Query 015935
Match_columns 398
No_of_seqs 127 out of 1504
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 05:05:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015935.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015935hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_A T-complex protein 1 sub 100.0 3.3E-83 1.1E-87 657.3 43.1 373 11-384 2-375 (529)
2 3iyg_G T-complex protein 1 sub 100.0 2.4E-81 8.2E-86 641.6 42.1 365 12-384 2-368 (515)
3 1q3q_A Thermosome alpha subuni 100.0 2.6E-81 8.8E-86 645.2 42.0 366 11-384 15-380 (548)
4 3ko1_A Chaperonin; 9-fold symm 100.0 2E-81 7E-86 645.5 38.4 371 6-384 14-387 (553)
5 1a6d_B Thermosome (beta subuni 100.0 3.3E-81 1.1E-85 644.3 38.5 366 11-384 13-378 (543)
6 1a6d_A Thermosome (alpha subun 100.0 2E-80 6.7E-85 638.3 40.5 364 11-384 14-377 (545)
7 3ruv_A Chaperonin, CPN; double 100.0 2.3E-80 8E-85 637.5 40.7 362 12-384 12-373 (543)
8 3p9d_A T-complex protein 1 sub 100.0 4.1E-81 1.4E-85 644.6 34.1 376 8-384 13-391 (559)
9 3p9d_D T-complex protein 1 sub 100.0 7.9E-81 2.7E-85 639.0 35.5 374 1-384 1-383 (528)
10 3iyg_H T-complex protein 1 sub 100.0 6.1E-80 2.1E-84 630.7 41.5 359 12-384 4-369 (515)
11 3iyg_B T-complex protein 1 sub 100.0 2.3E-79 7.9E-84 626.6 42.2 358 12-384 3-366 (513)
12 3iyg_D T-complex protein 1 sub 100.0 6.3E-79 2.1E-83 624.1 41.2 364 11-384 3-373 (518)
13 3iyg_E T-complex protein 1 sub 100.0 7.6E-79 2.6E-83 623.5 41.7 363 12-384 3-369 (515)
14 3iyg_Z T-complex protein 1 sub 100.0 9E-79 3.1E-83 622.3 38.5 360 12-384 3-372 (517)
15 3p9d_H T-complex protein 1 sub 100.0 1.6E-78 5.4E-83 626.4 35.2 362 13-384 19-390 (568)
16 3p9d_G T-complex protein 1 sub 100.0 3.2E-79 1.1E-83 629.4 28.2 366 6-384 8-382 (550)
17 3p9d_E T-complex protein 1 sub 100.0 4.8E-78 1.7E-82 622.0 34.8 362 13-384 39-412 (562)
18 3p9d_C T-complex protein 1 sub 100.0 2.9E-78 9.9E-83 623.8 30.5 363 6-375 3-376 (590)
19 3p9d_F T-complex protein 1 sub 100.0 1.7E-78 5.9E-83 624.4 27.4 364 11-384 9-384 (546)
20 3iyg_Q T-complex protein 1 sub 100.0 7E-76 2.4E-80 601.2 41.6 359 12-384 3-365 (512)
21 3p9d_B T-complex protein 1 sub 100.0 7.6E-77 2.6E-81 610.3 25.2 361 9-384 7-373 (527)
22 3aq1_B Thermosome subunit; gro 100.0 4.9E-71 1.7E-75 563.5 26.9 330 47-384 1-331 (500)
23 1kp8_A Groel protein; chaperon 100.0 3.5E-62 1.2E-66 500.6 34.2 312 13-373 4-338 (547)
24 1we3_A CPN60(groel); chaperoni 100.0 9.8E-62 3.3E-66 497.8 33.3 312 12-373 3-337 (543)
25 1iok_A Chaperonin 60; chaperon 100.0 1.9E-62 6.7E-67 502.7 26.3 313 12-373 4-339 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 1.9E-61 6.4E-66 494.0 23.9 314 12-374 3-338 (546)
27 1gml_A T-complex protein 1 sub 100.0 1.3E-41 4.4E-46 301.0 18.1 171 208-384 1-172 (178)
28 1ass_A Thermosome; chaperonin, 100.0 1.8E-36 6.1E-41 262.9 14.1 155 214-374 1-155 (159)
29 1srv_A Protein (groel (HSP60 c 99.1 2.2E-10 7.6E-15 95.0 10.8 126 216-369 1-144 (145)
