDPRGRHIVIV 307 (398)
Q Consensus 239 a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~~~----~~~v~~K~R~~~~-------~~~~~~~g~v~gk~viIV 307 (398)
....+|++|.+.+..+++++|+...|++.+++++.+.. .+.++.-.+.++. ++...+..+++||+|+||
T Consensus 20 ri~ela~~I~~~y~g~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~kDld~di~grdVLiV 99 (178)
T COG0634 20 RIKELAAQITEDYGGKDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILKDLDEDIKGRDVLIV 99 (178)
T ss_pred HHHHHHHHHHHhhCCCceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEecccccCCCCCeEEEE
Confidence 46788999988777789999999999999999887643 2355555555432 223334678999999999
Q ss_pred eccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCch
Q 015926 308 DDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNA 344 (398)
Q Consensus 308 DDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~ 344 (398)
|||++||.||..+.+.|+.+||+++..++ ++.+.
T Consensus 100 eDIiDsG~TLs~i~~~l~~r~a~sv~i~t---LldK~ 133 (178)
T COG0634 100 EDIIDSGLTLSKVRDLLKERGAKSVRIAT---LLDKP 133 (178)
T ss_pred ecccccChhHHHHHHHHHhCCCCeEEEEE---EeeCc
Confidence 99999999999999999999999999998 65554
No 35
>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional
Probab=99.13 E-value=4.9e-10 Score=104.87 Aligned_cols=106 Identities=15% Similarity=0.173 Sum_probs=74.1
Q ss_pred HHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCc--c-E---EEEeeCCCCCCEEEEEeccc
Q 015926 240 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQ--R-I---VRIKEGDPRGRHIVIVDDLV 311 (398)
Q Consensus 240 ~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~--~-~---~~~~~g~v~gk~viIVDDii 311 (398)
+..+++.+... +.+..+|++++.||+.++..++. +.++.+.++.+.... . . .....++++||+|+||||++
T Consensus 72 ~~~la~~i~~~-~~~~D~Ivgi~~gG~~~A~~lA~~L~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~gk~VlIVDDVi 150 (200)
T PRK02277 72 ASAMADMLEKE-DEEVDVVVGIAKSGVPLATLVADELGKDLAIYHPKKWDHGEGEKKTGSFSRNFASVEGKRCVIVDDVI 150 (200)
T ss_pred HHHHHHHHHhc-CCCCCEEEeeccCCHHHHHHHHHHhCCCcEEEecccccccccccccceeccccccCCcCEEEEEeecc
Confidence 34555555322 23456899999999999887664 456666655542111 1 1 11123568999999999999
Q ss_pred cchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHH
Q 015926 312 QSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERF 349 (398)
Q Consensus 312 ~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l 349 (398)
|||+|+.++++.|+++||+.+.++| ++..+..+++
T Consensus 151 tTG~Tl~~ai~~l~~~Ga~~v~v~v---lvdk~g~~~~ 185 (200)
T PRK02277 151 TSGTTMKETIEYLKEHGGKPVAVVV---LIDKSGIDEI 185 (200)
T ss_pred CchHHHHHHHHHHHHcCCEEEEEEE---EEECcchhhh
Confidence 9999999999999999999999998 4444444443
No 36
>TIGR01090 apt adenine phosphoribosyltransferase. A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.
Probab=99.12 E-value=6.6e-10 Score=101.10 Aligned_cols=109 Identities=17% Similarity=0.207 Sum_probs=75.5
Q ss_pred HHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCC------------cc-EEEEe-eCCCCCCE
Q 015926 240 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGN------------QR-IVRIK-EGDPRGRH 303 (398)
Q Consensus 240 ~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~------------~~-~~~~~-~g~v~gk~ 303 (398)
...+++.+.+. +..+|++|+.+|+..+..++. +.++..++|.+... .. ..... ....+||+
T Consensus 35 ~~~la~~i~~~---~~d~ivgi~~~G~~~A~~la~~L~~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~ 111 (169)
T TIGR01090 35 IDLLVERYKDA---NIDYIVGPEARGFIFGAALAYKLGVGFVPVRKPGKLPGETISASYDLEYGKDQLEIHKDAIKPGQR 111 (169)
T ss_pred HHHHHHHhccC---CCCEEEeehhccHHHHHHHHHHHCCCEEEEEeCCCCCCceeeeEEeeccCceEEEEehhhcCCcCE
Confidence 45555555432 346899999999988876654 45666565543211 11 11111 12358999
Q ss_pred EEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhh
Q 015926 304 IVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQ 351 (398)
Q Consensus 304 viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~ 351 (398)
|+|||||+|||+|+.++++.|+++||+.|.+++.-..-..++.+++.+
T Consensus 112 VLIVDDIitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~g~~~i~~ 159 (169)
T TIGR01090 112 VLIVDDLLATGGTAEATDELIRKLGGEVVEAAFLIELKDLNGRAKLEP 159 (169)
T ss_pred EEEEeccccchHHHHHHHHHHHHcCCEEEEEEEEEEccccChHHHhcc
Confidence 999999999999999999999999999999988655544455666654
No 37
>PRK13809 orotate phosphoribosyltransferase; Provisional
Probab=99.12 E-value=6e-10 Score=104.89 Aligned_cols=111 Identities=16% Similarity=0.145 Sum_probs=79.5
Q ss_pred HHHHHHHHhCC-CCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCccE-EEEeeCC-CCCCEEEEEeccccchH
Q 015926 241 PLLLNRLQQLP-DSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQRI-VRIKEGD-PRGRHIVIVDDLVQSGG 315 (398)
Q Consensus 241 ~lLa~~L~~~~-~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~~~-~~~~~g~-v~gk~viIVDDii~TG~ 315 (398)
..+++.+.+.. +.+.++|++|+.+|+.++..++. +.|+.+.+|.++..... .....+. .+|++|+||||++|||+
T Consensus 53 ~~i~~~l~~~~~~~~~d~IvG~~~~Gi~~A~~vA~~l~~p~~~~RK~~K~~G~~~~~~~~g~~~~g~~VlIVDDViTTG~ 132 (206)
T PRK13809 53 QTIATLIWRLRPSFNSSLLCGVPYTALTLATSISLKYNIPMVLRRKELKNVDPSDAIKVEGLFTPGQTCLVINDMVSSGK 132 (206)
T ss_pred HHHHHHHHHHhccCCCCEEEEecCccHHHHHHHHHHhCCCEEEEeCCCCCCCCcCEEEEccccCCCCEEEEEEeccccCH
Confidence 34444444322 23457899999999999887653 57888888877654321 1112343 58999999999999999
Q ss_pred hHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhc
Q 015926 316 TLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQD 352 (398)
Q Consensus 316 Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~ 352 (398)
|+.++++.|+++|+..+.++|.-... .++.+++.+.
T Consensus 133 Ti~~a~~~L~~~G~~vv~v~vlvdr~-~~~~~~l~~~ 168 (206)
T PRK13809 133 SIIETAVALEEEGLVVREALVFLDRQ-KGACQPLGPQ 168 (206)
T ss_pred HHHHHHHHHHHCCCEEEEEEEEEECc-ccHHHHHHhc
Confidence 99999999999999988887744432 3667777654
No 38
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=99.11 E-value=4.6e-10 Score=102.86 Aligned_cols=99 Identities=18% Similarity=0.204 Sum_probs=71.6
Q ss_pred hHHHHHHHHHhCC-CCCCeEEEeeCCCchhhHHHhhcCC--------CeEEEEEE--EcCC-----ccEE--EEeeCCCC
Q 015926 239 AIPLLLNRLQQLP-DSDNISIAFPDDGAWKRFHKQLQHF--------PMIVCNKV--RDGN-----QRIV--RIKEGDPR 300 (398)
Q Consensus 239 a~~lLa~~L~~~~-~~~~~vVVaPD~Ga~~Ra~~~~~~~--------~~~v~~K~--R~~~-----~~~~--~~~~g~v~ 300 (398)
....||+++.+.+ +.+++++++++.||+.+++.++..+ ++.+++.. |... .... ....++++
T Consensus 15 ~i~~la~~i~~~~~~~~~~viv~il~gG~~~a~~La~~L~~~~~~~~~~~~l~~~~y~~~~~~~~~~~~~~~~~l~~~v~ 94 (176)
T PRK05205 15 ALTRIAHEIIERNKGLDNLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDLTKKGLHPQVKPTDIPFDIE 94 (176)
T ss_pred HHHHHHHHHHHHcCCCCCeEEEEEccCCHHHHHHHHHHHHHHcCCCCccceEEEEEeecCccccCcccccccccCCCCCC
Confidence 4567788887643 2357899999999999987665322 24444433 3221 1111 12345799
Q ss_pred CCEEEEEeccccchHhHHHHHHHHHHcC-CCEEEEEEE
Q 015926 301 GRHIVIVDDLVQSGGTLIECQKVLAAHG-AAKISAYVT 337 (398)
Q Consensus 301 gk~viIVDDii~TG~Tl~~aa~~Lk~~G-A~~V~~~~T 337 (398)
||+|+|||||+|||+|+.++++.|++.| +++|.+++.
T Consensus 95 gr~VLIVDDIidTG~Tl~~~~~~L~~~G~~~~v~~avL 132 (176)
T PRK05205 95 GKRVILVDDVLYTGRTIRAALDALFDYGRPARVQLAVL 132 (176)
T ss_pred CCEEEEEecccCcHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 9999999999999999999999999999 789988884
No 39
>PRK12560 adenine phosphoribosyltransferase; Provisional
Probab=99.09 E-value=1.9e-09 Score=100.07 Aligned_cols=125 Identities=16% Similarity=0.138 Sum_probs=84.1
Q ss_pred HHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCc------c------EE--EEeeCCCCCCEEEE
Q 015926 243 LLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQ------R------IV--RIKEGDPRGRHIVI 306 (398)
Q Consensus 243 La~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~------~------~~--~~~~g~v~gk~viI 306 (398)
+++.+.+..+.+..+|++|+.+++.++..++. +.|+.+.+|.|.... . .. ....+..+|++|+|
T Consensus 40 ~~~~l~~~~~~~~D~Ivg~e~~Gi~lA~~vA~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~G~rVlI 119 (187)
T PRK12560 40 TAKEIIKYIDKDIDKIVTEEDKGAPLATPVSLLSGKPLAMARWYPYSLSELNYNVVEIGSEYFEGVVYLNGIEKGDRVAI 119 (187)
T ss_pred HHHHHHHHhCCCCCEEEEEccccHHHHHHHHHhhCCCEEEeccCCCcccceeEEeeeeeccceeeeeEccCCCCcCEEEE
Confidence 33344333333456899999999999876553 568888877664321 0 00 11234568999999
Q ss_pred EeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcc
Q 015926 307 VDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCP 371 (398)
Q Consensus 307 VDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip 371 (398)
|||+++||+|+.++++.|+++||..+.++|.-..-..++.+.+.+. .|. ++..++..+..+
T Consensus 120 VDDvitTG~T~~~ai~ll~~aGa~vv~v~~vvd~~~~~g~~~l~~~-~gv---~v~sl~~~~~~~ 180 (187)
T PRK12560 120 IDDTLSTGGTVIALIKAIENSGGIVSDVICVIEKTQNNGRKKLFTQ-TGI---NVKSLVKIDVKP 180 (187)
T ss_pred EEeccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccchHHHHhhc-cCC---cEEEEEEEEEec
Confidence 9999999999999999999999998888875444333556777432 122 356666555443
No 40
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=99.07 E-value=1.6e-09 Score=102.03 Aligned_cols=97 Identities=15% Similarity=0.189 Sum_probs=79.0
Q ss_pred CCeEEEeeCCCchhhHHHhhcC---CCeEEEEEEEcCCc-c-E--EEEeeCCCCCCEEEEEeccccchHhHHHHHHHHHH
Q 015926 254 DNISIAFPDDGAWKRFHKQLQH---FPMIVCNKVRDGNQ-R-I--VRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAA 326 (398)
Q Consensus 254 ~~~vVVaPD~Ga~~Ra~~~~~~---~~~~v~~K~R~~~~-~-~--~~~~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~ 326 (398)
+++++|+++.||..++..+++. .++.++.++|.... . . ...+..+++||+|+|||||++||+|+..+++.|++
T Consensus 70 ~~~vvV~IlrgG~~~~~~l~~~l~~~~~~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl~~ai~~L~~ 149 (209)
T PRK00129 70 KKLVIVPILRAGLGMVDGVLKLIPSARVGHIGLYRDEETLEPVEYYVKLPEDIDERTVIVVDPMLATGGSAIAAIDLLKK 149 (209)
T ss_pred CeEEEEEEeCCCHHHHHHHHHhCCcCeeeeEEEEeCCCCCCCEEEEeeCCCcCCCCEEEEECCcccchHHHHHHHHHHHH
Confidence 4589999999999998876643 34566777786432 1 1 12235689999999999999999999999999999
Q ss_pred cCCCEEEEEEEeccCCchHHHHHhhc
Q 015926 327 HGAAKISAYVTHGIFPNASWERFKQD 352 (398)
Q Consensus 327 ~GA~~V~~~~TH~~~s~~a~~~l~~~ 352 (398)
+|+++|.++++ ++++.+++++.+.
T Consensus 150 ~G~~~I~~~~l--l~~~~gl~~l~~~ 173 (209)
T PRK00129 150 RGAKNIKVLCL--VAAPEGIKALEEA 173 (209)
T ss_pred cCCCEEEEEEE--ecCHHHHHHHHHH
Confidence 99999999996 7888999999876
No 41
>PRK00455 pyrE orotate phosphoribosyltransferase; Validated
Probab=99.06 E-value=3.5e-09 Score=99.02 Aligned_cols=110 Identities=19% Similarity=0.256 Sum_probs=77.8
Q ss_pred HHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCccEEEEeeCCCCCCEEEEEeccccchHhH
Q 015926 240 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTL 317 (398)
Q Consensus 240 ~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~~~~~~~~g~v~gk~viIVDDii~TG~Tl 317 (398)
...+++.+.+.. .+..+|++++.||+..+..++. +.++.+.+|.++.............+|++|+||||+++||+|+
T Consensus 51 ~~~la~~i~~~~-~~~d~Ivgi~~gG~~~A~~la~~L~~~~~~~rk~~~~~g~~~~~~~~~~~g~~VliVDDvi~tG~Tl 129 (202)
T PRK00455 51 GRFLAEAIKDSG-IEFDVVAGPATGGIPLAAAVARALDLPAIFVRKEAKDHGEGGQIEGRRLFGKRVLVVEDVITTGGSV 129 (202)
T ss_pred HHHHHHHHHhcC-CCCCEEEecccCcHHHHHHHHHHhCCCEEEEecccCCCCCCceEEccCCCCCEEEEEecccCCcHHH
Confidence 455566665432 2445899999999999887664 5677787776643321111112345799999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhh
Q 015926 318 IECQKVLAAHGAAKISAYVTHGIFPNASWERFKQ 351 (398)
Q Consensus 318 ~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~ 351 (398)
.++++.|++.||+.+.++|....- .+..+++++
T Consensus 130 ~~~~~~l~~~Ga~~v~~~vlv~~~-~~~~~~~~~ 162 (202)
T PRK00455 130 LEAVEAIRAAGAEVVGVAVIVDRQ-SAAQEVFAD 162 (202)
T ss_pred HHHHHHHHHcCCEEEEEEEEEECc-chHHHHHHh
Confidence 999999999999999998855542 233455554
No 42
>TIGR00336 pyrE orotate phosphoribosyltransferase. The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme.
Probab=99.05 E-value=2.1e-09 Score=98.26 Aligned_cols=109 Identities=16% Similarity=0.184 Sum_probs=77.4
Q ss_pred HHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCC-----eEEEEEEEcCCccEEEEeeCCC-CCCEEEEEeccc
Q 015926 240 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFP-----MIVCNKVRDGNQRIVRIKEGDP-RGRHIVIVDDLV 311 (398)
Q Consensus 240 ~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~-----~~v~~K~R~~~~~~~~~~~g~v-~gk~viIVDDii 311 (398)
..++++.+... .+..+|++|+.|++..+..++. +.+ +.+.+|+++...... ...+.+ +|++|+||||++
T Consensus 42 ~~~~~~~~~~~--~~~d~Ivg~~~gG~~~A~~la~~l~~~~~~~~~~~~rk~~k~~g~~~-~~~g~~~~g~~VlIVDDvi 118 (173)
T TIGR00336 42 ARYAAAIIKSH--LEFDVIAGPALGGIPIATAVSVKLAKPGGDIPLCFNRKEAKDHGEGG-NIEGELLEGDKVVVVEDVI 118 (173)
T ss_pred HHHHHHHHHhc--CCCCEEEccccChHHHHHHHHHHhcCcCCCceEEEEcCCcccCCCCC-ceecCCCCCCEEEEEeccc
Confidence 34444444432 3567899999999998876553 456 677777765433211 123444 799999999999
Q ss_pred cchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhh
Q 015926 312 QSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQ 351 (398)
Q Consensus 312 ~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~ 351 (398)
+||+|+.++++.|++.||+.+.++|.-..-..++.+++.+
T Consensus 119 ~TG~Tl~~a~~~l~~~Ga~v~~~~vlvdr~~~~~~~~l~~ 158 (173)
T TIGR00336 119 TTGTSILEAVEIIQAAGGQVAGVIIAVDRQERSAGQEFEK 158 (173)
T ss_pred cChHHHHHHHHHHHHcCCeEEEEEEEEecCchhHHHHHHH
Confidence 9999999999999999999888887444332246777765
No 43
>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family. This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species.
Probab=99.04 E-value=2.2e-09 Score=99.57 Aligned_cols=97 Identities=16% Similarity=0.178 Sum_probs=71.4
Q ss_pred hHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCccEEEEee-CCCCCCEEEEEeccccchH
Q 015926 239 AIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQRIVRIKE-GDPRGRHIVIVDDLVQSGG 315 (398)
Q Consensus 239 a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~~~~~~~~-g~v~gk~viIVDDii~TG~ 315 (398)
.+..+++++... +.+.++|++++.||+..+..++. +.++.+.+|.+ +... .... .-.+||+|+|||||+|||+
T Consensus 44 ~~~~La~~i~~~-~~~~d~Ivgi~~gGi~~A~~la~~L~~~~i~~~k~~-~~~~--~~~~~~l~~G~~VLIVDDIi~TG~ 119 (187)
T TIGR01367 44 LGGELAQKILDY-GLKVDFIVGPAMGGVILGYEVARQLSVRSIFAEREG-GGMK--LRRGFAVKPGEKFVAVEDVVTTGG 119 (187)
T ss_pred HHHHHHHHHHHh-CCCCCEEEEEccCcHHHHHHHHHHhCCCeEEEEEeC-CcEE--EeecccCCCCCEEEEEEeeecchH
Confidence 456667777543 33567899999999999987765 45666665544 2111 1111 1247999999999999999
Q ss_pred hHHHHHHHHHHcCCCEEEEEEEec
Q 015926 316 TLIECQKVLAAHGAAKISAYVTHG 339 (398)
Q Consensus 316 Tl~~aa~~Lk~~GA~~V~~~~TH~ 339 (398)
|+.++++.|+++||+.|.+++...
T Consensus 120 Tl~~a~~~l~~~Ga~vv~~~vlid 143 (187)
T TIGR01367 120 SLLEAIRAIEGQGGQVVGLACIID 143 (187)
T ss_pred HHHHHHHHHHHcCCeEEEEEEEEE
Confidence 999999999999999998887443
No 44
>PRK07322 adenine phosphoribosyltransferase; Provisional
Probab=99.04 E-value=2.9e-09 Score=97.92 Aligned_cols=96 Identities=19% Similarity=0.302 Sum_probs=68.3
Q ss_pred HHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCC--cc----E---------EEEe----eCCC
Q 015926 241 PLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGN--QR----I---------VRIK----EGDP 299 (398)
Q Consensus 241 ~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~--~~----~---------~~~~----~g~v 299 (398)
..+++.|.+....+..+|++++.|++..+..++. +.++.+.+|.+... .. . .... ..++
T Consensus 39 ~~~~~~La~~l~~~~d~Iv~v~~gGiplA~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (178)
T PRK07322 39 EAAAEALAKRLPTEVDVLVTPETKGIPLAHALSRRLGKPYVVARKSRKPYMQDPIIQEVVSITTGKPQLLVLDGADAEKL 118 (178)
T ss_pred HHHHHHHHHHcCCCCCEEEEeccCCHHHHHHHHHHHCCCEEEEEEeCCCCCCCceEEEEEEEEeccceEEEecCcccccc
Confidence 3444444443322456899999999999876653 56776666665421 00 0 0011 1246
Q ss_pred CCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEE
Q 015926 300 RGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYV 336 (398)
Q Consensus 300 ~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~ 336 (398)
+||+|+||||+++||+|+.++++.|+++||+.|.+++
T Consensus 119 ~gk~VLIVDDiitTG~Tl~aa~~~L~~~GA~~V~~~~ 155 (178)
T PRK07322 119 KGKRVAIVDDVVSTGGTLTALERLVERAGGQVVAKAA 155 (178)
T ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEE
Confidence 8999999999999999999999999999999999887
No 45
>PRK07272 amidophosphoribosyltransferase; Provisional
Probab=99.00 E-value=4.2e-10 Score=118.05 Aligned_cols=92 Identities=17% Similarity=0.266 Sum_probs=72.3
Q ss_pred eCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccc
Q 015926 296 EGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVK 375 (398)
Q Consensus 296 ~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~ 375 (398)
...++||+|+||||++|||.|+.++++.|+++||++|.++++||.+..++.--|... ..++++..+.-.....
T Consensus 345 ~~~~~gk~vllVDDvittG~T~~~~~~~L~~~Ga~~v~~~~~~p~~~~~c~ygid~~-------~~~~lia~~~~~~ei~ 417 (484)
T PRK07272 345 SGVVKGKRVVMVDDSIVRGTTSRRIVQLLKEAGAKEVHVAIASPELKYPCFYGIDIQ-------TRRELISANHSVEEIC 417 (484)
T ss_pred ccccCCCEEEEEccccCchHHHHHHHHHHHhcCCcEEEEEEeCCccccChhhhccCc-------CHHHHHhcCCCHHHHH
Confidence 457899999999999999999999999999999999999999999999887777654 3555555443211112
Q ss_pred cccCCCCeEEEechHHHHh
Q 015926 376 EVMSKPPFEVLSLAGSIAS 394 (398)
Q Consensus 376 ~~~~~~k~~vlsva~liAe 394 (398)
+....+-+.++|+..++.-
T Consensus 418 ~~~~~dsl~~~~~~~l~~~ 436 (484)
T PRK07272 418 DIIGADSLTYLSVDGLIES 436 (484)
T ss_pred HHhCCCEEEEecHHHHHHH
Confidence 3345678999999888653
No 46
>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional
Probab=98.98 E-value=3.2e-09 Score=102.15 Aligned_cols=103 Identities=17% Similarity=0.235 Sum_probs=76.0
Q ss_pred hHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhcCCC-------------e---EEEEEEEcCCc------cEEEEee
Q 015926 239 AIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFP-------------M---IVCNKVRDGNQ------RIVRIKE 296 (398)
Q Consensus 239 a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~~~~-------------~---~v~~K~R~~~~------~~~~~~~ 296 (398)
....||++|.+.+..+++++++...||+.+++++++.+. . .+++-.+.++. .+.....
T Consensus 66 rI~~LA~~I~~dy~~~~~vilgILkGg~~FaadL~~~L~~~~~~~~~~~~~~~~~~dfi~vsSY~~~~s~g~v~i~~~~~ 145 (241)
T PTZ00149 66 RVEKLAYDIKQVYGNEELHILCILKGSRGFFSALVDYLNRIHNYSSTESPKPPYQEHYVRVKSYCNDESTGKLEIVSDDL 145 (241)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEECCCCHHHHHHHHHHHhhhhhccccccCcccccccEEEEEEccCCCcCCceEEecccc
Confidence 467888888886666789999999999998887553221 1 33333332221 1111224
Q ss_pred CCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCch
Q 015926 297 GDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNA 344 (398)
Q Consensus 297 g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~ 344 (398)
.+++||+|+|||||+|||.|+.++++.|++.|+++|.+++ ++.+.
T Consensus 146 ~~l~gk~VLIVDDIidTG~Tl~~~~~~L~~~g~~~V~va~---L~~K~ 190 (241)
T PTZ00149 146 SCLKDKHVLIVEDIIDTGNTLVKFCEYLKKFEPKTIRIAT---LFEKR 190 (241)
T ss_pred cccCCCEEEEEEeEeChHHHHHHHHHHHHhcCCCEEEEEE---EEecC
Confidence 4789999999999999999999999999999999999998 55444
No 47
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=98.95 E-value=4.3e-09 Score=99.46 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=75.6
Q ss_pred hHHHHHHHHHhCCC------CCCeEEEeeCCCchhhHHHhhcC-----CC--eEEEEEEEcCC--c---c--EEEEeeCC
Q 015926 239 AIPLLLNRLQQLPD------SDNISIAFPDDGAWKRFHKQLQH-----FP--MIVCNKVRDGN--Q---R--IVRIKEGD 298 (398)
Q Consensus 239 a~~lLa~~L~~~~~------~~~~vVVaPD~Ga~~Ra~~~~~~-----~~--~~v~~K~R~~~--~---~--~~~~~~g~ 298 (398)
....||++|.+.+. .+++++++...||+..++.+.+. .+ +.+++-.+.++ . . +......+
T Consensus 36 ~i~~LA~~I~~~~~~~~~~~~~~~vivgVlkGg~~fa~dL~r~L~~~~~~~~vdfi~vssY~~~~~s~g~~~i~~~~~~~ 115 (211)
T PTZ00271 36 ATAKCAKKIAEDYRSFKLTTENPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGTGVETSGQVRMLLDVRDS 115 (211)
T ss_pred HHHHHHHHHHHHhhhccccCCCCeEEEEEcCCCHHHHHHHHHHhcccCCCeeEEEEEEEecCCCCcccCceEEecCCCCC
Confidence 56778888877543 24678999999999999887543 23 34443333321 1 1 11122457
Q ss_pred CCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCch
Q 015926 299 PRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNA 344 (398)
Q Consensus 299 v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~ 344 (398)
++||+|||||||++||.||..+.+.|++.|+++|..++ ++.+.
T Consensus 116 i~gk~VLIVDDIvDTG~TL~~v~~~l~~~~p~svk~av---L~dK~ 158 (211)
T PTZ00271 116 VENRHILIVEDIVDSAITLQYLMRFMLAKKPASLKTVV---LLDKP 158 (211)
T ss_pred CCCCEEEEEecccCCHHHHHHHHHHHHhcCCCEEEEEE---EEEcc
Confidence 99999999999999999999999999999999999998 55553
No 48
>COG0461 PyrE Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=98.95 E-value=1.2e-08 Score=95.47 Aligned_cols=96 Identities=23% Similarity=0.324 Sum_probs=71.9
Q ss_pred CCeEEEeeCCCchhhHHHhhcCC---C-eEEEEEEEcCCccEEEEeeCCCCCCEEEEEeccccchHhHHHHHHHHHHcCC
Q 015926 254 DNISIAFPDDGAWKRFHKQLQHF---P-MIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGA 329 (398)
Q Consensus 254 ~~~vVVaPD~Ga~~Ra~~~~~~~---~-~~v~~K~R~~~~~~~~~~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA 329 (398)
+-.+|++|..||++.+..++..+ + +.+.+|+.++.+.......+..+|++|+||||++|||+++.++++.|+++|+
T Consensus 61 ~~d~v~G~a~ggiP~A~~~a~~l~~~~~~~~~Rke~K~hG~~~~ieG~~~~G~kVvvVEDViTTG~Si~eai~~l~~~G~ 140 (201)
T COG0461 61 EFDVVAGPALGGIPLAAATALALAHLPPMAYVRKEAKDHGTGGLIEGGEVKGEKVVVVEDVITTGGSILEAVEALREAGA 140 (201)
T ss_pred CCcEEEeccccchHHHHHHHHHhccCCcEEEEeceeccCCCcceeEecCCCCCEEEEEEecccCCHhHHHHHHHHHHcCC
Confidence 56789999999999988766443 3 6677887665543222223445899999999999999999999999999999
Q ss_pred CEEEEEEEeccCCc--hHHHHHhhc
Q 015926 330 AKISAYVTHGIFPN--ASWERFKQD 352 (398)
Q Consensus 330 ~~V~~~~TH~~~s~--~a~~~l~~~ 352 (398)
..+.++| ++.. ++.+.+.+.
T Consensus 141 ~V~gv~~---ivDR~~~~~~~~~~~ 162 (201)
T COG0461 141 EVVGVAV---IVDRQSGAKEVLKEY 162 (201)
T ss_pred eEEEEEE---EEecchhHHHHHHhc
Confidence 9877776 3333 445666553
No 49
>PRK13810 orotate phosphoribosyltransferase; Provisional
Probab=98.91 E-value=2.4e-08 Score=92.79 Aligned_cols=107 Identities=20% Similarity=0.181 Sum_probs=78.0
Q ss_pred HHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhh--cCCCeEEEEEEEcCCccEEEEeeCC-CCCCEEEEEeccccchHhH
Q 015926 241 PLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQL--QHFPMIVCNKVRDGNQRIVRIKEGD-PRGRHIVIVDDLVQSGGTL 317 (398)
Q Consensus 241 ~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~--~~~~~~v~~K~R~~~~~~~~~~~g~-v~gk~viIVDDii~TG~Tl 317 (398)
..+++.+.. .+-..|++|..+|+..+..++ .+.|++++||..+....... ..+. .+|++|+||||++|||+|+
T Consensus 63 ~~la~~~~~---~~~d~I~g~~~~GiplA~~vA~~l~~p~v~vRK~~k~~g~~~~-~~g~~~~g~rVlIVDDVitTGgS~ 138 (187)
T PRK13810 63 RQAALRIKE---MDVDTVAGVELGGVPLATAVSLETGLPLLIVRKSVKDYGTGSR-FVGDLKPEDRIVMLEDVTTSGGSV 138 (187)
T ss_pred HHHHHHhcc---CCCCEEEEEccchHHHHHHHHHHhCCCEEEEecCCCccCCCce-EEccCCCcCEEEEEEeccCCChHH
Confidence 344444433 244679999999999877554 36788888887654432111 2344 3799999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhc
Q 015926 318 IECQKVLAAHGAAKISAYVTHGIFPNASWERFKQD 352 (398)
Q Consensus 318 ~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~ 352 (398)
.++++.+++.|+.-+.+++.-..- .++.++|.+.
T Consensus 139 ~~~i~~l~~~Ga~V~~v~vlvdr~-~g~~~~l~~~ 172 (187)
T PRK13810 139 REAIEVVREAGAYIKYVITVVDRE-EGAEENLKEA 172 (187)
T ss_pred HHHHHHHHHCCCEEEEEEEEEECC-cChHHHHHHc
Confidence 999999999999988887755543 4677888654
No 50
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=98.89 E-value=1.5e-08 Score=95.30 Aligned_cols=97 Identities=16% Similarity=0.226 Sum_probs=77.3
Q ss_pred CCeEEEeeCCCchhhHHHhhcC---CCeEEEEEEEcCCc-c-E--EEEeeCCCCCCEEEEEeccccchHhHHHHHHHHHH
Q 015926 254 DNISIAFPDDGAWKRFHKQLQH---FPMIVCNKVRDGNQ-R-I--VRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAA 326 (398)
Q Consensus 254 ~~~vVVaPD~Ga~~Ra~~~~~~---~~~~v~~K~R~~~~-~-~--~~~~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~ 326 (398)
+++++|+...||..++..+++. .++.++.++|.... . . ...+..+++||+|+|||||++||+|+..+++.|++
T Consensus 68 ~~i~~V~ILrgg~~~~~~l~~~l~~~~v~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl~~ai~~L~~ 147 (207)
T TIGR01091 68 KKIVLVPILRAGLGMVDGVLKLIPEAKVGHVGAYRNEETLKPVPYYSKLPEDIDERTVIVLDPMLATGGTMIAALDLLKK 147 (207)
T ss_pred CcEEEEEEeCCcHHHHHHHHHhCCcCceeEEEEEeCCCCCCCEEEEecCCCCCCCCEEEEECCCccchHHHHHHHHHHHH
Confidence 4578899999999998776643 34566677775432 1 1 11234579999999999999999999999999999
Q ss_pred cCCCEEEEEEEeccCCchHHHHHhhc
Q 015926 327 HGAAKISAYVTHGIFPNASWERFKQD 352 (398)
Q Consensus 327 ~GA~~V~~~~TH~~~s~~a~~~l~~~ 352 (398)
.|+++|.+++. +.++.+++++.+.
T Consensus 148 ~G~~~I~v~~l--l~~~~gl~~l~~~ 171 (207)
T TIGR01091 148 RGAKKIKVLSI--VAAPEGIEAVEKA 171 (207)
T ss_pred cCCCEEEEEEE--ecCHHHHHHHHHH
Confidence 99999999985 7888999999875
No 51
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=98.88 E-value=3e-08 Score=92.78 Aligned_cols=121 Identities=20% Similarity=0.244 Sum_probs=92.2
Q ss_pred hHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCe--EEEEEEEcC-C-----------ccEE----------
Q 015926 239 AIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPM--IVCNKVRDG-N-----------QRIV---------- 292 (398)
Q Consensus 239 a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~--~v~~K~R~~-~-----------~~~~---------- 292 (398)
+-..||+.|.+..+.++.++.+.-.||+.-+.++++ +.++ .+++|.-.. + +.+.
