BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015931
(398 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 165/303 (54%), Gaps = 12/303 (3%)
Query: 46 SLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AF 104
L R S E+ A+ NFS +LGRG V+KG++ T VA+KRL +E + + F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERXQGGELQF 82
Query: 105 CRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPW 164
E+ + S H N++ L GFC+ P + L L+Y Y++ GS+ L E+ + L W
Sbjct: 83 QTEVEMISMAVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPES---QPPLDW 138
Query: 165 SVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVP 224
R ++ALG A +AYLH+ + ++HRD+K +NILL + + DFGLA
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX- 197
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL- 283
+ V+GT G++APEY GK S+KTDV+ +GV+LLEL+TG++ + RL +++++L
Sbjct: 198 HVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 257
Query: 284 -WAKPILHRGMAAVEELLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAIL 342
W K +L +E L+D L+ ++ C S RP + E++ +L
Sbjct: 258 DWVKGLLKE--KKLEALVDVDLQGNYKDE-EVEQLIQVALLCTQSSPMERPKMSEVVRML 314
Query: 343 RGE 345
G+
Sbjct: 315 EGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 164/305 (53%), Gaps = 16/305 (5%)
Query: 46 SLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKV--GLLRTSVAIKRLDKEDKESSK- 102
L R S E+ A+ NF +LGRG V+KG++ G L VA+KRL +E + +
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXL---VAVKRLKEERTQGGEL 72
Query: 103 AFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL 162
F E+ + S H N++ L GFC+ P + L L+Y Y++ GS+ L E+ + L
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPES---QPPL 128
Query: 163 PWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 222
W R ++ALG A +AYLH+ + ++HRD+K +NILL + + DFGLA
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 188
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLV 282
+ V+G G++APEY GK S+KTDV+ +GV+LLEL+TG++ + RL +++++
Sbjct: 189 X-HVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247
Query: 283 L--WAKPILHRGMAAVEELLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIA 340
L W K +L +E L+D L+ ++ C S RP + E++
Sbjct: 248 LLDWVKGLLKE--KKLEALVDVDLQGNYKDE-EVEQLIQVALLCTQSSPMERPKMSEVVR 304
Query: 341 ILRGE 345
+L G+
Sbjct: 305 MLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 142/263 (53%), Gaps = 24/263 (9%)
Query: 49 RLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLR--TSVAIKRLDKEDKESSKAFCR 106
R+ ++ AT+NF ++G G V+KG +LR VA+KR E + + F
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKG---VLRDGAKVALKRRTPESSQGIEEFET 84
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP--- 163
E+ S HP++V L+GFC D + LIYKY+ G+L+RHL+ S LP
Sbjct: 85 EIETLSFCRHPHLVSLIGFC-DERNEMILIYKYMENGNLKRHLY--------GSDLPTMS 135
Query: 164 --WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 221
W R ++ +G A + YLH R ++HRD+K NILL +PK+ DFG++ +
Sbjct: 136 MSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTEL 192
Query: 222 SVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENL 281
L VKGT GY+ PEYF G++++K+DVY+FGVVL E+L R I + NL
Sbjct: 193 DQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL 252
Query: 282 VLWAKPILHRGMAAVEELLDPRL 304
WA + G +E+++DP L
Sbjct: 253 AEWAVESHNNGQ--LEQIVDPNL 273
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 142/263 (53%), Gaps = 24/263 (9%)
Query: 49 RLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLR--TSVAIKRLDKEDKESSKAFCR 106
R+ ++ AT+NF ++G G V+KG +LR VA+KR E + + F
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKG---VLRDGAKVALKRRTPESSQGIEEFET 84
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP--- 163
E+ S HP++V L+GFC D + LIYKY+ G+L+RHL+ S LP
Sbjct: 85 EIETLSFCRHPHLVSLIGFC-DERNEMILIYKYMENGNLKRHLY--------GSDLPTMS 135
Query: 164 --WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 221
W R ++ +G A + YLH R ++HRD+K NILL +PK+ DFG++ +
Sbjct: 136 MSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTEL 192
Query: 222 SVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENL 281
L VKGT GY+ PEYF G++++K+DVY+FGVVL E+L R I + NL
Sbjct: 193 GQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL 252
Query: 282 VLWAKPILHRGMAAVEELLDPRL 304
WA + G +E+++DP L
Sbjct: 253 AEWAVESHNNGQ--LEQIVDPNL 273
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 156/304 (51%), Gaps = 26/304 (8%)
Query: 50 LSYGEILAATHNFSK------GRVLGRGALSFVFKGKVGLLRTSVAIKRL----DKEDKE 99
S+ E+ T+NF + G +G G V+KG V T+VA+K+L D +E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEE 72
Query: 100 SSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGN 159
+ F +E+ + + H N+V L+GF D + L L+Y Y+ GSL L + G
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDD-LCLVYVYMPNGSLLDRL----SCLDGT 127
Query: 160 STLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 219
L W +R K+A G A + +LH E +HRDIK +NILL K+ DFGLA +
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 220 APSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEE 279
+ + + GT Y+APE + G+++ K+D+Y+FGVVLLE++TG ++ R E
Sbjct: 185 KFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR---EP 240
Query: 280 NLVLWAKPILHRGMAAVEELLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEII 339
L+L K + +E+ +D ++ +S C+ ++++RP I+++
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 298
Query: 340 AILR 343
+L+
Sbjct: 299 QLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 156/304 (51%), Gaps = 26/304 (8%)
Query: 50 LSYGEILAATHNFSK------GRVLGRGALSFVFKGKVGLLRTSVAIKRL----DKEDKE 99
S+ E+ T+NF + G +G G V+KG V T+VA+K+L D +E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEE 72
Query: 100 SSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGN 159
+ F +E+ + + H N+V L+GF D + L L+Y Y+ GSL L + G
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDD-LCLVYVYMPNGSLLDRL----SCLDGT 127
Query: 160 STLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 219
L W +R K+A G A + +LH E +HRDIK +NILL K+ DFGLA +
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 220 APSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEE 279
+ + + GT Y+APE + G+++ K+D+Y+FGVVLLE++TG ++ R E
Sbjct: 185 KFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR---EP 240
Query: 280 NLVLWAKPILHRGMAAVEELLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEII 339
L+L K + +E+ +D ++ +S C+ ++++RP I+++
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 298
Query: 340 AILR 343
+L+
Sbjct: 299 QLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 156/304 (51%), Gaps = 26/304 (8%)
Query: 50 LSYGEILAATHNFSK------GRVLGRGALSFVFKGKVGLLRTSVAIKRL----DKEDKE 99
S+ E+ T+NF + G +G G V+KG V T+VA+K+L D +E
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEE 66
Query: 100 SSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGN 159
+ F +E+ + + H N+V L+GF D + L L+Y Y+ GSL L + G
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDD-LCLVYVYMPNGSLLDRL----SCLDGT 121
Query: 160 STLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 219
L W +R K+A G A + +LH E +HRDIK +NILL K+ DFGLA +
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 220 APSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEE 279
+ + + GT Y+APE + G+++ K+D+Y+FGVVLLE++TG ++ R E
Sbjct: 179 KFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR---EP 234
Query: 280 NLVLWAKPILHRGMAAVEELLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEII 339
L+L K + +E+ +D ++ +S C+ ++++RP I+++
Sbjct: 235 QLLLDIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 292
Query: 340 AILR 343
+L+
Sbjct: 293 QLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 151/304 (49%), Gaps = 26/304 (8%)
Query: 50 LSYGEILAATHNFSK------GRVLGRGALSFVFKGKVGLLRTSVAIKRL----DKEDKE 99
S+ E+ T+NF + G G G V+KG V T+VA+K+L D +E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEE 63
Query: 100 SSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGN 159
+ F +E+ + + H N+V L+GF D + L L+Y Y GSL L + G
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDD-LCLVYVYXPNGSLLDRL----SCLDGT 118
Query: 160 STLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS 219
L W R K+A G A + +LH E +HRDIK +NILL K+ DFGLA +
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 175
Query: 220 APSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEE 279
+ + GT Y APE + G+++ K+D+Y+FGVVLLE++TG ++ R E
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR---EP 231
Query: 280 NLVLWAKPILHRGMAAVEELLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEII 339
L+L K + +E+ +D K +S C+ ++++RP I+++
Sbjct: 232 QLLLDIKEEIEDEEKTIEDYIDK--KXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQ 289
Query: 340 AILR 343
+L+
Sbjct: 290 QLLQ 293
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 143/282 (50%), Gaps = 44/282 (15%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 126
V+GRGA V K K VAIK+++ E + KAF EL S ++HPNIV L G C
Sbjct: 16 VVGRGAFGVVCKAK--WRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 127 IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV---ALGIAESVAYLHN 183
++P + L+ +Y GGSL LH G LP+ L ++ VAYLH+
Sbjct: 72 LNP---VCLVMEYAEGGSLYNVLH-------GAEPLPYYTAAHAMSWCLQCSQGVAYLHS 121
Query: 184 GTERCVVHRDIKPSNILL-SSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+KP N+LL + + K+CDFG A + KG+ ++APE F
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVF 176
Query: 243 QHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGM--AAVEELL 300
+ S+K DV+++G++L E++T RKP + + G ++WA +H G ++ L
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFD--EIGGPAFRIMWA---VHNGTRPPLIKNLP 231
Query: 301 DPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAIL 342
P +R C S + S+RP +EEI+ I+
Sbjct: 232 KPIESLMTR--------------CWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 143/282 (50%), Gaps = 44/282 (15%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 126
V+GRGA V K K VAIK+++ E + KAF EL S ++HPNIV L G C
Sbjct: 15 VVGRGAFGVVCKAK--WRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 127 IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV---ALGIAESVAYLHN 183
++P + L+ +Y GGSL LH G LP+ L ++ VAYLH+
Sbjct: 71 LNP---VCLVMEYAEGGSLYNVLH-------GAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120
Query: 184 GTERCVVHRDIKPSNILL-SSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+KP N+LL + + K+CDFG A + KG+ ++APE F
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVF 175
Query: 243 QHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGM--AAVEELL 300
+ S+K DV+++G++L E++T RKP + + G ++WA +H G ++ L
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFD--EIGGPAFRIMWA---VHNGTRPPLIKNLP 230
Query: 301 DPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAIL 342
P +R C S + S+RP +EEI+ I+
Sbjct: 231 KPIESLMTR--------------CWSKDPSQRPSMEEIVKIM 258
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 107/201 (53%), Gaps = 10/201 (4%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFCRELMIASSLHHPNIVPLVGFCID 128
GA SF + + VA+K L ++D E F RE+ I L HPNIV +G
Sbjct: 46 GAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ 105
Query: 129 PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERC 188
P L ++ +Y+S GSL R LH K G R L R +A +A+ + YLHN
Sbjct: 106 PPN-LSIVTEYLSRGSLYRLLH--KSGAR--EQLDERRRLSMAYDVAKGMNYLHNRNP-P 159
Query: 189 VVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVS 248
+VHRD+K N+L+ K K+CDFGL+ + S K GT ++APE + +
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA--SXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 249 DKTDVYAFGVVLLELLTGRKP 269
+K+DVY+FGV+L EL T ++P
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 108/201 (53%), Gaps = 10/201 (4%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFCRELMIASSLHHPNIVPLVGFCID 128
GA SF + + VA+K L ++D E F RE+ I L HPNIV +G
Sbjct: 46 GAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ 105
Query: 129 PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERC 188
P L ++ +Y+S GSL R LH K G R L R +A +A+ + YLHN
Sbjct: 106 PPN-LSIVTEYLSRGSLYRLLH--KSGAR--EQLDERRRLSMAYDVAKGMNYLHNRNP-P 159
Query: 189 VVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVS 248
+VHR++K N+L+ K K+CDFGL+ + S K+ GT ++APE + +
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA--STFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 249 DKTDVYAFGVVLLELLTGRKP 269
+K+DVY+FGV+L EL T ++P
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 112/211 (53%), Gaps = 27/211 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRL---DKEDKESSKAFCRELMIASSLHHPNIVPLVG 124
LG G +S V+ + +L VAIK + +E +E+ K F RE+ +S L H NIV ++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 125 FCIDPEQG-LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAYL 181
+D E +L+ +Y+ G +L ++ S P SV + I + + +
Sbjct: 79 --VDEEDDCYYLVMEYIEGPTLSEYIE---------SHGPLSVDTAINFTNQILDGIKHA 127
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT--VKGTFGYLAP 239
H + +VHRDIKP NIL+ S K K+ DFG+A S S L +T V GT Y +P
Sbjct: 128 H---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS---LTQTNHVLGTVQYFSP 181
Query: 240 EYFQHGKVSDK-TDVYAFGVVLLELLTGRKP 269
E + G+ +D+ TD+Y+ G+VL E+L G P
Sbjct: 182 EQAK-GEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 114/228 (50%), Gaps = 29/228 (12%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS-------KAFCRELMI 110
A + + +G+G V KG++ ++ VAIK L D E + F RE+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 111 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 170
S+L+HPNIV L G +P + ++ ++V G L L +K ++ WSV+ ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR---MVMEFVPCGDLYHRLLDKAHPIK------WSVKLRL 127
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSS--KKIP---KLCDFGLATWTSAPSVPF 225
L IA + Y+ N +VHRD++ NI L S + P K+ DFGL+ S SV
Sbjct: 128 MLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-QSVHSVSG 185
Query: 226 LCKTVKGTFGYLAPEYF--QHGKVSDKTDVYAFGVVLLELLTGRKPIE 271
L G F ++APE + ++K D Y+F ++L +LTG P +
Sbjct: 186 LL----GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 114/228 (50%), Gaps = 29/228 (12%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS-------KAFCRELMI 110
A + + +G+G V KG++ ++ VAIK L D E + F RE+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 111 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 170
S+L+HPNIV L G +P + ++ ++V G L L +K ++ WSV+ ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR---MVMEFVPCGDLYHRLLDKAHPIK------WSVKLRL 127
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSS--KKIP---KLCDFGLATWTSAPSVPF 225
L IA + Y+ N +VHRD++ NI L S + P K+ DFG TS SV
Sbjct: 128 MLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG----TSQQSVHS 182
Query: 226 LCKTVKGTFGYLAPEYF--QHGKVSDKTDVYAFGVVLLELLTGRKPIE 271
+ + G F ++APE + ++K D Y+F ++L +LTG P +
Sbjct: 183 VSGLL-GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 83 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 134
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 135 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTL 187
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 188 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 229
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 114/228 (50%), Gaps = 29/228 (12%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRL-------DKEDKESSKAFCRELMI 110
A + + +G+G V KG++ ++ VAIK L + E E + F RE+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 111 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 170
S+L+HPNIV L G +P + ++ ++V G L L +K ++ WSV+ ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR---MVMEFVPCGDLYHRLLDKAHPIK------WSVKLRL 127
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSS--KKIP---KLCDFGLATWTSAPSVPF 225
L IA + Y+ N +VHRD++ NI L S + P K+ DF L+ S SV
Sbjct: 128 MLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-QSVHSVSG 185
Query: 226 LCKTVKGTFGYLAPEYF--QHGKVSDKTDVYAFGVVLLELLTGRKPIE 271
L G F ++APE + ++K D Y+F ++L +LTG P +
Sbjct: 186 LL----GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 120
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTL 173
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 68 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 119
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 120 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTL 172
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 214
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 63 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 114
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 115 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTL 167
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 168 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 209
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTL 170
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 120
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTL 173
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 122
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 123 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTL 175
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 122
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 29 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+G+ P+ L ++ ++ G SL HLH + + +A A + YLH
Sbjct: 86 MGYSTKPQ--LAIVTQWCEGSSLYHHLHASETKFEMKKLI------DIARQTARGMDYLH 137
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+K +NI L K+ DFGLAT S S + + G+ ++APE
Sbjct: 138 ---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 243 Q---HGKVSDKTDVYAFGVVLLELLTGRKP 269
+ S ++DVYAFG+VL EL+TG+ P
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 120
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTL 173
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 120
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTL 173
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 67 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 118
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 119 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC----GTL 171
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 122
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 17 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 73
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+G+ P+ L ++ ++ G SL HLH + + +A A + YLH
Sbjct: 74 MGYSTKPQ--LAIVTQWCEGSSLYHHLHASETKFEMKKLI------DIARQTARGMDYLH 125
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+K +NI L K+ DFGLAT S S + + G+ ++APE
Sbjct: 126 ---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 182
Query: 243 Q---HGKVSDKTDVYAFGVVLLELLTGRKP 269
+ S ++DVYAFG+VL EL+TG+ P
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 122
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 123 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTL 175
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GTL 170
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 92 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 143
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 144 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTL 196
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 238
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC----GTL 170
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTL 170
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTL 170
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 70 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 121
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 122 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTL 174
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 216
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 122
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 29 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+G+ P+ L ++ ++ G SL HLH + + +A A + YLH
Sbjct: 86 MGYSTAPQ--LAIVTQWCEGSSLYHHLHASETKFEMKKLI------DIARQTARGMDYLH 137
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+K +NI L K+ DFGLAT S S + + G+ ++APE
Sbjct: 138 ---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 243 Q---HGKVSDKTDVYAFGVVLLELLTGRKP 269
+ S ++DVYAFG+VL EL+TG+ P
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 65 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 116
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 117 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTL 169
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 170 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 211
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 109/223 (48%), Gaps = 20/223 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 67 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 118
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT-SAPSVPFLCKTVKGT 233
A +++Y H+ + V+HRDIKP N+LL S K+ DFG W+ APS T+ GT
Sbjct: 119 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFG---WSCHAPSS--RRTTLSGT 170
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTL 170
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 67 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 118
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 119 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTL 171
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 92 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITEL 143
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 144 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTL 196
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 238
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 122
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 123 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTL 175
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTL 170
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 120
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTL 173
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 66 RHPNILRLYGYFHDSTR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 117
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 118 ANALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTL 170
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 17/213 (7%)
Query: 66 RVLGRGALSFVFKG----KVGLLRTSVAIKRLDKED-KESSKAFCRELMIASSLHHPNIV 120
+VLG GA V+KG + ++ VAIK L++ +++ F E +I +S+ HP++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L+G C+ P + L+ + + G L ++HE K + L W V+ IA+ + Y
Sbjct: 81 RLLGVCLSPT--IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMY 132
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
L ER +VHRD+ N+L+ S K+ DFGLA + K ++A E
Sbjct: 133 LE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 189
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+ K + ++DV+++GV + EL+T G KP +
Sbjct: 190 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 222
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G + + L + K + +
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPRGEVYKELQKLSKFDEQRTA-------TYITEL 122
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT
Sbjct: 123 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTL 175
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 17/213 (7%)
Query: 66 RVLGRGALSFVFKG----KVGLLRTSVAIKRLDKED-KESSKAFCRELMIASSLHHPNIV 120
+VLG GA V+KG + ++ VAIK L++ +++ F E +I +S+ HP++V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L+G C+ P + L+ + + G L ++HE K + L W V+ IA+ + Y
Sbjct: 104 RLLGVCLSPT--IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMY 155
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
L ER +VHRD+ N+L+ S K+ DFGLA + K ++A E
Sbjct: 156 LE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 212
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+ K + ++DV+++GV + EL+T G KP +
Sbjct: 213 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 245
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 120
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ +FG + + LC GT
Sbjct: 121 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GTL 173
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G++ R L + K + +
Sbjct: 68 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITEL 119
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ +FG + + LC GT
Sbjct: 120 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GTL 172
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 214
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 18/205 (8%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGF 125
+ +G+G V G VA+K + ++ +++AF E + + L H N+V L+G
Sbjct: 27 QTIGKGEFGDVMLGD--YRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGV 82
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
++ + GL+++ +Y++ GSL +L + + V G L K +L + E++ YL
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEYLEGNN 137
Query: 186 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHG 245
VHRD+ N+L+S + K+ DFGL S+ T K + APE +
Sbjct: 138 ---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREK 189
Query: 246 KVSDKTDVYAFGVVLLELLT-GRKP 269
K S K+DV++FG++L E+ + GR P
Sbjct: 190 KFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 18/219 (8%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSLHHP 117
+F GR LG+G V+ + + +A+K L K E + RE+ I S L HP
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
NI+ L G+ D + ++LI +Y G++ R L + + + +A +
Sbjct: 73 NILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSRFDEQRTA-------TYITELANA 124
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT YL
Sbjct: 125 LSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC----GTLDYL 177
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
PE + +K D+++ GV+ E L G P EA Q
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQ 216
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 18/205 (8%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGF 125
+ +G+G V G VA+K + ++ +++AF E + + L H N+V L+G
Sbjct: 12 QTIGKGEFGDVMLGD--YRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGV 67
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
++ + GL+++ +Y++ GSL +L + + V G L K +L + E++ YL
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEYLEGNN 122
Query: 186 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHG 245
VHRD+ N+L+S + K+ DFGL S+ T K + APE +
Sbjct: 123 ---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREK 174
Query: 246 KVSDKTDVYAFGVVLLELLT-GRKP 269
K S K+DV++FG++L E+ + GR P
Sbjct: 175 KFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 23/185 (12%)
Query: 94 DKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKK 153
D++ ++ + +E + + L HPNI+ L G C+ E L L+ ++ GG L R L K+
Sbjct: 43 DEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK-EPNLCLVMEFARGGPLNRVLSGKR 101
Query: 154 KGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSK--------K 205
+P + A+ IA + YLH+ ++HRD+K SNIL+ K K
Sbjct: 102 --------IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNK 153
Query: 206 IPKLCDFGLA-TWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELL 264
I K+ DFGLA W + + G + ++APE + S +DV+++GV+L ELL
Sbjct: 154 ILKITDFGLAREWHRTTKM-----SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELL 208
Query: 265 TGRKP 269
TG P
Sbjct: 209 TGEVP 213
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 18/219 (8%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSLHHP 117
+F GR LG+G V+ + + +A+K L K E + RE+ I S L HP
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
NI+ L G+ D + ++LI +Y G++ R L + + + +A +
Sbjct: 73 NILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSRFDEQRTA-------TYITELANA 124
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
++Y H+ + V+HRDIKP N+LL S K+ DFG + + LC GT YL
Sbjct: 125 LSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC----GTLDYL 177
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
PE + +K D+++ GV+ E L G P EA Q
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQ 216
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 18/205 (8%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGF 125
+ +G+G V G VA+K + ++ +++AF E + + L H N+V L+G
Sbjct: 199 QTIGKGEFGDVMLGD--YRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGV 254
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
++ + GL+++ +Y++ GSL +L + + V G L K +L + E++ YL
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEYLEGNN 309
Query: 186 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHG 245
VHRD+ N+L+S + K+ DFGL S+ T K + APE +
Sbjct: 310 ---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREK 361
Query: 246 KVSDKTDVYAFGVVLLELLT-GRKP 269
K S K+DV++FG++L E+ + GR P
Sbjct: 362 KFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 122
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 41 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 98 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 149
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+K +NI L K+ DFGLAT S S + + G+ ++APE
Sbjct: 150 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 243 Q---HGKVSDKTDVYAFGVVLLELLTGRKP 269
+ S ++DVYAFG+VL EL+TG+ P
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 122
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 18 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 75 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 126
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+K +NI L K+ DFGLAT S S + + G+ ++APE
Sbjct: 127 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 243 Q---HGKVSDKTDVYAFGVVLLELLTGRKP 269
+ S ++DVYAFG+VL EL+TG+ P
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 122
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 40 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 96
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 97 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 148
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+K +NI L K+ DFGLAT S S + + G+ ++APE
Sbjct: 149 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
Query: 243 Q---HGKVSDKTDVYAFGVVLLELLTGRKP 269
+ S ++DVYAFG+VL EL+TG+ P
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 122
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 33 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 89
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 90 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 141
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+K +NI L K+ DFGLAT S S + + G+ ++APE
Sbjct: 142 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
Query: 243 Q---HGKVSDKTDVYAFGVVLLELLTGRKP 269
+ S ++DVYAFG+VL EL+TG+ P
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 122
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 41 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 98 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 149
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+K +NI L K+ DFGLAT S S + + G+ ++APE
Sbjct: 150 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 243 Q---HGKVSDKTDVYAFGVVLLELLTGRKP 269
+ S ++DVYAFG+VL EL+TG+ P
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 122
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 13 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 70 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 121
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+K +NI L K+ DFGLAT S S + + G+ ++APE
Sbjct: 122 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 243 Q---HGKVSDKTDVYAFGVVLLELLTGRKP 269
+ S ++DVYAFG+VL EL+TG+ P
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 122
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 13 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 70 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 121
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+K +NI L K+ DFGLAT S S + + G+ ++APE
Sbjct: 122 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 243 Q---HGKVSDKTDVYAFGVVLLELLTGRKP 269
+ S ++DVYAFG+VL EL+TG+ P
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 122
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 18 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 75 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 126
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+K +NI L K+ DFGLAT S S + + G+ ++APE
Sbjct: 127 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 243 Q---HGKVSDKTDVYAFGVVLLELLTGRKP 269
+ S ++DVYAFG+VL EL+TG+ P
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 122
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 15 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 71
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 72 MGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 123
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+K +NI L K+ DFGLAT S S + + G+ ++APE
Sbjct: 124 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
Query: 243 Q---HGKVSDKTDVYAFGVVLLELLTGRKP 269
+ S ++DVYAFG+VL EL+TG+ P
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 122
G+ +G G+ V+KGK VA+K L+ + +AF E+ + H NI+
Sbjct: 13 GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+G+ P+ L ++ ++ G SL HLH + + +A A+ + YLH
Sbjct: 70 MGYSTAPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI------DIARQTAQGMDYLH 121
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ ++HRD+K +NI L K+ DFGLAT S S + + G+ ++APE
Sbjct: 122 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 243 Q---HGKVSDKTDVYAFGVVLLELLTGRKP 269
+ S ++DVYAFG+VL EL+TG+ P
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSL 114
A +F GR LG+G V+ + + +A+K L K E + RE+ I S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L G+ D + ++LI +Y G + + L + K + +
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPRGEVYKELQKLSKFDEQRTA-------TYITEL 122
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A +++Y H+ + V+HRDIKP N+LL S K+ DFG + APS + GT
Sbjct: 123 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV--HAPSS--RRXXLXGTL 175
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
YL PE + +K D+++ GV+ E L G+ P EA Q
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 18/205 (8%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGF 125
+ +G+G V G VA+K + ++ +++AF E + + L H N+V L+G
Sbjct: 18 QTIGKGEFGDVMLGD--YRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGV 73
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
++ + GL+++ +Y++ GSL +L + + V G L K +L + E++ YL
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEYLEGNN 128
Query: 186 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHG 245
VHRD+ N+L+S + K+ DFGL S+ T K + APE +
Sbjct: 129 ---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREA 180
Query: 246 KVSDKTDVYAFGVVLLELLT-GRKP 269
S K+DV++FG++L E+ + GR P
Sbjct: 181 AFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 114/233 (48%), Gaps = 25/233 (10%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIASSLHHPN 118
N+ + +G+G + V + L VA+K +DK SS + RE+ I L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIAE 176
IV L I+ E+ L+L+ +Y SGG + +L H + K + I
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ---------IVS 124
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT-WTSAPSVPFLCKTVKGTFG 235
+V Y H ++ +VHRD+K N+LL + K+ DFG + +T + C G+
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPP 177
Query: 236 YLAPEYFQHGKVSD--KTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAK 286
Y APE FQ GK D + DV++ GV+L L++G P + + L+ VL K
Sbjct: 178 YAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 114/233 (48%), Gaps = 25/233 (10%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIASSLHHPN 118
N+ + +G+G + V + L VA+K +DK SS + RE+ I L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIAE 176
IV L I+ E+ L+L+ +Y SGG + +L H + K + I
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ---------IVS 124
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT-WTSAPSVPFLCKTVKGTFG 235
+V Y H ++ +VHRD+K N+LL + K+ DFG + +T + C G+
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPP 177
Query: 236 YLAPEYFQHGKVSD--KTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAK 286
Y APE FQ GK D + DV++ GV+L L++G P + + L+ VL K
Sbjct: 178 YAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 114/233 (48%), Gaps = 25/233 (10%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE--DKESSKAFCRELMIASSLHHPN 118
N+ + +G+G + V + L VAIK +DK + S + RE+ I L+HPN
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIAE 176
IV L I+ E+ L+LI +Y SGG + +L H + K S I
Sbjct: 73 IVKLFE-VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ---------IVS 122
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT-WTSAPSVPFLCKTVKGTFG 235
+V Y H ++ +VHRD+K N+LL + K+ DFG + +T + C G+
Sbjct: 123 AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC----GSPP 175
Query: 236 YLAPEYFQHGKVSD--KTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAK 286
Y APE FQ GK D + DV++ GV+L L++G P + + L+ VL K
Sbjct: 176 YAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 227
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 113/233 (48%), Gaps = 25/233 (10%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE--DKESSKAFCRELMIASSLHHPN 118
N+ + +G+G + V + L VAIK +DK + S + RE+ I L+HPN
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIAE 176
IV L I+ E+ L+LI +Y SGG + +L H + K S I
Sbjct: 76 IVKLFE-VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ---------IVS 125
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT-WTSAPSVPFLCKTVKGTFG 235
+V Y H ++ +VHRD+K N+LL + K+ DFG + +T + C G
Sbjct: 126 AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC----GAPP 178
Query: 236 YLAPEYFQHGKVSD--KTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAK 286
Y APE FQ GK D + DV++ GV+L L++G P + + L+ VL K
Sbjct: 179 YAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 230
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 113/233 (48%), Gaps = 25/233 (10%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIASSLHHPN 118
N+ + +G+G + V + L VA+K +DK SS + RE+ I L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIAE 176
IV L I+ E+ L+L+ +Y SGG + +L H + K + I
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ---------IVS 124
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT-WTSAPSVPFLCKTVKGTFG 235
+V Y H ++ +VHRD+K N+LL + K+ DFG + +T + C G
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC----GAPP 177
Query: 236 YLAPEYFQHGKVSD--KTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAK 286
Y APE FQ GK D + DV++ GV+L L++G P + + L+ VL K
Sbjct: 178 YAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 113/233 (48%), Gaps = 25/233 (10%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIASSLHHPN 118
N+ + +G+G + V + L VA+K +DK SS + RE+ I L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIAE 176
IV L I+ E+ L+L+ +Y SGG + +L H + K + I
Sbjct: 75 IVKLFE-VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQ---------IVS 124
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT-WTSAPSVPFLCKTVKGTFG 235
+V Y H ++ +VHRD+K N+LL + K+ DFG + +T + C G
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFC----GAPP 177
Query: 236 YLAPEYFQHGKVSD--KTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAK 286
Y APE FQ GK D + DV++ GV+L L++G P + + L+ VL K
Sbjct: 178 YAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPN 118
+ G +LG G +S V + L VA+K L + D F RE A++L+HP
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 90
Query: 119 IVPL--VGFCIDPEQGL-FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
IV + G P L +++ +YV G +L +H + P + + + + IA
Sbjct: 91 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------PMTPKRAIEV-IA 140
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL--ATWTSAPSVPFLCKTVKGT 233
++ L+ + ++HRD+KP+NI++S+ K+ DFG+ A S SV V GT
Sbjct: 141 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGT 199
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
YL+PE + V ++DVY+ G VL E+LTG P
Sbjct: 200 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 22/221 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS-KAFCRELMIASSLHHPNI 119
++ V+G GA + V + VAIKR++ E ++S +E+ S HHPNI
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 120 VPL-VGFCIDPEQGLFLIYKYVSGGS---LERHL---HEKKKGVRGNSTLPWSVRYKVAL 172
V F + E L+L+ K +SGGS + +H+ E K GV ST+ +R
Sbjct: 76 VSYYTSFVVKDE--LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE---- 129
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP---SVPFLCKT 229
+ E + YLH + +HRD+K NILL ++ DFG++ + + + + KT
Sbjct: 130 -VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 230 VKGTFGYLAPEYFQHGKVSD-KTDVYAFGVVLLELLTGRKP 269
GT ++APE + + D K D+++FG+ +EL TG P
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 114/233 (48%), Gaps = 25/233 (10%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIASSLHHPN 118
N+ + +G+G + V + L VA++ +DK SS + RE+ I L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIAE 176
IV L I+ E+ L+L+ +Y SGG + +L H + K + I
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ---------IVS 124
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT-WTSAPSVPFLCKTVKGTFG 235
+V Y H ++ +VHRD+K N+LL + K+ DFG + +T + C G+
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPP 177
Query: 236 YLAPEYFQHGKVSD--KTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAK 286
Y APE FQ GK D + DV++ GV+L L++G P + + L+ VL K
Sbjct: 178 YAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPN 118
+ G +LG G +S V + L VA+K L + D F RE A++L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 119 IVPL--VGFCIDPEQGL-FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
IV + G P L +++ +YV G +L +H + P + + + + IA
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------PMTPKRAIEV-IA 123
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL--ATWTSAPSVPFLCKTVKGT 233
++ L+ + ++HRD+KP+NI++S+ K+ DFG+ A S SV V GT
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGT 182
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
YL+PE + V ++DVY+ G VL E+LTG P
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 113/235 (48%), Gaps = 29/235 (12%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIASSLHHPN 118
N+ + +G+G + V + L VA+K +DK SS + RE+ I L+HPN
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGS----LERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
IV L I+ E+ L+L+ +Y SGG L H K+K R I
Sbjct: 68 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-----------QI 115
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT-WTSAPSVPFLCKTVKGT 233
+V Y H ++ +VHRD+K N+LL + K+ DFG + +T + C G+
Sbjct: 116 VSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GS 168
Query: 234 FGYLAPEYFQHGKVSD--KTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAK 286
Y APE FQ GK D + DV++ GV+L L++G P + + L+ VL K
Sbjct: 169 PPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 222
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 25/233 (10%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE--DKESSKAFCRELMIASSLHHPN 118
N+ + +G+G + V + L VA+K +DK + S + RE+ I L+HPN
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIAE 176
IV L I+ E+ L+L+ +Y SGG + +L H + K + I
Sbjct: 76 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ---------IVS 125
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT-WTSAPSVPFLCKTVKGTFG 235
+V Y H ++ +VHRD+K N+LL K+ DFG + +T + C G+
Sbjct: 126 AVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC----GSPP 178
Query: 236 YLAPEYFQHGKVSD--KTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAK 286
Y APE FQ GK D + DV++ GV+L L++G P + + L+ VL K
Sbjct: 179 YAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 230
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPN 118
+ G +LG G +S V + L VA+K L + D F RE A++L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 119 IVPL--VGFCIDPEQGL-FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
IV + G P L +++ +YV G +L +H + P + + + + IA
Sbjct: 74 IVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------PMTPKRAIEV-IA 123
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL--ATWTSAPSVPFLCKTVKGT 233
++ L+ + ++HRD+KP+NI++S+ K+ DFG+ A S SV V GT
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGT 182
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
YL+PE + V ++DVY+ G VL E+LTG P
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 17/218 (7%)
Query: 64 KGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHHPN 118
K +VLG G V KG + ++ V IK + DK ++S +A ++ SL H +
Sbjct: 35 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 94
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
IV L+G C P L L+ +Y+ GSL H+ + + + L W V+ IA+ +
Sbjct: 95 IVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGM 146
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
YL E +VHR++ N+LL S ++ DFG+A L K ++A
Sbjct: 147 YYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRL 275
E GK + ++DV+++GV + EL+T G +P RL
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL 241
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 17/218 (7%)
Query: 64 KGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHHPN 118
K +VLG G V KG + ++ V IK + DK ++S +A ++ SL H +
Sbjct: 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 76
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
IV L+G C P L L+ +Y+ GSL H+ + + + L W V+ IA+ +
Sbjct: 77 IVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGM 128
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
YL E +VHR++ N+LL S ++ DFG+A L K ++A
Sbjct: 129 YYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRL 275
E GK + ++DV+++GV + EL+T G +P RL
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL 223
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 22/221 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS-KAFCRELMIASSLHHPNI 119
++ V+G GA + V + VAIKR++ E ++S +E+ S HHPNI
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 120 VPL-VGFCIDPEQGLFLIYKYVSGGS---LERHL---HEKKKGVRGNSTLPWSVRYKVAL 172
V F + E L+L+ K +SGGS + +H+ E K GV ST+ +R
Sbjct: 71 VSYYTSFVVKDE--LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE---- 124
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP---SVPFLCKT 229
+ E + YLH + +HRD+K NILL ++ DFG++ + + + + KT
Sbjct: 125 -VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 230 VKGTFGYLAPEYFQHGKVSD-KTDVYAFGVVLLELLTGRKP 269
GT ++APE + + D K D+++FG+ +EL TG P
Sbjct: 181 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 103/188 (54%), Gaps = 24/188 (12%)
Query: 106 RELMIASSLHHPNIVPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPW 164
REL + + P IV G F D E + + +++ GGSL++ L E K+ +P
Sbjct: 63 RELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKEAKR-------IPE 113
Query: 165 SVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVP 224
+ KV++ + +AYL + ++HRD+KPSNIL++S+ KLCDFG+ S +
Sbjct: 114 EILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLID 167
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI---EARRLQGEENL 281
+ + GT Y+APE Q S ++D+++ G+ L+EL GR PI +A+ L+
Sbjct: 168 SMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEA---- 223
Query: 282 VLWAKPIL 289
++ +P++
Sbjct: 224 -IFGRPVV 230
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVG 124
G VLG+G K + +K L + D+E+ + F +E+ + L HPN++ +G
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 125 FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 184
+ ++ L I +Y+ GG+L + +S PWS R A IA +AYLH+
Sbjct: 75 -VLYKDKRLNFITEYIKGGTLRGIIKSM------DSQYPWSQRVSFAKDIASGMAYLHSM 127
Query: 185 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATW-----TSAPSVPFLCK-------TVKG 232
++HRD+ N L+ K + DFGLA T + L K TV G
Sbjct: 128 N---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 233 TFGYLAPEYFQHGKVSDKTDVYAFGVVLLELL 264
++APE +K DV++FG+VL E++
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 114/233 (48%), Gaps = 25/233 (10%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIASSLHHPN 118
N+ + +G+G + V + L VA++ +DK SS + RE+ I L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIAE 176
IV L I+ E+ L+L+ +Y SGG + +L H + K + I
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ---------IVS 124
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT-WTSAPSVPFLCKTVKGTFG 235
+V Y H ++ +VHRD+K N+LL + K+ DFG + +T + C G+
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC----GSPP 177
Query: 236 YLAPEYFQHGKVSD--KTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAK 286
Y APE FQ GK D + DV++ GV+L L++G P + + L+ VL K
Sbjct: 178 YAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 35/226 (15%)
Query: 65 GRVLGRGALSFVFK---GKVGLL-------RTSVAIKRLDKEDKESSKAFCRELMIASSL 114
G V+ L+FV + G+ GL+ + VAIK + +E S + F E + L
Sbjct: 1 GSVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKL 59
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HP +V L G C++ + + L+++++ G L +L ++G+ TL + L +
Sbjct: 60 SHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLR-TQRGLFAAETL-----LGMCLDV 112
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK 228
E +AYL E CV+HRD+ N L+ ++ K+ DFG+ +TS+ F K
Sbjct: 113 CEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 169
Query: 229 TVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEAR 273
+ +PE F + S K+DV++FGV++ E+ + G+ P E R
Sbjct: 170 -------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 208
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDK--ESSKAFCRELMIASSLHHPNIVPLVGF 125
+G G+ V+KGK VA+K L D E +AF E+ + H NI+ +G+
Sbjct: 44 IGSGSFGTVYKGK---WHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
+ L ++ ++ G SL +HLH ++ + + +A A+ + YLH
Sbjct: 101 MT--KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLI------DIARQTAQGMDYLH--- 149
Query: 186 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ-- 243
+ ++HRD+K +NI L K+ DFGLAT S S + G+ ++APE +
Sbjct: 150 AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 244 -HGKVSDKTDVYAFGVVLLELLTGRKP 269
+ S ++DVY++G+VL EL+TG P
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 20/216 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSLHHP 117
+F GR LG+G V+ + VA+K L K E RE+ I + LHHP
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
NI+ L + D + ++LI +Y G L + L + + T + +A++
Sbjct: 84 NILRLYNYFYD-RRRIYLILEYAPRGELYKELQK-------SCTFDEQRTATIMEELADA 135
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT-SAPSVPFLCKTVKGTFGY 236
+ Y H + V+HRDIKP N+LL K K+ DFG W+ APS+ KT+ GT Y
Sbjct: 136 LMYCHG---KKVIHRDIKPENLLLGLKGELKIADFG---WSVHAPSL--RRKTMCGTLDY 187
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
L PE + ++K D++ GV+ ELL G P E+
Sbjct: 188 LPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFES 223
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
+G G V G L + VAIK + KE S F E + L HP +V L G C+
Sbjct: 35 IGSGQFGLVHLG-YWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
+ + + L+++++ G L +L ++G+ TL + L + E +AYL E
Sbjct: 93 E-QAPICLVFEFMEHGCLSDYLR-TQRGLFAAETL-----LGMCLDVCEGMAYLE---EA 142
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
CV+HRD+ N L+ ++ K+ DFG+ +TS+ F K + +PE
Sbjct: 143 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK-------WASPEV 195
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKPIEAR 273
F + S K+DV++FGV++ E+ + G+ P E R
Sbjct: 196 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 228
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 26/213 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
+G G V G L + VAIK + +E S + F E + L HP +V L G C+
Sbjct: 18 IGSGQFGLVHLG-YWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
+ + + L+++++ G L +L ++G+ TL + L + E +AYL E
Sbjct: 76 E-QAPICLVFEFMEHGCLSDYLR-TQRGLFAAETL-----LGMCLDVCEGMAYLE---EA 125
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
CV+HRD+ N L+ ++ K+ DFG+ +TS+ F K + +PE
Sbjct: 126 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK-------WASPEV 178
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKPIEAR 273
F + S K+DV++FGV++ E+ + G+ P E R
Sbjct: 179 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 211
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 26/213 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
+G G V G L + VAIK + +E S + F E + L HP +V L G C+
Sbjct: 13 IGSGQFGLVHLG-YWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
+ + + L+++++ G L +L ++G+ TL + L + E +AYL E
Sbjct: 71 E-QAPICLVFEFMEHGCLSDYLR-TQRGLFAAETL-----LGMCLDVCEGMAYLE---EA 120
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
CV+HRD+ N L+ ++ K+ DFG+ +TS+ F K + +PE
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK-------WASPEV 173
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKPIEAR 273
F + S K+DV++FGV++ E+ + G+ P E R
Sbjct: 174 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 206
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPN 118
+ G +LG G +S V + VA+K L + D F RE A++L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 119 IVPL--VGFCIDPEQGL-FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
IV + G P L +++ +YV G +L +H + P + + + + IA
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------PMTPKRAIEV-IA 123
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL--ATWTSAPSVPFLCKTVKGT 233
++ L+ + ++HRD+KP+NIL+S+ K+ DFG+ A S SV V GT
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSV-XQTAAVIGT 182
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
YL+PE + V ++DVY+ G VL E+LTG P
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 19/217 (8%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPN 118
+ G +LG G +S V + VA+K L + D F RE A++L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 119 IVPL--VGFCIDPEQGL-FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
IV + G P L +++ +YV G +L +H + P + + + + IA
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------PMTPKRAIEV-IA 123
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL--ATWTSAPSVPFLCKTVKGT 233
++ L+ + ++HRD+KP+NI++S+ K+ DFG+ A S SV V GT
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGT 182
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
YL+PE + V ++DVY+ G VL E+LTG P
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 19/210 (9%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKR--LDKEDKESSKAFCRELMIASSLHHPNI 119
+ K +G G V+K K R VA+KR LD ED+ RE+ + LHHPNI
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 120 VPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL-GIAESV 178
V L+ I E+ L L+++++ L++ L E K G++ + + K+ L + V
Sbjct: 82 VSLID-VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS-------QIKIYLYQLLRGV 132
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
A+ H + ++HRD+KP N+L++S KL DFGLA P + + V T Y A
Sbjct: 133 AHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRA 187
Query: 239 PEYFQHG-KVSDKTDVYAFGVVLLELLTGR 267
P+ K S D+++ G + E++TG+
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPN 118
+ G +LG G +S V + VA+K L + D F RE A++L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 119 IVPL--VGFCIDPEQGL-FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
IV + G P L +++ +YV G +L +H + P + + + + IA
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------PMTPKRAIEV-IA 123
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL--ATWTSAPSVPFLCKTVKGT 233
++ L+ + ++HRD+KP+NI++S+ K+ DFG+ A S SV V GT
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGT 182
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
YL+PE + V ++DVY+ G VL E+LTG P
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 19/210 (9%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKR--LDKEDKESSKAFCRELMIASSLHHPNI 119
+ K +G G V+K K R VA+KR LD ED+ RE+ + LHHPNI
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 120 VPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL-GIAESV 178
V L+ I E+ L L+++++ L++ L E K G++ + + K+ L + V
Sbjct: 82 VSLID-VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS-------QIKIYLYQLLRGV 132
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
A+ H + ++HRD+KP N+L++S KL DFGLA P + + V T Y A
Sbjct: 133 AHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRA 187
Query: 239 PEYFQHG-KVSDKTDVYAFGVVLLELLTGR 267
P+ K S D+++ G + E++TG+
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IAE
Sbjct: 74 PHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAE 125
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 126 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 219
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
+G G V G L + VAIK + +E S + F E + L HP +V L G C+
Sbjct: 16 IGSGQFGLVHLG-YWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
+ + + L+ +++ G L +L ++G+ TL + L + E +AYL E
Sbjct: 74 E-QAPICLVTEFMEHGCLSDYLR-TQRGLFAAETL-----LGMCLDVCEGMAYLE---EA 123
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
CV+HRD+ N L+ ++ K+ DFG+ +TS+ F K + +PE
Sbjct: 124 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK-------WASPEV 176
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKPIEAR 273
F + S K+DV++FGV++ E+ + G+ P E R
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 209
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 21/207 (10%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIVPLV 123
G +GRG VF G++ T VA+K + KA F +E I HPNIV L+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG-IAESVAYLH 182
G C +Q ++++ + V GG L + +G R +R K L + ++ A +
Sbjct: 179 GVCTQ-KQPIYIVMELVQGGDFLTFL--RTEGAR--------LRVKTLLQMVGDAAAGME 227
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGL----ATWTSAPSVPFLCKTVKGTFGYLA 238
+C +HRD+ N L++ K + K+ DFG+ A A S VK T A
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT----A 283
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLT 265
PE +G+ S ++DV++FG++L E +
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 78 PHVCRLLGICLT--STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAK 129
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 130 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 223
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 17/216 (7%)
Query: 60 HNFSKGRVLGRGALSFVF----KGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLH 115
+F RV+GRG+ + V K + V K L +D++ + + + +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HP +V L C E LF + +YV+GG L H+ ++K LP + I+
Sbjct: 112 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRK-------LPEEHARFYSAEIS 163
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
++ YLH ER +++RD+K N+LL S+ KL D+G+ P T GT
Sbjct: 164 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPN 218
Query: 236 YLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIE 271
Y+APE + D +A GV++ E++ GR P +
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSLHHP 117
+F GR LG+G V+ + + +A+K L K E RE+ I S L HP
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
NI+ + + D + ++L+ ++ G L + L + + S A + E
Sbjct: 75 NILRMYNYFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRS----------ATFMEEL 123
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT-SAPSVPFLCKTVKGTFGY 236
LH ER V+HRDIKP N+L+ K K+ DFG W+ APS+ + + GT Y
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSL--RRRXMCGTLDY 178
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
L PE + +K D++ GV+ E L G P ++
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSLHHP 117
+F GR LG+G V+ + + +A+K L K E RE+ I S L HP
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
NI+ + + D + ++L+ ++ G L + L + + S A + E
Sbjct: 76 NILRMYNYFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRS----------ATFMEEL 124
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
LH ER V+HRDIKP N+L+ K K+ DFG + + +C GT YL
Sbjct: 125 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYL 180
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
PE + +K D++ GV+ E L G P ++
Sbjct: 181 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 21/207 (10%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA-FCRELMIASSLHHPNIVPLV 123
G +GRG VF G++ T VA+K + KA F +E I HPNIV L+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG-IAESVAYLH 182
G C +Q ++++ + V GG L + +G R +R K L + ++ A +
Sbjct: 179 GVCTQ-KQPIYIVMELVQGGDFLTFL--RTEGAR--------LRVKTLLQMVGDAAAGME 227
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGL----ATWTSAPSVPFLCKTVKGTFGYLA 238
+C +HRD+ N L++ K + K+ DFG+ A A S VK T A
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT----A 283
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLT 265
PE +G+ S ++DV++FG++L E +
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 78 PHVCRLLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 129
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 130 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 80 PHVCRLLGICL--TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 131
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 132 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 77 PHVCRLLGICLT--STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAK 128
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 129 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 77 PHVCRLLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 128
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 129 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 79 PHVCRLLGICL--TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 130
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 131 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 112/226 (49%), Gaps = 35/226 (15%)
Query: 65 GRVLGRGALSFVFK---GKVGLL-------RTSVAIKRLDKEDKESSKAFCRELMIASSL 114
G V+ L+FV + G+ GL+ + VAIK + +E S + F E + L
Sbjct: 1 GSVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKL 59
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HP +V L G C++ + + L+++++ G L +L ++G+ TL + L +
Sbjct: 60 SHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLR-TQRGLFAAETL-----LGMCLDV 112
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCK 228
E +AYL E V+HRD+ N L+ ++ K+ DFG+ +TS+ F K
Sbjct: 113 CEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 169
Query: 229 TVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEAR 273
+ +PE F + S K+DV++FGV++ E+ + G+ P E R
Sbjct: 170 -------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 208
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 109/212 (51%), Gaps = 17/212 (8%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 119
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 120 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 86 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 136
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
YL + ++HRD+KPSNIL++S+ KLCDFG+ S + + + GT Y++
Sbjct: 137 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMS 190
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
PE Q S ++D+++ G+ L+E+ GR PI
Sbjct: 191 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 21/218 (9%)
Query: 56 LAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASS 113
L + NF K +G G V+K + L VA+K RLD E + RE+ +
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKV 170
L+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 63 LNHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 112
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 230
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V
Sbjct: 113 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 169
Query: 231 KGTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
T Y APE K S D+++ G + E++T R
Sbjct: 170 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 84 PHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 135
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 136 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 79 PHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 130
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 131 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 81 PHVCRLLGICL--TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 132
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 133 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 226
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 83 PHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 134
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 135 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 228
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
N+V L+G C P L +I ++ G+L +L K+ N +P+ YK L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKDLYKDFLTLEHL 146
Query: 178 VAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 230
+ Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 147 ICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 231 KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++APE + ++DV++FGV+L E+ + G P ++ E
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 255
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 21/218 (9%)
Query: 56 LAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASS 113
L + NF K +G G V+K + L VA+K RLD E + RE+ +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKV 170
L+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 62 LNHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 111
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 230
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V
Sbjct: 112 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 231 KGTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
T Y APE K S D+++ G + E++T R
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 77 PHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 128
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 129 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 80 PHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 131
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 132 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 80 PHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 131
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 132 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 80 PHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 131
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 132 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 77 PHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 128
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 129 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 71 PHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 122
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 123 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 87 PHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 138
