Query 015927
Match_columns 398
No_of_seqs 136 out of 1278
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 04:57:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015927.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015927hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1l_A Arginine/agmatine antip 99.7 5E-14 1.7E-18 137.3 31.7 244 36-300 5-252 (445)
2 3gia_A Uncharacterized protein 99.5 3.1E-11 1.1E-15 117.4 31.5 241 36-299 3-248 (444)
3 4djk_A Probable glutamate/gamm 99.2 1E-08 3.5E-13 101.4 28.6 245 36-300 8-262 (511)
4 2jln_A MHP1; hydantoin, transp 98.0 0.00048 1.7E-08 67.5 19.8 107 38-145 24-131 (501)
5 3dh4_A Sodium/glucose cotransp 97.3 0.15 5E-06 50.2 30.9 89 36-125 17-106 (530)
6 2xq2_A Sodium/glucose cotransp 96.0 1.4 4.8E-05 43.8 30.1 87 38-125 48-135 (593)
7 2a65_A Leutaa, Na(+):neurotran 93.6 5.7 0.0002 38.6 29.1 35 37-71 5-40 (519)
8 3l1l_A Arginine/agmatine antip 62.7 63 0.0022 30.0 11.4 48 100-147 258-305 (445)
9 4djk_A Probable glutamate/gamm 44.1 2.1E+02 0.0072 26.9 12.8 33 114-146 287-319 (511)
10 3gia_A Uncharacterized protein 38.9 1E+02 0.0034 28.6 8.5 45 102-146 258-302 (444)
11 2wsw_A BCCT family betaine/car 37.9 1.5E+02 0.0051 28.5 9.3 25 38-62 88-112 (509)
12 4ain_A Glycine betaine transpo 25.9 1.6E+02 0.0054 28.5 7.2 25 38-62 93-117 (539)
No 1
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=99.69 E-value=5e-14 Score=137.29 Aligned_cols=244 Identities=14% Similarity=0.107 Sum_probs=161.7
Q ss_pred cCCCCCcHHHHHHHHHHHHHhhhhhhHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCHHHHHHHHcCh
Q 015927 36 AGIDGASFSGAVFNLSTTIVGAGIMALPATVKELGLIPGLIMIVLVGWLTESSIDMIMRFSRASKS-ATYSGVVADAFGG 114 (398)
Q Consensus 36 ~~~~~~s~~~~~~~l~~~~iG~GiL~lP~~~~~~G~~~g~~~l~~~~~l~~~t~~~l~~~~~~~~~-~~y~~l~~~~~G~ 114 (398)
+++|+.+.++.+...+++++|+|++.+|....+.|.. +++..++.++........+.|...+.+. -...+..++.+||
T Consensus 5 ~~~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~-~~~~~li~~~~~~~~a~~~~el~~~~p~~Gg~y~~~~~~~G~ 83 (445)
T 3l1l_A 5 ADAHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGI-AIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGP 83 (445)
T ss_dssp --CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTHHHHHHHHSCH
T ss_pred CCCCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHccCCCCCCchhhHHhHcCC
Confidence 4578899999999999999999999999998888864 7888888888888888888888877644 4888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCccCCCcchhhhccccccchhHHHHHHHHHHhhccccccccchhh
Q 015927 115 AGRALLQVCIVVNNLGMLVVYMIIIGDVLSGAWLNGVHHSGVTEEWFGQHWWTTRFTLLLLTTLFVFLPLISFRRVDSLR 194 (398)
Q Consensus 115 ~~~~i~~~~~~~~~~g~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~l~~l~ 194 (398)
+...+......+........+....++.+...+++ . +.++ ....+. ....++.-....+..+...