T Consensus 10 AGr~La~~l~~~~~~~~~iVlaLpRGGvpva~evA~~lga~ldvliVrKiG~P~n~E~aiGAvae~g~~v~n~~~~~~~~ 89 (220)
T COG1926 10 AGRKLAQELAALRDLKDVIVLALPRGGVPVAFEVAQALGAPLDVLIVRKIGAPGNPELAIGAVAEGGDVVLNYDVVRSLG 89 (220)
T ss_pred HHHHHHHHHHhhccCCCcEEEEecCCCchHHHHHHHHhCCCeeEEEEeecCCCCCchhceeeeccCCcEecchhhhhhcc
Confidence 567789999886545667788888899998877664 4444 445553210 0 0000
Q ss_pred --------------------------EEeeCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHH
Q 015926 293 --------------------------RIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASW 346 (398)
Q Consensus 293 --------------------------~~~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~ 346 (398)
..-..+++||+||||||-+.||.||..+++.+++.|+++|++++ |+++.++.
T Consensus 90 i~~~~i~~~~~~e~~El~rrr~~yr~~~~~~~~~g~~VIlVDDGiATGatm~aAi~~~r~~~~~~IviAV--PV~p~~a~ 167 (220)
T COG1926 90 IDDAYIEAAAARERKELLRRREAYRGGRPVPSLKGRTVILVDDGIATGATMKAAVRALRAKGPKEIVIAV--PVAPEDAA 167 (220)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEEeCCcchhHHHHHHHHHHHhcCCceEEEEc--ccCCHHHH
Confidence 00023689999999999999999999999999999999999999 99999999
Q ss_pred HHHhhcCCCCCCCCccEEEEccC
Q 015926 347 ERFKQDTGGKPESGLTYFWISDS 369 (398)
Q Consensus 347 ~~l~~~~~~~~~~~~~~iv~tdt 369 (398)
+.|... .++++|..+
T Consensus 168 ~~l~s~--------~D~vvc~~~ 182 (220)
T COG1926 168 AELESE--------ADEVVCLYM 182 (220)
T ss_pred HHHHhh--------cCeEEEEcC
Confidence 999874 799999885
No 52
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=98.87 E-value=3.5e-08 Score=91.94 Aligned_cols=126 Identities=10% Similarity=0.014 Sum_probs=83.9
Q ss_pred HHHHHHHHHhCC-CCCCeEEEeeCCCchhhHHHhh--cCCCeEEEEEEEcCCc-----c-----------EEEEeeC-CC
Q 015926 240 IPLLLNRLQQLP-DSDNISIAFPDDGAWKRFHKQL--QHFPMIVCNKVRDGNQ-----R-----------IVRIKEG-DP 299 (398)
Q Consensus 240 ~~lLa~~L~~~~-~~~~~vVVaPD~Ga~~Ra~~~~--~~~~~~v~~K~R~~~~-----~-----------~~~~~~g-~v 299 (398)
...+++.+.+.+ +.+..+|++|+.+++..+..++ .+.|+++++|..+... . ......+ .+
T Consensus 35 l~~v~~~l~~~~~~~~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v~vRK~~k~~~~~~~~~~~~~s~~~~~~~~l~i~~~~l 114 (191)
T TIGR01744 35 MQEVGEEFARRFADDGITKIVTIEASGIAPAIMTGLKLGVPVVFARKKKPLTLTDNLLTASVHSFTKQTTSTVAVSGEFL 114 (191)
T ss_pred HHHHHHHHHHHhccCCCCEEEEEccccHHHHHHHHHHHCCCEEEEEeCCCCCCCCcceEEEEEEeecCccEEEEEEHHhC
Confidence 344444444432 2344688999999999877554 3688889988764221 0 0011223 23
Q ss_pred -CCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCc
Q 015926 300 -RGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSC 370 (398)
Q Consensus 300 -~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdti 370 (398)
+|++|+||||+++||+|+.++++.++++||.-+.++|.-..-..+..+++.+. |. ++..++..+.+
T Consensus 115 ~~G~rVLIVDDvvtTGgT~~a~~~ll~~aGa~Vvgv~~lvd~~~~~g~~~l~~~--gv---pv~sL~~~~~l 181 (191)
T TIGR01744 115 SDQDRVLIIDDFLANGQAAHGLVDIAKQAGAKIAGIGIVIEKSFQNGRQELVEL--GY---RVESLARIQSL 181 (191)
T ss_pred CCcCEEEEEEehhccChHHHHHHHHHHHCCCEEEEEEEEEEecCccHHHHHHhc--CC---cEEEEEEEeeE
Confidence 79999999999999999999999999999998888874433223467777653 22 35566655544
No 53
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=98.83 E-value=7.6e-08 Score=89.57 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=78.8
Q ss_pred CCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCc--cE--------------EEEee-CCC-CCCEEEEEeccccc
Q 015926 254 DNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQ--RI--------------VRIKE-GDP-RGRHIVIVDDLVQS 313 (398)
Q Consensus 254 ~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~--~~--------------~~~~~-g~v-~gk~viIVDDii~T 313 (398)
+..+|++|+.+|+..+..++. +.|+++++|..+... .. ...+. ..+ +|++|+||||+++|
T Consensus 50 ~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vRK~~k~~~~~~~~~~~~~~~~~~~~~~l~i~~~~i~~G~rVlIVDDviaT 129 (189)
T PRK09219 50 GITKILTIEASGIAPAVMAALALGVPVVFAKKKKSLTLTDDVYTATVYSFTKQVTSTVSVSKKFLSEGDRVLIIDDFLAN 129 (189)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEEECCCCCCCCceEEEEEeeeccCceEEEEEEhhhCCCCCEEEEEeehhhc
Confidence 446899999999999876553 678989988765321 10 00111 223 79999999999999
Q ss_pred hHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCccc
Q 015926 314 GGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPV 372 (398)
Q Consensus 314 G~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~ 372 (398)
|+|+.++++.++++||.-+.+++.-..-..+..+++.+. |. ++..++..+.++.
T Consensus 130 GgT~~a~~~lv~~aGa~vvgv~~lvd~~~~~g~~~l~~~--g~---~~~sl~~~~~~~~ 183 (189)
T PRK09219 130 GQAALGLIDIIEQAGAKVAGIGIVIEKSFQDGRKLLEEK--GY---RVESLARIASLEN 183 (189)
T ss_pred ChHHHHHHHHHHHCCCEEEEEEEEEEccCccHHHHHHhc--CC---cEEEEEEeeeccC
Confidence 999999999999999988887773322223456777553 22 3666666555543
No 54
>PRK09123 amidophosphoribosyltransferase; Provisional
Probab=98.79 E-value=4.1e-08 Score=103.14 Aligned_cols=112 Identities=17% Similarity=0.146 Sum_probs=78.6
Q ss_pred HHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeE--EEEEEEcC------------CccEEEE---eeCCCC
Q 015926 240 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMI--VCNKVRDG------------NQRIVRI---KEGDPR 300 (398)
Q Consensus 240 ~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~--v~~K~R~~------------~~~~~~~---~~g~v~ 300 (398)
...+++.|.+....+..+|++.-.++...|..+++ +.|+. ++++ |.. +..+... ....++
T Consensus 281 R~~~g~~La~~~~~~~D~Vv~VP~sg~~~A~~la~~lgip~~~~lir~-~y~grt~i~~~q~~r~~~v~~k~~~~~~~~~ 359 (479)
T PRK09123 281 RKNIGRELARESPVDADVVVPVPDSGVPAAIGYAQESGIPFELGIIRN-HYVGRTFIQPTQQIRNLGVKLKHNANRAVIE 359 (479)
T ss_pred HHHHHHHHHHhCCCCCeEEEEcCccHHHHHHHHHHhcCCCeeheEEEE-eecCccccccccccccccEEEEecccccccC
Confidence 34566666654433445666666677777776664 45553 3433 321 0111111 122378
Q ss_pred CCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEE-----EeccCCc---hHHHHHhhc
Q 015926 301 GRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYV-----THGIFPN---ASWERFKQD 352 (398)
Q Consensus 301 gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~-----TH~~~s~---~a~~~l~~~ 352 (398)
||+|+||||+++||.|+.++++.|+++||++|++.+ +|+.|.+ ++.++|..+
T Consensus 360 gk~vvlvDD~i~tG~Tl~~~~~~l~~~Ga~~v~~~~~~p~~~~~~~~gid~~~~~~l~~~ 419 (479)
T PRK09123 360 GKRVVLVDDSIVRGTTSRKIVQMLRDAGAKEVHLRIASPPITHPCFYGIDTPERSKLLAA 419 (479)
T ss_pred CCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEcCCCCccceeecCCCCCHHHHHHc
Confidence 999999999999999999999999999999999999 9999999 888877664
No 55
>PRK09246 amidophosphoribosyltransferase; Provisional
Probab=98.77 E-value=5.2e-09 Score=110.53 Aligned_cols=47 Identities=19% Similarity=0.270 Sum_probs=42.0
Q ss_pred eCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCC
Q 015926 296 EGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFP 342 (398)
Q Consensus 296 ~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s 342 (398)
...++||+|+||||++|||.|+.++++.|+++||++|+++++-+.+.
T Consensus 353 ~~~v~gK~VlLVDDvitTGaTl~~~~~~L~~aGA~~V~v~v~ap~i~ 399 (501)
T PRK09246 353 RAEFKGKNVLLVDDSIVRGTTSEQIVQMAREAGAKKVYFASAAPPVR 399 (501)
T ss_pred cccccCCeEEEEeccccccHHHHHHHHHHHHcCCCEEEEEEEccccc
Confidence 34689999999999999999999999999999999999998755433
No 56
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=98.71 E-value=1.1e-07 Score=91.61 Aligned_cols=111 Identities=12% Similarity=0.144 Sum_probs=76.1
Q ss_pred HHHHHHHHHhCC-CCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCc-cE-------------EEEe-eCC-CC
Q 015926 240 IPLLLNRLQQLP-DSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQ-RI-------------VRIK-EGD-PR 300 (398)
Q Consensus 240 ~~lLa~~L~~~~-~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~-~~-------------~~~~-~g~-v~ 300 (398)
...+++.+.+.+ +.+..+|++++.+|+..+..++. +.|+++++|.++... .. .... ... .+
T Consensus 96 ~~~v~~~la~~~~~~~~D~Vvtv~~~GI~lA~~lA~~L~~p~vi~Rk~~~~~~~~~v~~y~s~s~~~~~~~~l~~~~l~~ 175 (238)
T PRK08558 96 LRLIAPVVAERFMGLRVDVVLTAATDGIPLAVAIASYFGADLVYAKKSKETGVEKFYEEYQRLASGIEVTLYLPASALKK 175 (238)
T ss_pred HHHHHHHHHHHccCCCCCEEEEECcccHHHHHHHHHHHCcCEEEEEecCCCCCcceEEEeeccCCCceeEEEecHHHcCC
Confidence 344444444433 22446889999999999887654 678888877653221 10 0111 112 57
Q ss_pred CCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhh
Q 015926 301 GRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQ 351 (398)
Q Consensus 301 gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~ 351 (398)
|++|+||||+++||+|+..+++.++++||..+.++|.-..- +.+++++.+
T Consensus 176 G~rVLIVDDvi~TG~Tl~~~~~ll~~~ga~vvgv~vlv~~~-~~~~~~l~~ 225 (238)
T PRK08558 176 GDRVLIVDDIIRSGETQRALLDLARQAGADVVGVFFLIAVG-EVGIDRARE 225 (238)
T ss_pred cCEEEEEecccccCHHHHHHHHHHHHcCCEEEEEEEEEecC-chHHHHHhH
Confidence 99999999999999999999999999999988888744432 234777764
No 57
>PRK06031 phosphoribosyltransferase; Provisional
Probab=98.67 E-value=3.8e-07 Score=87.55 Aligned_cols=126 Identities=14% Similarity=0.076 Sum_probs=79.1
Q ss_pred HHHHHHHhCC-CCCCeEEEeeCCCchhhHHHhhcCCC---eEEEEEEEcC---C-------------ccEEEEee----C
Q 015926 242 LLLNRLQQLP-DSDNISIAFPDDGAWKRFHKQLQHFP---MIVCNKVRDG---N-------------QRIVRIKE----G 297 (398)
Q Consensus 242 lLa~~L~~~~-~~~~~vVVaPD~Ga~~Ra~~~~~~~~---~~v~~K~R~~---~-------------~~~~~~~~----g 297 (398)
.+++.|.+.. +.+..+|+++..+|+..+..++..+. +..+.+.|+. + ......+. .
T Consensus 71 ~la~~La~~~~~~~~DvIVgv~~~Gi~lA~~lA~~Lg~~~~vpl~~~rK~~~~~~l~~~~~sitt~~~~~~~~l~~~~~~ 150 (233)
T PRK06031 71 ALAEHLAEKARAFDPDVVAGLPTLGLTLAAAVARKLGHTRYVPLGTSRKFWYRDELSVPLSSITTPDQGKRLYIDPRMLP 150 (233)
T ss_pred HHHHHHHHHcccCCCcEEEEeccCCHHHHHHHHHHHCCCCceEEEEccccccccccccceeeeeccCccceEEecccccc
Confidence 3455554432 23456899999999998876653221 2223333321 0 00001111 2
Q ss_pred CCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCccc
Q 015926 298 DPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPV 372 (398)
Q Consensus 298 ~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~ 372 (398)
.++||+|+||||+++||+|+.++++.|++.|++.+.+.+.- .-.++..+++.+... +.-++++..-.+|.
T Consensus 151 ~~~GkrVLIVDDVitTG~Tl~aa~~lL~~~Ga~Vvgv~v~v-~~g~~~~~~l~~~~~----~~~~~~~~~~~~p~ 220 (233)
T PRK06031 151 LLEGRRVALIDDVISSGASIVAGLRLLAACGIEPAGIGAAM-LQSERWRESLAAAGP----QWPARVVGVFATPI 220 (233)
T ss_pred cCCCCEEEEEEeEccccHHHHHHHHHHHHcCCeEEEEEEEE-EccccHHHHHHhcCC----CcccceEEEeeccc
Confidence 36899999999999999999999999999999866665522 223456777776521 12577777777765
No 58
>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism]
Probab=98.66 E-value=1.6e-07 Score=85.42 Aligned_cols=117 Identities=15% Similarity=0.087 Sum_probs=78.8
Q ss_pred EEcCCch-hhhcccCCCCcccccchHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEE--EEEEcCCc-
Q 015926 216 TFDIHAL-QERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVC--NKVRDGNQ- 289 (398)
Q Consensus 216 tVDLHs~-q~~gfFn~~l~~~~~~a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~--~K~R~~~~- 289 (398)
++|+|-. +.-|-+...+. +-+..+++.+.+....+-++||+....|++.|..++. +..+.+. +|.|...+
T Consensus 51 p~Di~i~W~siG~s~sRl~----~Is~am~Dm~m~~~~~evDvVvGIa~sGvPlAtmvA~elg~elaiY~PrK~~~de~~ 126 (203)
T COG0856 51 PVDIKIDWRSIGKSGSRLR----YISEAMADMIMEKVSFEVDVVVGIAISGVPLATMVAYELGKELAIYHPRKHRKDEGA 126 (203)
T ss_pred CcceEEechhhccchHHHH----HHHHHHHHHHHHhccceeEEEEEEeecCccHHHHHHHHhCCceEEEecccccccccC
Confidence 7777743 22333222221 2345566633332345667899999999999877664 4455433 45554321
Q ss_pred ---cEEEEeeCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEE
Q 015926 290 ---RIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYV 336 (398)
Q Consensus 290 ---~~~~~~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~ 336 (398)
..+....+.|+||+|+||||++|||.|+.++++.|++.|++-+.+.+
T Consensus 127 ~~~G~iS~NFa~V~gK~cvIVDDvittG~Ti~E~Ie~lke~g~kpv~v~V 176 (203)
T COG0856 127 GKGGSISSNFASVEGKRCVIVDDVITTGSTIKETIEQLKEEGGKPVLVVV 176 (203)
T ss_pred CcCceeecccccccCceEEEEecccccChhHHHHHHHHHHcCCCcEEEEE
Confidence 12334467899999999999999999999999999999999887776
No 59
>PRK05500 bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Validated
Probab=98.63 E-value=2.8e-07 Score=96.66 Aligned_cols=97 Identities=21% Similarity=0.200 Sum_probs=73.7
Q ss_pred CCeEEEeeCCCchhhHHHhh--cCCCeEEEEEEEcCCccEEEEeeCCC-CCCEEEEEeccccchHhHHHHHHHHHHcCCC
Q 015926 254 DNISIAFPDDGAWKRFHKQL--QHFPMIVCNKVRDGNQRIVRIKEGDP-RGRHIVIVDDLVQSGGTLIECQKVLAAHGAA 330 (398)
Q Consensus 254 ~~~vVVaPD~Ga~~Ra~~~~--~~~~~~v~~K~R~~~~~~~~~~~g~v-~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~ 330 (398)
+-..|++|..||+..+..++ .+.|+.+.||+.+..++.. ...|.+ +|++|+||||++|||+|+.++++.|+++|+.
T Consensus 344 ~~D~I~Gia~gGiPlAt~lA~~lg~p~v~vRKe~K~~G~~~-~ieG~~~~G~rVlIVDDViTTGgSi~eaie~l~~aG~~ 422 (477)
T PRK05500 344 TFDRIAGIPYGSLPTATGLALHLHHPMIFPRKEVKAHGTRR-LIEGNFHPGETVVVVDDILITGKSVMEGAEKLKSAGLN 422 (477)
T ss_pred CCCEEEEEccchHHHHHHHHHHhCCCEEEEecCcCccCCCc-eEecCCCCcCEEEEEEeccccCHHHHHHHHHHHHCCCE
Confidence 34589999999999987655 3678888888876544311 235555 7999999999999999999999999999998
Q ss_pred EEEEEEEeccCCchHHHHHhhc
Q 015926 331 KISAYVTHGIFPNASWERFKQD 352 (398)
Q Consensus 331 ~V~~~~TH~~~s~~a~~~l~~~ 352 (398)
.+.++|.--.- .++.++|++.
T Consensus 423 V~~v~vlVDR~-~g~~~~L~~~ 443 (477)
T PRK05500 423 VRDIVVFIDHE-QGVKDKLQSH 443 (477)
T ss_pred EEEEEEEEECC-cchHHHHHhc
Confidence 87777643332 3556777653
No 60
>PLN02440 amidophosphoribosyltransferase
Probab=98.59 E-value=1.5e-07 Score=98.92 Aligned_cols=42 Identities=24% Similarity=0.402 Sum_probs=39.5
Q ss_pred CCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEe
Q 015926 297 GDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTH 338 (398)
Q Consensus 297 g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH 338 (398)
..++||+|+||||++|||.|+.++++.|+++||++|++++.-
T Consensus 336 ~~v~gk~VlLVDDiittGtTl~~i~~~L~~aGa~~V~v~v~~ 377 (479)
T PLN02440 336 SVLEGKRVVVVDDSIVRGTTSSKIVRMLREAGAKEVHMRIAS 377 (479)
T ss_pred ccccCceEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEC
Confidence 468999999999999999999999999999999999999864
No 61
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=98.55 E-value=1.2e-06 Score=85.74 Aligned_cols=108 Identities=13% Similarity=0.120 Sum_probs=76.4
Q ss_pred CCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCC-cc-------------E-EEEe-eCCC-CCCEEEEEeccccch
Q 015926 254 DNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGN-QR-------------I-VRIK-EGDP-RGRHIVIVDDLVQSG 314 (398)
Q Consensus 254 ~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~-~~-------------~-~~~~-~g~v-~gk~viIVDDii~TG 314 (398)
+..+|+++..+|+..|..++. +.|+++++|..+.. .. + ...+ ...+ +|++|+||||+++||
T Consensus 128 ~iD~VvgvetkGIpLA~avA~~L~vp~vivRK~~K~t~g~~vs~nY~sgs~~~ie~m~l~k~~l~~G~rVLIVDDv~~TG 207 (268)
T TIGR01743 128 EIDAVMTVATKGIPLAYAVASVLNVPLVIVRKDSKVTEGSTVSINYVSGSSNRIQTMSLAKRSLKTGSKVLIIDDFMKAG 207 (268)
T ss_pred CCCEEEEEccchHHHHHHHHHHHCCCEEEEEECCCCCCCCcEEEEEEcccCccceEEEEehhhCCCcCEEEEEeeecccC
Confidence 446899999999999876653 67888888876531 10 0 0111 1233 699999999999999
Q ss_pred HhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcc
Q 015926 315 GTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCP 371 (398)
Q Consensus 315 ~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip 371 (398)
+|+..+++.+++.||.-+.+++.-.. .+..+++.. .+..++..+.+.
T Consensus 208 gTi~a~i~Ll~e~Ga~VvGv~vlve~--~~~~~~l~~--------~~~SL~~~~~~~ 254 (268)
T TIGR01743 208 GTINGMINLLDEFDAEVAGIGVLIDN--EGVDEKLVD--------DYMSLLTLSNIN 254 (268)
T ss_pred HHHHHHHHHHHHCCCEEEEEEEEEEC--CCChHHcCC--------CceEEEEEeecc
Confidence 99999999999999988877763333 234566543 266677666554
No 62
>PRK08341 amidophosphoribosyltransferase; Provisional
Probab=98.55 E-value=1.3e-07 Score=98.38 Aligned_cols=102 Identities=20% Similarity=0.203 Sum_probs=67.1
Q ss_pred HHHHHHHHHhCCCC-CCeEEEeeCCCchhhHHHhhc--CCCeEE-EEEEEcC-------C---ccEEE---EeeCCCCCC
Q 015926 240 IPLLLNRLQQLPDS-DNISIAFPDDGAWKRFHKQLQ--HFPMIV-CNKVRDG-------N---QRIVR---IKEGDPRGR 302 (398)
Q Consensus 240 ~~lLa~~L~~~~~~-~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v-~~K~R~~-------~---~~~~~---~~~g~v~gk 302 (398)
-..+++.|.+.... .+.++..||.|. ..|..+++ +.|+.. +.|.|.. . ..... ...+.++||
T Consensus 257 R~~~G~~La~~~~~~~D~Vv~VPdsg~-~~A~~~a~~lgip~~~~l~k~r~~~rtfi~~~qr~~~~~~k~~~~~~~v~gk 335 (442)
T PRK08341 257 RYRMGVELARESPAEGDVVIAVPDSGR-TAALGFAHESGIPYMEGLIKNRYIGRTFIMPSGRELKVKLKLSPVREVINGK 335 (442)
T ss_pred HHHHHHHhhcccCCCCceEEEecCchH-HHHHHHHHHhCCCchheEEEeccccccccCcCchhhhheeeecccccccCCC
Confidence 34556666654322 345677777665 45554443 456532 4455521 0 11111 224568999
Q ss_pred EEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCC
Q 015926 303 HIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFP 342 (398)
Q Consensus 303 ~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s 342 (398)
+|+||||+++||.|+.++++.|+++||++|++.+.-+-+.
T Consensus 336 ~VlLVDD~IttGtTl~~~~~~L~~aGAk~V~~~~~spp~~ 375 (442)
T PRK08341 336 RVVLVDDSIVRGTTMKRIVKMLRDAGAREVHVRIASPPIR 375 (442)
T ss_pred EEEEEeeeeccHHHHHHHHHHHHhcCCcEEEEEEcCCCcc
Confidence 9999999999999999999999999999999987655443
No 63
>PRK09213 pur operon repressor; Provisional
Probab=98.53 E-value=1.2e-06 Score=85.90 Aligned_cols=109 Identities=14% Similarity=0.128 Sum_probs=76.0
Q ss_pred CCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcC-Ccc-------------E-EEEe-eCCC-CCCEEEEEeccccch
Q 015926 254 DNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDG-NQR-------------I-VRIK-EGDP-RGRHIVIVDDLVQSG 314 (398)
Q Consensus 254 ~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~-~~~-------------~-~~~~-~g~v-~gk~viIVDDii~TG 314 (398)
+..+|++++.+|+..+..++. +.|+++++|..+. .+. + ...+ ...+ +|++|+||||+++||
T Consensus 130 ~iD~Vvtvet~GIplA~~vA~~L~vp~vivRK~~K~~~G~~vs~~y~sgs~~~ie~m~L~~~~l~~G~rVLIVDDv~~TG 209 (271)
T PRK09213 130 KIDAVMTVETKGIPLAYAVANYLNVPFVIVRRDSKVTEGSTVSINYVSGSSKRIETMSLSKRSLKEGSRVLIVDDFMKAG 209 (271)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEEECCCCCCCCcEEEEEEecccccceEEEEeHhhcCCcCEEEEEeeecccC
Confidence 346899999999999876653 6788888886542 111 0 0011 1233 699999999999999
Q ss_pred HhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCccc
Q 015926 315 GTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPV 372 (398)
Q Consensus 315 ~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~ 372 (398)
+|+..+++.+++.||.-+.+++.-..- +..+++.. .+..++..+.+..
T Consensus 210 gTi~a~i~Ll~e~Ga~VvGv~vlVd~~--~~~~~l~~--------~~~SL~~~~~vd~ 257 (271)
T PRK09213 210 GTINGMISLLKEFDAEVVGIGVLVETK--EPEERLVD--------DYVSLLKLSEVDE 257 (271)
T ss_pred HhHHHHHHHHHHCCCEEEEEEEEEECC--CChhhcCC--------ceEEEEEEehhcc
Confidence 999999999999999988777633332 23455533 3667776665543
No 64
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=98.48 E-value=1.9e-06 Score=79.48 Aligned_cols=98 Identities=19% Similarity=0.227 Sum_probs=70.6
Q ss_pred HHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCcc-------------EEEEeeCCC-CCCE
Q 015926 240 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQR-------------IVRIKEGDP-RGRH 303 (398)
Q Consensus 240 ~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~~-------------~~~~~~g~v-~gk~ 303 (398)
...+++++... +-..|+++..+|+..+..++. +.|+++++|.++.... ......+.+ +|++
T Consensus 42 i~~~~~~~~~~---~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~vRK~~kl~~~~~~~~~~~~~~~~~l~~~~~~l~~G~r 118 (179)
T COG0503 42 IDELAERYKDD---GIDKIVTIEARGIPLAAAVALELGVPFVPVRKKGKLPEESVVETYYLEYGSETLELHKDALKPGDR 118 (179)
T ss_pred HHHHHHHhccc---CCCEEEEEccccchhHHHHHHHhCCCEEEEEecCCCCCcceeEEEEEeccceEEEEEhhhCCCCCE
Confidence 34555555542 245799999999999877654 6788888886653210 011112222 6999
Q ss_pred EEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEecc
Q 015926 304 IVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGI 340 (398)
Q Consensus 304 viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~ 340 (398)
|+||||+++||+|+..+.+++.++|+.-+.+.+.-..
T Consensus 119 VlIVDDllaTGgT~~a~~~Ll~~~ga~vvg~~~~ie~ 155 (179)
T COG0503 119 VLIVDDLLATGGTALALIELLEQAGAEVVGAAFVIEL 155 (179)
T ss_pred EEEEecchhcChHHHHHHHHHHHCCCEEEEEEEEEEc
Confidence 9999999999999999999999999998888874443
No 65
>PRK06388 amidophosphoribosyltransferase; Provisional
Probab=98.47 E-value=8.4e-07 Score=93.19 Aligned_cols=142 Identities=13% Similarity=0.067 Sum_probs=81.9
Q ss_pred EEeeccCCCCCccccccCCCcchHH-HHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHHHHHHHHh
Q 015926 171 TLVLPFFPTGTSERMEDEGDVATAF-TLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQ 249 (398)
Q Consensus 171 taViPY~~YsRQDr~~~~ge~isak-~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~lLa~~L~~ 249 (398)
.++.-|..++|-|-.........+| -+++.|+.-. ...+|.|++||+|.. + ++..+++.+..
T Consensus 253 ~C~fE~iYfarpds~~~g~~vy~~R~~~G~~La~~~--~~~~D~VvpVP~s~~------~---------~A~g~a~~~gi 315 (474)
T PRK06388 253 HCMFEYVYFSRPDSIIDGINVYQARVRMGMRLAKES--PVEADVVVPVPDSGR------S---------QAIGFSMASGI 315 (474)
T ss_pred cceEEEEeecCCccccCCcHHHHHHHHHHHHHHhhc--cCCCcEEEeeCCCcH------H---------HHHHHHHHhCC
Confidence 4677788888888654433333333 4556665321 125789999999973 1 23344443322
Q ss_pred CCCCCCeEEEeeCCCchhhHHHhhcCCCeEEEEEEEcCCccEEE-EeeCCCCCCEEEEEeccccchHhHHHHHHHHHHcC
Q 015926 250 LPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVR-IKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHG 328 (398)
Q Consensus 250 ~~~~~~~vVVaPD~Ga~~Ra~~~~~~~~~~v~~K~R~~~~~~~~-~~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~G 328 (398)
- ... ++.|.+...++.-. -..++|....+... .....++||+|+||||+++||.|+.++++.|+++|
T Consensus 316 p--~~~---------~L~r~r~~~r~fi~-~~q~~R~~~~~~kl~~~~~~i~gk~VlLVDDsittGtTl~~~~~~L~~aG 383 (474)
T PRK06388 316 P--YTE---------GLIKNRYSERTFIM-PTQSDRKAAIKLKLNPIREVISGKRIVLVDDSIVRGNTMRFIVKIMRKYG 383 (474)
T ss_pred C--chh---------heEEecccCCcccC-CchhhhhhceeEEeccccccccCceEEEEeCeECcHHHHHHHHHHHHHcC
Confidence 1 111 12221111111000 00122322222111 12345789999999999999999999999999999
Q ss_pred CCEEEEEEEeccC
Q 015926 329 AAKISAYVTHGIF 341 (398)
Q Consensus 329 A~~V~~~~TH~~~ 341 (398)
|++|++..+-|-+
T Consensus 384 ak~V~~ri~sPpi 396 (474)
T PRK06388 384 AKEVHVRIGSPHI 396 (474)
T ss_pred CCEEEEEeCCCCc
Confidence 9999998765543
No 66
>PRK06781 amidophosphoribosyltransferase; Provisional
Probab=98.43 E-value=4.2e-07 Score=95.42 Aligned_cols=47 Identities=21% Similarity=0.388 Sum_probs=42.2
Q ss_pred eCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCC
Q 015926 296 EGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFP 342 (398)
Q Consensus 296 ~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s 342 (398)
...++||+|+||||++|||.|+.++++.|+++||++|++++.-|-+.
T Consensus 343 ~~~i~gk~VlLVDDvittGtTl~~~~~~Lk~aGA~eV~v~i~sPpi~ 389 (471)
T PRK06781 343 RGVVEGKRVVMIDDSIVRGTTSKRIVRMLREAGATEVHVRIASPPLK 389 (471)
T ss_pred ccccCCceEEEEeceeccchHHHHHHHHHHHcCCcEEEEEECCCCcc
Confidence 45689999999999999999999999999999999999998666443
No 67
>TIGR01134 purF amidophosphoribosyltransferase. Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.
Probab=98.43 E-value=4.2e-07 Score=94.73 Aligned_cols=42 Identities=29% Similarity=0.424 Sum_probs=39.3
Q ss_pred eCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEE
Q 015926 296 EGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVT 337 (398)
Q Consensus 296 ~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~T 337 (398)
...++||+|+||||+++||.|+.++++.|+++||++|++++.