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 139 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 232
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 81 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 131
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK-------WTAPES 184
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 185 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 102 PHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 153
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 154 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 247
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 82 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 132
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK-------WTAPES 185
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 60 HNFSKGRVLGRGALSFVF----KGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLH 115
+F RV+GRG+ + V K + V K L +D++ + + + +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HP +V L C E LF + +YV+GG L H+ ++K LP + I+
Sbjct: 80 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRK-------LPEEHARFYSAEIS 131
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP--SVPFLCKTVKGT 233
++ YLH ER +++RD+K N+LL S+ KL D+G+ P + C GT
Sbjct: 132 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC----GT 184
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIE 271
Y+APE + D +A GV++ E++ GR P +
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 109/218 (50%), Gaps = 12/218 (5%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC---RELMIASSLHHP 117
NF + +GRG S V++ L VA+K++ D +KA +E+ + L+HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
N++ I+ + L ++ + G L R + KK R +P +K + + +
Sbjct: 93 NVIKYYASFIE-DNELNIVLELADAGDLSRMIKHFKKQKR---LIPERTVWKYFVQLCSA 148
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ ++H+ R V+HRDIKP+N+ +++ + KL D GL + S+ + ++ GT Y+
Sbjct: 149 LEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYM 203
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRL 275
+PE + K+D+++ G +L E+ + P ++
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM 241
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPL 122
RVLG+G+ V K + A+K + K + K ++ RE+ + L HPNI+ L
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 123 VGFCIDPEQGLF-LIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
F D +G F L+ + +GG L + +K+ ++ ++ + + Y+
Sbjct: 92 YEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-------RIIRQVLSGITYM 142
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
H +VHRD+KP N+LL SK ++ DFGL+T A K GT Y+A
Sbjct: 143 HKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIA 196
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
PE HG +K DV++ GV+L LL+G P
Sbjct: 197 PEVL-HGTYDEKCDVWSTGVILYILLSGCPPF 227
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 15/228 (6%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCR---ELMIASSLHHP 117
+F G +LG+G+ + V++ + VAIK +DK+ + R E+ I L HP
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
+I+ L + D ++L+ + G + R+L + K N + + I
Sbjct: 72 SILELYNYFEDSNY-VYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ------IITG 124
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH+ ++HRD+ SN+LL+ K+ DFGLAT P T+ GT Y+
Sbjct: 125 MLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY--TLCGTPNYI 179
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWA 285
+PE ++DV++ G + LL GR P + ++ N V+ A
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 109/212 (51%), Gaps = 17/212 (8%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 119
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 120 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 94 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 144
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
YL + ++HRD+KPSNIL++S+ KLCDFG+ S + + + GT Y++
Sbjct: 145 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMS 198
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
PE Q S ++D+++ G+ L+E+ GR PI
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 82 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 132
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 185
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 93 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 143
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 144 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 196
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 197 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 225
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 85 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 135
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 188
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 129/294 (43%), Gaps = 50/294 (17%)
Query: 63 SKGRVLGRGALSFVFKGKVGLLRTS-------VAIKRLDKEDKESSKA-FCRELMIASSL 114
++ +V+G G V+KG +L+TS VAIK L E + F E I
Sbjct: 47 TRQKVIGAGEFGEVYKG---MLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL-- 172
H NI+ L G I + + +I +Y+ G+L++ L EK +SV V +
Sbjct: 104 SHHNIIRLEG-VISKYKPMMIITEYMENGALDKFLREKDG--------EFSVLQLVGMLR 154
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKTVK 231
GIA + YL N VHRD+ NIL++S + K+ DFGL+ P + K
Sbjct: 155 GIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVLWAKPILH 290
+ APE + K + +DV++FG+V+ E++T G +P + + H
Sbjct: 212 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP--------------YWELSNH 257
Query: 291 RGMAAVEE--LLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAIL 342
M A+ + L + C S C E +RRP +I++IL
Sbjct: 258 EVMKAINDGFRLPTPMDCPS-------AIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 20/221 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 119
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 120 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 67 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 117
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
YL + ++HRD+KPSNIL++S+ KLCDFG+ S + + + GT Y++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMS 171
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI---EARRLQ 276
PE Q S ++D+++ G+ L+E+ GR PI +A+ L+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 82 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 132
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 185
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L+++ H+H+ K S L P + +
Sbjct: 63 IVKLLD-VIHTENKLYLVFE---------HVHQDLKTFMDASALTGIPLPLIKSYLFQLL 112
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 113 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 167
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 20/221 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 119
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 120 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 67 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 117
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
YL + ++HRD+KPSNIL++S+ KLCDFG+ S + + + GT Y++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMS 171
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI---EARRLQ 276
PE Q S ++D+++ G+ L+E+ GR PI +A+ L+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE 212
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 20/221 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 119
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 120 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 129 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 179
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
YL + ++HRD+KPSNIL++S+ KLCDFG+ S + + + GT Y++
Sbjct: 180 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMS 233
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI---EARRLQ 276
PE Q S ++D+++ G+ L+E+ GR PI +A+ L+
Sbjct: 234 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE 274
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 20/221 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 119
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 120 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 67 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 117
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
YL + ++HRD+KPSNIL++S+ KLCDFG+ S + + + GT Y++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMS 171
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI---EARRLQ 276
PE Q S ++D+++ G+ L+E+ GR PI +A+ L+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE 212
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 20/221 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 119
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 120 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 67 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 117
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
YL + ++HRD+KPSNIL++S+ KLCDFG+ S + + + GT Y++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMS 171
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI---EARRLQ 276
PE Q S ++D+++ G+ L+E+ GR PI +A+ L+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 80 R-EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 130
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 183
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 85 R-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 135
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 188
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 85 R-EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 135
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 188
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 168
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 80 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 130
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 183
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPL 122
RVLG+G+ V K + A+K + K + K ++ RE+ + L HPNI+ L
Sbjct: 55 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 123 VGFCIDPEQGLF-LIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
F D +G F L+ + +GG L + +K+ ++ ++ + + Y+
Sbjct: 115 YEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-------RIIRQVLSGITYM 165
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
H +VHRD+KP N+LL SK ++ DFGL+T A K GT Y+A
Sbjct: 166 HKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIA 219
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
PE HG +K DV++ GV+L LL+G P
Sbjct: 220 PEVL-HGTYDEKCDVWSTGVILYILLSGCPPF 250
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L FC ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 98 FFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 149
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 150 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 206
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 207 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 248
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 80 R-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 130
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 183
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 85 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 135
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 188
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 56 LAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASS 113
L NF K +G G V+K + L VA+K RLD E + RE+ +
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKV 170
L+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 63 LNHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 112
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 230
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V
Sbjct: 113 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 169
Query: 231 KGTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
T Y APE K S D+++ G + E++T R
Sbjct: 170 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 80 R-EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 130
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 183
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 80 R-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 130
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 183
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPL 122
RVLG+G+ V K + A+K + K + K ++ RE+ + L HPNI+ L
Sbjct: 56 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 123 VGFCIDPEQGLF-LIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
F D +G F L+ + +GG L + +K+ ++ ++ + + Y+
Sbjct: 116 YEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-------RIIRQVLSGITYM 166
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
H +VHRD+KP N+LL SK ++ DFGL+T A K GT Y+A
Sbjct: 167 HKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIA 220
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
PE HG +K DV++ GV+L LL+G P
Sbjct: 221 PEVL-HGTYDEKCDVWSTGVILYILLSGCPPF 251
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 84 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 134
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 187
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 188 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 216
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKDFMDASALTGIPLPLIKSYLFQLL 113
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 114 QGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 80 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 130
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 183
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 60 HNFSKGRVLGRGALSFVF----KGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLH 115
+F RV+GRG+ + V K + V K L +D++ + + + +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HP +V L C E LF + +YV+GG L H+ ++K LP + I+
Sbjct: 65 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRK-------LPEEHARFYSAEIS 116
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP--SVPFLCKTVKGT 233
++ YLH ER +++RD+K N+LL S+ KL D+G+ P + C GT
Sbjct: 117 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC----GT 169
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIE 271
Y+APE + D +A GV++ E++ GR P +
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLH 115
+ NF K +G G V+K + L VA+K RLD E + RE+ + L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVAL 172
HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKG 232
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V
Sbjct: 111 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 233 TFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
T Y APE K S D+++ G + E++T R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 71 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 121 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 175
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 109/212 (51%), Gaps = 17/212 (8%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 119
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 120 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 67 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 117
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
YL + ++HRD+KPSNIL++S+ KLCDFG+ S + + + GT Y++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMS 171
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
PE Q S ++D+++ G+ L+E+ GR PI
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPL 122
RVLG+G+ V K + A+K + K + K ++ RE+ + L HPNI+ L
Sbjct: 38 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 123 VGFCIDPEQGLF-LIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
F D +G F L+ + +GG L + +K+ ++ ++ + + Y+
Sbjct: 98 YEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-------RIIRQVLSGITYM 148
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
H +VHRD+KP N+LL SK ++ DFGL+T A K GT Y+A
Sbjct: 149 HKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIA 202
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
PE HG +K DV++ GV+L LL+G P
Sbjct: 203 PEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNG 235
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 63 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 113 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 167
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 106/198 (53%), Gaps = 21/198 (10%)
Query: 88 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 147
+ I R+ +++E S+ RE+ + +++ HPNIV + L+++ Y GG L +
Sbjct: 57 INISRMSSKEREESR---REVAVLANMKHPNIVQYRE-SFEENGSLYIVMDYCEGGDLFK 112
Query: 148 HLHEKKKGV--RGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 205
++ +K GV + + L W V+ +AL ++H +R ++HRDIK NI L+
Sbjct: 113 RINAQK-GVLFQEDQILDWFVQICLAL------KHVH---DRKILHRDIKSQNIFLTKDG 162
Query: 206 IPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
+L DFG+A + S L + GT YL+PE ++ ++K+D++A G VL EL T
Sbjct: 163 TVQLGDFGIARVLN--STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
Query: 266 GRKPIEARRLQGEENLVL 283
+ EA ++ NLVL
Sbjct: 221 LKHAFEAGSMK---NLVL 235
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 114
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 171
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 61 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK 231
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V
Sbjct: 111 FQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 232 GTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
T Y APE K S D+++ G + E++T R
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 63 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 113 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 167
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 78 R-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 128
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIK-------WTAPES 181
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 114
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 171
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 63 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKTFMDASALTGIPLPLIKSYL 112
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK 231
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V
Sbjct: 113 FQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 232 GTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
T Y APE K S D+++ G + E++T R
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 168
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 63 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 113 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 167
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 60 HNFSKGRVLGRGALSFVF----KGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLH 115
+F RV+GRG+ + V K + V K L +D++ + + + +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HP +V L C E LF + +YV+GG L H+ ++K LP + I+
Sbjct: 69 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRK-------LPEEHARFYSAEIS 120
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP--SVPFLCKTVKGT 233
++ YLH ER +++RD+K N+LL S+ KL D+G+ P + C GT
Sbjct: 121 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC----GT 173
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIE 271
Y+APE + D +A GV++ E++ GR P +
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 56 LAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASS 113
L + NF K +G G V+K + L VA+K RLD E + RE+ +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
L+HPNIV L+ I E L+L+++++S +K + +P +
Sbjct: 62 LNHPNIVKLLD-VIHTENKLYLVFEFLSMDL------KKFMDASALTGIPLPLIKSYLFQ 114
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 115 LLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 234 FGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 63 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 113 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 167
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 65 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 115 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 169
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 114
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 171
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 61 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK 231
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V
Sbjct: 111 FQLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 232 GTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
T Y APE K S D+++ G + E++T R
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 114
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 171
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 62 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK 231
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V
Sbjct: 112 FQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 232 GTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
T Y APE K S D+++ G + E++T R
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 114
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 171
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 62 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK 231
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V
Sbjct: 112 FQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 232 GTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
T Y APE K S D+++ G + E++T R
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 168
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 114
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 171
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 63 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 112
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK 231
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V
Sbjct: 113 FQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 232 GTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
T Y APE K S D+++ G + E++T R
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 114
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 171
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 61 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK 231
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V
Sbjct: 111 FQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV- 166
Query: 232 GTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
T Y APE K S D+++ G + E++T R
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 114
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVA 171
+HPNIV L+ I E L+L++++ LH+ K S L P +
Sbjct: 62 NHPNIVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK 231
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V
Sbjct: 112 FQLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 232 GTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
T Y APE K S D+++ G + E++T R
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 71 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 121 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 175
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 59 THNFSKGRVLGRGALSFVFK--GKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH 116
+ N+ LG+GA S V + K L + I K + RE I L H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
PNIV L I E +L++ V+GG L + ++ +++ I E
Sbjct: 65 PNIVRLHD-SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILE 116
Query: 177 SVAYLH-NGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSVPFLCKTVKG 232
S+AY H NG +VHR++KP N+LL+SK KL DFGLA + G
Sbjct: 117 SIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAG 169
Query: 233 TFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
T GYL+PE + S D++A GV+L LL G P
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 24/233 (10%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 173
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 137
Query: 174 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 227 CKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++APE + ++DV++FGV+L E+ + G P ++ E
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 250
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 59 THNFSKGRVLGRGALSFVFK--GKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH 116
+ N+ LG+GA S V + K L + I K + RE I L H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
PNIV L I E +L++ V+GG L + ++ +++ I E
Sbjct: 64 PNIVRLHD-SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILE 115
Query: 177 SVAYLH-NGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSVPFLCKTVKG 232
S+AY H NG +VHR++KP N+LL+SK KL DFGLA + G
Sbjct: 116 SIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAG 168
Query: 233 TFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
T GYL+PE + S D++A GV+L LL G P
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 24/233 (10%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 173
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 146
Query: 174 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 227 CKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++APE + ++DV++FGV+L E+ + G P ++ E
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 78 R-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 128
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T T+ F K + APE
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-------WTAPES 181
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPLV 123
+LG+G+ V K K + + A+K ++K ++K++S RE+ + L HPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLF 87
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
D +++ + +GG L + ++K+ ++ ++ + + Y+H
Sbjct: 88 EILEDS-SSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFSGITYMH- 138
Query: 184 GTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
+ +VHRD+KP NILL SK+ K+ DFGL+T + K GT Y+APE
Sbjct: 139 --KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPE 193
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
+ G +K DV++ GV+L LL+G P
Sbjct: 194 VLR-GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 59 THNFSKGRVLGRGALSFVFK--GKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH 116
+ N+ LG+GA S V + K L + I K + RE I L H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
PNIV L I E +L++ V+GG L + ++ +++ I E
Sbjct: 65 PNIVRLHD-SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILE 116
Query: 177 SVAYLH-NGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSVPFLCKTVKG 232
S+AY H NG +VHR++KP N+LL+SK KL DFGLA + G
Sbjct: 117 SIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAG 169
Query: 233 TFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
T GYL+PE + S D++A GV+L LL G P
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 24/233 (10%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 173
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 137
Query: 174 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 227 CKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++APE + ++DV++FGV+L E+ + G P ++ E
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 250
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VL GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 84 PHVCRLLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 135
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 136 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAI L + +++K E + +S+ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 111 PHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 162
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 163 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 256
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 79 PHVCRLLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 130
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFG A A + + K +
Sbjct: 131 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 15/215 (6%)
Query: 56 LAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASS 113
L + NF K +G G V+K + L VA+K RLD E + RE+ +
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
L+HPNIV L+ I E L+L+++++S ++ + G +P +
Sbjct: 61 LNHPNIVKLLD-VIHTENKLYLVFEFLS---MDLKDFMDASALTG---IPLPLIKSYLFQ 113
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 114 LLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 234 FGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VL GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 84 PHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 135
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 136 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 79 PHVCRLLGICLT--STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 130
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFG A A + + K +
Sbjct: 131 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 81 PHVCRLLGICL--TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 132
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFG A A + + K +
Sbjct: 133 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 226
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 24/233 (10%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 173
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 146
Query: 174 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 227 CKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++APE + ++DV++FGV+L E+ + G P ++ E
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAF-CRELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYI--RKIGSFDET----CTRFYTA-EIVSA 144
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S + GT Y+
Sbjct: 145 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 201
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE S +D++A G ++ +L+ G P A G E L+
Sbjct: 202 SPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 243
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 84 PHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 135
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFG A A + + K +
Sbjct: 136 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 79 PHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 130
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFG A A + + K +
Sbjct: 131 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VL GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 77 PHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 128
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFGLA A + + K +
Sbjct: 129 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 81 R-EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 131
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T T+ F K + APE
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-------WTAPES 184
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 185 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 59 THNFSKGRVLGRGALSFVFK--GKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH 116
+ N+ LG+GA S V + K L + I K + RE I L H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
PNIV L I E +L++ V+GG L + ++ +++ I E
Sbjct: 88 PNIVRLHD-SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILE 139
Query: 177 SVAYLH-NGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSVPFLCKTVKG 232
S+AY H NG +VHR++KP N+LL+SK KL DFGLA + G
Sbjct: 140 SIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAG 192
Query: 233 TFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
T GYL+PE + S D++A GV+L LL G P
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 15/215 (6%)
Query: 56 LAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASS 113
L + NF K +G G V+K + L VA+K RLD E + RE+ +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
L+HPNIV L+ I E L+L+++++S ++ + G +P +
Sbjct: 62 LNHPNIVKLLD-VIHTENKLYLVFEFLS---MDLKDFMDASALTG---IPLPLIKSYLFQ 114
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 115 LLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 234 FGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 62 FSKGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHH 116
F K +VLG GA V+KG + ++ VAIK L + +++K E + +S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P++ L+G C+ + LI + + G L ++ E K + L W V+ IA+
Sbjct: 77 PHVCRLLGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 128
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
+ YL + R +VHRD+ N+L+ + + K+ DFG A A + + K +
Sbjct: 129 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+A E H + ++DV+++GV + EL+T G KP +
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 78 R-EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 128
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T T+ F K + APE
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-------WTAPES 181
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+K RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +++ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 114 QGLSFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 168
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 114
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
+HPNIV L+ I E L+L+++++S +K + +P + +
Sbjct: 61 NHPNIVKLLD-VIHTENKLYLVFEFLSMDL------KKFMDASALTGIPLPLIKSYLFQL 113
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 114 LQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 168
Query: 235 GYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 85 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 135
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T T+ F K + APE
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-------WTAPES 188
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ K S K+DV+AFGV+L E+ T G P
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 37/246 (15%)
Query: 39 SISPV--ANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE 96
S+ PV N + + EIL R +G+G+ V + + A+K ++K+
Sbjct: 1 SMPPVFDENEDVNFDHFEIL---------RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQ 51
Query: 97 ---DKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKK 153
++ + +EL I L HP +V L + E+ +F++ + GG L HL +
Sbjct: 52 KCVERNEVRNVFKELQIMQGLEHPFLVNL-WYSFQDEEDMFMVVDLLLGGDLRYHLQQ-- 108
Query: 154 KGVRGNSTLPWSVRYK---VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 210
+V +K V L I E V L + ++HRD+KP NILL +
Sbjct: 109 -----------NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHIT 157
Query: 211 DFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGK---VSDKTDVYAFGVVLLELLTGR 267
DF +A + T+ GT Y+APE F K S D ++ GV ELL GR
Sbjct: 158 DFNIAAMLPRETQ---ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
Query: 268 KPIEAR 273
+P R
Sbjct: 215 RPYHIR 220
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 284 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 334
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HR++ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 335 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 387
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
+ K S K+DV+AFGV+L E+ T
Sbjct: 388 LAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 90/180 (50%), Gaps = 11/180 (6%)
Query: 88 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 146
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 147 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 206
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 152
Query: 207 PKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
K+ DFGL F K + + APE K S +DV++FGVVL EL T
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 24/233 (10%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 173
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 146
Query: 174 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 227 CKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++APE + ++DV++FGV+L E+ + G P ++ E
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 24/233 (10%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 128
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 173
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 183
Query: 174 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 227 CKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++APE + ++DV++FGV+L E+ + G P ++ E
Sbjct: 244 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 296
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 287 R-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLE---KK 337
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HR++ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 390
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
+ K S K+DV+AFGV+L E+ T
Sbjct: 391 LAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKE-DKESSKAFCRELMIASSLHHPNIV-----P 121
LG G +V + VAIK+ +E ++ + +C E+ I L+HPN+V P
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK--GVRGNSTLPWSVRYKVALGIAESVA 179
+ P L +Y GG L ++L++ + G++ +R ++ I+ ++
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP-----IRTLLS-DISSALR 136
Query: 180 YLHNGTERCVVHRDIKPSNILLS---SKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
YLH E ++HRD+KP NI+L + I K+ D G A LC GT Y
Sbjct: 137 YLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQY 190
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
LAPE + K + D ++FG + E +TG +P
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKE-DKESSKAFCRELMIASSLHHPNIV-----P 121
LG G +V + VAIK+ +E ++ + +C E+ I L+HPN+V P
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK--GVRGNSTLPWSVRYKVALGIAESVA 179
+ P L +Y GG L ++L++ + G++ +R ++ I+ ++
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP-----IRTLLS-DISSALR 135
Query: 180 YLHNGTERCVVHRDIKPSNILLS---SKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
YLH E ++HRD+KP NI+L + I K+ D G A LC GT Y
Sbjct: 136 YLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQY 189
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
LAPE + K + D ++FG + E +TG +P
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 24/233 (10%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 173
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 137
Query: 174 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 227 CKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++APE + ++DV++FGV+L E+ + G P ++ E
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 250
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESS---KAFCRELMIASSLHHP 117
+F R LG+G V+ + + +A+K L K E RE+ I S L HP
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
NI+ + + D + ++L+ ++ G L + L + + S A + E
Sbjct: 75 NILRMYNYFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRS----------ATFMEEL 123
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT-SAPSVPFLCKTVKGTFGY 236
LH ER V+HRDIKP N+L+ K K+ DFG W+ APS+ + + GT Y
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSL--RRRXMCGTLDY 178
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
L PE + +K D++ GV+ E L G P ++
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+F + ++G G VFK K + + IKR+ K +++ RE+ + L H NIV
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV----KYNNEKAEREVKALAKLDHVNIV 67
Query: 121 PL----VGFCIDPEQG-----------LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS 165
GF DPE LF+ ++ G+LE+ + EK++G + + L
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALE 126
Query: 166 VRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPF 225
+ ++ G V Y+H+ + +++RD+KPSNI L K K+ DFGL T
Sbjct: 127 LFEQITKG----VDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX 179
Query: 226 LCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELL 264
KGT Y++PE + D+YA G++L ELL
Sbjct: 180 RS---KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL 114
+ NF K +G G V+K + L VA+K RLD E + RE+ + L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST--LPWSVRYKVAL 172
+HPNIV L+ I E L+L++++V + KK + ++ +P +
Sbjct: 63 NHPNIVKLLD-VIHTENKLYLVFEHVD--------QDLKKFMDASALTGIPLPLIKSYLF 113
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKG 232
+ + +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 233 TFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
T Y APE K S D+++ G + E++T R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 24/233 (10%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR----YKVALG 173
N+V L+G C P L +I ++ G+L +L K+ N +P+ V YK L
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKR-----NEFVPYKVAPEDLYKDFLT 137
Query: 174 IAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ + Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 227 CKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++APE + ++DV++FGV+L E+ + G P ++ E
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 250
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 22/213 (10%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPLV 123
+LG+G+ V K K + + A+K ++K ++K++S RE+ + L HPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLF 87
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
++ +++ + +GG L + ++K+ ++ ++ + + Y+H
Sbjct: 88 EI-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFSGITYMHK 139
Query: 184 GTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
+VHRD+KP NILL SK+ K+ DFGL+T + K GT Y+APE
Sbjct: 140 HN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPE 193
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKPIEAR 273
+ G +K DV++ GV+L LL+G P +
Sbjct: 194 VLR-GTYDEKCDVWSAGVILYILLSGTPPFYGK 225
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR--YKVALGIA 175
N+V L+G C P L +I ++ G+L +L K+ N +P+ YK L +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKPEDLYKDFLTLE 148
Query: 176 ESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 149 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 229 TVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++APE + ++DV++FGV+L E+ + G P ++ E
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 109/232 (46%), Gaps = 23/232 (9%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 33 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 92
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR---YKVALGI 174
N+V L+G C P L +I ++ G+L +L K+ N +P+ YK L +
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKTPEDLYKDFLTL 147
Query: 175 AESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLC 227
+ Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++APE + ++DV++FGV+L E+ + G P ++ E
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 17/211 (8%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNI 119
+F K LG G VFK +A K + E K + + REL + + P I
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 120 VPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
V G F D E + + +++ GGSL++ L KK G +P + KV++ + + +
Sbjct: 70 VGFYGAFYSDGE--ISICMEHMDGGSLDQVL--KKAG-----RIPEQILGKVSIAVIKGL 120
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
YL + ++HRD+KPSNIL++S+ KLCDFG+ S + + GT Y++
Sbjct: 121 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDEMANEFVGTRSYMS 174
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
PE Q S ++D+++ G+ L+E+ GR P
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 126
VLG+G V+ G+ + +AIK + + D S+ E+ + L H NIV +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 127 IDPEQGLFLIY-KYVSGGSLERHLHEKKKGVRGN-STLPWSVRYKVALGIAESVAYLHNG 184
E G I+ + V GGSL L K ++ N T+ + + I E + YLH+
Sbjct: 89 --SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLHDN 141
Query: 185 TERCVVHRDIKPSNILLSS-KKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+VHRDIK N+L+++ + K+ DFG T + +T GT Y+APE
Sbjct: 142 Q---IVHRDIKGDNVLINTYSGVLKISDFG--TSKRLAGINPCTETFTGTLQYMAPEIID 196
Query: 244 HGK--VSDKTDVYAFGVVLLELLTGRKPI 270
G D+++ G ++E+ TG+ P
Sbjct: 197 KGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPL 122
RVLG+G+ V K + A+K + K + K ++ RE+ + L HPNI L
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 123 VGFCIDPEQGLF-LIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
F D +G F L+ + +GG L + +K+ ++ ++ + + Y
Sbjct: 92 YEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-------RIIRQVLSGITYX 142
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
H +VHRD+KP N+LL SK ++ DFGL+T A K GT Y+A
Sbjct: 143 HKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---XKDKIGTAYYIA 196
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
PE HG +K DV++ GV+L LL+G P
Sbjct: 197 PEVL-HGTYDEKCDVWSTGVILYILLSGCPPF 227
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 121/260 (46%), Gaps = 24/260 (9%)
Query: 22 DSRAQELKWRKIQSLERSISPVANSLIR---LSYGEILAATHNFSKGRVLGRGALSFVFK 78
D + L ++ + S+ S +P SL+ + A + F LGRGA S V++
Sbjct: 12 DLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYR 71
Query: 79 GKVGLLRTSVAIKRLDKE-DKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIY 137
K + A+K L K DK+ + E+ + L HPNI+ L P + + L+
Sbjct: 72 CKQKGTQKPYALKVLKKTVDKKIVRT---EIGVLLRLSHPNIIKLKEIFETPTE-ISLVL 127
Query: 138 KYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPS 197
+ V+GG L + EK G +V+ I E+VAYLH E +VHRD+KP
Sbjct: 128 ELVTGGELFDRIVEK--GYYSERDAADAVK-----QILEAVAYLH---ENGIVHRDLKPE 177
Query: 198 NILLSSKKIP---KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVY 254
N+L ++ K+ DFGL+ L KTV GT GY APE + + D++
Sbjct: 178 NLLYATPAPDAPLKIADFGLSKIVEHQ---VLMKTVCGTPGYCAPEILRGCAYGPEVDMW 234
Query: 255 AFGVVLLELLTGRKPIEARR 274
+ G++ LL G +P R
Sbjct: 235 SVGIITYILLCGFEPFYDER 254
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 22/213 (10%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPLV 123
+LG+G+ V K K + + A+K ++K ++K++S RE+ + L HPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLF 87
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
++ +++ + +GG L + ++K+ ++ ++ + + Y+H
Sbjct: 88 EI-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFSGITYMHK 139
Query: 184 GTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
+VHRD+KP NILL SK+ K+ DFGL+T + K GT Y+APE
Sbjct: 140 HN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPE 193
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKPIEAR 273
+ G +K DV++ GV+L LL+G P +
Sbjct: 194 VLR-GTYDEKCDVWSAGVILYILLSGTPPFYGK 225
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+ RLD E + RE+ + L+HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 64 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 114 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 168
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSLHHPN 118
NF K +G G V+K + L VA+ RLD E + RE+ + L+HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL---PWSVRYKVALGIA 175
IV L+ I E L+L++++ LH+ K S L P + +
Sbjct: 63 IVKLLD-VIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +A+ H+ V+HRD+KP N+L++++ KL DFGLA P + + V T
Sbjct: 113 QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 167
Query: 236 YLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGR 267
Y APE K S D+++ G + E++T R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V++G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++I ++++ G+L +L E + L + +A I+ ++ YL ++
Sbjct: 326 R-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLE---KK 376
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HR++ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 377 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 429
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
+ K S K+DV+AFGV+L E+ T
Sbjct: 430 LAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 126
VLG+G V+ G+ + +AIK + + D S+ E+ + L H NIV +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 127 IDPEQGLFLIY-KYVSGGSLERHLHEKKKGVRGN-STLPWSVRYKVALGIAESVAYLHNG 184
E G I+ + V GGSL L K ++ N T+ + + I E + YLH+
Sbjct: 75 --SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLHDN 127
Query: 185 TERCVVHRDIKPSNILLSS-KKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+VHRDIK N+L+++ + K+ DFG T + +T GT Y+APE
Sbjct: 128 Q---IVHRDIKGDNVLINTYSGVLKISDFG--TSKRLAGINPCTETFTGTLQYMAPEIID 182
Query: 244 HGK--VSDKTDVYAFGVVLLELLTGRKPI 270
G D+++ G ++E+ TG+ P
Sbjct: 183 KGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 20/225 (8%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELMIASSLHH 116
NF RVLG+G+ V +V A+K L K+ D + + +++ + +H
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P + L C LF + ++V+GG L H+ + ++ + A I
Sbjct: 84 PFLTQLFC-CFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-------YAAEIIS 135
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGY 236
++ +LH+ + +++RD+K N+LL + KL DFG+ V T GT Y
Sbjct: 136 ALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV--TTATFCGTPDY 190
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENL 281
+APE Q D +A GV+L E+L G P EA + E++L
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA---ENEDDL 232
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 90 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 141
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S + GT Y+
Sbjct: 142 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 198
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 240
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAF-CRELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 144
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 145 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 202 SPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRA----GNEGLIF 243
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
N+V L+G C P L +I ++ G+L +L K+ N +P+ YK L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-----NEFVPYKDLYKDFLTLEHL 146
Query: 178 VAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 230
+ Y + G E R +HRD+ NILLS K + K+ DFGLA
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 231 KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++APE + ++DV++FGV+L E+ + G P ++ E
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 255
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAF-CRELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 94 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 145
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S + GT Y+
Sbjct: 146 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 202
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 244
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 16/229 (6%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
N+V L+G C P L +I ++ G+L +L K+ P + YK L +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDL-YKDFLTLEHL 152
Query: 178 VAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 230
+ Y + G E R +HRD+ NILLS K + K+CDFGLA
Sbjct: 153 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 231 KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++APE + ++DV++FGV+L E+ + G P ++ E
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 261
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 144
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 145 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEGLIF 243
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 142
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 143 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYV 199
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 241
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 75 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 126
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 127 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 183
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 225
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 90 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 141
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 142 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 198
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 240
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 142
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 143 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 241
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 142
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 143 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 241
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 23 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNS-TLPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y++ GSL L KG G LP V ++ IA +AY+
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFL----KGETGKYLRLPQLV--DMSAQIASGMAYVERMN- 131
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGLA WT+ F K + APE
Sbjct: 132 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK-------WTAPE 182
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 144
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 145 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 243
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTS----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVP 121
R LG+G V + L+ + VA+K+L +E + F RE+ I SL H NIV
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 122 LVGFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
G C + L LI +++ GSL +L + K+ + L ++ + I + + Y
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQ------ICKGMEY 132
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAP 239
L GT+R +HRD+ NIL+ ++ K+ DFGL K + + AP
Sbjct: 133 L--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 240 EYFQHGKVSDKTDVYAFGVVLLELLT 265
E K S +DV++FGVVL EL T
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTS----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
LG+G V + L+ + VA+K+L +E + F RE+ I SL H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 124 GFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
G C + L LI +Y+ GSL +L + K+ + L ++ + I + + YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL- 133
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEY 241
GT+R +HRD+ NIL+ ++ K+ DFGL K + + APE
Sbjct: 134 -GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
K S +DV++FGVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 144
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 145 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 243
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAF-CRELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 94 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 145
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 146 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 202
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 244
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTS----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
LG+G V + L+ + VA+K+L +E + F RE+ I SL H NIV
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 124 GFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
G C + L LI +Y+ GSL +L + K+ + L ++ + I + + YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL- 129
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEY 241
GT+R +HRD+ NIL+ ++ K+ DFGL K + + APE
Sbjct: 130 -GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
K S +DV++FGVVL EL T
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTS----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
LG+G V + L+ + VA+K+L +E + F RE+ I SL H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 124 GFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
G C + L LI +Y+ GSL +L + K+ + L ++ + I + + YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL- 130
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEY 241
GT+R +HRD+ NIL+ ++ K+ DFGL K + + APE
Sbjct: 131 -GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
K S +DV++FGVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTS----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
LG+G V + L+ + VA+K+L +E + F RE+ I SL H NIV
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 124 GFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
G C + L LI +Y+ GSL +L + K+ + L ++ + I + + YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL- 135
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEY 241
GT+R +HRD+ NIL+ ++ K+ DFGL K + + APE
Sbjct: 136 -GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
K S +DV++FGVVL EL T
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAF-CRELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 144
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 145 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 243
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 132/301 (43%), Gaps = 44/301 (14%)
Query: 52 YGEILAATHNFSKGRVLGRGALSFVFKGKVGL---LRTSVAIKRLDKEDKESSK-AFCRE 107
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 167
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 147
Query: 168 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVP 224
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGLA P
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA 204
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVL 283
+ + K + +PE + K + +DV+++G+VL E+++ G +P Q
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV----- 259
Query: 284 WAKPILHRGMAAVEE--LLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAI 341
+ AV+E L P + C + C + + RP E+I++I
Sbjct: 260 ---------IKAVDEGYRLPPPMDCPA-------ALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 342 L 342
L
Sbjct: 304 L 304
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 69 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 120
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 121 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 219
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTS----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
LG+G V + L+ + VA+K+L +E + F RE+ I SL H NIV
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 124 GFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
G C + L LI +Y+ GSL +L + K+ + L ++ + I + + YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL- 137
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEY 241
GT+R +HRD+ NIL+ ++ K+ DFGL K + + APE
Sbjct: 138 -GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
K S +DV++FGVVL EL T
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTS----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
LG+G V + L+ + VA+K+L +E + F RE+ I SL H NIV
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 124 GFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
G C + L LI +Y+ GSL +L + K+ + L ++ + I + + YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL- 134
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEY 241
GT+R +HRD+ NIL+ ++ K+ DFGL K + + APE
Sbjct: 135 -GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
K S +DV++FGVVL EL T
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTS----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
LG+G V + L+ + VA+K+L +E + F RE+ I SL H NIV
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 124 GFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
G C + L LI +Y+ GSL +L + K+ + L ++ + I + + YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL- 136
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEY 241
GT+R +HRD+ NIL+ ++ K+ DFGL K + + APE
Sbjct: 137 -GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
K S +DV++FGVVL EL T
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTS----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
LG+G V + L+ + VA+K+L +E + F RE+ I SL H NIV
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 124 GFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
G C + L LI +Y+ GSL +L + K+ + L ++ + I + + YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL- 128
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEY 241
GT+R +HRD+ NIL+ ++ K+ DFGL K + + APE
Sbjct: 129 -GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
K S +DV++FGVVL EL T
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 68 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 119
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 120 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 218
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 31/222 (13%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKED----KESSKAFCREL 108
+ +F R LG G+ G+V L+R+ A+K L KE K+ L
Sbjct: 4 SLQDFQILRTLGTGSF-----GRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERL 58
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
M+ S + HP I+ + G D +Q +F+I Y+ GG L L R + P V
Sbjct: 59 ML-SIVTHPFIIRMWGTFQDAQQ-IFMIMDYIEGGELFSLL-------RKSQRFPNPVAK 109
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
A + ++ YLH+ + +++RD+KP NILL K+ DFG A + VP +
Sbjct: 110 FYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTY 161
Query: 229 TVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
+ GT Y+APE + D ++FG+++ E+L G P
Sbjct: 162 XLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 96 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 147
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 148 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 204
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 205 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 246
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 11/180 (6%)
Query: 88 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 146
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 147 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 206
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 170
Query: 207 PKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
K+ DFGL K + + APE K S +DV++FGVVL EL T
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G +VA+K L KED + F +E + + HPN+V L+G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E +++ +Y+ G+L +L E + + V +A I+ ++ YL ++
Sbjct: 99 -LEPPFYIVTEYMPYGNLLDYLRECNR-----EEVTAVVLLYMATQISSAMEYLE---KK 149
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L+ + K+ DFGL+ T+T+ F K + APE
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPES 202
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ S K+DV+AFGV+L E+ T G P
Sbjct: 203 LAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 70 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 121
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 122 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 220
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 11/180 (6%)
Query: 88 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 146
VA+K+L +E + F RE+ I SL H NIV G C + L LI +Y+ GSL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 147 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 206
+L + K+ + L ++ + I + + YL GT+R +HRD+ NIL+ ++
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKR-YIHRDLATRNILVENENR 170
Query: 207 PKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
K+ DFGL K + + APE K S +DV++FGVVL EL T
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTS----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
LG+G V + L+ + VA+K+L +E + F RE+ I SL H NIV
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 124 GFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
G C + L LI +Y+ GSL +L + K+ + L ++ + I + + YL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL- 161
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEY 241
GT+R +HRD+ NIL+ ++ K+ DFGL K + + APE
Sbjct: 162 -GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
K S +DV++FGVVL EL T
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFC-RELMIASSLHHP 117
+F G++LG G+ S V + AIK L+K KE+ + RE + S L HP
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 71 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 122
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 123 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 221
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTS----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
LG+G V + L+ + VA+K+L +E + F RE+ I SL H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 124 GFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
G C + L LI +Y+ GSL +L + K+ + L ++ + I + + YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL- 130
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEY 241
GT+R +HRD+ NIL+ ++ K+ DFGL K + + APE
Sbjct: 131 -GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
K S +DV++FGVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTS----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
LG+G V + L+ + VA+K+L +E + F RE+ I SL H NIV
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 124 GFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
G C + L LI +Y+ GSL +L + K+ + L ++ + I + + YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL- 131
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEY 241
GT+R +HR++ NIL+ ++ K+ DFGL + K + + APE
Sbjct: 132 -GTKR-YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
K S +DV++FGVVL EL T
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 49 RLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRE 107
R E + ++F VLG GA S V + + VAIK + KE E + + E
Sbjct: 9 RWKQAEDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQG--LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS 165
+ + + HPNIV L E G L+LI + VSGG L + EK +++
Sbjct: 67 IAVLHKIKHPNIVALDDIY---ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---- 119
Query: 166 VRYKVALGIAESVAYLHNGTERCVVHRDIKPSNIL---LSSKKIPKLCDFGLATWTSAPS 222
++ + ++V YLH+ +VHRD+KP N+L L + DFGL+ S
Sbjct: 120 ---RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
V T GT GY+APE S D ++ GV+ LL G P
Sbjct: 174 V---LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 85 RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGG 143
+ VAIK L + +K ++ RE I L +P IV L+G C + L L+ + GG
Sbjct: 37 QIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC--QAEALMLVMEMAGGG 94
Query: 144 SLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSS 203
L + L K++ + ++ + ++V++G+ YL E+ VHRD+ N+LL +
Sbjct: 95 PLHKFLVGKREEIPVSNVA--ELLHQVSMGMK----YLE---EKNFVHRDLAARNVLLVN 145
Query: 204 KKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLE 262
+ K+ DFGL+ A + ++ K + APE K S ++DV+++GV + E
Sbjct: 146 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 205