30 3m6c_A 60 kDa chaperonin 1; ch 99.1 2.3E-10 7.9E-15 99.4 11.0 133 211-371 2-152 (194)
31 3osx_A 60 kDa chaperonin; alph 99.1 1.2E-09 4E-14 95.2 12.4 129 215-371 13-159 (201)
32 1o13_A Probable NIFB protein; 80.5 4.1 0.00014 33.1 6.7 53 276-329 67-119 (136)
33 2yx6_A Hypothetical protein PH 78.7 5.2 0.00018 31.5 6.7 53 276-329 54-106 (121)
34 1eo1_A Hypothetical protein MT 77.4 5.9 0.0002 31.3 6.7 52 277-329 57-108 (124)
35 2wfb_A Putative uncharacterize 76.1 5.7 0.00019 31.3 6.2 53 277-330 59-112 (120)
36 2re2_A Uncharacterized protein 66.9 12 0.0004 30.3 6.1 52 276-329 70-121 (136)
37 1rdu_A Conserved hypothetical 65.5 6 0.0002 30.9 4.0 52 277-329 54-105 (116)
38 2qtd_A Uncharacterized protein 58.7 23 0.00078 26.9 6.2 49 279-329 50-98 (105)
39 3psh_A Protein HI_1472; substr 44.7 41 0.0014 30.8 6.7 52 278-329 77-154 (326)
40 2xzm_U Ribosomal protein L7AE 44.0 64 0.0022 25.6 6.7 51 275-328 30-85 (126)
41 3v7q_A Probable ribosomal prot 41.9 76 0.0026 23.9 6.7 52 275-329 25-80 (101)
42 2lbw_A H/ACA ribonucleoprotein 40.1 75 0.0026 24.9 6.6 49 276-327 27-80 (121)
43 3on1_A BH2414 protein; structu 40.0 76 0.0026 23.8 6.4 52 275-329 24-79 (101)
44 3v7e_A Ribosome-associated pro 39.5 75 0.0025 23.0 6.0 51 275-328 17-71 (82)
45 2r79_A Periplasmic binding pro 39.3 71 0.0024 28.5 7.3 52 278-329 52-111 (283)
46 2wi8_A Iron-uptake system-bind 37.8 59 0.002 29.6 6.6 52 278-329 89-144 (311)
47 4a18_G RPL30; ribosome, eukary 37.4 1.1E+02 0.0038 23.1 7.0 52 275-329 28-84 (104)
48 2r7a_A Bacterial heme binding 36.5 68 0.0023 28.1 6.5 52 278-329 52-112 (256)
49 2ale_A SNU13, NHP2/L7AE family 34.2 63 0.0022 25.9 5.3 52 275-329 38-94 (134)
50 3md9_A Hemin-binding periplasm 33.7 79 0.0027 27.6 6.5 52 278-329 52-111 (255)
51 2q8p_A Iron-regulated surface 32.5 49 0.0017 29.0 4.9 52 278-329 53-110 (260)
52 2etv_A Iron(III) ABC transport 31.8 65 0.0022 29.9 5.8 52 278-329 89-151 (346)
53 1n2z_A Vitamin B12 transport p 30.8 66 0.0022 28.0 5.4 51 278-328 50-107 (245)
54 2aif_A Ribosomal protein L7A; 30.2 93 0.0032 24.9 5.7 52 275-329 47-103 (135)
55 3iz5_f 60S ribosomal protein L 30.1 1.3E+02 0.0043 23.3 6.2 51 275-328 32-87 (112)
56 1p90_A NAFY protein, hypotheti 29.9 70 0.0024 25.9 5.0 46 284-330 66-115 (145)
57 2pw9_A Putative formate dehydr 27.9 64 0.0022 29.3 4.8 40 276-315 206-245 (268)
58 1xbi_A 50S ribosomal protein L 27.5 1.1E+02 0.0039 23.8 5.7 51 276-329 36-91 (120)
59 1r3s_A URO-D, uroporphyrinogen 26.5 84 0.0029 29.5 5.6 66 260-329 226-298 (367)
60 3u5e_c L32, RP73, YL38, 60S ri 26.5 1.8E+02 0.006 22.0 6.5 52 275-329 28-84 (105)
61 3gx8_A Monothiol glutaredoxin- 26.2 1.8E+02 0.0063 22.3 6.7 60 274-334 5-78 (121)
62 4hn9_A Iron complex transport 26.2 98 0.0034 28.4 6.0 51 278-329 109-165 (335)
63 4hb7_A Dihydropteroate synthas 25.3 1.4E+02 0.0048 27.0 6.5 63 268-332 64-130 (270)
64 1vq8_F 50S ribosomal protein L 24.4 1.4E+02 0.0047 23.2 5.6 52 275-329 35-91 (120)