T Consensus 333 ~~~~~gk~v~lvDD~ittG~T~~~~~~~l~~~ga~~v~~~~~ 374 (442)
T TIGR01134 333 REVFRGKRVVLVDDSIVRGTTSRQIVKMLRDAGAKEVHVRIA 374 (442)
T ss_pred cccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEEc
Confidence 456899999999999999999999999999999999999876
No 68
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=98.41 E-value=1.5e-06 Score=78.39 Aligned_cols=86 Identities=17% Similarity=0.172 Sum_probs=57.9
Q ss_pred hHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhcCC--Ce-EEEEEEEc--C-CccEEEEeeCCCCCCEEEEEecccc
Q 015926 239 AIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHF--PM-IVCNKVRD--G-NQRIVRIKEGDPRGRHIVIVDDLVQ 312 (398)
Q Consensus 239 a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~~~--~~-~v~~K~R~--~-~~~~~~~~~g~v~gk~viIVDDii~ 312 (398)
....+++.|.+. .+.++++++..||+..+..++..+ +. .+++-.+. . .+..........+||+|+|||||++
T Consensus 18 ~i~~la~~I~~~--~~~d~vvgv~~GG~~fa~~L~~~L~~~~v~~i~~ssY~~~~~~~~~~~~~~~~~gk~VLIVDDIiD 95 (156)
T PRK09177 18 DARALAWRLLPA--GQWKGIIAVTRGGLVPAAILARELGIRLVDTVCISSYDHDNQGELKVLKRAEGDGEGFLVVDDLVD 95 (156)
T ss_pred HHHHHHHHHHhh--CCCCEEEEEecCCeehHHHHHHHcCCCceeEEEEEEECCCcCCcEEEecCCCcCcCEEEEEeeeeC
Confidence 456677777653 245789999999999988876543 32 12221121 1 1111111223468999999999999
Q ss_pred chHhHHHHHHHHHH
Q 015926 313 SGGTLIECQKVLAA 326 (398)
Q Consensus 313 TG~Tl~~aa~~Lk~ 326 (398)
||.|+.++.+.+++
T Consensus 96 TG~Tl~~v~~~l~~ 109 (156)
T PRK09177 96 TGGTARAVREMYPK 109 (156)
T ss_pred CHHHHHHHHHHHhh
Confidence 99999999999974
No 69
>PRK07349 amidophosphoribosyltransferase; Provisional
Probab=98.39 E-value=8.6e-07 Score=93.62 Aligned_cols=100 Identities=21% Similarity=0.104 Sum_probs=65.8
Q ss_pred HHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhc--CCCeE-EEEEEEcC------C--------ccEEE-EeeCCCCC
Q 015926 240 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQ--HFPMI-VCNKVRDG------N--------QRIVR-IKEGDPRG 301 (398)
Q Consensus 240 ~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~--~~~~~-v~~K~R~~------~--------~~~~~-~~~g~v~g 301 (398)
-..++++|.+....+.++|++....++.-|..++. +.|+. .+.|.|.. . .+... .....++|
T Consensus 298 R~~~G~~La~~~~~~~DvVv~VP~sg~~~A~g~A~~lgip~~~~L~r~~y~grtfi~p~q~~R~~~~~~kl~~~~~~~~g 377 (500)
T PRK07349 298 RQRLGQQLAKESPVDADLVIGVPDSGIPAAIGFSQASGIPYAEGLIKNRYVGRTFIQPTQSMRESGIRMKLNPLKDVLAG 377 (500)
T ss_pred HHHHHHHHhhhcccCCcEEEEeccccHHHHHHHHHHHCCCchhceEEEeccCccccCCCHHHHHhhhheeeeccccccCC
Confidence 45677777664444455666666667666655543 45552 12233321 0 01111 12345789
Q ss_pred CEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEec
Q 015926 302 RHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHG 339 (398)
Q Consensus 302 k~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~ 339 (398)
|+|+||||+++||.|+.++++.|+++||++|++...-+
T Consensus 378 krVlLVDDvIttGtTl~~~~~~Lr~aGAkeV~~~i~sP 415 (500)
T PRK07349 378 KRIIIVDDSIVRGTTSRKIVKALRDAGATEVHMRISSP 415 (500)
T ss_pred CEEEEEeceeCCcHHHHHHHHHHHHhCCeEEEEEeCCC
Confidence 99999999999999999999999999999999984433
No 70
>PRK07631 amidophosphoribosyltransferase; Provisional
Probab=98.38 E-value=2.7e-07 Score=96.82 Aligned_cols=48 Identities=23% Similarity=0.375 Sum_probs=42.6
Q ss_pred eCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCc
Q 015926 296 EGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPN 343 (398)
Q Consensus 296 ~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~ 343 (398)
...++||+|+||||+++||.|+.++++.|+++||++|++.++-|.+..
T Consensus 343 ~~~v~gk~VlLVDDsittGtTl~~~~~~L~~aGA~eV~v~~~sPpi~~ 390 (475)
T PRK07631 343 RGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVRISSPPITH 390 (475)
T ss_pred ccccCCceEEEEeeeeccHHHHHHHHHHHHHcCCCEEEEEEeCCCccC
Confidence 456899999999999999999999999999999999999987664443
No 71
>KOG3367 consensus Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=98.33 E-value=1.5e-06 Score=79.00 Aligned_cols=105 Identities=17% Similarity=0.246 Sum_probs=75.6
Q ss_pred chHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHHhhcC---------CCe--EEEEEEEcCCccE---EEEe----eCCC
Q 015926 238 SAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQH---------FPM--IVCNKVRDGNQRI---VRIK----EGDP 299 (398)
Q Consensus 238 ~a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~~~~~---------~~~--~v~~K~R~~~~~~---~~~~----~g~v 299 (398)
...+.||+.+.+..+..++++++...|+-++.+++.+. .|+ .+++-+...+... +... ..++
T Consensus 44 dr~~rlakDi~~~~g~~~i~~lcVlkG~ykF~adLve~l~n~~s~~~~pmtvDFIR~kSY~n~~stg~iqiig~d~l~~l 123 (216)
T KOG3367|consen 44 DRVERLAKDIMKEIGNKPIIFLCVLKGGYKFFADLVERLKNRNSDRPLPMTVDFIRAKSYCNDQSTGDIQIIGGDDLSTL 123 (216)
T ss_pred hHHHHhhhhhhhccCCCceEEEEEecchhHHHHHHHHHHhhcccCCCcceeeeeeehhhhcCCcccCCceeecCCCHHHh
Confidence 34677788887766667788999999999998876532 233 3333222222211 1112 2257
Q ss_pred CCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchH
Q 015926 300 RGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNAS 345 (398)
Q Consensus 300 ~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a 345 (398)
.||+|+|||||++||.||......+++.++..|.++. ++.+..
T Consensus 124 tgK~VliVeDIvdTGrTl~~Lls~~~~~k~~~v~vas---LL~Krt 166 (216)
T KOG3367|consen 124 TGKNVLIVEDIVDTGRTLSTLLSHMKAYKPSMVKVAS---LLVKRT 166 (216)
T ss_pred cCCcEEEEEeeccccchHHHHHHHHHhcCccceeeee---eccccc
Confidence 9999999999999999999999999999999999986 776654
No 72
>KOG1712 consensus Adenine phosphoribosyl transferases [Nucleotide transport and metabolism]
Probab=98.32 E-value=2.8e-06 Score=76.50 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=80.3
Q ss_pred chHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHH--hhcCCCeEEEEEEEcCCcc-------------EEEEeeCCCC-C
Q 015926 238 SAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHK--QLQHFPMIVCNKVRDGNQR-------------IVRIKEGDPR-G 301 (398)
Q Consensus 238 ~a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~--~~~~~~~~v~~K~R~~~~~-------------~~~~~~g~v~-g 301 (398)
....++++++++.++.+..+|++.+..+.-+--. ++-+++++-+||.-+-.+. ......+.++ |
T Consensus 43 ~lidlf~~h~~~~~~~~Id~iaGlEaRGFLFGP~iAlalG~~fVPiRK~gKLPG~~i~~~Y~lEYg~d~~Emq~~Ai~~g 122 (183)
T KOG1712|consen 43 KLIDLFVDHYRETFEMKIDVIAGLEARGFLFGPSIALALGAGFVPIRKPGKLPGEVISESYELEYGEDRFEMQKGAIKPG 122 (183)
T ss_pred HHHHHHHHHHHHHhcCcceEEEeeeecceecCcHHHHHhCCCeeecccCCCCCCceeEEEEeeecCccceeeeccccCCC
Confidence 3467888888875544567899998877665322 2235666555554332111 1222345554 9
Q ss_pred CEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhh
Q 015926 302 RHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQ 351 (398)
Q Consensus 302 k~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~ 351 (398)
.+|+||||++.||||+.+|.+.+.+.||.-|-+.|.-.+-.-...++|..
T Consensus 123 ~rvvvVDDllATGGTl~AA~~Ll~r~ga~vvE~~~vieL~~LkGr~kL~~ 172 (183)
T KOG1712|consen 123 QRVVVVDDLLATGGTLAAATELLERVGAEVVECACVIELPELKGREKLKG 172 (183)
T ss_pred CeEEEEechhhcCccHHHHHHHHHHhccEEEEEEEEEEccccCCccccCC
Confidence 99999999999999999999999999999999999777755566677654
No 73
>PRK07847 amidophosphoribosyltransferase; Provisional
Probab=98.28 E-value=2.6e-06 Score=90.18 Aligned_cols=142 Identities=15% Similarity=0.024 Sum_probs=82.4
Q ss_pred EEeeccCCCCCccccccCCCcchHH-HHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHHHHHHHHh
Q 015926 171 TLVLPFFPTGTSERMEDEGDVATAF-TLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRLQQ 249 (398)
Q Consensus 171 taViPY~~YsRQDr~~~~ge~isak-~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~lLa~~L~~ 249 (398)
.++.-|..++|-|-.........+| -+++.|+.-. ...+|.|++||.| |+ + ++..+++.+..
T Consensus 264 ~C~fE~vYfarpdS~~~g~~v~~~R~~~G~~La~~~--~~~~D~VvpVP~s-----G~-~---------~A~g~a~~~gi 326 (510)
T PRK07847 264 GCVFEYVYLARPDTTIAGRSVHAARVEIGRRLAREH--PVEADLVIPVPES-----GT-P---------AAVGYAQESGI 326 (510)
T ss_pred CCeEEEEEecCCcceeCCeEHHHHHHHHHHHHHhhC--CCCCeEEEeccCc-----hH-H---------HHHHHHHHhCC
Confidence 4788888999988665544444443 4556565321 1247899999987 33 2 45566665543
Q ss_pred CCCCCCeEEEeeCCCchhhHHHhhcCCCeEEEEEEEcCCccEEEEeeCCCCCCEEEEEeccccchHhHHHHHHHHHHcCC
Q 015926 250 LPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGA 329 (398)
Q Consensus 250 ~~~~~~~vVVaPD~Ga~~Ra~~~~~~~~~~v~~K~R~~~~~~~~~~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA 329 (398)
.+ ... ++-- ..+.|......+... -++.|.... .....++||+|+||||+++||.|+.++++.|+++||
T Consensus 327 p~--~~~-l~kn--~~~grtfi~~~q~~r--~~~~r~k~~----~~~~~~~gk~vllVDD~ittG~T~~~~~~~L~~~ga 395 (510)
T PRK07847 327 PF--GQG-LVKN--AYVGRTFIQPSQTIR--QLGIRLKLN----PLREVIRGKRLVVVDDSIVRGNTQRALVRMLREAGA 395 (510)
T ss_pred Ch--hhc-eEee--cccccCccCcchhhh--hhceeeecC----ccccccCCCEEEEEecccCchHHHHHHHHHHHHcCC
Confidence 21 111 1110 011111000000000 001111111 113347999999999999999999999999999999
Q ss_pred CEEEEEEEecc
Q 015926 330 AKISAYVTHGI 340 (398)
Q Consensus 330 ~~V~~~~TH~~ 340 (398)
++|++-..-|-
T Consensus 396 ~~v~~ri~sPp 406 (510)
T PRK07847 396 AEVHVRISSPP 406 (510)
T ss_pred CEEEEEECCCC
Confidence 99999876553
No 74
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=98.23 E-value=3.6e-06 Score=78.51 Aligned_cols=94 Identities=19% Similarity=0.173 Sum_probs=63.4
Q ss_pred hHHHHHHHHHhCCCCCCeEEEeeCCCchhhHHH---hhcCCCeEEEEEEEc-------CCccEEEEeeCC-CCCCEEEEE
Q 015926 239 AIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHK---QLQHFPMIVCNKVRD-------GNQRIVRIKEGD-PRGRHIVIV 307 (398)
Q Consensus 239 a~~lLa~~L~~~~~~~~~vVVaPD~Ga~~Ra~~---~~~~~~~~v~~K~R~-------~~~~~~~~~~g~-v~gk~viIV 307 (398)
....||+.|.+. ++.+.+++++..||+.-++- .+.-.++..+.-... +...+.....-+ +.||+|+||
T Consensus 15 ~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~~l~~i~v~~y~~~~~~~~~~~v~~~~~~d~l~GkkVLIV 93 (192)
T COG2236 15 LCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVKPLYSIKVEHYDETAERDGEAKVKYPITIDPLSGKKVLIV 93 (192)
T ss_pred HHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCCceEEEEEEEehhhcccCCcceeecCccccccCCCeEEEE
Confidence 467788888764 56788999999999876553 332224433322111 111112222335 899999999
Q ss_pred eccccchHhHHHHHHHHHHcCCCEEE
Q 015926 308 DDLVQSGGTLIECQKVLAAHGAAKIS 333 (398)
Q Consensus 308 DDii~TG~Tl~~aa~~Lk~~GA~~V~ 333 (398)
|||.|||.||..|.+.|++..+..+.
T Consensus 94 DDI~DTG~Tl~~a~~~l~~~~p~e~r 119 (192)
T COG2236 94 DDIVDTGETLELALEELKKLAPAEVR 119 (192)
T ss_pred ecccCchHhHHHHHHHHHhhCchhhh
Confidence 99999999999999999996555553
No 75
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=98.11 E-value=7.2e-05 Score=74.57 Aligned_cols=138 Identities=13% Similarity=0.100 Sum_probs=101.3
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEee-CCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHccc
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIELRSINWRKF-KDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPK 164 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~F-pDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~ 164 (398)
..+.+-...++..+|..+|+.| |.++..+...++ ++||.+.. +..++++|++|+||..+.+... .++.+++++++
T Consensus 160 ~~viv~pd~g~~~~A~~lA~~L-g~~~~~i~k~r~~~~~~~~~~-~~~~~v~g~~vliVDDii~tG~--Tl~~a~~~l~~ 235 (308)
T TIGR01251 160 NPVVVSPDAGGVERAKKVADAL-GCPLAIIDKRRISATNEVEVM-NLVGDVEGKDVVIVDDIIDTGG--TIAKAAEILKS 235 (308)
T ss_pred CCEEEEECCchHHHHHHHHHHh-CCCEEEEEEEecCCCCEEEEE-ecccccCCCEEEEEccccCCHH--HHHHHHHHHHh
Confidence 3455555666778999999999 699998988898 88875543 3346899999999999988755 45677899999
Q ss_pred cCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHHHH
Q 015926 165 LFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLL 244 (398)
Q Consensus 165 ~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~lLa 244 (398)
.||++|.++.++- ...++ .+.++.+ +|+|+|++.|.|... .+|+ .+. .++.+++||
T Consensus 236 ~ga~~v~~~~th~--------v~~~~-----a~~~l~~------~~~~~iv~tdt~~~~--~~~~-~~~--~v~va~~la 291 (308)
T TIGR01251 236 AGAKRVIAAATHG--------VFSGP-----AIERIAN------AGVEEVIVTNTIPHE--KHKP-KVS--VISVAPLIA 291 (308)
T ss_pred cCCCEEEEEEEee--------ecCcH-----HHHHHHh------CCCCEEEEeCCCCcc--ccCC-CcE--EEEhHHHHH
Confidence 9999999999831 11122 2346554 479999999999764 2343 221 235789999
Q ss_pred HHHHhCC
Q 015926 245 NRLQQLP 251 (398)
Q Consensus 245 ~~L~~~~ 251 (398)
+.|.+..
T Consensus 292 ~~i~~~~ 298 (308)
T TIGR01251 292 EAIRRIH 298 (308)
T ss_pred HHHHHHh
Confidence 9997753
No 76
>PLN02541 uracil phosphoribosyltransferase
Probab=97.49 E-value=0.00068 Score=65.64 Aligned_cols=95 Identities=15% Similarity=0.232 Sum_probs=61.8
Q ss_pred eEEEeeCCCchhhHHH---hhcCCCeEEEEEEEcCCc-cE-E-EE-eeCCCC-CCEEEEEeccccchHhHHHHHHHHHHc
Q 015926 256 ISIAFPDDGAWKRFHK---QLQHFPMIVCNKVRDGNQ-RI-V-RI-KEGDPR-GRHIVIVDDLVQSGGTLIECQKVLAAH 327 (398)
Q Consensus 256 ~vVVaPD~Ga~~Ra~~---~~~~~~~~v~~K~R~~~~-~~-~-~~-~~g~v~-gk~viIVDDii~TG~Tl~~aa~~Lk~~ 327 (398)
+++|+....|...... .++......+.-+|+... .. . .. +..++. +++|+|+||++.||+|+..+.+.|++.
T Consensus 104 i~~V~ILRAGl~m~~g~~~~~P~a~vg~i~~~rd~~t~e~~~yy~kLP~~i~~~~~VlllDpmLATGgS~~~ai~~L~~~ 183 (244)
T PLN02541 104 VAVVPILRAGLVLLEHASSVLPATKTYHLGFVRDEETLQPSMYLNKLPDKFPEGSRVLVVDPMLATGGTIVAAIDELVSR 183 (244)
T ss_pred EEEEeEeCCcHhHHHHHHhhCCCCeeEEEEEEEcccccceEEeeccCchhcCCCCEEEEECcchhhhHHHHHHHHHHHHc
Confidence 4555555555444333 233333333444454322 11 1 11 233464 679999999999999999999999999
Q ss_pred CCC--EEEEEEEeccCCchHHHHHhhc
Q 015926 328 GAA--KISAYVTHGIFPNASWERFKQD 352 (398)
Q Consensus 328 GA~--~V~~~~TH~~~s~~a~~~l~~~ 352 (398)
|+. +|.+++ -+-+...++++.+.
T Consensus 184 Gv~~~~I~~v~--~ias~~Gl~~i~~~ 208 (244)
T PLN02541 184 GASVEQIRVVC--AVAAPPALKKLSEK 208 (244)
T ss_pred CCCcccEEEEE--EEECHHHHHHHHHH
Confidence 998 666665 46678899999876
No 77
>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C ....
Probab=97.43 E-value=0.0011 Score=62.55 Aligned_cols=96 Identities=18% Similarity=0.202 Sum_probs=68.2
Q ss_pred CeEEEeeCCCchhhHHH---hhcCCCeEEEEEEEcCCc-cE--EE-EeeCCCCCCEEEEEeccccchHhHHHHHHHHHHc
Q 015926 255 NISIAFPDDGAWKRFHK---QLQHFPMIVCNKVRDGNQ-RI--VR-IKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAH 327 (398)
Q Consensus 255 ~~vVVaPD~Ga~~Ra~~---~~~~~~~~v~~K~R~~~~-~~--~~-~~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~ 327 (398)
++++|+...+|...... ..+..++..+.-+|+... .. .. .+..++.+++|+|+|-++.||+|+..+++.|+++
T Consensus 68 ~i~~V~IlRaG~~m~~~~~~~~p~a~~g~i~i~r~~~t~~p~~~y~~LP~~i~~~~VillDpmlaTG~s~~~ai~~L~~~ 147 (207)
T PF14681_consen 68 KICIVPILRAGLPMLEGFREVFPDARVGHIGIQRDEETLEPVLYYNKLPEDIENRKVILLDPMLATGGSAIAAIEILKEH 147 (207)
T ss_dssp CEEEEEETTTHHHHHHHHHHHSTTSEEEEEEEEEETTTSSEEEEEEE--TTGTTSEEEEEESEESSSHHHHHHHHHHHHT
T ss_pred cEEEEEEeCCcHHHHHHHHHhCCCcceEEEEEEEcCCccceeeeHhhCCCCccCCEEEEEeccccchhhHHHHHHHHHHc
Confidence 56777777677655443 334555555555665432 21 11 2356789999999999999999999999999999
Q ss_pred CC--CEEEEEEEeccCCchHHHHHhhc
Q 015926 328 GA--AKISAYVTHGIFPNASWERFKQD 352 (398)
Q Consensus 328 GA--~~V~~~~TH~~~s~~a~~~l~~~ 352 (398)
|+ ++|.+++ -+.+..+++++.+.
T Consensus 148 G~~~~~I~~v~--~ias~~Gl~~l~~~ 172 (207)
T PF14681_consen 148 GVPEENIIIVS--VIASPEGLERLLKA 172 (207)
T ss_dssp TG-GGEEEEEE--EEEEHHHHHHHHHH
T ss_pred CCCcceEEEEE--EEecHHHHHHHHHh
Confidence 87 6787776 34557889999875
No 78
>COG2065 PyrR Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=97.40 E-value=0.0011 Score=60.28 Aligned_cols=95 Identities=21% Similarity=0.225 Sum_probs=64.5
Q ss_pred HHHHHHH-hCCCCCCeEEEeeCCCchhhHHHhhc------CC--CeEE--EEEEEcCC---c--c---EEEEeeCCCCCC
Q 015926 242 LLLNRLQ-QLPDSDNISIAFPDDGAWKRFHKQLQ------HF--PMIV--CNKVRDGN---Q--R---IVRIKEGDPRGR 302 (398)
Q Consensus 242 lLa~~L~-~~~~~~~~vVVaPD~Ga~~Ra~~~~~------~~--~~~v--~~K~R~~~---~--~---~~~~~~g~v~gk 302 (398)
-++.+|. +..+.+++++++.-.+|+..|..++. +. |+.. +.-.|+.- . . .......++.||
T Consensus 18 Ria~eIiErnk~~~~~vlvGIktrGv~lA~rl~~~i~~~Eg~~vp~g~lDIt~yRDDl~~~~~~~p~~~~t~~~~di~~k 97 (179)
T COG2065 18 RIAHEIIERNKGLDNLVLVGIKTRGVPLAERLAERIEELEGIEVPVGELDITLYRDDLTQKGPLRPQAKTTILPFDITGK 97 (179)
T ss_pred HHHHHHHHHhCCCCceEEEeEecCCHHHHHHHHHHHHHHhCCCCCeeeEEeEEeechhhhcCccCCcccCccCcccccCC
Confidence 3444443 33356889999999999887665442 22 3311 12334311 1 0 011235689999
Q ss_pred EEEEEeccccchHhHHHHHHHHHHcC-CCEEEEEE
Q 015926 303 HIVIVDDLVQSGGTLIECQKVLAAHG-AAKISAYV 336 (398)
Q Consensus 303 ~viIVDDii~TG~Tl~~aa~~Lk~~G-A~~V~~~~ 336 (398)
+||||||++-||.|+.+|..+|...| +.+|..+|
T Consensus 98 ~VILVDDVLytGRTIRAAldal~d~GRPa~I~Lav 132 (179)
T COG2065 98 RVILVDDVLYTGRTIRAALDALVDYGRPAKIQLAV 132 (179)
T ss_pred EEEEEeeecccCccHHHHHHHHHhcCCcceEEEEE
Confidence 99999999999999999999999988 67787776
No 79
>COG0035 Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=97.16 E-value=0.0028 Score=59.88 Aligned_cols=95 Identities=16% Similarity=0.149 Sum_probs=66.1
Q ss_pred eEEEeeCCCchhhHHHhh---cCCCeEEEEEEEcCCc-cEEE---EeeCCCCCCEEEEEeccccchHhHHHHHHHHHHc-
Q 015926 256 ISIAFPDDGAWKRFHKQL---QHFPMIVCNKVRDGNQ-RIVR---IKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAH- 327 (398)
Q Consensus 256 ~vVVaPD~Ga~~Ra~~~~---~~~~~~v~~K~R~~~~-~~~~---~~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~- 327 (398)
+++|.....|+.....++ +...+..+--+|+... +... .+..++++|.|+|+|-|+.||+|+..|.+.|++.
T Consensus 72 i~~V~ILRAGl~m~~gl~~~~P~a~vG~ig~~Rdeet~~p~~yy~KLP~~~~~~~viv~DPMLATG~s~i~ai~~L~~~G 151 (210)
T COG0035 72 IVIVPILRAGLGMVEGLLKLIPSARVGHIGIYRDEETLEPVLYYEKLPEDIDERTVIVLDPMLATGGSAIAAIDLLKKRG 151 (210)
T ss_pred EEEEEEeeccccHHHHHHHhCCcceEEEEEEEecCccCceehhHHhCCCcccCCeEEEECchhhccHhHHHHHHHHHHhC
Confidence 555555544444433333 3333444445665442 2111 1234799999999999999999999999999999
Q ss_pred CCCEEEEEEEeccCCchHHHHHhhc
Q 015926 328 GAAKISAYVTHGIFPNASWERFKQD 352 (398)
Q Consensus 328 GA~~V~~~~TH~~~s~~a~~~l~~~ 352 (398)
|+++|.++| -+.++..++++.+.
T Consensus 152 ~~~~I~~v~--~vAapeGi~~v~~~ 174 (210)
T COG0035 152 GPKNIKVVS--LVAAPEGIKAVEKA 174 (210)
T ss_pred CCceEEEEE--EEecHHHHHHHHHh
Confidence 999999887 45568889999885
No 80
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=96.93 E-value=0.0012 Score=68.47 Aligned_cols=45 Identities=22% Similarity=0.344 Sum_probs=40.3
Q ss_pred eCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEecc
Q 015926 296 EGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGI 340 (398)
Q Consensus 296 ~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~ 340 (398)
...++||+|+||||-|-.|.|..+.++.||++||++|++...-|.
T Consensus 343 r~~v~GKrVvlVDDSIVRGTTsr~IV~mlReAGAkEVHvriasP~ 387 (470)
T COG0034 343 REVVKGKRVVLVDDSIVRGTTSRRIVQMLREAGAKEVHVRIASPP 387 (470)
T ss_pred HHHhCCCeEEEEccccccCccHHHHHHHHHHhCCCEEEEEecCCC
Confidence 446899999999999999999999999999999999999864443
No 81
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional
Probab=96.49 E-value=0.1 Score=52.05 Aligned_cols=134 Identities=15% Similarity=0.122 Sum_probs=93.0
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHcccc
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKL 165 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~ 165 (398)
..+.+-.......+|+.+|+.+ ++++.-+.-++..+++.++.....+++.|++|+||-.+.+-..-| .-.++.|++.
T Consensus 161 ~~vVVsPd~g~~~~a~~la~~l-~~~~~~~~K~R~~~~~~~~~~~~~~~v~Gr~vIIVDDIidTG~Tl--~~aa~~Lk~~ 237 (301)
T PRK07199 161 RPLLIGPDEESEQWVAAVAERA-GAPHAVLRKTRHGDRDVEISLPDAAPWAGRTPVLVDDIVSTGRTL--IEAARQLRAA 237 (301)
T ss_pred CcEEEEeCCChHHHHHHHHHHh-CCCEEEEEEEecCCCeEEEEeccCcccCCCEEEEEecccCcHHHH--HHHHHHHHHC
Confidence 4455555666788999999999 588887777777666555544444579999999999887654333 4557899999
Q ss_pred CccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHHHHH
Q 015926 166 FVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLN 245 (398)
Q Consensus 166 gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~lLa~ 245 (398)
||++|.++.-.-=. +.....++.. +|++.|++-|-+... .++ ++.++++|+
T Consensus 238 GA~~V~~~~tHgvf-------------s~~a~~~l~~------~~i~~iv~Tdti~~~------~~~----~sva~lla~ 288 (301)
T PRK07199 238 GAASPDCVVVHALF-------------AGDAYSALAA------AGIARVVSTDTVPHP------SNA----ISLAPLLAE 288 (301)
T ss_pred CCcEEEEEEEeeeC-------------ChHHHHHHHh------CCCCEEEEeCCccCC------CCE----EehHHHHHH
Confidence 99999988744211 1222334433 478999999977421 111 257899999
Q ss_pred HHHhCC
Q 015926 246 RLQQLP 251 (398)
Q Consensus 246 ~L~~~~ 251 (398)
.|.+..
T Consensus 289 ~i~~~~ 294 (301)
T PRK07199 289 ALRREF 294 (301)
T ss_pred HHHHHh
Confidence 997753
No 82
>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=96.33 E-value=0.0024 Score=64.90 Aligned_cols=45 Identities=24% Similarity=0.355 Sum_probs=40.3
Q ss_pred eeCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEec
Q 015926 295 KEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHG 339 (398)
Q Consensus 295 ~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~ 339 (398)
+...++||+|+||||-|--|.|+...++.||++||++|+.-..-+
T Consensus 350 l~~~~~GKrvvlVDDSIVRGtTs~~IVkmlreaGAkeVh~riAsP 394 (474)
T KOG0572|consen 350 LRQNFEGKRVVLVDDSIVRGTTSSPIVKMLREAGAKEVHIRIASP 394 (474)
T ss_pred chhhcCCceEEEEecceeccCchHHHHHHHHHcCCcEEEEEecCC
Confidence 456789999999999999999999999999999999999875433
No 83
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional
Probab=96.20 E-value=0.15 Score=50.35 Aligned_cols=128 Identities=13% Similarity=0.123 Sum_probs=86.9
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHcccc
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKL 165 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~ 165 (398)
..+.+-....+..+|..+|+.+ ++++..+.-.+...++..+.. ...++.|++|+||-.+.+-..-| .-.+++|++.
T Consensus 155 ~~vvv~pd~Ga~~~a~~lA~~l-~~~~~~i~k~r~~~~~~~~~~-~~~~v~Gk~VlIVDDIi~TG~Tl--~~aa~~Lk~~ 230 (285)
T PRK00934 155 DPLVLAPDKGALELAKEAAEIL-GCEYDYLEKTRISPTEVEIAP-KNLDVKGKDVLIVDDIISTGGTM--ATAIKILKEQ 230 (285)
T ss_pred CCEEEEeCCchHHHHHHHHHHh-CCCEEEEEEEecCCCeEEEec-cccccCCCEEEEEcCccccHHHH--HHHHHHHHHC
Confidence 3466666667889999999999 588877666666655433332 23478999999998887654333 3457889999
Q ss_pred CccceEEeecc--CCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHHH
Q 015926 166 FVSSFTLVLPF--FPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLL 243 (398)
Q Consensus 166 gA~~ItaViPY--~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~lL 243 (398)
||++|.++.-+ +.- ...-++.. .|+|.|++.|-+.... + .++.+++|
T Consensus 231 GA~~V~~~~~H~i~~~---------------~a~~~l~~------~~i~~i~~tnti~~~~----~------~~~va~~l 279 (285)
T PRK00934 231 GAKKVYVACVHPVLVG---------------DAILKLYN------AGVDEIIVTDTLESEV----S------KISVAPLI 279 (285)
T ss_pred CCCEEEEEEEeeccCc---------------HHHHHHHh------CCCCEEEEcCCCCCCc----e------EEEcHHHH
Confidence 99999888753 221 11223333 4789999999875221 1 12568899
Q ss_pred HHHHH
Q 015926 244 LNRLQ 248 (398)
Q Consensus 244 a~~L~ 248 (398)
|+.|+
T Consensus 280 a~~i~ 284 (285)
T PRK00934 280 ADLLK 284 (285)
T ss_pred HHHHh
Confidence 98874
No 84
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=95.23 E-value=0.68 Score=46.66 Aligned_cols=142 Identities=14% Similarity=0.076 Sum_probs=91.5
Q ss_pred CCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHccc
Q 015926 85 MKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPK 164 (398)
Q Consensus 85 ~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~ 164 (398)
...+.+-.-.++...|+.+|+.|+++++..+.-++..+++... .....+|.|++|+||-.+.+-... +.-.+++|++
T Consensus 166 ~~~vVVsPD~Ga~~rA~~lA~~L~~~~~~~~~K~R~~~~~~~~-~~~~gdv~Gr~viIVDDIidTG~T--l~~aa~~Lk~ 242 (319)
T PRK04923 166 DNLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPRANVATV-MNIIGDVQGKTCVLVDDLVDTAGT--LCAAAAALKQ 242 (319)
T ss_pred CCCEEEEECCchHHHHHHHHHHcCCCCEEEeccccCCCCceEE-EecccCCCCCEEEEEecccCchHH--HHHHHHHHHH
Confidence 3456666667788999999999933677666555554444332 233468999999999988766433 2455889999
Q ss_pred cCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhh-cccCCCCcccccchHHHH
Q 015926 165 LFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQER-FYFGDTILPCFESAIPLL 243 (398)
Q Consensus 165 ~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~-gfFn~~l~~~~~~a~~lL 243 (398)
.||++|.++.-.-=++ ...+-++.+ +|++.|++-|-...... ...+ .+. .++.+++|
T Consensus 243 ~GA~~V~~~~THgvfs-------------~~a~~~l~~------s~i~~iv~Tdtip~~~~~~~~~-k~~--~isva~ll 300 (319)
T PRK04923 243 RGALKVVAYITHPVLS-------------GPAVDNINN------SQLDELVVTDTIPLSEAARACA-KIR--QLSVAELL 300 (319)
T ss_pred CCCCEEEEEEECcccC-------------chHHHHHhh------CCCCEEEEeCCccCchhhcccC-CeE--EEEhHHHH
Confidence 9999998876553222 122334432 47999999997532111 0101 111 23578999
Q ss_pred HHHHHhCC
Q 015926 244 LNRLQQLP 251 (398)
Q Consensus 244 a~~L~~~~ 251 (398)
|+.|.+..