Query: 263 LLT-GRKPIEARRLQGEENLVL 283
L+ G+KP ++++G E +
Sbjct: 206 ALSYGQKPY--KKMKGPEVMAF 225
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 49 RLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRE 107
R E + ++F VLG GA S V + + VAIK + KE E + + E
Sbjct: 9 RWKQAEDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQG--LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS 165
+ + + HPNIV L E G L+LI + VSGG L + EK +++
Sbjct: 67 IAVLHKIKHPNIVALDDIY---ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---- 119
Query: 166 VRYKVALGIAESVAYLHNGTERCVVHRDIKPSNIL---LSSKKIPKLCDFGLATWTSAPS 222
++ + ++V YLH+ +VHRD+KP N+L L + DFGL+ S
Sbjct: 120 ---RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
V T GT GY+APE S D ++ GV+ LL G P
Sbjct: 174 V---LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 44/301 (14%)
Query: 52 YGEILAATHNFSKGRVLGRGALSFVFKGKVGL---LRTSVAIKRLDKEDKESSK-AFCRE 107
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 167
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 68 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 118
Query: 168 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVP 224
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+ P
Sbjct: 119 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVL 283
+ + K + +PE + K + +DV+++G+VL E+++ G +P Q
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV----- 230
Query: 284 WAKPILHRGMAAVEE--LLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAI 341
+ AV+E L P + C + C + + RP E+I++I
Sbjct: 231 ---------IKAVDEGYRLPPPMDCPA-------ALYQLMLDCWQKDRNNRPKFEQIVSI 274
Query: 342 L 342
L
Sbjct: 275 L 275
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 49 RLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRE 107
R E + ++F VLG GA S V + + VAIK + KE E + + E
Sbjct: 9 RWKQAEDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQG--LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS 165
+ + + HPNIV L E G L+LI + VSGG L + EK +++
Sbjct: 67 IAVLHKIKHPNIVALDDIY---ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---- 119
Query: 166 VRYKVALGIAESVAYLHNGTERCVVHRDIKPSNIL---LSSKKIPKLCDFGLATWTSAPS 222
++ + ++V YLH+ +VHRD+KP N+L L + DFGL+ S
Sbjct: 120 ---RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
V T GT GY+APE S D ++ GV+ LL G P
Sbjct: 174 V---LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 26/209 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 16 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 71
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 72 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 123
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD++ +NIL+S K+ DFGLA +T+ F K + APE
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-------WTAPEA 176
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G + K+DV++FG++L E++T GR P
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 192 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 128 DPEQGLFLIYKYVSGGSLERHLH-EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S GSL L E K +R LP V +A IA +AY+
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLR----LPQLV--DMAAQIASGMAYVERMN- 300
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGLA +T+ F K + APE
Sbjct: 301 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPE 351
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 44/301 (14%)
Query: 52 YGEILAATHNFSKGRVLGRGALSFVFKGKVGL---LRTSVAIKRLDKEDKESSK-AFCRE 107
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 167
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 147
Query: 168 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVP 224
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+ P
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVL 283
+ + K + +PE + K + +DV+++G+VL E+++ G +P Q
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV----- 259
Query: 284 WAKPILHRGMAAVEE--LLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAI 341
+ AV+E L P + C + C + + RP E+I++I
Sbjct: 260 ---------IKAVDEGYRLPPPMDCPA-------ALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 342 L 342
L
Sbjct: 304 L 304
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 192 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 128 DPEQGLFLIYKYVSGGSLERHLH-EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S GSL L E K +R LP V +A IA +AY+
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLR----LPQLV--DMAAQIASGMAYVERMN- 300
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGLA +T+ F K + APE
Sbjct: 301 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPE 351
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 26/209 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 26 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 81
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 82 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 133
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD++ +NIL+S K+ DFGLA +T+ F K + APE
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-------WTAPEA 186
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G + K+DV++FG++L E++T GR P
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 18/226 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAF-CRELMIASSLHHP 117
+F G++LG G+ S + AIK L+K KE+ + RE + S L HP
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
V L F ++ L+ Y G L +++ +K G + R+ A I +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET----CTRFYTA-EIVSA 142
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH + ++HRD+KP NILL+ ++ DFG A S S GT Y+
Sbjct: 143 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+PE +D++A G ++ +L+ G P A G E L+
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIF 241
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 44/301 (14%)
Query: 52 YGEILAATHNFSKGRVLGRGALSFVFKGKVGL---LRTSVAIKRLDKEDKESSK-AFCRE 107
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 36 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 94
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 167
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 95 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 145
Query: 168 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVP 224
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+ P
Sbjct: 146 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 202
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVL 283
+ + K + +PE + K + +DV+++G+VL E+++ G +P Q
Sbjct: 203 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV----- 257
Query: 284 WAKPILHRGMAAVEE--LLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAI 341
+ AV+E L P + C + C + + RP E+I++I
Sbjct: 258 ---------IKAVDEGYRLPPPMDCPA-------ALYQLMLDCWQKDRNNRPKFEQIVSI 301
Query: 342 L 342
L
Sbjct: 302 L 302
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 44/301 (14%)
Query: 52 YGEILAATHNFSKGRVLGRGALSFVFKGKVGL---LRTSVAIKRLDKEDKESSK-AFCRE 107
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 167
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 147
Query: 168 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVP 224
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+ P
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVL 283
+ + K + +PE + K + +DV+++G+VL E+++ G +P Q
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV----- 259
Query: 284 WAKPILHRGMAAVEE--LLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAI 341
+ AV+E L P + C + C + + RP E+I++I
Sbjct: 260 ---------IKAVDEGYRLPPPMDCPA-------ALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 342 L 342
L
Sbjct: 304 L 304
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 26/209 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 21 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 128
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD++ +NIL+S K+ DFGLA +T+ F K + APE
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-------WTAPEA 181
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G + K+DV++FG++L E++T GR P
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 44/301 (14%)
Query: 52 YGEILAATHNFSKGRVLGRGALSFVFKGKVGL---LRTSVAIKRLDKEDKESSK-AFCRE 107
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 167
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 147
Query: 168 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVP 224
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+ P
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVL 283
+ + K + +PE + K + +DV+++G+VL E+++ G +P Q
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV----- 259
Query: 284 WAKPILHRGMAAVEE--LLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAI 341
+ AV+E L P + C + C + + RP E+I++I
Sbjct: 260 ---------IKAVDEGYRLPPPMDCPA-------ALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 342 L 342
L
Sbjct: 304 L 304
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 44/301 (14%)
Query: 52 YGEILAATHNFSKGRVLGRGALSFVFKGKVGL---LRTSVAIKRLDKEDKESSK-AFCRE 107
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 167
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 147
Query: 168 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVP 224
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+ P
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVL 283
+ + K + +PE + K + +DV+++G+VL E+++ G +P Q
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV----- 259
Query: 284 WAKPILHRGMAAVEE--LLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAI 341
+ AV+E L P + C + C + + RP E+I++I
Sbjct: 260 ---------IKAVDEGYRLPPPMDCPA-------ALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 342 L 342
L
Sbjct: 304 L 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 44/301 (14%)
Query: 52 YGEILAATHNFSKGRVLGRGALSFVFKGKVGL---LRTSVAIKRLDKEDKESSK-AFCRE 107
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 167
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 147
Query: 168 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVP 224
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+ P
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVL 283
+ + K + +PE + K + +DV+++G+VL E+++ G +P Q
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV----- 259
Query: 284 WAKPILHRGMAAVEE--LLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAI 341
+ AV+E L P + C + C + + RP E+I++I
Sbjct: 260 ---------IKAVDEGYRLPPPMDCPA-------ALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 342 L 342
L
Sbjct: 304 L 304
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 26/209 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 27 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 82
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 83 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 134
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD++ +NIL+S K+ DFGLA +T+ F K + APE
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-------WTAPEA 187
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G + K+DV++FG++L E++T GR P
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 44/301 (14%)
Query: 52 YGEILAATHNFSKGRVLGRGALSFVFKGKVGL---LRTSVAIKRLDKEDKESSK-AFCRE 107
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 26 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 84
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 167
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 85 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 135
Query: 168 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVP 224
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+ P
Sbjct: 136 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 192
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVL 283
+ + K + +PE + K + +DV+++G+VL E+++ G +P Q
Sbjct: 193 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV----- 247
Query: 284 WAKPILHRGMAAVEE--LLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAI 341
+ AV+E L P + C + C + + RP E+I++I
Sbjct: 248 ---------IKAVDEGYRLPPPMDCPA-------ALYQLMLDCWQKDRNNRPKFEQIVSI 291
Query: 342 L 342
L
Sbjct: 292 L 292
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 26/209 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 31 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 86
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 87 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 138
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD++ +NIL+S K+ DFGLA +T+ F K + APE
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-------WTAPEA 191
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G + K+DV++FG++L E++T GR P
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGLA +T+ F K + APE
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPE 185
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 104/232 (44%), Gaps = 43/232 (18%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+F + ++G G VFK K + + I+R+ K +++ RE+ + L H NIV
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV----KYNNEKAEREVKALAKLDHVNIV 68
Query: 121 PL----VGFCIDPEQG------------------------LFLIYKYVSGGSLERHLHEK 152
GF DPE LF+ ++ G+LE+ + EK
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EK 127
Query: 153 KKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDF 212
++G + + L + ++ G V Y+H+ + ++HRD+KPSNI L K K+ DF
Sbjct: 128 RRGEKLDKVLALELFEQITKG----VDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 213 GLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELL 264
GL T KGT Y++PE + D+YA G++L ELL
Sbjct: 181 GLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 16/222 (7%)
Query: 60 HNFSKGRVLGRGALSFVFKGKVGLL-----RTSVAIKRLDKEDKESSKAFCRELMIASSL 114
HN R LG GA VF + L + VA+K L + K F RE + ++L
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKG----VRGN--STLPWSVRY 168
H +IV G C++ + L ++++Y+ G L + L GN + L S
Sbjct: 73 QHEHIVKFYGVCVEGDP-LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+A IA + YL + VHRD+ N L+ + K+ DFG++ + +
Sbjct: 132 HIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG 188
Query: 229 TVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
++ PE + K + ++DV++ GVVL E+ T G++P
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNS-TLPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGLA +T+ F K + APE
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPE 185
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 17 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 72
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 125
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGLA +T+ F K + APE
Sbjct: 126 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPE 176
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 19 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 74
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFL----KGETGKYLRLPQLV--DMAAQIASGMAYVERMN- 127
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGLA +T+ F K + APE
Sbjct: 128 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPE 178
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 131/301 (43%), Gaps = 44/301 (14%)
Query: 52 YGEILAATHNFSKGRVLGRGALSFVFKGKVGL---LRTSVAIKRLDKEDKESSK-AFCRE 107
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 167
I HPNI+ L G + + + ++ +Y+ GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVI 147
Query: 168 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVP 224
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL P
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVL 283
+ + K + +PE + K + +DV+++G+VL E+++ G +P Q
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV----- 259
Query: 284 WAKPILHRGMAAVEE--LLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAI 341
+ AV+E L P + C + C + + RP E+I++I
Sbjct: 260 ---------IKAVDEGYRLPPPMDCPA-------ALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 342 L 342
L
Sbjct: 304 L 304
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 192 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 128 DPEQGLFLIYKYVSGGSLERHLH-EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S GSL L E K +R LP V +A IA +AY+
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETGKYLR----LPQLV--DMAAQIASGMAYVERMN- 300
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGLA +T+ F K + APE
Sbjct: 301 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPE 351
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 15 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 70
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 123
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGLA +T+ F K + APE
Sbjct: 124 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPE 174
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE-SSKAFCRELMIASSLHHPNI 119
+F + LGRG VF+ K + + AIKR+ ++E + + RE+ + L HP I
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 120 VPLVGFCIDPEQGLFL------IYKYVSGGSLERHLHEKKKGVRGNSTLP---WSVRYKV 170
V ++ L +Y Y+ + K + G T+ SV +
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKE--NLKDWMNGRCTIEERERSVCLHI 123
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT-----------WTS 219
L IAE+V +LH+ + ++HRD+KPSNI + + K+ DFGL T T
Sbjct: 124 FLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 220 APSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELL 264
P+ V GT Y++PE S K D+++ G++L ELL
Sbjct: 181 MPAYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGLA +T+ F K + APE
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPE 185
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 30/211 (14%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 275 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 330
Query: 128 DPEQGLFLIYKYVSGGSLERHLH-EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S GSL L E K +R LP V +A IA +AY+ E
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLR----LPQLV--DMAAQIASGMAYV----E 380
Query: 187 RC-VVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAP 239
R VHRD++ +NIL+ + K+ DFGLA +T+ F K + AP
Sbjct: 381 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAP 433
Query: 240 EYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
E +G+ + K+DV++FG++L EL T GR P
Sbjct: 434 EAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 17/209 (8%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
NF K +G G+ V VA+K++D ++ + E++I HH N+V
Sbjct: 49 NFIK---IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVV 105
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
+ + ++ L+++ +++ GG+L + + +T V L + +++Y
Sbjct: 106 DMYSSYLVGDE-LWVVMEFLEGGALTDIVTHTRMNEEQIAT--------VCLSVLRALSY 156
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
LHN + V+HRDIK +ILL+S KL DFG S VP K + GT ++APE
Sbjct: 157 LHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-EVP-KRKXLVGTPYWMAPE 211
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
+ D+++ G++++E++ G P
Sbjct: 212 VISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 18/217 (8%)
Query: 59 THNFSKGRVLGRGALSFVFK--GKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH 116
T ++ LG+GA S V + K + I K + RE I L H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
PNIV L I E +L++ V+GG L + ++ +++ I E
Sbjct: 90 PNIVRLHD-SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-------HCIHQILE 141
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
SV ++H + +VHRD+KP N+LL+SK KL DFGLA + GT
Sbjct: 142 SVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF--GFAGT 196
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GYL+PE + D++A GV+L LL G P
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 66 RVLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVP 121
RV+G+G V+ G+ R AIK L + + + +AF RE ++ L+HPN++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L+G + PE ++ Y+ G L + + ++ N T+ + + L +A + YL
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR----NPTVKDLISF--GLQVARGMEYL 140
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFG 235
E+ VHRD+ N +L K+ DFGLA + S VK T
Sbjct: 141 ---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT-- 195
Query: 236 YLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
A E Q + + K+DV++FGV+L ELLT P
Sbjct: 196 --ALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 60 HNFSKGRVLGRGALSFVFKGKV-GLLRTSVAIK---RLDKEDKESSK--AFCRELMIASS 113
N G+VLG GA V G+ +T V+I+ ++ KE +SS+ A EL + +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 114 L-HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGN------------- 159
L H NIV L+G C ++LI++Y G L +L K++ +
Sbjct: 105 LGSHENIVNLLGACT-LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 160 ---STLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 216
+ L + A +A+ + +L + VHRD+ N+L++ K+ K+CDFGLA
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLAR 220
Query: 217 WTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
+ S + + ++APE G + K+DV+++G++L E+ +
Sbjct: 221 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + + H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAV 81
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNS-TLPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGLA +T+ F K + APE
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPE 185
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 104/210 (49%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD+ +NIL+ + K+ DFGLA +T+ F K + APE
Sbjct: 135 --YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPE 185
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 12/215 (5%)
Query: 56 LAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASS 113
++++ F + LG G + V+KG VA+K +LD E+ S A RE+ +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTA-IREISLMKE 59
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
L H NIV L I E L L+++++ L++++ + G V+Y
Sbjct: 60 LKHENIVRLYD-VIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKY-FQWQ 116
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+ + +A+ H E ++HRD+KP N+L++ + KL DFGLA P F + V T
Sbjct: 117 LLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--T 171
Query: 234 FGYLAPEYFQHGKV-SDKTDVYAFGVVLLELLTGR 267
Y AP+ + S D+++ G +L E++TG+
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 11/180 (6%)
Query: 88 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 146
VA+K+L + + F RE+ I +LH IV G P Q L L+ +Y+ G L
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114
Query: 147 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 206
L + + + L +S + I + + YL G+ RCV HRD+ NIL+ S+
Sbjct: 115 DFLQRHRARLDASRLLLYSSQ------ICKGMEYL--GSRRCV-HRDLAARNILVESEAH 165
Query: 207 PKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
K+ DFGLA ++ + + + APE S ++DV++FGVVL EL T
Sbjct: 166 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 11/180 (6%)
Query: 88 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 146
VA+K+L + + F RE+ I +LH IV G P Q L L+ +Y+ G L
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 101
Query: 147 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 206
L + + + L +S + I + + YL G+ RCV HRD+ NIL+ S+
Sbjct: 102 DFLQRHRARLDASRLLLYSSQ------ICKGMEYL--GSRRCV-HRDLAARNILVESEAH 152
Query: 207 PKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
K+ DFGLA ++ + + + APE S ++DV++FGVVL EL T
Sbjct: 153 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 21 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 128
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV 247
+HRD++ +NIL+S K+ DFGLA + K + APE +G
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINYGTF 187
Query: 248 SDKTDVYAFGVVLLELLT-GRKP 269
+ K+DV++FG++L E++T GR P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 22 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 77
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 78 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 129
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV 247
+HRD++ +NIL+S K+ DFGLA + K + APE +G
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINYGTF 188
Query: 248 SDKTDVYAFGVVLLELLT-GRKP 269
+ K+DV++FG++L E++T GR P
Sbjct: 189 TIKSDVWSFGILLTEIVTHGRIP 211
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGK 246
VHRD++ +NIL+ + K+ DFGLA + K + APE +G+
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAALYGR 191
Query: 247 VSDKTDVYAFGVVLLELLT-GRKP 269
+ K+DV++FG++L EL T GR P
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 193 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAV 248
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNS-TLPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 301
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGL +T+ F K + APE
Sbjct: 302 --YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIK-------WTAPE 352
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 353 AALYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTS----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
LG+G V + L+ + VA+K+L +E + F RE+ I SL H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 124 GFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
G C + L LI +Y+ GSL +L + + L ++ + I + + YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQ------ICKGMEYL- 133
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEY 241
GT+R +HRD+ NIL+ ++ K+ DFGL K + + APE
Sbjct: 134 -GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT 265
K S +DV++FGVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K S +AF E + +L H +V L +
Sbjct: 21 LGAGQFGEVWMGYYNN-STKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYA-VV 77
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E+ +++I +Y++ GSL L K G LP + + IAE +AY+ +
Sbjct: 78 TREEPIYIITEYMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQ--IAEGMAYIER---K 129
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD++ +N+L+S + K+ DFGLA +T+ F K + APE
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK-------WTAPEA 182
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKPIEAR 273
G + K+DV++FG++L E++T G+ P R
Sbjct: 183 INFGCFTIKSDVWSFGILLYEIVTYGKIPYPGR 215
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 11/180 (6%)
Query: 88 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLE 146
VA+K+L + + F RE+ I +LH IV G P Q L L+ +Y+ G L
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 102
Query: 147 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 206
L + + + L +S + I + + YL G+ RCV HRD+ NIL+ S+
Sbjct: 103 DFLQRHRARLDASRLLLYSSQ------ICKGMEYL--GSRRCV-HRDLAARNILVESEAH 153
Query: 207 PKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
K+ DFGLA ++ + + + APE S ++DV++FGVVL EL T
Sbjct: 154 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDK---EDKESSKAFCRELMIASSLHHPNIVPLV 123
VLG GA S V + + VAIK + K E KE S E+ + + HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME--NEIAVLHKIKHPNIVALD 82
Query: 124 GFCIDPEQG--LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
E G L+LI + VSGG L + EK +++ ++ + ++V YL
Sbjct: 83 DIY---ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-------RLIFQVLDAVKYL 132
Query: 182 HNGTERCVVHRDIKPSNIL---LSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
H+ +VHRD+KP N+L L + DFGL+ SV T GT GY+A
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTACGTPGYVA 186
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
PE S D ++ GV+ LL G P
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 21 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 128
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV 247
+HRD++ +NIL+S K+ DFGLA + K + APE +G
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINYGTF 187
Query: 248 SDKTDVYAFGVVLLELLT-GRKP 269
+ K+DV++FG++L E++T GR P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 26/209 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 17 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 72
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 73 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 124
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HR+++ +NIL+S K+ DFGLA +T+ F K + APE
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-------WTAPEA 177
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G + K+DV++FG++L E++T GR P
Sbjct: 178 INYGTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 23 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 78
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 79 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 130
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV 247
+HRD++ +NIL+S K+ DFGLA + K + APE +G
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINYGTF 189
Query: 248 SDKTDVYAFGVVLLELLT-GRKP 269
+ K+DV++FG++L E++T GR P
Sbjct: 190 TIKSDVWSFGILLTEIVTHGRIP 212
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 27 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 82
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 83 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 134
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV 247
+HRD++ +NIL+S K+ DFGLA + K + APE +G
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINYGTF 193
Query: 248 SDKTDVYAFGVVLLELLT-GRKP 269
+ K+DV++FG++L E++T GR P
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 30 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 85
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 86 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 137
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV 247
+HRD++ +NIL+S K+ DFGLA + K + APE +G
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINYGTF 196
Query: 248 SDKTDVYAFGVVLLELLT-GRKP 269
+ K+DV++FG++L E++T GR P
Sbjct: 197 TIKSDVWSFGILLTEIVTHGRIP 219
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 29 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 84
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 85 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 136
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV 247
+HRD++ +NIL+S K+ DFGLA + K + APE +G
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINYGTF 195
Query: 248 SDKTDVYAFGVVLLELLT-GRKP 269
+ K+DV++FG++L E++T GR P
Sbjct: 196 TIKSDVWSFGILLTEIVTHGRIP 218
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 26/238 (10%)
Query: 41 SPVANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKES 100
S A S L YG + + + LG G V GK + VAIK + KE S
Sbjct: 5 SKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMI-KEGSMS 62
Query: 101 SKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNS 160
F E + +L H +V L G C ++ +F+I +Y++ G L +L E + +
Sbjct: 63 EDEFIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYMANGCLLNYLREMRHRFQTQQ 121
Query: 161 TLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA----- 215
L ++ + E++ YL + + +HRD+ N L++ + + K+ DFGL+
Sbjct: 122 LL------EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172
Query: 216 -TWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIE 271
+TS+ F + + PE + K S K+D++AFGV++ E+ + G+ P E
Sbjct: 173 DEYTSSVGSKFPVR-------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S G L L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGLA +T+ F K + APE
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPE 185
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 26/238 (10%)
Query: 41 SPVANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKES 100
S A S L YG + + + LG G V GK + VAIK + KE S
Sbjct: 5 SKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMI-KEGSMS 62
Query: 101 SKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNS 160
F E + +L H +V L G C ++ +F+I +Y++ G L +L E + +
Sbjct: 63 EDEFIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYMANGCLLNYLREMRHRFQTQQ 121
Query: 161 TLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW--- 217
L ++ + E++ YL + + +HRD+ N L++ + + K+ DFGL+ +
Sbjct: 122 LL------EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172
Query: 218 ---TSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIE 271
TS+ F + + PE + K S K+D++AFGV++ E+ + G+ P E
Sbjct: 173 DEETSSVGSKFPVR-------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 18/228 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSK-AFCRELMIASSL 114
N + R LG GA V++G+V + VA+K L + E + F E +I S L
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 105
Query: 115 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 106 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKT 229
IA YL E +HRDI N LL+ ++ K+ DFG+A S
Sbjct: 163 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQ 276
++ PE F G + KTD ++FGV+L E+ + G P ++ Q
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 267
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 18/228 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSK-AFCRELMIASSL 114
N + R LG GA V++G+V + VA+K L + E + F E +I S L
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 91
Query: 115 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 92 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKT 229
IA YL E +HRDI N LL+ ++ K+ DFG+A S
Sbjct: 149 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQ 276
++ PE F G + KTD ++FGV+L E+ + G P ++ Q
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 253
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 23 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNS-TLPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y++ GSL L KG G LP V ++ IA +AY+
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFL----KGETGKYLRLPQLV--DMSAQIASGMAYVERMN- 131
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGLA +T+ F K + APE
Sbjct: 132 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPE 182
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 26/229 (11%)
Query: 50 LSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM 109
L YG + + + LG G V GK + VAIK + KE S F E
Sbjct: 5 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMI-KEGSMSEDEFIEEAK 62
Query: 110 IASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
+ +L H +V L G C ++ +F+I +Y++ G L +L E + + L +
Sbjct: 63 VMMNLSHEKLVQLYGVCT-KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------E 115
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSV 223
+ + E++ YL + + +HRD+ N L++ + + K+ DFGL+ +TS+
Sbjct: 116 MCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 172
Query: 224 PFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIE 271
F + + PE + K S K+D++AFGV++ E+ + G+ P E
Sbjct: 173 KFPVR-------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K+ S AF E + L H +V L + +
Sbjct: 21 LGAGQAGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +++I +Y+ GSL L + G++ L + +A IAE +A++ ER
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL-KTPSGIK----LTINKLLDMAAQIAEGMAFIE---ER 128
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV 247
+HRD++ +NIL+S K+ DFGLA + K + APE +G
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXT-AREGAKFPIKWTAPEAINYGTF 187
Query: 248 SDKTDVYAFGVVLLELLT-GRKP 269
+ K+DV++FG++L E++T GR P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 28/210 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNST-LPWSVRYKVALGIAESVAYLHNGTE 186
E+ ++++ +Y+S G L L KG G LP V +A IA +AY+
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFL----KGEMGKYLRLPQLV--DMAAQIASGMAYVERMN- 134
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRD++ +NIL+ + K+ DFGLA +T+ F K + APE
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPE 185
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+G+ + K+DV++FG++L EL T GR P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 22/234 (9%)
Query: 54 EILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELM 109
+I +F ++LG+G+ VF + AIK L K+ D + + +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 110 IASSLHHPNIVPLVGFC-IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
++ + HP + + FC ++ LF + +Y++GG L H+ K +T
Sbjct: 72 LSLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF------ 123
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
A I + +LH+ + +V+RD+K NILL K+ DFG+
Sbjct: 124 -YAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TN 177
Query: 229 TVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLV 282
GT Y+APE K + D ++FGV+L E+L G+ P Q EE L
Sbjct: 178 EFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG---QDEEELF 228
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKR-LDKEDKESSKAFC-RELMIASSLHHPNIVPLVGF 125
+G G+ VFK + VAIK+ L+ ED K RE+ + L HPN+V L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE- 69
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
++ L L+++Y L HE + RG +P + + ++V + H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVL----HELDRYQRG---VPEHLVKSITWQTLQAVNFCHKHN 122
Query: 186 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF--- 242
+HRD+KP NIL++ + KLCDFG A + PS + + T Y +PE
Sbjct: 123 ---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV--ATRWYRSPELLVGD 177
Query: 243 -QHGKVSDKTDVYAFGVVLLELLTG 266
Q+G DV+A G V ELL+G
Sbjct: 178 TQYGP---PVDVWAIGCVFAELLSG 199
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 131/301 (43%), Gaps = 44/301 (14%)
Query: 52 YGEILAATHNFSKGRVLGRGALSFVFKGKVGL---LRTSVAIKRLDKEDKESSK-AFCRE 107
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 167
I HPNI+ L G + + + ++ + + GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEXMENGSLDSFLRKHDA--------QFTVI 147
Query: 168 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVP 224
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+ P
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVL 283
+ + K + +PE + K + +DV+++G+VL E+++ G +P Q
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV----- 259
Query: 284 WAKPILHRGMAAVEE--LLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAI 341
+ AV+E L P + C + C + + RP E+I++I
Sbjct: 260 ---------IKAVDEGYRLPPPMDCPA-------ALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 342 L 342
L
Sbjct: 304 L 304
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 131/301 (43%), Gaps = 44/301 (14%)
Query: 52 YGEILAATHNFSKGRVLGRGALSFVFKGKVGL---LRTSVAIKRLDKEDKESSK-AFCRE 107
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 167
I HPNI+ L G + + + ++ + + GSL+ L + ++V
Sbjct: 68 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEXMENGSLDSFLRKHDA--------QFTVI 118
Query: 168 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVP 224
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+ P
Sbjct: 119 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVL 283
+ + K + +PE + K + +DV+++G+VL E+++ G +P Q
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV----- 230
Query: 284 WAKPILHRGMAAVEE--LLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAI 341
+ AV+E L P + C + C + + RP E+I++I
Sbjct: 231 ---------IKAVDEGYRLPPPMDCPA-------ALYQLMLDCWQKDRNNRPKFEQIVSI 274
Query: 342 L 342
L
Sbjct: 275 L 275
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 131/301 (43%), Gaps = 44/301 (14%)
Query: 52 YGEILAATHNFSKGRVLGRGALSFVFKGKVGL---LRTSVAIKRLDKEDKESSK-AFCRE 107
+ + L AT N S +V+G G V G++ L SVAIK L E + F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 108 LMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 167
I HPNI+ L G + + + ++ + + GSL+ L + ++V
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEXMENGSLDSFLRKHDA--------QFTVI 147
Query: 168 YKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVP 224
V + GIA + YL ++ VHRD+ NIL++S + K+ DFGL+ P
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVL 283
+ + K + +PE + K + +DV+++G+VL E+++ G +P Q
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV----- 259
Query: 284 WAKPILHRGMAAVEE--LLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAI 341
+ AV+E L P + C + C + + RP E+I++I
Sbjct: 260 ---------IKAVDEGYRLPPPMDCPA-------ALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 342 L 342
L
Sbjct: 304 L 304
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V GK + VA+K + KE S F +E L HP +V G C
Sbjct: 16 LGSGQFGVVKLGKWKG-QYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC- 72
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E ++++ +Y+S G L +L KG+ + L ++ + E +A+L +
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL------EMCYDVCEGMAFLESHQ-- 124
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV 247
+HRD+ N L+ K+ DFG+ + T K + APE F + K
Sbjct: 125 -FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGT-KFPVKWSAPEVFHYFKY 182
Query: 248 SDKTDVYAFGVVLLELLT-GRKPIE 271
S K+DV+AFG+++ E+ + G+ P +
Sbjct: 183 SSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 24/220 (10%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSL 114
++ G LG G + V K + A K + K SS+ RE+ I +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L + + + LI + VSGG L L EK+ +T + I
Sbjct: 66 RHPNIITLHD-IFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT-------QFLKQI 117
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLATWTSAPSVPFLCKTV 230
+ V YLH+ + + H D+KP NI+L K +P KL DFG+A A + K +
Sbjct: 118 LDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNI 171
Query: 231 KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 26/236 (11%)
Query: 54 EILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELM 109
+I +F ++LG+G+ VF + AIK L K+ D + + +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 110 IASSLHHPNIVPLVGFC-IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
++ + HP + + FC ++ LF + +Y++GG L H+ K +T
Sbjct: 71 LSLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF------ 122
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA--TWTSAPSVPFL 226
A I + +LH+ + +V+RD+K NILL K+ DFG+
Sbjct: 123 -YAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXF 178
Query: 227 CKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLV 282
C GT Y+APE K + D ++FGV+L E+L G+ P Q EE L
Sbjct: 179 C----GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG---QDEEELF 227
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSK-AFCRELMIASSL 114
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 115 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 92 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKT 229
IA YL E +HRDI N LL+ ++ K+ DFG+A S
Sbjct: 149 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGC 205
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQ 276
++ PE F G + KTD ++FGV+L E+ + G P ++ Q
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 253
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSK-AFCRELMIASSL 114
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKF 105
Query: 115 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 106 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKT 229
IA YL E +HRDI N LL+ ++ K+ DFG+A S
Sbjct: 163 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQ 276
++ PE F G + KTD ++FGV+L E+ + G P ++ Q
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 267
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSK-AFCRELMIASSL 114
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 105
Query: 115 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 106 NHQNIVRCIGVSL---QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKT 229
IA YL E +HRDI N LL+ ++ K+ DFG+A S
Sbjct: 163 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQ 276
++ PE F G + KTD ++FGV+L E+ + G P ++ Q
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 267
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG+G V+ G T VAIK L K S +AF +E + L H +V L + +
Sbjct: 16 LGQGCFGEVWMGTWNGT-TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 71
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNS-TLPWSVRYKVALGIAESVAYLHNGTE 186
E+ + ++ +Y+S GSL L KG G LP V +A IA +AY+
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFL----KGETGKYLRLPQLV--DMAAQIASGMAYVERMN- 124
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGK 246
VHRD++ +NIL+ + K+ DFGLA + K + APE +G+
Sbjct: 125 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAALYGR 181
Query: 247 VSDKTDVYAFGVVLLELLT-GRKP 269
+ K+DV++FG++L EL T GR P
Sbjct: 182 FTIKSDVWSFGILLTELTTKGRVP 205
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPLVGF 125
LG+GA S V + L A K ++ K + RE I L HPNIV L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD- 88
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
I E +LI+ V+GG L + ++ +++ I E+V + H
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-------HCIQQILEAVLHCH--- 138
Query: 186 ERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
+ VVHRD+KP N+LL+SK KL DFGLA + GT GYL+PE
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF--GFAGTPGYLSPEVL 196
Query: 243 QHGKVSDKTDVYAFGVVLLELLTGRKPI 270
+ D++A GV+L LL G P
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 25/229 (10%)
Query: 52 YGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFC 105
Y + + H + G LG G + V K + A K + K SS+
Sbjct: 19 YFQSMVEDH-YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE 77
Query: 106 RELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS 165
RE+ I + HPNI+ L + + + LI + VSGG L L EK+ +T
Sbjct: 78 REVNILREIRHPNIITLHD-IFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT---- 132
Query: 166 VRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLATWTSAP 221
+ I + V YLH+ + + H D+KP NI+L K +P KL DFG+A A
Sbjct: 133 ---QFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 186
Query: 222 SVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
+ K + GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 187 NE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 24/220 (10%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSL 114
++ G LG G + V K + A K + K SS+ RE+ I +
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNI+ L + + + LI + VSGG L L EK+ +T + I
Sbjct: 73 RHPNIITLHD-IFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT-------QFLKQI 124
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLATWTSAPSVPFLCKTV 230
+ V YLH+ + + H D+KP NI+L K +P KL DFG+A A + K +
Sbjct: 125 LDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNI 178
Query: 231 KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V GK + VAIK + KE S F E + +L H +V L G C
Sbjct: 16 LGTGQFGVVKYGK-WRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +F+I +Y++ G L +L E + + L ++ + E++ YL + +
Sbjct: 74 -KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLES---K 123
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L++ + + K+ DFGL+ +TS+ F + + PE
Sbjct: 124 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-------WSPPEV 176
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKPIE 271
+ K S K+D++AFGV++ E+ + G+ P E
Sbjct: 177 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSK-AFCRELMIASSL 114
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 115 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 91 NHQNIVRCIGVSL---QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKT 229
IA YL E +HRDI N LL+ ++ K+ DFG+A S
Sbjct: 148 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQ 276
++ PE F G + KTD ++FGV+L E+ + G P ++ Q
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 252
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 18/221 (8%)
Query: 68 LGRGALSFVFKG--KVGLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPLVG 124
LG G V +G ++ + VAIK L + +K ++ RE I L +P IV L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 125 FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 184
C + L L+ + GG L + L K++ + ++ + ++V++G+ YL
Sbjct: 404 VCQ--AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA--ELLHQVSMGMK----YLE-- 453
Query: 185 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEYFQ 243
E+ VHR++ N+LL ++ K+ DFGL+ A + ++ K + APE
Sbjct: 454 -EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 512
Query: 244 HGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLVL 283
K S ++DV+++GV + E L+ G+KP ++++G E +
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQKPY--KKMKGPEVMAF 551
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSK-AFCRELMIASSL 114
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 58 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 117
Query: 115 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 118 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 174
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKT 229
IA YL E +HRDI N LL+ ++ K+ DFG+A S
Sbjct: 175 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 231
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQ 276
++ PE F G + KTD ++FGV+L E+ + G P ++ Q
Sbjct: 232 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 279
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 62 FSKGRVLGRGALSFVF--KGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNI 119
+ + + LG GA V + KV + ++ I R S+ E+ + L HPNI
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 120 VPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVA 179
+ L F D ++ +L+ + GG L + + K ++ + + + V
Sbjct: 99 MKLYDFFED-KRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV-------IIKQVLSGVT 150
Query: 180 YLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGL-ATWTSAPSVPFLCKTVKGTFG 235
YLH + +VHRD+KP N+LL SK+ + K+ DFGL A + + + K GT
Sbjct: 151 YLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM----KERLGTAY 203
Query: 236 YLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y+APE + K +K DV++ GV+L LL G P
Sbjct: 204 YIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSK-AFCRELMIASSL 114
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 115 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 91 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKT 229
IA YL E +HRDI N LL+ ++ K+ DFG+A S
Sbjct: 148 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQ 276
++ PE F G + KTD ++FGV+L E+ + G P ++ Q
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 252
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V GK + VAIK + KE S F E + +L H +V L G C
Sbjct: 17 LGTGQFGVVKYGK-WRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +F+I +Y++ G L +L E + + L ++ + E++ YL + +
Sbjct: 75 -KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLES---K 124
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L++ + + K+ DFGL+ +TS+ F + + PE
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR-------WSPPEV 177
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKPIE 271
+ K S K+D++AFGV++ E+ + G+ P E
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSK-AFCRELMIASSL 114
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 48 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 107
Query: 115 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 108 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 164
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKT 229
IA YL E +HRDI N LL+ ++ K+ DFG+A S
Sbjct: 165 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 221
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQ 276
++ PE F G + KTD ++FGV+L E+ + G P ++ Q
Sbjct: 222 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 269
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSK-AFCRELMIASSL 114
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 115 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 92 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKT 229
IA YL E +HRDI N LL+ ++ K+ DFG+A S
Sbjct: 149 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQ 276
++ PE F G + KTD ++FGV+L E+ + G P ++ Q
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 253
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 106 RELMIASSLHHPNIVPLVGFC-IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPW 164
RE A L P++VP+ F ID + L++ + ++G L L + G P
Sbjct: 83 REARTAGRLQEPHVVPIHDFGEIDGQ--LYVDXRLINGVDLAAXLRRQ-----GPLAPPR 135
Query: 165 SVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVP 224
+V +G A A+ T HRD+KP NIL+S+ L DFG+A+ T+ +
Sbjct: 136 AVAIVRQIGSALDAAHAAGAT-----HRDVKPENILVSADDFAYLVDFGIASATTDEKLT 190
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRL 275
L TV GT Y APE F + + D+YA VL E LTG P + +L
Sbjct: 191 QLGNTV-GTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL 240
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 68 LGRGALSFV---FKGKVGLLRTS--VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPL 122
LG+GA S V K G + + K+L D + + RE I L HPNIV L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIVRL 68
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
I E +L++ V+GG L + ++ +++ I ESV + H
Sbjct: 69 HD-SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-------HCIQQILESVNHCH 120
Query: 183 -NGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
NG +VHRD+KP N+LL+SK KL DFGLA + GT GYL+
Sbjct: 121 LNG----IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLS 174
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
PE + D++A GV+L LL G P
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V GK + VAIK + KE S F E + +L H +V L G C
Sbjct: 17 LGTGQFGVVKYGK-WRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +F+I +Y++ G L +L E + + L ++ + E++ YL + +
Sbjct: 75 -KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLES---K 124
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L++ + + K+ DFGL+ +TS+ F + + PE
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-------WSPPEV 177
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKPIE 271
+ K S K+D++AFGV++ E+ + G+ P E
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V GK + VAIK + KE S F E + +L H +V L G C
Sbjct: 12 LGTGQFGVVKYGK-WRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
++ +F+I +Y++ G L +L E + + L ++ + E++ YL + +
Sbjct: 70 -KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLES---K 119
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD+ N L++ + + K+ DFGL+ +TS+ F + + PE
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-------WSPPEV 172
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKPIE 271
+ K S K+D++AFGV++ E+ + G+ P E
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSK-AFCRELMIASSL 114
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 38 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 97
Query: 115 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 98 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 154
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKT 229
IA YL E +HRDI N LL+ ++ K+ DFG+A S
Sbjct: 155 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 211
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQ 276
++ PE F G + KTD ++FGV+L E+ + G P ++ Q
Sbjct: 212 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 259
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSK-AFCRELMIASSL 114
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 23 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 82
Query: 115 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 83 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 139
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKT 229
IA YL E +HRDI N LL+ ++ K+ DFG+A S
Sbjct: 140 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 196
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQ 276
++ PE F G + KTD ++FGV+L E+ + G P ++ Q
Sbjct: 197 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 244
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASSLHHPN 118
FS R +G G+ V+ + VAIK++ K+S++ + +E+ L HPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGS---LERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
+ G C E +L+ +Y G + LE H KK ++ V G
Sbjct: 77 TIQYRG-CYLREHTAWLVMEYCLGSASDLLEVH----KKPLQEVEIA------AVTHGAL 125
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +AYLH+ ++HRD+K NILLS + KL DFG A+ AP+ F+ GT
Sbjct: 126 QGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSAS-IMAPANXFV-----GTPY 176
Query: 236 YLAPEY---FQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
++APE G+ K DV++ G+ +EL + P+
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 68 LGRGALSFV---FKGKVGLLRTS--VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPL 122
LG+GA S V K G + + K+L D + + RE I L HPNIV L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIVRL 68
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
I E +L++ V+GG L + ++ +++ I ESV + H
Sbjct: 69 HD-SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-------HCIQQILESVNHCH 120
Query: 183 -NGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
NG +VHRD+KP N+LL+SK KL DFGLA + GT GYL+
Sbjct: 121 LNG----IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLS 174
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
PE + D++A GV+L LL G P
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 14/203 (6%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VAIK L K S ++F E I L H +V L + +
Sbjct: 17 LGNGQFGEVWMGTWNG-NTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQL--YAV 72
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E+ ++++ +Y++ GSL L K G LP V +A +A +AY+
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFL---KDGEGRALKLPNLV--DMAAQVAAGMAYIERMN-- 125
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV 247
+HRD++ +NIL+ + I K+ DFGLA + K + APE +G+
Sbjct: 126 -YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXT-ARQGAKFPIKWTAPEAALYGRF 183
Query: 248 SDKTDVYAFGVVLLELLT-GRKP 269
+ K+DV++FG++L EL+T GR P
Sbjct: 184 TIKSDVWSFGILLTELVTKGRVP 206
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRL--DKEDKESSKAFCRELMIASSLHHPNIVPLVG 124
++G G+ V K + VAIK+ +DK K RE+ + L H N+V L+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 125 FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 184
C ++ +L++++V L+ L G L + V K I + + H+
Sbjct: 92 VC-KKKKRWYLVFEFVDHTILD-DLELFPNG------LDYQVVQKYLFQIINGIGFCHSH 143
Query: 185 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF-- 242
++HRDIKP NIL+S + KLCDFG A +AP + + T Y APE
Sbjct: 144 N---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV--ATRWYRAPELLVG 198
Query: 243 --QHGKVSDKTDVYAFGVVLLELLTG 266
++GK DV+A G ++ E+ G
Sbjct: 199 DVKYGKA---VDVWAIGCLVTEMFMG 221
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 28/234 (11%)
Query: 60 HNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSKA-FCRELMIASS 113
+N R +G GA VF+ + GLL T VA+K L +E +A F RE + +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHE-----------------KKKGV 156
+PNIV L+G C + + L+++Y++ G L L +
Sbjct: 107 FDNPNIVKLLGVCAV-GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 157 RGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT 216
G L + + +A +A +AYL +ER VHRD+ N L+ + K+ DFGL+
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 217 WTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ ++ PE + + + ++DV+A+GVVL E+ + G +P
Sbjct: 223 NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 25/191 (13%)
Query: 86 TSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL 145
T VA+K + K S +AF E + +L H +V L + ++ +++I ++++ GSL
Sbjct: 213 TKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVTKEPIYIITEFMAKGSL 269
Query: 146 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 205
L + S P + IAE +A++ +R +HRD++ +NIL+S+
Sbjct: 270 LDFLKSDE-----GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASL 321
Query: 206 IPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVV 259
+ K+ DFGLA +T+ F K + APE G + K+DV++FG++
Sbjct: 322 VCKIADFGLARVIEDNEYTAREGAKFPIK-------WTAPEAINFGSFTIKSDVWSFGIL 374
Query: 260 LLELLT-GRKP 269
L+E++T GR P
Sbjct: 375 LMEIVTYGRIP 385
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASSLHHPN 118
FS R +G G+ V+ + VAIK++ K+S++ + +E+ L HPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGS---LERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
+ G C E +L+ +Y G + LE H KK ++ V G
Sbjct: 116 TIQYRG-CYLREHTAWLVMEYCLGSASDLLEVH----KKPLQEVEIA------AVTHGAL 164
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ +AYLH+ ++HRD+K NILLS + KL DFG A+ AP+ F+ GT
Sbjct: 165 QGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSAS-IMAPANXFV-----GTPY 215
Query: 236 YLAPEY---FQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
++APE G+ K DV++ G+ +EL + P+
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 22/219 (10%)
Query: 68 LGRGALSFVFKGKV-----GLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHHPNIVP 121
LG V+KG + G +VAIK L DK + + F E M+ + L HPN+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHL-----HEKKKGVRGNSTL-----PWSVRYKVA 171
L+G + +Q L +I+ Y S G L L H + T+ P + VA
Sbjct: 94 LLG-VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK 231
IA + YL + VVH+D+ N+L+ K K+ D GL A L
Sbjct: 153 -QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
++APE +GK S +D++++GVVL E+ + G +P
Sbjct: 209 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 17/218 (7%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLR---TSVAIKRLDKE-DKESSKAFCRELMIASS 113
A + R+LG G V++G + +VA+K K+ ++ + F E +I +
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
L HP+IV L+G I E+ ++I + G L +L K ++ + + +S L
Sbjct: 66 LDHPHIVKLIG--IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS------LQ 117
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
I +++AYL + VHRDI NIL++S + KL DFGL+ + + +
Sbjct: 118 ICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY-YKASVTRLP 173
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPI 270
+++PE + + +DV+ F V + E+L+ G++P
Sbjct: 174 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 25/191 (13%)
Query: 86 TSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL 145
T VA+K + K S +AF E + +L H +V L + ++ +++I ++++ GSL
Sbjct: 40 TKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVTKEPIYIITEFMAKGSL 96
Query: 146 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 205
L + S P + IAE +A++ +R +HRD++ +NIL+S+
Sbjct: 97 LDFLKSDE-----GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASL 148
Query: 206 IPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVV 259
+ K+ DFGLA +T+ F K + APE G + K+DV++FG++
Sbjct: 149 VCKIADFGLARVIEDNEYTAREGAKFPIK-------WTAPEAINFGSFTIKSDVWSFGIL 201
Query: 260 LLELLT-GRKP 269
L+E++T GR P
Sbjct: 202 LMEIVTYGRIP 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G V+ G T VA+K L K S +AF E + +L H +V L +
Sbjct: 20 LGAGQFGEVWMGYYNN-STKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYA-VV 76
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
E+ +++I ++++ GSL L K G LP + + IAE +AY+ +
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQ--IAEGMAYIER---K 128
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLCKTVKGTFGYLAPEY 241
+HRD++ +N+L+S + K+ DFGLA +T+ F K + APE
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK-------WTAPEA 181
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKPIEAR 273
G + K++V++FG++L E++T G+ P R
Sbjct: 182 INFGCFTIKSNVWSFGILLYEIVTYGKIPYPGR 214
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 31/231 (13%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIK-----RLDK----EDKESSKAF----CREL 108
+ K R LG GA V K + AIK + DK +D ++ + F E+
Sbjct: 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
+ SL HPNI+ L + ++ +L+ ++ GG L + + K ++
Sbjct: 98 SLLKSLDHPNIIKLFD-VFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA------- 149
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI---PKLCDFGLATWTSAPSVPF 225
+ I + YLH + +VHRDIKP NILL +K K+ DFGL+++ S +
Sbjct: 150 NIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK---DY 203
Query: 226 LCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
+ GT Y+APE + K ++K DV++ GV++ LL G P + Q
Sbjct: 204 KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ 253
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 25/234 (10%)
Query: 51 SYGEILAATHNFSKG---------RVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDK 98
+Y + A H F+K RV+G G V G++ G VAIK L
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 99 ESSK-AFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVR 157
E + F E I HPNI+ L G + + + ++ +Y+ GSL+ L +K G
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEG-VVTKSKPVMIVTEYMENGSLDTFL-KKNDGQF 121
Query: 158 GNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-T 216
L +R GI+ + YL ++ VHRD+ NIL++S + K+ DFGL+
Sbjct: 122 TVIQLVGMLR-----GISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 173
Query: 217 WTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
P + + K + APE K + +DV+++G+V+ E+++ G +P
Sbjct: 174 LEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 8/169 (4%)
Query: 107 ELMIASSLHHPNIVPLVGFCID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS 165
E+ + L HPNIV ID L+++ +Y GG L + KG + L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI---TKGTKERQYLDEE 111
Query: 166 VRYKVALGIAESVAYLHNGTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSV 223
+V + ++ H ++ V+HRD+KP+N+ L K+ KL DFGLA + +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 224 PFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
KT GT Y++PE ++K+D+++ G +L EL P A
Sbjct: 172 --FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA 218
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 17/218 (7%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLR---TSVAIKRLDKE-DKESSKAFCRELMIASS 113
A + R+LG G V++G + +VA+K K+ ++ + F E +I +
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
L HP+IV L+G I E+ ++I + G L +L K ++ + + +S L
Sbjct: 70 LDHPHIVKLIG--IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS------LQ 121
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
I +++AYL + VHRDI NIL++S + KL DFGL+ + + +
Sbjct: 122 ICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY-YKASVTRLP 177
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPI 270
+++PE + + +DV+ F V + E+L+ G++P
Sbjct: 178 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 28/221 (12%)
Query: 62 FSKGRVLGRGALSFVFKGK---VGLLRTSVAIKRLDKEDKESSKAFCRE-----LMIASS 113
+ G LG G + V K + GL + IK+ ++ + S + CRE + I
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKK--RQSRASRRGVCREEIEREVSILRQ 71
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
+ HPNI+ L + + LI + VSGG L L +K+ +T
Sbjct: 72 VLHPNIITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-------SFIKQ 123
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLATWTSAPSVPFLCKT 229
I + V YLH + + H D+KP NI+L K IP KL DFGLA V F K
Sbjct: 124 ILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEF--KN 177
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
+ GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 99/223 (44%), Gaps = 19/223 (8%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELMIAS 112