T Consensus 84 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~---~~~~~~-~~~~~~~~~in~~g~~~~~ 148 (445)
T 3l1l_A 84 FLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPI----------L-KDPW---VLTITC-VVVLWIFVLLNIVGPKMIT 148 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGG----------G-GSHH---HHHHHH-HHHHHHHHHHHHHCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc----------c-cccH---HHHHHH-HHHHHHHHHHHHhchHHHH
Confidence 99999999888887777777777777777544331 0 0000 111111 1111222222233444444
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccc--cchhhhhhhhhhhhhhhhhhcccchhHHHhhcCCcc-c
Q 015927 195 YTSALSVGLAIVFVVITAGVAIVKTIDGSISMPCLLPEIS--KQASFWKLFTTFPVLVTAYICHHNIHPIENELKDPT-Q 271 (398)
Q Consensus 195 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m~~~~-~ 271 (398)
.+..+.....++..++ +........+ .....+.++ +..++.++..++....|+|.+........+|+|||+ +
T Consensus 149 ~~~~~~~~~~i~~~~~---~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ 223 (445)
T 3l1l_A 149 RVQAVATVLALIPIVG---IAVFGWFWFR--GETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRN 223 (445)
T ss_dssp HHHHHHHHHHHHHHHH---HHHTTSTTCC--CCCCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHH
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHhC--hhhcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCcccc
Confidence 4444333221111111 1111111111 111111111 122356788899999999999999999999999996 7
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 015927 272 IKSIVRTSITLCSTVYITTSFFGLLLFGD 300 (398)
Q Consensus 272 ~~~~~~~~~~~~~~~Y~~~g~~gy~~fg~ 300 (398)
.+|++..+.....++|+..........+.
T Consensus 224 ip~a~~~~~~~~~~~y~~~~~~~~~~~~~ 252 (445)
T 3l1l_A 224 VPIATIGGVLIAAVCYVLSTTAIMGMIPN 252 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 89999999999999999998877766653
No 2
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=99.51 E-value=3.1e-11 Score=117.44 Aligned_cols=241 Identities=11% Similarity=0.123 Sum_probs=152.1
Q ss_pred cCCCCCcHHHHHHHHHHHHHhhhhhhHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCHHHHHHHHcC
Q 015927 36 AGIDGASFSGAVFNLSTTIVGAGIMALPAT-VKELGLIPGLIMIVLVGWLTESSIDMIMRFSRASK-SATYSGVVADAFG 113 (398)
Q Consensus 36 ~~~~~~s~~~~~~~l~~~~iG~GiL~lP~~-~~~~G~~~g~~~l~~~~~l~~~t~~~l~~~~~~~~-~~~y~~l~~~~~G 113 (398)
+++|+.+.++.....+++++|+|++..|.. .+.+|. ..++..++.+++...+...+.|...+.+ .....+..++.+|
T Consensus 3 ~~~r~l~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~-~~~~~~li~~~~~~~~~~~~~el~~~~P~~Gg~y~~~~~~~G 81 (444)
T 3gia_A 3 LKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGR-NLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIG 81 (444)
T ss_dssp CCCCCBCHHHHHHHHHHHHHHHHTTTSHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHC
T ss_pred ccCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHhHHHHhC
Confidence 357889999999999999999999998754 445565 6788888888888888899999887764 4568899999999
Q ss_pred hh--HHHHHHHHHHHHHHHHHHHHHHhhccccccccccCccCCCcchhhhccccccchhHHHHHHHHHHhhccccccccc
Q 015927 114 GA--GRALLQVCIVVNNLGMLVVYMIIIGDVLSGAWLNGVHHSGVTEEWFGQHWWTTRFTLLLLTTLFVFLPLISFRRVD 191 (398)
Q Consensus 114 ~~--~~~i~~~~~~~~~~g~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~l~ 191 (398)
|+ +.++ .....+........+....++.+...++.. ++++ .... ......++.-....+..+