T Consensus 301 a~~i~~~~ 308 (319)
T PRK04923 301 AETIRRIA 308 (319)
T ss_pred HHHHHHHH
Confidence 99997753
No 85
>PF15609 PRTase_2: Phosphoribosyl transferase
Probab=94.55 E-value=0.056 Score=50.53 Aligned_cols=38 Identities=26% Similarity=0.396 Sum_probs=32.3
Q ss_pred CCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEE
Q 015926 300 RGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVT 337 (398)
Q Consensus 300 ~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~T 337 (398)
..+.+++|||=+|||.|+..+++.|++.-+.+=|++++
T Consensus 120 ~~~~lVLVDDEiSTG~T~lnli~al~~~~p~~~yvvas 157 (191)
T PF15609_consen 120 NARTLVLVDDEISTGNTFLNLIRALHAKYPRKRYVVAS 157 (191)
T ss_pred CCCCEEEEecCccchHHHHHHHHHHHHhCCCceEEEEE
Confidence 36799999999999999999999999987666555553
No 86
>PLN02369 ribose-phosphate pyrophosphokinase
Probab=94.38 E-value=1.4 Score=44.08 Aligned_cols=137 Identities=13% Similarity=0.092 Sum_probs=87.6
Q ss_pred EEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHccccCc
Q 015926 88 VCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFV 167 (398)
Q Consensus 88 ~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~gA 167 (398)
+.+-.-.+...+|+.+++.+.+.++..+..++..++... ......++.|++|+||-.+..-..- +...++++++.||
T Consensus 154 vvVspd~gg~~~a~~~a~~l~~~~~~~l~k~R~~~~~~~-~~~~~~~v~g~~viivDDii~TG~T--l~~a~~~l~~~Ga 230 (302)
T PLN02369 154 VVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQGHNVAE-VMNLIGDVKGKVAIMVDDMIDTAGT--ITKGAALLHQEGA 230 (302)
T ss_pred EEEEECcChHHHHHHHHHHcCCCCEEEEEEecCCcceee-eEecCCCCCCCEEEEEcCcccchHH--HHHHHHHHHhCCC
Confidence 444445557789999999884578877666665444322 2233468999999999877655332 3455788999999
Q ss_pred cceEEee--ccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHHHHH
Q 015926 168 SSFTLVL--PFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLN 245 (398)
Q Consensus 168 ~~ItaVi--PY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~lLa~ 245 (398)
++|.++. |-++- ..+-+ |. .++++.|++.|-+.......|+ .+. .++.+++|++
T Consensus 231 ~~v~~~~tH~v~~~---------------~a~~~-l~-----~~~~~~iv~t~ti~~~~~~~~~-~~~--~~~v~~~la~ 286 (302)
T PLN02369 231 REVYACATHAVFSP---------------PAIER-LS-----SGLFQEVIVTNTIPVSEKNYFP-QLT--VLSVANLLGE 286 (302)
T ss_pred CEEEEEEEeeeeCH---------------HHHHH-HH-----hCCCCEEEEeCCCCChhhcccC-Cce--EEEHHHHHHH
Confidence 9999888 44321 11223 33 2368999999976532111122 221 2357889999
Q ss_pred HHHhCC
Q 015926 246 RLQQLP 251 (398)
Q Consensus 246 ~L~~~~ 251 (398)
.|.+..
T Consensus 287 ~i~~~~ 292 (302)
T PLN02369 287 TIWRVH 292 (302)
T ss_pred HHHHHh
Confidence 997754
No 87
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=94.32 E-value=1.3 Score=44.66 Aligned_cols=136 Identities=12% Similarity=0.031 Sum_probs=86.0
Q ss_pred EEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHccccCc
Q 015926 88 VCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFV 167 (398)
Q Consensus 88 ~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~gA 167 (398)
+.+-.-.....+|+.+|+.| ++++.-+...+ .+.+.. ......+|.|++|+||-.+.+-..- +...+++|++.||
T Consensus 172 vvV~pd~Ga~~~A~~la~~L-~~~~~~~~~~r-~~~~~~-~~~i~gdV~gk~viIVDDIidTG~T--l~~aa~~Lk~~GA 246 (323)
T PRK02458 172 VVVSPKNSGIKRARSLAEYL-DAPIAIIDYAQ-DDSERE-EGYIIGDVAGKKAILIDDILNTGKT--FAEAAKIVEREGA 246 (323)
T ss_pred EEEEECCChHHHHHHHHHHh-CCCEEEEEEec-CCCcce-eeccccccCCCEEEEEcceeCcHHH--HHHHHHHHHhCCC
Confidence 44545556889999999999 58887555333 222211 1123358999999999888765433 3456889999999
Q ss_pred cceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHHHHHHH
Q 015926 168 SSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLNRL 247 (398)
Q Consensus 168 ~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~lLa~~L 247 (398)
++|.++.=..=++ .....++.+ +|+|.|++-|=+..... ..+ .+. .++.++++|+.|
T Consensus 247 ~~V~~~~tHgif~-------------~~a~~~l~~------s~i~~iv~TdTi~~~~~-~~~-k~~--~isva~lla~~i 303 (323)
T PRK02458 247 TEIYAVASHGLFA-------------GGAAEVLEN------APIKEILVTDSVATKER-VPK-NVT--YLSASELIADAI 303 (323)
T ss_pred CcEEEEEEChhcC-------------chHHHHHhh------CCCCEEEEECCcCCchh-cCC-CcE--EEEhHHHHHHHH
Confidence 9999876554222 112223333 47899999997743211 111 111 235689999998
Q ss_pred HhCC
Q 015926 248 QQLP 251 (398)
Q Consensus 248 ~~~~ 251 (398)
.+..
T Consensus 304 ~~~~ 307 (323)
T PRK02458 304 IRIH 307 (323)
T ss_pred HHHH
Confidence 7753
No 88
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=94.13 E-value=1.8 Score=43.31 Aligned_cols=141 Identities=16% Similarity=0.099 Sum_probs=90.1
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHcccc
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKL 165 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~ 165 (398)
..+.+=.......+|+.+|+.| |+++.-+.-.+..+++.. ......++.|++|+||-.+.+-..-| ...++++++.
T Consensus 159 ~~vvv~pd~Gg~~~A~~la~~L-g~~~~~~~k~r~~~~~~~-~~~~~~~~~g~~vliVDDii~TG~T~--~~a~~~l~~~ 234 (309)
T PRK01259 159 NLVVVSPDVGGVVRARALAKRL-DADLAIIDKRRPRANVSE-VMNIIGDVEGRDCILVDDMIDTAGTL--CKAAEALKER 234 (309)
T ss_pred CcEEEEECCCcHHHHHHHHHHh-CCCEEEEEeecccceeEE-EEeecccCCCCEEEEEecccCcHHHH--HHHHHHHHcc
Confidence 3355555666889999999999 688887776666666433 22334679999999998887664433 3557889999
Q ss_pred CccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHHHHH
Q 015926 166 FVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLLLN 245 (398)
Q Consensus 166 gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~lLa~ 245 (398)
|+++|.++.-+.=. +...+-++ . .+++|.|++.|-+.........+.+. .++.++++|+
T Consensus 235 Ga~~v~~~~tH~i~-------------~~~a~~~l-~-----~~~~~~iv~t~ti~~~~~~~~~~k~~--~isva~~ia~ 293 (309)
T PRK01259 235 GAKSVYAYATHPVL-------------SGGAIERI-E-----NSVIDELVVTDSIPLSEEAKKCDKIR--VLSVAPLLAE 293 (309)
T ss_pred CCCEEEEEEEeeeC-------------ChHHHHHH-h-----cCCCCEEEEecCcccchhhccCCCeE--EEEcHHHHHH
Confidence 99999887742211 11122233 3 24789999999764211100001111 2356889999
Q ss_pred HHHhCC
Q 015926 246 RLQQLP 251 (398)
Q Consensus 246 ~L~~~~ 251 (398)
.|.+..
T Consensus 294 ~i~~~~ 299 (309)
T PRK01259 294 AIRRIS 299 (309)
T ss_pred HHHHHh
Confidence 997753
No 89
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional
Probab=94.11 E-value=1.9 Score=43.64 Aligned_cols=134 Identities=8% Similarity=0.027 Sum_probs=80.9
Q ss_pred CeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCccEEEEeeCCCCCCEEEEEeccccc-hHh---HHHHHHHHHHcC
Q 015926 255 NISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQS-GGT---LIECQKVLAAHG 328 (398)
Q Consensus 255 ~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~~~~~~~~g~v~gk~viIVDDii~T-G~T---l~~aa~~Lk~~G 328 (398)
++.+++- .+.-..+.+++. +.++.-+...|-.+++.......++.|++|+||..+... ... +.-++.+||++|
T Consensus 21 ~~~i~~g-~~~~~la~~ia~~lg~~l~~~~~~~FpDGE~~v~i~~~vrg~~V~ivqs~~~p~nd~l~eLll~~~alr~~g 99 (330)
T PRK02812 21 RLRLFSG-SSNPALAQEVARYLGMDLGPMIRKRFADGELYVQIQESIRGCDVYLIQPTCAPVNDHLMELLIMVDACRRAS 99 (330)
T ss_pred CEEEEEC-CCCHHHHHHHHHHhCCCceeeEEEECCCCCEEEEeCCCCCCCEEEEECCCCCCccHHHHHHHHHHHHHHHhC
Confidence 3344432 234444444433 444444444555555533345678999999999997644 333 445778999999
Q ss_pred CCEEEEEEEec-------------cCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhh
Q 015926 329 AAKISAYVTHG-------------IFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASA 395 (398)
Q Consensus 329 A~~V~~~~TH~-------------~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~ 395 (398)
|++|.++.-+- .++-..+-++.+. .|++++++-|-.-....... .-++..++-++.+++.
T Consensus 100 a~ri~~ViPYl~YaRQDr~~~~~e~isak~vA~lL~~------~g~d~vitvDlH~~~~~~fF-~ipv~nl~~~~~l~~~ 172 (330)
T PRK02812 100 ARQITAVIPYYGYARADRKTAGRESITAKLVANLITK------AGADRVLAMDLHSAQIQGYF-DIPCDHVYGSPVLLDY 172 (330)
T ss_pred CceEEEEEecccccccccccCCCCCchHHHHHHHHHh------cCCCEEEEEECCchHHcCcc-CCCceeeeChHHHHHH
Confidence 99999987332 1122334444443 27999999996432111111 2356789999999998
Q ss_pred c
Q 015926 396 L 396 (398)
Q Consensus 396 I 396 (398)
|
T Consensus 173 i 173 (330)
T PRK02812 173 L 173 (330)
T ss_pred H
Confidence 7
No 90
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]
Probab=93.92 E-value=0.34 Score=48.66 Aligned_cols=139 Identities=12% Similarity=0.066 Sum_probs=90.8
Q ss_pred cEEEEe-CCCCHHHHHHHHHHhCCCceeeeEEEee-CCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHccc
Q 015926 87 KVCLFY-CPETHSLAERVAAQSDAIELRSINWRKF-KDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPK 164 (398)
Q Consensus 87 ~~~lfs-g~s~~~LA~~Ia~~l~~~~l~~~~~~~F-pDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~ 164 (398)
+..|.| -.+.-..|+.+|+.| +.++.-+.-+|- .+++.++... ..+|+||+|+||-.+-+-.- -+.-.+++|++
T Consensus 164 d~vVVSPD~Ggv~RAr~~A~~L-~~~~a~i~K~R~~~~~~v~~~~~-~gdV~gk~~iiVDDiIdTgG--Ti~~Aa~~Lk~ 239 (314)
T COG0462 164 DPVVVSPDKGGVKRARALADRL-GAPLAIIDKRRDSSPNVVEVMNL-IGDVEGKDVVIVDDIIDTGG--TIAKAAKALKE 239 (314)
T ss_pred CcEEECCCccHHHHHHHHHHHh-CCCEEEEEEeecCCCCeEEEeec-ccccCCCEEEEEeccccccH--HHHHHHHHHHH
Confidence 334433 334678999999999 589999988887 6666555443 47899999999987644321 13556889999
Q ss_pred cCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCch-hhhcccCCCCcccccchHHHH
Q 015926 165 LFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHAL-QERFYFGDTILPCFESAIPLL 243 (398)
Q Consensus 165 ~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~-q~~gfFn~~l~~~~~~a~~lL 243 (398)
.||++|.++.-.-=++ ....+.+++ ..++.||+-|--.. ..+-+ . ++. .++.++++
T Consensus 240 ~GAk~V~a~~tH~vfs--------------~~a~~~l~~-----~~i~~vivTnTi~~~~~~~~-~-~~~--~isva~li 296 (314)
T COG0462 240 RGAKKVYAAATHGVFS--------------GAALERLEA-----SAIDEVIVTDTIPLPEKKKI-P-KVS--VISVAPLI 296 (314)
T ss_pred CCCCeEEEEEEchhhC--------------hHHHHHHhc-----CCCCEEEEeCCccccccccc-C-ceE--EEEhHHHH
Confidence 9999998876433222 223355653 24789998884221 21111 1 111 34679999
Q ss_pred HHHHHhCCC
Q 015926 244 LNRLQQLPD 252 (398)
Q Consensus 244 a~~L~~~~~ 252 (398)
|+.|.+..+
T Consensus 297 aeaI~ri~~ 305 (314)
T COG0462 297 AEAIRRIHN 305 (314)
T ss_pred HHHHHHHHc
Confidence 999988653
No 91
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=93.67 E-value=1.6 Score=45.91 Aligned_cols=136 Identities=12% Similarity=0.011 Sum_probs=81.3
Q ss_pred CCeEEEeeCCCchhhHHHhhc--CCCeEEEEEEEcCCccEEEEeeCCCCCCEEEEEeccccc-hH---hHHHHHHHHHHc
Q 015926 254 DNISIAFPDDGAWKRFHKQLQ--HFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQS-GG---TLIECQKVLAAH 327 (398)
Q Consensus 254 ~~~vVVaPD~Ga~~Ra~~~~~--~~~~~v~~K~R~~~~~~~~~~~g~v~gk~viIVDDii~T-G~---Tl~~aa~~Lk~~ 327 (398)
++.+|++- .+.-..+..++. +.++.-+.-.|-.+++.......++.|++|+||-++... -. -+.-++.+|+++
T Consensus 118 ~~m~I~sg-s~~~~LA~~IA~~Lg~~l~~~~~~rFpDGE~~Vri~e~VrG~dV~IVqS~~~pvNd~LmELLllidAlr~a 196 (439)
T PTZ00145 118 ENAILFSG-SSNPLLSKNIADHLGTILGRVHLKRFADGEVSMQFLESIRGKDVYIIQPTCPPVNENLIELLLMISTCRRA 196 (439)
T ss_pred CCeEEEEC-CCCHHHHHHHHHHhCCCceeeEEEECCCCCEEEEECCCcCCCeEEEEecCCCCCcHHHHHHHHHHHHHHHh
Confidence 44455543 233344444433 455544555565565543345678999999999987654 22 344577899999
Q ss_pred CCCEEEEEEEecc-------------CCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccC-CCCeEEEechHHHH
Q 015926 328 GAAKISAYVTHGI-------------FPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMS-KPPFEVLSLAGSIA 393 (398)
Q Consensus 328 GA~~V~~~~TH~~-------------~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~-~~k~~vlsva~liA 393 (398)
||++|.++.-+-- ++-..+-+|.+. .|+++|++.|-.-........ .-++..++..+.++
T Consensus 197 gAkrItlViPYl~YaRQDR~~~~gepIsak~vA~lL~~------~G~d~VitvDlHs~~i~~fF~~~iPvdnl~a~~~~a 270 (439)
T PTZ00145 197 SAKKITAVIPYYGYARQDRKLSSRVPISAADVARMIEA------MGVDRVVAIDLHSGQIQGFFGPRVPVDNLEAQLIGL 270 (439)
T ss_pred ccCeEEEEeecccchheecccCCCCChhHHHHHHHHHH------cCCCeEEEEecChHHHHhhcCCCcccccccccHHHH
Confidence 9999999883321 112233444443 279999999965321111121 12566777788888
Q ss_pred hhc
Q 015926 394 SAL 396 (398)
Q Consensus 394 e~I 396 (398)
+.|
T Consensus 271 ~~i 273 (439)
T PTZ00145 271 DYF 273 (439)
T ss_pred HHH
Confidence 766
No 92
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=93.62 E-value=1.1 Score=41.36 Aligned_cols=94 Identities=11% Similarity=0.088 Sum_probs=65.3
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCc--eeeeEEEeeCC-----CceeEEecCCCCCCCceEEEEEecCCChhHHHHHHH
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIE--LRSINWRKFKD-----GFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSV 158 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~--l~~~~~~~FpD-----GE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~ 158 (398)
..+.|=-...+-.+|..+++.| +++ +..+....|-| |+..+.-....+++|++|+||-.+.+-...|. .+
T Consensus 35 ~~vvvgI~~Gg~~fa~~L~~~L-~~~~~v~~l~~ssY~~~~~~~~~v~i~~~~~~~v~gk~VLlVDDIiDTG~TL~--~l 111 (178)
T PRK15423 35 DMVLVGLLRGSFMFMADLCREV-QVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLS--KV 111 (178)
T ss_pred CeEEEEEecCChHHHHHHHHHh-CCCcceeEEEEEEecCCCcccCceEEecCCCCCCCCCEEEEEeeecCchHHHH--HH
Confidence 3455555677889999999999 575 55788899964 44444444456899999999998877655443 44
Q ss_pred HHHccccCccceEEeec-cCCCCCc
Q 015926 159 IYALPKLFVSSFTLVLP-FFPTGTS 182 (398)
Q Consensus 159 i~alr~~gA~~ItaViP-Y~~YsRQ 182 (398)
.+.++..|++++..+.- +-+-.|+
T Consensus 112 ~~~l~~~~~~~v~~avL~~K~~~r~ 136 (178)
T PRK15423 112 REILSLREPKSLAICTLLDKPSRRE 136 (178)
T ss_pred HHHHHhCCCCEEEEEEEEECCCCCc
Confidence 56678888888855443 3444443
No 93
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=93.37 E-value=1.9 Score=43.45 Aligned_cols=114 Identities=14% Similarity=0.108 Sum_probs=70.4
Q ss_pred CCeEEEEEEEcCCccEEEEeeCCCCCCEEEEEeccccc-h---HhHHHHHHHHHHcCCCEEEEEEEec------------
Q 015926 276 FPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQS-G---GTLIECQKVLAAHGAAKISAYVTHG------------ 339 (398)
Q Consensus 276 ~~~~v~~K~R~~~~~~~~~~~g~v~gk~viIVDDii~T-G---~Tl~~aa~~Lk~~GA~~V~~~~TH~------------ 339 (398)
.++.-+...|-.+++.......++.|++|+||-.+... - -.+.-++.+||++||++|.++.-+-
T Consensus 27 ~~l~~~~~~~FpdGE~~v~i~~~vrg~dV~iv~s~~~~~nd~lmelll~~~alr~~~a~~i~~V~PYl~YaRQDr~~~~~ 106 (320)
T PRK02269 27 IELGKSSVRQFSDGEIQVNIEESIRGHHVFILQSTSSPVNDNLMEILIMVDALKRASAESINVVMPYYGYARQDRKARSR 106 (320)
T ss_pred CceeeeEEEECCCCCEEEEECCCCCCCEEEEEecCCCCccchHHHHHHHHHHHHHhCCCeEEEEEeccccchhhcccCCC
Confidence 34433444454555533344678999999999886543 2 2455678999999999999887321
Q ss_pred -cCCchHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhc
Q 015926 340 -IFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASAL 396 (398)
Q Consensus 340 -~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I 396 (398)
.++-..+-++.+. .|++++++.|-.-........ -++..++..+++++.|
T Consensus 107 e~isak~~a~ll~~------~g~d~vit~D~H~~~~~~~f~-~p~~~l~~~p~l~~~i 157 (320)
T PRK02269 107 EPITSKLVANMLEV------AGVDRLLTVDLHAAQIQGFFD-IPVDHLMGAPLIADYF 157 (320)
T ss_pred CCchHHHHHHHHhh------cCCCEEEEECCChHHHhcccc-CCchhhhhHHHHHHHH
Confidence 1112233344433 379999999965321111121 2456688888888876
No 94
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional
Probab=93.23 E-value=3 Score=42.25 Aligned_cols=113 Identities=12% Similarity=0.109 Sum_probs=71.5
Q ss_pred CCCeEEEEEEEcCCccEEEEeeCCCCCCEEEEEeccccc-hHh---HHHHHHHHHHcCCCEEEEEEEeccCC--------
Q 015926 275 HFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQS-GGT---LIECQKVLAAHGAAKISAYVTHGIFP-------- 342 (398)
Q Consensus 275 ~~~~~v~~K~R~~~~~~~~~~~g~v~gk~viIVDDii~T-G~T---l~~aa~~Lk~~GA~~V~~~~TH~~~s-------- 342 (398)
+.++.-+...|-.+++.......++.|++|+||-++... ... +.-++.+|+++||++|.++. |.|.
T Consensus 30 g~~l~~~~~~~FpdGE~~v~i~~~vrg~dV~ivqs~~~p~nd~l~eLll~~~alr~~~a~~i~~Vi--PYl~YaRQDr~~ 107 (332)
T PRK00553 30 SMKPGEIVIQKFADGETYIRFDESVRNKDVVIFQSTCSPVNDSLMELLIAIDALKRGSAKSITAIL--PYYGYARQDRKT 107 (332)
T ss_pred CCceeeeEEEECCCCCEEEEECCCCCCCEEEEEcCCCCCCchHHHHHHHHHHHHHHcCCCeEEEEe--eccccchhhccc
Confidence 344444445555555544445678999999999987653 222 45577899999999999987 3332
Q ss_pred -------chHHHHHhhcCCCCCCCCccEEEEccCcccccccccCCCCeEEEechHHHHhhc
Q 015926 343 -------NASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASAL 396 (398)
Q Consensus 343 -------~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~~~~~~~k~~vlsva~liAe~I 396 (398)
-..+-++.+. .|++++++.|-.-....... .-++.-++..++|++.+
T Consensus 108 ~~~e~isak~vA~ll~~------~g~d~vit~DlH~~~i~~~F-~ipv~~l~a~~~~~~~~ 161 (332)
T PRK00553 108 AGREPITSKLVADLLTK------AGVTRVTLTDIHSDQTQGFF-DIPVDILRTYHVFLSRV 161 (332)
T ss_pred CCCCCccHHHHHHHHHh------cCCCEEEEEeCChHHHHhhc-CCCcceeechHHHHHHH
Confidence 2223334332 37999999996432111112 23566678888888776
No 95
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=91.97 E-value=1.4 Score=43.98 Aligned_cols=141 Identities=13% Similarity=0.073 Sum_probs=89.6
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCC--CceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHcc
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKD--GFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALP 163 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpD--GE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr 163 (398)
..+.|-.-.....+|+.+++.|+..++..+...+..+ |+.. ......+|.|++|+||-.+.+-..-| ...++.|+
T Consensus 149 ~~vvVspd~Ga~~~a~~la~~L~~~~~~~i~k~R~~~~~~~~~-~~~~~~dv~gr~viIVDDIi~TG~Tl--~~aa~~Lk 225 (304)
T PRK03092 149 NVTVVSPDAGRVRVAEQWADRLGGAPLAFIHKTRDPTVPNQVV-ANRVVGDVEGRTCVLVDDMIDTGGTI--AGAVRALK 225 (304)
T ss_pred CcEEEEecCchHHHHHHHHHHcCCCCEEEEEEEcccCCCCceE-EEecCcCCCCCEEEEEccccCcHHHH--HHHHHHHH
Confidence 3455555666778999999999327888777666543 3322 33445689999999998887654332 35578899
Q ss_pred ccCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCchhhhcccCCCCcccccchHHHH
Q 015926 164 KLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESAIPLL 243 (398)
Q Consensus 164 ~~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~q~~gfFn~~l~~~~~~a~~lL 243 (398)
+.||++|.++.-+-=. +...+-++.. +|+|.|++.|-+....... ...+. .++.++++
T Consensus 226 ~~Ga~~I~~~~tH~v~-------------~~~a~~~l~~------~~~~~i~~t~tip~~~~~~-~~~~~--~~sva~~l 283 (304)
T PRK03092 226 EAGAKDVIIAATHGVL-------------SGPAAERLKN------CGAREVVVTDTLPIPEEKR-FDKLT--VLSIAPLL 283 (304)
T ss_pred hcCCCeEEEEEEcccC-------------ChHHHHHHHH------CCCCEEEEeeeeccchhhc-CCCeE--EEEhHHHH
Confidence 9999999988832211 1112334443 4789999999753211000 01111 23568899
Q ss_pred HHHHHhCC
Q 015926 244 LNRLQQLP 251 (398)
Q Consensus 244 a~~L~~~~ 251 (398)
|+.|....
T Consensus 284 a~~i~~~~ 291 (304)
T PRK03092 284 ARAIREVF 291 (304)
T ss_pred HHHHHHHH
Confidence 99997754
No 96
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=91.93 E-value=1.9 Score=39.63 Aligned_cols=88 Identities=6% Similarity=0.072 Sum_probs=61.3
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCce--eeeEEEeeCCCce----eEEecCCCCCCCceEEEEEecCCChhHHHHHHHHH
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIEL--RSINWRKFKDGFP----NLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIY 160 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l--~~~~~~~FpDGE~----~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~ 160 (398)
.+.|=.......+|..+|+.| ++++ ..+...++.+++. .+.+....+++|++|+||-.+......++ .+++
T Consensus 42 ~viV~i~~gg~~~A~~La~~l-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~gk~VLIVDDIidTG~Tl~--~~~~ 118 (181)
T PRK09162 42 PLVLCVMGGGLVFTGQLLPRL-DFPLEFDYLHATRYRNETTGGELVWKVKPRESLKGRTVLVVDDILDEGHTLA--AIRD 118 (181)
T ss_pred eEEEEECCCcHHHHHHHHHHc-CCCcccCEEEEEecCCCccCCceeEecCCCCCCCCCEEEEEccccCcHHHHH--HHHH
Confidence 456666777889999999999 5765 3455666665432 22233345799999999988776654442 4467
Q ss_pred HccccCccceEEeeccC
Q 015926 161 ALPKLFVSSFTLVLPFF 177 (398)
Q Consensus 161 alr~~gA~~ItaViPY~ 177 (398)
.|++.||++|.++.-+-
T Consensus 119 ~Lk~~Ga~~V~~avL~~ 135 (181)
T PRK09162 119 RCLEMGAAEVYSAVLVD 135 (181)
T ss_pred HHHhCCCCEEEEEEEEE
Confidence 78899999998876543
No 97
>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B ....
Probab=90.31 E-value=5.9 Score=34.04 Aligned_cols=64 Identities=17% Similarity=0.219 Sum_probs=37.7
Q ss_pred CeEEEEEEEcCCccEEEEeeCCCCCCEEEEEeccccch-H---hHHHHHHHHHHcCCCEEEEEEEeccCC
Q 015926 277 PMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSG-G---TLIECQKVLAAHGAAKISAYVTHGIFP 342 (398)
Q Consensus 277 ~~~v~~K~R~~~~~~~~~~~g~v~gk~viIVDDii~TG-~---Tl~~aa~~Lk~~GA~~V~~~~TH~~~s 342 (398)
++.-+.-.|-.+++......++++|++|+||-++...= . .+.-+++++++.||++|.++. |.|.
T Consensus 23 ~~~~~~~~~F~dGE~~v~i~~~v~g~dv~iiqs~~~~~nd~lmeLll~i~a~r~~~a~~i~~Vi--PYl~ 90 (116)
T PF13793_consen 23 PLGKVETKRFPDGETYVRIPESVRGKDVFIIQSTSPPVNDNLMELLLLIDALRRAGAKRITLVI--PYLP 90 (116)
T ss_dssp -EE-EEEEE-TTS-EEEEESS--TTSEEEEE---SSSHHHHHHHHHHHHHHHHHTTBSEEEEEE--SS-T
T ss_pred ceeeeEEEEcCCCCEEEEecccccCCceEEEEecCCchhHHHHHHHHHHHHHHHcCCcEEEEec--cchh
Confidence 33333344444444333446789999999999999762 2 455678999999999999998 5553
No 98
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=89.35 E-value=5.6 Score=36.09 Aligned_cols=89 Identities=12% Similarity=0.110 Sum_probs=60.6
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCc--eeeeEEEeeCCC-----ceeEEecCCCCCCCceEEEEEecCCChhHHHHHHH
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIE--LRSINWRKFKDG-----FPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSV 158 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~--l~~~~~~~FpDG-----E~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~ 158 (398)
+.+.+=...+.-.+|..+++.| +.+ +..+....|-|+ +..+..+...++.|++|+||-.+..-..-| ..+
T Consensus 27 ~~vvv~i~~GG~~~a~~l~~~L-~~~~~v~~i~~~~Y~~~~~~~~~~~~~~~~~~~~~gk~vlivDDii~TG~Tl--~~~ 103 (166)
T TIGR01203 27 PLVLLCVLKGSFPFFADLIRYI-AVPVQVDFMAVSSYGNGMQSSGDVKILKDLDLSIKGKDVLIVEDIVDTGLTL--QYL 103 (166)
T ss_pred CeEEEEEccCCHHHHHHHHHhc-CCCceeeEEEEeeccCCCcccCceEEecCCCCCCCCCEEEEEeeeeCcHHHH--HHH
Confidence 3455555667889999999999 454 556777777644 233333345689999999998887654332 234
Q ss_pred HHHccccCccceEEeeccC
Q 015926 159 IYALPKLFVSSFTLVLPFF 177 (398)
Q Consensus 159 i~alr~~gA~~ItaViPY~ 177 (398)
+++|+..|+++|.++.-+.
T Consensus 104 ~~~l~~~g~~~i~~~~l~~ 122 (166)
T TIGR01203 104 LDLLKARKPKSLKIVTLLD 122 (166)
T ss_pred HHHHHHCCCCEEEEEEEEe
Confidence 5677888998887766444
No 99
>PLN02297 ribose-phosphate pyrophosphokinase
Probab=88.52 E-value=15 Score=37.34 Aligned_cols=117 Identities=12% Similarity=0.031 Sum_probs=68.1
Q ss_pred CCCeEEEEEEEcCCcc--EEEEeeCCCCCCEEEEEeccccchHhHH---HHHHHHHHcCCCEEEEEEEec-------cCC
Q 015926 275 HFPMIVCNKVRDGNQR--IVRIKEGDPRGRHIVIVDDLVQSGGTLI---ECQKVLAAHGAAKISAYVTHG-------IFP 342 (398)
Q Consensus 275 ~~~~~v~~K~R~~~~~--~~~~~~g~v~gk~viIVDDii~TG~Tl~---~aa~~Lk~~GA~~V~~~~TH~-------~~s 342 (398)
+.++.-++..|-.+++ +......++.|++|+||-.+.+. ..+. -++.+|+++||++|.++.-+- .|.
T Consensus 38 g~~l~~~~~~~FpDGE~~v~v~~~~~vrg~~V~ivqs~~~p-d~lmELLl~~dAlr~~ga~~i~~ViPY~~YaRQDr~~~ 116 (326)
T PLN02297 38 AIELGSINWRKFPDGFPNLFINNAHGIRGQHVAFLASFSSP-AVIFEQLSVIYALPKLFVASFTLVLPFFPTGTSERVER 116 (326)
T ss_pred CCceeeeEEEECCCCCEEEEEcCCCCcCCCeEEEECCCCCC-hHHHHHHHHHHHHHHcCCCEEEEEeeCChhhcCCCCCC
Confidence 3455555555655553 22223468999999999886644 4444 467899999999999988322 111
Q ss_pred ------chHHHHHhhcCCCCCC--CCccEEEEccCcccccccccCCCCeE--EEechHHHHhhc
Q 015926 343 ------NASWERFKQDTGGKPE--SGLTYFWISDSCPVTVKEVMSKPPFE--VLSLAGSIASAL 396 (398)
Q Consensus 343 ------~~a~~~l~~~~~~~~~--~~~~~iv~tdtip~~~~~~~~~~k~~--vlsva~liAe~I 396 (398)
-..+-++.+. .+. .|++++++.|-.-....... ..++. .++..+.|+++|
T Consensus 117 ~ge~isak~vA~ll~~---~~~~~~g~d~vitvDlH~~~~~~fF-~~~~~~l~l~a~~~l~~~i 176 (326)
T PLN02297 117 EGDVATAFTLARILSN---IPISRGGPTSLVIFDIHALQERFYF-GDNVLPCFESGIPLLKKRL 176 (326)
T ss_pred CCCCchHHHHHHHHhc---ccccccCCCEEEEEeCCChHHCCcc-CCcccchhhccHHHHHHHH
Confidence 1223344332 000 27899999996532111111 12233 237788999887
No 100
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional
Probab=88.51 E-value=3.2 Score=43.00 Aligned_cols=143 Identities=10% Similarity=-0.009 Sum_probs=88.6
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCcee-----EEecC-CCCCCCceEEEEEecCCChhHHHHHHHH
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPN-----LFIPN-AHGIRGQHVAFLASFSSPGKIFEQLSVI 159 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~-----v~i~~-~~~VrG~dV~ivqs~~~pd~lmELll~i 159 (398)
..+.+-.-.+....|+.+|..| |.++.-+.-.+..+++.+ +.... ..+|.|++|+||-.+.+-..- +.-.+
T Consensus 208 ~~VVVsPD~Gg~~rA~~~A~~L-g~~~ai~~K~R~~~~~~~g~~~~~~~~~~g~dV~gr~vIIVDDII~TG~T--l~~aa 284 (382)
T PRK06827 208 HLMVISPDTGAMDRAKYYASVL-GVDLGLFYKRRDYSRVVNGRNPIVAHEFLGRDVEGKDVLIVDDMIASGGS--MIDAA 284 (382)
T ss_pred CcEEEEECccchHHHHHHHHHh-CCCEEEEEcccCCcccccCCCceEEEecCCcccCCCEEEEEeCCcCcHHH--HHHHH
Confidence 3455555555778999999999 588877666654333221 22222 237999999999888765432 35568
Q ss_pred HHccccCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCc--hhhhcccCCCCccccc
Q 015926 160 YALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHA--LQERFYFGDTILPCFE 237 (398)
Q Consensus 160 ~alr~~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs--~q~~gfFn~~l~~~~~ 237 (398)
..|++.||++|.++....-++ ..+-++.+... ..+++.|++-|-+. ...... +.+. .+
T Consensus 285 ~~Lk~~GA~~V~~~~tH~vf~--------------~a~~~l~~~~~--~g~i~~iv~TdTi~~~~~~~~~--~~~~--~i 344 (382)
T PRK06827 285 KELKSRGAKKIIVAATFGFFT--------------NGLEKFDKAYE--EGYFDRIIGTNLVYHPEELLSK--PWYI--EV 344 (382)
T ss_pred HHHHHcCCCEEEEEEEeecCh--------------HHHHHHHhhcc--cCCCCEEEEeCCCcCchhhccc--CCeE--EE
Confidence 889999999998877664333 12334443211 23489999999542 221110 1111 23
Q ss_pred chHHHHHHHHHhCC
Q 015926 238 SAIPLLLNRLQQLP 251 (398)
Q Consensus 238 ~a~~lLa~~L~~~~ 251 (398)
+.+++||+.|.+..