A +F +V+G+G+ V + A+K L K+ KE ++
Sbjct: 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK 94
Query: 113 SLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
++ HP +V L F L+ + Y++GG L HL R L R+ A
Sbjct: 95 NVKHPFLVGL-HFSFQTADKLYFVLDYINGGELFYHLQ------RERCFLEPRARFYAA- 146
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKG 232
IA ++ YLH+ +V+RD+KP NILL S+ L DFGL + T G
Sbjct: 147 EIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCG 201
Query: 233 TFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARR 274
T YLAPE H + D+T D + G VL E+L G P +R
Sbjct: 202 TPEYLAPEVL-HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 243
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 17/218 (7%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLR---TSVAIKRLDKE-DKESSKAFCRELMIASS 113
A + R+LG G V++G + +VA+K K+ ++ + F E +I +
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
L HP+IV L+G I E+ ++I + G L +L K ++ + + +S L
Sbjct: 82 LDHPHIVKLIG--IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS------LQ 133
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
I +++AYL + VHRDI NIL++S + KL DFGL+ + + +
Sbjct: 134 ICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY-YKASVTRLP 189
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPI 270
+++PE + + +DV+ F V + E+L+ G++P
Sbjct: 190 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVPLVGFC 126
LG G + V+KGK L VA+K + E +E + RE+ + L H NIV L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI- 68
Query: 127 IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTE 186
I E+ L L+++Y+ L+++L + GN +V+ + +AY H
Sbjct: 69 IHTEKSLTLVFEYLDK-DLKQYLDDC-----GNIINMHNVKL-FLFQLLRGLAYCHR--- 118
Query: 187 RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE-YFQHG 245
+ V+HRD+KP N+L++ + KL DFGLA S P+ + + V T Y P+
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGST 176
Query: 246 KVSDKTDVYAFGVVLLELLTGR 267
S + D++ G + E+ TGR
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGR 198
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 22/219 (10%)
Query: 68 LGRGALSFVFKGKV-----GLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHHPNIVP 121
LG V+KG + G +VAIK L DK + + F E M+ + L HPN+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHL-----HEKKKGVRGNSTL-----PWSVRYKVA 171
L+G + +Q L +I+ Y S G L L H + T+ P + VA
Sbjct: 77 LLG-VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK 231
IA + YL + VVH+D+ N+L+ K K+ D GL A L
Sbjct: 136 -QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
++APE +GK S +D++++GVVL E+ + G +P
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGF 125
VLG GA S VF K L A+K + K + E+ + + H NIV L
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
+ +L+ + VSGG L + E+ +++L V + +V YLH
Sbjct: 75 -YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-------VIQQVLSAVKYLH--- 123
Query: 186 ERCVVHRDIKPSNIL-LSSKKIPKL--CDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
E +VHRD+KP N+L L+ ++ K+ DFGL+ + C GT GY+APE
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC----GTPGYVAPEVL 179
Query: 243 QHGKVSDKTDVYAFGVVLLELLTGRKPI 270
S D ++ GV+ LL G P
Sbjct: 180 AQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 103/228 (45%), Gaps = 18/228 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSK-AFCRELMIASSL 114
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 49 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 108
Query: 115 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 109 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 165
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKT 229
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 166 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 222
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQ 276
++ PE F G + KTD ++FGV+L E+ + G P ++ Q
Sbjct: 223 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 270
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 103/228 (45%), Gaps = 18/228 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSK-AFCRELMIASSL 114
N + R LG GA V++G+V + VA+K L + E + F E +I S
Sbjct: 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 131
Query: 115 HHPNIVPLVGFCIDPEQGL--FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
+H NIV +G + Q L F++ + ++GG L+ L E + S+L VA
Sbjct: 132 NHQNIVRCIGVSL---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 188
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKT 229
IA YL E +HRDI N LL+ ++ K+ DFG+A
Sbjct: 189 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 245
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQ 276
++ PE F G + KTD ++FGV+L E+ + G P ++ Q
Sbjct: 246 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 293
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 98/213 (46%), Gaps = 28/213 (13%)
Query: 66 RVLGRGALSFVFKGKVGLLR---------TSVAIKRLDKEDKESSKA-FCRELMIASSLH 115
R LG G GKV L R VA+K L E + A +E+ I +L+
Sbjct: 27 RDLGEGHF-----GKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY 81
Query: 116 HPNIVPLVGFCI-DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
H NIV G C D G+ LI +++ GSL+ +L + K + L ++V+ I
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ------I 135
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT- 233
+ + YL + R VHRD+ N+L+ S+ K+ DFGL K + +
Sbjct: 136 CKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 192
Query: 234 -FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
F Y APE K +DV++FGV L ELLT
Sbjct: 193 VFWY-APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 98/213 (46%), Gaps = 28/213 (13%)
Query: 66 RVLGRGALSFVFKGKVGLLR---------TSVAIKRLDKEDKESSKA-FCRELMIASSLH 115
R LG G GKV L R VA+K L E + A +E+ I +L+
Sbjct: 15 RDLGEGHF-----GKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY 69
Query: 116 HPNIVPLVGFCI-DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
H NIV G C D G+ LI +++ GSL+ +L + K + L ++V+ I
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ------I 123
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT- 233
+ + YL + R VHRD+ N+L+ S+ K+ DFGL K + +
Sbjct: 124 CKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 180
Query: 234 -FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
F Y APE K +DV++FGV L ELLT
Sbjct: 181 VFWY-APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 65 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIV 120
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 72 KLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 129
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRDI N+L+SS KL DFGL+ + S + K ++APE
Sbjct: 130 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPE 179
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+ + +DV+ FGV + E+L G KP +
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 212
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 65 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIV 120
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 75 KLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRDI N+L+SS KL DFGL+ + S + K ++APE
Sbjct: 133 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPE 182
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+ + +DV+ FGV + E+L G KP +
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 65 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIV 120
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 18 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 77
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 78 KLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 135
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRDI N+L+SS KL DFGL+ + S + K ++APE
Sbjct: 136 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPE 185
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+ + +DV+ FGV + E+L G KP +
Sbjct: 186 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 218
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 32/226 (14%)
Query: 62 FSKGRVLGRGALSF-----------VFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMI 110
+ +GR LG+G + VF GKV + S+ +K KE + E+ I
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKV--VPKSMLLKPHQKEKMST------EIAI 95
Query: 111 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 170
SL +P++V GF D + ++++ + SL LH+++K V T P RY +
Sbjct: 96 HKSLDNPHVVGFHGFFED-DDFVYVVLEICRRRSL-LELHKRRKAV----TEP-EARYFM 148
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 230
I + V YLHN V+HRD+K N+ L+ K+ DFGLAT KT+
Sbjct: 149 RQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE--RKKTL 202
Query: 231 KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
GT Y+APE S + D+++ G +L LL G+ P E L+
Sbjct: 203 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK 248
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 65 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIV 120
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 75 KLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRDI N+L+SS KL DFGL+ + S + K ++APE
Sbjct: 133 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPE 182
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+ + +DV+ FGV + E+L G KP +
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 65 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIV 120
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 17 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 77 KLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 134
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRDI N+L+SS KL DFGL+ + S + K ++APE
Sbjct: 135 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPE 184
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+ + +DV+ FGV + E+L G KP +
Sbjct: 185 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 217
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 23/185 (12%)
Query: 86 TSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL 145
T VA+K + K S +AF E + +L H +V L + ++ +++I ++++ GSL
Sbjct: 207 TKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVTKEPIYIITEFMAKGSL 263
Query: 146 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 205
L + S P + IAE +A++ +R +HRD++ +NIL+S+
Sbjct: 264 LDFLKSDE-----GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASL 315
Query: 206 IPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
+ K+ DFGLA K + APE G + K+DV++FG++L+E++T
Sbjct: 316 VCKIADFGLAR-----------VGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
Query: 266 -GRKP 269
GR P
Sbjct: 365 YGRIP 369
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 68 LGRGALSFV---FKGKVGLLRTSVAI--KRLDKEDKESSKAFCRELMIASSLHHPNIVPL 122
LG+GA S V K G ++ I K+L D + + RE I L HPNIV L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REARICRLLKHPNIVRL 75
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
I E +LI+ V+GG L + ++ +++ I E+V + H
Sbjct: 76 HD-SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-------HCIQQILEAVLHCH 127
Query: 183 NGTERCVVHRDIKPSNILLSSK---KIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAP 239
+ VVHR++KP N+LL+SK KL DFGLA + GT GYL+P
Sbjct: 128 ---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF--GFAGTPGYLSP 182
Query: 240 EYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
E + D++A GV+L LL G P
Sbjct: 183 EVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 65 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIV 120
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 79
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 80 KLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 137
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRDI N+L+SS KL DFGL+ + S + K ++APE
Sbjct: 138 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPE 187
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+ + +DV+ FGV + E+L G KP +
Sbjct: 188 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 220
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 88 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQG-LFLIYKYVSGGSLE 146
VA+K+L + + F RE+ I +LH IV G P + L L+ +Y+ G L
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLR 98
Query: 147 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 206
L + + + L +S + I + + YL G+ RCV HRD+ NIL+ S+
Sbjct: 99 DFLQRHRARLDASRLLLYSSQ------ICKGMEYL--GSRRCV-HRDLAARNILVESEAH 149
Query: 207 PKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
K+ DFGLA + + + + APE S ++DV++FGVVL EL T
Sbjct: 150 VKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 65 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIV 120
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 43 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 102
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 103 KLIG--VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 160
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRDI N+L+SS KL DFGL+ + S + K ++APE
Sbjct: 161 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPE 210
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+ + +DV+ FGV + E+L G KP +
Sbjct: 211 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 243
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 66 RVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
R LG GA VF + L + VA+K L + K F RE + ++L H +IV
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGV---------RGNSTLPWSVRYKVA 171
G C D + L ++++Y+ G L + L + L S +A
Sbjct: 81 KFYGVCGDGDP-LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK 231
IA + YL + VHRD+ N L+ + + K+ DFG++ + +
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
++ PE + K + ++DV++FGV+L E+ T G++P
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 55 ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELMI 110
I ++FS R++GRG V+ + A+K LDK+ + + A +M+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 111 A--SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
+ S+ P IV + + L I ++GG L H H + GV + + +
Sbjct: 244 SLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRF---- 296
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
A I + ++HN R VV+RD+KP+NILL ++ D GLA S
Sbjct: 297 -YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----H 348
Query: 229 TVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENL 281
GT GY+APE Q G D + D ++ G +L +LL G P + + + +
Sbjct: 349 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 55 ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELMI 110
I ++FS R++GRG V+ + A+K LDK+ + + A +M+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 111 A--SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
+ S+ P IV + + L I ++GG L H H + GV + + +
Sbjct: 244 SLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRF---- 296
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
A I + ++HN R VV+RD+KP+NILL ++ D GLA S
Sbjct: 297 -YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----H 348
Query: 229 TVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENL 281
GT GY+APE Q G D + D ++ G +L +LL G P + + + +
Sbjct: 349 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 13/210 (6%)
Query: 65 GRVLGRGALSFVFKGKVGL-----LRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNI 119
G++LG G V +G + L+ +V +LD + + F E HPN+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 120 VPLVGFCID-PEQGL---FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
+ L+G CI+ QG+ +I ++ G L +L + G +P K + IA
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET-GPKHIPLQTLLKFMVDIA 157
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+ YL N R +HRD+ N +L + DFGL+ + + K
Sbjct: 158 LGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 236 YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
++A E + K+DV+AFGV + E+ T
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 55 ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELMI 110
I ++FS R++GRG V+ + A+K LDK+ + + A +M+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 111 A--SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
+ S+ P IV + + L I ++GG L H H + GV + + +
Sbjct: 244 SLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRF---- 296
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
A I + ++HN R VV+RD+KP+NILL ++ D GLA S
Sbjct: 297 -YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----H 348
Query: 229 TVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENL 281
GT GY+APE Q G D + D ++ G +L +LL G P + + + +
Sbjct: 349 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 22 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP------------ 163
H NI+ L+G C + L++I +Y S G+L +L ++ S P
Sbjct: 82 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 164 -WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 222
S Y+VA G+ YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 141 LVSCAYQVARGME----YL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA--RDIHH 191
Query: 223 VPFLCKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
+ + KT G ++APE + ++DV++FGV+L E+ T
Sbjct: 192 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 15/215 (6%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHP 117
+F+ VLG+G+ V AIK L K+ + + E + + L P
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
+ + C L+ + +YV+GG L H+ + G P +V Y + I
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ-----VGKFKEPQAVFYAAEISIG-- 132
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ +LH +R +++RD+K N++L S+ K+ DFG+ V + GT Y+
Sbjct: 133 LFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV--TTREFCGTPDYI 187
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
APE + D +A+GV+L E+L G+ P +
Sbjct: 188 APEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 222
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP------------ 163
H NI+ L+G C + L++I +Y S G+L +L ++ S P
Sbjct: 93 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 164 -WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 222
S Y+VA G+ YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 152 LVSCAYQVARGME----YL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA--RDIHH 202
Query: 223 VPFLCKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
+ + KT G ++APE + ++DV++FGV+L E+ T
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 32/274 (11%)
Query: 16 LENGLCDSRAQELKWRKIQSLERSISPVANSLIRLSYGEIL---------AATHNFSKGR 66
LE G C QEL + L S++P A+ L + + L + F + R
Sbjct: 133 LEQGPCKDLFQELTRLTHEYL--SVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYR 190
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
VLG+G V +V G + +++ + ++ E I ++ +V L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL- 249
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ + + L L+ ++GG L+ H++ G + P + A I + LH
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHM-----GQAGFPEARAVFYAAEICCGLEDLHR 304
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKG---TFGYLAPE 240
ER +V+RD+KP NILL ++ D GLA VP +T+KG T GY+APE
Sbjct: 305 --ER-IVYRDLKPENILLDDHGHIRISDLGLAV-----HVP-EGQTIKGRVGTVGYMAPE 355
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARR 274
++ + + D +A G +L E++ G+ P + R+
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 100/231 (43%), Gaps = 31/231 (13%)
Query: 60 HNFSKGRVLGRGALSFVFK-------GKVGLLRTSVAIKRLDKED-KESSKAFCRELMIA 111
+ V+GRG S V + + + V +RL E +E +A RE I
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 112 SSLH-HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 170
+ HP+I+ L+ + +FL++ + G L +L EK L +
Sbjct: 154 RQVAGHPHIITLID-SYESSSFMFLVFDLMRKGELFDYLTEK-------VALSEKETRSI 205
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT-WTSAPSVPFLCKT 229
+ E+V++LH +VHRD+KP NILL +L DFG + + LC
Sbjct: 206 MRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELC-- 260
Query: 230 VKGTFGYLAPEYFQ------HGKVSDKTDVYAFGVVLLELLTGRKPIEARR 274
GT GYLAPE + H + D++A GV+L LL G P RR
Sbjct: 261 --GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR 309
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 55 ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE----DKESSKAFCRELMI 110
I ++FS R++GRG V+ + A+K LDK+ + + A +M+
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 111 A--SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
+ S+ P IV + + L I ++GG L H H + GV + + +
Sbjct: 243 SLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRF---- 295
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
A I + ++HN R VV+RD+KP+NILL ++ D GLA S
Sbjct: 296 -YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----H 347
Query: 229 TVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENL 281
GT GY+APE Q G D + D ++ G +L +LL G P + + + +
Sbjct: 348 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 20/232 (8%)
Query: 45 NSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKV---GLLRTSVAIKRLDK--EDKE 99
N +R EI A+ K V+G G V G++ G VAIK L DK+
Sbjct: 16 NQAVREFAKEIDASCIKIEK--VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ 73
Query: 100 SSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGN 159
+ F E I HPNI+ L G + + + +I +Y+ GSL+ L + G
Sbjct: 74 R-RDFLSEASIMGQFDHPNIIHLEG-VVTKCKPVMIITEYMENGSLDAFLRKND----GR 127
Query: 160 STLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWT 218
T+ V + GI + YL ++ VHRD+ NIL++S + K+ DFG++
Sbjct: 128 FTVIQLV--GMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE 182
Query: 219 SAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
P + + K + APE + K + +DV+++G+V+ E+++ G +P
Sbjct: 183 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 20/232 (8%)
Query: 45 NSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKV---GLLRTSVAIKRLDK--EDKE 99
N +R EI A+ K V+G G V G++ G VAIK L DK+
Sbjct: 1 NQAVREFAKEIDASCIKIEK--VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ 58
Query: 100 SSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGN 159
+ F E I HPNI+ L G + + + +I +Y+ GSL+ L + G
Sbjct: 59 R-RDFLSEASIMGQFDHPNIIHLEGV-VTKCKPVMIITEYMENGSLDAFLRKND----GR 112
Query: 160 STLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWT 218
T+ V + GI + YL ++ VHRD+ NIL++S + K+ DFG++
Sbjct: 113 FTVIQLV--GMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE 167
Query: 219 SAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
P + + K + APE + K + +DV+++G+V+ E+++ G +P
Sbjct: 168 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 26 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP------------ 163
H NI+ L+G C + L++I +Y S G+L +L ++ S P
Sbjct: 86 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 164 -WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 222
S Y+VA G+ YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 145 LVSCAYQVARGME----YL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA--RDIHH 195
Query: 223 VPFLCKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
+ + KT G ++APE + ++DV++FGV+L E+ T
Sbjct: 196 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 59 THNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED---KESSKAFCRELMIASSLH 115
+ + + + LG GA V K L AIK + K +S A E+ + L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPNI+ L F D ++ +L+ + GG L + ++K S + +V K L
Sbjct: 63 HPNIMKLYEFFED-KRNYYLVMEVYRGGELFDEIILRQK----FSEVDAAVIMKQVLS-- 115
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSVPFLCKTVKG 232
YLH +VHRD+KP N+LL SK + K+ DFGL ++ V K G
Sbjct: 116 -GTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGL---SAHFEVGGKMKERLG 168
Query: 233 TFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
T Y+APE + K +K DV++ GV+L LL G P
Sbjct: 169 TAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 25 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP------------ 163
H NI+ L+G C + L++I +Y S G+L +L ++ S P
Sbjct: 85 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 164 -WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 222
S Y+VA G+ YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 144 LVSCAYQVARGME----YL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA--RDIHH 194
Query: 223 VPFLCKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
+ + KT G ++APE + ++DV++FGV+L E+ T
Sbjct: 195 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIV 120
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 75 KLIG--VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF--GYLA 238
VHRDI N+L+SS KL DFGL+ + + K KG ++A
Sbjct: 133 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTX---XKASKGKLPIKWMA 180
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
PE + + +DV+ FGV + E+L G KP +
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 32/274 (11%)
Query: 16 LENGLCDSRAQELKWRKIQSLERSISPVANSLIRLSYGEIL---------AATHNFSKGR 66
LE G C QEL + L S++P A+ L + + L + F + R
Sbjct: 133 LEQGPCKDLFQELTRLTHEYL--SVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYR 190
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
VLG+G V +V G + +++ + ++ E I ++ +V L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL- 249
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ + + L L+ ++GG L+ H++ G + P + A I + LH
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHM-----GQAGFPEARAVFYAAEICCGLEDLHR 304
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKG---TFGYLAPE 240
ER +V+RD+KP NILL ++ D GLA VP +T+KG T GY+APE
Sbjct: 305 --ER-IVYRDLKPENILLDDHGHIRISDLGLAV-----HVP-EGQTIKGRVGTVGYMAPE 355
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARR 274
++ + + D +A G +L E++ G+ P + R+
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP------------ 163
H NI+ L+G C + L++I +Y S G+L +L ++ S P
Sbjct: 93 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 164 -WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 222
S Y+VA G+ YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 152 LVSCAYQVARGME----YL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA--RDIHH 202
Query: 223 VPFLCKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
+ + KT G ++APE + ++DV++FGV+L E+ T
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 107 ELMIASSLHHPNIVPLVGFCID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS 165
E+ + L HPNIV ID L+++ +Y GG L + KG + L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI---TKGTKERQYLDEE 111
Query: 166 VRYKVALGIAESVAYLHNGTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSV 223
+V + ++ H ++ V+HRD+KP+N+ L K+ KL DFGLA + +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 224 PFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
K GT Y++PE ++K+D+++ G +L EL P A
Sbjct: 172 --FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA 218
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I + L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 12/215 (5%)
Query: 62 FSKGRVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPN 118
F RVLGRG VF ++ G L + + + ++ + E I + +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
IV L + + + L L+ ++GG + H++ + G P ++ Y I +
Sbjct: 247 IVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQ--IVSGL 302
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+LH +R +++RD+KP N+LL ++ D GLA A K GT G++A
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMA 357
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEAR 273
PE + D +A GV L E++ R P AR
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 19/211 (9%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPL 122
V+GRG V+ G + + A+K L++ D F E +I HPN++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAY 180
+G C+ E ++ Y+ G L + N T +V+ + G +A+ + Y
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKY 147
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKT-VKGTFGYLA 238
L + VHRD+ N +L K K+ DFGLA KT K ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
E Q K + K+DV++FGV+L EL+T P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 12/215 (5%)
Query: 62 FSKGRVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPN 118
F RVLGRG VF ++ G L + + + ++ + E I + +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
IV L + + + L L+ ++GG + H++ + G P ++ Y I +
Sbjct: 247 IVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQ--IVSGL 302
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+LH +R +++RD+KP N+LL ++ D GLA A K GT G++A
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMA 357
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEAR 273
PE + D +A GV L E++ R P AR
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 51 SYGEILAATHNFSKG---------RVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDK 98
+Y + A H F+K RV+G G V G++ G +VAIK L
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 99 ESSK-AFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVR 157
E + F E I HPN+V L G + + + ++ +++ G+L+ L +
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEG-VVTRGKPVMIVIEFMENGALDAFLRKHD---- 139
Query: 158 GNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-T 216
G T+ V + GIA + YL + VHRD+ NIL++S + K+ DFGL+
Sbjct: 140 GQFTVIQLV--GMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV 194
Query: 217 WTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
P + K + APE Q+ K + +DV+++G+V+ E+++ G +P
Sbjct: 195 IEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 59 THNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED---KESSKAFCRELMIASSLH 115
+ + + + LG GA V K L AIK + K +S A E+ + L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPNI+ L F D ++ +L+ + GG L + ++K ++ + + +
Sbjct: 80 HPNIMKLYEFFED-KRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-------IMKQVL 131
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSVPFLCKTVKG 232
YLH +VHRD+KP N+LL SK + K+ DFGL ++ V K G
Sbjct: 132 SGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGL---SAHFEVGGKMKERLG 185
Query: 233 TFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
T Y+APE + K +K DV++ GV+L LL G P
Sbjct: 186 TAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 12/215 (5%)
Query: 62 FSKGRVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPN 118
F RVLGRG VF ++ G L + + + ++ + E I + +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
IV L + + + L L+ ++GG + H++ + G P ++ Y I +
Sbjct: 247 IVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQ--IVSGL 302
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+LH +R +++RD+KP N+LL ++ D GLA A K GT G++A
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMA 357
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEAR 273
PE + D +A GV L E++ R P AR
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 30/217 (13%)
Query: 66 RVLGRGALSFVFK---------GKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASS 113
RVLG+G VF+ GK+ +L+ ++ ++ + +D +KA E I
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR--NAKDTAHTKA---ERNILEE 77
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
+ HP IV L+ + L+LI +Y+SGG L L +++G+ T + Y +
Sbjct: 78 VKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDT---ACFYLAEIS 131
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+A + +LH ++ +++RD+KP NI+L+ + KL DFGL + + T GT
Sbjct: 132 MA--LGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGT 184
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y+APE + D ++ G ++ ++LTG P
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 12/215 (5%)
Query: 62 FSKGRVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPN 118
F RVLGRG VF ++ G L + + + ++ + E I + +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
IV L + + + L L+ ++GG + H++ + G P ++ Y I +
Sbjct: 247 IVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQ--IVSGL 302
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+LH +R +++RD+KP N+LL ++ D GLA A K GT G++A
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMA 357
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEAR 273
PE + D +A GV L E++ R P AR
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP------------ 163
H NI+ L+G C + L++I +Y S G+L +L ++ S P
Sbjct: 134 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 164 -WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 222
S Y+VA G+ YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 193 LVSCAYQVARGME----YL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA--RDIHH 243
Query: 223 VPFLCKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
+ + KT G ++APE + ++DV++FGV+L E+ T
Sbjct: 244 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 66 RVLGRGALSFVFKGKV---GLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIV 120
+V+G G V G++ G VAIK L DK+ + F E I HPNI+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASIMGQFDHPNII 72
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L G + + + +I +Y+ GSL+ L + G T+ V + GI + Y
Sbjct: 73 HLEGV-VTKCKPVMIITEYMENGSLDAFLRKND----GRFTVIQLV--GMLRGIGSGMKY 125
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKTVKGTFGYLAP 239
L ++ VHRD+ NIL++S + K+ DFG++ P + + K + AP
Sbjct: 126 L---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 240 EYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
E + K + +DV+++G+V+ E+++ G +P
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC---RELMIASSLHHPNIVP 121
G LG G V GK L VA+K L+++ S RE+ HP+I+
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L P +F++ +YVSGG L ++ + N L ++ I V Y
Sbjct: 81 LYQVISTPSD-IFMVMEYVSGGELFDYICK-------NGRLDEKESRRLFQQILSGVDYC 132
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEY 241
H VVHRD+KP N+LL + K+ DFGL+ S FL + G+ Y APE
Sbjct: 133 H---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSC-GSPNYAAPEV 186
Query: 242 FQHGKV--SDKTDVYAFGVVLLELLTGRKPIE 271
G++ + D+++ GV+L LL G P +
Sbjct: 187 IS-GRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 65 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIV 120
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 455 KLIG--VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRDI N+L+SS KL DFGL+ + S + K ++APE
Sbjct: 513 ---------VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPE 562
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+ + +DV+ FGV + E+L G KP +
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 19/211 (9%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPL 122
V+GRG V+ G + + A+K L++ D F E +I HPN++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAY 180
+G C+ E ++ Y+ G L + N T +V+ + G +A+ + Y
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKY 148
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKT-VKGTFGYLA 238
L + VHRD+ N +L K K+ DFGLA KT K ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
E Q K + K+DV++FGV+L EL+T P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 19/211 (9%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPL 122
V+GRG V+ G + + A+K L++ D F E +I HPN++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAY 180
+G C+ E ++ Y+ G L + N T +V+ + G +A+ + Y
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKY 146
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKT-VKGTFGYLA 238
L + VHRD+ N +L K K+ DFGLA KT K ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
E Q K + K+DV++FGV+L EL+T P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 104/230 (45%), Gaps = 33/230 (14%)
Query: 66 RVLGRGALSFVFKGK-VGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLH-HPNIVPLV 123
RVL G +FV++ + VG R A+KRL ++E ++A +E+ L HPNIV
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGR-EYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ-- 90
Query: 124 GFCI---------DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
FC D Q FL+ + G L L KK RG L K+
Sbjct: 91 -FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFL--KKMESRG--PLSCDTVLKIFYQT 145
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTS-APSVPFLCK----- 228
+V ++H + ++HRD+K N+LLS++ KLCDFG AT S P + +
Sbjct: 146 CRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALV 204
Query: 229 ----TVKGTFGYLAPE---YFQHGKVSDKTDVYAFGVVLLELLTGRKPIE 271
T T Y PE + + + +K D++A G +L L + P E
Sbjct: 205 EEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 17/215 (7%)
Query: 64 KGRVLGRGALSFVFKG----KVGLLRTSVAIKRL-DKEDKESSKAFCRELMIASSLHHPN 118
K +VLG GA V+KG ++ VAIK L + +++K E + + + P
Sbjct: 21 KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPY 80
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ L+G C+ + L+ + + G L H+ E + + L W ++ IA+ +
Sbjct: 81 VSRLLGICL--TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGM 132
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+YL + +VHRD+ N+L+ S K+ DFGLA + K ++A
Sbjct: 133 SYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA 189
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
E + + ++DV+++GV + EL+T G KP +
Sbjct: 190 LESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDG 224
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 67 VLGRGALSFVFKGKVGL--LRTSVAIKRL-DKEDKESSKAFCRELMIASSL-HHPNIVPL 122
V+G G V K ++ LR AIKR+ + K+ + F EL + L HHPNI+ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 123 VGFCIDPEQGLFLIYKYVSGGSL------ERHLHEKKKGVRGNST---LPWSVRYKVALG 173
+G C + L+L +Y G+L R L NST L A
Sbjct: 82 LGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+A + YL +++ +HRD+ NIL+ + K+ DFGL+ VK T
Sbjct: 141 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--------YVKKT 189
Query: 234 FG-----YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
G ++A E + + +DV+++GV+L E+++
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-------GVRGNSTLPWSVRY 168
H NI+ L+G C + L++I +Y S G+L +L ++ N S +
Sbjct: 78 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 169 KV--ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
V A +A + YL +++C+ HRD+ N+L++ + K+ DFGLA + +
Sbjct: 137 LVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDYY 191
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KT G ++APE + ++DV++FGV+L E+ T
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 19/211 (9%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPL 122
V+GRG V+ G + + A+K L++ D F E +I HPN++ L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAY 180
+G C+ E ++ Y+ G L + N T +V+ + G +A+ + Y
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKY 145
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKT-VKGTFGYLA 238
L + VHRD+ N +L K K+ DFGLA KT K ++A
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
E Q K + K+DV++FGV+L EL+T P
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 71 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 122 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPL 122
V+GRG V+ G + + A+K L++ D F E +I HPN++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAY 180
+G C+ E ++ Y+ G L + +R + P +V+ + G +A+ + Y
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNP-TVKDLIGFGLQVAKGMKY 148
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKT-VKGTFGYLA 238
L + VHRD+ N +L K K+ DFGLA KT K ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
E Q K + K+DV++FGV+L EL+T P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPL 122
V+GRG V+ G + + A+K L++ D F E +I HPN++ L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAY 180
+G C+ E ++ Y+ G L + +R + P +V+ + G +A+ + Y
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDL-------RNFIRNETHNP-TVKDLIGFGLQVAKGMKY 143
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKT-VKGTFGYLA 238
L + VHRD+ N +L K K+ DFGLA KT K ++A
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
E Q K + K+DV++FGV+L EL+T P
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 19/211 (9%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPL 122
V+GRG V+ G + + A+K L++ D F E +I HPN++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAY 180
+G C+ E ++ Y+ G L + N T +V+ + G +A+ + Y
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKY 147
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKT-VKGTFGYLA 238
L + VHRD+ N +L K K+ DFGLA KT K ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
E Q K + K+DV++FGV+L EL+T P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 19/211 (9%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPL 122
V+GRG V+ G + + A+K L++ D F E +I HPN++ L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAY 180
+G C+ E ++ Y+ G L + N T +V+ + G +A+ + Y
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKY 166
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKT-VKGTFGYLA 238
L + VHRD+ N +L K K+ DFGLA KT K ++A
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
E Q K + K+DV++FGV+L EL+T P
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-------GVRGNSTLPWSVRY 168
H NI+ L+G C + L++I +Y S G+L +L ++ N S +
Sbjct: 93 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 169 KV--ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
V A +A + YL +++C+ HRD+ N+L++ + K+ DFGLA + +
Sbjct: 152 LVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDYY 206
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KT G ++APE + ++DV++FGV+L E+ T
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 67 VLGRGALSFVFKGKVGL--LRTSVAIKRL-DKEDKESSKAFCRELMIASSL-HHPNIVPL 122
V+G G V K ++ LR AIKR+ + K+ + F EL + L HHPNI+ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 123 VGFCIDPEQGLFLIYKYVSGGSL------ERHLHEKKKGVRGNST---LPWSVRYKVALG 173
+G C + L+L +Y G+L R L NST L A
Sbjct: 92 LGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+A + YL +++ +HRD+ NIL+ + K+ DFGL+ VK T
Sbjct: 151 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--------YVKKT 199
Query: 234 FG-----YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
G ++A E + + +DV+++GV+L E+++
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 67 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 120
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 56 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 178
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 165
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKT-VKGTFGY 236
YL + VHRD+ N +L K K+ DFGLA KT K +
Sbjct: 166 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
+A E Q K + K+DV++FGV+L EL+T P
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 36/228 (15%)
Query: 62 FSKGRVLGRGALSF-----------VFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMI 110
+ +GR LG+G + VF GKV + S+ +K KE + E+ I
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKV--VPKSMLLKPHQKEKMST------EIAI 95
Query: 111 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 170
SL +P++V GF D + ++++ + SL LH+++K V T P RY +
Sbjct: 96 HKSLDNPHVVGFHGFFED-DDFVYVVLEICRRRSL-LELHKRRKAV----TEP-EARYFM 148
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT--SAPSVPFLCK 228
I + V YLHN V+HRD+K N+ L+ K+ DFGLAT LC
Sbjct: 149 RQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC- 203
Query: 229 TVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
GT Y+APE S + D+++ G +L LL G+ P E L+
Sbjct: 204 ---GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK 248
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 19/211 (9%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPL 122
V+GRG V+ G + + A+K L++ D F E +I HPN++ L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAY 180
+G C+ E ++ Y+ G L + N T +V+ + G +A+ + Y
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKY 140
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKT-VKGTFGYLA 238
L + VHRD+ N +L K K+ DFGLA KT K ++A
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
E Q K + K+DV++FGV+L EL+T P
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 26/256 (10%)
Query: 31 RKIQSLERSISPVANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAI 90
RK ++++ +S +++ ++ ++ ++ +V+GRGA V + R A+
Sbjct: 47 RKNKNIDNFLSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAM 104
Query: 91 KRLDKED---KESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 147
K L K + + S F E I + + P +V L + ++ L+++ +Y+ GG L
Sbjct: 105 KLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDL-- 161
Query: 148 HLHEKKKGVRGNSTLP--WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 205
+ N +P W+ Y AE V L +HRD+KP N+LL
Sbjct: 162 ------VNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 210
Query: 206 IPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ----HGKVSDKTDVYAFGVVLL 261
KL DFG + + C T GT Y++PE + G + D ++ GV L
Sbjct: 211 HLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 269
Query: 262 ELLTGRKPIEARRLQG 277
E+L G P A L G
Sbjct: 270 EMLVGDTPFYADSLVG 285
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 62 FSKGRVLGRGALSF-----------VFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMI 110
+ +GR LG+G + VF GKV + S+ +K KE + E+ I
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKV--VPKSMLLKPHQKEKMST------EIAI 79
Query: 111 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 170
SL +P++V GF D + ++++ + SL LH+++K V T P RY +
Sbjct: 80 HKSLDNPHVVGFHGFFED-DDFVYVVLEICRRRSL-LELHKRRKAV----TEP-EARYFM 132
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 230
I + V YLHN V+HRD+K N+ L+ K+ DFGLAT K +
Sbjct: 133 RQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE--RKKDL 186
Query: 231 KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT Y+APE S + D+++ G +L LL G+ P E
Sbjct: 187 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 228
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG GA V+K + A K +D + +E + + E+ I +S HPNIV L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD-AF 103
Query: 128 DPEQGLFLIYKYVSGGS-------LERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
E L+++ ++ +GG+ LER L E + V TL +++ Y
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-------------DALNY 150
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA---TWTSAPSVPFLCKTVKGTFGYL 237
LH+ ++HRD+K NIL + KL DFG++ T T F+ GT ++
Sbjct: 151 LHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-----GTPYWM 202
Query: 238 APEYFQHGKVSD-----KTDVYAFGVVLLELLTGRKP 269
APE D K DV++ G+ L+E+ P
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 26/256 (10%)
Query: 31 RKIQSLERSISPVANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAI 90
RK ++++ +S +++ ++ ++ ++ +V+GRGA V + R A+
Sbjct: 42 RKNKNIDNFLSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAM 99
Query: 91 KRLDKED---KESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 147
K L K + + S F E I + + P +V L + ++ L+++ +Y+ GG L
Sbjct: 100 KLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDL-- 156
Query: 148 HLHEKKKGVRGNSTLP--WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 205
+ N +P W+ Y AE V L +HRD+KP N+LL
Sbjct: 157 ------VNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 205
Query: 206 IPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ----HGKVSDKTDVYAFGVVLL 261
KL DFG + + C T GT Y++PE + G + D ++ GV L
Sbjct: 206 HLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 264
Query: 262 ELLTGRKPIEARRLQG 277
E+L G P A L G
Sbjct: 265 EMLVGDTPFYADSLVG 280
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 65 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIV 120
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 75 KLIG--VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRDI N+L+S+ KL DFGL+ + S + K ++APE
Sbjct: 133 ---------VHRDIAARNVLVSATDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPE 182
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+ + +DV+ FGV + E+L G KP +
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 26/256 (10%)
Query: 31 RKIQSLERSISPVANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAI 90
RK ++++ +S +++ ++ ++ ++ +V+GRGA V + R A+
Sbjct: 47 RKNKNIDNFLSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAM 104
Query: 91 KRLDKED---KESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 147
K L K + + S F E I + + P +V L + ++ L+++ +Y+ GG L
Sbjct: 105 KLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDL-- 161
Query: 148 HLHEKKKGVRGNSTLP--WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 205
+ N +P W+ Y AE V L +HRD+KP N+LL
Sbjct: 162 ------VNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 210
Query: 206 IPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ----HGKVSDKTDVYAFGVVLL 261
KL DFG + + C T GT Y++PE + G + D ++ GV L
Sbjct: 211 HLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 269
Query: 262 ELLTGRKPIEARRLQG 277
E+L G P A L G
Sbjct: 270 EMLVGDTPFYADSLVG 285
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 35/216 (16%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG GA V+K + A K +D + +E + + E+ I +S HPNIV L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD-AF 103
Query: 128 DPEQGLFLIYKYVSGGS-------LERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
E L+++ ++ +GG+ LER L E + V TL +++ Y
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-------------DALNY 150
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK--TVKGTFGYLA 238
LH+ ++HRD+K NIL + KL DFG+ SA + + + + GT ++A
Sbjct: 151 LHDNK---IIHRDLKAGNILFTLDGDIKLADFGV----SAKNTRXIQRRDSFIGTPYWMA 203
Query: 239 PEYFQHGKVSD-----KTDVYAFGVVLLELLTGRKP 269
PE D K DV++ G+ L+E+ P
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Query: 107 ELMIASSLHHPNIVPLVGFCID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS 165
E+ + L HPNIV ID L+++ +Y GG L + KG + L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI---TKGTKERQYLDEE 111
Query: 166 VRYKVALGIAESVAYLHNGTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSV 223
+V + ++ H ++ V+HRD+KP+N+ L K+ KL DFGLA +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED 171
Query: 224 PFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
K GT Y++PE ++K+D+++ G +L EL P A
Sbjct: 172 --FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA 218
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 62 FSKGRVLGRGALSF-----------VFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMI 110
+ +GR LG+G + VF GKV + S+ +K KE + E+ I
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKV--VPKSMLLKPHQKEKMST------EIAI 95
Query: 111 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 170
SL +P++V GF D + ++++ + SL LH+++K V T P RY +
Sbjct: 96 HKSLDNPHVVGFHGFFED-DDFVYVVLEICRRRSL-LELHKRRKAV----TEP-EARYFM 148
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 230
I + V YLHN V+HRD+K N+ L+ K+ DFGLAT K +
Sbjct: 149 RQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE--RKKDL 202
Query: 231 KGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
GT Y+APE S + D+++ G +L LL G+ P E L+
Sbjct: 203 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK 248
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 28/240 (11%)
Query: 57 AATHNFSKGRVLGRGALSFVF---KGKVGLLRTSVAIKRLDK-----EDKESSKAFCREL 108
A F +VLG+G+ VF K R A+K L K D+ +K E
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM---ER 77
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I ++HP IV L + E L+LI ++ GG L L ++ + V++
Sbjct: 78 DILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED------VKF 130
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+A +A ++ +LH+ +++RD+KP NILL + KL DFGL S S+ K
Sbjct: 131 YLA-ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGL----SKESIDHEKK 182
Query: 229 TVK--GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAK 286
GT Y+APE + D ++FGV++ E+LTG P + + + ++L AK
Sbjct: 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK 242
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 73 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGF- 125
+ RG V+K + L+ VA+K +DK+S ++ RE+ + H N++ +
Sbjct: 22 IKARGRFGCVWKAQ--LMNDFVAVKIFPLQDKQSWQSE-REIFSTPGMKHENLLQFIAAE 78
Query: 126 --CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ E L+LI + GSL +L +GN + W+ VA ++ ++YLH
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYL-------KGN-IITWNELCHVAETMSRGLSYLHE 130
Query: 184 GTERC--------VVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
C + HRD K N+LL S L DFGLA P GT
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRR 190
Query: 236 YLAPEYFQHGKVSD------KTDVYAFGVVLLELLTGRK----PIEARRLQGEENL 281
Y+APE + G ++ + D+YA G+VL EL++ K P++ L EE +
Sbjct: 191 YMAPEVLE-GAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEI 245
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 61 NFSKGRVLGRGALSFVF----KGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH 116
+F+ VLG+G+ V KG L + K + +D + + ++A
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P + L C L+ + +YV+GG L H+ + G P +V Y A IA
Sbjct: 81 PFLTQLHS-CFQTMDRLYFVMEYVNGGDLMYHIQQ-----VGRFKEPHAVFY--AAEIAI 132
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA---TWTSAPSVPFLCKTVKGT 233
+ +L + + +++RD+K N++L S+ K+ DFG+ W + F GT
Sbjct: 133 GLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC-----GT 184
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
Y+APE + D +AFGV+L E+L G+ P E
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 28/240 (11%)
Query: 57 AATHNFSKGRVLGRGALSFVF---KGKVGLLRTSVAIKRLDK-----EDKESSKAFCREL 108
A F +VLG+G+ VF K R A+K L K D+ +K E
Sbjct: 22 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM---ER 78
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I ++HP IV L + E L+LI ++ GG L L ++ + V++
Sbjct: 79 DILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED------VKF 131
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+A +A ++ +LH+ +++RD+KP NILL + KL DFGL S S+ K
Sbjct: 132 YLA-ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGL----SKESIDHEKK 183
Query: 229 TVK--GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAK 286
GT Y+APE + D ++FGV++ E+LTG P + + + ++L AK
Sbjct: 184 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK 243
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIVPLVG 124
+ LG GA V + +VA+K +D K + + +E+ I L+H N+V G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 125 FCIDPE-QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
+ Q LFL +Y SGG L + + +P + + V YLH
Sbjct: 72 HRREGNIQYLFL--EYCSGGELFDR-------IEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
+ HRDIKP N+LL + K+ DFGLAT + L + GT Y+APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 244 HGKV-SDKTDVYAFGVVLLELLTGRKP 269
+ ++ DV++ G+VL +L G P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 122/267 (45%), Gaps = 33/267 (12%)
Query: 27 ELKWRKIQSLERSISPVANSLIRLSYGEILAATHN-FSKGRVLGRGALSFVFKGKV-GLL 84
E++W+ ++ + + + V +L Y N S G+ LG GA V + GL+
Sbjct: 6 EVQWKVVEEINGN-NXVXIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLI 64
Query: 85 RTSVAIKRLDKEDKESS-----KAFCRELMIASSL-HHPNIVPLVGFCIDPEQGLFLIYK 138
++ A+ K K S+ +A EL + S L +H NIV L+G C L +I +
Sbjct: 65 KSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL-VITE 123
Query: 139 YVSGGSLERHLHEKKKGVRGNSTLP---------------WSVRYKVALGIAESVAYLHN 183
Y G L L K+ + T P S Y+VA G+A +L
Sbjct: 124 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA----FL-- 177
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++ C+ HRD+ NILL+ +I K+CDFGLA S + + ++APE
Sbjct: 178 ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 236
Query: 244 HGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ + ++DV+++G+ L EL + G P
Sbjct: 237 NCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 35/216 (16%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG GA V+K + A K +D + +E + + E+ I +S HPNIV L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD-AF 103
Query: 128 DPEQGLFLIYKYVSGGS-------LERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
E L+++ ++ +GG+ LER L E + V TL +++ Y
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-------------DALNY 150
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK--TVKGTFGYLA 238
LH+ ++HRD+K NIL + KL DFG+ SA + + + GT ++A
Sbjct: 151 LHDNK---IIHRDLKAGNILFTLDGDIKLADFGV----SAKNTRXIQRRDXFIGTPYWMA 203
Query: 239 PEYFQHGKVSD-----KTDVYAFGVVLLELLTGRKP 269
PE D K DV++ G+ L+E+ P
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 28/240 (11%)
Query: 57 AATHNFSKGRVLGRGALSFVF---KGKVGLLRTSVAIKRLDK-----EDKESSKAFCREL 108
A F +VLG+G+ VF K R A+K L K D+ +K E
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM---ER 77
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I ++HP IV L + E L+LI ++ GG L L ++ + V++
Sbjct: 78 DILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED------VKF 130
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+A +A ++ +LH+ +++RD+KP NILL + KL DFGL S S+ K
Sbjct: 131 YLA-ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGL----SKESIDHEKK 182
Query: 229 TVK--GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAK 286
GT Y+APE + D ++FGV++ E+LTG P + + + ++L AK
Sbjct: 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK 242
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 99/227 (43%), Gaps = 36/227 (15%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKED---KESSKAFCRELMIASSLHHP 117
+V+GRGA G+V L+R A+K L K + + S F E I + + P
Sbjct: 81 KVIGRGAF-----GEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 118 NIVPLVGFC-IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP--WSVRYKVALGI 174
+V L FC ++ L+++ +Y+ GG L + N +P W+ Y
Sbjct: 136 WVVQL--FCAFQDDKYLYMVMEYMPGGDL--------VNLMSNYDVPEKWAKFY-----T 180
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
AE V L ++HRD+KP N+LL KL DFG + C T GT
Sbjct: 181 AEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM-VHCDTAVGTP 239
Query: 235 GYLAPEYFQ----HGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQG 277
Y++PE + G + D ++ GV L E+L G P A L G
Sbjct: 240 DYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG 286
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVP 121
+++ +G+GA V+ VAI++++ + + + E+++ +PNIV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 122 -LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L + + E L+++ +Y++GGSL + E + + V +++ +
Sbjct: 82 YLDSYLVGDE--LWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALEF 131
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK--TVKGTFGYLA 238
LH+ V+HRDIK NILL KL DFG A P K T+ GT ++A
Sbjct: 132 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFC----AQITPEQSKRSTMVGTPYWMA 184
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
PE K D+++ G++ +E++ G P
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 65 GRVLGRGALSFVFKGKVGLLRT---SVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIV 120
GR +G G V +G +VAIK +S + F +E + HP+IV
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L+G + E +++I + + G L L +K + S + ++ + AL ES +
Sbjct: 455 KLIG--VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
VHRDI N+L+S+ KL DFGL+ + S + K ++APE
Sbjct: 513 ---------VHRDIAARNVLVSATDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPE 562
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEA 272
+ + +DV+ FGV + E+L G KP +
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIV 120
F+K +G+G+ VFKG + VAIK +D +E ++ + +E+ + S P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
G + + L++I +Y+ GGS L + G + + +R I + + Y
Sbjct: 69 KYYGSYLK-DTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILR-----EILKGLDY 119
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
LH+ + +HRDIK +N+LLS KL DFG+A + + T GT ++APE
Sbjct: 120 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPE 174
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
+ K D+++ G+ +EL G P
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 66 RVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVP 121
+V+G G V G + G VAIK L E + F E I HPN++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L G + + +I +++ GSL+ L + G T+ V + GIA + YL
Sbjct: 99 LEG-VVTKSTPVMIITEFMENGSLDSFLRQND----GQFTVIQLV--GMLRGIAAGMKYL 151
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW-TSAPSVPFLCKTVKGTFG--YLA 238
+ VHRD+ NIL++S + K+ DFGL+ + S P + G + A
Sbjct: 152 ---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 208
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
PE Q+ K + +DV+++G+V+ E+++ G +P
Sbjct: 209 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 68 LGRGALSFVFKGKVGLL-----RTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPL 122
LG GA VF + L + VA+K L + + + + F RE + + L H +IV
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVR----GNSTLPWSVRYKVALGIAESV 178
G C + + L ++++Y+ G L R L + G P + L +A V
Sbjct: 86 FGVCTE-GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 179 A----YLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A YL VHRD+ N L+ + K+ DFG++ + +
Sbjct: 145 AAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
++ PE + K + ++DV++FGVVL E+ T G++P
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 68 LGRGALSFVFKGKVGLL-----RTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPL 122
LG GA VF + L + VA+K L + + + + F RE + + L H +IV
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVR----GNSTLPWSVRYKVALGIAESV 178
G C + + L ++++Y+ G L R L + G P + L +A V
Sbjct: 80 FGVCTE-GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 179 A----YLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A YL VHRD+ N L+ + K+ DFG++ + +
Sbjct: 139 AAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
++ PE + K + ++DV++FGVVL E+ T G++P
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIV 120
F+K +G+G+ VFKG + VAIK +D +E ++ + +E+ + S P +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
G + + L++I +Y+ GGS L + G + + +R I + + Y
Sbjct: 89 KYYGSYLK-DTKLWIIMEYLGGGS---ALDLLEPGPLDETQIATILR-----EILKGLDY 139
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
LH+ + +HRDIK +N+LLS KL DFG+A + + T GT ++APE
Sbjct: 140 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPE 194
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
+ K D+++ G+ +EL G P
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 61 NFSKGRVLGRGALSFVF----KGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHH 116
+F+ VLG+G+ V KG L + K + +D + + ++A
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P + L C L+ + +YV+GG L H+ + G P +V Y A IA
Sbjct: 402 PFLTQLHS-CFQTMDRLYFVMEYVNGGDLMYHIQQ-----VGRFKEPHAVFY--AAEIAI 453
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT---WTSAPSVPFLCKTVKGT 233
+ +L + + +++RD+K N++L S+ K+ DFG+ W + F GT
Sbjct: 454 GLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC-----GT 505
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
Y+APE + D +AFGV+L E+L G+ P E
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 68 LGRGALSFVFKGKVGLL-----RTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPL 122
LG GA VF + L + VA+K L + + + + F RE + + L H +IV
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVR----GNSTLPWSVRYKVALGIAESV 178
G C + + L ++++Y+ G L R L + G P + L +A V
Sbjct: 109 FGVCTE-GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 179 A----YLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A YL VHRD+ N L+ + K+ DFG++ + +
Sbjct: 168 AAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
++ PE + K + ++DV++FGVVL E+ T G++P
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 89
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 145
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 200
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 201 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 76
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 132
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 39/228 (17%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA--FCRELMIASSLH-HPNIVPLVG 124
LG+GA V+K VA+K++ + S+ A RE+MI + L H NIV L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 125 FC-IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
D ++ ++L++ Y +E LH +R N P +Y V + + + YLH+
Sbjct: 77 VLRADNDRDVYLVFDY-----METDLH---AVIRANILEPVHKQY-VVYQLIKVIKYLHS 127
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLA--------------------TWTSAPSV 223
G ++HRD+KPSNILL+++ K+ DFGL+ T
Sbjct: 128 GG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 224 PFLCKTVKGTFGYLAPE-YFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
P L V T Y APE K + D+++ G +L E+L G KPI
Sbjct: 185 PILTDYV-ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 122/256 (47%), Gaps = 30/256 (11%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + + +G GA V +L +VA+K+L + +++ +K REL++ ++H NI
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 120 VPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
+ L+ ++ Q ++L+ + + +L + +H + R + L Y++ GI
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIHMELDHERMSYLL-----YQMLCGI 137
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
+LH+ ++HRD+KPSNI++ S K+ DFGLA S F+ T
Sbjct: 138 K----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTASTNFMMTPYVVTR 187
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMA 294
Y APE + D+++ G ++ EL+ G + QG +++ W K I G
Sbjct: 188 YYRAPEVILGMGYKENVDIWSVGCIMGELVKG-----SVIFQGTDHIDQWNKVIEQLGTP 242
Query: 295 AVEELLDPRLKCTSRN 310
+ E + L+ T RN
Sbjct: 243 SAEFM--AALQPTVRN 256
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 34/225 (15%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V +GL + T VA+K L D +K+ S M+
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP------------ 163
H NI+ L+G C + L++I +Y S G+L +L ++ S P
Sbjct: 93 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 164 -WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 222
S Y+VA G+ YL +++C+ HRD+ N+L++ + K+ DFGLA
Sbjct: 152 LVSCAYQVARGME----YL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLA--RDIHH 202
Query: 223 VPFLCKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
+ KT G ++APE + ++DV++FGV+L E+ T
Sbjct: 203 IDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 67 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 120
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 37 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 178
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 146
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV--KGTFGY 236
+L + VHRD+ N +L K K+ DFGLA + K +
Sbjct: 147 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
+A E Q K + K+DV++FGV+L EL+T P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 24/238 (10%)
Query: 57 AATHNFSKGRVLGRGALSFVF------KGKVGLLRTSVAIKR--LDKEDKESSKAFCREL 108
A +F +VLG+G+ VF + G L +K+ L D+ +K E
Sbjct: 25 ADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM---ER 81
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I + ++HP +V L + E L+LI ++ GG L L ++ + V++
Sbjct: 82 DILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED------VKF 134
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+A +A + +LH+ +++RD+KP NILL + KL DFGL+ A
Sbjct: 135 YLA-ELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAY 188
Query: 229 TVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAK 286
+ GT Y+APE S D +++GV++ E+LTG P + + + L+L AK
Sbjct: 189 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAK 246