T Consensus 82 ~~~~~g~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-----------~~~~---~~~~-~~~~~~~~~~~in~~g~~ 145 (444)
T 3gia_A 82 DNIITGAL-SILLWMSYVISIALFAKGFAGYFLPLINAP-----------INTF---NIAI-TEIGIVAFFTALNFFGSK 145 (444)
T ss_dssp SSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-----------CCHH---HHHH-HHHHHHHHHHHHHHHTHH
T ss_pred cchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------CchH---HHHH-HHHHHHHHHHHHHHHhHH
Confidence 96 3333 344444445555666666666664333210 0000 0111 111111222222333444
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccccchhhhhhhhhhhhhhhhhhcccchhHHHhhcCCcc-
Q 015927 192 SLRYTSALSVGLAIVFVVITAGVAIVKTIDGSISMPCLLPEISKQASFWKLFTTFPVLVTAYICHHNIHPIENELKDPT- 270 (398)
Q Consensus 192 ~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m~~~~- 270 (398)
....+..+...+-+...++.+....... + ..+..|... ..++.+++.++....++|.+...+....+|+|||+
T Consensus 146 ~~~~~~~~~~~~~i~~~~~~ii~~~~~~-~----~~~~~~~~~-~~g~~~~~~~~~~~~~a~~G~e~~~~~~~e~k~P~r 219 (444)
T 3gia_A 146 AVGRAEFFIVLVKLLILGLFIFAGLITI-H----PSYVIPDLA-PSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKK 219 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC-C----GGGTSCCCS-HHHHHHHHHHHHHGGGGGTHHHHHHTTGGGBSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc-C----hhhcCCCCC-CcchHHHHHHHHHHHHHHHhHHHHHHHHHHccCccc
Confidence 4444444333222222221111122221 1 111222111 13455788889999999999999999999999998
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 015927 271 QIKSIVRTSITLCSTVYITTSFFGLLLFG 299 (398)
Q Consensus 271 ~~~~~~~~~~~~~~~~Y~~~g~~gy~~fg 299 (398)
+.+|++..+.....++|....+......+
T Consensus 220 ~ip~ai~~~~~~~~~~y~~~~~~~~~~~~ 248 (444)
T 3gia_A 220 NVPRAIFISILIVMFVYVGVAISAIGNLP 248 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 59999999999999999998877665554
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=99.22 E-value=1e-08 Score=101.42 Aligned_cols=245 Identities=11% Similarity=0.050 Sum_probs=135.4
Q ss_pred cCCCCCcHHHHHHHHHHHHHhhhhhhHHHHHHHhCHHHHHHHHHHHHHHHH-HHHHHHHHHHh--hcCCCCHHHHHHHHc
Q 015927 36 AGIDGASFSGAVFNLSTTIVGAGIMALPATVKELGLIPGLIMIVLVGWLTE-SSIDMIMRFSR--ASKSATYSGVVADAF 112 (398)
Q Consensus 36 ~~~~~~s~~~~~~~l~~~~iG~GiL~lP~~~~~~G~~~g~~~l~~~~~l~~-~t~~~l~~~~~--~~~~~~y~~l~~~~~ 112 (398)
+.+|+.+.++.+...++.++| +..+|. ....|.. .++..++.+++.. .+...+.|... +.+.-.....+++.+
T Consensus 8 ~~~r~l~~~~~~~l~~~~~ig--~~~~~~-~~~~G~~-~~~~~~i~~~~~~l~~al~~ael~s~~~~P~GG~y~~~~~~~ 83 (511)
T 4djk_A 8 GKAKQLTLLGFFAITASMVMA--VYEYPT-FATSGFS-LVFFLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTL 83 (511)
T ss_dssp ----CCCHHHHHHHTGGGGCC--GGGHHH-HHTTTTH-HHHHHHHHHHHTHHHHHHHHHHHHTTSCC---CHHHHHHHHH
T ss_pred ccCccccHHHHHHHHHHHHHh--hchhHH-HHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHcccccCCCCChhhhHHhhc
Confidence 457889999999999999986 567775 4566653 3333333333332 36667777766 544668888999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCccCCCcchhhhccccccchhHHHHHHHHHHhhccccccccch
Q 015927 113 GGAGRALLQVCIVVNNLGMLVVYMIIIGDVLSGAWLNGVHHSGVTEEWFGQHWWTTRFTLLLLTTLFVFLPLISFRRVDS 192 (398)
Q Consensus 113 G~~~~~i~~~~~~~~~~g~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~l~~ 192 (398)
||+.+.+......+........+....++.+...+.. +.. ....+. ...+.+ ..+++.-....+..+.