T Consensus 345 sva~llA~~I~~~~ 358 (382)
T PRK06827 345 DMSKLIARIIDALN 358 (382)
T ss_pred EcHHHHHHHHHHHH
Confidence 57899999997754
No 101
>KOG1017 consensus Predicted uracil phosphoribosyltransferase [General function prediction only]
Probab=88.33 E-value=1.3 Score=41.80 Aligned_cols=69 Identities=19% Similarity=0.314 Sum_probs=47.1
Q ss_pred eCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCC-EEEEEEEeccCC-chHHHHHhhcCCCCCCCCccEEEEccCccc
Q 015926 296 EGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAA-KISAYVTHGIFP-NASWERFKQDTGGKPESGLTYFWISDSCPV 372 (398)
Q Consensus 296 ~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~-~V~~~~TH~~~s-~~a~~~l~~~~~~~~~~~~~~iv~tdtip~ 372 (398)
..|+--|+|++.=-+++||.|+.+|++.|+++|.. ++..++. +|. +-+.+.+-..- +-=.|+.++-.|.
T Consensus 184 ppDI~sR~VLLmYPi~stGnTV~~Av~VL~EhgVp~s~IiL~s--LF~tP~gak~i~~~f------P~itiltseihpv 254 (267)
T KOG1017|consen 184 PPDITSRRVLLMYPIISTGNTVCKAVEVLKEHGVPDSNIILVS--LFITPTGAKNITRKF------PYITILTSEIHPV 254 (267)
T ss_pred CCcccceeEEEEeeeecCCccHHHHHHHHHHcCCCcccEEEEE--eeecchhhHHHHHhC------CeEEEEeecceec
Confidence 56888999999999999999999999999999965 3444332 333 33445555431 1224555555554
No 102
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=84.93 E-value=13 Score=34.46 Aligned_cols=88 Identities=13% Similarity=0.118 Sum_probs=60.2
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCC---ce--eeeEEEeeCCC-----ceeEEe-cCCCCCCCceEEEEEecCCChhHHHH
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAI---EL--RSINWRKFKDG-----FPNLFI-PNAHGIRGQHVAFLASFSSPGKIFEQ 155 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~---~l--~~~~~~~FpDG-----E~~v~i-~~~~~VrG~dV~ivqs~~~pd~lmEL 155 (398)
.+.+=....+-.+|..+++.| +. ++ ..+..++|.+| +..+.. ....+++|++|+||-.+.+....|
T Consensus 37 ~vivgi~~Gg~~fa~~L~~~L-~~~~~~~~i~fi~~~sy~~~~~~~g~~~i~~~~~~~~v~gk~VliVDDIidTG~Tl-- 113 (189)
T PLN02238 37 PVVLGVATGAFMFLADLVRAI-QPLPRGLTVDFIRASSYGGGTESSGVAKVSGADLKIDVKGKHVLLVEDIVDTGNTL-- 113 (189)
T ss_pred cEEEEEccCCHHHHHHHHHHh-CccCCCeEEEEEEeeecCCCccccCceeEecCCCCCCCCCCEEEEEecccchHHHH--
Confidence 455555667788999999999 45 33 45777778653 333433 334679999999998876654333
Q ss_pred HHHHHHccccCccceEEeeccC
Q 015926 156 LSVIYALPKLFVSSFTLVLPFF 177 (398)
Q Consensus 156 ll~i~alr~~gA~~ItaViPY~ 177 (398)
..+++++++.|++++.++.-+.
T Consensus 114 ~~~~~~l~~~g~~~v~~avL~d 135 (189)
T PLN02238 114 SALVAHLEAKGAASVSVCALLD 135 (189)
T ss_pred HHHHHHHHhCCCCEEEEEEEEE
Confidence 3345778888999987765443
No 103
>PLN02440 amidophosphoribosyltransferase
Probab=83.01 E-value=11 Score=40.13 Aligned_cols=126 Identities=14% Similarity=0.109 Sum_probs=73.2
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCceee-eEEEeeC------------CCceeEEecC-CCCCCCceEEEEEecCCChh
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIELRS-INWRKFK------------DGFPNLFIPN-AHGIRGQHVAFLASFSSPGK 151 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~-~~~~~Fp------------DGE~~v~i~~-~~~VrG~dV~ivqs~~~pd~ 151 (398)
-++.+-.-.+...+|..+++.+ |+|+.. ....++. ++....++.. ...+.||+|+||-....-..
T Consensus 276 ~d~vvpVP~s~~~~A~~la~~l-giP~~~~lvr~ry~~rt~i~~~q~~r~~~~~~k~~~~~~~v~gk~VlLVDDiittGt 354 (479)
T PLN02440 276 CDVVIPVPDSGRVAALGYAAKL-GVPFQQGLIRSHYVGRTFIEPSQKIRDFSVKLKLNPVRSVLEGKRVVVVDDSIVRGT 354 (479)
T ss_pred CCEEEEeCCcHHHHHHHHHHHh-CCCchhheEEEeeccccccCcchhhhhhhheeeeecccccccCceEEEEeceeCcHH
Confidence 3566666666778999999999 688753 2223443 1222233322 24589999999976654433
Q ss_pred HHHHHHHHHHccccCccceEEeeccCC--------CCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCch
Q 015926 152 IFEQLSVIYALPKLFVSSFTLVLPFFP--------TGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHAL 222 (398)
Q Consensus 152 lmELll~i~alr~~gA~~ItaViPY~~--------YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs~ 222 (398)
.+ --+++.|+++||++|.+++---| ..=.+|.+.-+--....-+++.| |+|.+..+.+...
T Consensus 355 Tl--~~i~~~L~~aGa~~V~v~v~~p~~~~p~~~G~d~p~~~~li~~~~~~~ei~~~~--------~~dsl~~l~~~~l 423 (479)
T PLN02440 355 TS--SKIVRMLREAGAKEVHMRIASPPIIASCYYGVDTPSREELISNRMSVEEIRKFI--------GCDSLAFLPLEDL 423 (479)
T ss_pred HH--HHHHHHHHhcCCCEEEEEEECCcccccceeeccCCCHHHHhhcCCCHHHHHHHh--------CCCEEEEecHHHH
Confidence 33 23578899999999877665322 22223332111112333444444 6888887776543
No 104
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=81.71 E-value=15 Score=34.47 Aligned_cols=86 Identities=10% Similarity=0.081 Sum_probs=59.1
Q ss_pred EEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCC--CceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHcccc
Q 015926 88 VCLFYCPETHSLAERVAAQSDAIELRSINWRKFKD--GFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKL 165 (398)
Q Consensus 88 ~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpD--GE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~ 165 (398)
+.|=-..+...+++.+++.++.++++.+...+... +....+.+...++.|++|+|+-.+-.-..- +..+++.+++.
T Consensus 73 vvV~IlrgG~~~~~~l~~~l~~~~~~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~T--l~~ai~~L~~~ 150 (209)
T PRK00129 73 VIVPILRAGLGMVDGVLKLIPSARVGHIGLYRDEETLEPVEYYVKLPEDIDERTVIVVDPMLATGGS--AIAAIDLLKKR 150 (209)
T ss_pred EEEEEeCCCHHHHHHHHHhCCcCeeeeEEEEeCCCCCCCEEEEeeCCCcCCCCEEEEECCcccchHH--HHHHHHHHHHc
Confidence 44445677889999999999656777776655422 112234445678999999998877554322 24456778888
Q ss_pred CccceEEeec
Q 015926 166 FVSSFTLVLP 175 (398)
Q Consensus 166 gA~~ItaViP 175 (398)
|+++|.++.-
T Consensus 151 G~~~I~~~~l 160 (209)
T PRK00129 151 GAKNIKVLCL 160 (209)
T ss_pred CCCEEEEEEE
Confidence 9999988775
No 105
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=81.32 E-value=21 Score=33.90 Aligned_cols=88 Identities=8% Similarity=0.097 Sum_probs=59.5
Q ss_pred cEEEEeCCCCHHHHHHHHHHhC--C--CceeeeEEEeeCCC-----ceeEEecCCCCCCCceEEEEEecCCChhHHHHHH
Q 015926 87 KVCLFYCPETHSLAERVAAQSD--A--IELRSINWRKFKDG-----FPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLS 157 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~--~--~~l~~~~~~~FpDG-----E~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll 157 (398)
.+.|=-.+.+-.+|..+++.|+ + +++..+.+..|-|| +..+......+++|++|+||-.+-.....| ..
T Consensus 59 ~vivgVlkGg~~fa~dL~r~L~~~~~~~~vdfi~vssY~~~~~s~g~~~i~~~~~~~i~gk~VLIVDDIvDTG~TL--~~ 136 (211)
T PTZ00271 59 LYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGTGVETSGQVRMLLDVRDSVENRHILIVEDIVDSAITL--QY 136 (211)
T ss_pred eEEEEEcCCCHHHHHHHHHHhcccCCCeeEEEEEEEecCCCCcccCceEEecCCCCCCCCCEEEEEecccCCHHHH--HH
Confidence 3455556778899999999883 1 34677888888764 334444456789999999998876654333 33
Q ss_pred HHHHccccCccceEEeecc
Q 015926 158 VIYALPKLFVSSFTLVLPF 176 (398)
Q Consensus 158 ~i~alr~~gA~~ItaViPY 176 (398)
+++.|++.++++|..+.-+
T Consensus 137 v~~~l~~~~p~svk~avL~ 155 (211)
T PTZ00271 137 LMRFMLAKKPASLKTVVLL 155 (211)
T ss_pred HHHHHHhcCCCEEEEEEEE
Confidence 4566666788888544433
No 106
>PRK02304 adenine phosphoribosyltransferase; Provisional
Probab=79.92 E-value=13 Score=33.66 Aligned_cols=81 Identities=14% Similarity=0.055 Sum_probs=51.5
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEe-eC-----------CCceeEEecCCCCCCCceEEEEEecCCChhHHH
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINWRK-FK-----------DGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFE 154 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~-Fp-----------DGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmE 154 (398)
.+.+=...+.-.+|..+|..+ ++++..+.-.+ ++ .|+..+++.....++|++|+||-.+..-..-
T Consensus 53 d~Ivgv~~~Gi~~a~~la~~l-~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~g~~VLIVDDivtTG~T-- 129 (175)
T PRK02304 53 DKIVGIEARGFIFGAALAYKL-GIGFVPVRKPGKLPRETISESYELEYGTDTLEIHKDAIKPGDRVLIVDDLLATGGT-- 129 (175)
T ss_pred CEEEEEccchHHHHHHHHHHh-CCCEEEEEcCCCCCCceEeEEEecccCceEEEEchhhcCCCCEEEEEeCCccccHH--
Confidence 344434456779999999999 58876432221 11 2344555543334899999999887765332
Q ss_pred HHHHHHHccccCccce
Q 015926 155 QLSVIYALPKLFVSSF 170 (398)
Q Consensus 155 Lll~i~alr~~gA~~I 170 (398)
+.-+++.++++||+.+
T Consensus 130 l~~~~~~l~~~Ga~~v 145 (175)
T PRK02304 130 LEAAIKLLERLGAEVV 145 (175)
T ss_pred HHHHHHHHHHcCCEEE
Confidence 2445677788898765
No 107
>TIGR01090 apt adenine phosphoribosyltransferase. A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.
Probab=79.37 E-value=14 Score=33.32 Aligned_cols=84 Identities=12% Similarity=-0.021 Sum_probs=51.8
Q ss_pred EEEEeCCCCHHHHHHHHHHhCCCceeeeEEEee------------CCCceeEEecCCCCCCCceEEEEEecCCChhHHHH
Q 015926 88 VCLFYCPETHSLAERVAAQSDAIELRSINWRKF------------KDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQ 155 (398)
Q Consensus 88 ~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~F------------pDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmEL 155 (398)
+.+=.....-.+|..+|..| ++++..+..... .+|+..+.+......+|++|+||-.+.....-|
T Consensus 49 ~ivgi~~~G~~~A~~la~~L-~~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDIitTG~Tl-- 125 (169)
T TIGR01090 49 YIVGPEARGFIFGAALAYKL-GVGFVPVRKPGKLPGETISASYDLEYGKDQLEIHKDAIKPGQRVLIVDDLLATGGTA-- 125 (169)
T ss_pred EEEeehhccHHHHHHHHHHH-CCCEEEEEeCCCCCCceeeeEEeeccCceEEEEehhhcCCcCEEEEEeccccchHHH--
Confidence 43333345668999999999 588754332222 233334555433346999999998776654332
Q ss_pred HHHHHHccccCccceEEee
Q 015926 156 LSVIYALPKLFVSSFTLVL 174 (398)
Q Consensus 156 ll~i~alr~~gA~~ItaVi 174 (398)
.-+++.++++||+.+.++.
T Consensus 126 ~~a~~~L~~~Ga~~v~~~~ 144 (169)
T TIGR01090 126 EATDELIRKLGGEVVEAAF 144 (169)
T ss_pred HHHHHHHHHcCCEEEEEEE
Confidence 3446778889987665443
No 108
>PRK09123 amidophosphoribosyltransferase; Provisional
Probab=77.63 E-value=21 Score=38.15 Aligned_cols=86 Identities=14% Similarity=0.064 Sum_probs=55.8
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCceee-eEEEeeCC----------CceeEEec--C-CCCCCCceEEEEEecCCChh
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIELRS-INWRKFKD----------GFPNLFIP--N-AHGIRGQHVAFLASFSSPGK 151 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~-~~~~~FpD----------GE~~v~i~--~-~~~VrG~dV~ivqs~~~pd~ 151 (398)
-.+.+-.-.+...+|..+++.+ ++++.. ....+|-. .+..+++. . .+.+.|++|++|-....-..
T Consensus 296 ~D~Vv~VP~sg~~~A~~la~~l-gip~~~~lir~~y~grt~i~~~q~~r~~~v~~k~~~~~~~~~gk~vvlvDD~i~tG~ 374 (479)
T PRK09123 296 ADVVVPVPDSGVPAAIGYAQES-GIPFELGIIRNHYVGRTFIQPTQQIRNLGVKLKHNANRAVIEGKRVVLVDDSIVRGT 374 (479)
T ss_pred CeEEEEcCccHHHHHHHHHHhc-CCCeeheEEEEeecCccccccccccccccEEEEecccccccCCCEEEEEeceeCchH
Confidence 3466656666778999999999 688863 22223420 11123332 1 23488999999976654433
Q ss_pred HHHHHHHHHHccccCccceEEee
Q 015926 152 IFEQLSVIYALPKLFVSSFTLVL 174 (398)
Q Consensus 152 lmELll~i~alr~~gA~~ItaVi 174 (398)
.+ .-+++.|+++||++|.+.+
T Consensus 375 Tl--~~~~~~l~~~Ga~~v~~~~ 395 (479)
T PRK09123 375 TS--RKIVQMLRDAGAKEVHLRI 395 (479)
T ss_pred HH--HHHHHHHHHcCCCEEEEEE
Confidence 32 3468889999999999988
No 109
>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional
Probab=76.32 E-value=16 Score=34.07 Aligned_cols=84 Identities=18% Similarity=0.167 Sum_probs=55.1
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCcee-EE--ec-CCCCCCCceEEEEEecCCCh-hHHHHHHHHHH
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPN-LF--IP-NAHGIRGQHVAFLASFSSPG-KIFEQLSVIYA 161 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~-v~--i~-~~~~VrG~dV~ivqs~~~pd-~lmELll~i~a 161 (398)
++.+=...+.-.+|..+|..| +.++....-+++..|+.. +. +. ....++|++|+||-.+..-. .+.+ +++.
T Consensus 87 D~Ivgi~~gG~~~A~~lA~~L-~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~gk~VlIVDDVitTG~Tl~~---ai~~ 162 (200)
T PRK02277 87 DVVVGIAKSGVPLATLVADEL-GKDLAIYHPKKWDHGEGEKKTGSFSRNFASVEGKRCVIVDDVITSGTTMKE---TIEY 162 (200)
T ss_pred CEEEeeccCCHHHHHHHHHHh-CCCcEEEecccccccccccccceeccccccCCcCEEEEEeeccCchHHHHH---HHHH
Confidence 455555567889999999999 588876655555333211 11 11 11458999999998776553 3334 3567
Q ss_pred ccccCccceEEee
Q 015926 162 LPKLFVSSFTLVL 174 (398)
Q Consensus 162 lr~~gA~~ItaVi 174 (398)
++++|++.+.++.
T Consensus 163 l~~~Ga~~v~v~v 175 (200)
T PRK02277 163 LKEHGGKPVAVVV 175 (200)
T ss_pred HHHcCCEEEEEEE
Confidence 8889998876554
No 110
>PF15610 PRTase_3: PRTase ComF-like
Probab=76.30 E-value=3.2 Score=40.98 Aligned_cols=40 Identities=23% Similarity=0.378 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEE
Q 015926 297 GDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYV 336 (398)
Q Consensus 297 g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~ 336 (398)
..++||.||.+|||--||++=..+.+.+++.|++....+.
T Consensus 134 ~~l~gk~lIflDDIkITGshE~~V~~~~~~~~~~~~~~yl 173 (274)
T PF15610_consen 134 EFLSGKHLIFLDDIKITGSHEDKVRKILKEYGLENDFIYL 173 (274)
T ss_pred HHhCCcEEEEeccEEecCcHHHHHHHHHHHcCccccEEEE
Confidence 3479999999999999999999999999999998755543
No 111
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=75.94 E-value=29 Score=32.60 Aligned_cols=86 Identities=10% Similarity=0.066 Sum_probs=59.0
Q ss_pred EEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCC-Cce-eEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHcccc
Q 015926 88 VCLFYCPETHSLAERVAAQSDAIELRSINWRKFKD-GFP-NLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKL 165 (398)
Q Consensus 88 ~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpD-GE~-~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~ 165 (398)
+.+=-..++..+++.+.+.+..++++.+...+... ++. ..+.+..+++.|++|+++-.+-.-..- +..+++.+++.
T Consensus 71 ~~V~ILrgg~~~~~~l~~~l~~~~v~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~T--l~~ai~~L~~~ 148 (207)
T TIGR01091 71 VLVPILRAGLGMVDGVLKLIPEAKVGHVGAYRNEETLKPVPYYSKLPEDIDERTVIVLDPMLATGGT--MIAALDLLKKR 148 (207)
T ss_pred EEEEEeCCcHHHHHHHHHhCCcCceeEEEEEeCCCCCCCEEEEecCCCCCCCCEEEEECCCccchHH--HHHHHHHHHHc
Confidence 33334567889999999998656777766655322 222 234455678999999998877654322 34567888889
Q ss_pred CccceEEeec
Q 015926 166 FVSSFTLVLP 175 (398)
Q Consensus 166 gA~~ItaViP 175 (398)
|+++|.++..
T Consensus 149 G~~~I~v~~l 158 (207)
T TIGR01091 149 GAKKIKVLSI 158 (207)
T ss_pred CCCEEEEEEE
Confidence 9999888776
No 112
>PRK07272 amidophosphoribosyltransferase; Provisional
Probab=75.78 E-value=18 Score=38.73 Aligned_cols=124 Identities=14% Similarity=0.139 Sum_probs=74.5
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEE------Eee--CCC---ceeEEec---CCCCCCCceEEEEEecCCChhH
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINW------RKF--KDG---FPNLFIP---NAHGIRGQHVAFLASFSSPGKI 152 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~------~~F--pDG---E~~v~i~---~~~~VrG~dV~ivqs~~~pd~l 152 (398)
++.+-.-+++..+|..+|+.+ |+|+..--+ ++| |.. +..++.. ....++|++|+||-..-.-...
T Consensus 287 D~VvpVPnqa~~lA~~la~~l-gip~~~~lvk~~~~~rt~~~~~q~~R~~~vr~~f~~~~~~~~gk~vllVDDvittG~T 365 (484)
T PRK07272 287 DIVIGVPNSSLSAASGYAEES-GLPYEMGLVKNQYVARTFIQPTQELREQGVRMKLSAVSGVVKGKRVVMVDDSIVRGTT 365 (484)
T ss_pred CEEEEecHHHHHHHHHHHHHH-CCCcccCeEEEccCCccccCCCHHHHHHHHhhCccccccccCCCEEEEEccccCchHH
Confidence 566666677889999999999 688743211 234 221 1122221 2356889999998655433333
Q ss_pred HHHHHHHHHccccCccceEEeec--------cCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCc
Q 015926 153 FEQLSVIYALPKLFVSSFTLVLP--------FFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHA 221 (398)
Q Consensus 153 mELll~i~alr~~gA~~ItaViP--------Y~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs 221 (398)
+ --++++|+++||+.|.+++- |++.-++.+..--..-.+...+++.+ |+|.+..+.+..
T Consensus 366 ~--~~~~~~L~~~Ga~~v~~~~~~p~~~~~c~ygid~~~~~~lia~~~~~~ei~~~~--------~~dsl~~~~~~~ 432 (484)
T PRK07272 366 S--RRIVQLLKEAGAKEVHVAIASPELKYPCFYGIDIQTRRELISANHSVEEICDII--------GADSLTYLSVDG 432 (484)
T ss_pred H--HHHHHHHHhcCCcEEEEEEeCCccccChhhhccCcCHHHHHhcCCCHHHHHHHh--------CCCEEEEecHHH
Confidence 3 24578899999999998887 66666655432100111233444444 678887777654
No 113
>PRK13811 orotate phosphoribosyltransferase; Provisional
Probab=73.61 E-value=28 Score=31.72 Aligned_cols=83 Identities=18% Similarity=0.121 Sum_probs=54.7
Q ss_pred EEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHccccCc
Q 015926 88 VCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFV 167 (398)
Q Consensus 88 ~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~gA 167 (398)
+.+=.....-.+|..+|..+ |.+...+.-.+...|+....+ ..++|+.|+||-..-..-.- +.-.++.++++||
T Consensus 59 ~Vvg~~~gGi~~A~~~a~~l-~~p~~~~rK~~k~~g~~~~~~---g~~~g~~VlIVDDvi~TG~T--~~~~~~~l~~~Ga 132 (170)
T PRK13811 59 VVAGVAVGGVPLAVAVSLAA-GKPYAIIRKEAKDHGKAGLII---GDVKGKRVLLVEDVTTSGGS--ALYGIEQLRAAGA 132 (170)
T ss_pred EEEecCcCcHHHHHHHHHHH-CCCEEEEecCCCCCCCcceEE---cccCCCEEEEEEecccccHH--HHHHHHHHHHCCC
Confidence 34333445779999999999 688876665556677655544 35899999999877654321 2344677888887
Q ss_pred cceEEeeccC
Q 015926 168 SSFTLVLPFF 177 (398)
Q Consensus 168 ~~ItaViPY~ 177 (398)
+ +..++-..
T Consensus 133 ~-v~~~~~~v 141 (170)
T PRK13811 133 V-VDDVVTVV 141 (170)
T ss_pred e-EEEEEEEE
Confidence 3 44444333
No 114
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=72.79 E-value=40 Score=27.91 Aligned_cols=84 Identities=18% Similarity=0.144 Sum_probs=53.4
Q ss_pred EEEeCCCCHHHHHHHHHHhCCCceeeeEEE----------eeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHH
Q 015926 89 CLFYCPETHSLAERVAAQSDAIELRSINWR----------KFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSV 158 (398)
Q Consensus 89 ~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~----------~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~ 158 (398)
.+=-..+.-.+|..++..+ +.+....... .-..+...........+.|++|+||-.+.+...-| .-+
T Consensus 31 ivgi~~~G~~~a~~la~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~vliVDDvi~tG~Tl--~~~ 107 (125)
T PF00156_consen 31 IVGIPRGGIPLAAALARAL-GIPLVFVRKRKSYYPGSDKTSREKNNQELFIIDKEDIKGKRVLIVDDVIDTGGTL--KEA 107 (125)
T ss_dssp EEEETTTTHHHHHHHHHHH-THEEEEEEEEEEEESEEEEEEEETEEEEEEEEESSSGTTSEEEEEEEEESSSHHH--HHH
T ss_pred EEeehhccHHHHHHHHHHh-CCCccceeeeecccccchhhhhccCceEEeecccccccceeEEEEeeeEcccHHH--HHH
Confidence 3333456789999999999 5766543322 12222222233346789999999998776653322 334
Q ss_pred HHHccccCccceEEeec
Q 015926 159 IYALPKLFVSSFTLVLP 175 (398)
Q Consensus 159 i~alr~~gA~~ItaViP 175 (398)
++.+++.|++.+.++..
T Consensus 108 ~~~L~~~g~~~v~~~vl 124 (125)
T PF00156_consen 108 IELLKEAGAKVVGVAVL 124 (125)
T ss_dssp HHHHHHTTBSEEEEEEE
T ss_pred HHHHHhCCCcEEEEEEE
Confidence 67788999998877653
No 115
>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A ....
Probab=72.50 E-value=13 Score=34.74 Aligned_cols=94 Identities=13% Similarity=0.096 Sum_probs=56.3
Q ss_pred CCCCCceEEEEEecCCChhHHHHHHHHHHccccCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCC
Q 015926 133 HGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPT 212 (398)
Q Consensus 133 ~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D 212 (398)
.+|.|++++||-.+.+-.. -+.-.++.||+.||++|.++.-+-=.+ |. .. +.|++ ..+|
T Consensus 79 GDV~gk~~IIvDDiIdtg~--Tl~~aA~~Lk~~GA~~V~~~aTHgvfs--------~~-----A~-~~l~~-----s~Id 137 (184)
T PF14572_consen 79 GDVKGKICIIVDDIIDTGG--TLIKAAELLKERGAKKVYACATHGVFS--------GD-----AP-ERLEE-----SPID 137 (184)
T ss_dssp S--TTSEEEEEEEEESSTH--HHHHHHHHHHHTTESEEEEEEEEE-----------TT-----HH-HHHHH-----SSES
T ss_pred EEccCCeEeeecccccchH--HHHHHHHHHHHcCCCEEEEEEeCcccC--------ch-----HH-HHHhh-----cCCe
Confidence 6899999999998865432 135567889999999999988664443 22 12 34553 2578
Q ss_pred EEEEEcCCch--hhhcccCCCCcccccchHHHHHHHHHhCC
Q 015926 213 SLVTFDIHAL--QERFYFGDTILPCFESAIPLLLNRLQQLP 251 (398)
Q Consensus 213 ~IItVDLHs~--q~~gfFn~~l~~~~~~a~~lLa~~L~~~~ 251 (398)
.||+-|-... +.... +.+. .++.+++||+.|.+..
T Consensus 138 ~vvvTnTIp~~~~~~~~--~Ki~--vldis~llaeaI~rih 174 (184)
T PF14572_consen 138 EVVVTNTIPQEEQKLQC--PKIK--VLDISPLLAEAIRRIH 174 (184)
T ss_dssp EEEEETTS--HHHHHH---TTEE--EE--HHHHHHHHHHHH
T ss_pred EEEEeccccCchhhhcC--CCEe--EeehHHHHHHHHHHHH
Confidence 9999986533 22211 2222 2356889999887743
No 116
>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional
Probab=72.07 E-value=42 Score=32.64 Aligned_cols=89 Identities=9% Similarity=0.132 Sum_probs=58.3
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCC----------Cce---eeeEEEeeCC----CceeEEecCCCCCCCceEEEEEecCC
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDA----------IEL---RSINWRKFKD----GFPNLFIPNAHGIRGQHVAFLASFSS 148 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~----------~~l---~~~~~~~FpD----GE~~v~i~~~~~VrG~dV~ivqs~~~ 148 (398)
..+.|=-...+-.+|..+.+.|.. ++. ..+.++.|-| ||..+.-....++.|++|+||-.+..
T Consensus 82 ~~vilgILkGg~~FaadL~~~L~~~~~~~~~~~~~~~~~~dfi~vsSY~~~~s~g~v~i~~~~~~~l~gk~VLIVDDIid 161 (241)
T PTZ00149 82 ELHILCILKGSRGFFSALVDYLNRIHNYSSTESPKPPYQEHYVRVKSYCNDESTGKLEIVSDDLSCLKDKHVLIVEDIID 161 (241)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhhhhhccccccCcccccccEEEEEEccCCCcCCceEEecccccccCCCEEEEEEeEeC
Confidence 345554566677788888877731 123 6677777755 45444434455799999999988876
Q ss_pred ChhHHHHHHHHHHccccCccceEEeecc
Q 015926 149 PGKIFEQLSVIYALPKLFVSSFTLVLPF 176 (398)
Q Consensus 149 pd~lmELll~i~alr~~gA~~ItaViPY 176 (398)
-...| ..+++.|++.|+++|.++.-.
T Consensus 162 TG~Tl--~~~~~~L~~~g~~~V~va~L~ 187 (241)
T PTZ00149 162 TGNTL--VKFCEYLKKFEPKTIRIATLF 187 (241)
T ss_pred hHHHH--HHHHHHHHhcCCCEEEEEEEE
Confidence 54433 223466788899998666543
No 117
>TIGR01134 purF amidophosphoribosyltransferase. Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.
Probab=70.61 E-value=36 Score=35.82 Aligned_cols=122 Identities=16% Similarity=0.154 Sum_probs=71.6
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEE------ee--CCCc-e--eEEec---CCCCCCCceEEEEEecCCChh
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIELRSINWR------KF--KDGF-P--NLFIP---NAHGIRGQHVAFLASFSSPGK 151 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~------~F--pDGE-~--~v~i~---~~~~VrG~dV~ivqs~~~pd~ 151 (398)
-++.+-.-.+....|..+|+.+ |+++...-++ +| |+.+ . .++.. ....++||.|+||.....-..
T Consensus 274 ~D~Vv~VP~sg~~~A~~la~~l-gip~~~~l~r~~~~~r~~i~~~q~~R~~~v~~k~~~~~~~~~gk~v~lvDD~ittG~ 352 (442)
T TIGR01134 274 ADVVIPVPDSGRSAALGFAQAS-GIPYREGLIKNRYVGRTFIMPTQELRELSVRLKLNPIREVFRGKRVVLVDDSIVRGT 352 (442)
T ss_pred CEEEEEccCCHHHHHHHHHHHh-CCCchHHeEEeccccccccCCCHHHHHHHHhhhcccccccCCCCEEEEEeccccccH
Confidence 4556655566778999999999 5887642222 22 2221 0 01111 134678999999876544333
Q ss_pred HHHHHHHHHHccccCccceEEeec--------cCCC---CCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCC
Q 015926 152 IFEQLSVIYALPKLFVSSFTLVLP--------FFPT---GTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVTFDIH 220 (398)
Q Consensus 152 lmELll~i~alr~~gA~~ItaViP--------Y~~Y---sRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLH 220 (398)
-+ --++.+|+++||+.|.+++. |++- .|++..... .+...+++.+ |+|.+..+.+.
T Consensus 353 T~--~~~~~~l~~~ga~~v~~~~~spp~~~pc~yg~d~~~~~el~~~~---~~~~~i~~~~--------~~~~l~~~~~~ 419 (442)
T TIGR01134 353 TS--RQIVKMLRDAGAKEVHVRIASPPIRYPCYYGIDMPTREELIANG---RTVEEIAKEI--------GADSLAYLSLE 419 (442)
T ss_pred HH--HHHHHHHHHcCCcEEEEEEccCCccCCcccccCCCCHHHHhhcC---CCHHHHHHHh--------CCCEEEEecHH
Confidence 23 33578899999999998887 5555 454433221 1233344433 57777766655
Q ss_pred c
Q 015926 221 A 221 (398)
Q Consensus 221 s 221 (398)
.
T Consensus 420 ~ 420 (442)
T TIGR01134 420 G 420 (442)
T ss_pred H
Confidence 4
No 118
>PRK05793 amidophosphoribosyltransferase; Provisional
Probab=69.80 E-value=26 Score=37.19 Aligned_cols=91 Identities=13% Similarity=0.039 Sum_probs=56.9
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeee-EEEee-------CCC---ce--eEEe-cCCCCCCCceEEEEEecCCChhH
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSI-NWRKF-------KDG---FP--NLFI-PNAHGIRGQHVAFLASFSSPGKI 152 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~-~~~~F-------pDG---E~--~v~i-~~~~~VrG~dV~ivqs~~~pd~l 152 (398)
++.+-.-.+...+|..+|+.+ |+++... ...++ |+. +. .++. .....++|++|++|-..-.-...
T Consensus 290 D~Vv~vPdsg~~~A~~~A~~l-gip~~~~l~r~~~~~rtfi~~~q~~R~~~~~~k~~~~~~~v~gk~VlLVDD~ItTGtT 368 (469)
T PRK05793 290 DIVIGVPDSGIPAAIGYAEAS-GIPYGIGFIKNKYVGRTFIAPSQELRERAVRVKLNPLKVNVEGKRVVLIDDSIVRGTT 368 (469)
T ss_pred CEEEEcCccHHHHHHHHHHHh-CCCEeeeEEEeeeccccccChhHhhhhhhheEecccCccccCCCEEEEEccccCchHH
Confidence 455555556678999999999 6998642 22222 111 11 1222 12356899999999765443333
Q ss_pred HHHHHHHHHccccCccceEEeeccCCCC
Q 015926 153 FEQLSVIYALPKLFVSSFTLVLPFFPTG 180 (398)
Q Consensus 153 mELll~i~alr~~gA~~ItaViPY~~Ys 180 (398)
| .-++.+||++||++|.+++-.=|..