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 30/217 (13%)
Query: 66 RVLGRGALSFVFK---------GKV---GLLRTSVAIKRLDKEDKESSKAFCRELMIASS 113
RVLG+G VF+ GK+ +L+ ++ ++ + +D +KA E I
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR--NAKDTAHTKA---ERNILEE 77
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
+ HP IV L+ + L+LI +Y+SGG L L +++G+ T + Y +
Sbjct: 78 VKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDT---ACFYLAEIS 131
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+A + +LH ++ +++RD+KP NI+L+ + KL DFGL + + GT
Sbjct: 132 MA--LGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCGT 184
Query: 234 FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y+APE + D ++ G ++ ++LTG P
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPL 122
V+GRG V+ G + + A+K L++ D F E +I HPN++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAY 180
+G C+ E ++ Y+ G L + N T +V+ + G +A+ + +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKF 149
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV--KGTFGYLA 238
L + VHRD+ N +L K K+ DFGLA + K ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
E Q K + K+DV++FGV+L EL+T P
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 104
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 160
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 215
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 216 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPL 122
V+GRG V+ G + + A+K L++ D F E +I HPN++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAY 180
+G C+ E ++ Y+ G L + N T +V+ + G +A+ + +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKF 146
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV--KGTFGYLA 238
L + VHRD+ N +L K K+ DFGLA + K ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
E Q K + K+DV++FGV+L EL+T P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 122/267 (45%), Gaps = 33/267 (12%)
Query: 27 ELKWRKIQSLERSISPVANSLIRLSYGEILAATHN-FSKGRVLGRGALSFVFKGKV-GLL 84
E++W+ ++ + + + V +L Y N S G+ LG GA V + GL+
Sbjct: 13 EVQWKVVEEINGN-NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLI 71
Query: 85 RTSVAIKRLDKEDKESS-----KAFCRELMIASSL-HHPNIVPLVGFCIDPEQGLFLIYK 138
++ A+ K K S+ +A EL + S L +H NIV L+G C L +I +
Sbjct: 72 KSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL-VITE 130
Query: 139 YVSGGSLERHLHEKKKGVRGNSTLP---------------WSVRYKVALGIAESVAYLHN 183
Y G L L K+ + T P S Y+VA G+A +L
Sbjct: 131 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA----FL-- 184
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++ C+ HRD+ NILL+ +I K+CDFGLA S + + ++APE
Sbjct: 185 ASKNCI-HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIF 243
Query: 244 HGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ + ++DV+++G+ L EL + G P
Sbjct: 244 NCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC---RELMIASSLHHP 117
++ G LG G V G+ L VA+K L+++ S RE+ HP
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIA 175
+I+ L P F++ +YVSGG L ++ H + + + ++ I
Sbjct: 72 HIIKLYQVISTPTD-FFMVMEYVSGGELFDYICKHGRVEEMEAR---------RLFQQIL 121
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+V Y H VVHRD+KP N+LL + K+ DFGL+ S +T G+
Sbjct: 122 SAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRTSCGSPN 175
Query: 236 YLAPEYFQHGKV--SDKTDVYAFGVVLLELLTGRKPIE 271
Y APE G++ + D+++ GV+L LL G P +
Sbjct: 176 YAAPEVIS-GRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 67 VLGRGALSFVFKGKVGL--LRTSVAIKRL-DKEDKESSKAFCRELMIASSL-HHPNIVPL 122
V+G G V K ++ LR AIKR+ + K+ + F EL + L HHPNI+ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 123 VGFCIDPEQGLFLIYKYVSGGSL------ERHLHEKKKGVRGNST---LPWSVRYKVALG 173
+G C + L+L +Y G+L R L NST L A
Sbjct: 89 LGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+A + YL +++ +HR++ NIL+ + K+ DFGL+ VK T
Sbjct: 148 VARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEV--------YVKKT 196
Query: 234 FG-----YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
G ++A E + + +DV+++GV+L E+++
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 67 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 120
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 96 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 178
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 205
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV--KGTFGY 236
+L + VHRD+ N +L K K+ DFGLA + K +
Sbjct: 206 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
+A E Q K + K+DV++FGV+L EL+T P
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 97/217 (44%), Gaps = 27/217 (12%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF-CRELMIASSLHHPNI 119
+++ +V+G G+ V++ K+ VAIK++ + KAF REL I L H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 120 VPLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
V L F E L L+ YV H R TLP +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQL 131
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLCKTVK 231
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 232 GTFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 188 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 100/219 (45%), Gaps = 26/219 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 155
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV E + R TLP +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 211
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 212 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 266
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y APE F + DV++ G VL ELL G +PI
Sbjct: 267 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 301
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 110
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 166
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 221
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y APE F + DV++ G VL ELL G +PI
Sbjct: 222 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 256
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 100/219 (45%), Gaps = 26/219 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 81
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV E + R TLP +
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 138 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 192
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y APE F + DV++ G VL ELL G +PI
Sbjct: 193 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 227
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 170
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 100 HKNIITLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 171 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA ++ +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA--RDINNIDYY 213
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KT G ++APE + ++DV++FGV++ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 67 VLGRGALSFVFKGKVGLL-----RTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIV 120
V+GRG V+ G LL + A+K L++ D F E +I HPN++
Sbjct: 38 VIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESV 178
L+G C+ E ++ Y+ G L + N T +V+ + G +A+ +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGM 147
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV--KGTFGY 236
+L + VHRD+ N +L K K+ DFGLA + K +
Sbjct: 148 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
+A E Q K + K+DV++FGV+L EL+T P
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 122/267 (45%), Gaps = 33/267 (12%)
Query: 27 ELKWRKIQSLERSISPVANSLIRLSYGEILAATHN-FSKGRVLGRGALSFVFKGKV-GLL 84
E++W+ ++ + + + V +L Y N S G+ LG GA V + GL+
Sbjct: 8 EVQWKVVEEINGN-NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLI 66
Query: 85 RTSVAIKRLDKEDKESS-----KAFCRELMIASSL-HHPNIVPLVGFCIDPEQGLFLIYK 138
++ A+ K K S+ +A EL + S L +H NIV L+G C L +I +
Sbjct: 67 KSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL-VITE 125
Query: 139 YVSGGSLERHLHEKKKGVRGNSTLP---------------WSVRYKVALGIAESVAYLHN 183
Y G L L K+ + T P S Y+VA G+A +L
Sbjct: 126 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA----FL-- 179
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++ C+ HRD+ NILL+ +I K+CDFGLA S + + ++APE
Sbjct: 180 ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 238
Query: 244 HGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ + ++DV+++G+ L EL + G P
Sbjct: 239 NCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 97/217 (44%), Gaps = 27/217 (12%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF-CRELMIASSLHHPNI 119
+++ +V+G G+ V++ K+ VAIK++ + KAF REL I L H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 120 VPLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
V L F E L L+ YV H R TLP +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQL 131
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLCKTVK 231
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 232 GTFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 188 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPL 122
V+GRG V+ G + + A+K L++ D F E +I HPN++ L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAY 180
+G C+ E ++ Y+ G L + N T +V+ + G +A+ + +
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKF 153
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV--KGTFGYLA 238
L + VHRD+ N +L K K+ DFGLA + K ++A
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
E Q K + K+DV++FGV+L EL+T P
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 22/248 (8%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 125
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN- 90
Query: 126 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 184
P++ L Y+ ++ +L + + + + + + Y++ +GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLVGIK----HLHSA 145
Query: 185 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQH 244
++HRD+KPSNI++ S K+ DFGLA T+ S F+ T Y APE
Sbjct: 146 ---GIIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTS--FMMTPYVVTRYYRAPEVILG 199
Query: 245 GKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMAAVEEL--LDP 302
+ D+++ GV++ E++ G G +++ W K I G + E + L P
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKG-----GVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 303 RLKCTSRN 310
++ N
Sbjct: 255 TVRTYVEN 262
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 112
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 168
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 223
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 224 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 114
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 170
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V ++C
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 225
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 226 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPL 122
V+GRG V+ G + + A+K L++ D F E +I HPN++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG--IAESVAY 180
+G C+ E ++ Y+ G L + N T +V+ + G +A+ + +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKF 148
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV--KGTFGYLA 238
L + VHRD+ N +L K K+ DFGLA + K ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
E Q K + K+DV++FGV+L EL+T P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPK----LCDFGLATWTSAPSVPFLCKTVK 231
V YLH+ + H D+KP NI+L + +PK + DFGLA + K +
Sbjct: 125 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 178
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+F + VLG+GA V K + L AIK++ + +E E+M+ +SL+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 121 --------------PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
P+ + + LF+ +Y G+L +H + + +
Sbjct: 66 RYYAAWLERRNFVKPMT--AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY----- 118
Query: 167 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA----------- 215
+++ I E+++Y+H+ + ++HRD+KP NI + + K+ DFGLA
Sbjct: 119 -WRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 216 -TWTSAPSVPFLCKTVKGTFGYLAPEYFQ-HGKVSDKTDVYAFGVVLLELL 264
+ P + GT Y+A E G ++K D+Y+ G++ E++
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 98/230 (42%), Gaps = 30/230 (13%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD---------KEDKESSKAFCRELMIA 111
N+ +LGRG S V + A+K +D +E +E +A +E+ I
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 112 SSLH-HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 170
+ HPNI+ L + FL++ + G L +L EK TL K+
Sbjct: 78 RKVSGHPNIIQLKD-TYETNTFFFLVFDLMKKGELFDYLTEK-------VTLSEKETRKI 129
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 230
+ E + LH +VHRD+KP NILL KL DFG + ++V
Sbjct: 130 MRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LRSV 183
Query: 231 KGTFGYLAPEYFQ------HGKVSDKTDVYAFGVVLLELLTGRKPIEARR 274
GT YLAPE + H + D+++ GV++ LL G P R+
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 122/267 (45%), Gaps = 33/267 (12%)
Query: 27 ELKWRKIQSLERSISPVANSLIRLSYGEILAATHN-FSKGRVLGRGALSFVFKGKV-GLL 84
E++W+ ++ + + + V +L Y N S G+ LG GA V + GL+
Sbjct: 13 EVQWKVVEEINGN-NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLI 71
Query: 85 RTSVAIKRLDKEDKESS-----KAFCRELMIASSL-HHPNIVPLVGFCIDPEQGLFLIYK 138
++ A+ K K S+ +A EL + S L +H NIV L+G C L +I +
Sbjct: 72 KSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL-VITE 130
Query: 139 YVSGGSLERHLHEKKKGVRGNSTLP---------------WSVRYKVALGIAESVAYLHN 183
Y G L L K+ + T P S Y+VA G+A +L
Sbjct: 131 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA----FL-- 184
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++ C+ HRD+ NILL+ +I K+CDFGLA S + + ++APE
Sbjct: 185 ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 243
Query: 244 HGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ + ++DV+++G+ L EL + G P
Sbjct: 244 NCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 31/233 (13%)
Query: 60 HNFSKGRVLGRGALSFVFKGKV-GLLRTSVAIKRLDKEDKESS-----KAFCRELMIASS 113
+ S G+ LG GA V + GL+++ A+ K K S+ +A EL + S
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 114 L-HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLP--------- 163
L +H NIV L+G C L +I +Y G L L K+ + T P
Sbjct: 83 LGNHMNIVNLLGACTIGGPTL-VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141
Query: 164 ------WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 217
S Y+VA G+A +L ++ C+ HRD+ NILL+ +I K+CDFGLA
Sbjct: 142 LDLEDLLSFSYQVAKGMA----FL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARD 194
Query: 218 TSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
S + + ++APE + + ++DV+++G+ L EL + G P
Sbjct: 195 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYK- 169
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 100 HKNIIHLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 170 ---VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+A + YL +++C+ HRD+ N+L++ + K+ DFGLA ++ +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA--RDINNIDYY 213
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KT G ++APE + ++DV++FGV++ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 28/258 (10%)
Query: 27 ELKWRKIQSLERS----ISPVANSLIRLSYGEILA-ATHNFSKGRVLGRGALSFVFKGKV 81
+++W+ I+S E + I P +L Y E +N G+ LG GA V +
Sbjct: 13 QVRWKIIESYEGNSYTFIDPT-----QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATA 67
Query: 82 -GLLRTS----VAIKRLDKEDKESSK-AFCRELMIASSL-HHPNIVPLVGFCIDPEQGLF 134
GL + VA+K L K A EL I S L H NIV L+G C +
Sbjct: 68 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP-VL 126
Query: 135 LIYKYVSGGSLERHLHEKKKGVR-------GNSTLPWSVRYKVALGIAESVAYLHNGTER 187
+I +Y G L L K + + NSTL + +A+ +A+L ++
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL--ASKN 184
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV 247
C+ HRD+ N+LL++ + K+ DFGLA S + + ++APE
Sbjct: 185 CI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 243
Query: 248 SDKTDVYAFGVVLLELLT 265
+ ++DV+++G++L E+ +
Sbjct: 244 TVQSDVWSYGILLWEIFS 261
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 23/254 (9%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKE-DKESSKAFCRELMIA-SSLHHPNIVPLVGF 125
LGRGA V K + +A+KR+ + + K +L I+ ++ P V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
+G I + SL++ K+ + T+P + K+A+ I +++ +LH +
Sbjct: 119 LF--REGDVWICMELMDTSLDKFY---KQVIDKGQTIPEDILGKIAVSIVKALEHLH--S 171
Query: 186 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK-GTFGYLAPEYF-- 242
+ V+HRD+KPSN+L+++ K+CDFG++ + V + KT+ G Y+APE
Sbjct: 172 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL----VDSVAKTIDAGCKPYMAPERINP 227
Query: 243 ---QHGKVSDKTDVYAFGVVLLELLTGRKPIEA--RRLQGEENLVLWAKPILHRGMAAVE 297
Q G S K+D+++ G+ ++EL R P ++ Q + +V P L +
Sbjct: 228 ELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSA- 285
Query: 298 ELLDPRLKCTSRNS 311
E +D +C +NS
Sbjct: 286 EFVDFTSQCLKKNS 299
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 119/272 (43%), Gaps = 36/272 (13%)
Query: 88 VAIKRLDKE-DKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSL 145
VA+K L + + + +E+ I +L+H +I+ G C D E+ L L+ +YV GSL
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 146 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 205
+L G+ + A I E +AYLH+ + +HR++ N+LL + +
Sbjct: 106 RDYLPRHSIGL--------AQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLDNDR 154
Query: 206 IPKLCDFGLATWTSAPSVPFLCKTVKGT--FGYLAPEYFQHGKVSDKTDVYAFGVVLLEL 263
+ K+ DFGLA + + + F Y APE + K +DV++FGV L EL
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYEL 213
Query: 264 LT--------GRKPIEARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRNSXXXX 315
LT K +E + + VL +L RG E L P KC
Sbjct: 214 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG----ERLPRPD-KCPCE------ 262
Query: 316 XXXXXXXXCISSEESRRPGIEEIIAILRGEEE 347
C +E S RP E +I IL+ E
Sbjct: 263 -VYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
E+ I L+HP I+ + F D E +++ + + GG L + K+ L +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 120
Query: 167 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSV 223
Y++ L +V YLH E ++HRD+KP N+LLSS++ + K+ DFG + S
Sbjct: 121 -YQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 171
Query: 224 PFLCKTVKGTFGYLAPEYFQH---GKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ---- 276
L +T+ GT YLAPE + D ++ GV+L L+G P R Q
Sbjct: 172 --LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 229
Query: 277 -----GEENLV--LWAKPILHRGMAAVEELL--DPRLKCTSRNS 311
G+ N + +WA+ + + + V++LL DP+ + T+ +
Sbjct: 230 DQITSGKYNFIPEVWAE-VSEKALDLVKKLLVVDPKARFTTEEA 272
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
E+ I L+HP I+ + F D E +++ + + GG L + K+ L +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 120
Query: 167 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSV 223
Y++ L +V YLH E ++HRD+KP N+LLSS++ + K+ DFG + S
Sbjct: 121 -YQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 171
Query: 224 PFLCKTVKGTFGYLAPEYFQH---GKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ---- 276
L +T+ GT YLAPE + D ++ GV+L L+G P R Q
Sbjct: 172 --LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 229
Query: 277 -----GEENLV--LWAKPILHRGMAAVEELL--DPRLKCTSRNS 311
G+ N + +WA+ + + + V++LL DP+ + T+ +
Sbjct: 230 DQITSGKYNFIPEVWAE-VSEKALDLVKKLLVVDPKARFTTEEA 272
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
E+ I L+HP I+ + F D E +++ + + GG L + K+ L +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 120
Query: 167 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSV 223
Y++ L +V YLH E ++HRD+KP N+LLSS++ + K+ DFG + S
Sbjct: 121 -YQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 171
Query: 224 PFLCKTVKGTFGYLAPEYFQH---GKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ---- 276
L +T+ GT YLAPE + D ++ GV+L L+G P R Q
Sbjct: 172 --LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 229
Query: 277 -----GEENLV--LWAKPILHRGMAAVEELL--DPRLKCTSRNS 311
G+ N + +WA+ + + + V++LL DP+ + T+ +
Sbjct: 230 DQITSGKYNFIPEVWAE-VSEKALDLVKKLLVVDPKARFTTEEA 272
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVP 121
+++ +G+GA V+ VAI++++ + + + E+++ +PNIV
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 122 -LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L + + E L+++ +Y++GGSL + E + + V +++ +
Sbjct: 83 YLDSYLVGDE--LWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALEF 132
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK--TVKGTFGYLA 238
LH+ V+HR+IK NILL KL DFG A P K T+ GT ++A
Sbjct: 133 LHSNQ---VIHRNIKSDNILLGMDGSVKLTDFGFC----AQITPEQSKRSTMVGTPYWMA 185
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
PE K D+++ G++ +E++ G P
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 23/230 (10%)
Query: 66 RVLGRGALS---FVFKGKVGLLRTSVAIKRLDKEDKE-SSKAFCRELMIASSLHHPNIVP 121
R LG GA V + GL R IK ++K+ + + E+ + SL HPNI+
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERV---IKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK 84
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSL-ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
+ D ++++ + GG L ER + + +G L ++ + ++AY
Sbjct: 85 IFEVFED-YHNMYIVMETCEGGELLERIVSAQARG----KALSEGYVAELMKQMMNALAY 139
Query: 181 LHNGTERCVVHRDIKPSNILL--SSKKIP-KLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
H+ + VVH+D+KP NIL +S P K+ DFGLA + GT Y+
Sbjct: 140 FHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE---HSTNAAGTALYM 193
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKP 287
APE F+ V+ K D+++ GVV+ LLTG P L+ + + +P
Sbjct: 194 APEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP 242
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
E+ I L+HP I+ + F D E +++ + + GG L + K+ L +
Sbjct: 64 EIEILKKLNHPCIIKIKNF-FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 119
Query: 167 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSV 223
Y++ L +V YLH E ++HRD+KP N+LLSS++ + K+ DFG + S
Sbjct: 120 -YQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 170
Query: 224 PFLCKTVKGTFGYLAPEYFQH---GKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ---- 276
L +T+ GT YLAPE + D ++ GV+L L+G P R Q
Sbjct: 171 --LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 228
Query: 277 -----GEENLV--LWAKPILHRGMAAVEELL--DPRLKCTSRNS 311
G+ N + +WA+ + + + V++LL DP+ + T+ +
Sbjct: 229 DQITSGKYNFIPEVWAE-VSEKALDLVKKLLVVDPKARFTTEEA 271
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 88 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 147
+ K+L D + + RE I L H NIV L I E +L++ V+GG L
Sbjct: 37 INTKKLSARDHQKLE---REARICRLLKHSNIVRLHD-SISEEGFHYLVFDLVTGGELFE 92
Query: 148 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSK--- 204
+ ++ +++ I E+V + H + VVHRD+KP N+LL+SK
Sbjct: 93 DIVAREYYSEADAS-------HCIQQILEAVLHCH---QMGVVHRDLKPENLLLASKCKG 142
Query: 205 KIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELL 264
KL DFGLA + GT GYL+PE + D++A GV+L LL
Sbjct: 143 AAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILL 200
Query: 265 TGRKPI 270
G P
Sbjct: 201 VGYPPF 206
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 41/232 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 59 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 114 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 167
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL------ATWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG ATWT
Sbjct: 168 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT---- 218
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARR 274
LC GT YLAPE + D +A GV++ E+ G P A +
Sbjct: 219 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 263
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVP 121
+++ +G+GA V+ VAI++++ + + + E+++ +PNIV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 122 -LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L + + E L+++ +Y++GGSL + E + + V +++ +
Sbjct: 82 YLDSYLVGDE--LWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALEF 131
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
LH+ V+HRDIK NILL KL DFG + P + V GT ++APE
Sbjct: 132 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-PEQSKRSEMV-GTPYWMAPE 186
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
K D+++ G++ +E++ G P
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 170
H NI+ L+G C + L++I Y S G+L +L ++ N + +K
Sbjct: 100 HKNIINLLGACTQ-DGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 171 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA ++ +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA--RDINNIDYY 213
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KT G ++APE + ++DV++FGV++ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
E+ I L+HP I+ + F D E +++ + + GG L + K+ L +
Sbjct: 71 EIEILKKLNHPCIIKIKNF-FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 126
Query: 167 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSV 223
Y++ L +V YLH E ++HRD+KP N+LLSS++ + K+ DFG + S
Sbjct: 127 -YQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 177
Query: 224 PFLCKTVKGTFGYLAPEYFQH---GKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ---- 276
L +T+ GT YLAPE + D ++ GV+L L+G P R Q
Sbjct: 178 --LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 235
Query: 277 -----GEENLV--LWAKPILHRGMAAVEELL--DPRLKCTSRNS 311
G+ N + +WA+ + + + V++LL DP+ + T+ +
Sbjct: 236 DQITSGKYNFIPEVWAE-VSEKALDLVKKLLVVDPKARFTTEEA 278
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVP 121
+++ +G+GA V+ VAI++++ + + + E+++ +PNIV
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 122 -LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L + + E L+++ +Y++GGSL + E + + V +++ +
Sbjct: 83 YLDSYLVGDE--LWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALEF 132
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK--TVKGTFGYLA 238
LH+ V+HRDIK NILL KL DFG A P K + GT ++A
Sbjct: 133 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFC----AQITPEQSKRSXMVGTPYWMA 185
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
PE K D+++ G++ +E++ G P
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 123
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 79 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 128
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT-VKGTFGYLAPEYF 242
E VHRD+ N+LL ++ K+ DFGL+ A + +T K + APE
Sbjct: 129 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI 186
Query: 243 QHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEE 279
+ K S K+DV++FGV++ E + G+KP R ++G E
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY--RGMKGSE 222
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD---------KEDKESSKAFCRELMIA 111
N+ +LGRG S V + A+K +D +E +E +A +E+ I
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 112 SSLH-HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 170
+ HPNI+ L + FL++ + G L +L EK TL K+
Sbjct: 65 RKVSGHPNIIQLKD-TYETNTFFFLVFDLMKKGELFDYLTEK-------VTLSEKETRKI 116
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 230
+ E + LH +VHRD+KP NILL KL DFG + + V
Sbjct: 117 MRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREV 170
Query: 231 KGTFGYLAPEYFQ------HGKVSDKTDVYAFGVVLLELLTGRKPIEARR 274
GT YLAPE + H + D+++ GV++ LL G P R+
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 220
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 39/276 (14%)
Query: 61 NFSKGRVLGRGALSFVF------KGKVGLLRTSVAIKRLDKEDKESSKAFCR-ELMIASS 113
NF +VLG GA VF G L +K+ K + R E +
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
+ + + + E L LI Y++GG L HL ++++ ++V +
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER----------FTEHEVQIY 164
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+ E V L + + +++RDIK NILL S L DFGL+ A GT
Sbjct: 165 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGT 223
Query: 234 FGYLAPEYFQHGKVS-DK-TDVYAFGVVLLELLTGRKPIEARRLQGEEN-------LVLW 284
Y+AP+ + G DK D ++ GV++ ELLTG P + GE+N +L
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF---TVDGEKNSQAEISRRILK 280
Query: 285 AKPILHRGMAA-----VEELL--DP--RLKCTSRNS 311
++P + M+A ++ LL DP RL C R++
Sbjct: 281 SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDA 316
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 96/217 (44%), Gaps = 27/217 (12%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF-CRELMIASSLHHPNI 119
+++ +V+G G+ V++ K+ VAIK++ + KAF REL I L H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 120 VPLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
V L F E L L+ YV H R TLP +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYS----RAKQTLPVIYVKLYMYQL 131
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLCKTVK 231
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 232 GTFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 188 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPK----LCDFGLATWTSAPSVPFLCKTVK 231
V YLH+ + H D+KP NI+L + +PK + DFGLA + K +
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 178
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
E+ I L+HP I+ + F D E +++ + + GG L + K+ L +
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 259
Query: 167 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSV 223
Y++ L +V YLH E ++HRD+KP N+LLSS++ + K+ DFG + S
Sbjct: 260 -YQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 310
Query: 224 PFLCKTVKGTFGYLAPEYFQH---GKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ---- 276
L +T+ GT YLAPE + D ++ GV+L L+G P R Q
Sbjct: 311 --LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 368
Query: 277 -----GEENLV--LWAKPILHRGMAAVEELL--DPRLKCTSRNS 311
G+ N + +WA+ + + + V++LL DP+ + T+ +
Sbjct: 369 DQITSGKYNFIPEVWAE-VSEKALDLVKKLLVVDPKARFTTEEA 411
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIV 120
F+K +G+G+ VFKG + VAIK +D +E ++ + +E+ + S P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
G + + L++I +Y+ GGS L + G + + +R I + + Y
Sbjct: 69 KYYGSYLK-DTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILR-----EILKGLDY 119
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
LH+ + +HRDIK +N+LLS KL DFG+A + + GT ++APE
Sbjct: 120 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNXFVGTPFWMAPE 174
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
+ K D+++ G+ +EL G P
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVP 121
+++ +G+GA V+ VAI++++ + + + E+++ +PNIV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 122 -LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
L + + E L+++ +Y++GGSL + E + + V +++ +
Sbjct: 82 YLDSYLVGDE--LWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALEF 131
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK--TVKGTFGYLA 238
LH+ V+HRDIK NILL KL DFG A P K + GT ++A
Sbjct: 132 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFC----AQITPEQSKRSXMVGTPYWMA 184
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
PE K D+++ G++ +E++ G P
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 123
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 85 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 134
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT-VKGTFGYLAPEYF 242
E VHRD+ N+LL ++ K+ DFGL+ A + +T K + APE
Sbjct: 135 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 192
Query: 243 QHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEE 279
+ K S K+DV++FGV++ E + G+KP R ++G E
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY--RGMKGSE 228
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPK----LCDFGLATWTSAPSVPFLCKTVK 231
V YLH+ + H D+KP NI+L + +PK + DFGLA + K +
Sbjct: 125 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 178
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 26/250 (10%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 125
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN- 90
Query: 126 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 184
P++ L Y+ ++ +L + + + + + + Y++ +GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLVGIK----HLHSA 145
Query: 185 TERCVVHRDIKPSNILLSSKKIPKLCDFGLA--TWTSAPSVPFLCKTVKGTFGYLAPEYF 242
++HRD+KPSNI++ S K+ DFGLA TS P++ T Y APE
Sbjct: 146 ---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV-----TRYYRAPEVI 197
Query: 243 QHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMAAVEEL--L 300
+ D+++ GV++ E++ G G +++ W K I G + E + L
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG-----GVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 301 DPRLKCTSRN 310
P ++ N
Sbjct: 253 QPTVRTYVEN 262
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIV 120
F+K +G+G+ VFKG + VAIK +D +E ++ + +E+ + S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE---S 177
G + + L++I +Y+ GGS L P+ +++A + E
Sbjct: 85 KYYGSYLKGSK-LWIIMEYLGGGSALDLLRAG----------PFD-EFQIATMLKEILKG 132
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYL 237
+ YLH+ + +HRDIK +N+LLS + KL DFG+A + + T GT ++
Sbjct: 133 LDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNTFVGTPFWM 187
Query: 238 APEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
APE Q K D+++ G+ +EL G P
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 123
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 73 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 122
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT-VKGTFGYLAPEYF 242
E VHRD+ N+LL ++ K+ DFGL+ A + +T K + APE
Sbjct: 123 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 180
Query: 243 QHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEE 279
+ K S K+DV++FGV++ E + G+KP R ++G E
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY--RGMKGSE 216
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 170
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 100 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 171 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ +A + YL +++C+ HRD+ N+L++ + ++ DFGLA ++ +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMRIADFGLA--RDINNIDYY 213
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KT G ++APE + ++DV++FGV++ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD---------KEDKESSKAFCRELMIA 111
N+ +LGRG S V + A+K +D +E +E +A +E+ I
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 112 SSLH-HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 170
+ HPNI+ L + FL++ + G L +L EK TL K+
Sbjct: 78 RKVSGHPNIIQLKD-TYETNTFFFLVFDLMKKGELFDYLTEK-------VTLSEKETRKI 129
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV 230
+ E + LH +VHRD+KP NILL KL DFG + + V
Sbjct: 130 MRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREV 183
Query: 231 KGTFGYLAPEYFQ------HGKVSDKTDVYAFGVVLLELLTGRKPIEARR 274
GT YLAPE + H + D+++ GV++ LL G P R+
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 123
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 95 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 144
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEYF 242
E VHRD+ N+LL ++ K+ DFGL+ A + +T K + APE
Sbjct: 145 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 243 QHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEE 279
+ K S K+DV++FGV++ E + G+KP R ++G E
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY--RGMKGSE 238
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 123
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 95 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 144
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEYF 242
E VHRD+ N+LL ++ K+ DFGL+ A + +T K + APE
Sbjct: 145 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 243 QHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEE 279
+ K S K+DV++FGV++ E + G+KP R ++G E
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY--RGMKGSE 238
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 123
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 75 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 124
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT-VKGTFGYLAPEYF 242
E VHRD+ N+LL ++ K+ DFGL+ A + +T K + APE
Sbjct: 125 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182
Query: 243 QHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEE 279
+ K S K+DV++FGV++ E + G+KP R ++G E
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY--RGMKGSE 218
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIV 120
F+K +G+G+ VFKG + VAIK +D +E ++ + +E+ + S P +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
G + + L++I +Y+ GGS L + G + + +R I + + Y
Sbjct: 84 KYYGSYLK-DTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILR-----EILKGLDY 134
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
LH+ + +HRDIK +N+LLS KL DFG+A + + GT ++APE
Sbjct: 135 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNXFVGTPFWMAPE 189
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
+ K D+++ G+ +EL G P
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
E+ I L+HP I+ + F D E +++ + + GG L + K+ L +
Sbjct: 190 EIEILKKLNHPCIIKIKNF-FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 245
Query: 167 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSV 223
Y++ L +V YLH E ++HRD+KP N+LLSS++ + K+ DFG + S
Sbjct: 246 -YQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 296
Query: 224 PFLCKTVKGTFGYLAPEYFQH---GKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ---- 276
L +T+ GT YLAPE + D ++ GV+L L+G P R Q
Sbjct: 297 --LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 354
Query: 277 -----GEENLV--LWAKPILHRGMAAVEELL--DPRLKCTSRNS 311
G+ N + +WA+ + + + V++LL DP+ + T+ +
Sbjct: 355 DQITSGKYNFIPEVWAE-VSEKALDLVKKLLVVDPKARFTTEEA 397
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 72 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 123
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPK----LCDFGLATWTSAPSVPFLCKTVK 231
V YLH+ + H D+KP NI+L + +PK + DFGLA + K +
Sbjct: 124 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 177
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 72 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 123
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPK----LCDFGLATWTSAPSVPFLCKTVK 231
V YLH+ + H D+KP NI+L + +PK + DFGLA + K +
Sbjct: 124 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 177
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPK----LCDFGLATWTSAPSVPFLCKTVK 231
V YLH+ + H D+KP NI+L + +PK + DFGLA + K +
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 178
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 87 SVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLE 146
VA+K +D ++ + E++I H N+V + + E+ L+++ +++ GG+L
Sbjct: 72 QVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEE-LWVLMEFLQGGALT 130
Query: 147 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 206
+ + + +T V + +++AYLH + V+HRDIK +ILL+
Sbjct: 131 DIVSQVRLNEEQIAT--------VCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGR 179
Query: 207 PKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTG 266
KL DFG S VP K + GT ++APE + + D+++ G++++E++ G
Sbjct: 180 VKLSDFGFCAQISK-DVPKR-KXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
Query: 267 RKP 269
P
Sbjct: 238 EPP 240
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPK----LCDFGLATWTSAPSVPFLCKTVK 231
V YLH+ + H D+KP NI+L + +PK + DFGLA + K +
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 178
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 170
H NI+ L+G C + L++I Y S G+L +L ++ N + +K
Sbjct: 100 HKNIINLLGACTQ-DGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 171 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA ++ +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA--RDINNIDYY 213
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KT G ++APE + ++DV++FGV++ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 117/272 (43%), Gaps = 36/272 (13%)
Query: 88 VAIKRLDKE-DKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSL 145
VA+K L + + + +E+ I +L+H +I+ G C D L L+ +YV GSL
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 146 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 205
+L G+ + A I E +AYLH + +HRD+ N+LL + +
Sbjct: 123 RDYLPRHSIGL--------AQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDR 171
Query: 206 IPKLCDFGLATWTSAPSVPFLCKTVKGT--FGYLAPEYFQHGKVSDKTDVYAFGVVLLEL 263
+ K+ DFGLA + + + F Y APE + K +DV++FGV L EL
Sbjct: 172 LVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYEL 230
Query: 264 LT--------GRKPIEARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRNSXXXX 315
LT K +E + + VL +L RG E L P KC +
Sbjct: 231 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG----ERLPRPD-KCPAE------ 279
Query: 316 XXXXXXXXCISSEESRRPGIEEIIAILRGEEE 347
C +E S RP E +I IL+ E
Sbjct: 280 -VYHLMKNCWETEASFRPTFENLIPILKTVHE 310
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 123
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 79 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 128
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT-VKGTFGYLAPEYF 242
E VHRD+ N+LL ++ K+ DFGL+ A + +T K + APE
Sbjct: 129 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 186
Query: 243 QHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEE 279
+ K S K+DV++FGV++ E + G+KP R ++G E
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY--RGMKGSE 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 123
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 93 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 142
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTV-KGTFGYLAPEYF 242
E VHRD+ N+LL ++ K+ DFGL+ A + +T K + APE
Sbjct: 143 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 200
Query: 243 QHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEE 279
+ K S K+DV++FGV++ E + G+KP R ++G E
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY--RGMKGSE 236
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPK----LCDFGLATWTSAPSVPFLCKTVK 231
V YLH+ + H D+KP NI+L + +PK + DFGLA + K +
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 178
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPK----LCDFGLATWTSAPSVPFLCKTVK 231
V YLH+ + H D+KP NI+L + +PK + DFGLA + K +
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 178
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 22/235 (9%)
Query: 41 SPVANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFK---GKVGLLRTSVAIKRLDKED 97
+P + ++ G + + + SK +LG G V K GL + IK +D
Sbjct: 71 APFDHRIVTAKQGAV-NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD 129
Query: 98 KESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVR 157
KE K E+ + + L H N++ L + + + L+ +YV GG L + ++ +
Sbjct: 130 KEEVK---NEISVMNQLDHANLIQLYD-AFESKNDIVLVMEYVDGGELFDRIIDESYNLT 185
Query: 158 GNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSK--KIPKLCDFGLA 215
T+ + + I E + ++H + ++H D+KP NIL ++ K K+ DFGLA
Sbjct: 186 ELDTILFMKQ------ICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLA 236
Query: 216 TWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
P K GT +LAPE + VS TD+++ GV+ LL+G P
Sbjct: 237 R-RYKPREKL--KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 80
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 136
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 191
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 192 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIK-RLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 126
+G G V+K + T K RL+KED+ RE+ I L H NIV L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD-V 68
Query: 127 IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK-VALGIAESVAYLHNGT 185
I ++ L L+++++ L++ L + G+ SV K L + +AY H
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLE-------SVTAKSFLLQLLNGIAYCH--- 117
Query: 186 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHG 245
+R V+HRD+KP N+L++ + K+ DFGLA P + + V T Y AP+
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGS 175
Query: 246 -KVSDKTDVYAFGVVLLELLTG 266
K S D+++ G + E++ G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 76
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 132
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 64 KGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
K + LG G+ S K + A+K + K + +++ L + HPNIV L
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLH 72
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
D + FL+ + ++GG L + +KK ++ + + +V+++H+
Sbjct: 73 EVFHD-QLHTFLVMELLNGGELFERIKKKKHFSETEASY-------IMRKLVSAVSHMHD 124
Query: 184 GTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
VVHRD+KP N+L + + K+ DFG A + P KT T Y APE
Sbjct: 125 VG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL--KTPCFTLHYAAPE 179
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKPIEAR 273
+ D+++ GV+L +L+G+ P ++
Sbjct: 180 LLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH 212
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPK----LCDFGLATWTSAPSVPFLCKTVK 231
V YLH+ + H D+KP NI+L + +PK + DFGLA + K +
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 178
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPK----LCDFGLATWTSAPSVPFLCKTVK 231
V YLH+ + H D+KP NI+L + +PK + DFGLA + K +
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 178
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 68 LGRGALSFVFKGKVGLLR---TSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 121
LG G+ V +G+ SVA+K L + E+ F RE+ SL H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L G + P + ++ + GSL L + + G+ L RY A+ +AE + YL
Sbjct: 80 LYGVVLTPP--MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRY--AVQVAEGMGYL 131
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT-VKGTFGYLAPE 240
+ + +HRD+ N+LL+++ + K+ DFGL ++ + K F + APE
Sbjct: 132 ES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ S +D + FGV L E+ T G++P
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 36/272 (13%)
Query: 88 VAIKRLDKE-DKESSKAFCRELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSL 145
VA+K L + + + +E+ I +L+H +I+ G C D E+ L L+ +YV GSL
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 146 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 205
+L G+ + A I E +AYLH + +HR++ N+LL + +
Sbjct: 106 RDYLPRHSIGL--------AQLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLLDNDR 154
Query: 206 IPKLCDFGLATWTSAPSVPFLCKTVKGT--FGYLAPEYFQHGKVSDKTDVYAFGVVLLEL 263
+ K+ DFGLA + + + F Y APE + K +DV++FGV L EL
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYEL 213
Query: 264 LT--------GRKPIEARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRNSXXXX 315
LT K +E + + VL +L RG E L P KC
Sbjct: 214 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG----ERLPRPD-KCPCE------ 262
Query: 316 XXXXXXXXCISSEESRRPGIEEIIAILRGEEE 347
C +E S RP E +I IL+ E
Sbjct: 263 -VYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 76
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 132
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIK-RLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 126
+G G V+K + T K RL+KED+ RE+ I L H NIV L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD-V 68
Query: 127 IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK-VALGIAESVAYLHNGT 185
I ++ L L+++++ L++ L + G+ SV K L + +AY H
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLE-------SVTAKSFLLQLLNGIAYCH--- 117
Query: 186 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHG 245
+R V+HRD+KP N+L++ + K+ DFGLA P + + V T Y AP+
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGS 175
Query: 246 -KVSDKTDVYAFGVVLLELLTG 266
K S D+++ G + E++ G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 77
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 133
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 188
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 189 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPK----LCDFGLATWTSAPSVPFLCKTVK 231
V YLH+ + H D+KP NI+L + +PK + DFGLA + K +
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 178
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 88
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 144
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 199
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 200 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 95
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 151
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 206
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 207 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 116/253 (45%), Gaps = 31/253 (12%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIAS 112
G+ + NF K +G G+ V V VA+K++D ++ + E++I
Sbjct: 25 GDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMR 81
Query: 113 SLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
H N+V + + ++ L+++ +++ GG+L + ++ + V L
Sbjct: 82 DYQHENVVEMYNSYLVGDE-LWVVMEFLEGGAL--------TDIVTHTRMNEEQIAAVCL 132
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKG 232
+ ++++ LH + V+HRDIK +ILL+ KL DFG S VP K + G
Sbjct: 133 AVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVP-RRKXLVG 187
Query: 233 TFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRG 292
T ++APE + D+++ G++++E++ G P + +P L +
Sbjct: 188 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPL-KA 233
Query: 293 MAAVEELLDPRLK 305
M + + L PRLK
Sbjct: 234 MKMIRDNLPPRLK 246
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 116/253 (45%), Gaps = 31/253 (12%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIAS 112
G+ + NF K +G G+ V V VA+K++D ++ + E++I
Sbjct: 20 GDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMR 76
Query: 113 SLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
H N+V + + ++ L+++ +++ GG+L + ++ + V L
Sbjct: 77 DYQHENVVEMYNSYLVGDE-LWVVMEFLEGGAL--------TDIVTHTRMNEEQIAAVCL 127
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKG 232
+ ++++ LH + V+HRDIK +ILL+ KL DFG S VP K + G
Sbjct: 128 AVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVP-RRKXLVG 182
Query: 233 TFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRG 292
T ++APE + D+++ G++++E++ G P + +P L +
Sbjct: 183 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPL-KA 228
Query: 293 MAAVEELLDPRLK 305
M + + L PRLK
Sbjct: 229 MKMIRDNLPPRLK 241
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 88
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 144
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 199
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 200 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V VG+ + +VA+K L D +++ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK 99
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 170
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 100 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 171 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA ++ +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA--RDINNIDYY 213
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KT G ++APE + ++DV++FGV++ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 110
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 166
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 221
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y APE F + DV++ G VL ELL G +PI
Sbjct: 222 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 256
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 84
Query: 121 PLVGFCIDP-----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F E L L+ YV H R TLP +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 140
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATW--TSAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 195
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 196 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIK-RLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 126
+G G V+K + T K RL+KED+ RE+ I L H NIV L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD-V 68
Query: 127 IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK-VALGIAESVAYLHNGT 185
I ++ L L+++++ L++ L + G+ SV K L + +AY H
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLE-------SVTAKSFLLQLLNGIAYCH--- 117
Query: 186 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHG 245
+R V+HRD+KP N+L++ + K+ DFGLA P + + V T Y AP+
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV--TLWYRAPDVLMGS 175
Query: 246 -KVSDKTDVYAFGVVLLELLTG 266
K S D+++ G + E++ G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPK----LCDFGLATWTSAPSVPFLCKTVK 231
V YLH+ + H D+KP NI+L + +PK + DFGLA + K +
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 178
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-GVRG----NSTLPWSVRYKV 170
H NI+ L+G C + L++I +Y S G+L +L ++ G+ N + +K
Sbjct: 100 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 171 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA ++
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA--RDINNIDXX 213
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KT G ++APE + ++DV++FGV++ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 38/239 (15%)
Query: 37 ERSISP--VANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD 94
+R I P + +L S+G++ ATH ++ +V AL F+ + LL+ S R++
Sbjct: 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKV----ALKFISRQ---LLKKSDMHMRVE 57
Query: 95 KEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK 154
RE+ L HP+I+ L P + ++ +Y +GG L ++ EKK+
Sbjct: 58 -----------REISYLKLLRHPHIIKLYDVITTP-TDIVMVIEY-AGGELFDYIVEKKR 104
Query: 155 GVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 214
+ I ++ Y H +VHRD+KP N+LL K+ DFGL
Sbjct: 105 MTEDEGR-------RFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGL 154
Query: 215 ATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV--SDKTDVYAFGVVLLELLTGRKPIE 271
+ + + KT G+ Y APE +GK+ + DV++ G+VL +L GR P +
Sbjct: 155 SNIMTDGN---FLKTSCGSPNYAAPEVI-NGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 116/253 (45%), Gaps = 31/253 (12%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIAS 112
G+ + NF K +G G+ V V VA+K++D ++ + E++I
Sbjct: 16 GDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMR 72
Query: 113 SLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
H N+V + + ++ L+++ +++ GG+L + ++ + V L
Sbjct: 73 DYQHENVVEMYNSYLVGDE-LWVVMEFLEGGAL--------TDIVTHTRMNEEQIAAVCL 123
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKG 232
+ ++++ LH + V+HRDIK +ILL+ KL DFG S VP K + G
Sbjct: 124 AVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVP-RRKXLVG 178
Query: 233 TFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRG 292
T ++APE + D+++ G++++E++ G P + +P L +
Sbjct: 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPL-KA 224
Query: 293 MAAVEELLDPRLK 305
M + + L PRLK
Sbjct: 225 MKMIRDNLPPRLK 237
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TWT LC
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-------LC 200
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 201 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 68 LGRGALSFVFKGKVGLLR---TSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 121
LG G+ V +G+ SVA+K L + E+ F RE+ SL H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L G + P + ++ + GSL L + + G+ L RY A+ +AE + YL
Sbjct: 80 LYGVVLTPP--MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRY--AVQVAEGMGYL 131
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT-VKGTFGYLAPE 240
+ + +HRD+ N+LL+++ + K+ DFGL ++ + K F + APE
Sbjct: 132 ES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ S +D + FGV L E+ T G++P
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 170
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 100 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 171 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA ++ +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA--RDINNIDYY 213
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
T G ++APE + ++DV++FGV++ E+ T
Sbjct: 214 KNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 31/253 (12%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIAS 112
G+ + NF K +G G+ V V VA+K++D ++ + E++I
Sbjct: 27 GDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMR 83
Query: 113 SLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
H N+V + + ++ L+++ +++ GG+L + + + V L
Sbjct: 84 DYQHENVVEMYNSYLVGDE-LWVVMEFLEGGALTDIVTHTRMNEEQIAA--------VCL 134
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKG 232
+ ++++ LH + V+HRDIK +ILL+ KL DFG S VP K + G
Sbjct: 135 AVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVP-RRKXLVG 189
Query: 233 TFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRG 292
T ++APE + D+++ G++++E++ G P + +P L +
Sbjct: 190 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPL-KA 235
Query: 293 MAAVEELLDPRLK 305
M + + L PRLK
Sbjct: 236 MKMIRDNLPPRLK 248
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 24/218 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC---RELMIASSLHHP 117
++ G LG G V G+ L VA+K L+++ S RE+ HP
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHL--HEKKKGVRGNSTLPWSVRYKVALGIA 175
+I+ L P F++ +YVSGG L ++ H + + + ++ I
Sbjct: 72 HIIKLYQVISTPTD-FFMVMEYVSGGELFDYICKHGRVEEMEAR---------RLFQQIL 121
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFG 235
+V Y H VVHRD+KP N+LL + K+ DFGL+ S FL + G+
Sbjct: 122 SAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRDSC-GSPN 175
Query: 236 YLAPEYFQHGKV--SDKTDVYAFGVVLLELLTGRKPIE 271
Y APE G++ + D+++ GV+L LL G P +
Sbjct: 176 YAAPEVIS-GRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 24 AHLDQFERIKTLGTGSF-----GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 78
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV GG + HL G + P + Y
Sbjct: 79 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY 132
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TWT
Sbjct: 133 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT---- 183
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAPE + D +A GV++ E+ G P A
Sbjct: 184 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 226
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPN 118
F LG GA S V + A+K + K+ KESS E+ + + H N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESS--IENEIAVLRKIKHEN 81
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
IV L P L+L+ + VSGG L + EK G +R + ++V
Sbjct: 82 IVALEDIYESPNH-LYLVMQLVSGGELFDRIVEK--GFYTEKDASTLIR-----QVLDAV 133
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPK---LCDFGLATWTSAPSVPFLCKTVKGTFG 235
YLH +VHRD+KP N+L S+ + DFGL+ V T GT G
Sbjct: 134 YYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV---MSTACGTPG 187
Query: 236 YLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y+APE S D ++ GV+ LL G P
Sbjct: 188 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSL---HHPN 118
F R+ G+G V GK SVAIK++ ++ + + REL I L HHPN
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRN----RELQIMQDLAVLHHPN 80
Query: 119 IVPLVG-FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL-GIAE 176
IV L F E+ IY V + LH + P + KV L +
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIR 140
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLS-SKKIPKLCDFGLAT--WTSAPSVPFLCKTVKGT 233
S+ LH + V HRDIKP N+L++ + KLCDFG A S P+V ++C
Sbjct: 141 SIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY--- 196
Query: 234 FGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y APE F + + D+++ G + E++ G +PI
Sbjct: 197 --YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPI 231
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 116/253 (45%), Gaps = 31/253 (12%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIAS 112
G+ + NF K +G G+ V V VA+K++D ++ + E++I
Sbjct: 70 GDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMR 126
Query: 113 SLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
H N+V + + ++ L+++ +++ GG+L + ++ + V L
Sbjct: 127 DYQHENVVEMYNSYLVGDE-LWVVMEFLEGGAL--------TDIVTHTRMNEEQIAAVCL 177
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKG 232
+ ++++ LH + V+HRDIK +ILL+ KL DFG S VP K + G
Sbjct: 178 AVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVP-RRKXLVG 232
Query: 233 TFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRG 292
T ++APE + D+++ G++++E++ G P + +P L +
Sbjct: 233 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPL-KA 278
Query: 293 MAAVEELLDPRLK 305
M + + L PRLK
Sbjct: 279 MKMIRDNLPPRLK 291
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 66 RVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVP 121
+V+G G V G + G VAIK L E + F E I HPN++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L G + + +I +++ GSL+ L + G T+ V + GIA + YL
Sbjct: 73 LEG-VVTKSTPVMIITEFMENGSLDSFLRQND----GQFTVIQLV--GMLRGIAAGMKYL 125
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW-TSAPSVPFLCKTVKGTFG--YLA 238
+ VHR + NIL++S + K+ DFGL+ + S P + G + A
Sbjct: 126 ---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
PE Q+ K + +DV+++G+V+ E+++ G +P
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 26/215 (12%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVP 121
++ +V+G G+ VF+ K+ + VAIK++ ++ + + REL I + HPN+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKL-VESDEVAIKKVLQDKRFKN----RELQIMRIVKHPNVVD 96
Query: 122 LVGFCI---DPEQGLFL--IYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
L F D + +FL + +YV H K T+P + +
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKL----KQTMPMLLIKLYMYQLLR 152
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWTSA--PSVPFLCKTVKGT 233
S+AY+H+ + HRDIKP N+LL + KL DFG A A P+V +C
Sbjct: 153 SLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY--- 206
Query: 234 FGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + D+++ G V+ EL+ G+
Sbjct: 207 --YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG G V VG+ + +VA+K L D +K+ S M+
Sbjct: 27 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 86
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYK- 169
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 87 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 170 ---VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+A + YL +++C+ HRD+ N+L++ + K+ DFGLA ++ +
Sbjct: 146 LVSCTYQLARGMEYL--ASQKCI-HRDLTARNVLVTENNVMKIADFGLA--RDINNIDYY 200
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KT G ++APE + ++DV++FGV++ E+ T
Sbjct: 201 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 68 LGRGALSFVFKGKVGLLR---TSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 121
LG G+ V +G+ SVA+K L + E+ F RE+ SL H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L G + P + ++ + GSL L + + G+ L RY A+ +AE + YL
Sbjct: 86 LYGVVLTPP--MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRY--AVQVAEGMGYL 137
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT-VKGTFGYLAPE 240
+ + +HRD+ N+LL+++ + K+ DFGL ++ + K F + APE
Sbjct: 138 ES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ S +D + FGV L E+ T G++P
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 68 LGRGALSFVFKGKVGLLR---TSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 121
LG G+ V +G+ SVA+K L + E+ F RE+ SL H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L G + P + ++ + GSL L + + G+ L RY A+ +AE + YL
Sbjct: 76 LYGVVLTPP--MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRY--AVQVAEGMGYL 127
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT-VKGTFGYLAPE 240
+ + +HRD+ N+LL+++ + K+ DFGL ++ + K F + APE
Sbjct: 128 ES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ S +D + FGV L E+ T G++P
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 68 LGRGALSFVFKGKVGLLR---TSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 121
LG G+ V +G+ SVA+K L + E+ F RE+ SL H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L G + P + ++ + GSL L + + G+ L RY A+ +AE + YL
Sbjct: 76 LYGVVLTPP--MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRY--AVQVAEGMGYL 127
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT-VKGTFGYLAPE 240
+ + +HRD+ N+LL+++ + K+ DFGL ++ + K F + APE
Sbjct: 128 ES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ S +D + FGV L E+ T G++P
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG GA V VG+ + +VA+K L D +K+ S M+
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYKV 170
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 100 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 171 ALG----IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+ +A + YL +++C+ HRD+ N+L++ + K+ DFGLA ++
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA--RDINNIDXX 213
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KT G ++APE + ++DV++FGV++ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG G V VG+ + +VA+K L D +K+ S M+
Sbjct: 32 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 91
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYK- 169
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 92 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 170 ---VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+A + YL +++C+ HRD+ N+L++ + K+ DFGLA ++ +
Sbjct: 151 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA--RDINNIDYY 205
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KT G ++APE + ++DV++FGV++ E+ T
Sbjct: 206 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRL---DKEDKESSKAFCRELMIASSLHHPNIVPLVG 124
LG G S+V + A+KR+ +++D+E ++ RE + +HPNI+ LV
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQ---READMHRLFNHPNILRLVA 93
Query: 125 FCIDPEQGL----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
+C+ E+G +L+ + G+L + K +GN + + + LGI +
Sbjct: 94 YCLR-ERGAKHEAWLLLPFFKRGTLWNEIERLKD--KGNFLTEDQILW-LLLGICRGLEA 149
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKG-------- 232
+H + HRD+KP+NILL + P L D G S+ C V+G
Sbjct: 150 IH---AKGYAHRDLKPTNILLGDEGQPVLMDLG--------SMNQACIHVEGSRQALTLQ 198
Query: 233 -------TFGYLAPEYF---QHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGE 278
T Y APE F H + ++TDV++ G VL ++ G P + +G+
Sbjct: 199 DWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG G V VG+ + +VA+K L D +K+ S M+
Sbjct: 29 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 88
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYK- 169
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 89 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 170 ---VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+A + YL +++C+ HRD+ N+L++ + K+ DFGLA ++ +
Sbjct: 148 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA--RDINNIDYY 202
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KT G ++APE + ++DV++FGV++ E+ T
Sbjct: 203 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +SS+ RE+ I +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