T Consensus 84 g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------p~~-~~~~~~--~~~~~~-~~~~~~~~in~~g~~~ 151 (511)
T 4djk_A 84 GPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKW--------PAL-NEDPIT--KTIAAL-IILWALALTQFGGTKY 151 (511)
T ss_dssp CHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTTTC--------GGG-TSCSSH--HHHHHH-HHHHHHHHHHHTCSSS
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------ccc-ccCcHH--HHHHHH-HHHHHHHHHHHhChHH
Confidence 9999988887777776655555555555544322100 111 111111 111111 1112222222233344
Q ss_pred hhhhhHHHHHHHHH-HHHHHHHHHHHHhhcCCC-----CCCccccccccchhhhhhhhhhhhhhhhhhcccchhHHHhhc
Q 015927 193 LRYTSALSVGLAIV-FVVITAGVAIVKTIDGSI-----SMPCLLPEISKQASFWKLFTTFPVLVTAYICHHNIHPIENEL 266 (398)
Q Consensus 193 l~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~p~~~~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m 266 (398)
...+..+...+.++ .+++.+.........++. +.....|+.. ..+...++....++|.|........+|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~G~e~~~~~a~E~ 227 (511)
T 4djk_A 152 TARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFS----KVGTLVVFVAFILSYMGVEASATHVNEM 227 (511)
T ss_dssp HHHHTHHHHHHTTHHHHHHHHHHHHHHTC------------CCCCCTT----STTTTTTHHHHHHHHTTGGGGTGGGSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCcc----cchHHHHHHHHHHHHhhHHHHHHHHHhc
Confidence 44443332211111 111111111222212211 0111112111 1233456778899999999999999999
Q ss_pred CCcc-chhHHHHHHHHHHHHHHHHHHhHHhhhcCC
Q 015927 267 KDPT-QIKSIVRTSITLCSTVYITTSFFGLLLFGD 300 (398)
Q Consensus 267 ~~~~-~~~~~~~~~~~~~~~~Y~~~g~~gy~~fg~ 300 (398)
|||+ +.+|++..+..+..++|++..+......++
T Consensus 228 k~P~k~ip~ai~~~~~~~~~~y~~~~~~~~~~~~~ 262 (511)
T 4djk_A 228 SNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPG 262 (511)
T ss_dssp SCCTTTHHHHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred cCcccchhHHHHHHHHHHHHHHHHHHHHHHeecCH
Confidence 9998 699999999999999999998877766654
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=98.00 E-value=0.00048 Score=67.52 Aligned_cols=107 Identities=7% Similarity=-0.085 Sum_probs=77.2
Q ss_pred CCCCcHHHHHHHHHHHHHhhhhhhHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHcChhH
Q 015927 38 IDGASFSGAVFNLSTTIVGAGIMALPATVKE-LGLIPGLIMIVLVGWLTESSIDMIMRFSRASKSATYSGVVADAFGGAG 116 (398)
Q Consensus 38 ~~~~s~~~~~~~l~~~~iG~GiL~lP~~~~~-~G~~~g~~~l~~~~~l~~~t~~~l~~~~~~~~~~~y~~l~~~~~G~~~ 116 (398)
+|+.+.++-+..-++..++.+.+.+...+.. .++..+++.+++..++...-..+......+++.. +..+.|..||+++
T Consensus 24 ~R~~~~~~~~~~W~g~~~~i~~~~~Ga~~~~GLs~~~a~lai~lG~li~~~~~~l~~~~G~~~Gl~-~~v~~R~~FG~~G 102 (501)
T 2jln_A 24 ERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIRWGIN-FTVAARMPFGIRG 102 (501)
T ss_dssp GCCBCHHHHHHHHHHHHCSTHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCCC-HHHHTTTTSCTTT
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCCC-hhhhhHhhcchhH
Confidence 3456777777777777777776666544443 3466677766666666665556666666676555 9999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 015927 117 RALLQVCIVVNNLGMLVVYMIIIGDVLSG 145 (398)
Q Consensus 117 ~~i~~~~~~~~~~g~~~~y~~~~~~~l~~ 145 (398)
..+..+...+...|-........++.+..