T Consensus 369 l--~~~~~~Lr~aGAk~V~~~~~~p~~~ 394 (469)
T PRK05793 369 S--KRLVELLRKAGAKEVHFRVSSPPVK 394 (469)
T ss_pred H--HHHHHHHHHcCCCEEEEEEECCCcC
Confidence 3 2368899999999998877654443
No 119
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=69.65 E-value=54 Score=30.53 Aligned_cols=87 Identities=11% Similarity=0.133 Sum_probs=55.8
Q ss_pred EEEEeCCCCHHHHHHHHHHhC-CCceeeeEEEeeCCC-----ceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHH
Q 015926 88 VCLFYCPETHSLAERVAAQSD-AIELRSINWRKFKDG-----FPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYA 161 (398)
Q Consensus 88 ~~lfsg~s~~~LA~~Ia~~l~-~~~l~~~~~~~FpDG-----E~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~a 161 (398)
+.|=-...+-.++..+++.++ ..++..+.+..|-+| +..+.-...++++|+||+||-.+-.....| -.+.+-
T Consensus 38 ~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~kDld~di~grdVLiVeDIiDsG~TL--s~i~~~ 115 (178)
T COG0634 38 LVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILKDLDEDIKGRDVLIVEDIIDSGLTL--SKVRDL 115 (178)
T ss_pred EEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEecccccCCCCCeEEEEecccccChhH--HHHHHH
Confidence 333334556667777777763 134567888888654 555555567899999999998776543222 233455
Q ss_pred ccccCccceEEeecc
Q 015926 162 LPKLFVSSFTLVLPF 176 (398)
Q Consensus 162 lr~~gA~~ItaViPY 176 (398)
|+..||+++..+.--
T Consensus 116 l~~r~a~sv~i~tLl 130 (178)
T COG0634 116 LKERGAKSVRIATLL 130 (178)
T ss_pred HHhCCCCeEEEEEEe
Confidence 667888888776543
No 120
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=68.85 E-value=48 Score=30.11 Aligned_cols=89 Identities=16% Similarity=0.182 Sum_probs=55.8
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhC---C--CceeeeEEEeeCCCc-----e-eEE-ecCCCCCCCceEEEEEecCCChhHH
Q 015926 86 KKVCLFYCPETHSLAERVAAQSD---A--IELRSINWRKFKDGF-----P-NLF-IPNAHGIRGQHVAFLASFSSPGKIF 153 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~---~--~~l~~~~~~~FpDGE-----~-~v~-i~~~~~VrG~dV~ivqs~~~pd~lm 153 (398)
..+.+--....-.+|..+++.|+ + +++..+....|-|+. . .++ .....++.|++|+||-.+..-..-|
T Consensus 32 ~~viv~il~gG~~~a~~La~~L~~~~~~~~~~~~l~~~~y~~~~~~~~~~~~~~~~~l~~~v~gr~VLIVDDIidTG~Tl 111 (176)
T PRK05205 32 NLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDLTKKGLHPQVKPTDIPFDIEGKRVILVDDVLYTGRTI 111 (176)
T ss_pred CeEEEEEccCCHHHHHHHHHHHHHHcCCCCccceEEEEEeecCccccCcccccccccCCCCCCCCEEEEEecccCcHHHH
Confidence 34555556667889999999883 2 235666666776642 1 111 1233479999999998876654333
Q ss_pred HHHHHHHHccccC-ccceEEeecc
Q 015926 154 EQLSVIYALPKLF-VSSFTLVLPF 176 (398)
Q Consensus 154 ELll~i~alr~~g-A~~ItaViPY 176 (398)
..+++.+++.| ++++.++.-+
T Consensus 112 --~~~~~~L~~~G~~~~v~~avL~ 133 (176)
T PRK05205 112 --RAALDALFDYGRPARVQLAVLV 133 (176)
T ss_pred --HHHHHHHHhcCCCcEEEEEEEE
Confidence 33457777887 6777555444
No 121
>PLN02293 adenine phosphoribosyltransferase
Probab=67.56 E-value=57 Score=30.28 Aligned_cols=83 Identities=10% Similarity=0.025 Sum_probs=51.3
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeC------------CCceeEEecCCCCC-CCceEEEEEecCCChhHH
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINWRKFK------------DGFPNLFIPNAHGI-RGQHVAFLASFSSPGKIF 153 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~Fp------------DGE~~v~i~~~~~V-rG~dV~ivqs~~~pd~lm 153 (398)
++.+=.....-.||..+|..| |.++.-+.-.+.. .|+..+.+.. ..+ +|+.|+||-.+-.-..-+
T Consensus 64 d~Ivg~e~~Gi~lA~~lA~~L-g~p~v~~rK~~k~~~~~~~~~~~~~~g~~~l~l~~-~~i~~G~rVlIVDDvitTG~T~ 141 (187)
T PLN02293 64 SVVAGIEARGFIFGPPIALAI-GAKFVPLRKPGKLPGEVISEEYVLEYGTDCLEMHV-GAVEPGERALVIDDLIATGGTL 141 (187)
T ss_pred CEEEEeCCCchHHHHHHHHHH-CCCEEEEEecCCCCCceEEEEEeccCCceEEEEEc-CccCCCCEEEEEeccccchHHH
Confidence 444444455778999999999 5887654443332 2333334432 244 799999998776553322
Q ss_pred HHHHHHHHccccCccceEEe
Q 015926 154 EQLSVIYALPKLFVSSFTLV 173 (398)
Q Consensus 154 ELll~i~alr~~gA~~ItaV 173 (398)
.-+++.++++|++.+.++
T Consensus 142 --~~~~~~l~~~Ga~~v~~~ 159 (187)
T PLN02293 142 --CAAINLLERAGAEVVECA 159 (187)
T ss_pred --HHHHHHHHHCCCEEEEEE
Confidence 334678888898765443
No 122
>PRK08341 amidophosphoribosyltransferase; Provisional
Probab=66.43 E-value=28 Score=36.83 Aligned_cols=87 Identities=11% Similarity=0.083 Sum_probs=55.6
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCceee-eEEEee-------CC-CceeEEec---CCCCCCCceEEEEEecCCChhHH
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIELRS-INWRKF-------KD-GFPNLFIP---NAHGIRGQHVAFLASFSSPGKIF 153 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~-~~~~~F-------pD-GE~~v~i~---~~~~VrG~dV~ivqs~~~pd~lm 153 (398)
.++.+-.-.+...+|..+|+.+ |+++.. ....++ |. -+..++.+ ....++||+|+||-..-.-...+
T Consensus 272 ~D~Vv~VPdsg~~~A~~~a~~l-gip~~~~l~k~r~~~rtfi~~~qr~~~~~~k~~~~~~~v~gk~VlLVDD~IttGtTl 350 (442)
T PRK08341 272 GDVVIAVPDSGRTAALGFAHES-GIPYMEGLIKNRYIGRTFIMPSGRELKVKLKLSPVREVINGKRVVLVDDSIVRGTTM 350 (442)
T ss_pred CceEEEecCchHHHHHHHHHHh-CCCchheEEEeccccccccCcCchhhhheeeecccccccCCCEEEEEeeeeccHHHH
Confidence 4566655566668999999999 688865 333222 11 12222222 24568999999996554333333
Q ss_pred HHHHHHHHccccCccceEEeec
Q 015926 154 EQLSVIYALPKLFVSSFTLVLP 175 (398)
Q Consensus 154 ELll~i~alr~~gA~~ItaViP 175 (398)
--++++|+++||++|.+.+.
T Consensus 351 --~~~~~~L~~aGAk~V~~~~~ 370 (442)
T PRK08341 351 --KRIVKMLRDAGAREVHVRIA 370 (442)
T ss_pred --HHHHHHHHhcCCcEEEEEEc
Confidence 23678999999999988773
No 123
>PRK08525 amidophosphoribosyltransferase; Provisional
Probab=65.30 E-value=32 Score=36.29 Aligned_cols=93 Identities=11% Similarity=0.036 Sum_probs=57.6
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEe-eC-----CCc-------eeEEecC-CCCCCCceEEEEEecCCChhH
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINWRK-FK-----DGF-------PNLFIPN-AHGIRGQHVAFLASFSSPGKI 152 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~-Fp-----DGE-------~~v~i~~-~~~VrG~dV~ivqs~~~pd~l 152 (398)
++.+-.-.+...+|..+|+.| |+|+...-+++ +. +.+ ....+.. .+.+.||+|+||-....-...
T Consensus 277 d~Vv~vPd~g~~~A~~~A~~l-gip~~~~l~rk~~~~r~~i~~~qr~rn~~~~~~~~~~~~~v~gK~VlLVDDvitTG~T 355 (445)
T PRK08525 277 DFVVPVPDSGVPAAIGYAQES-GIPFEMAIVRNHYVGRTFIEPTQEMRNLKVKLKLNPMSKVLEGKRIVVIDDSIVRGTT 355 (445)
T ss_pred CeEEECCchHHHHHHHHHHHh-CCCccceEEEeeccccccCCHHHHHHhhheeEEecccccccCCCeEEEEecccCcHHH
Confidence 444444445678999999999 58774322222 21 111 1222222 345899999999766544333
Q ss_pred HHHHHHHHHccccCccceEEeeccCCCCCc
Q 015926 153 FEQLSVIYALPKLFVSSFTLVLPFFPTGTS 182 (398)
Q Consensus 153 mELll~i~alr~~gA~~ItaViPY~~YsRQ 182 (398)
| .-++++||++||++|.+++-.=+.+..
T Consensus 356 l--~~a~~~Lr~aGA~~V~v~~~hp~~~~~ 383 (445)
T PRK08525 356 S--KKIVSLLRAAGAKEIHLRIACPEIKFP 383 (445)
T ss_pred H--HHHHHHHHhcCCCEEEEEEECCCcCCc
Confidence 3 236788999999999988766555443
No 124
>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family. This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species.
Probab=63.18 E-value=85 Score=29.03 Aligned_cols=81 Identities=15% Similarity=-0.036 Sum_probs=51.5
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHcccc
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKL 165 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~ 165 (398)
.++.+=...+.-.+|..+|..| +++.... ++.. |+..+.-.. .-.+|++|+||-.+.....-| ..+++.+++.
T Consensus 59 ~d~Ivgi~~gGi~~A~~la~~L-~~~~i~~--~k~~-~~~~~~~~~-~l~~G~~VLIVDDIi~TG~Tl--~~a~~~l~~~ 131 (187)
T TIGR01367 59 VDFIVGPAMGGVILGYEVARQL-SVRSIFA--EREG-GGMKLRRGF-AVKPGEKFVAVEDVVTTGGSL--LEAIRAIEGQ 131 (187)
T ss_pred CCEEEEEccCcHHHHHHHHHHh-CCCeEEE--EEeC-CcEEEeecc-cCCCCCEEEEEEeeecchHHH--HHHHHHHHHc
Confidence 3455545567889999999999 5776433 3433 543332221 225899999998887654332 3335667889
Q ss_pred CccceEEe
Q 015926 166 FVSSFTLV 173 (398)
Q Consensus 166 gA~~ItaV 173 (398)
||+.+.++
T Consensus 132 Ga~vv~~~ 139 (187)
T TIGR01367 132 GGQVVGLA 139 (187)
T ss_pred CCeEEEEE
Confidence 99876443
No 125
>PRK00455 pyrE orotate phosphoribosyltransferase; Validated
Probab=62.93 E-value=59 Score=30.20 Aligned_cols=81 Identities=15% Similarity=0.062 Sum_probs=50.3
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHccccC
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLF 166 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~g 166 (398)
++.+=.....-.+|..+|..| ++++.-..-.....|+.. .+.. ..++|++|+||..+-....-+ .-+++.+++.|
T Consensus 66 d~Ivgi~~gG~~~A~~la~~L-~~~~~~~rk~~~~~g~~~-~~~~-~~~~g~~VliVDDvi~tG~Tl--~~~~~~l~~~G 140 (202)
T PRK00455 66 DVVAGPATGGIPLAAAVARAL-DLPAIFVRKEAKDHGEGG-QIEG-RRLFGKRVLVVEDVITTGGSV--LEAVEAIRAAG 140 (202)
T ss_pred CEEEecccCcHHHHHHHHHHh-CCCEEEEecccCCCCCCc-eEEc-cCCCCCEEEEEecccCCcHHH--HHHHHHHHHcC
Confidence 344444567889999999999 588765433333334321 2221 346899999998776553222 33367778888
Q ss_pred ccceEE
Q 015926 167 VSSFTL 172 (398)
Q Consensus 167 A~~Ita 172 (398)
|+.+.+
T Consensus 141 a~~v~~ 146 (202)
T PRK00455 141 AEVVGV 146 (202)
T ss_pred CEEEEE
Confidence 876544
No 126
>PRK13812 orotate phosphoribosyltransferase; Provisional
Probab=62.61 E-value=57 Score=29.94 Aligned_cols=77 Identities=12% Similarity=0.057 Sum_probs=51.1
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCC-CCceEEEEEecCCCh-hHHHHHHHHHHccc
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGI-RGQHVAFLASFSSPG-KIFEQLSVIYALPK 164 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~V-rG~dV~ivqs~~~pd-~lmELll~i~alr~ 164 (398)
.+.+=.....-.+|..+|..| |+++.-....+-..|+..... ..+ +|++|+||-.+-.-. .+. -+++++++
T Consensus 60 d~ivg~~~ggi~lA~~lA~~l-~~p~~~~rk~~k~yg~~~~~~---g~~~~g~~VlIVDDvitTG~Tl~---~~~~~l~~ 132 (176)
T PRK13812 60 TKLAGVALGAVPLVAVTSVET-GVPYVIARKQAKEYGTGNRIE---GRLDEGEEVVVLEDIATTGQSAV---DAVEALRE 132 (176)
T ss_pred CEEEEeecchHHHHHHHHHHH-CCCEEEEeccCCcCCCCCeEE---ecCCCcCEEEEEEEeeCCCHHHH---HHHHHHHH
Confidence 444444455779999999999 688876666555556543322 234 899999998775542 333 34677788
Q ss_pred cCccce
Q 015926 165 LFVSSF 170 (398)
Q Consensus 165 ~gA~~I 170 (398)
+|++-+
T Consensus 133 ~Ga~vv 138 (176)
T PRK13812 133 AGATVN 138 (176)
T ss_pred CCCeEE
Confidence 887544
No 127
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=54.35 E-value=27 Score=30.20 Aligned_cols=37 Identities=30% Similarity=0.512 Sum_probs=32.9
Q ss_pred eCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEE
Q 015926 296 EGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYV 336 (398)
Q Consensus 296 ~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~ 336 (398)
.++++|++++|+ -.|++-..++..|.+.|+++|+++-
T Consensus 7 ~~~l~~~~vlvi----GaGg~ar~v~~~L~~~g~~~i~i~n 43 (135)
T PF01488_consen 7 FGDLKGKRVLVI----GAGGAARAVAAALAALGAKEITIVN 43 (135)
T ss_dssp HSTGTTSEEEEE----SSSHHHHHHHHHHHHTTSSEEEEEE
T ss_pred cCCcCCCEEEEE----CCHHHHHHHHHHHHHcCCCEEEEEE
Confidence 458899999987 4799999999999999999999874
No 128
>PRK09246 amidophosphoribosyltransferase; Provisional
Probab=51.26 E-value=69 Score=34.35 Aligned_cols=85 Identities=9% Similarity=0.046 Sum_probs=53.2
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEE-eeCCCce-----------eEEe--c-CCCCCCCceEEEEEecCCChh
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINWR-KFKDGFP-----------NLFI--P-NAHGIRGQHVAFLASFSSPGK 151 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~-~FpDGE~-----------~v~i--~-~~~~VrG~dV~ivqs~~~pd~ 151 (398)
.+.+-.-.+...+|..+|+.+ ++++..--++ ++. |-+ +++. . ....++||+|+||-....-..
T Consensus 295 D~VvpVP~s~~~~A~~la~~l-gip~~~~l~k~~~~-~rt~i~~~q~~R~~~vr~~f~~~~~~v~gK~VlLVDDvitTGa 372 (501)
T PRK09246 295 DVVIPIPDTSRDAALEIARIL-GVPYREGFVKNRYV-GRTFIMPGQAQRKKSVRQKLNAIRAEFKGKNVLLVDDSIVRGT 372 (501)
T ss_pred cEEEEeCccHHHHHHHHHHHH-CCCccceEEEEecc-cccccCcCHHHHHHHHHhhcCCccccccCCeEEEEeccccccH
Confidence 455555556678999999999 6887542222 221 111 1111 1 235689999999976544433
Q ss_pred HHHHHHHHHHccccCccceEEeec
Q 015926 152 IFEQLSVIYALPKLFVSSFTLVLP 175 (398)
Q Consensus 152 lmELll~i~alr~~gA~~ItaViP 175 (398)
.+ --++.+|+++||++|.+++-
T Consensus 373 Tl--~~~~~~L~~aGA~~V~v~v~ 394 (501)
T PRK09246 373 TS--EQIVQMAREAGAKKVYFASA 394 (501)
T ss_pred HH--HHHHHHHHHcCCCEEEEEEE
Confidence 33 22578999999999977654
No 129
>TIGR00336 pyrE orotate phosphoribosyltransferase. The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme.
Probab=48.25 E-value=1.1e+02 Score=27.77 Aligned_cols=72 Identities=13% Similarity=0.027 Sum_probs=44.0
Q ss_pred CCCCHHHHHHHHHHhCCCc-----eeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHccccCc
Q 015926 93 CPETHSLAERVAAQSDAIE-----LRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFV 167 (398)
Q Consensus 93 g~s~~~LA~~Ia~~l~~~~-----l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~gA 167 (398)
....-.+|..||..| +.+ +.-..-.....|+..... .+-.+|+.|+||-.+.....-| .-+++.++++|+
T Consensus 62 ~~gG~~~A~~la~~l-~~~~~~~~~~~~rk~~k~~g~~~~~~--g~~~~g~~VlIVDDvi~TG~Tl--~~a~~~l~~~Ga 136 (173)
T TIGR00336 62 ALGGIPIATAVSVKL-AKPGGDIPLCFNRKEAKDHGEGGNIE--GELLEGDKVVVVEDVITTGTSI--LEAVEIIQAAGG 136 (173)
T ss_pred ccChHHHHHHHHHHh-cCcCCCceEEEEcCCcccCCCCCcee--cCCCCCCEEEEEeccccChHHH--HHHHHHHHHcCC
Confidence 345679999999999 577 433222222335533222 2345899999998877653322 334677888886
Q ss_pred cc
Q 015926 168 SS 169 (398)
Q Consensus 168 ~~ 169 (398)
+-
T Consensus 137 ~v 138 (173)
T TIGR00336 137 QV 138 (173)
T ss_pred eE
Confidence 43
No 130
>PRK12560 adenine phosphoribosyltransferase; Provisional
Probab=47.64 E-value=1.5e+02 Score=27.44 Aligned_cols=83 Identities=16% Similarity=0.087 Sum_probs=49.6
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCC------------ceeEEecCCCCCCCceEEEEEecCCChhHHH
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDG------------FPNLFIPNAHGIRGQHVAFLASFSSPGKIFE 154 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDG------------E~~v~i~~~~~VrG~dV~ivqs~~~pd~lmE 154 (398)
++.+=.-...-.+|..+|..+ +.++......+++.. ..+-.+......+|++|+||-.+-....-|
T Consensus 53 D~Ivg~e~~Gi~lA~~vA~~l-~~p~~~~rk~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~G~rVlIVDDvitTG~T~- 130 (187)
T PRK12560 53 DKIVTEEDKGAPLATPVSLLS-GKPLAMARWYPYSLSELNYNVVEIGSEYFEGVVYLNGIEKGDRVAIIDDTLSTGGTV- 130 (187)
T ss_pred CEEEEEccccHHHHHHHHHhh-CCCEEEeccCCCcccceeEEeeeeeccceeeeeEccCCCCcCEEEEEEeccccCHHH-
Confidence 344434455779999999998 588765543332221 111012222346899999998776543222
Q ss_pred HHHHHHHccccCccceEE
Q 015926 155 QLSVIYALPKLFVSSFTL 172 (398)
Q Consensus 155 Lll~i~alr~~gA~~Ita 172 (398)
.-+++.++++||..+.+
T Consensus 131 -~~ai~ll~~aGa~vv~v 147 (187)
T PRK12560 131 -IALIKAIENSGGIVSDV 147 (187)
T ss_pred -HHHHHHHHHCCCEEEEE
Confidence 44567888899865433
No 131
>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.
Probab=46.69 E-value=39 Score=25.69 Aligned_cols=34 Identities=18% Similarity=0.283 Sum_probs=28.6
Q ss_pred CCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEE
Q 015926 299 PRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAY 335 (398)
Q Consensus 299 v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~ 335 (398)
-+++.|+++++- |.....++..|++.|-..|+.+
T Consensus 48 ~~~~~vv~~c~~---~~~a~~~~~~l~~~G~~~v~~l 81 (89)
T cd00158 48 DKDKPIVVYCRS---GNRSARAAKLLRKAGGTNVYNL 81 (89)
T ss_pred CCCCeEEEEeCC---CchHHHHHHHHHHhCcccEEEe
Confidence 468899998876 7788889999999998888765
No 132
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=46.56 E-value=38 Score=25.99 Aligned_cols=34 Identities=15% Similarity=0.223 Sum_probs=28.2
Q ss_pred CCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEE
Q 015926 299 PRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAY 335 (398)
Q Consensus 299 v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~ 335 (398)
-+++.+++++ .+|.....++..|++.|-..|+.+
T Consensus 54 ~~~~~iv~~c---~~g~~a~~~~~~l~~~G~~~v~~l 87 (100)
T smart00450 54 DKDKPVVVYC---RSGNRSAKAAWLLRELGFKNVYLL 87 (100)
T ss_pred CCCCeEEEEe---CCCcHHHHHHHHHHHcCCCceEEe
Confidence 4678899988 578888899999999999987654
No 133
>PRK07349 amidophosphoribosyltransferase; Provisional
Probab=44.81 E-value=1e+02 Score=33.27 Aligned_cols=87 Identities=10% Similarity=0.041 Sum_probs=53.7
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCc-----------ee--EEe-cCCCCCCCceEEEEEecCCChh
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGF-----------PN--LFI-PNAHGIRGQHVAFLASFSSPGK 151 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE-----------~~--v~i-~~~~~VrG~dV~ivqs~~~pd~ 151 (398)
-++.+=.-.+.-.+|..+|+.+ |+++...-++..--|. .. +++ .+.+.++||.|++|-....-..
T Consensus 313 ~DvVv~VP~sg~~~A~g~A~~l-gip~~~~L~r~~y~grtfi~p~q~~R~~~~~~kl~~~~~~~~gkrVlLVDDvIttGt 391 (500)
T PRK07349 313 ADLVIGVPDSGIPAAIGFSQAS-GIPYAEGLIKNRYVGRTFIQPTQSMRESGIRMKLNPLKDVLAGKRIIIVDDSIVRGT 391 (500)
T ss_pred CcEEEEeccccHHHHHHHHHHH-CCCchhceEEEeccCccccCCCHHHHHhhhheeeeccccccCCCEEEEEeceeCCcH
Confidence 3455545555678999999999 6988643333221211 01 111 1245678999999965433322
Q ss_pred HHHHHHHHHHccccCccceEEeec
Q 015926 152 IFEQLSVIYALPKLFVSSFTLVLP 175 (398)
Q Consensus 152 lmELll~i~alr~~gA~~ItaViP 175 (398)
.+ --++.+||++||+.|.+.+-
T Consensus 392 Tl--~~~~~~Lr~aGAkeV~~~i~ 413 (500)
T PRK07349 392 TS--RKIVKALRDAGATEVHMRIS 413 (500)
T ss_pred HH--HHHHHHHHHhCCeEEEEEeC
Confidence 22 33578899999999977654
No 134
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.
Probab=43.93 E-value=38 Score=26.64 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=28.3
Q ss_pred CCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEE
Q 015926 300 RGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAY 335 (398)
Q Consensus 300 ~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~ 335 (398)
+++.++++.+ +|.+...++..|++.|-..|+.+
T Consensus 55 ~~~~ivv~c~---~g~~s~~a~~~l~~~G~~~v~~l 87 (96)
T cd01444 55 RDRPVVVYCY---HGNSSAQLAQALREAGFTDVRSL 87 (96)
T ss_pred CCCCEEEEeC---CCChHHHHHHHHHHcCCceEEEc
Confidence 6788899877 88899999999999999888643
No 135
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=42.87 E-value=43 Score=26.64 Aligned_cols=33 Identities=18% Similarity=0.128 Sum_probs=26.7
Q ss_pred CCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEE
Q 015926 300 RGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAY 335 (398)
Q Consensus 300 ~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~ 335 (398)
++++++++++ +|.....++..|++.|-..|+.+
T Consensus 55 ~~~~ivv~c~---~g~~s~~~~~~l~~~G~~~v~~l 87 (96)
T cd01529 55 RATRYVLTCD---GSLLARFAAQELLALGGKPVALL 87 (96)
T ss_pred CCCCEEEEeC---ChHHHHHHHHHHHHcCCCCEEEe
Confidence 5778999875 77777888899999998887654
No 136
>PRK08105 flavodoxin; Provisional
Probab=42.31 E-value=80 Score=27.97 Aligned_cols=65 Identities=17% Similarity=0.080 Sum_probs=35.0
Q ss_pred CCcEEEEeCCC---CHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecC----CChhHHHHH
Q 015926 85 MKKVCLFYCPE---THSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFS----SPGKIFEQL 156 (398)
Q Consensus 85 ~~~~~lfsg~s---~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~----~pd~lmELl 156 (398)
|+++.||+||. ++.+|++|++.+. -.-..+.+..-.|-+ .+ +....+.|+++.|++ .|++..+.+
T Consensus 1 m~~i~I~YgS~tGnte~~A~~l~~~l~-~~g~~~~~~~~~~~~---~~---~~~~~~~vi~~~sT~G~Ge~p~~~~~f~ 72 (149)
T PRK08105 1 MAKVGIFVGTVYGNALLVAEEAEAILT-AQGHEVTLFEDPELS---DW---QPYQDELVLVVTSTTGQGDLPDSIVPLF 72 (149)
T ss_pred CCeEEEEEEcCchHHHHHHHHHHHHHH-hCCCceEEechhhCC---ch---hcccCCeEEEEECCCCCCCCChhHHHHH
Confidence 35688998887 5688888888762 111112222111211 01 112235688888886 356655554
No 137
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=41.58 E-value=1.7e+02 Score=27.59 Aligned_cols=71 Identities=14% Similarity=0.148 Sum_probs=51.5
Q ss_pred cCCCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCC-----CceeEEecCCCC-CCCceEEEEEecCCChhHH
Q 015926 83 RTMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKD-----GFPNLFIPNAHG-IRGQHVAFLASFSSPGKIF 153 (398)
Q Consensus 83 ~~~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpD-----GE~~v~i~~~~~-VrG~dV~ivqs~~~pd~lm 153 (398)
....+++|--+.+.--.|.-|+..|+-.++..+.+..+.+ ||.++.-...-+ ++|+.|+||-.+.+-..-|
T Consensus 27 ~~~PDvIiaiaRGG~~pariLsd~L~~~~l~~i~v~~y~~~~~~~~~~~v~~~~~~d~l~GkkVLIVDDI~DTG~Tl 103 (192)
T COG2236 27 GFKPDVIVAIARGGLIPARILSDFLGVKPLYSIKVEHYDETAERDGEAKVKYPITIDPLSGKKVLIVDDIVDTGETL 103 (192)
T ss_pred CCCCCEEEEEcCCceehHHHHHHHhCCCceEEEEEEEehhhcccCCcceeecCccccccCCCeEEEEecccCchHhH
Confidence 3456777777888888999999999423888888888866 344444444444 8999999999887664444
No 138
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=40.40 E-value=2.1e+02 Score=26.08 Aligned_cols=76 Identities=21% Similarity=0.205 Sum_probs=43.9
Q ss_pred CCCCCCEEEEEeccccchHhHHH-HHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCcccccc
Q 015926 297 GDPRGRHIVIVDDLVQSGGTLIE-CQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVK 375 (398)
Q Consensus 297 g~v~gk~viIVDDii~TG~Tl~~-aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdtip~~~~ 375 (398)
++++||+|+||= .|++.-. +++.|++.|+ +|+++- -- .++..+.+.+ .|=||++=.-|+...
T Consensus 40 ~~l~gk~vlViG----~G~~~G~~~a~~L~~~g~-~V~v~~--r~-~~~l~~~l~~---------aDiVIsat~~~~ii~ 102 (168)
T cd01080 40 IDLAGKKVVVVG----RSNIVGKPLAALLLNRNA-TVTVCH--SK-TKNLKEHTKQ---------ADIVIVAVGKPGLVK 102 (168)
T ss_pred CCCCCCEEEEEC----CcHHHHHHHHHHHhhCCC-EEEEEE--CC-chhHHHHHhh---------CCEEEEcCCCCceec
Confidence 578999999874 5666566 8899999998 455543 22 2344455555 355555444443111
Q ss_pred cccCCCCeEEEech
Q 015926 376 EVMSKPPFEVLSLA 389 (398)
Q Consensus 376 ~~~~~~k~~vlsva 389 (398)
...-.+..-++|++
T Consensus 103 ~~~~~~~~viIDla 116 (168)
T cd01080 103 GDMVKPGAVVIDVG 116 (168)
T ss_pred HHHccCCeEEEEcc
Confidence 00012235677765
No 139
>PRK07631 amidophosphoribosyltransferase; Provisional
Probab=40.34 E-value=1.2e+02 Score=32.51 Aligned_cols=88 Identities=11% Similarity=0.042 Sum_probs=54.5
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEE-e-----eCCC---ce--eEEec---CCCCCCCceEEEEEecCCChh
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIELRSINWR-K-----FKDG---FP--NLFIP---NAHGIRGQHVAFLASFSSPGK 151 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~-~-----FpDG---E~--~v~i~---~~~~VrG~dV~ivqs~~~pd~ 151 (398)
.++.+-.-.++..+|..+|+.+ |+++...-++ + |.-- +. +++.. ..+.++||.|++|-....-..
T Consensus 284 ~D~VvpVP~s~~~~A~gla~~~-gip~~~~lik~~~~~Rt~i~~~~~~R~~nv~~~f~~~~~~v~gk~VlLVDDsittGt 362 (475)
T PRK07631 284 ADVVTGVPDSSISAAIGYAEAT-GIPYELGLIKNRYVGRTFIQPSQALREQGVKMKLSPVRGVVEGKRVVMVDDSIVRGT 362 (475)
T ss_pred CcEEEEechhHHHHHHHHHHHH-CCCcccceEEEecCCCCCcCCCHHHHHHHHhhhhhhcccccCCceEEEEeeeeccHH
Confidence 3455555556678999999999 6888652222 2 2222 11 11111 135688999999865433333
Q ss_pred HHHHHHHHHHccccCccceEEeecc
Q 015926 152 IFEQLSVIYALPKLFVSSFTLVLPF 176 (398)
Q Consensus 152 lmELll~i~alr~~gA~~ItaViPY 176 (398)
.+. -++.+|+++||++|.+.+--
T Consensus 363 Tl~--~~~~~L~~aGA~eV~v~~~s 385 (475)
T PRK07631 363 TSR--RIVTMLREAGATEVHVRISS 385 (475)
T ss_pred HHH--HHHHHHHHcCCCEEEEEEeC
Confidence 332 45789999999999887753
No 140
>PRK06781 amidophosphoribosyltransferase; Provisional
Probab=39.79 E-value=1.1e+02 Score=32.76 Aligned_cols=88 Identities=10% Similarity=-0.000 Sum_probs=54.2
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhCCCceeee-EEEee-----C--CC---ceeEEe--c-CCCCCCCceEEEEEecCCChh
Q 015926 86 KKVCLFYCPETHSLAERVAAQSDAIELRSI-NWRKF-----K--DG---FPNLFI--P-NAHGIRGQHVAFLASFSSPGK 151 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~-~~~~F-----p--DG---E~~v~i--~-~~~~VrG~dV~ivqs~~~pd~ 151 (398)
-++.+-.-.+...+|..+|+.+ |+|+..- ..+++ . +. +.+++. . ..+.++||+|++|-....-..