HPN++ L + + + LI + V+GG L L EK+ +T + I
Sbjct: 73 HPNVITLHE-VYENKTDVILIGELVAGGELFDFLAEKESLTEEEAT-------EFLKQIL 124
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIPK----LCDFGLATWTSAPSVPFLCKTVK 231
V YLH+ + H D+KP NI+L + +PK + DFGLA + K +
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 178
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 116/253 (45%), Gaps = 31/253 (12%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIAS 112
G+ + NF K +G G+ V V VA+K++D ++ + E++I
Sbjct: 147 GDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMR 203
Query: 113 SLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
H N+V + + ++ L+++ +++ GG+L + ++ + V L
Sbjct: 204 DYQHENVVEMYNSYLVGDE-LWVVMEFLEGGAL--------TDIVTHTRMNEEQIAAVCL 254
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKG 232
+ ++++ LH + V+HRDIK +ILL+ KL DFG S VP K + G
Sbjct: 255 AVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVP-RRKXLVG 309
Query: 233 TFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRG 292
T ++APE + D+++ G++++E++ G P + +P L +
Sbjct: 310 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPL-KA 355
Query: 293 MAAVEELLDPRLK 305
M + + L PRLK
Sbjct: 356 MKMIRDNLPPRLK 368
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 30/256 (11%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + + +G GA V +L +VA+K+L + +++ +K REL++ ++H NI
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 120 VPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
+ L+ ++ Q ++L+ + + +L + +H + R + L Y++ GI
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIHMELDHERMSYLL-----YQMLCGI 139
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
+LH+ ++HRD+KPSNI++ S K+ DFGLA F+ T
Sbjct: 140 K----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTACTNFMMTPYVVTR 189
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMA 294
Y APE + D+++ G ++ EL+ G QG +++ W K I G
Sbjct: 190 YYRAPEVILGMGYAANVDIWSVGCIMGELVKG-----CVIFQGTDHIDQWNKVIEQLGTP 244
Query: 295 AVEELLDPRLKCTSRN 310
+ E + L+ T RN
Sbjct: 245 SAEFM--AALQPTVRN 258
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+++ +V+G G+ V++ K+ VAIK++ ++ + + REL I L H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIV 76
Query: 121 PLVGFCIDPEQG-----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
L F + L L+ YV H R TLP +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYS----RAKQTLPVIYVKLYMYQLF 132
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWT--SAPSVPFLCKTVKG 232
S+AY+H+ + HRDIKP N+LL + KLCDFG A P+V +C
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 233 TFGYLAPEY-FQHGKVSDKTDVYAFGVVLLELLTGR 267
Y APE F + DV++ G VL ELL G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 65 GRVLGRGAL-SFVFKGKVGLLR------TSVAIKRL--DKEDKESSKAFCRELMIASSLH 115
G+ LG G V VG+ + +VA+K L D +K+ S M+
Sbjct: 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 145
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK-----GVRGNSTLPWSVRYK- 169
H NI+ L+G C + L++I +Y S G+L +L ++ N + +K
Sbjct: 146 HKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 170 ---VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
+A + YL +++C+ HRD+ N+L++ + K+ DFGLA ++ +
Sbjct: 205 LVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLA--RDINNIDYY 259
Query: 227 CKTVKGTF--GYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KT G ++APE + ++DV++FGV++ E+ T
Sbjct: 260 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + R LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +Y GG + HL G + P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVLEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + K+ DFG A TW LC
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-------LC 200
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 201 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 39 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 147
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 148 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 198
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAPE + D +A GV++ E+ G P A
Sbjct: 199 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 92/219 (42%), Gaps = 26/219 (11%)
Query: 60 HNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKE---DKESSKAFCRELMIA 111
++F ++LG+G GKV L+R A+K L KE K+ E +
Sbjct: 5 NDFDYLKLLGKGTF-----GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVA 171
+ HP + L + L + +Y +GG L HL ++ +
Sbjct: 60 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YG 111
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK 231
I ++ YLH+ R VV+RDIK N++L K+ DFGL S KT
Sbjct: 112 AEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFC 166
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT YLAPE + D + GVV+ E++ GR P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 41/232 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 197
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARR 274
LC GT YLAPE + D +A GV++ E+ G P A +
Sbjct: 198 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 25 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 79
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 80 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 133
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 134 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWX---- 184
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAPE + D +A GV++ E+ G P A
Sbjct: 185 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 227
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 92/219 (42%), Gaps = 26/219 (11%)
Query: 60 HNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKE---DKESSKAFCRELMIA 111
++F ++LG+G GKV L+R A+K L KE K+ E +
Sbjct: 5 NDFDYLKLLGKGTF-----GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVA 171
+ HP + L + L + +Y +GG L HL ++ +
Sbjct: 60 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YG 111
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK 231
I ++ YLH+ R VV+RDIK N++L K+ DFGL S KT
Sbjct: 112 AEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFC 166
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT YLAPE + D + GVV+ E++ GR P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 92/219 (42%), Gaps = 26/219 (11%)
Query: 60 HNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKE---DKESSKAFCRELMIA 111
++F ++LG+G GKV L+R A+K L KE K+ E +
Sbjct: 8 NDFDYLKLLGKGTF-----GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 62
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVA 171
+ HP + L + L + +Y +GG L HL ++ +
Sbjct: 63 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YG 114
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK 231
I ++ YLH+ R VV+RDIK N++L K+ DFGL S KT
Sbjct: 115 AEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFC 169
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT YLAPE + D + GVV+ E++ GR P
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVPL 122
V+G G V +G++ G + VAIK L E + F E I HPNI+ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
G + + ++ +++ G+L+ L G T+ V + GIA + YL
Sbjct: 81 EGVVTN-SMPVMILTEFMENGALDSFLRLND----GQFTVIQLV--GMLRGIASGMRYL- 132
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSV-PFLCKTVKGTFG--YLAP 239
E VHRD+ NIL++S + K+ DFGL+ + S P ++ G + AP
Sbjct: 133 --AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 240 EYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
E K + +D +++G+V+ E+++ G +P
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 197
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAPE + D +A GV++ E+ G P A
Sbjct: 198 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLD-KEDKESSKAFCRELMIASSLHHPNIV 120
F+K +G+G+ V+KG + VAIK +D +E ++ + +E+ + S P I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
G + + L++I +Y+ GGS L K G + + +R I + + Y
Sbjct: 81 RYFGSYLKSTK-LWIIMEYLGGGSA---LDLLKPGPLEETYIATILR-----EILKGLDY 131
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
LH +ER + HRDIK +N+LLS + KL DFG+A + + GT ++APE
Sbjct: 132 LH--SERKI-HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNXFVGTPFWMAPE 186
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
+ K D+++ G+ +EL G P
Sbjct: 187 VIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 17/212 (8%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC-----RELMIASSLHHPNIVP 121
V+G+GA S V + A+K +D SS RE I L HP+IV
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L+ + L+++++++ G L E K +V I E++ Y
Sbjct: 91 LLE-TYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
H+ ++HRD+KP N+LL+SK+ KL DFG+A + + GT ++A
Sbjct: 147 HDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL--VAGGRVGTPHFMA 201
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
PE + DV+ GV+L LL+G P
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 197
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAPE + D +A GV++ E+ G P A
Sbjct: 198 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 68 LGRGALSFVFKGKVGLLR---TSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 121
LG G+ V +G+ SVA+K L + E+ F RE+ SL H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L G + P + ++ + GSL L + + G+ L RY A+ +AE + YL
Sbjct: 86 LYGVVLTPP--MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRY--AVQVAEGMGYL 137
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKTVKGTFGYLAPE 240
+ + +HRD+ N+LL+++ + K+ DFGL + + K F + APE
Sbjct: 138 ES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ S +D + FGV L E+ T G++P
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 197
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAPE + D +A GV++ E+ G P A
Sbjct: 198 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 197
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAPE + D +A GV++ E+ G P A
Sbjct: 198 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKIL 79
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 136
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 137 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 190 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 136
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 137 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 190 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 68 LGRGALSFVFKGKVGLLR---TSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 121
LG G+ V +G+ SVA+K L + E+ F RE+ SL H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L G + P + ++ + GSL L + + G+ L RY A+ +AE + YL
Sbjct: 76 LYGVVLTPP--MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRY--AVQVAEGMGYL 127
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKTVKGTFGYLAPE 240
+ + +HRD+ N+LL+++ + K+ DFGL + + K F + APE
Sbjct: 128 ES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
+ S +D + FGV L E+ T G++P
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 28/258 (10%)
Query: 27 ELKWRKIQSLERS----ISPVANSLIRLSYGEILA-ATHNFSKGRVLGRGALSFVFKGKV 81
+++W+ I+S E + I P +L Y E +N G+ LG GA V +
Sbjct: 13 QVRWKIIESYEGNSYTFIDPT-----QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATA 67
Query: 82 -GLLRTS----VAIKRLDKEDKESSK-AFCRELMIASSL-HHPNIVPLVGFCIDPEQGLF 134
GL + VA+K L K A EL I S L H NIV L+G C +
Sbjct: 68 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP-VL 126
Query: 135 LIYKYVSGGSLERHLHEKKKGVR-------GNSTLPWSVRYKVALGIAESVAYLHNGTER 187
+I +Y G L L K + + NST + +A+ +A+L ++
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL--ASKN 184
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV 247
C+ HRD+ N+LL++ + K+ DFGLA S + + ++APE
Sbjct: 185 CI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 243
Query: 248 SDKTDVYAFGVVLLELLT 265
+ ++DV+++G++L E+ +
Sbjct: 244 TVQSDVWSYGILLWEIFS 261
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 22/187 (11%)
Query: 89 AIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL-ER 147
A+K +DK ++ ++ E+++ HPNI+ L D + ++++ + + GG L ++
Sbjct: 51 AVKIIDKSKRDPTEEI--EILLRYG-QHPNIITLKD-VYDDGKYVYVVTELMKGGELLDK 106
Query: 148 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILL----SS 203
L +K R S V I ++V YLH + VVHRD+KPSNIL +
Sbjct: 107 ILRQKFFSEREASA--------VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGN 155
Query: 204 KKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLEL 263
+ ++CDFG A A + L T T ++APE + D+++ GV+L +
Sbjct: 156 PESIRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTM 213
Query: 264 LTGRKPI 270
LTG P
Sbjct: 214 LTGYTPF 220
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 123
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 437 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 486
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT-VKGTFGYLAPEYF 242
E VHRD+ N+LL ++ K+ DFGL+ A + +T K + APE
Sbjct: 487 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 544
Query: 243 QHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEE 279
+ K S K+DV++FGV++ E + G+KP R ++G E
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY--RGMKGSE 580
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +S+ RE+ I +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
H N++ L + + LI + VSGG L L +K+ +T I
Sbjct: 74 HHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-------SFIKQIL 125
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLATWTSAPSVPFLCKTVK 231
+ V YLH + + H D+KP NI+L K IP KL DFGLA V F K +
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEF--KNIF 179
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 30/221 (13%)
Query: 60 HNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKE---DKESSKAFCRELMIA 111
++F ++LG+G GKV L+R A+K L KE K+ E +
Sbjct: 5 NDFDYLKLLGKGTF-----GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVA 171
+ HP + L + L + +Y +GG L HL ++ +
Sbjct: 60 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YG 111
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT--WTSAPSVPFLCKT 229
I ++ YLH+ R VV+RDIK N++L K+ DFGL + ++ C
Sbjct: 112 AEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC-- 166
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT YLAPE + D + GVV+ E++ GR P
Sbjct: 167 --GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELM----IASSLHHPNIVPLV 123
LG G V KG + + + +++ + A EL+ + L +P IV ++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 124 GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
G C + L+ + G L ++L + + V+ + + + ++V++G+ YL
Sbjct: 438 GIC--EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII--ELVHQVSMGMK----YLE- 487
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT-VKGTFGYLAPEYF 242
E VHRD+ N+LL ++ K+ DFGL+ A + +T K + APE
Sbjct: 488 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 545
Query: 243 QHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEE 279
+ K S K+DV++FGV++ E + G+KP R ++G E
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY--RGMKGSE 581
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +S+ RE+ I +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
H N++ L + + LI + VSGG L L +K+ +T I
Sbjct: 74 HHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-------SFIKQIL 125
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLATWTSAPSVPFLCKTVK 231
+ V YLH + + H D+KP NI+L K IP KL DFGLA V F K +
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEF--KNIF 179
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFAEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 197
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAPE + D +A GV++ E+ G P A
Sbjct: 198 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 107/269 (39%), Gaps = 27/269 (10%)
Query: 10 TVLMVNLENGLCDSRAQELKWRKIQSLERSISPVANS-----LIRLSYGEILAATHNFSK 64
T + + +GL A E+ +R S SP NS + L+ + + F
Sbjct: 100 TTAIQTVADGLKKQAAAEMDFR-------SGSPSDNSGAEEMEVSLAKPKHRVTMNEFEY 152
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 121
++LG+G V K A+K L KE K+ E + + HP +
Sbjct: 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 212
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L + L + +Y +GG L HL ++ + I ++ YL
Sbjct: 213 L-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVSALDYL 264
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEY 241
H +E+ VV+RD+K N++L K+ DFGL KT GT YLAPE
Sbjct: 265 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEV 320
Query: 242 FQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
+ D + GVV+ E++ GR P
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 30/221 (13%)
Query: 60 HNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKE---DKESSKAFCRELMIA 111
++F ++LG+G GKV L+R A+K L KE K+ E +
Sbjct: 10 NDFDYLKLLGKGTF-----GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 64
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVA 171
+ HP + L + L + +Y +GG L HL ++ +
Sbjct: 65 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YG 116
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT--WTSAPSVPFLCKT 229
I ++ YLH+ R VV+RDIK N++L K+ DFGL + ++ C
Sbjct: 117 AEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC-- 171
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT YLAPE + D + GVV+ E++ GR P
Sbjct: 172 --GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 122/254 (48%), Gaps = 23/254 (9%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKE-DKESSKAFCRELMIA-SSLHHPNIVPLVGF 125
LGRGA V K + +A+KR+ + + K +L I+ ++ P V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
+G I + SL++ K+ + T+P + K+A+ I +++ +LH +
Sbjct: 75 LF--REGDVWICMELMDTSLDKFY---KQVIDKGQTIPEDILGKIAVSIVKALEHLH--S 127
Query: 186 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK-GTFGYLAPEYF-- 242
+ V+HRD+KPSN+L+++ K+CDFG++ + V + K + G Y+APE
Sbjct: 128 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL----VDDVAKDIDAGCKPYMAPERINP 183
Query: 243 ---QHGKVSDKTDVYAFGVVLLELLTGRKPIEA--RRLQGEENLVLWAKPILHRGMAAVE 297
Q G S K+D+++ G+ ++EL R P ++ Q + +V P L +
Sbjct: 184 ELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSA- 241
Query: 298 ELLDPRLKCTSRNS 311
E +D +C +NS
Sbjct: 242 EFVDFTSQCLKKNS 255
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 27/222 (12%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCREL-MIASSLHHPNIVPLVGF 125
VLG GA + V + A+K ++K+ RE+ M+ H N++ L+ F
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
+ ++ +L+++ + GGS+ H+H++ R + L SV V +A ++ +LHN
Sbjct: 80 FEEEDR-FYLVFEKMRGGSILSHIHKR----RHFNELEASV---VVQDVASALDFLHN-- 129
Query: 186 ERCVVHRDIKPSNILLS--SKKIP-KLCDFGLATW------TSAPSVPFLCKTVKGTFGY 236
+ + HRD+KP NIL ++ P K+CDFGL + S S P L T G+ Y
Sbjct: 130 -KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELL-TPCGSAEY 187
Query: 237 LAPE----YFQHGKVSDK-TDVYAFGVVLLELLTGRKPIEAR 273
+APE + + + DK D+++ GV+L LL+G P R
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW A
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA-- 199
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ---------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +S+ RE+ I +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
H N++ L + + LI + VSGG L L +K+ +T I
Sbjct: 74 HHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-------SFIKQIL 125
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLATWTSAPSVPFLCKTVK 231
+ V YLH + + H D+KP NI+L K IP KL DFGLA V F K +
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEF--KNIF 179
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 33 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 87
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G P + Y
Sbjct: 88 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFY 141
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 142 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 192
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAPE + D +A GV++ E+ G P A
Sbjct: 193 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 235
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 197
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAPE + D +A GV++ E+ G P A
Sbjct: 198 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 118/248 (47%), Gaps = 22/248 (8%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 125
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN- 90
Query: 126 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 184
P++ L Y+ ++ +L + + + + + + Y++ +GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLVGIK----HLHSA 145
Query: 185 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQH 244
++HRD+KPSNI++ S K+ DFGLA T+ S F+ T Y APE
Sbjct: 146 ---GIIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTS--FMMTPYVVTRYYRAPEVILG 199
Query: 245 GKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMAAVEEL--LDP 302
+ D+++ G ++ E++ G G +++ W K I G + E + L P
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 303 RLKCTSRN 310
++ N
Sbjct: 255 TVRTYVEN 262
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV+GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 147 --AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 197
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAPE + D +A GV++ E+ G P A
Sbjct: 198 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 197
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAPE + D +A GV++ E+ G P A
Sbjct: 198 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
+ H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 134
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 135 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 188 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 30/211 (14%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPE 130
G V+K + A K +D + +E + + E+ I +S HPNIV L+ E
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD-AFYYE 79
Query: 131 QGLFLIYKYVSGGS-------LERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
L+++ ++ +GG+ LER L E + V TL +++ YLH+
Sbjct: 80 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-------------DALNYLHD 126
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+K NIL + KL DFG++ + + + GT ++APE
Sbjct: 127 NK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI-GTPYWMAPEVVM 182
Query: 244 HGKVSD-----KTDVYAFGVVLLELLTGRKP 269
D K DV++ G+ L+E+ P
Sbjct: 183 CETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 107/269 (39%), Gaps = 27/269 (10%)
Query: 10 TVLMVNLENGLCDSRAQELKWRKIQSLERSISPVANS-----LIRLSYGEILAATHNFSK 64
T + + +GL +E+ +R S SP NS + L+ + + F
Sbjct: 103 TTAIQTVADGLKKQEEEEMDFR-------SGSPSDNSGAEEMEVSLAKPKHRVTMNEFEY 155
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHHPNIVP 121
++LG+G V K A+K L KE K+ E + + HP +
Sbjct: 156 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 215
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L + L + +Y +GG L HL ++ + I ++ YL
Sbjct: 216 L-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVSALDYL 267
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEY 241
H +E+ VV+RD+K N++L K+ DFGL KT GT YLAPE
Sbjct: 268 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEV 323
Query: 242 FQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
+ D + GVV+ E++ GR P
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 67 VLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVPL 122
V+G G V +G++ G + VAIK L E + F E I HPNI+ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
G + + ++ +++ G+L+ L G T+ V + GIA + YL
Sbjct: 83 EGVVTN-SMPVMILTEFMENGALDSFLRLND----GQFTVIQLV--GMLRGIASGMRYL- 134
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW-TSAPSVPFLCKTVKGTFG--YLAP 239
E VHRD+ NIL++S + K+ DFGL+ + S P ++ G + AP
Sbjct: 135 --AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
Query: 240 EYFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
E K + +D +++G+V+ E+++ G +P
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +S+ RE+ I +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
H N++ L + + LI + VSGG L L +K+ +T I
Sbjct: 74 HHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-------SFIKQIL 125
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLATWTSAPSVPFLCKTVK 231
+ V YLH + + H D+KP NI+L K IP KL DFGLA V F K +
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEF--KNIF 179
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 39/231 (16%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+F + VLG+GA V K + L AIK++ + +E E+M+ +SL+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 121 --------------PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
P+ + + LF+ +Y +L +H + + +
Sbjct: 66 RYYAAWLERRNFVKPMT--AVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY----- 118
Query: 167 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA----------- 215
+++ I E+++Y+H+ + ++HRD+KP NI + + K+ DFGLA
Sbjct: 119 -WRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 216 -TWTSAPSVPFLCKTVKGTFGYLAPEYFQ-HGKVSDKTDVYAFGVVLLELL 264
+ P + GT Y+A E G ++K D+Y+ G++ E++
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 100/232 (43%), Gaps = 41/232 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 59 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G P + Y
Sbjct: 114 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFY 167
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 168 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 218
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARR 274
LC GT YLAPE + D +A GV++ E+ G P A +
Sbjct: 219 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 263
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 126
+GRG+ V R A K++ K E F +E+ I SL HPNI+ L
Sbjct: 33 TIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE-T 91
Query: 127 IDPEQGLFLIYKYVSGGSL-ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
+ ++L+ + +GG L ER +H K+ R + ++ + +VAY H
Sbjct: 92 FEDNTDIYLVMELCTGGELFERVVH--KRVFRESDAA------RIMKDVLSAVAYCHKLN 143
Query: 186 ERCVVHRDIKPSNILL--SSKKIP-KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
V HRD+KP N L S P KL DFGLA + +T GT Y++P+
Sbjct: 144 ---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQVL 197
Query: 243 QHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
+ G + D ++ GV++ LL G P A
Sbjct: 198 E-GLYGPECDEWSAGVMMYVLLCGYPPFSA 226
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 30/221 (13%)
Query: 60 HNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKE---DKESSKAFCRELMIA 111
++F ++LG+G GKV L+R A+K L KE K+ E +
Sbjct: 5 NDFDYLKLLGKGTF-----GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVA 171
+ HP + L + L + +Y +GG L HL ++ +
Sbjct: 60 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YG 111
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT--WTSAPSVPFLCKT 229
I ++ YLH+ R VV+RDIK N++L K+ DFGL + ++ C
Sbjct: 112 AEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC-- 166
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT YLAPE + D + GVV+ E++ GR P
Sbjct: 167 --GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 14 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 130
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 131 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 184 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+++ + ++ DFG A TW
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWX---- 197
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAPE + D +A GV++ E+ G P A
Sbjct: 198 ---LC----GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 14 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 130
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 131 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 184 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 200
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 201 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + +G G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + K+ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 21 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 137
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 138 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 191 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 200
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 201 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 22 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 81
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 82 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 138
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 139 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 192 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 13 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 72
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 73 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 129
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 130 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 183 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 136
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 137 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 190 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 31 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 91 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 142
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 143 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 192
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 193 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 233
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK------AFCRELMIASSLH 115
+ G LG G + V K + A K + K +S+ RE+ I +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 116 HPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA 175
H N++ L + + LI + VSGG L L +K+ +T I
Sbjct: 74 HHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-------SFIKQIL 125
Query: 176 ESVAYLHNGTERCVVHRDIKPSNILLSSKKIP----KLCDFGLATWTSAPSVPFLCKTVK 231
+ V YLH + + H D+KP NI+L K IP KL DFGLA V F K +
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEF--KNIF 179
Query: 232 GTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT ++APE + + + D+++ GV+ LL+G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 197
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAPE + D +A GV++ ++ G P A
Sbjct: 198 ---LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFA 240
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 104/237 (43%), Gaps = 36/237 (15%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVG-- 124
V RG V+K + LL VA+K +DK+S + E+ + H NI+ +G
Sbjct: 31 VKARGRFGCVWKAQ--LLNEYVAVKIFPIQDKQSWQNE-YEVYSLPGMKHENILQFIGAE 87
Query: 125 ---FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
+D + L+LI + GSL L + + W+ +A +A +AYL
Sbjct: 88 KRGTSVDVD--LWLITAFHEKGSLSDFLKA--------NVVSWNELCHIAETMARGLAYL 137
Query: 182 H-------NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
H +G + + HRDIK N+LL + + DFGLA A GT
Sbjct: 138 HEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTR 197
Query: 235 GYLAPEYFQHGKVSD------KTDVYAFGVVLLELLT----GRKPIEARRLQGEENL 281
Y+APE + G ++ + D+YA G+VL EL + P++ L EE +
Sbjct: 198 RYMAPEVLE-GAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 200
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 201 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 59 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 119 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 170
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 171 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 220
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 221 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFC 126
+GRG+ V R A K++ K E F +E+ I SL HPNI+ L
Sbjct: 16 TIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE-T 74
Query: 127 IDPEQGLFLIYKYVSGGSL-ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
+ ++L+ + +GG L ER +H K+ R + ++ + +VAY H
Sbjct: 75 FEDNTDIYLVMELCTGGELFERVVH--KRVFRESDAA------RIMKDVLSAVAYCHKLN 126
Query: 186 ERCVVHRDIKPSNILL--SSKKIP-KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYF 242
V HRD+KP N L S P KL DFGLA + +T GT Y++P+
Sbjct: 127 ---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQVL 180
Query: 243 QHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
+ G + D ++ GV++ LL G P A
Sbjct: 181 E-GLYGPECDEWSAGVMMYVLLCGYPPFSA 209
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSK-----AFCRELMIASSLHH 116
+ K LG G + V+K + VAIK++ + +K RE+ + L H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGV--RGNSTL--PWSVRYKVAL 172
PNI+ GL + + S SL E V + NS + P ++ + +
Sbjct: 72 PNII-----------GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 173 GIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKG 232
+ + + YLH + ++HRD+KP+N+LL + KL DFGLA +P+ + + V
Sbjct: 121 TL-QGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-- 174
Query: 233 TFGYLAPEYFQHGKVSD-KTDVYAFGVVLLELL 264
T Y APE ++ D++A G +L ELL
Sbjct: 175 TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 30/221 (13%)
Query: 60 HNFSKGRVLGRGALSFVFKGKVGLLRTSV-----AIKRLDKE---DKESSKAFCRELMIA 111
++F ++LG+G GKV L+R A+K L KE K+ E +
Sbjct: 5 NDFDYLKLLGKGTF-----GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVA 171
+ HP + L + L + +Y +GG L HL ++ +
Sbjct: 60 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YG 111
Query: 172 LGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT--WTSAPSVPFLCKT 229
I ++ YLH+ R VV+RDIK N++L K+ DFGL + ++ C
Sbjct: 112 AEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC-- 166
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
GT YLAPE + D + GVV+ E++ GR P
Sbjct: 167 --GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 136
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 137 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 190 EXV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 61 NFSKGRVLGRG-------ALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIA 111
N G+ LG G A +F KG+ G T+VA+K L KE+ S + E +
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGY--TTVAVKML-KENASPSELRDLLSEFNVL 80
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRG------------- 158
++HP+++ L G C + L LI +Y GSL L E +K G
Sbjct: 81 KQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 159 ----NSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 214
L A I++ + YL E +VHRD+ NIL++ + K+ DFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 215 ATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
+ + ++A E + ++DV++FGV+L E++T
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 21 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 137
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 138 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 191 EXV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 115/250 (46%), Gaps = 16/250 (6%)
Query: 27 ELKWRKIQSLERSISPVANSLIRLSYGEILA-ATHNFSKGRVLGRGALSFVFKGKV-GLL 84
+++W+ I+S E + + +L Y E +N G+ LG GA V + GL
Sbjct: 13 QVRWKIIESYEGNSYTFIDP-TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLG 71
Query: 85 RTS----VAIKRLDKEDKESSK-AFCRELMIASSL-HHPNIVPLVGFCIDPEQGLFLIYK 138
+ VA+K L K A EL I S L H NIV L+G C + +I +
Sbjct: 72 KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP-VLVITE 130
Query: 139 YVSGGSLERHLHEKKKG-VRGNSTLPWSVR--YKVALGIAESVAYLHNGTERCVVHRDIK 195
Y G L L K + + P +R + +A+ +A+L ++ C+ HRD+
Sbjct: 131 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCI-HRDVA 187
Query: 196 PSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYA 255
N+LL++ + K+ DFGLA S + + ++APE + ++DV++
Sbjct: 188 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 247
Query: 256 FGVVLLELLT 265
+G++L E+ +
Sbjct: 248 YGILLWEIFS 257
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW----- 196
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
+ GT YLAPE + D +A GV++ E+ G P A
Sbjct: 197 ------XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 115/250 (46%), Gaps = 16/250 (6%)
Query: 27 ELKWRKIQSLERSISPVANSLIRLSYGEILA-ATHNFSKGRVLGRGALSFVFKGKV-GLL 84
+++W+ I+S E + + +L Y E +N G+ LG GA V + GL
Sbjct: 5 QVRWKIIESYEGNSYTFIDP-TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLG 63
Query: 85 RTS----VAIKRLDKEDKESSK-AFCRELMIASSL-HHPNIVPLVGFCIDPEQGLFLIYK 138
+ VA+K L K A EL I S L H NIV L+G C + +I +
Sbjct: 64 KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP-VLVITE 122
Query: 139 YVSGGSLERHLHEKKKG-VRGNSTLPWSVRYKVALG--IAESVAYLHNGTERCVVHRDIK 195
Y G L L K + + P +R + +A+ +A+L ++ C+ HRD+
Sbjct: 123 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCI-HRDVA 179
Query: 196 PSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYA 255
N+LL++ + K+ DFGLA S + + ++APE + ++DV++
Sbjct: 180 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 239
Query: 256 FGVVLLELLT 265
+G++L E+ +
Sbjct: 240 YGILLWEIFS 249
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 200
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 201 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 18/220 (8%)
Query: 55 ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSL 114
I+ + + + +G G + L + VA+K +++ + RE++ SL
Sbjct: 15 IMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIER-GAAIDENVQREIINHRSL 73
Query: 115 HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
HPNIV + P L +I +Y SGG L + + + + +
Sbjct: 74 RHPNIVRFKEVILTPTH-LAIIMEYASGGELYERICNAGRFSEDEARFFFQ-------QL 125
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIP--KLCDFGLATWTSAPSVPFLCKTVKG 232
V+Y H+ + HRD+K N LL P K+CDFG + + S P K+ G
Sbjct: 126 LSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVG 179
Query: 233 TFGYLAPEYFQHGKVSDK-TDVYAFGVVLLELLTGRKPIE 271
T Y+APE + K DV++ GV L +L G P E
Sbjct: 180 TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V L + VAIK++ E + + RE+ I
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQ 136
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 137 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 190 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 26/256 (10%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + +G GA V +L +VAIK+L + +++ +K REL++ ++H NI
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 120 VPLVGFCIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ L+ P++ L Y+ ++ +L + + + + + + Y++ GI
Sbjct: 88 IGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK--- 142
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA--TWTSAPSVPFLCKTVKGTFGY 236
+LH+ ++HRD+KPSNI++ S K+ DFGLA TS VPF+ T Y
Sbjct: 143 -HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV-----TRYY 193
Query: 237 LAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMAAV 296
APE + D+++ G ++ E++ G G +++ W K I G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQWNKVIEQLGTPCP 248
Query: 297 EEL--LDPRLKCTSRN 310
E + L P ++ N
Sbjct: 249 EFMKKLQPTVRTYVEN 264
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +Y GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+++ + K+ DFGLA TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 22/187 (11%)
Query: 89 AIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL-ER 147
A+K +DK ++ S+ E+++ HPNI+ L D + ++L+ + + GG L ++
Sbjct: 56 AVKVIDKSKRDPSEEI--EILLRYG-QHPNIITLKD-VYDDGKHVYLVTELMRGGELLDK 111
Query: 148 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILL----SS 203
L +K R S V I ++V YLH+ + VVHRD+KPSNIL +
Sbjct: 112 ILRQKFFSEREASF--------VLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGN 160
Query: 204 KKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLEL 263
+ ++CDFG A A + L T T ++APE + + D+++ G++L +
Sbjct: 161 PECLRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTM 218
Query: 264 LTGRKPI 270
L G P
Sbjct: 219 LAGYTPF 225
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARR 274
GT YLAPE + D +A GV++ E+ G P A +
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 22/187 (11%)
Query: 89 AIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL-ER 147
A+K +DK ++ S+ E+++ HPNI+ L D + ++L+ + + GG L ++
Sbjct: 56 AVKVIDKSKRDPSEEI--EILLRYG-QHPNIITLKD-VYDDGKHVYLVTELMRGGELLDK 111
Query: 148 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILL----SS 203
L +K R S V I ++V YLH+ + VVHRD+KPSNIL +
Sbjct: 112 ILRQKFFSEREASF--------VLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGN 160
Query: 204 KKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLEL 263
+ ++CDFG A A + L T T ++APE + + D+++ G++L +
Sbjct: 161 PECLRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTM 218
Query: 264 LTGRKPI 270
L G P
Sbjct: 219 LAGYTPF 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 132
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 133 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 186 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG GA V+K K A K ++ + +E + + E+ I ++ HP IV L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
+ L+++ ++ GG+++ + E +G+ V + E++ +LH+ +
Sbjct: 87 H-DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI------QVVCRQMLEALNFLHS---K 136
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK--TVKGTFGYLAPEYFQHG 245
++HRD+K N+L++ + +L DFG+ SA ++ L K + GT ++APE
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGV----SAKNLKTLQKRDSFIGTPYWMAPEVVMCE 192
Query: 246 KVSD-----KTDVYAFGVVLLELLTGRKP 269
+ D K D+++ G+ L+E+ P
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 35/223 (15%)
Query: 67 VLGRGALSFVFKGKVGLLR-TSVAIKRLDKEDKESSKAFCREL-MIASSLHHPNIVPLVG 124
+LG GA + V +G V L A+K ++K+ S RE+ + + NI+ L+
Sbjct: 20 LLGEGAYAKV-QGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 125 FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 184
F D + +L+++ + GGS+ H+ ++K ++ +V +A ++ +LH
Sbjct: 79 FFEDDTR-FYLVFEKLQGGSILAHIQKQKHFNEREAS-------RVVRDVAAALDFLHT- 129
Query: 185 TERCVVHRDIKPSNILLSS--KKIP-KLCDFGLA---------TWTSAPSVPFLCKTVKG 232
+ + HRD+KP NIL S K P K+CDF L T + P + C G
Sbjct: 130 --KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC----G 183
Query: 233 TFGYLAPE----YFQHGKVSDK-TDVYAFGVVLLELLTGRKPI 270
+ Y+APE + DK D+++ GVVL +L+G P
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 16/210 (7%)
Query: 66 RVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVP 121
+++G G V G++ G VAIK L E + F E I HPNI+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L G + ++ +Y+ GSL+ L G T+ V + G+ + YL
Sbjct: 115 LEGVVTRGRLAM-IVTEYMENGSLDTFLRTHD----GQFTIMQLV--GMLRGVGAGMRYL 167
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKTVKGTFGYLAPE 240
++ VHRD+ N+L+ S + K+ DFGL+ P + K + APE
Sbjct: 168 ---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPE 224
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
S +DV++FGVV+ E+L G +P
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 31 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G P + Y A
Sbjct: 91 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFXEPHARFY--AAQ 142
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 143 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 192
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 193 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 233
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG GA V+K K A K ++ + +E + + E+ I ++ HP IV L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
+ L+++ ++ GG+++ + E +G+ V + E++ +LH+ +
Sbjct: 79 H-DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI------QVVCRQMLEALNFLHS---K 128
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK--TVKGTFGYLAPEYFQHG 245
++HRD+K N+L++ + +L DFG+ SA ++ L K + GT ++APE
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGV----SAKNLKTLQKRDSFIGTPYWMAPEVVMCE 184
Query: 246 KVSD-----KTDVYAFGVVLLELLTGRKP 269
+ D K D+++ G+ L+E+ P
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
+ H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 134
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 135 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 188 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 21/239 (8%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 36 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 112 SSLHHPNIVPLVGF----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR 167
H NI+ + I+ + ++L+ ++ G L + L K N + + +
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYLV-THLMGADLYKLL---KTQHLSNDHICYFL- 150
Query: 168 YKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPF 225
Y++ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA F
Sbjct: 151 YQILRGLK----YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 203
Query: 226 LCKTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
L + V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 204 LTEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 88 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 147
VA+K +++ +K ++ RE++ SL HPNIV + P L ++ +Y SGG L
Sbjct: 47 VAVKYIERGEKIAANV-KREIINHRSLRHPNIVRFKEVILTPTH-LAIVMEYASGGELFE 104
Query: 148 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP 207
+ + + + + V+Y H V HRD+K N LL P
Sbjct: 105 RICNAGRFSEDEARFFFQ-------QLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAP 154
Query: 208 --KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELL 264
K+CDFG + + S P K+ GT Y+APE + K DV++ GV L +L
Sbjct: 155 RLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 265 TGRKPIE 271
G P E
Sbjct: 212 VGAYPFE 218
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 19/238 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 132
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS---VPFL 226
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA + P FL
Sbjct: 133 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFL 184
Query: 227 CKTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 185 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 22/248 (8%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 125
+G GA V +L +VAIK+L + +++ +K REL++ ++H NI+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN- 90
Query: 126 CIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 184
P++ L Y+ ++ +L + + + + + + Y++ GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLCGIK----HLHSA 145
Query: 185 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQH 244
++HRD+KPSNI++ S K+ DFGLA T+ S F+ T Y APE
Sbjct: 146 ---GIIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTS--FMMTPYVVTRYYRAPEVILG 199
Query: 245 GKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMAAVEEL--LDP 302
+ D+++ G ++ E++ G G +++ W K I G + E + L P
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 303 RLKCTSRN 310
++ N
Sbjct: 255 TVRTYVEN 262
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 22/254 (8%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + +G GA V +L +VAIK+L + +++ +K REL++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 120 VPLVGFCIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ L+ P++ L Y+ ++ +L + + + + + + Y++ GI
Sbjct: 86 IGLLN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLCGIK--- 140
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+LH+ ++HRD+KPSNI++ S K+ DFGLA T+ S F+ T Y A
Sbjct: 141 -HLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTS--FMMTPYVVTRYYRA 193
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMAAVEE 298
PE + D+++ G ++ E++ G G +++ W K I G + E
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQWNKVIEQLGTPSPEF 248
Query: 299 L--LDPRLKCTSRN 310
+ L P ++ N
Sbjct: 249 MKKLQPTVRTYVEN 262
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 61 NFSKGRVLGRG-------ALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIA 111
N G+ LG G A +F KG+ G T+VA+K L KE+ S + E +
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGY--TTVAVKML-KENASPSELRDLLSEFNVL 80
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRG------------- 158
++HP+++ L G C + L LI +Y GSL L E +K G
Sbjct: 81 KQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 159 ----NSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 214
L A I++ + YL E +VHRD+ NIL++ + K+ DFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 215 ATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
+ + ++A E + ++DV++FGV+L E++T
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + +G G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +Y+ GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + K+ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFXEPHARFY--AAQ 150
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 200
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 201 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFXEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + +G G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +Y+ GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + K+ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V L + VAI+++ E + + RE+ I
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKIL 79
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 136
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 137 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 190 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +Y GG + HL G + P + Y A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+++ + K+ DFG A TW LC
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-------LC 200
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 201 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 88 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 147
VA+K +++ +K + RE++ SL HPNIV + P L ++ +Y SGG L
Sbjct: 46 VAVKYIERGEK-IDENVKREIINHRSLRHPNIVRFKEVILTPTH-LAIVMEYASGGELFE 103
Query: 148 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP 207
+ + + + + V+Y H V HRD+K N LL P
Sbjct: 104 RICNAGRFSEDEARFFFQ-------QLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAP 153
Query: 208 --KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELL 264
K+CDFG + + S P K+ GT Y+APE + K DV++ GV L +L
Sbjct: 154 RLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 210
Query: 265 TGRKPIE 271
G P E
Sbjct: 211 VGAYPFE 217
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +YV GG + HL G P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFXEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 24 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 83
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 84 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 140
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 141 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 194 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 249
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 132
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 133 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 186 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 197
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT YLAP + D +A GV++ E+ G P A
Sbjct: 198 ---LC----GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 51/240 (21%)
Query: 61 NFSKGRVLGRG-------ALSFVFKGKVGLLRTSVAIKRLDKEDKESS--KAFCRELMIA 111
N G+ LG G A +F KG+ G T+VA+K L KE+ S + E +
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGY--TTVAVKML-KENASPSELRDLLSEFNVL 80
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRG------------- 158
++HP+++ L G C + L LI +Y GSL L E +K G
Sbjct: 81 KQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 159 ----NSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 214
L A I++ + YL E +VHRD+ NIL++ + K+ DFGL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 215 A---------TWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
+ S +P ++ F ++ + ++DV++FGV+L E++T
Sbjct: 197 SRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI---------YTTQSDVWSFGVLLWEIVT 247
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L + L+++ +YV GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L + L+++ +YV GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 98 KESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVR 157
K F EL I + + + + G + ++ +++IY+Y+ S+ + E +
Sbjct: 84 KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDE-VYIIYEYMENDSILK-FDEYFFVLD 141
Query: 158 GNST--LPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 215
N T +P V + + S +Y+HN E+ + HRD+KPSNIL+ KL DFG +
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 216 TWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSD--KTDVYAFGVVLLELLTGRKPIEAR 273
+ + K +GT+ ++ PE+F + + K D+++ G+ L + P +
Sbjct: 200 EYMVDKKI----KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 19/238 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 132
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS---VPFL 226
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA + P FL
Sbjct: 133 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 184
Query: 227 CKTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 185 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 78 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 134
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 135 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 188 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L + L+++ +YV GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+L+ + ++ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 111/254 (43%), Gaps = 37/254 (14%)
Query: 106 RELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPW 164
RE+ I +L+H +IV G C D E+ + L+ +YV GSL +L G+
Sbjct: 60 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL-------- 111
Query: 165 SVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVP 224
+ A I E +AYLH + +HR + N+LL + ++ K+ DFGLA
Sbjct: 112 AQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 168
Query: 225 FLCKTVKGT--FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENL- 281
+ + + F Y APE + K +DV++FGV L ELLT ++ + E +
Sbjct: 169 YRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIG 227
Query: 282 -------VLWAKPILHRGMAAVEELLDP-RLKCTSRNSXXXXXXXXXXXXCISSEESRRP 333
VL +L RG E L P R C + C +E S RP
Sbjct: 228 HTQGQMTVLRLTELLERG----ERLPRPDRCPCEIYH---------LMKNCWETEASFRP 274
Query: 334 GIEEIIAILRGEEE 347
+ ++ IL+ +E
Sbjct: 275 TFQNLVPILQTAQE 288
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
E+ I + LHHP ++ L + + + LI +++SGG L + + + + +
Sbjct: 98 EISIMNQLHHPKLINLHD-AFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR 156
Query: 167 RYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP--KLCDFGLATWTSAPSVP 224
+ E + ++H E +VH DIKP NI+ +KK K+ DFGLAT + +
Sbjct: 157 Q------ACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI- 206
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENL 281
K T + APE V TD++A GV+ LL+G P GE++L
Sbjct: 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP-----FAGEDDL 256
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 111/254 (43%), Gaps = 37/254 (14%)
Query: 106 RELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPW 164
RE+ I +L+H +IV G C D E+ + L+ +YV GSL +L G+
Sbjct: 59 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL-------- 110
Query: 165 SVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVP 224
+ A I E +AYLH + +HR + N+LL + ++ K+ DFGLA
Sbjct: 111 AQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 167
Query: 225 FLCKTVKGT--FGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENL- 281
+ + + F Y APE + K +DV++FGV L ELLT ++ + E +
Sbjct: 168 YRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIG 226
Query: 282 -------VLWAKPILHRGMAAVEELLDP-RLKCTSRNSXXXXXXXXXXXXCISSEESRRP 333
VL +L RG E L P R C + C +E S RP
Sbjct: 227 HTQGQMTVLRLTELLERG----ERLPRPDRCPCEIYH---------LMKNCWETEASFRP 273
Query: 334 GIEEIIAILRGEEE 347
+ ++ IL+ +E
Sbjct: 274 TFQNLVPILQTAQE 287
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +Y GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+++ + K+ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 22/187 (11%)
Query: 89 AIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL-ER 147
A+K +DK ++ ++ E+++ HPNI+ L D + ++++ + GG L ++
Sbjct: 51 AVKIIDKSKRDPTEEI--EILLRYG-QHPNIITLKD-VYDDGKYVYVVTELXKGGELLDK 106
Query: 148 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILL----SS 203
L +K R S V I ++V YLH + VVHRD+KPSNIL +
Sbjct: 107 ILRQKFFSEREASA--------VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGN 155
Query: 204 KKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLEL 263
+ ++CDFG A A + L T T ++APE + D+++ GV+L
Sbjct: 156 PESIRICDFGFAKQLRAEN--GLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTX 213
Query: 264 LTGRKPI 270
LTG P
Sbjct: 214 LTGYTPF 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +Y GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+++ + ++ DFGLA TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 36 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 152
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSA--PSVPFLC 227
+ G+ Y+H+ V+HRD+KPSN+LL++ K+CDFGLA FL
Sbjct: 153 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 206 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 39 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 95
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 96 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 150
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQ 120
Query: 151 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 210
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 121 MELDHERMSYLL-----YQMLXGIK----HLHSA---GIIHRDLKPSNIVVKSDXTLKIL 168
Query: 211 DFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
DFGLA T+ S F+ T Y APE + D+++ G ++ E++ +
Sbjct: 169 DFGLAR-TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI-- 223
Query: 271 EARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRN 310
G + + W K I G E + +L+ T RN
Sbjct: 224 ---LFPGRDYIDQWNKVIEQLGTPCPEFM--KKLQPTVRN 258
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 22/254 (8%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + +G GA V +L +VAIK+L + +++ +K REL++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 120 VPLVGFCIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ L+ P++ L Y+ ++ +L + + + + + + Y++ GI
Sbjct: 86 IGLLN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLCGIK--- 140
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+LH+ ++HRD+KPSNI++ S K+ DFGLA T+ S F+ T Y A
Sbjct: 141 -HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTS--FMMTPYVVTRYYRA 193
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMAAVEE 298
PE + D+++ G ++ E++ G G +++ W K I G + E
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQWNKVIEQLGTPSPEF 248
Query: 299 L--LDPRLKCTSRN 310
+ L P ++ N
Sbjct: 249 MKKLQPTVRTYVEN 262
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 92/219 (42%), Gaps = 11/219 (5%)
Query: 64 KGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLV 123
+G +GRG V+K K + E S + CRE+ + L HPN++ L
Sbjct: 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQ 84
Query: 124 G-FCIDPEQGLFLIYKYVSGGSLE-RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
F ++ ++L++ Y H K + LP + + I + + YL
Sbjct: 85 KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 144
Query: 182 HNGTERCVVHRDIKPSNILL----SSKKIPKLCDFGLATWTSAPSVPFL-CKTVKGTFGY 236
H V+HRD+KP+NIL+ + K+ D G A ++P P V TF Y
Sbjct: 145 HAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 201
Query: 237 LAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARR 274
APE + K D++A G + ELLT R+
Sbjct: 202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 28/223 (12%)
Query: 65 GRVLGRGALSFVFKGKVGLLRTSVAIKRLD--KEDKESSKAFCRELMIASSLHHPNIVPL 122
G ++G+G V+ G+ VAI+ +D +++++ KAF RE+M H N+V
Sbjct: 38 GELIGKGRFGQVYHGR---WHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94
Query: 123 VGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+G C+ P L +I G +L + + K + N T ++A I + + YLH
Sbjct: 95 MGACMSPPH-LAIITSLCKGRTLYSVVRDAKIVLDVNKT------RQIAQEIVKGMGYLH 147
Query: 183 NGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT---SAPSVPFLCKTVKGTFGYLAP 239
+ ++H+D+K N+ + K+ + DFGL + + A + G +LAP
Sbjct: 148 ---AKGILHKDLKSKNVFYDNGKV-VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAP 203
Query: 240 EYFQHGK---------VSDKTDVYAFGVVLLELLTGRKPIEAR 273
E + S +DV+A G + EL P + +
Sbjct: 204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ 246
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 18/215 (8%)
Query: 60 HNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKR--LDKEDKESSKAFCRELMIASSLHHP 117
+ K +G G VFK K VA+KR LD +D+ + RE+ + L H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
NIV L + ++ L L++++ KK N L + + +
Sbjct: 62 NIVRLHD-VLHSDKKLTLVFEFCDQDL-------KKYFDSCNGDLDPEIVKSFLFQLLKG 113
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK-GTFGY 236
+ + H+ R V+HRD+KP N+L++ KL DFGLA A +P C + + T Y
Sbjct: 114 LGFCHS---RNVLHRDLKPQNLLINRNGELKLADFGLA---RAFGIPVRCYSAEVVTLWY 167
Query: 237 LAPEYFQHGKV-SDKTDVYAFGVVLLELLTGRKPI 270
P+ K+ S D+++ G + EL +P+
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 64/278 (23%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 25 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 84
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKK--------KGVRGNS------TLP 163
N+V L+G C P L +I ++ G+L +L K+ KG R +P
Sbjct: 85 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIP 144
Query: 164 WSVR-----------------------------------YKVALGIAESVAY---LHNGT 185
++ YK L + + Y + G
Sbjct: 145 VDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGM 204
Query: 186 E----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEY 241
E R +HRD+ NILLS K + K+CDFGLA + ++APE
Sbjct: 205 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET 264
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++DV++FGV+L E+ + G P ++ E
Sbjct: 265 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 302
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 64/278 (23%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKK--------KGVRGNS------TLP 163
N+V L+G C P L +I ++ G+L +L K+ KG R +P
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIP 151
Query: 164 WSVR-----------------------------------YKVALGIAESVAY---LHNGT 185
++ YK L + + Y + G
Sbjct: 152 VDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGM 211
Query: 186 E----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEY 241
E R +HRD+ NILLS K + K+CDFGLA + ++APE
Sbjct: 212 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET 271
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++DV++FGV+L E+ + G P ++ E
Sbjct: 272 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 309
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 39 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 95
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 96 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 150
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQ 120
Query: 151 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 210
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 121 MELDHERMSYLL-----YQMLXGIK----HLHSA---GIIHRDLKPSNIVVKSDXTLKIL 168
Query: 211 DFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
DFGLA T+ S F+ T Y APE + D+++ G ++ E++ +
Sbjct: 169 DFGLAR-TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI-- 223
Query: 271 EARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRN 310
G + + W K I G E + +L+ T RN
Sbjct: 224 ---LFPGRDYIDQWNKVIEQLGTPCPEFM--KKLQPTVRN 258
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKA----FCRELMIASSLHHPNIVPLV 123
+GRG+ V+KG T+V + + +D++ +K+ F E L HPNIV
Sbjct: 34 IGRGSFKTVYKGLD--TETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 124 GF---CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
+ ++ + L+ + + G+L+ +L ++ K + W + I + + +
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYL-KRFKVXKIKVLRSWCRQ------ILKGLQF 144
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIP-KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAP 239
LH T ++HRD+K NI ++ K+ D GLAT A K V GT + AP
Sbjct: 145 LHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS----FAKAVIGTPEFXAP 199
Query: 240 EYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
E ++ K + DVYAFG LE T P
Sbjct: 200 EXYEE-KYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 64/278 (23%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 86
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKK--------KGVRGNS------TLP 163
N+V L+G C P L +I ++ G+L +L K+ KG R +P
Sbjct: 87 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIP 146
Query: 164 WSVR-----------------------------------YKVALGIAESVAY---LHNGT 185
++ YK L + + Y + G
Sbjct: 147 VDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGM 206
Query: 186 E----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEY 241
E R +HRD+ NILLS K + K+CDFGLA + ++APE
Sbjct: 207 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET 266
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++DV++FGV+L E+ + G P ++ E
Sbjct: 267 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 304
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 39 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 95
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 96 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 150
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQ 120
Query: 151 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 210
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 121 MELDHERMSYLL-----YQMLCGIK----HLHSA---GIIHRDLKPSNIVVKSDXTLKIL 168
Query: 211 DFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
DFGLA T+ S F+ T Y APE + D+++ G ++ E++ +
Sbjct: 169 DFGLAR-TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI-- 223
Query: 271 EARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRN 310
G + + W K I G E + +L+ T RN
Sbjct: 224 ---LFPGRDYIDQWNKVIEQLGTPCPEFM--KKLQPTVRN 258
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 111/222 (50%), Gaps = 27/222 (12%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCREL-MIASSLHHPNIVPLVGF 125
VLG GA + V + A+K ++K+ RE+ M+ H N++ L+ F
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
+ ++ +L+++ + GGS+ H+H++ R + L SV V +A ++ +LHN
Sbjct: 80 FEEEDR-FYLVFEKMRGGSILSHIHKR----RHFNELEASV---VVQDVASALDFLHN-- 129
Query: 186 ERCVVHRDIKPSNILLS--SKKIP-KLCDFGLATW------TSAPSVPFLCKTVKGTFGY 236
+ + HRD+KP NIL ++ P K+CDF L + S S P L T G+ Y
Sbjct: 130 -KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL-TPCGSAEY 187
Query: 237 LAPE----YFQHGKVSDK-TDVYAFGVVLLELLTGRKPIEAR 273
+APE + + + DK D+++ GV+L LL+G P R
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 64/278 (23%)