T Consensus 103 s~i~~ll~~i~~igw~~v~~~~gg~al~~ 131 (501)
T 2jln_A 103 SLIPITLKALLSLFWFGFQTWLGALALDE 131 (501)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888877777777776643
No 5
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=97.32 E-value=0.15 Score=50.17 Aligned_cols=89 Identities=10% Similarity=0.025 Sum_probs=59.2
Q ss_pred cCCCCCcHHHHHHHHHHHHHhh-hhhhHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHcCh
Q 015927 36 AGIDGASFSGAVFNLSTTIVGA-GIMALPATVKELGLIPGLIMIVLVGWLTESSIDMIMRFSRASKSATYSGVVADAFGG 114 (398)
Q Consensus 36 ~~~~~~s~~~~~~~l~~~~iG~-GiL~lP~~~~~~G~~~g~~~l~~~~~l~~~t~~~l~~~~~~~~~~~y~~l~~~~~G~ 114 (398)
-..|+.+++...+.+..+.+++ .++++|-.....|+........ .++........+....++.+..|..|.-++-||+
T Consensus 17 laGR~l~~~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~~-~~~~~~i~~~~~~p~~~~~~~~T~~e~l~~Rfg~ 95 (530)
T 3dh4_A 17 XAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWM-SAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNK 95 (530)
T ss_dssp CCCSCCCHHHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHHH-HHHHHHHHHHHTHHHHHHTTCCSHHHHHHHHTCH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCccHHHHHHHHcCc
Confidence 3457888888888888777765 4667898888888653211111 1111112233444455677899999999999999
Q ss_pred hHHHHHHHHHH
Q 015927 115 AGRALLQVCIV 125 (398)
Q Consensus 115 ~~~~i~~~~~~ 125 (398)
+.+.+..+...
T Consensus 96 ~~~~~~a~~~l 106 (530)
T 3dh4_A 96 KLKTILAVFWI 106 (530)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 98887766544
No 6
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=96.01 E-value=1.4 Score=43.80 Aligned_cols=87 Identities=10% Similarity=0.026 Sum_probs=54.4
Q ss_pred CCCCcHHHHHHHHHHHHHhhh-hhhHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHcChhH
Q 015927 38 IDGASFSGAVFNLSTTIVGAG-IMALPATVKELGLIPGLIMIVLVGWLTESSIDMIMRFSRASKSATYSGVVADAFGGAG 116 (398)
Q Consensus 38 ~~~~s~~~~~~~l~~~~iG~G-iL~lP~~~~~~G~~~g~~~l~~~~~l~~~t~~~l~~~~~~~~~~~y~~l~~~~~G~~~ 116 (398)
.|+.+++.....+..+.+++. .++.|-...+.|+........ ..+........+..-.+|.+..|..|.-++-||++.
T Consensus 48 GR~l~~~~~~~Sl~at~~sa~t~lG~~g~~y~~G~~~~~~~~~-~~~~~~~~~~~~~p~~~r~~~~T~~e~l~~Rfg~~~ 126 (593)
T 2xq2_A 48 GKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWM-SAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKL 126 (593)
T ss_dssp ---CCHHHHHHHHHGGGSSHHHHHHHHHHHHHTCGGGGHHHHH-HHHHHHHHHHTHHHHHHHTTCCSHHHHHHHHTCHHH
T ss_pred CCCCCHHHHHHHHHHHHhcHHHHhhHhHHHHHcCHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHccCch
Confidence 467788888888877666554 567888888888642211111 111111223334444567789999999999999998
Q ss_pred HHHHHHHHH
Q 015927 117 RALLQVCIV 125 (398)
Q Consensus 117 ~~i~~~~~~ 125 (398)
+.+..+...
T Consensus 127 ~~~~ai~~l 135 (593)
T 2xq2_A 127 KTILAVFWI 135 (593)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 877765544
No 7
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=93.58 E-value=5.7 Score=38.56 Aligned_cols=35 Identities=23% Similarity=0.333 Sum_probs=29.4
Q ss_pred CCCCCcHHHHHHHHHHHHHhhh-hhhHHHHHHHhCH
Q 015927 37 GIDGASFSGAVFNLSTTIVGAG-IMALPATVKELGL 71 (398)
Q Consensus 37 ~~~~~s~~~~~~~l~~~~iG~G-iL~lP~~~~~~G~ 71 (398)
+++=.|..+-++..+++.+|.| +.-.||...+-|-
T Consensus 5 R~~W~sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGG 40 (519)
T 2a65_A 5 REHWATRLGLILAMAGNAVGLGNFLRFPVQAAENGG 40 (519)
T ss_dssp CCCCSCHHHHHHHHHHHHSSHHHHTHHHHHHHHTTT
T ss_pred cccCCcHHHHHHHHHHHHhcccHHHHHHHHHHHcCC
Confidence 4455678888999999999999 7789999998873
No 8
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=62.73 E-value=63 Score=30.00 Aligned_cols=48 Identities=19% Similarity=0.371 Sum_probs=39.4
Q ss_pred CCCCHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 015927 100 KSATYSGVVADAFGGAGRALLQVCIVVNNLGMLVVYMIIIGDVLSGAW 147 (398)
Q Consensus 100 ~~~~y~~l~~~~~G~~~~~i~~~~~~~~~~g~~~~y~~~~~~~l~~~~ 147 (398)
......++.+..+|+++..++.+...+..+++...+....+..+....