T Consensus 284 ~D~vv~VP~s~~~~A~~~a~~~-gip~~~~lik~~~~~rt~~~~~~~~R~~~v~~~f~~~~~~i~gk~VlLVDDvittGt 362 (471)
T PRK06781 284 ADVVTGVPDSSISAAIGYAEAT-GIPYELGLIKNRYVGRTFIQPSQELREQGVKMKLSAVRGVVEGKRVVMIDDSIVRGT 362 (471)
T ss_pred CcEEEEcChhHHHHHHHHHHHh-CCCcccceEEEccCCCCCcCCCHHHHHHHHhcceeccccccCCceEEEEeceeccch
Confidence 3466655556678999999999 6888642 22223 1 11 111211 1 235688999999865433222
Q ss_pred HHHHHHHHHHccccCccceEEeecc
Q 015926 152 IFEQLSVIYALPKLFVSSFTLVLPF 176 (398)
Q Consensus 152 lmELll~i~alr~~gA~~ItaViPY 176 (398)
.+ --++.+||++||++|.+.+--
T Consensus 363 Tl--~~~~~~Lk~aGA~eV~v~i~s 385 (471)
T PRK06781 363 TS--KRIVRMLREAGATEVHVRIAS 385 (471)
T ss_pred HH--HHHHHHHHHcCCcEEEEEECC
Confidence 23 246788999999999887753
No 141
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=39.47 E-value=99 Score=25.63 Aligned_cols=79 Identities=9% Similarity=-0.067 Sum_probs=45.4
Q ss_pred EEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHccccCc
Q 015926 88 VCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFV 167 (398)
Q Consensus 88 ~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~gA 167 (398)
+.++....+...|...+..|. .++.....-++.+|..... ..+..+|++|+-|.+.. --|++-+++.+++.|+
T Consensus 2 I~i~G~G~S~~~a~~~~~~l~--~~~~~~~~~~~~~~~~~~~---~~~~~~d~~I~iS~sG~--t~e~~~~~~~a~~~g~ 74 (126)
T cd05008 2 ILIVGCGTSYHAALVAKYLLE--RLAGIPVEVEAASEFRYRR---PLLDEDTLVIAISQSGE--TADTLAALRLAKEKGA 74 (126)
T ss_pred EEEEEccHHHHHHHHHHHHHH--HhcCCceEEEehhHhhhcC---CCCCCCcEEEEEeCCcC--CHHHHHHHHHHHHcCC
Confidence 456666667777777777662 3332233333344322222 23566888888776543 2256677888888886
Q ss_pred cceEEee
Q 015926 168 SSFTLVL 174 (398)
Q Consensus 168 ~~ItaVi 174 (398)
+ +.++-
T Consensus 75 ~-vi~iT 80 (126)
T cd05008 75 K-TVAIT 80 (126)
T ss_pred e-EEEEE
Confidence 4 44444
No 142
>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism]
Probab=39.40 E-value=1e+02 Score=28.95 Aligned_cols=77 Identities=19% Similarity=0.116 Sum_probs=51.9
Q ss_pred CCCHHHHHHHHHHhCCCceeeeEEEeeCCCcee----EEecCCCCCCCceEEEEEecCCC-hhHHHHHHHHHHccccCcc
Q 015926 94 PETHSLAERVAAQSDAIELRSINWRKFKDGFPN----LFIPNAHGIRGQHVAFLASFSSP-GKIFEQLSVIYALPKLFVS 168 (398)
Q Consensus 94 ~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~----v~i~~~~~VrG~dV~ivqs~~~p-d~lmELll~i~alr~~gA~ 168 (398)
.+.-+||..+|..| |.++.-..-+++-.-|-. ..=++-.+|.||+++||...... ..++|. +..+++.|++
T Consensus 95 ~sGvPlAtmvA~el-g~elaiY~PrK~~~de~~~~~G~iS~NFa~V~gK~cvIVDDvittG~Ti~E~---Ie~lke~g~k 170 (203)
T COG0856 95 ISGVPLATMVAYEL-GKELAIYHPRKHRKDEGAGKGGSISSNFASVEGKRCVIVDDVITTGSTIKET---IEQLKEEGGK 170 (203)
T ss_pred ecCccHHHHHHHHh-CCceEEEecccccccccCCcCceeecccccccCceEEEEecccccChhHHHH---HHHHHHcCCC
Confidence 45678999999999 588876665555443210 01112358999999999877654 457776 7788899886
Q ss_pred ceEEee
Q 015926 169 SFTLVL 174 (398)
Q Consensus 169 ~ItaVi 174 (398)
-+.+++
T Consensus 171 pv~v~V 176 (203)
T COG0856 171 PVLVVV 176 (203)
T ss_pred cEEEEE
Confidence 654443
No 143
>PLN02501 digalactosyldiacylglycerol synthase
Probab=37.74 E-value=2e+02 Score=32.65 Aligned_cols=65 Identities=17% Similarity=0.228 Sum_probs=43.1
Q ss_pred CceEEEEEecCCC----hhHHHHHHHHHHccccCccceEEeeccCCCCCccccccCCC-cc-----hHHHHHHHHHc
Q 015926 137 GQHVAFLASFSSP----GKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGD-VA-----TAFTLARILSN 203 (398)
Q Consensus 137 G~dV~ivqs~~~p----d~lmELll~i~alr~~gA~~ItaViPY~~YsRQDr~~~~ge-~i-----sak~lA~lL~~ 203 (398)
+++|.||-+-+-| ..+..|+-.++-++. |-.+||+|+|+++-+-|... ++++ .+ .-..+-++|++
T Consensus 322 ~r~~~ivTtAslPWmTGtavnpL~rAayLa~~-~~~~VtlviPWl~~~dq~~v-y~~~~~F~~p~eQe~~ir~wl~~ 396 (794)
T PLN02501 322 KRHVAIVTTASLPWMTGTAVNPLFRAAYLAKS-AKQNVTLLVPWLCKSDQELV-YPNNLTFSSPEEQESYIRNWLEE 396 (794)
T ss_pred CCeEEEEEcccCcccccccccHHHHHHHhccc-CCceEEEEEecCCccccccc-cCCCcccCCHHHHHHHHHHHHHH
Confidence 5899999877666 356677777776665 46899999999997645433 3322 11 12366778854
No 144
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=37.52 E-value=35 Score=28.29 Aligned_cols=82 Identities=11% Similarity=0.084 Sum_probs=51.1
Q ss_pred CCCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHcc
Q 015926 84 TMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALP 163 (398)
Q Consensus 84 ~~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr 163 (398)
..+++.+++...+..+|+..+.++ .+++.....-++.++.. -.....+.-.|++|+=|.+.. --|++-.+..+|
T Consensus 4 ~~~~i~i~G~G~s~~~A~~~~~~l--~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~vi~is~sg~--~~~~~~~~~~ak 77 (131)
T PF01380_consen 4 KAKRIYIYGSGSSYGVAQYAALKL--QKLGRIVVISYEAGEFF--HGPLENLDPDDLVIIISYSGE--TRELIELLRFAK 77 (131)
T ss_dssp TSSEEEEEESTHHHHHHHHHHHHH--HHHHSSEEEEEEHHHHH--TTGGGGCSTTEEEEEEESSST--THHHHHHHHHHH
T ss_pred CCCEEEEEEcchHHHHHHHHHHHH--HHhcCcceeccchHHHh--hhhcccccccceeEeeecccc--chhhhhhhHHHH
Confidence 356788888888999999998887 35555555555555411 111234555788888775443 234444456778
Q ss_pred ccCccceE
Q 015926 164 KLFVSSFT 171 (398)
Q Consensus 164 ~~gA~~It 171 (398)
+.|++-|.
T Consensus 78 ~~g~~vi~ 85 (131)
T PF01380_consen 78 ERGAPVIL 85 (131)
T ss_dssp HTTSEEEE
T ss_pred hcCCeEEE
Confidence 88865533
No 145
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=36.90 E-value=1.8e+02 Score=23.01 Aligned_cols=34 Identities=15% Similarity=0.187 Sum_probs=26.0
Q ss_pred EEEEEeccccchHhHHHHHHHHHHc-CCCEEEEEE
Q 015926 303 HIVIVDDLVQSGGTLIECQKVLAAH-GAAKISAYV 336 (398)
Q Consensus 303 ~viIVDDii~TG~Tl~~aa~~Lk~~-GA~~V~~~~ 336 (398)
.+.+++|.-.+-..+..+.+.|++. +.+++.++.
T Consensus 13 ~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~ 47 (91)
T PF02875_consen 13 GPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVF 47 (91)
T ss_dssp TEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEE
Confidence 4667777989999999999999987 667777766
No 146
>PRK07322 adenine phosphoribosyltransferase; Provisional
Probab=36.51 E-value=3.3e+02 Score=24.75 Aligned_cols=92 Identities=14% Similarity=0.157 Sum_probs=52.4
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEee--CCCc------------eeEE-ec--CCCCCCCceEEEEEecCCC
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINWRKF--KDGF------------PNLF-IP--NAHGIRGQHVAFLASFSSP 149 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~F--pDGE------------~~v~-i~--~~~~VrG~dV~ivqs~~~p 149 (398)
.+.+=.....-.+|..+|..+ +.++.-+...+- .+++ .... +. ....++|++|+||-.+..-
T Consensus 54 d~Iv~v~~gGiplA~~lA~~L-~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT 132 (178)
T PRK07322 54 DVLVTPETKGIPLAHALSRRL-GKPYVVARKSRKPYMQDPIIQEVVSITTGKPQLLVLDGADAEKLKGKRVAIVDDVVST 132 (178)
T ss_pred CEEEEeccCCHHHHHHHHHHH-CCCEEEEEEeCCCCCCCceEEEEEEEEeccceEEEecCccccccCCCEEEEEeccccc
Confidence 444444556778999999999 588654322221 1121 0111 11 1124789999999887765
Q ss_pred hhHHHHHHHHHHccccCccceEEeeccCCCCCc
Q 015926 150 GKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTS 182 (398)
Q Consensus 150 d~lmELll~i~alr~~gA~~ItaViPY~~YsRQ 182 (398)
..-| .-+++.++++||+.+.+ +=.+.|..+
T Consensus 133 G~Tl--~aa~~~L~~~GA~~V~~-~~v~~~~~~ 162 (178)
T PRK07322 133 GGTL--TALERLVERAGGQVVAK-AAIFAEGDA 162 (178)
T ss_pred cHHH--HHHHHHHHHcCCEEEEE-EEEEEcCCC
Confidence 4433 34466789999876543 333344443
No 147
>PLN02962 hydroxyacylglutathione hydrolase
Probab=34.73 E-value=1.4e+02 Score=28.89 Aligned_cols=50 Identities=16% Similarity=0.081 Sum_probs=33.3
Q ss_pred CCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCc-hHHHHHhh
Q 015926 299 PRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPN-ASWERFKQ 351 (398)
Q Consensus 299 v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~-~a~~~l~~ 351 (398)
..++.++|||=.- .......+.+++.|.+-.+++.||+=+.- ++...|.+
T Consensus 33 ~~~~~avlIDP~~---~~~~~~l~~l~~~g~~i~~Il~TH~H~DHigg~~~l~~ 83 (251)
T PLN02962 33 HPDKPALLIDPVD---KTVDRDLSLVKELGLKLIYAMNTHVHADHVTGTGLLKT 83 (251)
T ss_pred CCCCEEEEECCCC---CcHHHHHHHHHHCCCeeEEEEcCCCCchhHHHHHHHHH
Confidence 3567899999421 23344557888889888899999997653 23444443
No 148
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=34.43 E-value=83 Score=27.49 Aligned_cols=59 Identities=22% Similarity=0.322 Sum_probs=41.0
Q ss_pred EEEEEeccc-cchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccC
Q 015926 303 HIVIVDDLV-QSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDS 369 (398)
Q Consensus 303 ~viIVDDii-~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdt 369 (398)
+++.+=-+. ++...+.+.++.|+++|...+.+++ -|.....-.+.+.+. |+++++-+-|
T Consensus 55 dii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~viv-GG~~~~~~~~~l~~~-------Gvd~~~~~gt 114 (132)
T TIGR00640 55 HVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVV-GGVIPPQDFDELKEM-------GVAEIFGPGT 114 (132)
T ss_pred CEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEE-eCCCChHhHHHHHHC-------CCCEEECCCC
Confidence 344444444 3556788889999999986655554 455556667778776 8999998876
No 149
>PRK11595 DNA utilization protein GntX; Provisional
Probab=34.05 E-value=1.5e+02 Score=28.13 Aligned_cols=75 Identities=16% Similarity=0.168 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHhCCCceeeeEEEeeCC--------C-ce--eE--EecCCCCCCCceEEEEEecCCChhHHHHHHHHHHc
Q 015926 96 THSLAERVAAQSDAIELRSINWRKFKD--------G-FP--NL--FIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYAL 162 (398)
Q Consensus 96 ~~~LA~~Ia~~l~~~~l~~~~~~~FpD--------G-E~--~v--~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~al 162 (398)
...+|+.+++.+ ++++..-.+.+-.+ . |. ++ .+....++.|++|+||-.+..-...| .-++++|
T Consensus 134 ~~~la~~la~~~-~~~~~~~~l~r~~~~~~q~~l~~~~R~~n~~~~f~~~~~~~~~~vllvDDv~tTG~Tl--~~~~~~L 210 (227)
T PRK11595 134 SDLLCRPLARWL-GCDYDSEALTRTRATATQHFLSARLRKRNLKNAFRLELPVQGQHMAIVDDVVTTGSTV--AEIAQLL 210 (227)
T ss_pred HHHHHHHHHHHH-CCCCcccceEEecCCCCcccCCHHHHhhhhhhhhccCCCCCCCEEEEEeeeecchHHH--HHHHHHH
Confidence 457899999988 57653211121111 0 00 00 01123468899999998776654332 3347788
Q ss_pred cccCccceEEe
Q 015926 163 PKLFVSSFTLV 173 (398)
Q Consensus 163 r~~gA~~ItaV 173 (398)
+++|+++|.++
T Consensus 211 ~~~g~~~V~~~ 221 (227)
T PRK11595 211 LRNGAASVQVW 221 (227)
T ss_pred HHcCCcEEEEE
Confidence 99999998765
No 150
>PF08410 DUF1737: Domain of unknown function (DUF1737); InterPro: IPR013619 This domain of unknown function is found at the N terminus of bacterial and viral hypothetical proteins.
Probab=33.75 E-value=1.4e+02 Score=22.41 Aligned_cols=38 Identities=18% Similarity=0.286 Sum_probs=28.7
Q ss_pred CcEEEEeCCCCHHHHHHHHHHhC-CCceeeeEEEeeCCC
Q 015926 86 KKVCLFYCPETHSLAERVAAQSD-AIELRSINWRKFKDG 123 (398)
Q Consensus 86 ~~~~lfsg~s~~~LA~~Ia~~l~-~~~l~~~~~~~FpDG 123 (398)
+.+.++.+++...|+++|.+.|. |.++...-.-.|..+
T Consensus 4 ~~Yr~lt~~d~~~fc~rVt~aL~~GW~l~GsP~~t~~~~ 42 (54)
T PF08410_consen 4 KHYRVLTGPDDSAFCHRVTEALNEGWQLYGSPTYTFDGG 42 (54)
T ss_pred ceeEEEECCChHHHHHHHHHHHHcCCEecCCceEEECCC
Confidence 34999999999999999998873 466655555556553
No 151
>PRK13809 orotate phosphoribosyltransferase; Provisional
Probab=33.74 E-value=1.9e+02 Score=27.27 Aligned_cols=71 Identities=15% Similarity=0.068 Sum_probs=45.0
Q ss_pred CCHHHHHHHHHHhCCCceeeeEEEeeCCCcee-EEecCCCCCCCceEEEEEecCCCh-hHHHHHHHHHHccccCccce
Q 015926 95 ETHSLAERVAAQSDAIELRSINWRKFKDGFPN-LFIPNAHGIRGQHVAFLASFSSPG-KIFEQLSVIYALPKLFVSSF 170 (398)
Q Consensus 95 s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~-v~i~~~~~VrG~dV~ivqs~~~pd-~lmELll~i~alr~~gA~~I 170 (398)
..-.+|..+|..+ +.++....-..--.|+.. +++.. .-.+|++|+||-.+-.-. .+.| .+++++++|++-+
T Consensus 77 ~Gi~~A~~vA~~l-~~p~~~~RK~~K~~G~~~~~~~~g-~~~~g~~VlIVDDViTTG~Ti~~---a~~~L~~~G~~vv 149 (206)
T PRK13809 77 TALTLATSISLKY-NIPMVLRRKELKNVDPSDAIKVEG-LFTPGQTCLVINDMVSSGKSIIE---TAVALEEEGLVVR 149 (206)
T ss_pred ccHHHHHHHHHHh-CCCEEEEeCCCCCCCCcCEEEEcc-ccCCCCEEEEEEeccccCHHHHH---HHHHHHHCCCEEE
Confidence 4668999999998 688876544222335433 33431 235899999998765542 3333 4677778887643
No 152
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=33.43 E-value=2e+02 Score=23.84 Aligned_cols=78 Identities=15% Similarity=0.009 Sum_probs=46.9
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHccccC
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLF 166 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~g 166 (398)
++.++....+..+|+.++.++. .++.. ..-..|+|. +.. ....++-+|++|+-|.+.. --|++-++..+|+.|
T Consensus 2 ~I~i~G~G~S~~~a~~~~~~l~--~~g~~-~~~~~~~~~-~~~-~~~~~~~~d~vi~iS~sG~--t~~~~~~~~~a~~~g 74 (128)
T cd05014 2 KVVVTGVGKSGHIARKIAATLS--STGTP-AFFLHPTEA-LHG-DLGMVTPGDVVIAISNSGE--TDELLNLLPHLKRRG 74 (128)
T ss_pred eEEEEeCcHhHHHHHHHHHHhh--cCCCc-eEEcccchh-hcc-ccCcCCCCCEEEEEeCCCC--CHHHHHHHHHHHHCC
Confidence 4677777788889999988873 23322 223355542 111 1234566789888887653 224455567788888
Q ss_pred ccceE
Q 015926 167 VSSFT 171 (398)
Q Consensus 167 A~~It 171 (398)
++-|.
T Consensus 75 ~~vi~ 79 (128)
T cd05014 75 APIIA 79 (128)
T ss_pred CeEEE
Confidence 65443
No 153
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=32.74 E-value=73 Score=25.44 Aligned_cols=31 Identities=13% Similarity=0.277 Sum_probs=24.7
Q ss_pred CCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEE
Q 015926 300 RGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISA 334 (398)
Q Consensus 300 ~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~ 334 (398)
+++.++++ |.+|..-..+++.|++.|.. ++.
T Consensus 60 ~~~~ivv~---C~~G~rs~~aa~~L~~~G~~-~~~ 90 (100)
T cd01523 60 DDQEVTVI---CAKEGSSQFVAELLAERGYD-VDY 90 (100)
T ss_pred CCCeEEEE---cCCCCcHHHHHHHHHHcCce-eEE
Confidence 46677775 78998889999999999987 543
No 154
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=32.35 E-value=99 Score=27.80 Aligned_cols=46 Identities=15% Similarity=0.305 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccC
Q 015926 316 TLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDS 369 (398)
Q Consensus 316 Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdt 369 (398)
.+..+.+.|+++|+..|.++ .=|+.+.+-++++++. |+++++.-.|
T Consensus 79 l~~~lve~lre~G~~~i~v~-~GGvip~~d~~~l~~~-------G~~~if~pgt 124 (143)
T COG2185 79 LVPGLVEALREAGVEDILVV-VGGVIPPGDYQELKEM-------GVDRIFGPGT 124 (143)
T ss_pred HHHHHHHHHHHhCCcceEEe-ecCccCchhHHHHHHh-------CcceeeCCCC
Confidence 45568899999999999943 3477777778888886 8999997654
No 155
>cd04814 PA_M28_1 PA_M28_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1. A subfamily of PA-domain containing proteins belonging to the peptidase family M28. Family M28 contains aminopeptidases and carboxypeptidases, and has co-catalytic zinc ions. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following members of the peptidase family M28: i) prostate-specific membrane antigen (PSMA), ii) yeast aminopeptidase Y, and ii) human TfR (transferrin receptor)1 and human TfR2. The proteins listed above belong to other subfamilies, relatively little is known a
Probab=31.62 E-value=96 Score=27.71 Aligned_cols=41 Identities=27% Similarity=0.269 Sum_probs=30.2
Q ss_pred eCCCCCCEEEEEecccc-------chH-------hHHHHHHHHHHcCCCEEEEEE
Q 015926 296 EGDPRGRHIVIVDDLVQ-------SGG-------TLIECQKVLAAHGAAKISAYV 336 (398)
Q Consensus 296 ~g~v~gk~viIVDDii~-------TG~-------Tl~~aa~~Lk~~GA~~V~~~~ 336 (398)
..|++||.|++..+-.+ .|+ ++..=++..+++||.-|.++.
T Consensus 43 g~DVkGKIVlv~~g~P~~~~~~~~~~~~~~~~~~~~~~K~~~A~~~GA~gvIii~ 97 (142)
T cd04814 43 GLDVKGKVVVVLRNDPQGEPGAGDFGGKAMTYYGRWTYKYEEAARHGAAGVLIVH 97 (142)
T ss_pred CCCCCCcEEEEEcCCCCcccccccccccccccccCHHHHHHHHHHCCCcEEEEEe
Confidence 34899999988866542 111 577777888999999888775
No 156
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=31.00 E-value=88 Score=25.05 Aligned_cols=33 Identities=12% Similarity=0.245 Sum_probs=26.4
Q ss_pred CCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEE
Q 015926 300 RGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAY 335 (398)
Q Consensus 300 ~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~ 335 (398)
+++.+++++ .+|..-..++..|++.|.+.|+.+
T Consensus 60 ~~~~ivvyC---~~G~rs~~a~~~L~~~G~~~v~~l 92 (101)
T cd01518 60 KGKKVLMYC---TGGIRCEKASAYLKERGFKNVYQL 92 (101)
T ss_pred CCCEEEEEC---CCchhHHHHHHHHHHhCCcceeee
Confidence 677888886 478777888889999998877654
No 157
>cd04820 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 1. A subgroup of PA-domain containing proteins belonging to the peptidase family M28. Family M28 contains aminopeptidases and carboxypeptidases, and has co-catalytic zinc ions. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following members of the peptidase family M28: i) prostate-specific membrane antigen (PSMA), ii) yeast aminopeptidase Y, and ii) human TfR (transferrin receptor)1 and human TfR2. The proteins listed above belong to other subgroups; relatively litt
Probab=30.02 E-value=1e+02 Score=27.34 Aligned_cols=41 Identities=17% Similarity=0.122 Sum_probs=30.7
Q ss_pred eCCCCCCEEEEEeccccch--------HhHHHHHHHHHHcCCCEEEEEE
Q 015926 296 EGDPRGRHIVIVDDLVQSG--------GTLIECQKVLAAHGAAKISAYV 336 (398)
Q Consensus 296 ~g~v~gk~viIVDDii~TG--------~Tl~~aa~~Lk~~GA~~V~~~~ 336 (398)
..|++||.||+.....+.. ++...=.+.+.++||.-|.++.
T Consensus 45 ~iDVkGKIVlv~~g~p~~~~~~~~~~~~~~~~K~~~A~~~GA~aVIi~~ 93 (137)
T cd04820 45 GLDVKGKIVVVLSGGPAGIPSEEGAHAHSSNEKARYAAKAGAIGMITLT 93 (137)
T ss_pred CCCCCCeEEEEEcCCCCccccccccccccHHHHHHHHHHCCCeEEEEEe
Confidence 3489999998887765421 3566677888999999888775
No 158
>PRK07847 amidophosphoribosyltransferase; Provisional
Probab=29.43 E-value=2.3e+02 Score=30.69 Aligned_cols=86 Identities=10% Similarity=0.048 Sum_probs=53.0
Q ss_pred EEEEeCCCCHHHHHHHHHHhCCCceeeeEEEe-e-------CC---CceeEEec---CCCCCCCceEEEEEecCCChhHH
Q 015926 88 VCLFYCPETHSLAERVAAQSDAIELRSINWRK-F-------KD---GFPNLFIP---NAHGIRGQHVAFLASFSSPGKIF 153 (398)
Q Consensus 88 ~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~-F-------pD---GE~~v~i~---~~~~VrG~dV~ivqs~~~pd~lm 153 (398)
+.+-.-.+....|..+|+.+ |+++...-.+. + |. -+..++++ +.+.+.||.|++|-....-...+
T Consensus 305 ~VvpVP~sG~~~A~g~a~~~-gip~~~~l~kn~~~grtfi~~~q~~r~~~~r~k~~~~~~~~~gk~vllVDD~ittG~T~ 383 (510)
T PRK07847 305 LVIPVPESGTPAAVGYAQES-GIPFGQGLVKNAYVGRTFIQPSQTIRQLGIRLKLNPLREVIRGKRLVVVDDSIVRGNTQ 383 (510)
T ss_pred EEEeccCchHHHHHHHHHHh-CCChhhceEeecccccCccCcchhhhhhceeeecCccccccCCCEEEEEecccCchHHH
Confidence 44444445678899999999 68875532221 1 11 11123333 13457899999986544333333
Q ss_pred HHHHHHHHccccCccceEEeecc
Q 015926 154 EQLSVIYALPKLFVSSFTLVLPF 176 (398)
Q Consensus 154 ELll~i~alr~~gA~~ItaViPY 176 (398)
.-++..|+++||++|.+-+--
T Consensus 384 --~~~~~~L~~~ga~~v~~ri~s 404 (510)
T PRK07847 384 --RALVRMLREAGAAEVHVRISS 404 (510)
T ss_pred --HHHHHHHHHcCCCEEEEEECC
Confidence 356888999999999887643
No 159
>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.
Probab=28.97 E-value=1e+02 Score=24.68 Aligned_cols=33 Identities=18% Similarity=0.353 Sum_probs=27.1
Q ss_pred CCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEE
Q 015926 300 RGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAY 335 (398)
Q Consensus 300 ~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~ 335 (398)
+++.++|+++ +|..-..++..|++.|-..|+.+
T Consensus 57 ~~~~vv~~c~---~g~rs~~~~~~l~~~G~~~v~~l 89 (101)
T cd01528 57 PDKDIVVLCH---HGGRSMQVAQWLLRQGFENVYNL 89 (101)
T ss_pred CCCeEEEEeC---CCchHHHHHHHHHHcCCccEEEe
Confidence 5788999864 68888889999999999888754
No 160
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=28.75 E-value=92 Score=24.90 Aligned_cols=33 Identities=9% Similarity=0.273 Sum_probs=27.2
Q ss_pred CCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEE
Q 015926 300 RGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAY 335 (398)
Q Consensus 300 ~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~ 335 (398)
+++.+++++ .+|.+-..++..|+..|-+.|+.+
T Consensus 65 ~~~~ivv~c---~~g~~s~~~~~~l~~~G~~~v~~~ 97 (106)
T cd01519 65 KDKELIFYC---KAGVRSKAAAELARSLGYENVGNY 97 (106)
T ss_pred CCCeEEEEC---CCcHHHHHHHHHHHHcCCccceec
Confidence 578888885 478888889999999999888765
No 161
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=28.73 E-value=3.7e+02 Score=25.89 Aligned_cols=81 Identities=17% Similarity=0.189 Sum_probs=49.7
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeC-------------CCc-eeEEecCCCCCCCceEEEEEecCCChhH
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINWRKFK-------------DGF-PNLFIPNAHGIRGQHVAFLASFSSPGKI 152 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~Fp-------------DGE-~~v~i~~~~~VrG~dV~ivqs~~~pd~l 152 (398)
++.+-.....-.+|..+|..| |+++.-+.-.+.+ .|. ..++++-..-.+|+.|+||-.+-.-..-
T Consensus 113 D~Vvtv~~~GI~lA~~lA~~L-~~p~vi~Rk~~~~~~~~~v~~y~s~s~~~~~~~~l~~~~l~~G~rVLIVDDvi~TG~T 191 (238)
T PRK08558 113 DVVLTAATDGIPLAVAIASYF-GADLVYAKKSKETGVEKFYEEYQRLASGIEVTLYLPASALKKGDRVLIVDDIIRSGET 191 (238)
T ss_pred CEEEEECcccHHHHHHHHHHH-CcCEEEEEecCCCCCcceEEEeeccCCCceeEEEecHHHcCCcCEEEEEecccccCHH
Confidence 566666677889999999999 6887754332211 111 1222321123589999999877654322
Q ss_pred HHHHHHHHHccccCccce
Q 015926 153 FEQLSVIYALPKLFVSSF 170 (398)
Q Consensus 153 mELll~i~alr~~gA~~I 170 (398)
+.-+++.++++||+-+
T Consensus 192 --l~~~~~ll~~~ga~vv 207 (238)
T PRK08558 192 --QRALLDLARQAGADVV 207 (238)
T ss_pred --HHHHHHHHHHcCCEEE
Confidence 2345677888887544
No 162
>KOG0814 consensus Glyoxylase [General function prediction only]
Probab=28.63 E-value=69 Score=30.12 Aligned_cols=44 Identities=23% Similarity=0.283 Sum_probs=37.5
Q ss_pred EEeeCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEec
Q 015926 293 RIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHG 339 (398)
Q Consensus 293 ~~~~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~ 339 (398)
..+.+|.+.+..+|||-+..| ...-++.+++.|-+-+|++-||-
T Consensus 23 tYll~d~~~~~AviIDPV~et---~~RD~qlikdLgl~LiYa~NTH~ 66 (237)
T KOG0814|consen 23 TYLLGDHKTGKAVIIDPVLET---VSRDAQLIKDLGLDLIYALNTHV 66 (237)
T ss_pred EEEeeeCCCCceEEecchhhc---ccchHHHHHhcCceeeeeeccee
Confidence 356789999999999999865 55677889999999999999985
No 163
>PF10662 PduV-EutP: Ethanolamine utilisation - propanediol utilisation; InterPro: IPR012381 Members of this family function in ethanolamine [] and propanediol [] degradation pathways. Both pathways require coenzyme B12 (adenosylcobalamin, AdoCbl). Bacteria that harbour these pathways can use ethanolamine as a source of carbon and nitrogen, or propanediol as a sole carbon and energy source, respectively. The exact roles of the EutP and PduV proteins in these respective pathways are not yet determined. Members of this family contain P-loop consensus motifs in the N-terminal part, and are distantly related to various GTPases and ATPases, including ATPase components of transport systems. Propanediol degradation is thought to be important for the natural Salmonella populations, since propanediol is produced by the fermentation of the common plant sugars rhamnose and fucose [, ]. More than 1% of the Salmonella enterica genome is devoted to the utilisation of propanediol and cobalamin biosynthesis. In vivo expression technology has indicated that propanediol utilisation (pdu) genes may be important for growth in host tissues, and competitive index studies with mice have shown that pdu mutations confer a virulence defect [, ]. The pdu operon is contiguous and co-regulated with the cobalamin (B12) biosynthesis cob operon, indicating that propanediol catabolism may be the primary reason for de novo B12 synthesis in Salmonella [, , ]. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO, IPR009191 from INTERPRO, IPR009192 from INTERPRO for more details on the propanediol utilisation pathway and the pdu operon.; GO: 0005524 ATP binding, 0006576 cellular biogenic amine metabolic process
Probab=28.61 E-value=91 Score=27.92 Aligned_cols=40 Identities=20% Similarity=0.247 Sum_probs=32.4
Q ss_pred ccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhh
Q 015926 309 DLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQ 351 (398)
Q Consensus 309 Dii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~ 351 (398)
|...+...+..|.+.|+.+|+++|+.+. ..++..++.|.+
T Consensus 100 Dl~~~~~~i~~a~~~L~~aG~~~if~vS---~~~~eGi~eL~~ 139 (143)
T PF10662_consen 100 DLPSDDANIERAKKWLKNAGVKEIFEVS---AVTGEGIEELKD 139 (143)
T ss_pred cCccchhhHHHHHHHHHHcCCCCeEEEE---CCCCcCHHHHHH
Confidence 5666778899999999999999997775 567777777765
No 164
>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.
Probab=27.83 E-value=93 Score=24.65 Aligned_cols=33 Identities=21% Similarity=0.380 Sum_probs=24.9
Q ss_pred CCCEEEEEeccccchHh--HHHHHHHHHHcCCCEEEEE
Q 015926 300 RGRHIVIVDDLVQSGGT--LIECQKVLAAHGAAKISAY 335 (398)
Q Consensus 300 ~gk~viIVDDii~TG~T--l~~aa~~Lk~~GA~~V~~~ 335 (398)
+++.++|+. .+|.. ...++..|++.|-++|+.+
T Consensus 49 ~~~~ivl~c---~~G~~~~s~~aa~~L~~~G~~~v~~l 83 (92)
T cd01532 49 RDTPIVVYG---EGGGEDLAPRAARRLSELGYTDVALL 83 (92)
T ss_pred CCCeEEEEe---CCCCchHHHHHHHHHHHcCccCEEEc
Confidence 466788885 46643 5788899999999988743
No 165
>PRK06388 amidophosphoribosyltransferase; Provisional
Probab=27.41 E-value=2.5e+02 Score=30.01 Aligned_cols=87 Identities=13% Similarity=0.066 Sum_probs=51.5
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeee------EEEeeC--CCc---eeEEec---CCCCCCCceEEEEEecCCChhH
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSI------NWRKFK--DGF---PNLFIP---NAHGIRGQHVAFLASFSSPGKI 152 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~------~~~~Fp--DGE---~~v~i~---~~~~VrG~dV~ivqs~~~pd~l 152 (398)
.+.+-.-.+....|..+|+.+ |+++... ..++|- ..+ ..+++. ..+.+.|++|++|-....-...