Query: 65 GRVLGRGALSFVFKGKV-GLLRT----SVAIKRLDKEDKESS-KAFCRELMIASSL-HHP 117
G+ LGRGA V + G+ +T +VA+K L + S +A EL I + HH
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKK--------KGVRGNS------TLP 163
N+V L+G C P L +I ++ G+L +L K+ KG R +P
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIP 153
Query: 164 WSVR-----------------------------------YKVALGIAESVAY---LHNGT 185
++ YK L + + Y + G
Sbjct: 154 VDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGM 213
Query: 186 E----RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEY 241
E R +HRD+ NILLS K + K+CDFGLA + ++APE
Sbjct: 214 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET 273
Query: 242 FQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGE 278
+ ++DV++FGV+L E+ + G P ++ E
Sbjct: 274 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 311
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTS---VAIKRLDKEDKESSKAFC--RELMIA---SSLHHPNI 119
+G GA VFK + L+ VA+KR+ + E RE+ + + HPN+
Sbjct: 19 IGEGAYGKVFKARD--LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 120 VPLVGFCI----DPEQGLFLIYKYVSGGSLERHLHE-KKKGVRGNSTLPWSVRYKVALGI 174
V L C D E L L++++V L +L + + GV P + +
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV------PTETIKDMMFQL 129
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
+ +LH+ VVHRD+KP NIL++S KL DFGLA S +V T
Sbjct: 130 LRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTL 183
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y APE + D+++ G + E+ RKP+
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +Y GG + HL G P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFXEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+++ + K+ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 23/177 (12%)
Query: 106 RELMIASSLHHPNIVPLVGFCIDP-EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPW 164
+E+ I L HPN+V LV DP E L+++++ V+ G + + + P
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV----------MEVPTLKPL 134
Query: 165 S---VRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 221
S R+ + + + YLH + ++HRDIKPSN+L+ K+ DFG++
Sbjct: 135 SEDQARFYFQ-DLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG- 189
Query: 222 SVPFLCKTVKGTFGYLAPEYFQHGK--VSDKT-DVYAFGVVLLELLTGRKPIEARRL 275
S L TV GT ++APE + S K DV+A GV L + G+ P R+
Sbjct: 190 SDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 17/251 (6%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKE-DKESSKAFCRELMIAS-SLHHPNIVPLVGF 125
LGRGA V K + A+KR+ + + K +L I+ ++ P V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
+G I + SL++ K+ + T+P + K+A+ I +++ +LH +
Sbjct: 102 LF--REGDVWICXELXDTSLDKFY---KQVIDKGQTIPEDILGKIAVSIVKALEHLH--S 154
Query: 186 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATW---TSAPSVPFLCKTVKGTFGYLAPEYF 242
+ V+HRD+KPSN+L+++ K CDFG++ + A + CK + PE
Sbjct: 155 KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAP-ERINPELN 213
Query: 243 QHGKVSDKTDVYAFGVVLLELLTGRKPIEA--RRLQGEENLVLWAKPILHRGMAAVEELL 300
Q G S K+D+++ G+ +EL R P ++ Q + +V P L + E +
Sbjct: 214 QKG-YSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSA-EFV 271
Query: 301 DPRLKCTSRNS 311
D +C +NS
Sbjct: 272 DFTSQCLKKNS 282
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTS---VAIKRLDKEDKESSKAFC--RELMIA---SSLHHPNI 119
+G GA VFK + L+ VA+KR+ + E RE+ + + HPN+
Sbjct: 19 IGEGAYGKVFKARD--LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 120 VPLVGFCI----DPEQGLFLIYKYVSGGSLERHLHE-KKKGVRGNSTLPWSVRYKVALGI 174
V L C D E L L++++V L +L + + GV P + +
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV------PTETIKDMMFQL 129
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
+ +LH+ VVHRD+KP NIL++S KL DFGLA S +V T
Sbjct: 130 LRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTL 183
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y APE + D+++ G + E+ RKP+
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMIA 111
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYKV 170
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+ +
Sbjct: 73 KEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 171 ALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ IA+ +AYL+ VHRD+ N +++ K+ DFG+ + K
Sbjct: 132 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK 186
Query: 229 TVKGTFG--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KG +++PE + G + +DV++FGVVL E+ T
Sbjct: 187 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 66 RVLGRGALSFVFKGKV---GLLRTSVAIKRLDKEDKESSK-AFCRELMIASSLHHPNIVP 121
+++G G V G++ G VAIK L E + F E I HPNI+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L G + ++ +Y+ GSL+ L G T+ V + G+ + YL
Sbjct: 115 LEGVVTRGRLAM-IVTEYMENGSLDTFLRTHD----GQFTIMQLV--GMLRGVGAGMRYL 167
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-TWTSAPSVPFLCKTVKGTFGYLAPE 240
++ VHRD+ N+L+ S + K+ DFGL+ P K + APE
Sbjct: 168 ---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPE 224
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLT-GRKP 269
S +DV++FGVV+ E+L G +P
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMIA 111
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYKV 170
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+ +
Sbjct: 83 KEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 171 ALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ IA+ +AYL+ VHRD+ N +++ K+ DFG+ + K
Sbjct: 142 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK 196
Query: 229 TVKGTFG--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KG +++PE + G + +DV++FGVVL E+ T
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 41/230 (17%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLR-----TSVAIKRLDKEDKESSKAF---CREL 108
A F + + LG G+ G+V L++ A+K LDK+ K E
Sbjct: 38 AQLDQFDRIKTLGTGSF-----GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
I +++ P +V L F L+++ +YV+GG + HL G + P + Y
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFY 146
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPS 222
A I + YLH+ +++RD+KP N+L+ + ++ DFG A TW
Sbjct: 147 --AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---- 197
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
LC GT LAPE + D +A GV++ E+ G P A
Sbjct: 198 ---LC----GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 94/222 (42%), Gaps = 22/222 (9%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF--CRELMIASSLH 115
AT + +G GA V+K + VA+K + + E RE+ + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 116 ---HPNIVPLVGFC----IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
HPN+V L+ C D E + L++++V L +L + LP
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPP-----PGLPAETIK 115
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ + +LH C+VHRD+KP NIL++S KL DFGLA S F
Sbjct: 116 DLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALF--- 169
Query: 229 TVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
V T Y APE + D+++ G + E+ RKP+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 22/254 (8%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + +G GA V +L +VAIK+L + +++ +K REL++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 120 VPLVGFCIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ L+ P++ L Y+ ++ +L + + + + + + Y++ GI
Sbjct: 86 IGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK--- 140
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+LH+ ++HRD+KPSNI++ S K+ DFGLA T+ S F+ T Y A
Sbjct: 141 -HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTS--FMMTPYVVTRYYRA 193
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMAAVEE 298
PE + D+++ G ++ E++ G G +++ W K I G + E
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQWNKVIEQLGTPSPEF 248
Query: 299 L--LDPRLKCTSRN 310
+ L P ++ N
Sbjct: 249 MKKLQPTVRTYVEN 262
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P +V L F L+++ +Y GG + HL G + P + Y A
Sbjct: 98 VNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 149
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+++ + ++ DFG A TW LC
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWX-------LC 199
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 200 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMIA 111
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYKV 170
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+ +
Sbjct: 76 KEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 171 ALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ IA+ +AYL+ VHRD+ N +++ K+ DFG+ + K
Sbjct: 135 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK 189
Query: 229 TVKGTFG--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KG +++PE + G + +DV++FGVVL E+ T
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 17/220 (7%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 110
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 111 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 169
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 69 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 170 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLC 227
+ + IA+ +AYL+ VHRD+ N +++ K+ DFG+ +
Sbjct: 128 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 182
Query: 228 KTVKGTFG--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
K KG +++PE + G + +DV++FGVVL E+ T
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 68 LGRGALSFVFKGKVGLLRTS---VAIKRLDKEDKESSKAFC--RELMIA---SSLHHPNI 119
+G GA VFK + L+ VA+KR+ + E RE+ + + HPN+
Sbjct: 19 IGEGAYGKVFKARD--LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 120 VPLVGFCI----DPEQGLFLIYKYVSGGSLERHLHE-KKKGVRGNSTLPWSVRYKVALGI 174
V L C D E L L++++V L +L + + GV P + +
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV------PTETIKDMMFQL 129
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
+ +LH+ VVHRD+KP NIL++S KL DFGLA S +V T
Sbjct: 130 LRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTL 183
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y APE + D+++ G + E+ RKP+
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 88 VAIKRLDKEDKESSKAFCR-ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLE 146
VAIK +DK S + E+ +L H +I L ++ +F++ +Y GG L
Sbjct: 38 VAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLY-HVLETANKIFMVLEYCPGGELF 96
Query: 147 RHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKI 206
++ + + + + V I +VAY+H+ + HRD+KP N+L
Sbjct: 97 DYIISQDRLSEEETRV-------VFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHK 146
Query: 207 PKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGK--VSDKTDVYAFGVVLLELL 264
KL DFGL + + +T G+ Y APE Q GK + + DV++ G++L L+
Sbjct: 147 LKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQ-GKSYLGSEADVWSMGILLYVLM 204
Query: 265 TGRKPIEARRLQGEENLVLWAKPILHRGMAAVEELLDP 302
G P + ++N++ K I+ RG V + L P
Sbjct: 205 CGFLPFD------DDNVMALYKKIM-RGKYDVPKWLSP 235
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG GA V + + A K + + + +E+ S L HP +V L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHD-AF 223
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
+ + + +IY+++SGG L + ++ + + + + + + + + ++H E
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ------VCKGLCHMH---EN 274
Query: 188 CVVHRDIKPSNILLSSKKIP--KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHG 245
VH D+KP NI+ ++K+ KL DFGL K GT + APE +
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVAEGK 331
Query: 246 KVSDKTDVYAFGVVLLELLTGRKPI 270
V TD+++ GV+ LL+G P
Sbjct: 332 PVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMIA 111
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYKV 170
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+ +
Sbjct: 76 KEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 171 ALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ IA+ +AYL+ VHRD+ N +++ K+ DFG+ + K
Sbjct: 135 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK 189
Query: 229 TVKGTFG--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KG +++PE + G + +DV++FGVVL E+ T
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMIA 111
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYKV 170
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+ +
Sbjct: 83 KEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 171 ALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ IA+ +AYL+ VHRD+ N +++ K+ DFG+ + K
Sbjct: 142 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK 196
Query: 229 TVKGTFG--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KG +++PE + G + +DV++FGVVL E+ T
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMIA 111
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYKV 170
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+ +
Sbjct: 77 KEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 171 ALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ IA+ +AYL+ VHRD+ N +++ K+ DFG+ + K
Sbjct: 136 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK 190
Query: 229 TVKGTFG--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KG +++PE + G + +DV++FGVVL E+ T
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMIA 111
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYKV 170
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+ +
Sbjct: 74 KEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 171 ALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ IA+ +AYL+ VHRD+ N +++ K+ DFG+ + K
Sbjct: 133 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK 187
Query: 229 TVKGTFG--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KG +++PE + G + +DV++FGVVL E+ T
Sbjct: 188 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG GA V + + A K + + + +E+ S L HP +V L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHD-AF 117
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
+ + + +IY+++SGG L + ++ + + + + + + + + ++H E
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ------VCKGLCHMH---EN 168
Query: 188 CVVHRDIKPSNILLSSKKIP--KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHG 245
VH D+KP NI+ ++K+ KL DFGL K GT + APE +
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVAEGK 225
Query: 246 KVSDKTDVYAFGVVLLELLTGRKPI 270
V TD+++ GV+ LL+G P
Sbjct: 226 PVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 93/225 (41%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P + L F L+++ +Y GG + HL G + P + Y A
Sbjct: 99 VNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+++ + K+ DFG A TW LC
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-------LC 200
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 201 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKE-DKESSKAFCRELMIASSLHH-PNIVPLVGF 125
+G G V+K + +A+K++ + +KE +K +L + H P IV G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
I +F+ + + G+ L ++ +G +P + K+ + I +++ YL
Sbjct: 93 FI-TNTDVFIAMELM--GTCAEKLKKRMQG-----PIPERILGKMTVAIVKALYYLKE-- 142
Query: 186 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHG 245
+ V+HRD+KPSNILL + KLCDFG++ G Y+APE
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DRSAGCAAYMAPERIDPP 199
Query: 246 KVSD-----KTDVYAFGVVLLELLTGRKP 269
+ + DV++ G+ L+EL TG+ P
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 93/225 (41%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P + L F L+++ +Y GG + HL G + P + Y A
Sbjct: 99 VNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFY--AAQ 150
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+++ + K+ DFG A TW LC
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-------LC 200
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 201 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 39 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 95
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 96 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 150
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 120
Query: 151 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 210
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 121 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDXTLKIL 168
Query: 211 DFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
DFGLA T+ S F+ T Y APE + D+++ G ++ E++ +
Sbjct: 169 DFGLAR-TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI-- 223
Query: 271 EARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRN 310
G + + W K I G E + +L+ T RN
Sbjct: 224 ---LFPGRDYIDQWNKVIEQLGTPCPEFM--KKLQPTVRN 258
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 93/222 (41%), Gaps = 22/222 (9%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF--CRELMIASSLH 115
AT + +G GA V+K + VA+K + + E RE+ + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 116 ---HPNIVPLVGFC----IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
HPN+V L+ C D E + L++++V L +L + LP
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPP-----PGLPAETIK 115
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ + +LH C+VHRD+KP NIL++S KL DFGLA S
Sbjct: 116 DLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALD 169
Query: 229 TVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
V T Y APE + D+++ G + E+ RKP+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 22/254 (8%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + +G GA V +L +VAIK+L + +++ +K REL++ ++H NI
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 120 VPLVGFCIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ L+ P++ L Y+ ++ +L + + + + + + Y++ GI
Sbjct: 87 IGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK--- 141
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+LH+ ++HRD+KPSNI++ S K+ DFGLA T+ S F+ T Y A
Sbjct: 142 -HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTS--FMMTPYVVTRYYRA 194
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMAAVEE 298
PE + D+++ G ++ E++ G G +++ W K I G E
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQWNKVIEQLGTPCPEF 249
Query: 299 L--LDPRLKCTSRN 310
+ L P ++ N
Sbjct: 250 MKKLQPTVRTYVEN 263
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 29/260 (11%)
Query: 30 WRKIQSLERSISPVANSLIRLSYGEILA-ATHNFSKGRVLGRGALSFVFKGKV-GLLRTS 87
W+ I+S E + + +L Y E +N G+ LG GA V + GL +
Sbjct: 1 WKIIESYEGNSYTFIDP-TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKED 59
Query: 88 ----VAIKRLDKEDKESSK-AFCRELMIASSL-HHPNIVPLVGFCIDPEQGLFLIYKYVS 141
VA+K L K A EL I S L H NIV L+G C + +I +Y
Sbjct: 60 AVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP-VLVITEYCC 118
Query: 142 GGSLERHLHEKKKGVRGNSTLP--------------WSVRYKVALG--IAESVAYLHNGT 185
G L L K + + G S P +R + +A+ +A+L +
Sbjct: 119 YGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL--AS 176
Query: 186 ERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHG 245
+ C+ HRD+ N+LL++ + K+ DFGLA S + + ++APE
Sbjct: 177 KNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC 235
Query: 246 KVSDKTDVYAFGVVLLELLT 265
+ ++DV+++G++L E+ +
Sbjct: 236 VYTVQSDVWSYGILLWEIFS 255
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 22/254 (8%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + +G GA V +L +VAIK+L + +++ +K REL++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 120 VPLVGFCIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ L+ P++ L Y+ ++ +L + + + + + + Y++ GI
Sbjct: 86 IGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK--- 140
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+LH+ ++HRD+KPSNI++ S K+ DFGLA T+ S F+ T Y A
Sbjct: 141 -HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTS--FMMTPYVVTRYYRA 193
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMAAVEE 298
PE + D+++ G ++ E++ G G +++ W K I G E
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQWNKVIEQLGTPCPEF 248
Query: 299 L--LDPRLKCTSRN 310
+ L P ++ N
Sbjct: 249 MKKLQPTVRTYVEN 262
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 17/220 (7%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 110
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 44 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 103
Query: 111 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 169
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 104 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 162
Query: 170 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLC 227
+ + IA+ +AYL+ VHRD+ N +++ K+ DFG+ +
Sbjct: 163 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 217
Query: 228 KTVKGTFG--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
K KG +++PE + G + +DV++FGVVL E+ T
Sbjct: 218 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 143/368 (38%), Gaps = 57/368 (15%)
Query: 39 SISPVANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDK 98
S SP A SL + + F ++G G V+KG+ AIK +D
Sbjct: 4 SDSP-ARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD 62
Query: 99 ESSKAFCRELMIASSLHHPNIVPLVGFCI--DP---EQGLFLIYKYVSGGSLERHLHEKK 153
E + M+ HH NI G I +P + L+L+ ++ GS+ +
Sbjct: 63 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI---- 118
Query: 154 KGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFG 213
K +GN+ + Y + I +++LH + V+HRDIK N+LL+ KL DFG
Sbjct: 119 KNTKGNTLKEEWIAY-ICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFG 174
Query: 214 LATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSD-----KTDVYAFGVVLLELLTGRK 268
++ T GT ++APE + D K+D+++ G+ +E+ G
Sbjct: 175 VS--AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
Query: 269 PIEARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRNSXXXXXXXXXXXXCISSE 328
P+ P+ R + + PRLK + C+
Sbjct: 233 PL------------CDMHPM--RALFLIPRNPAPRLKSKKWSK----KFQSFIESCLVKN 274
Query: 329 ESRRPGIEEIIAILRGEEELIYCTWKKHNFSGIIDCYPQLQQTKSEMKSHLALAMVGVSE 388
S+RP E+++ KH F I P +Q + ++K H+ E
Sbjct: 275 HSQRPATEQLM---------------KHPF---IRDQPNERQVRIQLKDHIDRTKKKRGE 316
Query: 389 FEEDDHLY 396
+E ++ Y
Sbjct: 317 KDETEYEY 324
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 28/199 (14%)
Query: 159 NSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT 218
+ +P + K+ L +++ +L + ++HRDIKPSNILL KLCDFG+
Sbjct: 119 DDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGI---- 172
Query: 219 SAPSVPFLCKTVK-GTFGYLAPEYFQHGKVSD----KTDVYAFGVVLLELLTGRKPIEAR 273
S V + KT G Y+APE ++DV++ G+ L EL TGR P
Sbjct: 173 SGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP-- 230
Query: 274 RLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRP 333
+ N V + +G DP S C++ +ES+RP
Sbjct: 231 ----KWNSVFDQLTQVVKG--------DPPQLSNSEEREFSPSFINFVNLCLTKDESKRP 278
Query: 334 GIEEIIA---ILRGEEELI 349
+E++ IL EE +
Sbjct: 279 KYKELLKHPFILMYEERAV 297
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 40 ISPVANSLIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDK 98
+ P + + G+ +++ + +G GA V + +T VAIK++ E +
Sbjct: 23 VGPGVPGEVEMVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQ 82
Query: 99 ESSKAFCRELMIASSLHHPNIVP----LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKK 154
+ RE+ I H N++ L ++ + ++++ +E L++ K
Sbjct: 83 TYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDL-----METDLYKLLK 137
Query: 155 GVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGL 214
+ ++ Y++ G+ Y+H+ V+HRD+KPSN+L+++ K+CDFGL
Sbjct: 138 SQQLSNDHICYFLYQILRGLK----YIHSAN---VLHRDLKPSNLLINTTCDLKICDFGL 190
Query: 215 ATWTSA--PSVPFLCKTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIE 271
A FL + V T Y APE + K K+ D+++ G +L E+L+ R
Sbjct: 191 ARIADPEHDHTGFLTEXV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 249
Query: 272 ARRLQGEENLVL 283
+ + N +L
Sbjct: 250 GKHYLDQLNHIL 261
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 93/222 (41%), Gaps = 22/222 (9%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF--CRELMIASSLH 115
AT + +G GA V+K + VA+K + + E RE+ + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 116 ---HPNIVPLVGFC----IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
HPN+V L+ C D E + L++++V L +L + LP
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPP-----PGLPAETIK 115
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ + +LH C+VHRD+KP NIL++S KL DFGLA S
Sbjct: 116 DLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALA 169
Query: 229 TVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
V T Y APE + D+++ G + E+ RKP+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 30/256 (11%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + +G GA V +L +VAIK+L + +++ +K REL++ ++H NI
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 120 VPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
+ L+ ++ Q ++L+ + + +L + + + R + L Y++ GI
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQMELDHERMSYLL-----YQMLXGI 132
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
+LH+ ++HRD+KPSNI++ S K+ DFGLA T+ S F+ T
Sbjct: 133 K----HLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTS--FMMTPYVVTR 182
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMA 294
Y APE + D+++ G ++ E++ + G + + W K I G
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI-----LFPGRDYIDQWNKVIEQLGTP 237
Query: 295 AVEELLDPRLKCTSRN 310
E + +L+ T RN
Sbjct: 238 CPEFM--KKLQPTVRN 251
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 117 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 121 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 175
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLAT-WTSAPSVPFLCKT 229
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A TS S+ C T
Sbjct: 176 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 232
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y+APE K D+++ GV++ LL G P
Sbjct: 233 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 117 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 169
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLAT-WTSAPSVPFLCKT 229
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A TS S+ C T
Sbjct: 170 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 226
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y+APE K D+++ GV++ LL G P
Sbjct: 227 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT-----------WT 218
+ + IAE+V +LH+ + ++HRD+KPSNI + + K+ DFGL T T
Sbjct: 169 IFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 219 SAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELL 264
P+ V GT Y++PE S K D+++ G++L ELL
Sbjct: 226 PMPAYATHXGQV-GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE-SSKAFCRELMIASSLHHPNI 119
+F + +GRG VF+ K + + AIKR+ ++E + + RE+ + L HP I
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 120 V 120
V
Sbjct: 67 V 67
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 110
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 111 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 169
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 69 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 170 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLC 227
+ + IA+ +AYL+ VHRD+ N ++ K+ DFG+ +
Sbjct: 128 IQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETDYYR 182
Query: 228 KTVKGTFG--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
K KG +++PE + G + +DV++FGVVL E+ T
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF---CRELMIASS 113
A F + + LG G+ V K A+K LDK+ K E I +
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
++ P + L F L+++ +Y GG + HL G P + Y A
Sbjct: 99 VNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFXEPHARFY--AAQ 150
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------TWTSAPSVPFLC 227
I + YLH+ +++RD+KP N+++ + K+ DFG A TW LC
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-------LC 200
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
GT YLAPE + D +A GV++ E+ G P A
Sbjct: 201 ----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMI 110
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 7 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 111 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYK 169
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+
Sbjct: 67 MKEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 170 VALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLC 227
+ + IA+ +AYL+ VHRD+ N +++ K+ DFG+
Sbjct: 126 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXR 180
Query: 228 KTVKGTFG--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
K KG +++PE + G + +DV++FGVVL E+ T
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 22/254 (8%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + +G GA V +L +VAIK+L + +++ +K REL++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 120 VPLVGFCIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ L+ P++ L Y+ ++ +L + + + + + + Y++ GI
Sbjct: 86 IGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK--- 140
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+LH+ ++HRD+KPSNI++ S K+ DFGLA T+ S F+ T Y A
Sbjct: 141 -HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTS--FMMTPEVVTRYYRA 193
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMAAVEE 298
PE + D+++ G ++ E++ G G +++ W K I G E
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQWNKVIEQLGTPCPEF 248
Query: 299 L--LDPRLKCTSRN 310
+ L P ++ N
Sbjct: 249 MKKLQPTVRTYVEN 262
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 117 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 125
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLAT-WTSAPSVPFLCKT 229
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A TS S+ C T
Sbjct: 126 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 182
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y+APE K D+++ GV++ LL G P
Sbjct: 183 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 91/224 (40%), Gaps = 20/224 (8%)
Query: 53 GEILAATHN-FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCREL 108
G + T N F ++LG+G V K A+K L KE K+ E
Sbjct: 1 GAMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 60
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
+ + HP + L + L + +Y +GG L HL ++ +
Sbjct: 61 RVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF------ 113
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT--WTSAPSVPFL 226
I ++ YLH +E+ VV+RD+K N++L K+ DFGL ++
Sbjct: 114 -YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF 170
Query: 227 CKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
C GT YLAPE + D + GVV+ E++ GR P
Sbjct: 171 C----GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 117 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 76 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 130
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLAT-WTSAPSVPFLCKT 229
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A TS S+ C T
Sbjct: 131 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 187
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y+APE K D+++ GV++ LL G P
Sbjct: 188 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 117 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 125
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLAT-WTSAPSVPFLCKT 229
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A TS S+ C T
Sbjct: 126 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 182
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y+APE K D+++ GV++ LL G P
Sbjct: 183 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 16/142 (11%)
Query: 133 LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHR 192
L ++ + + GG L + + RG+ ++ I E++ YLH+ + HR
Sbjct: 94 LLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 145
Query: 193 DIKPSNILLSSKK---IPKLCDFGLAT-WTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVS 248
D+KP N+L +SK+ I KL DFG A TS S+ C T Y+APE K
Sbjct: 146 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY----YVAPEVLGPEKYD 201
Query: 249 DKTDVYAFGVVLLELLTGRKPI 270
D+++ GV++ LL G P
Sbjct: 202 KSCDMWSLGVIMYILLCGYPPF 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 117 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 123
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLAT-WTSAPSVPFLCKT 229
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A TS S+ C T
Sbjct: 124 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 180
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y+APE K D+++ GV++ LL G P
Sbjct: 181 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 16/142 (11%)
Query: 133 LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHR 192
L ++ + + GG L + + RG+ ++ I E++ YLH+ + HR
Sbjct: 104 LLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 155
Query: 193 DIKPSNILLSSKK---IPKLCDFGLAT-WTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVS 248
D+KP N+L +SK+ I KL DFG A TS S+ C T Y+APE K
Sbjct: 156 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY----YVAPEVLGPEKYD 211
Query: 249 DKTDVYAFGVVLLELLTGRKPI 270
D+++ GV++ LL G P
Sbjct: 212 KSCDMWSLGVIMYILLCGYPPF 233
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 17/219 (7%)
Query: 58 ATHNFSKGRVLGRGALSFVFKGKV-GLLR----TSVAIKRLDKEDKESSK-AFCRELMIA 111
A + R LG+G+ V++G G+++ T VAIK +++ + F E +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 112 SSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTL-PWSVRYKV 170
+ ++V L+G + Q +I + ++ G L+ +L + + N L P S+ +
Sbjct: 77 KEFNCHHVVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 171 ALG--IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ IA+ +AYL+ VHRD+ N +++ K+ DFG+ K
Sbjct: 136 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXRK 190
Query: 229 TVKGTFG--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
KG +++PE + G + +DV++FGVVL E+ T
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 117 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 77 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 131
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLAT-WTSAPSVPFLCKT 229
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A TS S+ C T
Sbjct: 132 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 188
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y+APE K D+++ GV++ LL G P
Sbjct: 189 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 117 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 70 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 124
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLAT-WTSAPSVPFLCKT 229
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A TS S+ C T
Sbjct: 125 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 181
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y+APE K D+++ GV++ LL G P
Sbjct: 182 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 35/282 (12%)
Query: 39 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 95
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 40 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 99
Query: 96 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 150
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 100 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 158
Query: 151 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 210
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 159 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKIL 206
Query: 211 DFGLA--TWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRK 268
DFGLA TS P++ T Y APE + D+++ G ++ E++ R
Sbjct: 207 DFGLARTAGTSFMMTPYVV-----TRYYRAPEVILGMGYKENVDIWSVGCIMGEMV--RH 259
Query: 269 PIEARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRN 310
I G + + W K I G E + +L+ T RN
Sbjct: 260 KI---LFPGRDYIDQWNKVIEQLGTPCPEFM--KKLQPTVRN 296
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 19/216 (8%)
Query: 60 HNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHH 116
+ F ++LG+G V K A+K L KE K+ E + + H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P + L + L + +Y +GG L HL ++ + I
Sbjct: 68 PFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVS 119
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT--WTSAPSVPFLCKTVKGTF 234
++ YLH +E+ VV+RD+K N++L K+ DFGL ++ C GT
Sbjct: 120 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC----GTP 173
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
YLAPE + D + GVV+ E++ GR P
Sbjct: 174 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 116/235 (49%), Gaps = 39/235 (16%)
Query: 68 LGRGALSFVFKG---KVG----LLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
LG+G + +FKG +VG L T V +K LDK + S++F + S L H ++V
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
G C+ ++ + L+ ++V GSL+ +L + K + + W + +VA +A ++ +
Sbjct: 76 LNYGVCVCGDENI-LVQEFVKFGSLDTYLKKNKNCI----NILW--KLEVAKQLAAAMHF 128
Query: 181 LHNGTERCVVHRDIKPSNILL--------SSKKIPKLCDFGLATWTSAPSVPFLCKTV-K 231
L T ++H ++ NILL + KL D G+ S+ L K + +
Sbjct: 129 LEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGI-------SITVLPKDILQ 178
Query: 232 GTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLT-GRKPIEA----RRLQGEEN 280
++ PE ++ K ++ TD ++FG L E+ + G KP+ A R+LQ E+
Sbjct: 179 ERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED 233
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
Query: 133 LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHR 192
L +I + + GG L + E RG+ ++ I ++ +LH+ + HR
Sbjct: 82 LLIIMECMEGGELFSRIQE-----RGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHR 133
Query: 193 DIKPSNILLSSKK---IPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSD 249
D+KP N+L +SK+ + KL DFG A T+ ++ C T Y+APE K
Sbjct: 134 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY----YVAPEVLGPEKYDK 189
Query: 250 KTDVYAFGVVLLELLTGRKPI 270
D+++ GV++ LL G P
Sbjct: 190 SCDMWSLGVIMYILLCGFPPF 210
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 19/216 (8%)
Query: 60 HNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---DKESSKAFCRELMIASSLHH 116
+ F ++LG+G V K A+K L KE K+ E + + H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 117 PNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAE 176
P + L + L + +Y +GG L HL ++ + I
Sbjct: 70 PFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVS 121
Query: 177 SVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLAT--WTSAPSVPFLCKTVKGTF 234
++ YLH +E+ VV+RD+K N++L K+ DFGL ++ C GT
Sbjct: 122 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC----GTP 175
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
YLAPE + D + GVV+ E++ GR P
Sbjct: 176 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 39 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 95
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 3 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 62
Query: 96 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 150
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 63 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 121
Query: 151 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 210
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 122 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKIL 169
Query: 211 DFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
DFGLA T+ S F+ T Y APE + D+++ G ++ E++ +
Sbjct: 170 DFGLAR-TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI-- 224
Query: 271 EARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRN 310
G + + W K I G E + +L+ T RN
Sbjct: 225 ---LFPGRDYIDQWNKVIEQLGTPCPEFM--KKLQPTVRN 259
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 22/256 (8%)
Query: 27 ELKWRKIQSLERSISPVANSLIRLSYGEILA-ATHNFSKGRVLGRGALSFVFKGKV-GLL 84
+++W+ I+S E + + +L Y E +N G+ LG GA V + GL
Sbjct: 13 QVRWKIIESYEGNSYTFIDP-TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLG 71
Query: 85 RTS----VAIKRLDKEDKESSK-AFCRELMIASSL-HHPNIVPLVGFCIDPEQGLFLIYK 138
+ VA+K L K A EL I S L H NIV L+G C + +I +
Sbjct: 72 KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP-VLVITE 130
Query: 139 YVSGGSLERHLHEKKKGVRGNSTLP-------WSVR--YKVALGIAESVAYLHNGTERCV 189
Y G L L K+ S P S R + +A+ +A+L ++ C+
Sbjct: 131 YCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL--ASKNCI 188
Query: 190 VHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSD 249
HRD+ N+LL++ + K+ DFGLA S + + ++APE +
Sbjct: 189 -HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 247
Query: 250 KTDVYAFGVVLLELLT 265
++DV+++G++L E+ +
Sbjct: 248 QSDVWSYGILLWEIFS 263
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 18/215 (8%)
Query: 60 HNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKR--LDKEDKESSKAFCRELMIASSLHHP 117
+ K +G G VFK K VA+KR LD +D+ + RE+ + L H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAES 177
NIV L + ++ L L++++ KK N L + + +
Sbjct: 62 NIVRLHD-VLHSDKKLTLVFEFCDQDL-------KKYFDSCNGDLDPEIVKSFLFQLLKG 113
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK-GTFGY 236
+ + H+ R V+HRD+KP N+L++ KL +FGLA A +P C + + T Y
Sbjct: 114 LGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLA---RAFGIPVRCYSAEVVTLWY 167
Query: 237 LAPEYFQHGKV-SDKTDVYAFGVVLLELLTGRKPI 270
P+ K+ S D+++ G + EL +P+
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
Query: 133 LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHR 192
L +I + + GG L + E RG+ ++ I ++ +LH+ + HR
Sbjct: 101 LLIIMECMEGGELFSRIQE-----RGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHR 152
Query: 193 DIKPSNILLSSKK---IPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSD 249
D+KP N+L +SK+ + KL DFG A T+ ++ C T Y+APE K
Sbjct: 153 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY----YVAPEVLGPEKYDK 208
Query: 250 KTDVYAFGVVLLELLTGRKPI 270
D+++ GV++ LL G P
Sbjct: 209 SCDMWSLGVIMYILLCGFPPF 229
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 88 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 147
VA+K +++ +K + RE++ SL HPNIV + P L ++ +Y SGG L
Sbjct: 47 VAVKYIERGEK-IDENVKREIINHRSLRHPNIVRFKEVILTPTH-LAIVMEYASGGELFE 104
Query: 148 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP 207
+ + + + + V+Y H V HRD+K N LL P
Sbjct: 105 RICNAGRFSEDEARFFFQ-------QLISGVSYAHAMQ---VAHRDLKLENTLLDGSPAP 154
Query: 208 --KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELL 264
K+ DFG + + S P K+ GT Y+APE + K DV++ GV L +L
Sbjct: 155 RLKIADFGYSKASVLHSQP---KSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 265 TGRKPIE 271
G P E
Sbjct: 212 VGAYPFE 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
E+ I SL H ++V GF D +F++ + SL LH+++K + T P +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFED-NDFVFVVLELCRRRSL-LELHKRRKAL----TEPEAR 120
Query: 167 RY--KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVP 224
Y ++ LG YLH V+HRD+K N+ L+ K+ DFGLAT
Sbjct: 121 YYLRQIVLG----CQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 172
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
KT+ GT Y+APE S + DV++ G ++ LL G+ P E L+
Sbjct: 173 -RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 39 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 95
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 1 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 60
Query: 96 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 150
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 61 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 119
Query: 151 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 210
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 120 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKIL 167
Query: 211 DFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
DFGLA T+ S F+ T Y APE + D+++ G ++ E++ +
Sbjct: 168 DFGLAR-TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI-- 222
Query: 271 EARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRN 310
G + + W K I G E + +L+ T RN
Sbjct: 223 ---LFPGRDYIDQWNKVIEQLGTPCPEFM--KKLQPTVRN 257
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 117 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 123
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLAT-WTSAPSVPFLCKT 229
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A TS S+ C T
Sbjct: 124 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYT 180
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y+APE K D+++ GV++ LL G P
Sbjct: 181 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 39 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 95
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 96 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 150
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 120
Query: 151 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 210
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 121 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKIL 168
Query: 211 DFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
DFGLA T+ S F+ T Y APE + D+++ G ++ E++ +
Sbjct: 169 DFGLAR-TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI-- 223
Query: 271 EARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRN 310
G + + W K I G E + +L+ T RN
Sbjct: 224 ---LFPGRDYIDQWNKVIEQLGTPCPEFM--KKLQPTVRN 258
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 39 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 95
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 3 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 62
Query: 96 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 150
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 63 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 121
Query: 151 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 210
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 122 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKIL 169
Query: 211 DFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
DFGLA T+ S F+ T Y APE + D+++ G ++ E++ +
Sbjct: 170 DFGLAR-TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI-- 224
Query: 271 EARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRN 310
G + + W K I G E + +L+ T RN
Sbjct: 225 ---LFPGRDYIDQWNKVIEQLGTPCPEFM--KKLQPTVRN 259
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
E+ I SL H ++V GF D +F++ + SL LH+++K + T P +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFED-NDFVFVVLELCRRRSL-LELHKRRKAL----TEPEAR 120
Query: 167 RY--KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVP 224
Y ++ LG YLH V+HRD+K N+ L+ K+ DFGLAT
Sbjct: 121 YYLRQIVLG----CQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 172
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
KT+ GT Y+APE S + DV++ G ++ LL G+ P E L+
Sbjct: 173 -RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 223
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
E+ I SL H ++V GF D +F++ + SL LH+++K + T P +
Sbjct: 71 EISIHRSLAHQHVVGFHGFFED-NDFVFVVLELCRRRSL-LELHKRRKAL----TEPEAR 124
Query: 167 RY--KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVP 224
Y ++ LG YLH V+HRD+K N+ L+ K+ DFGLAT
Sbjct: 125 YYLRQIVLG----CQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 176
Query: 225 FLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
KT+ GT Y+APE S + DV++ G ++ LL G+ P E L+
Sbjct: 177 -RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 227
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 39 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 95
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 96 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 150
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 120
Query: 151 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 210
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 121 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKIL 168
Query: 211 DFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
DFGLA T+ S F+ T Y APE + D+++ G ++ E++ +
Sbjct: 169 DFGLAR-TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI-- 223
Query: 271 EARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRN 310
G + + W K I G E + +L+ T RN
Sbjct: 224 ---LFPGRDYIDQWNKVIEQLGTPCPEFM--KKLQPTVRN 258
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 39 SISPVANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-- 95
S S V N + G+ + + +G GA V +L +VAIK+L +
Sbjct: 40 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 99
Query: 96 EDKESSKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLH 150
+++ +K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + +
Sbjct: 100 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ 158
Query: 151 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLC 210
+ R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+
Sbjct: 159 MELDHERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKIL 206
Query: 211 DFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
DFGLA T+ S F+ T Y APE + D+++ G ++ E++ +
Sbjct: 207 DFGLAR-TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--- 260
Query: 271 EARRLQGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRN 310
G + + W K I G E + +L+ T RN
Sbjct: 261 --ILFPGRDYIDQWNKVIEQLGTPCPEFM--KKLQPTVRN 296
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 88 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 147
VA+K +++ +K + RE++ SL HPNIV + P L ++ +Y SGG L
Sbjct: 47 VAVKYIERGEK-IDENVKREIINHRSLRHPNIVRFKEVILTPTH-LAIVMEYASGGELFE 104
Query: 148 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP 207
+ + + + + V+Y H V HRD+K N LL P
Sbjct: 105 RICNAGRFSEDEARFFFQ-------QLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAP 154
Query: 208 --KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELL 264
K+C FG + + S P K+ GT Y+APE + K DV++ GV L +L
Sbjct: 155 RLKICAFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 265 TGRKPIE 271
G P E
Sbjct: 212 VGAYPFE 218
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 133 LFLIYKYVSGGSL-ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVH 191
+ LI +Y +GG + L E + V N + ++ I E V YLH +VH
Sbjct: 104 IILILEYAAGGEIFSLCLPELAEMVSENDVI------RLIKQILEGVYYLHQNN---IVH 154
Query: 192 RDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLC--KTVKGTFGYLAPEYFQHGKVSD 249
D+KP NILLSS I L D + + + + C + + GT YLAPE + ++
Sbjct: 155 LDLKPQNILLSS--IYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITT 212
Query: 250 KTDVYAFGVVLLELLTGRKPIEARRLQGEEN 280
TD++ G++ LLT P GE+N
Sbjct: 213 ATDMWNIGIIAYMLLTHTSP-----FVGEDN 238
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 31/275 (11%)
Query: 44 ANSLIRLSYGE-ILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKES 100
AN + G+ + + +G GA V +L +VAIK+L + +++
Sbjct: 1 ANQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH 60
Query: 101 SKAFCRELMIASSLHHPNIVPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKG 155
+K REL++ ++H NI+ L+ ++ Q ++L+ + + +L + + +
Sbjct: 61 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQMELDH 119
Query: 156 VRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 215
R + L Y++ GI +LH+ ++HRD+KPSNI++ S K+ DFGLA
Sbjct: 120 ERMSYLL-----YQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 167
Query: 216 TWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRL 275
T+ S F+ T Y APE + D+++ G ++ E++ +
Sbjct: 168 R-TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI-----LF 219
Query: 276 QGEENLVLWAKPILHRGMAAVEELLDPRLKCTSRN 310
G + + W K I G E + +L+ T RN
Sbjct: 220 PGRDYIDQWNKVIEQLGTPCPEFM--KKLQPTVRN 252
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 110/272 (40%), Gaps = 24/272 (8%)
Query: 54 EILAATHNFSKGRVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSKAFCREL 108
++L F+ GR+LG+G V + ++ ++ +V + + D + F RE
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 109 MIASSLHHPNIVPLVGFCIDPEQG-----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLP 163
HP++ LVG + +I ++ G L L + G LP
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIG-ENPFNLP 135
Query: 164 WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSV 223
+ + IA + YL + R +HRD+ N +L+ + DFGL+ +
Sbjct: 136 LQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
Query: 224 PFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT-GRKPIEARRLQGEENLV 282
K +LA E + +DV+AFGV + E++T G+ P G EN
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP-----YAGIENAE 247
Query: 283 LWAKPI----LHRGMAAVEELLDPRLKCTSRN 310
++ I L + +EE+ D +C S +
Sbjct: 248 IYNYLIGGNRLKQPPECMEEVYDLMYQCWSAD 279
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 107/238 (44%), Gaps = 19/238 (7%)
Query: 53 GEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIA 111
G++ ++ +G GA V + + VAIK++ E + + RE+ I
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 112 SSLHHPNIVPLVGFCIDP--EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
H NI+ + P EQ + Y+ +E L++ K ++ Y+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQ---MKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ 132
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS---VPFL 226
+ G+ Y+H+ V+HRD+KPSN+LL++ K+ DFGLA + P FL
Sbjct: 133 ILRGLK----YIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLAR-VADPDHDHTGFL 184
Query: 227 CKTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+ V T Y APE + K K+ D+++ G +L E+L+ R + + N +L
Sbjct: 185 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 114/236 (48%), Gaps = 41/236 (17%)
Query: 68 LGRGALSFVFKG---KVG----LLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
LG+G + +FKG +VG L T V +K LDK + S++F + S L H ++V
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 121 PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
G C ++ + L+ ++V GSL+ +L + K + + W L +A+ +A+
Sbjct: 76 LNYGVCFCGDENI-LVQEFVKFGSLDTYLKKNKNCI----NILWK------LEVAKQLAW 124
Query: 181 -LHNGTERCVVHRDIKPSNILL--------SSKKIPKLCDFGLATWTSAPSVPFLCKTV- 230
+H E ++H ++ NILL + KL D G+ S+ L K +
Sbjct: 125 AMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGI-------SITVLPKDIL 177
Query: 231 KGTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLT-GRKPIEA----RRLQGEEN 280
+ ++ PE ++ K ++ TD ++FG L E+ + G KP+ A R+LQ E+
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED 233
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 18/187 (9%)
Query: 88 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER 147
VA+K +++ +K + RE++ SL HPNIV + P L ++ +Y SGG L
Sbjct: 47 VAVKYIERGEK-IDENVKREIINHRSLRHPNIVRFKEVILTPTH-LAIVMEYASGGELFE 104
Query: 148 HLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIP 207
+ + + + + V+Y H V HRD+K N LL P
Sbjct: 105 RICNAGRFSEDEARFFFQ-------QLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAP 154
Query: 208 --KLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELL 264
K+C FG + + S P K GT Y+APE + K DV++ GV L +L
Sbjct: 155 RLKICAFGYSKSSVLHSQP---KDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 265 TGRKPIE 271
G P E
Sbjct: 212 VGAYPFE 218
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 30/256 (11%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + +G GA V +L +VAIK+L + +++ +K REL++ ++H NI
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 120 VPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
+ L+ ++ Q ++L+ + + +L + + + R + L Y++ GI
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLL-----YQMLCGI 132
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
+LH+ ++HRD+KPSNI++ S K+ DFGLA T+ S F+ T
Sbjct: 133 K----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTS--FMMTPYVVTR 182
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMA 294
Y APE + D+++ G ++ E++ + G + + W K I G
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI-----LFPGRDYIDQWNKVIEQLGTP 237
Query: 295 AVEELLDPRLKCTSRN 310
E + +L+ T RN
Sbjct: 238 CPEFM--KKLQPTVRN 251
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 30/256 (11%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + +G GA V +L +VAIK+L + +++ +K REL++ ++H NI
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 120 VPLVGF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
+ L+ ++ Q ++L+ + + +L + + + R + L Y++ GI
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLL-----YQMLCGI 133
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
+LH+ ++HRD+KPSNI++ S K+ DFGLA T+ S F+ T
Sbjct: 134 K----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTS--FMMTPYVVTR 183
Query: 235 GYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMA 294
Y APE + D+++ G ++ E++ + G + + W K I G
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI-----LFPGRDYIDQWNKVIEQLGTP 238
Query: 295 AVEELLDPRLKCTSRN 310
E + +L+ T RN
Sbjct: 239 CPEFM--KKLQPTVRN 252
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
E+ I SL H ++V GF D +F++ + SL LH+++K + T P +
Sbjct: 65 EISIHRSLAHQHVVGFHGFFED-NDFVFVVLELCRRRSL-LELHKRRKAL----TEPEAR 118
Query: 167 RY--KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT--SAPS 222
Y ++ LG YLH V+HRD+K N+ L+ K+ DFGLAT
Sbjct: 119 YYLRQIVLG----CQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 171
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
LC GT Y+APE S + DV++ G ++ LL G+ P E L+
Sbjct: 172 KKVLC----GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 221
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 117/294 (39%), Gaps = 74/294 (25%)
Query: 42 PVANSLIRLSYGEILAATHNFSK-----GRVLGRGALSFVFKGKVGLLRTS-----VAIK 91
P+ RL Y A+ F++ G+ LGRGA V + ++ S VA+K
Sbjct: 7 PLDEQCERLPYD---ASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVK 63
Query: 92 RLDKEDKESS--KAFCRELMIASSL-HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLER- 147
L KE +S KA EL I + + HH N+V L+G C L +I +Y G+L
Sbjct: 64 ML-KEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNY 122
Query: 148 ----------------HLHEKKKGV-----RGNSTLPWSVR------------------- 167
H+ KK+ + +G SV
Sbjct: 123 LKSKRDLFFLNKDAALHMEPKKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDV 182
Query: 168 ---------YKVALGIAESVAY---LHNGTE----RCVVHRDIKPSNILLSSKKIPKLCD 211
YK + + + ++Y + G E R +HRD+ NILLS + K+CD
Sbjct: 183 EEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICD 242
Query: 212 FGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
FGLA + ++APE S K+DV+++GV+L E+ +
Sbjct: 243 FGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 117 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQD-----RGDQAFTEREASEIXKS 169
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLAT-WTSAPSVPFLCKT 229
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A TS S+ C T
Sbjct: 170 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 226
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
Y+APE K D ++ GV+ LL G P
Sbjct: 227 PY----YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFCRELMIASSLHHPN 118
+F +V+GRGA V K+ A+K L+K + K + A RE
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ + + + L+L+ Y GG L L + + + + +A+ +SV
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI---DSV 191
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFG-----LATWTSAPSVPFLCKTVKGT 233
LH VHRDIKP NIL+ +L DFG + T SV GT
Sbjct: 192 HQLH------YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV------GT 239
Query: 234 FGYLAPEYFQ-----HGKVSDKTDVYAFGVVLLELLTGRKPIEARRL 275
Y++PE Q G+ + D ++ GV + E+L G P A L
Sbjct: 240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 286
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 109/225 (48%), Gaps = 15/225 (6%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + +G GA V +L +VAIK+L + +++ +K REL++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 120 VPLVGFCIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ L+ P++ L Y+ ++ +L + + + + + + Y++ GI
Sbjct: 86 IGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK--- 140
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+LH+ ++HRD+KPSNI++ S K+ DFGLA T+ S F+ + T Y A
Sbjct: 141 -HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTS--FMMEPEVVTRYYRA 193
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
PE + D+++ G ++ E++ + R + N V+
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 238
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 113 SLHHPNIVPLVGFC----IDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
+ HPN+V L+ C D E + L++++V L +L + LP
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPP-----PGLPAETIK 123
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ + +LH C+VHRD+KP NIL++S KL DFGLA S
Sbjct: 124 DLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALT 177
Query: 229 TVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
V T Y APE + D+++ G + E+ RKP+
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIV 120
+F + VLG+GA V K + L AIK++ + +E E+ + +SL+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 121 PLVG------------FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
+ + LF+ +Y +L +H + + + +
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY------W 119
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA------------T 216
++ I E+++Y+H+ + ++HR++KP NI + + K+ DFGLA
Sbjct: 120 RLFRQILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 217 WTSAPSVPFLCKTVKGTFGYLAPEYFQ-HGKVSDKTDVYAFGVVLLELL 264
+ P + GT Y+A E G ++K D Y+ G++ E +
Sbjct: 177 SQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
E+ I SL H ++V GF D +F++ + SL LH+++K + T P +
Sbjct: 89 EISIHRSLAHQHVVGFHGFFED-NDFVFVVLELCRRRSL-LELHKRRKAL----TEPEAR 142
Query: 167 RY--KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT--SAPS 222
Y ++ LG YLH V+HRD+K N+ L+ K+ DFGLAT
Sbjct: 143 YYLRQIVLG----CQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 195
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
LC GT Y+APE S + DV++ G ++ LL G+ P E L+
Sbjct: 196 KKVLC----GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 245
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 107 ELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV 166
E+ I SL H ++V GF D +F++ + SL LH+++K + T P +
Sbjct: 91 EISIHRSLAHQHVVGFHGFFED-NDFVFVVLELCRRRSL-LELHKRRKAL----TEPEAR 144
Query: 167 RY--KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWT--SAPS 222
Y ++ LG YLH V+HRD+K N+ L+ K+ DFGLAT
Sbjct: 145 YYLRQIVLG----CQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 197
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
LC GT Y+APE S + DV++ G ++ LL G+ P E L+
Sbjct: 198 KKVLC----GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 247
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 108/225 (48%), Gaps = 15/225 (6%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + +G GA V +L +VAIK+L + +++ +K REL++ ++H NI
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 120 VPLVGFCIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ L+ P++ L Y+ ++ +L + + + + + + Y++ GI
Sbjct: 80 IGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK--- 134
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+LH+ ++HRD+KPSNI++ S K+ DFGLA T+ S F+ T Y A
Sbjct: 135 -HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTS--FMMTPYVVTRYYRA 187
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
PE + D+++ G ++ E++ + R + N V+
Sbjct: 188 PEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 232
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 109/225 (48%), Gaps = 15/225 (6%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + +G GA V +L +VAIK+L + +++ +K REL++ ++H NI
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 120 VPLVGFCIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ L+ P++ L Y+ ++ +L + + + + + + Y++ GI
Sbjct: 86 IGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK--- 140
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+LH+ ++HRD+KPSNI++ S K+ DFGLA T+ S F+ + T Y A
Sbjct: 141 -HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTS--FMMEPEVVTRYYRA 193
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
PE + D+++ G ++ E++ + R + N V+
Sbjct: 194 PEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 238
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 17/222 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFCRELMIASSLHHPN 118
+F +V+GRGA V K+ A+K L+K + K + A RE
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ + + E L+L+ Y GG L L + LP + I E V
Sbjct: 135 WITALHYAFQDENHLYLVMDYYVGGDLLTLLS------KFEDKLPEDM---ARFYIGEMV 185
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+ + + VHRDIKP N+LL +L DFG + GT Y++
Sbjct: 186 LAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYIS 244
Query: 239 PEYFQ-----HGKVSDKTDVYAFGVVLLELLTGRKPIEARRL 275
PE Q GK + D ++ GV + E+L G P A L
Sbjct: 245 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 286
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 54 EILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS 113
E+ ATH LGRG+ V + + A+K++ E + ELM +
Sbjct: 72 EVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA-----EELMACAG 122
Query: 114 LHHPNIVPLVGFCID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
L P IVPL G + P +F+ + + GGSL + + E+ LP R L
Sbjct: 123 LTSPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLVKEQ-------GCLP-EDRALYYL 172
Query: 173 GIA-ESVAYLHNGTERCVVHRDIKPSNILLSSK-KIPKLCDFGLATWTSAPSVP---FLC 227
G A E + YLH+ R ++H D+K N+LLSS LCDFG A +
Sbjct: 173 GQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTG 229
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
+ GT ++APE K DV++ ++L +L G P
Sbjct: 230 DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 66 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 117
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 80
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 174
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 81 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A+ +AYL+ + VHRD+ N +++ K+ DFG+ + K KG
Sbjct: 139 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLL 193
Query: 235 G--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
++APE + G + +D+++FGVVL E+ +
Sbjct: 194 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 66 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 117
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 174
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 82 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A+ +AYL+ + VHRD+ N +++ K+ DFG+ + K KG
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETAYYRKGGKGLL 194
Query: 235 G--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
++APE + G + +D+++FGVVL E+ +
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 66 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 117
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 174
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 82 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A+ +AYL+ + VHRD+ N +++ K+ DFG+ + K KG
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLL 194
Query: 235 G--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
++APE + G + +D+++FGVVL E+ +
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 17/222 (7%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAFCRELMIASSLHHPN 118
+F +V+GRGA V K+ A+K L+K + K + A RE
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ + + E L+L+ Y GG L L + LP + I E V
Sbjct: 151 WITALHYAFQDENHLYLVMDYYVGGDLLTLLS------KFEDKLPEDM---ARFYIGEMV 201
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+ + + VHRDIKP N+LL +L DFG + GT Y++
Sbjct: 202 LAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYIS 260
Query: 239 PEYFQ-----HGKVSDKTDVYAFGVVLLELLTGRKPIEARRL 275
PE Q GK + D ++ GV + E+L G P A L
Sbjct: 261 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 302
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 108/225 (48%), Gaps = 15/225 (6%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNI 119
+ + +G GA V +L +VAIK+L + +++ +K REL++ ++H NI
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 120 VPLVGFCIDPEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
+ L+ P++ L Y+ ++ +L + + + + + + Y++ GI
Sbjct: 91 IGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIK--- 145
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+LH+ ++HRD+KPSNI++ S K+ DFGLA T+ S F+ T Y A
Sbjct: 146 -HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTS--FMMTPYVVTRYYRA 198
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
PE + D+++ G ++ E++ + R + N V+
Sbjct: 199 PEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 243
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 54 EILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS 113
E+ ATH LGRG+ V + + A+K++ E + ELM +
Sbjct: 91 EVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA-----EELMACAG 141
Query: 114 LHHPNIVPLVGFCID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVAL 172
L P IVPL G + P +F+ + + GGSL + + E+ LP R L
Sbjct: 142 LTSPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLVKEQ-------GCLP-EDRALYYL 191
Query: 173 GIA-ESVAYLHNGTERCVVHRDIKPSNILLSSK-KIPKLCDFGLATWTSAPSVP---FLC 227
G A E + YLH+ R ++H D+K N+LLSS LCDFG A +
Sbjct: 192 GQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTG 248
Query: 228 KTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
+ GT ++APE K DV++ ++L +L G P
Sbjct: 249 DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC-----RELMIASSLHHPNIVP 121
V+G+G S V + A+K +D SS RE I L HP+IV
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L+ + L+++++++ G L E K +V I E++ Y
Sbjct: 91 LLE-TYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
H+ ++HRD+KP +LL+SK+ KL FG+A + + GT ++A
Sbjct: 147 HDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--VAGGRVGTPHFMA 201
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
PE + DV+ GV+L LL+G P
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC-----RELMIASSLHHPNIVP 121
V+G+G S V + A+K +D SS RE I L HP+IV
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 122 LVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
L+ + L+++++++ G L E K +V I E++ Y
Sbjct: 93 LLE-TYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIP---KLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
H+ ++HRD+KP +LL+SK+ KL FG+A + + GT ++A
Sbjct: 149 HDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--VAGGRVGTPHFMA 203
Query: 239 PEYFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
PE + DV+ GV+L LL+G P
Sbjct: 204 PEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 14/202 (6%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCI 127
LG G+ V+K VAIK++ E + +E+ I P++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 128 DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
L+++ +Y GS+ + + N TL + + + YLH +
Sbjct: 95 K-NTDLWIVMEYCGAGSVSDIIRLR------NKTLTEDEIATILQSTLKGLEYLHFMRK- 146
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV 247
+HRDIK NILL+++ KL DFG+A + V GT ++APE Q
Sbjct: 147 --IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK--RNXVIGTPFWMAPEVIQEIGY 202
Query: 248 SDKTDVYAFGVVLLELLTGRKP 269
+ D+++ G+ +E+ G+ P
Sbjct: 203 NCVADIWSLGITAIEMAEGKPP 224
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 66 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 117
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 78
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 174
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 79 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A+ +AYL+ + VHRD+ N +++ K+ DFG+ K KG
Sbjct: 137 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLL 191
Query: 235 G--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
++APE + G + +D+++FGVVL E+ +
Sbjct: 192 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 66 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 117
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 174
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 82 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A+ +AYL+ + VHRD+ N +++ K+ DFG+ K KG
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLL 194
Query: 235 G--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
++APE + G + +D+++FGVVL E+ +
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 22/205 (10%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKR--LDKEDKESSKAFCRELMIASSLHHPNIVPLVGF 125
LG G V+K + +VAIKR L+ E++ RE+ + L H NI+ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS- 100
Query: 126 CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGT 185
I L LI++Y ++ KK + N + V + V + H +
Sbjct: 101 VIHHNHRLHLIFEYAE--------NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH--S 150
Query: 186 ERCVVHRDIKPSNILL-----SSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
RC+ HRD+KP N+LL S + K+ DFGLA P F + + T Y PE
Sbjct: 151 RRCL-HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII--TLWYRPPE 207
Query: 241 YFQHGK-VSDKTDVYAFGVVLLELL 264
+ S D+++ + E+L
Sbjct: 208 ILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 66 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 117
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 174
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 82 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A+ +AYL+ + VHRD+ N +++ K+ DFG+ K KG
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLL 194
Query: 235 G--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
++APE + G + +D+++FGVVL E+ +
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 125
+G+G V++GK VA+K ++ S + RE I + L H NI+ +
Sbjct: 12 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIA- 65
Query: 126 CIDPEQG----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
+ + G L+L+ Y GSL +L+ V G K+AL A +A+L
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG--------MIKLALSTASGLAHL 117
Query: 182 HN---GTER--CVVHRDIKPSNILLSSKKIPKLCDFGLATW--TSAPSVPFLCKTVKGTF 234
H GT+ + HRD+K NIL+ + D GLA ++ ++ GT
Sbjct: 118 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 177
Query: 235 GYLAPEYF------QHGKVSDKTDVYAFGVVLLEL 263
Y+APE +H + + D+YA G+V E+
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 125
+G+G V++GK VA+K ++ S + RE I + L H NI+ +
Sbjct: 14 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIA- 67
Query: 126 CIDPEQG----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
+ + G L+L+ Y GSL +L+ V G K+AL A +A+L
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG--------MIKLALSTASGLAHL 119
Query: 182 HN---GTER--CVVHRDIKPSNILLSSKKIPKLCDFGLATW--TSAPSVPFLCKTVKGTF 234
H GT+ + HRD+K NIL+ + D GLA ++ ++ GT
Sbjct: 120 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 179
Query: 235 GYLAPEYF------QHGKVSDKTDVYAFGVVLLEL 263
Y+APE +H + + D+YA G+V E+
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 125
+G+G V++GK VA+K ++ S + RE I + L H NI+ +
Sbjct: 17 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIA- 70
Query: 126 CIDPEQG----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
+ + G L+L+ Y GSL +L+ V G K+AL A +A+L
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG--------MIKLALSTASGLAHL 122
Query: 182 HN---GTER--CVVHRDIKPSNILLSSKKIPKLCDFGLATW--TSAPSVPFLCKTVKGTF 234
H GT+ + HRD+K NIL+ + D GLA ++ ++ GT
Sbjct: 123 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 182
Query: 235 GYLAPEYF------QHGKVSDKTDVYAFGVVLLEL 263
Y+APE +H + + D+YA G+V E+
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 66 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 117
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 174
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 82 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A+ +AYL+ + VHR++ N +++ K+ DFG+ + K KG
Sbjct: 140 ADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLL 194
Query: 235 G--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
++APE + G + +D+++FGVVL E+ +
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 125
+G+G V++GK VA+K ++ S + RE I + L H NI+ +
Sbjct: 11 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIA- 64
Query: 126 CIDPEQG----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
+ + G L+L+ Y GSL +L+ V G K+AL A +A+L
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG--------MIKLALSTASGLAHL 116
Query: 182 HN---GTER--CVVHRDIKPSNILLSSKKIPKLCDFGLATW--TSAPSVPFLCKTVKGTF 234
H GT+ + HRD+K NIL+ + D GLA ++ ++ GT
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176
Query: 235 GYLAPEYF------QHGKVSDKTDVYAFGVVLLEL 263
Y+APE +H + + D+YA G+V E+
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 66 RVLGRGALSFVFKGKV-----GLLRTSVAIKRLDKEDKESSK-AFCRE--LMIASSLHHP 117
R LG+G+ V++G G T VA+K +++ + F E +M + HH
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 82
Query: 118 NIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSV---RYKVALGI 174
+V L+G + Q ++ + ++ G L+ +L + N P ++A I
Sbjct: 83 -VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTF 234
A+ +AYL+ + VHR++ N +++ K+ DFG+ + K KG
Sbjct: 141 ADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLL 195
Query: 235 G--YLAPEYFQHGKVSDKTDVYAFGVVLLELLT 265
++APE + G + +D+++FGVVL E+ +
Sbjct: 196 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 125
+G+G V++GK VA+K ++ S + RE I + L H NI+ +
Sbjct: 37 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIA- 90
Query: 126 CIDPEQG----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
+ + G L+L+ Y GSL +L+ V G K+AL A +A+L
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG--------MIKLALSTASGLAHL 142
Query: 182 HN---GTER--CVVHRDIKPSNILLSSKKIPKLCDFGLATW--TSAPSVPFLCKTVKGTF 234
H GT+ + HRD+K NIL+ + D GLA ++ ++ GT
Sbjct: 143 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 202
Query: 235 GYLAPEYF------QHGKVSDKTDVYAFGVVLLEL 263
Y+APE +H + + D+YA G+V E+
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 125
+G+G V++GK VA+K ++ S + RE I + L H NI+ +
Sbjct: 50 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIA- 103
Query: 126 CIDPEQG----LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYL 181
+ + G L+L+ Y GSL +L+ V G K+AL A +A+L
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG--------MIKLALSTASGLAHL 155
Query: 182 HN---GTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLATW--TSAPSVPFLCKTVKGTF 234
H GT+ + HRD+K NIL+ + D GLA ++ ++ GT
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 215
Query: 235 GYLAPEYF------QHGKVSDKTDVYAFGVVLLEL 263
Y+APE +H + + D+YA G+V E+
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L + +K L + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQ--------ILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA-----TRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 37/247 (14%)
Query: 55 ILAATHNFSKGRVLGRGAL-SFVFKGKVGLLRTSVAIKRLDKE-----DKESSKAFCREL 108
++ +F VLG GA + V++G VA+KR+ E D+E
Sbjct: 19 VIVGKISFCPKDVLGHGAEGTIVYRGMFD--NRDVAVKRILPECFSFADREVQ------- 69
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
++ S HPN++ FC + ++ I + +L+ ++ +K G P ++
Sbjct: 70 LLRESDEHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLE--PITLLQ 125
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLS-----SKKIPKLCDFGLATWTSAPSV 223
+ G+A +LH+ +VHRD+KP NIL+S K + DFGL +
Sbjct: 126 QTTSGLA----HLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178
Query: 224 PFLCKT-VKGTFGYLAPEYFQHGKVSDKT---DVYAFGVVLLELLT-GRKPIEARRLQGE 278
F ++ V GT G++APE + T D+++ G V +++ G P + LQ +
Sbjct: 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF-GKSLQRQ 237
Query: 279 ENLVLWA 285
N++L A
Sbjct: 238 ANILLGA 244
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 106 RELMIASSLHHPNIVPLVGFCIDPE-QGLFLIYKYVSGGSLE--RHLHEKKKGVRGNSTL 162
+E+ + L H N++ LV + E Q ++++ +Y G E + EK+
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR--------F 106
Query: 163 PWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS 222
P + + + + YLH+ + +VH+DIKP N+LL++ K+ G+A +
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 223 VPFLCKTVKGTFGYLAPEYFQHGKVSD--KTDVYAFGVVLLELLTGRKPIEARRL 275
C+T +G+ + PE K D+++ GV L + TG P E +
Sbjct: 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI 218
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 42 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 97
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 98 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 149
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 150 AD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 201
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 41 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 96
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 97 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 148
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 149 AD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 200
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 47 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 102
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 103 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 154
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 155 AD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA-----TRWYRAPEIML 206
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 38 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 93
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 94 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 145
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 146 AD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 197
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 41 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 96
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 97 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 148
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 149 AD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 200
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 64 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 114
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 26 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 84
Query: 115 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 85 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 135
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + + GT
Sbjct: 136 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGT 191
Query: 234 FGYLAPEYFQHGKVSDKT-----------DVYAFGVVLLELLTGRKPIE 271
Y+ PE + S + DV++ G +L + G+ P +
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 64 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 114
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 54 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 112
Query: 115 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 113 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 163
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + + GT
Sbjct: 164 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 234 FGYLAPEYFQHGKVSDKT-----------DVYAFGVVLLELLTGRKPIE 271
Y+ PE + S + DV++ G +L + G+ P +
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L K + +K REL + + H N++ L+
Sbjct: 48 GSVCAAFDTKTGL---RVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 103
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 104 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 155
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 156 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 207
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L + +K L + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQ--------ILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 64 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 114
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 6 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 64
Query: 115 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 65 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 115
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + + GT
Sbjct: 116 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGT 171
Query: 234 FGYLAPEYFQHGKVSDKT-----------DVYAFGVVLLELLTGRKPIE 271
Y+ PE + S + DV++ G +L + G+ P +
Sbjct: 172 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 220
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 64 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 114
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 10 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 68
Query: 115 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 69 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 119
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + + GT
Sbjct: 120 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGT 175
Query: 234 FGYLAPEYFQHGKVSDKT-----------DVYAFGVVLLELLTGRKPIE 271
Y+ PE + S + DV++ G +L + G+ P +
Sbjct: 176 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 224
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA---FCREL 108
A N+ + LG G+ GKV L + VA+K ++K+ S RE+
Sbjct: 1 AHIGNYQIVKTLGEGSF-----GKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI 55
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
L HP+I+ L I + + ++ +Y +G L ++ ++ K +
Sbjct: 56 SYLRLLRHPHIIKLYD-VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR------- 106
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ I +V Y H +VHRD+KP N+LL K+ DFGL+ + + K
Sbjct: 107 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLK 160
Query: 229 TVKGTFGYLAPEYFQHGKV--SDKTDVYAFGVVLLELLTGRKPIE 271
T G+ Y APE GK+ + DV++ GV+L +L R P +
Sbjct: 161 TSCGSPNYAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF-CRELMIASSLHHPNIVPLVGFC 126
LGRG+ V + K A+K++ E F EL+ + L P IVPL G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLE------VFRVEELVACAGLSSPRIVPLYGAV 133
Query: 127 ID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA-ESVAYLHNG 184
+ P +F+ + + GGSL + + + LP R LG A E + YLH
Sbjct: 134 REGPWVNIFM--ELLEGGSLGQLIKQM-------GCLP-EDRALYYLGQALEGLEYLHT- 182
Query: 185 TERCVVHRDIKPSNILLSSK-KIPKLCDFGLATWTSAPSVP---FLCKTVKGTFGYLAPE 240
R ++H D+K N+LLSS LCDFG A + + GT ++APE
Sbjct: 183 --RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 240
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
K D+++ ++L +L G P
Sbjct: 241 VVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKE---DKESSKAFCREL 108
A N+ + LG G+ GKV L + VA+K ++K+ + RE+
Sbjct: 11 AHIGNYQIVKTLGEGSF-----GKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI 65
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
L HP+I+ L I + + ++ +Y +G L ++ ++ K +
Sbjct: 66 SYLRLLRHPHIIKLYD-VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR------- 116
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ I +V Y H +VHRD+KP N+LL K+ DFGL+ + + K
Sbjct: 117 RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLK 170
Query: 229 TVKGTFGYLAPEYFQHGKV--SDKTDVYAFGVVLLELLTGRKPIE 271
T G+ Y APE GK+ + DV++ GV+L +L R P +
Sbjct: 171 TSCGSPNYAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 64 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 114
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 7 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 65
Query: 115 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 66 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 116
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + + GT
Sbjct: 117 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGT 172
Query: 234 FGYLAPEYFQHGKVSDKT-----------DVYAFGVVLLELLTGRKPIE 271
Y+ PE + S + DV++ G +L + G+ P +
Sbjct: 173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 221
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 64 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 114
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 54 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 112
Query: 115 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 113 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 163
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + + GT
Sbjct: 164 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 234 FGYLAPEYFQHGKVSDKT-----------DVYAFGVVLLELLTGRKPIE 271
Y+ PE + S + DV++ G +L + G+ P +
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 43 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 98
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 99 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 150
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T+ ++ T Y APE
Sbjct: 151 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV-----ATRWYRAPEIML 202
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKEDKESSKA---FCREL 108
A N+ + LG G+ GKV L + VA+K ++K+ S RE+
Sbjct: 5 AHIGNYQIVKTLGEGSF-----GKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI 59
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
L HP+I+ L I + + ++ +Y +G L ++ ++ K +
Sbjct: 60 SYLRLLRHPHIIKLYD-VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR------- 110
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ I +V Y H +VHRD+KP N+LL K+ DFGL+ + + K
Sbjct: 111 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLK 164
Query: 229 TVKGTFGYLAPEYFQHGKV--SDKTDVYAFGVVLLELLTGRKPIE 271
T G+ Y APE GK+ + DV++ GV+L +L R P +
Sbjct: 165 TSCGSPNYAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTS-----VAIKRLDKE---DKESSKAFCREL 108
A N+ + LG G+ GKV L + VA+K ++K+ + RE+
Sbjct: 10 AHIGNYQIVKTLGEGSF-----GKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI 64
Query: 109 MIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRY 168
L HP+I+ L I + + ++ +Y +G L ++ ++ K +
Sbjct: 65 SYLRLLRHPHIIKLYD-VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR------- 115
Query: 169 KVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCK 228
+ I +V Y H +VHRD+KP N+LL K+ DFGL+ + + K
Sbjct: 116 RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLK 169
Query: 229 TVKGTFGYLAPEYFQHGKV--SDKTDVYAFGVVLLELLTGRKPIE 271
T G+ Y APE GK+ + DV++ GV+L +L R P +
Sbjct: 170 TSCGSPNYAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 43 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 98
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 99 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 150
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T+ ++ T Y APE
Sbjct: 151 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV-----ATRWYRAPEIML 202
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L + +K L + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQ--------ILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGL T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 43 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 98
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 99 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 150
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T+ ++ T Y APE
Sbjct: 151 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV-----ATRWYRAPEIML 202
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 42 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 97
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 98 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 149
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 150 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 201
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 42 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 97
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 98 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 149
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 150 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 201
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 41 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 96
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 97 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 148
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 149 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 200
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 35 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 90
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 91 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 142
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 143 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 194
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 195 NWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 88 VAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL 145
VAIK+L + + + +K REL++ + H N++ L+ P L Y +
Sbjct: 52 VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPF 110
Query: 146 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 205
+ +K G++ + + Y++ G+ Y+H+ VVHRD+KP N+ ++
Sbjct: 111 MQTDLQKIMGLKFSEEKIQYLVYQMLKGLK----YIHSA---GVVHRDLKPGNLAVNEDC 163
Query: 206 IPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELL 264
K+ DFGLA A ++ T Y APE ++T D+++ G ++ E+L
Sbjct: 164 ELKILDFGLARHADAEMTGYVV-----TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 218
Query: 265 TGR 267
TG+
Sbjct: 219 TGK 221
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 43 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 98
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 99 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 150
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 151 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 202
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 48 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 103
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 104 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 155
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 156 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 207
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 48 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 103
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 104 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 155
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 156 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 207
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 38 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 93
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 94 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 145
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 146 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 197
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 47 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 102
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 103 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 154
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 155 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 206
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 38 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 93
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 94 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 145
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 146 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 197
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 41 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 96
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 97 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 148
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 149 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 200
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 38 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 93
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 94 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 145
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 146 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 197
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 59 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 114
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 115 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 166
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 167 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 218
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 68/288 (23%)
Query: 57 AATHNFSKGRVLGRGALSFV---FKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS 113
++ +S G+ LG G+ V F + G A+K++ ++ + + REL I
Sbjct: 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESG---KRFALKKVLQDPRYKN----RELDIMKV 56
Query: 114 LHHPNIVPLVGF-----------------------------------CIDPEQGLFL--I 136
L H NI+ LV + ++P Q +L I
Sbjct: 57 LDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVI 116
Query: 137 YKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKP 196
+YV +L + L K +R ++P ++ + +V ++H+ + HRDIKP
Sbjct: 117 MEYVPD-TLHKVL---KSFIRSGRSIPMNLISIYIYQLFRAVGFIHS---LGICHRDIKP 169
Query: 197 SNILLSSK-KIPKLCDFGLAT--WTSAPSVPFLCKTVKGTFGYLAPEYFQHG-KVSDKTD 252
N+L++SK KLCDFG A S PSV +C Y APE + + D
Sbjct: 170 QNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRF-----YRAPELMLGATEYTPSID 224
Query: 253 VYAFGVVLLELLTGRKPIEARRLQGEENLVLWAKPILHRGMAAVEELL 300
+++ G V EL+ G KP+ GE ++ + I G E+++
Sbjct: 225 LWSIGCVFGELILG-KPL----FSGETSIDQLVRIIQIMGTPTKEQMI 267
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 55 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 110
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 111 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 162
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 163 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 214
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 56 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 111
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 112 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 163
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 164 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 215
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 33 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 88
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 89 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 140
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 141 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 192
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 33 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 88
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 89 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 140
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 141 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 192
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 32 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 87
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 88 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 139
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 191
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 34 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 89
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 90 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 141
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 142 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 193
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 64 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 114
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 26 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 84
Query: 115 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 85 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 135
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + GT
Sbjct: 136 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGT 191
Query: 234 FGYLAPEYFQHGKVSDKT-----------DVYAFGVVLLELLTGRKPIE 271
Y+ PE + S + DV++ G +L + G+ P +
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 59 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 114
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 115 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 166
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 167 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV-----ATRWYRAPEIML 218
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF-CRELMIASSLHHPNIVPLVGFC 126
+GRG+ V + K A+K++ E F EL+ + L P IVPL G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE------VFRVEELVACAGLSSPRIVPLYGAV 135
Query: 127 ID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA-ESVAYLHNG 184
+ P +F+ + + GGSL + ++ LP R LG A E + YLH
Sbjct: 136 REGPWVNIFM--ELLEGGSLGQL-------IKQMGCLP-EDRALYYLGQALEGLEYLHT- 184
Query: 185 TERCVVHRDIKPSNILLSSK-KIPKLCDFGLATWTSAPSVP---FLCKTVKGTFGYLAPE 240
R ++H D+K N+LLSS LCDFG A + + GT ++APE
Sbjct: 185 --RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 242
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
K D+++ ++L +L G P
Sbjct: 243 VVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAF-CRELMIASSLHHPNIVPLVGFC 126
+GRG+ V + K A+K++ E F EL+ + L P IVPL G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE------VFRVEELVACAGLSSPRIVPLYGAV 119
Query: 127 ID-PEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIA-ESVAYLHNG 184
+ P +F+ + + GGSL + + + LP R LG A E + YLH
Sbjct: 120 REGPWVNIFM--ELLEGGSLGQLIKQM-------GCLP-EDRALYYLGQALEGLEYLHT- 168
Query: 185 TERCVVHRDIKPSNILLSSK-KIPKLCDFGLATWTSAPSVP---FLCKTVKGTFGYLAPE 240
R ++H D+K N+LLSS LCDFG A + + GT ++APE
Sbjct: 169 --RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 226
Query: 241 YFQHGKVSDKTDVYAFGVVLLELLTGRKP 269
K D+++ ++L +L G P
Sbjct: 227 VVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Query: 88 VAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL 145
VAIK+L + + + +K REL++ + H N++ L+ P L Y +
Sbjct: 70 VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPF 128
Query: 146 ERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK 205
+ +K G+ + + Y++ G+ Y+H+ VVHRD+KP N+ ++
Sbjct: 129 MQTDLQKIMGMEFSEEKIQYLVYQMLKGLK----YIHSA---GVVHRDLKPGNLAVNEDC 181
Query: 206 IPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELL 264
K+ DFGLA A ++ T Y APE ++T D+++ G ++ E+L
Sbjct: 182 ELKILDFGLARHADAEMTGYVV-----TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 236
Query: 265 TGR 267
TG+
Sbjct: 237 TGK 239
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 57 AATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--L 114
H + +G+G V++G +VA+K D+ K++ RE + ++ L
Sbjct: 5 TVAHQITLLECVGKGRYGEVWRG--SWQGENVAVKIFSSRDE---KSWFRETELYNTVML 59
Query: 115 HHPNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVA 171
H NI+ + + L+LI Y GSL +L +TL ++
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL--------TTLDTVSCLRIV 111
Query: 172 LGIAESVAYLH---NGTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFL 226
L IA +A+LH GT+ + HRD+K NIL+ + D GLA S +
Sbjct: 112 LSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLD 171
Query: 227 CKTVK--GTFGYLAPEYFQHGKVSD------KTDVYAFGVVLLEL 263
GT Y+APE D + D++AFG+VL E+
Sbjct: 172 VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T F+ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T F+ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 31/214 (14%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 125
+G+G V++G SVA+K D++S + RE I ++ L H NI+ +
Sbjct: 16 VGKGRYGEVWRGL--WHGESVAVKIFSSRDEQS---WFRETEIYNTVLLRHDNILGFIAS 70
Query: 126 CI---DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+ + L+LI Y GSL L + TL + ++A+ A +A+LH
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQ--------TLEPHLALRLAVSAACGLAHLH 122
Query: 183 ---NGTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPS--VPFLCKTVKGTFG 235
GT+ + HRD K N+L+ S + D GLA S S + GT
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKR 182
Query: 236 YLAPEYFQHGKVSD------KTDVYAFGVVLLEL 263
Y+APE +D TD++AFG+VL E+
Sbjct: 183 YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLV 123
R +G GA V LR VA+K+L + + ++ REL + L H N++ L+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 124 GF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
I+ ++L+ + G L V+ + V++ V + +
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM-GADL-------NNIVKSQALSDEHVQFLV-YQLLRGL 144
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
Y+H+ ++HRD+KPSN+ ++ ++ DFGLA ++ T Y A
Sbjct: 145 KYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVA-----TRWYRA 196
Query: 239 PEYFQHGKVSDKT-DVYAFGVVLLELLTGR 267
PE + ++T D+++ G ++ ELL G+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ D+GLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 32 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 87
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 88 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 139
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T F+ T Y APE
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV-----ATRWYRAPEIML 191
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 64 KGRV------LGRGALSFVFKGKVGLLRTSVAIK--RLDKEDKESSKAFCRELMIASSL- 114
KGR+ +G G S VF+ + + AIK L++ D ++ ++ E+ + L
Sbjct: 54 KGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 112
Query: 115 -HHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
H I+ L + I + IY + G+++ + KKK S PW R
Sbjct: 113 QHSDKIIRLYDYEITDQ----YIYMVMECGNIDLNSWLKKK----KSIDPWE-RKSYWKN 163
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
+ E+V +H + +VH D+KP+N L+ + KL DFG+A + + + G
Sbjct: 164 MLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGA 219
Query: 234 FGYLAPEYFQHGKVSDKT-----------DVYAFGVVLLELLTGRKPIE 271
Y+ PE + S + DV++ G +L + G+ P +
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 31/214 (14%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 125
+G+G V++G +VA+K D+ K++ RE + ++ L H NI+ +
Sbjct: 16 VGKGRYGEVWRG--SWQGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIAS 70
Query: 126 CIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+ L+LI Y GSL +L +TL ++ L IA +A+LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQL--------TTLDTVSCLRIVLSIASGLAHLH 122
Query: 183 ---NGTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK--GTFG 235
GT+ + HRD+K NIL+ + D GLA S + GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 236 YLAPEYFQHGKVSD------KTDVYAFGVVLLEL 263
Y+APE D + D++AFG+VL E+
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 96/235 (40%), Gaps = 21/235 (8%)
Query: 47 LIRLSYGEILAATHNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKED--KESSKAF 104
++RL E+ +F +V+GRGA S V K+ A+K ++K D K +
Sbjct: 50 VVRLK--EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSC 107
Query: 105 CRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPW 164
RE + + F E L+L+ +Y GG L L K G R + +
Sbjct: 108 FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLL--SKFGERIPAEM-- 163
Query: 165 SVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVP 224
R+ +AE V + + VHRDIKP NILL +L DFG A
Sbjct: 164 -ARFY----LAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218
Query: 225 FLCKTVKGTFGYLAPEYFQ-------HGKVSDKTDVYAFGVVLLELLTGRKPIEA 272
V GT YL+PE Q G + D +A GV E+ G+ P A
Sbjct: 219 RSLVAV-GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA 272
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 29/225 (12%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE-SSKAFCRELMIASSLHHPNI 119
+F +LG GA V VAIK+++ DK + RE+ I H NI
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 120 VPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVA 179
+ + P+ Y+ ++ LH + + ++Y + + +V
Sbjct: 72 ITIFNIQ-RPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTL-RAVK 126
Query: 180 YLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA-------------TWTSAPSVPFL 226
LH V+HRD+KPSN+L++S K+CDFGLA T + V F+
Sbjct: 127 VLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV 183
Query: 227 CKTVKGTFGYLAPE-YFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
T Y APE K S DV++ G +L EL R+PI
Sbjct: 184 -----ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 42 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 97
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 98 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 149
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 150 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 201
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 96/231 (41%), Gaps = 31/231 (13%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPLVGF 125
+LG+GA + VF+G+ AIK + RE + L+H NIV L F
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL--F 73
Query: 126 CIDPEQGL---FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
I+ E LI ++ GSL L E LP S + + + + V ++
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY----GLPES---EFLIVLRDVVGGMN 126
Query: 183 NGTERCVVHRDIKPSNILL----SSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+ E +VHR+IKP NI+ + + KL DFG A F+ ++ GT YL
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE-QFV--SLYGTEEYLH 183
Query: 239 PEYFQHG--------KVSDKTDVYAFGVVLLELLTGR---KPIEARRLQGE 278
P+ ++ K D+++ GV TG +P E R E
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE 234
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 31/214 (14%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS--LHHPNIVPLVGF 125
+G+G V++G +VA+K D+ K++ RE + ++ L H NI+ +
Sbjct: 45 VGKGRYGEVWRG--SWQGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIAS 99
Query: 126 CIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
+ L+LI Y GSL +L +TL ++ L IA +A+LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQL--------TTLDTVSCLRIVLSIASGLAHLH 151
Query: 183 ---NGTE--RCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK--GTFG 235
GT+ + HRD+K NIL+ + D GLA S + GT
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 211
Query: 236 YLAPEYFQHGKVSD------KTDVYAFGVVLLEL 263
Y+APE D + D++AFG+VL E+
Sbjct: 212 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T + T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 46 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 101
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 102 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 153
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 154 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 205
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 206 NWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 19/220 (8%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE-SSKAFCRELMIASSLHHPNI 119
+F +LG GA V VAIK+++ DK + RE+ I H NI
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 120 VPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVA 179
+ + P+ Y+ ++ LH + + ++Y + + +V
Sbjct: 72 ITIFNIQ-RPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTL-RAVK 126
Query: 180 YLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK-------- 231
LH V+HRD+KPSN+L++S K+CDFGLA + T +
Sbjct: 127 VLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV 183
Query: 232 GTFGYLAPE-YFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
T Y APE K S DV++ G +L EL R+PI
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 56 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 111
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 112 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 163
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 164 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 215
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 19/220 (8%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE-SSKAFCRELMIASSLHHPNI 119
+F +LG GA V VAIK+++ DK + RE+ I H NI
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 120 VPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVA 179
+ + P+ Y+ ++ LH + + ++Y + + +V
Sbjct: 72 ITIFNIQ-RPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTL-RAVK 126
Query: 180 YLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVK-------- 231
LH V+HRD+KPSN+L++S K+CDFGLA + T +
Sbjct: 127 VLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYV 183
Query: 232 GTFGYLAPE-YFQHGKVSDKTDVYAFGVVLLELLTGRKPI 270
T Y APE K S DV++ G +L EL R+PI
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 55 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 110
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 111 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 162
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 163 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 214
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 20/170 (11%)
Query: 102 KAFCRELMIASSLHHPNIVPLVGFCIDPEQ----GLFLIYKYVSGGSLERHLHEKKKGVR 157
K RE+ + + HHPNI+ L + E+ L+L+ + + L + +H+++ +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVIS 132
Query: 158 GNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 217
+ Y + LG LH E VVHRD+ P NILL+ +CDF LA
Sbjct: 133 PQHIQYFM--YHILLG-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 218 TSAPSVPFLCKTVKGTFG-YLAPEYFQHGKVSDK-TDVYAFGVVLLELLT 265
+A + KT T Y APE K K D+++ G V+ E+
Sbjct: 184 DTADA----NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLV 123
R +G GA V LR VA+K+L + + ++ REL + L H N++ L+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 124 GF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
I+ ++L+ + G L V+ + V++ V + +
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM-GADL-------NNIVKCQALSDEHVQFLV-YQLLRGL 144
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
Y+H+ ++HRD+KPSN+ ++ ++ DFGLA ++ T Y A
Sbjct: 145 KYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVA-----TRWYRA 196
Query: 239 PEYFQHGKVSDKT-DVYAFGVVLLELLTGR 267
PE + ++T D+++ G ++ ELL G+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 46/220 (20%)
Query: 90 IKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHL 149
I++++ +D E K E+ + LHHPNI L D EQ + L+ + GG L L
Sbjct: 64 IRQINPKDVERIKT---EVRLMKKLHHPNIARLYEVYED-EQYICLVMELCHGGHLLDKL 119
Query: 150 HE------------------------KKKGVRGN-----STLPWSVRYKVALGIAESV-- 178
+ ++ + G+ +L + R K+ I +
Sbjct: 120 NVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179
Query: 179 --AYLHNGTERCVVHRDIKPSNILLSSKKI--PKLCDFGLAT-WTSAPSVPFLCKTVK-G 232
YLHN + + HRDIKP N L S+ K KL DFGL+ + + + T K G
Sbjct: 180 ALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAG 236
Query: 233 TFGYLAPEYFQHGKVS--DKTDVYAFGVVLLELLTGRKPI 270
T ++APE S K D ++ GV+L LL G P
Sbjct: 237 TPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 99/237 (41%), Gaps = 33/237 (13%)
Query: 116 HPNIVPLVGFCI------DPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
HP+IV + F DP +++ +YV G SL+R +K LP +
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVG--YIVMEYVGGQSLKRSKGQK---------LPVAEAIA 186
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT 229
L I +++YLH+ +V+ D+KP NI+L+ +++ KL D G + ++
Sbjct: 187 YLLEILPALSYLHS---IGLVYNDLKPENIMLTEEQL-KLIDLGAVSRINS------FGY 236
Query: 230 VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQG--EENLVLWAKP 287
+ GT G+ APE + G TD+Y G L L R + G E++ VL
Sbjct: 237 LYGTPGFQAPEIVRTGPTV-ATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYD 295
Query: 288 ILHRGM-AAVEELLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEEIIAILR 343
R + A++ DPR + T+ RPG+ I + R
Sbjct: 296 SYGRLLRRAIDP--DPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRPGLSTIFSPSR 350
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 20/170 (11%)
Query: 102 KAFCRELMIASSLHHPNIVPLVGFCIDPEQ----GLFLIYKYVSGGSLERHLHEKKKGVR 157
K RE+ + + HHPNI+ L + E+ L+L+ + + L + +H+++ +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVIS 132
Query: 158 GNSTLPWSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW 217
+ Y + LG LH E VVHRD+ P NILL+ +CDF LA
Sbjct: 133 PQHIQYFM--YHILLG-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 218 TSAPSVPFLCKTVKGTFG-YLAPEYFQHGKVSDK-TDVYAFGVVLLELLT 265
+A + KT T Y APE K K D+++ G V+ E+
Sbjct: 184 DTADA----NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 95/231 (41%), Gaps = 31/231 (13%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDK-EDKESSKAFCRELMIASSLHHPNIVPLVGF 125
+LG+GA + VF+G+ AIK + RE + L+H NIV L F
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL--F 73
Query: 126 CIDPEQGL---FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLH 182
I+ E LI ++ GSL L E LP S + + + + V ++
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY----GLPES---EFLIVLRDVVGGMN 126
Query: 183 NGTERCVVHRDIKPSNILL----SSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
+ E +VHR+IKP NI+ + + KL DFG A F+ + GT YL
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE-QFV--XLYGTEEYLH 183
Query: 239 PEYFQHG--------KVSDKTDVYAFGVVLLELLTGR---KPIEARRLQGE 278
P+ ++ K D+++ GV TG +P E R E
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE 234
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 32 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 87
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 88 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 139
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIML 191
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPN 118
N+ ++GRG+ +V+ +VAIK++++ ED K RE+ I + L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 119 IVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEK-KKGVRGNSTLPWSVRYKVALGIAES 177
I+ L I PE L Y+ + L + K + ++ Y + LG
Sbjct: 89 IIRLHDLII-PEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLG---- 143
Query: 178 VAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 215
++H E ++HRD+KP+N LL+ K+CDFGLA
Sbjct: 144 EKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 20/201 (9%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 32 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 87
Query: 129 PEQGLFLIYK-YVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTER 187
P + L Y+ + L+ K + + Y++ G+ Y+H+
Sbjct: 88 PARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLK----YIHSAD-- 141
Query: 188 CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKV 247
++HRD+KPSN+ ++ K+ DFGLA T ++ T Y APE +
Sbjct: 142 -IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNWMH 195
Query: 248 SDKT-DVYAFGVVLLELLTGR 267
++T D+++ G ++ ELLTGR
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ D GLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ FGLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 40/161 (24%)
Query: 117 PNIVPLVGFCIDPEQG---LFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALG 173
P+IV +V + G L ++ + + GG L + + RG+ ++
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-----RGDQAFTEREASEIMKS 125
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKK---IPKLCDFGLATWTSAPSVPFLCKTV 230
I E++ YLH+ + HRD+KP N+L +SK+ I KL DFG A T+
Sbjct: 126 IGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT----------- 171
Query: 231 KGTFGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGRKPI 270
G+ DK+ D+++ GV++ LL G P
Sbjct: 172 --------------GEKYDKSCDMWSLGVIMYILLCGYPPF 198
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ D GLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 66 RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLV 123
R +G GA V LR VA+K+L + + ++ REL + L H N++ L+
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 124 GF-----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESV 178
I+ ++L+ + G L V+ + V++ V + +
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLM-GADL-------NNIVKCQALSDEHVQFLV-YQLLRGL 136
Query: 179 AYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLA 238
Y+H+ ++HRD+KPSN+ ++ ++ DFGLA ++ T Y A
Sbjct: 137 KYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYV-----ATRWYRA 188
Query: 239 PEYFQHGKVSDKT-DVYAFGVVLLELLTGR 267
PE + ++T D+++ G ++ ELL G+
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 130 EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNGTERCV 189
E G+ + + G SL++H ++LP + + ++A+LH+ + +
Sbjct: 128 EGGILYLQTELCGPSLQQHCEAW------GASLPEAQVWGYLRDTLLALAHLHS---QGL 178
Query: 190 VHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSD 249
VH D+KP+NI L + KL DFGL + +G Y+APE Q G
Sbjct: 179 VHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA---GEVQEGDPRYMAPELLQ-GSYGT 234
Query: 250 KTDVYAFGVVLLEL 263
DV++ G+ +LE+
Sbjct: 235 AADVFSLGLTILEV 248
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K GL VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTGL---RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ D GLA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVG 124
+G GA V + L VAIK++ + ++K REL I H NI+ +
Sbjct: 61 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 120
Query: 125 FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS---VRYKVALGIAESVAYL 181
YV +E LH+ +S+ P + VRY + + + Y+
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQII-----HSSQPLTLEHVRYFL-YQLLRGLKYM 174
Query: 182 HNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW--TSAPSVPFLCKTVKGTFGYLAP 239
H+ V+HRD+KPSN+L++ K+ DFG+A TS + T Y AP
Sbjct: 175 HSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231
Query: 240 E-YFQHGKVSDKTDVYAFGVVLLELLTGRK 268
E + + D+++ G + E+L R+
Sbjct: 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIV---- 120
+G GA V + L VAIK++ + ++K REL I H NI+
Sbjct: 62 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 121
Query: 121 ---PLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS---VRYKVALGI 174
P V + G F YV +E LH+ +S+ P + VRY + +
Sbjct: 122 ILRPTVPY------GEFKSV-YVVLDLMESDLHQII-----HSSQPLTLEHVRYFL-YQL 168
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATW--TSAPSVPFLCKTVKG 232
+ Y+H+ V+HRD+KPSN+L++ K+ DFG+A TS +
Sbjct: 169 LRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 233 TFGYLAPE-YFQHGKVSDKTDVYAFGVVLLELLTGRK 268
T Y APE + + D+++ G + E+L R+
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 19/175 (10%)
Query: 106 RELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWS 165
+E+ I + H NI+ L + + L +I++++SG + + S +
Sbjct: 50 KEISILNIARHRNILHLHE-SFESMEELVMIFEFISGLDIFERI--------NTSAFELN 100
Query: 166 VRYKVAL--GIAESVAYLHNGTERCVVHRDIKPSNILLSSKK--IPKLCDFGLATWTSAP 221
R V+ + E++ +LH+ + H DI+P NI+ +++ K+ +FG A P
Sbjct: 101 EREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK-P 156
Query: 222 SVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQ 276
F + + Y APE QH VS TD+++ G ++ LL+G P A Q
Sbjct: 157 GDNF--RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 28/224 (12%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE-----DKESSKAFCRELM-----I 110
+ G +LG+G VF G R VAIK + + S C + +
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 111 ASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKV 170
+ HP ++ L+ + E + ++ + + L ++ EK G S +
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPS--------RC 143
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGL-ATWTSAPSVPFLCK 228
G + VA + + R VVHRDIK NIL+ ++ KL DFG A P F
Sbjct: 144 FFG--QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDF--- 198
Query: 229 TVKGTFGYLAPEYF-QHGKVSDKTDVYAFGVVLLELLTGRKPIE 271
GT Y PE+ +H + V++ G++L +++ G P E
Sbjct: 199 --DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 89/224 (39%), Gaps = 40/224 (17%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMI--ASSLHHPNIVPLV- 123
++GRG V+KG L VA+K ++++ F E I + H NI +
Sbjct: 20 LIGRGRYGAVYKG--SLDERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIV 74
Query: 124 ---GFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
D L+ +Y GSL ++L T W ++A + +AY
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL--------SLHTSDWVSSCRLAHSVTRGLAY 126
Query: 181 LHNGTER------CVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSV------PFLCK 228
LH R + HRD+ N+L+ + + DFGL+ + +
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186
Query: 229 TVKGTFGYLAPEYFQHGKVS--------DKTDVYAFGVVLLELL 264
+ GT Y+APE + G V+ + D+YA G++ E+
Sbjct: 187 SEVGTIRYMAPEVLE-GAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC--RELMIASSLHHPNI 119
+ K +G+G VFK + VA+K++ E+++ RE+ I L H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 120 VPLVGFC---IDP----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR--YKV 170
V L+ C P + ++L++ + E L G+ N + +++ +V
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFC-----EHDL----AGLLSNVLVKFTLSEIKRV 130
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP--SVPFLCK 228
+ + Y+H ++HRD+K +N+L++ + KL DFGLA S S P
Sbjct: 131 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 229 TVKGTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGRKPI 270
T Y PE + D++ G ++ E+ T R PI
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 56 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 111
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 112 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 163
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DFGLA T + T Y APE
Sbjct: 164 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXV-----ATRWYRAPEIML 215
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 174 IAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGT 233
I + Y+H+ ++HRD+KPSN+ ++ K+ DFGLA T ++ T
Sbjct: 163 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----AT 214
Query: 234 FGYLAPEYFQHGKVSDKT-DVYAFGVVLLELLTGR 267
Y APE + + T D+++ G ++ ELLTGR
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 86/222 (38%), Gaps = 24/222 (10%)
Query: 59 THNFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKE---------DKESSKAFCRELM 109
+ +S LG GA FV+ V +K + KE D + K E+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKV-TLEIA 81
Query: 110 IASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYK 169
I S + H NI+ ++ I QG F + G L+ + + R
Sbjct: 82 ILSRVEHANIIKVLD--IFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL 139
Query: 170 VALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKT 229
V+ +V YL + ++HRDIK NI+++ KL DFG A + L T
Sbjct: 140 VS-----AVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK---LFYT 188
Query: 230 VKGTFGYLAPEYFQHGKV-SDKTDVYAFGVVLLELLTGRKPI 270
GT Y APE + ++++ GV L L+ P
Sbjct: 189 FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 61 NFSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPN 118
N+ ++GRG+ +V+ +VAIK++++ ED K RE+ I + L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 119 IVPLVGFCIDPE----QGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGI 174
I+ L I + L+++ + ++ L++ K + ++ Y + LG
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLF---KTPIFLTEEHIKTILYNLLLG- 141
Query: 175 AESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLA 215
++H E ++HRD+KP+N LL+ K+CDFGLA
Sbjct: 142 ---ENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 68 LGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVGF 125
+G GA V G VAIK+L + + + +K REL + + H N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 126 -----CIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAY 180
+D +L+ ++ + HEK G + + V Y++ G+ Y
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK----LGEDRIQFLV-YQMLKGLR----Y 143
Query: 181 LHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPE 240
+H ++HRD+KP N+ ++ K+ DFGLA + + T Y APE
Sbjct: 144 IHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV-----TRWYRAPE 195
Query: 241 YFQHG-KVSDKTDVYAFGVVLLELLTGR 267
+ + + D+++ G ++ E++TG+
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC--RELMIASSLHHPNI 119
+ K +G+G VFK + VA+K++ E+++ RE+ I L H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 120 VPLVGFC---IDP----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR--YKV 170
V L+ C P + ++L++ + E L G+ N + +++ +V
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFC-----EHDL----AGLLSNVLVKFTLSEIKRV 130
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP--SVPFLCK 228
+ + Y+H ++HRD+K +N+L++ + KL DFGLA S S P
Sbjct: 131 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 229 TVKGTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGRKPI 270
T Y PE + D++ G ++ E+ T R PI
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC--RELMIASSLHHPNI 119
+ K +G+G VFK + VA+K++ E+++ RE+ I L H N+
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 120 VPLVGFC---IDP----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR--YKV 170
V L+ C P + ++L++ + E L G+ N + +++ +V
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFC-----EHDL----AGLLSNVLVKFTLSEIKRV 129
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP--SVPFLCK 228
+ + Y+H ++HRD+K +N+L++ + KL DFGLA S S P
Sbjct: 130 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 229 TVKGTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGRKPI 270
T Y PE + D++ G ++ E+ T R PI
Sbjct: 187 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 62 FSKGRVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFC--RELMIASSLHHPNI 119
+ K +G+G VFK + VA+K++ E+++ RE+ I L H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 120 VPLVGFC---IDP----EQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVR--YKV 170
V L+ C P + ++L++ + E L G+ N + +++ +V
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFC-----EHDL----AGLLSNVLVKFTLSEIKRV 130
Query: 171 ALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP--SVPFLCK 228
+ + Y+H ++HRD+K +N+L++ + KL DFGLA S S P
Sbjct: 131 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 229 TVKGTFGYLAPEYFQHGK-VSDKTDVYAFGVVLLELLTGRKPI 270
T Y PE + D++ G ++ E+ T R PI
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 71 GALSFVFKGKVGLLRTSVAIKRLDKEDKE--SSKAFCRELMIASSLHHPNIVPLVGFCID 128
G++ F K G VA+K+L + + +K REL + + H N++ L+
Sbjct: 36 GSVCAAFDTKTG---HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFT 91
Query: 129 PEQGL-----FLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHN 183
P + L + ++ G L V+ V++ + I + Y+H+
Sbjct: 92 PARSLEEFNDVYLVTHLMGADL-------NNIVKCQKLTDDHVQFLI-YQILRGLKYIHS 143
Query: 184 GTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQ 243
++HRD+KPSN+ ++ K+ DF LA T ++ T Y APE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYV-----ATRWYRAPEIML 195
Query: 244 HGKVSDKT-DVYAFGVVLLELLTGR 267
+ ++T D+++ G ++ ELLTGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 98/247 (39%), Gaps = 22/247 (8%)
Query: 60 HNFSKG------RVLGRGALSFVFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASS 113
H F G + LG G VF VAIK++ D +S K RE+ I
Sbjct: 5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRR 64
Query: 114 LHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSL------ERHLHEKKKGVRGNSTLPWSVR 167
L H NIV + F I G L S L + ++ V L
Sbjct: 65 LDHDNIVKV--FEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHA 122
Query: 168 YKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKK-IPKLCDFGLATWTSAPSVPFL 226
+ + Y+H+ V+HRD+KP+N+ ++++ + K+ DFGLA P
Sbjct: 123 RLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMD-PHYSHK 178
Query: 227 CKTVKG--TFGYLAPEYF-QHGKVSDKTDVYAFGVVLLELLTGRKPIEARRLQGEENLVL 283
+G T Y +P + D++A G + E+LTG+ + L+L
Sbjct: 179 GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238
Query: 284 WAKPILH 290
+ P++H
Sbjct: 239 ESIPVVH 245
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 36/134 (26%)
Query: 189 VVHRDIKPSNILLSSK-KIPKLCDFGLATWTSAPSVPFL-----------CKTVK----- 231
+VHRD+KPSN L + + K L DFGLA T + L C K
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 232 ----------GTFGYLAPEYFQHGKVSDKT---DVYAFGVVLLELLTGRKPIEARRLQGE 278
GT G+ APE K ++T D+++ GV+ L LL+GR P +
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLT--KCPNQTTAIDMWSAGVIFLSLLSGRYPF----YKAS 251
Query: 279 ENLVLWAKPILHRG 292
++L A+ + RG
Sbjct: 252 DDLTALAQIMTIRG 265
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 67 VLGRGALSFVFKGKVGLLRTSVAIKRLDK--EDKESSKAFCRELMIASSLHHPNIVPLVG 124
++G G+ V + L + VAIK++ + ED K RE+ I + L+H ++V ++
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 125 FCIDPEQGLFLIYKYVSGGSLERHLHEKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 184
I + F V LE + KK R L + + V Y+H+
Sbjct: 120 IVIPKDVEKFDELYVV----LEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA 175
Query: 185 TERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAP 221
++HRD+KP+N L++ K+CDFGLA P
Sbjct: 176 G---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 97/250 (38%), Gaps = 44/250 (17%)
Query: 105 CRELMIASSLHHPNIVPLVGFCIDPEQG-LFLIYKYVSGGSLERHLHEKKKGVRGNSTLP 163
C L I S HPN++P++G C P LI ++ GSL LHE V S
Sbjct: 58 CPRLRIFS---HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQA- 113
Query: 164 WSVRYKVALGIAESVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSV 223
K AL +A +A+LH H L+S+ + + D + S V
Sbjct: 114 ----VKFALDMARGMAFLHTLEPLIPRH--------ALNSRSV--MIDEDMTARISMADV 159
Query: 224 PFLCKTVKGTF--GYLAPEYFQHGKVSDKT----DVYAFGVVLLELLTGRKPIEARRLQG 277
F ++ + ++APE Q K D D+++F V+L EL+T P
Sbjct: 160 KFSFQSPGRMYAPAWVAPEALQ-KKPEDTNRRSADMWSFAVLLWELVTREVP-----FAD 213
Query: 278 EENLVLWAKPILHRGMAAVEELLDPRLKCTSRNSXXXXXXXXXXXXCISSEESRRPGIEE 337
N+ + GM E L P + C++ + ++RP +
Sbjct: 214 LSNMEI--------GMKVALEGLRPTIP-----PGISPHVSKLMKICMNEDPAKRPKFDM 260
Query: 338 IIAILRGEEE 347
I+ IL ++
Sbjct: 261 IVPILEKMQD 270
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,453,668
Number of Sequences: 62578
Number of extensions: 456817
Number of successful extensions: 3820
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 191
Number of HSP's that attempted gapping in prelim test: 1181
Number of HSP's gapped (non-prelim): 1140
length of query: 398
length of database: 14,973,337
effective HSP length: 101
effective length of query: 297
effective length of database: 8,652,959
effective search space: 2569928823
effective search space used: 2569928823
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)