T Consensus 258 ~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a 305 (445)
T 3l1l_A 258 SASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAA 305 (445)
T ss_dssp TTCTHHHHHHHHHCTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999988888877777665443
No 9
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=44.13 E-value=2.1e+02 Score=26.93 Aligned_cols=33 Identities=3% Similarity=0.022 Sum_probs=22.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 015927 114 GAGRALLQVCIVVNNLGMLVVYMIIIGDVLSGA 146 (398)
Q Consensus 114 ~~~~~i~~~~~~~~~~g~~~~y~~~~~~~l~~~ 146 (398)
++...+..+...+..++....+....+..+...
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~sR~l~a~ 319 (511)
T 4djk_A 287 EWTVRVISALLLLGVLAEIASWIVGPSRGMYVT 319 (511)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTHHHHHTCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556777888777777777777666666655443
No 10
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=38.92 E-value=1e+02 Score=28.58 Aligned_cols=45 Identities=9% Similarity=0.029 Sum_probs=34.0
Q ss_pred CCHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 015927 102 ATYSGVVADAFGGAGRALLQVCIVVNNLGMLVVYMIIIGDVLSGA 146 (398)
Q Consensus 102 ~~y~~l~~~~~G~~~~~i~~~~~~~~~~g~~~~y~~~~~~~l~~~ 146 (398)
....+..+..+|+++..++.+...+..+++........+..+...
T Consensus 258 ~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a~ 302 (444)
T 3gia_A 258 NALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSL 302 (444)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHH
T ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888889999888888888888888877776655555433
No 11
>2wsw_A BCCT family betaine/carnitine/choline transporter; transport protein, SD methionine, membrane protein; HET: CM5 1PE; 2.29A {Proteus mirabilis} PDB: 2wsx_A* 3hfx_A*
Probab=37.91 E-value=1.5e+02 Score=28.47 Aligned_cols=25 Identities=12% Similarity=0.097 Sum_probs=18.0
Q ss_pred CCCCcHHHHHHHHHHHHHhhhhhhH
Q 015927 38 IDGASFSGAVFNLSTTIVGAGIMAL 62 (398)
Q Consensus 38 ~~~~s~~~~~~~l~~~~iG~GiL~l 62 (398)
+.+-|.++-+.-+..+-+|+|++.-
T Consensus 88 kPefs~~sW~aMlF~aGmGiGl~fw 112 (509)
T 2wsw_A 88 KPEFSTASWIFMMFASCTSAAVLFW 112 (509)
T ss_dssp CCSSCHHHHHHHHHHHTCCHHHHHH
T ss_pred CCCCccchHHHHHHHHhhhhHHhhh
Confidence 3346667777778888888888764
No 12
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=25.86 E-value=1.6e+02 Score=28.54 Aligned_cols=25 Identities=12% Similarity=0.034 Sum_probs=19.4
Q ss_pred CCCCcHHHHHHHHHHHHHhhhhhhH
Q 015927 38 IDGASFSGAVFNLSTTIVGAGIMAL 62 (398)
Q Consensus 38 ~~~~s~~~~~~~l~~~~iG~GiL~l 62 (398)
+.+-|.++-+.-+..+-+|+|++.-
T Consensus 93 kPefS~~sW~aMlF~AGmGiGl~Fw 117 (539)
T 4ain_A 93 APEFRTVSWISMMFAAGMGIGLMFY 117 (539)
T ss_dssp CCSSCHHHHHHHHHTTSCCTHHHHH
T ss_pred CCCCcchHHHHHHHHHhhcchheee
Confidence 4456777778888899999998853
Done!