T Consensus 293 D~VvpVP~s~~~~A~g~a~~~-gip~~~~L~r~r~~~r~fi~~~q~~R~~~~~~kl~~~~~~i~gk~VlLVDDsittGtT 371 (474)
T PRK06388 293 DVVVPVPDSGRSQAIGFSMAS-GIPYTEGLIKNRYSERTFIMPTQSDRKAAIKLKLNPIREVISGKRIVLVDDSIVRGNT 371 (474)
T ss_pred cEEEeeCCCcHHHHHHHHHHh-CCCchhheEEecccCCcccCCchhhhhhceeEEeccccccccCceEEEEeCeECcHHH
Confidence 344444444556799999998 6887432 122221 211 112332 2235689999998655443333
Q ss_pred HHHHHHHHHccccCccceEEeecc
Q 015926 153 FEQLSVIYALPKLFVSSFTLVLPF 176 (398)
Q Consensus 153 mELll~i~alr~~gA~~ItaViPY 176 (398)
+. -++++|+++||+.|.+.+--
T Consensus 372 l~--~~~~~L~~aGak~V~~ri~s 393 (474)
T PRK06388 372 MR--FIVKIMRKYGAKEVHVRIGS 393 (474)
T ss_pred HH--HHHHHHHHcCCCEEEEEeCC
Confidence 32 46788999999999887643
No 166
>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.
Probab=25.27 E-value=1.1e+02 Score=24.32 Aligned_cols=33 Identities=21% Similarity=0.164 Sum_probs=25.5
Q ss_pred CCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEE
Q 015926 300 RGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAY 335 (398)
Q Consensus 300 ~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~ 335 (398)
+++.+++ ++.+|.....++..|++.|...|+.+
T Consensus 53 ~~~~iv~---~c~~g~~s~~~~~~L~~~g~~~v~~l 85 (99)
T cd01527 53 GANAIIF---HCRSGMRTQQNAERLAAISAGEAYVL 85 (99)
T ss_pred CCCcEEE---EeCCCchHHHHHHHHHHcCCccEEEe
Confidence 4566666 47889888899999999998866543
No 167
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=24.94 E-value=1.3e+02 Score=30.77 Aligned_cols=37 Identities=8% Similarity=0.116 Sum_probs=32.1
Q ss_pred eCCCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEE
Q 015926 296 EGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYV 336 (398)
Q Consensus 296 ~g~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~ 336 (398)
.+++.||+++|| -+|.+-..+++.|.+.|+++|+++-
T Consensus 169 ~~~l~~k~vLvI----GaGem~~l~a~~L~~~g~~~i~v~n 205 (338)
T PRK00676 169 RQKSKKASLLFI----GYSEINRKVAYYLQRQGYSRITFCS 205 (338)
T ss_pred hCCccCCEEEEE----cccHHHHHHHHHHHHcCCCEEEEEc
Confidence 478999999986 4799999999999999999888764
No 168
>PF04015 DUF362: Domain of unknown function (DUF362) ; InterPro: IPR007160 This domain is found in some iron-sulphur proteins.
Probab=24.20 E-value=2.3e+02 Score=26.04 Aligned_cols=83 Identities=17% Similarity=0.119 Sum_probs=48.1
Q ss_pred cccchHhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCC----CCccEEEEccCcccccccccCCCCeEE
Q 015926 310 LVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPE----SGLTYFWISDSCPVTVKEVMSKPPFEV 385 (398)
Q Consensus 310 ii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~----~~~~~iv~tdtip~~~~~~~~~~k~~v 385 (398)
++|.-.-+.++++.|+++|+++|.+.-.=+....+..+.++.. |+.. .|+ +++-.|.-+...........+..
T Consensus 18 ~~T~P~vv~avv~~l~~~g~~~i~i~e~~~~~~~~~~~~~~~~--G~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~ 94 (206)
T PF04015_consen 18 ATTHPEVVRAVVEMLKEAGAKEIIIAESPGSGAADTREVFKRS--GYEEIAEEYGA-ELVDLDDEPWVEVPLPGGEHLKE 94 (206)
T ss_pred ccCCHHHHHHHHHHHHHcCCCceEEEeCCCcchHhHHHHHHHc--chhhHHHhcCC-cEEEccCCcccceeccCCeeeee
Confidence 4555578888999999999998887752222112344444433 1110 122 55666665543211112345788
Q ss_pred EechHHHHhh
Q 015926 386 LSLAGSIASA 395 (398)
Q Consensus 386 lsva~liAe~ 395 (398)
+.++..++|+
T Consensus 95 ~~v~~~~~ea 104 (206)
T PF04015_consen 95 FKVPRILLEA 104 (206)
T ss_pred EEhhHHHHhC
Confidence 8888888874
No 169
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=24.09 E-value=2.5e+02 Score=30.94 Aligned_cols=37 Identities=22% Similarity=0.533 Sum_probs=30.7
Q ss_pred CCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEec
Q 015926 299 PRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHG 339 (398)
Q Consensus 299 v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~ 339 (398)
..||+|+||- .|.|-.+++..+.+.|+++|+++.-+.
T Consensus 466 ~~gk~VvVIG----gG~~a~d~A~~a~r~ga~~Vt~i~~~~ 502 (654)
T PRK12769 466 TAGLNVVVLG----GGDTAMDCVRTALRHGASNVTCAYRRD 502 (654)
T ss_pred CCCCeEEEEC----CcHHHHHHHHHHHHcCCCeEEEeEecC
Confidence 5789999985 778888999999999999998876543
No 170
>PRK15482 transcriptional regulator MurR; Provisional
Probab=23.90 E-value=1.3e+02 Score=29.10 Aligned_cols=80 Identities=9% Similarity=-0.064 Sum_probs=50.1
Q ss_pred CCCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHcc
Q 015926 84 TMKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALP 163 (398)
Q Consensus 84 ~~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr 163 (398)
..+.+.+|+...+..+|+.++..|. .++. .+.-+.|+.. .......+...||+|+=|.+.. --|++-+++.++
T Consensus 134 ~A~~I~i~G~G~S~~~A~~l~~~l~--~~g~-~~~~~~d~~~--~~~~~~~~~~~Dv~i~iS~sg~--t~~~~~~~~~a~ 206 (285)
T PRK15482 134 KAPFIQITGLGGSALVGRDLSFKLM--KIGY-RVACEADTHV--QATVSQALKKGDVQIAISYSGS--KKEIVLCAEAAR 206 (285)
T ss_pred hCCeeEEEEeChhHHHHHHHHHHHH--hCCC-eeEEeccHhH--HHHHHhcCCCCCEEEEEeCCCC--CHHHHHHHHHHH
Confidence 3567999998889999999998872 3332 1222345431 1111234566799999887653 234555677788
Q ss_pred ccCccce
Q 015926 164 KLFVSSF 170 (398)
Q Consensus 164 ~~gA~~I 170 (398)
+.|++-|
T Consensus 207 ~~g~~iI 213 (285)
T PRK15482 207 KQGATVI 213 (285)
T ss_pred HCCCEEE
Confidence 8886543
No 171
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=23.81 E-value=1.4e+02 Score=23.30 Aligned_cols=31 Identities=16% Similarity=0.262 Sum_probs=24.1
Q ss_pred CCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEE
Q 015926 301 GRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAY 335 (398)
Q Consensus 301 gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~ 335 (398)
+++++++. ++|.....++..|++.|- +|+.+
T Consensus 51 ~~~vvl~c---~~g~~a~~~a~~L~~~G~-~v~~l 81 (90)
T cd01524 51 DKEIIVYC---AVGLRGYIAARILTQNGF-KVKNL 81 (90)
T ss_pred CCcEEEEc---CCChhHHHHHHHHHHCCC-CEEEe
Confidence 56788884 468888889999999998 66554
No 172
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=23.28 E-value=46 Score=32.17 Aligned_cols=24 Identities=25% Similarity=0.426 Sum_probs=20.8
Q ss_pred HHHHHHccccCccceEEeeccCCC
Q 015926 156 LSVIYALPKLFVSSFTLVLPFFPT 179 (398)
Q Consensus 156 ll~i~alr~~gA~~ItaViPY~~Y 179 (398)
.-+++||+.+|++||-++-||.+.
T Consensus 109 ~A~~~AL~alg~~RIalvTPY~~~ 132 (239)
T TIGR02990 109 SAAVDGLAALGVRRISLLTPYTPE 132 (239)
T ss_pred HHHHHHHHHcCCCEEEEECCCcHH
Confidence 356789999999999999999865
No 173
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=23.23 E-value=1.5e+02 Score=29.08 Aligned_cols=35 Identities=23% Similarity=0.271 Sum_probs=30.6
Q ss_pred CCCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEE
Q 015926 298 DPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYV 336 (398)
Q Consensus 298 ~v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~ 336 (398)
+++||+|+|+ -.|++-..++..|.+.|+++|+++-
T Consensus 122 ~~~~k~vlvl----GaGGaarai~~aL~~~G~~~i~I~n 156 (282)
T TIGR01809 122 PLAGFRGLVI----GAGGTSRAAVYALASLGVTDITVIN 156 (282)
T ss_pred ccCCceEEEE----cCcHHHHHHHHHHHHcCCCeEEEEe
Confidence 4689999876 6899999999999999999999874
No 174
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=23.07 E-value=3.5e+02 Score=29.72 Aligned_cols=69 Identities=16% Similarity=0.191 Sum_probs=0.0
Q ss_pred CCceEEEEEecCCChhHHHHHHHHHHccccCccceEEeeccCCCCCccccccCCCcchHHHHHHHHHcCCCCCCCCCEEE
Q 015926 136 RGQHVAFLASFSSPGKIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLV 215 (398)
Q Consensus 136 rG~dV~ivqs~~~pd~lmELll~i~alr~~gA~~ItaViPY~~YsRQDr~~~~ge~isak~lA~lL~~~~~~~aG~D~II 215 (398)
+++.|.|+.. ++-|=+--..++..++++.|+..+...+| .++.+|=-++...+-++.+. |++.||
T Consensus 68 ~~e~I~I~gD-yD~DGitstail~~~L~~~g~~~~~~~IP--------~R~~eGYGl~~~~i~~~~~~------~~~LiI 132 (575)
T PRK11070 68 EGTRIIVVGD-FDADGATSTALSVLALRSLGCSNVDYLVP--------NRFEDGYGLSPEVVDQAHAR------GAQLIV 132 (575)
T ss_pred CCCEEEEEEe-cCccHHHHHHHHHHHHHHcCCCceEEEeC--------CCCcCCCCCCHHHHHHHHhc------CCCEEE
Q ss_pred EEcC
Q 015926 216 TFDI 219 (398)
Q Consensus 216 tVDL 219 (398)
|||.
T Consensus 133 tvD~ 136 (575)
T PRK11070 133 TVDN 136 (575)
T ss_pred EEcC
No 175
>PRK10997 yieM hypothetical protein; Provisional
Probab=23.05 E-value=3e+02 Score=29.67 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=43.2
Q ss_pred CCCCEEEEEeccccch--HhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccC
Q 015926 299 PRGRHIVIVDDLVQSG--GTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDS 369 (398)
Q Consensus 299 v~gk~viIVDDii~TG--~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdt 369 (398)
.++-.++||-|.+..+ ..+.+..+.|++.+..++++++. +-...+.+.++ +|++|.-|+
T Consensus 415 ~r~adIVVISDF~~~~~~eel~~~L~~Lk~~~~~rf~~l~i-~~~~~p~l~~i-----------fD~~W~~d~ 475 (487)
T PRK10997 415 WFDADAVVISDFIAQRLPDELVAKVKELQRQHQHRFHAVAM-SAHGKPGIMRI-----------FDHIWRFDT 475 (487)
T ss_pred cCCceEEEECCCCCCCChHHHHHHHHHHHHhcCcEEEEEEe-CCCCCchHHHh-----------cCeeeEecC
Confidence 4556899999999866 67888999999988899998874 22223334333 689998885
No 176
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=23.02 E-value=1.3e+02 Score=25.96 Aligned_cols=54 Identities=22% Similarity=0.337 Sum_probs=35.3
Q ss_pred HhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccCc
Q 015926 315 GTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSC 370 (398)
Q Consensus 315 ~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdti 370 (398)
-|+.++.+.|.+.|.++|.+.-+| ++.+.-++.|.+.-... +.+..+|.++.-+
T Consensus 56 p~~~eaL~~l~~~G~~~V~V~Pl~-l~~G~e~~di~~~v~~~-~~~~~~i~~g~pL 109 (127)
T cd03412 56 DTPEEALAKLAADGYTEVIVQSLH-IIPGEEYEKLKREVDAF-KKGFKKIKLGRPL 109 (127)
T ss_pred CCHHHHHHHHHHCCCCEEEEEeCe-eECcHHHHHHHHHHHHH-hCCCceEEEccCC
Confidence 478899999999999999999877 66665555555431000 0124566666643
No 177
>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily. Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.
Probab=22.53 E-value=1.5e+02 Score=23.59 Aligned_cols=33 Identities=24% Similarity=0.346 Sum_probs=25.6
Q ss_pred CCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEE
Q 015926 300 RGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAY 335 (398)
Q Consensus 300 ~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~ 335 (398)
.++.+++++ .+|.+...++..|+..|...|+.+
T Consensus 64 ~~~~vv~~c---~~g~~s~~~a~~L~~~G~~~v~~l 96 (105)
T cd01525 64 KGKIIVIVS---HSHKHAALFAAFLVKCGVPRVCIL 96 (105)
T ss_pred cCCeEEEEe---CCCccHHHHHHHHHHcCCCCEEEE
Confidence 367788875 567777788889999999988754
No 178
>cd05009 SIS_GlmS_GlmD_2 SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=22.47 E-value=2.3e+02 Score=24.04 Aligned_cols=85 Identities=9% Similarity=-0.093 Sum_probs=50.2
Q ss_pred CCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHccc
Q 015926 85 MKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPK 164 (398)
Q Consensus 85 ~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~ 164 (398)
.+.+.++....+-..|...+.++ .+...+...-|.++| ..-.....+..++++|+-+.... .--++.-++..+++
T Consensus 13 ~~~i~~~G~G~s~~~a~e~~~kl--~e~~~i~~~~~~~~e--~~hg~~~~~~~~~~vi~is~~g~-t~~~~~~~~~~~~~ 87 (153)
T cd05009 13 AKSFYVLGRGPNYGTALEGALKL--KETSYIHAEAYSAGE--FKHGPIALVDEGTPVIFLAPEDR-LEEKLESLIKEVKA 87 (153)
T ss_pred cCcEEEEcCCCCHHHHHHHHHHH--HHHHhhcceeccHHH--hccChhhhccCCCcEEEEecCCh-hHHHHHHHHHHHHH
Confidence 56677777667888888888776 355555566677765 22222345666777666554332 11224456677777
Q ss_pred cCccceEEeec
Q 015926 165 LFVSSFTLVLP 175 (398)
Q Consensus 165 ~gA~~ItaViP 175 (398)
.|++ +.++..
T Consensus 88 ~~~~-vi~it~ 97 (153)
T cd05009 88 RGAK-VIVITD 97 (153)
T ss_pred cCCE-EEEEec
Confidence 7753 444443
No 179
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=21.61 E-value=6.5e+02 Score=23.30 Aligned_cols=79 Identities=5% Similarity=-0.024 Sum_probs=47.8
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEE-eeC---------------CCceeEEecCCCCCCCceEEEEEecCCCh
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINWR-KFK---------------DGFPNLFIPNAHGIRGQHVAFLASFSSPG 150 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~-~Fp---------------DGE~~v~i~~~~~VrG~dV~ivqs~~~pd 150 (398)
+..+=.....-.||..+|..| |.++..+.-. +.+ .++..+.++...--+|+.|+||-.+-.--
T Consensus 52 d~Vv~~ea~Gi~la~~lA~~L-g~p~v~vRK~~k~~~~~~~~~~~~~s~~~~~~~~l~i~~~~l~~G~rVLIVDDvvtTG 130 (191)
T TIGR01744 52 TKIVTIEASGIAPAIMTGLKL-GVPVVFARKKKPLTLTDNLLTASVHSFTKQTTSTVAVSGEFLSDQDRVLIIDDFLANG 130 (191)
T ss_pred CEEEEEccccHHHHHHHHHHH-CCCEEEEEeCCCCCCCCcceEEEEEEeecCccEEEEEEHHhCCCcCEEEEEEehhccC
Confidence 344444566779999999999 5877655433 122 23334455432223799999998765542
Q ss_pred hHHHHHHHHHHccccCcc
Q 015926 151 KIFEQLSVIYALPKLFVS 168 (398)
Q Consensus 151 ~lmELll~i~alr~~gA~ 168 (398)
.- +.-+++.++++||.
T Consensus 131 gT--~~a~~~ll~~aGa~ 146 (191)
T TIGR01744 131 QA--AHGLVDIAKQAGAK 146 (191)
T ss_pred hH--HHHHHHHHHHCCCE
Confidence 21 23446678888874
No 180
>PRK05320 rhodanese superfamily protein; Provisional
Probab=21.40 E-value=1.5e+02 Score=28.83 Aligned_cols=34 Identities=12% Similarity=0.142 Sum_probs=29.8
Q ss_pred CCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEE
Q 015926 299 PRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAY 335 (398)
Q Consensus 299 v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~ 335 (398)
+++|.++++ |++|..-..|+..|++.|-+.|+-+
T Consensus 173 ~kdk~Ivvy---C~~G~Rs~~Aa~~L~~~Gf~~V~~L 206 (257)
T PRK05320 173 LAGKTVVSF---CTGGIRCEKAAIHMQEVGIDNVYQL 206 (257)
T ss_pred cCCCeEEEE---CCCCHHHHHHHHHHHHcCCcceEEe
Confidence 478999988 8999999999999999999988743
No 181
>COG0784 CheY FOG: CheY-like receiver [Signal transduction mechanisms]
Probab=21.30 E-value=3.4e+02 Score=21.72 Aligned_cols=44 Identities=16% Similarity=0.219 Sum_probs=26.3
Q ss_pred CCCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEEEEeccCCc--hHHHHHhh
Q 015926 299 PRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPN--ASWERFKQ 351 (398)
Q Consensus 299 v~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~--~a~~~l~~ 351 (398)
..+.+|++||| .........+.|...| ..| +..-++ .+.+.+..
T Consensus 3 ~~~~~vLivdD---~~~~~~~~~~~l~~~g-~~v-----~~a~~g~~~al~~~~~ 48 (130)
T COG0784 3 LSGLRVLVVDD---EPVNRRLLKRLLEDLG-YEV-----VEAADGEEEALELLRE 48 (130)
T ss_pred CCCcEEEEEcC---CHHHHHHHHHHHHHcC-CeE-----EEeCChHHHHHHHHHh
Confidence 35789999999 3334444556677777 222 223334 56777765
No 182
>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain. This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.
Probab=21.23 E-value=1.1e+02 Score=24.25 Aligned_cols=33 Identities=18% Similarity=0.116 Sum_probs=25.9
Q ss_pred CCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEE
Q 015926 300 RGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAY 335 (398)
Q Consensus 300 ~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~ 335 (398)
+++.++++++ +|.....++..|++.|...|+.+
T Consensus 60 ~~~~ivv~c~---~g~~s~~~~~~l~~~G~~~v~~l 92 (103)
T cd01447 60 EDKPFVFYCA---SGWRSALAGKTLQDMGLKPVYNI 92 (103)
T ss_pred CCCeEEEEcC---CCCcHHHHHHHHHHcChHHhEee
Confidence 4778899864 67777788899999998877643
No 183
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=21.02 E-value=2e+02 Score=23.66 Aligned_cols=83 Identities=16% Similarity=0.099 Sum_probs=49.0
Q ss_pred CCcEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHccc
Q 015926 85 MKKVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPK 164 (398)
Q Consensus 85 ~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~ 164 (398)
.+.+.+|+...+..+|...+..|. .++. .....++.+... -. ...+...|++|+-|..... .+++-+++.+++
T Consensus 13 ~~~i~i~g~g~s~~~a~~~~~~l~--~~~~-~~~~~~~~~~~~-~~-~~~~~~~~~~i~iS~~g~~--~~~~~~~~~a~~ 85 (139)
T cd05013 13 ARRIYIFGVGSSGLVAEYLAYKLL--RLGK-PVVLLSDPHLQL-MS-AANLTPGDVVIAISFSGET--KETVEAAEIAKE 85 (139)
T ss_pred CCEEEEEEcCchHHHHHHHHHHHH--HcCC-ceEEecCHHHHH-HH-HHcCCCCCEEEEEeCCCCC--HHHHHHHHHHHH
Confidence 366888888888899999988873 3433 333455553211 11 1233446788877765432 234555677888
Q ss_pred cCccceEEeec
Q 015926 165 LFVSSFTLVLP 175 (398)
Q Consensus 165 ~gA~~ItaViP 175 (398)
.|++ +.++..
T Consensus 86 ~g~~-iv~iT~ 95 (139)
T cd05013 86 RGAK-VIAITD 95 (139)
T ss_pred cCCe-EEEEcC
Confidence 8864 444443
No 184
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=20.98 E-value=2.1e+02 Score=23.91 Aligned_cols=81 Identities=10% Similarity=-0.077 Sum_probs=44.2
Q ss_pred EEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHccccCc
Q 015926 88 VCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLFV 167 (398)
Q Consensus 88 ~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~gA 167 (398)
+.++..-++...|......+ .++......-+.+.|..- .. ...+...|++|+=|.+.. --|++-.++.+|+.|+
T Consensus 2 I~i~G~G~S~~~A~~~~~~l--~~~~~~~~~~~~~~~~~~-~~-~~~~~~~dl~I~iS~SG~--t~~~~~~~~~a~~~g~ 75 (120)
T cd05710 2 VFFVGCGGSLADMYPAKYFL--KKESKLPVFVYNAAEFLH-TG-PKRLTEKSVVILASHSGN--TKETVAAAKFAKEKGA 75 (120)
T ss_pred EEEEEecHHHHHHhHHHHHH--HHhcCCceEEEcHHHHhh-cC-cccCCCCcEEEEEeCCCC--ChHHHHHHHHHHHcCC
Confidence 44555555655666665554 233344445566654221 11 124555788888776543 2345556777888886
Q ss_pred cceEEeec
Q 015926 168 SSFTLVLP 175 (398)
Q Consensus 168 ~~ItaViP 175 (398)
+ +.++..
T Consensus 76 ~-vi~iT~ 82 (120)
T cd05710 76 T-VIGLTD 82 (120)
T ss_pred e-EEEEEC
Confidence 4 444443
No 185
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=20.78 E-value=4.5e+02 Score=28.15 Aligned_cols=154 Identities=14% Similarity=0.161 Sum_probs=82.6
Q ss_pred eeEeecCCCCccccCCCcc---c--eeeccccccccCCCcEEEEeCCCCHHHHHHHHHHhCCCceee-e-----EEEee-
Q 015926 53 SIDFKSGSEPIHLIQNSTS---T--AATSASESASRTMKKVCLFYCPETHSLAERVAAQSDAIELRS-I-----NWRKF- 120 (398)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~lfsg~s~~~LA~~Ia~~l~~~~l~~-~-----~~~~F- 120 (398)
..||.----|+|.+++-+. . |--.=++-.+. .-++.+=.-.++...|-..|+.+ |+|+.. . .-+.|
T Consensus 247 ~fEyVYFARPDS~Idg~sVy~~R~~mG~~La~e~~~-eaDvVipVPDSg~~aAig~A~~s-GiPy~~GliKNrYvgRTFI 324 (470)
T COG0034 247 SFEYVYFARPDSVIDGISVYEARKRMGEKLAEEIPV-EADVVIPVPDSGRPAAIGYARAS-GIPYEEGLIKNRYVGRTFI 324 (470)
T ss_pred eEEEEEeecCccccCCeeHHHHHHHHHHHHHHhCCc-cccEEEecCCCChHHHHHHHHHh-CCchhhccccccccceeee
Confidence 4566666677777775532 1 11111111111 12566666677888999999998 687743 2 22233
Q ss_pred -CCC---ceeEEec---CCCCCCCceEEEEE-ecCCChhHHHHHHHHHHccccCccceEEeec--------cCCCCCccc
Q 015926 121 -KDG---FPNLFIP---NAHGIRGQHVAFLA-SFSSPGKIFEQLSVIYALPKLFVSSFTLVLP--------FFPTGTSER 184 (398)
Q Consensus 121 -pDG---E~~v~i~---~~~~VrG~dV~ivq-s~~~pd~lmELll~i~alr~~gA~~ItaViP--------Y~~YsRQDr 184 (398)
|.. |.-|+.+ +.+.++||.|++|- |+.+-. . .--+++.+|++||+.|.+-+- |++---+++
T Consensus 325 ~P~q~~R~~~Vr~KLnpvr~~v~GKrVvlVDDSIVRGT-T--sr~IV~mlReAGAkEVHvriasP~i~~Pc~YGID~pt~ 401 (470)
T COG0034 325 MPTQELREKGVRLKLNPVREVVKGKRVVLVDDSIVRGT-T--SRRIVQMLREAGAKEVHVRIASPPIRYPCFYGIDMPTR 401 (470)
T ss_pred CCcHHHHHhhhhhhcCchHHHhCCCeEEEEccccccCc-c--HHHHHHHHHHhCCCEEEEEecCCCccCCCccccCCCCH
Confidence 222 2223332 34668899999984 332221 1 123456689999999977542 333322222
Q ss_pred cc--cCCCcchHHHHHHHHHcCCCCCCCCCEEEEEcCCc
Q 015926 185 ME--DEGDVATAFTLARILSNIPTSRGGPTSLVTFDIHA 221 (398)
Q Consensus 185 ~~--~~ge~isak~lA~lL~~~~~~~aG~D~IItVDLHs 221 (398)
.. ..+ -+...+++.+ |+|.+...++-.
T Consensus 402 ~eLIA~~--~~~eeI~~~I--------gaDSL~yLsleg 430 (470)
T COG0034 402 EELIAAN--RTVEEIRKAI--------GADSLAYLSLEG 430 (470)
T ss_pred HHHhhCC--CCHHHHHHHh--------CCCceeeecHHH
Confidence 21 111 0133444444 688988888764
No 186
>PRK13810 orotate phosphoribosyltransferase; Provisional
Probab=20.68 E-value=4.9e+02 Score=24.09 Aligned_cols=79 Identities=14% Similarity=0.119 Sum_probs=47.2
Q ss_pred CCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCC-hhHHHHHHHHHHccccCccceE
Q 015926 93 CPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSP-GKIFEQLSVIYALPKLFVSSFT 171 (398)
Q Consensus 93 g~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~p-d~lmELll~i~alr~~gA~~It 171 (398)
-...-.||..+|..+ |+++..+.-..=.-|+...... .-.+|+.|+||-..-.- ..+.+ +++.++++|+ .+.
T Consensus 81 ~~~GiplA~~vA~~l-~~p~v~vRK~~k~~g~~~~~~g--~~~~g~rVlIVDDVitTGgS~~~---~i~~l~~~Ga-~V~ 153 (187)
T PRK13810 81 ELGGVPLATAVSLET-GLPLLIVRKSVKDYGTGSRFVG--DLKPEDRIVMLEDVTTSGGSVRE---AIEVVREAGA-YIK 153 (187)
T ss_pred ccchHHHHHHHHHHh-CCCEEEEecCCCccCCCceEEc--cCCCcCEEEEEEeccCCChHHHH---HHHHHHHCCC-EEE
Confidence 344668999999999 5887654333223344444322 23479999999876554 23434 4667777786 344
Q ss_pred EeeccCC
Q 015926 172 LVLPFFP 178 (398)
Q Consensus 172 aViPY~~ 178 (398)
.++-.+.
T Consensus 154 ~v~vlvd 160 (187)
T PRK13810 154 YVITVVD 160 (187)
T ss_pred EEEEEEE
Confidence 4444443
No 187
>TIGR00393 kpsF KpsF/GutQ family protein. This model describes a number of closely related proteins with the phosphosugar-binding domain SIS (Sugar ISomerase) followed by two copies of the CBS (named after Cystathionine Beta Synthase) domain. One is GutQ, a protein of the glucitol operon. Another is KpsF, a virulence factor involved in capsular polysialic acid biosynthesis in some pathogenic strains of E. coli.
Probab=20.60 E-value=2.9e+02 Score=26.19 Aligned_cols=79 Identities=13% Similarity=0.090 Sum_probs=48.5
Q ss_pred cEEEEeCCCCHHHHHHHHHHhCCCceeeeEEEeeCCCceeEEecCCCCCCCceEEEEEecCCChhHHHHHHHHHHccccC
Q 015926 87 KVCLFYCPETHSLAERVAAQSDAIELRSINWRKFKDGFPNLFIPNAHGIRGQHVAFLASFSSPGKIFEQLSVIYALPKLF 166 (398)
Q Consensus 87 ~~~lfsg~s~~~LA~~Ia~~l~~~~l~~~~~~~FpDGE~~v~i~~~~~VrG~dV~ivqs~~~pd~lmELll~i~alr~~g 166 (398)
++.+|...++..+|+..+.+|. .++.. ..-+.|.+... .....+...|++|+-|.+.. --|++-++..+|+.|
T Consensus 2 rI~i~G~G~S~~~a~~~~~~l~--~~g~~-~~~~~~~~~~~--~~~~~~~~~d~~i~iS~sG~--t~~~~~~~~~a~~~g 74 (268)
T TIGR00393 2 KLVIVGIGKSGLIGKKIVATFA--STGTP-SFFLHPTEAMH--GDLGMVEPNDVVLMISYSGE--SLELLNLIPHLKRLS 74 (268)
T ss_pred cEEEEecChHHHHHHHHHHHHH--hcCCc-eEEeCHhHHhh--cccCCCCCCCEEEEEeCCCC--CHHHHHHHHHHHHcC
Confidence 4677777778888999888772 33322 22245544221 11235666899998887653 234566677888888
Q ss_pred ccceEE
Q 015926 167 VSSFTL 172 (398)
Q Consensus 167 A~~Ita 172 (398)
++-|.+
T Consensus 75 ~~ii~i 80 (268)
T TIGR00393 75 HKIIAF 80 (268)
T ss_pred CcEEEE
Confidence 765444
No 188
>PLN02160 thiosulfate sulfurtransferase
Probab=20.50 E-value=1.5e+02 Score=25.70 Aligned_cols=33 Identities=24% Similarity=0.316 Sum_probs=27.4
Q ss_pred CCCEEEEEeccccchHhHHHHHHHHHHcCCCEEEEE
Q 015926 300 RGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAY 335 (398)
Q Consensus 300 ~gk~viIVDDii~TG~Tl~~aa~~Lk~~GA~~V~~~ 335 (398)
++++++++ |.+|.+-..+++.|++.|...|+.+
T Consensus 80 ~~~~Iivy---C~sG~RS~~Aa~~L~~~G~~~v~~l 112 (136)
T PLN02160 80 PADDILVG---CQSGARSLKATTELVAAGYKKVRNK 112 (136)
T ss_pred CCCcEEEE---CCCcHHHHHHHHHHHHcCCCCeeec
Confidence 46677776 7899999999999999999888654
No 189
>PF02225 PA: PA domain; InterPro: IPR003137 The PA (Protease associated) domain is found as an insert domain in diverse proteases, which include the MEROPS peptidase families A22B, M28, and S8A []. The PA domain is also found in a plant vacuolar sorting receptor O22925 from SWISSPROT and members of the RZF family, e.g. O43567 from SWISSPROT.; PDB: 3EIF_A 1XF1_B 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A ....
Probab=20.36 E-value=2.2e+02 Score=22.50 Aligned_cols=36 Identities=17% Similarity=0.357 Sum_probs=26.8
Q ss_pred eCCCCCCEEEEEeccccchH-hHHHHHHHHHHcCCCEEEEEE
Q 015926 296 EGDPRGRHIVIVDDLVQSGG-TLIECQKVLAAHGAAKISAYV 336 (398)
Q Consensus 296 ~g~v~gk~viIVDDii~TG~-Tl~~aa~~Lk~~GA~~V~~~~ 336 (398)
..+++||.|++ ..|. ++..-++..+++||.-|.++-
T Consensus 29 ~~~~~gkIvlv-----~rg~~~~~~k~~~a~~~GA~gvIi~~ 65 (101)
T PF02225_consen 29 GSDVKGKIVLV-----ERGSCSFDDKVRNAQKAGAKGVIIYN 65 (101)
T ss_dssp TSTCTTSEEEE-----ESTSSCHHHHHHHHHHTTESEEEEE-
T ss_pred CccccceEEEE-----ecCCCCHHHHHHHHHHcCCEEEEEEe
Confidence 34789988877 3332 778888889999999887764
No 190
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=20.05 E-value=3.3e+02 Score=24.70 Aligned_cols=60 Identities=18% Similarity=0.165 Sum_probs=38.1
Q ss_pred CCEEEEEeccccch-HhHHHHHHHHHHcCCCEEEEEEEeccCCchHHHHHhhcCCCCCCCCccEEEEccC
Q 015926 301 GRHIVIVDDLVQSG-GTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDS 369 (398)
Q Consensus 301 gk~viIVDDii~TG-~Tl~~aa~~Lk~~GA~~V~~~~TH~~~s~~a~~~l~~~~~~~~~~~~~~iv~tdt 369 (398)
++.+||++|.-+.+ ..+.++++.+++.|. +|+++...+- -..+++|.+.. |=....+.|.
T Consensus 108 ~~iiil~sd~~~~~~~~~~~~~~~l~~~~I-~v~~IgiG~~--~~~L~~ia~~t------gG~~~~~~~~ 168 (183)
T cd01453 108 REVLIIFSSLSTCDPGNIYETIDKLKKENI-RVSVIGLSAE--MHICKEICKAT------NGTYKVILDE 168 (183)
T ss_pred eEEEEEEcCCCcCChhhHHHHHHHHHHcCc-EEEEEEechH--HHHHHHHHHHh------CCeeEeeCCH
Confidence 44677778865443 356678899999885 5777764321 14578888763 3356666663
Done!