65 2fc3_A 50S ribosomal protein L 24.3 1.4E+02 0.0049 23.3 5.7 52 275-329 34-90 (124)
66 3ff4_A Uncharacterized protein 22.2 1.1E+02 0.0039 23.8 4.7 39 274-312 71-110 (122)
67 3cpq_A 50S ribosomal protein L 22.1 2.5E+02 0.0084 21.3 6.6 52 275-329 27-83 (110)
68 3o85_A Ribosomal protein L7AE; 21.6 1.6E+02 0.0053 23.1 5.4 52 275-329 37-93 (122)
69 2gjl_A Hypothetical protein PA 21.3 2.2E+02 0.0075 26.0 7.3 58 275-332 86-143 (328)
70 2inf_A URO-D, UPD, uroporphyri 21.1 1.3E+02 0.0045 28.0 5.8 65 260-329 222-286 (359)
71 2vef_A Dihydropteroate synthas 20.9 2.3E+02 0.008 26.1 7.3 64 268-332 67-134 (314)
72 3pry_A Heat shock protein HSP 20.7 39 0.0013 30.7 1.8 42 275-316 215-256 (268)
73 3bo9_A Putative nitroalkan dio 20.5 2.4E+02 0.0082 25.9 7.4 56 275-331 92-148 (326)
74 2eja_A URO-D, UPD, uroporphyri 20.4 2E+02 0.0068 26.4 6.9 72 260-335 208-280 (338)
75 1rlg_A 50S ribosomal protein L 20.0 1.3E+02 0.0043 23.3 4.6 52 275-329 33-89 (119)
No 1
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.3e-83 Score=657.28 Aligned_cols=373 Identities=66% Similarity=1.021 Sum_probs=357.3
Q ss_pred cccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccC
Q 015935 11 LGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVG 90 (398)
Q Consensus 11 ~~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~G 90 (398)
.+++++|.+++.+|+.||..+++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~G 81 (529)
T 3iyg_A 2 FGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVG 81 (529)
T ss_pred CcchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHh-hhcccCCccCHHHHHHHHHhhcccCccCCchH
Q 015935 91 DGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNE-KLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSD 169 (398)
Q Consensus 91 DGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~-~~s~~~~~~~~~~l~~ia~t~l~sK~~~~~~~ 169 (398)
|||||++||+++||+++.+++.+|+||+.|++||+.|++.++++|++ + +++++..+++.|.++|+|+++||+.+++++
T Consensus 82 DGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~-s~~v~~~~~e~l~~va~tsl~sK~~~~~~~ 160 (529)
T 3iyg_A 82 DGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENL-IINTDELGRDCLINAAKTSMSSKVIGINGD 160 (529)
T ss_pred CChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhc-ccCCCCCCHHHHHHHHHHHhccCcccccHH
Confidence 99999999999999999999999999999999999999999999998 6 888886679999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCceEEEEeeccccccc
Q 015935 170 FFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKM 249 (398)
Q Consensus 170 ~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~~k~ 249 (398)
+|++++++|+.++.+...+|...||+++|+|++++|+++.||++++|++|++++.|++||++++||||++++++|+++++
T Consensus 161 ~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le~~k~ 240 (529)
T 3iyg_A 161 FFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKM 240 (529)
T ss_pred HHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccCCcccCCceEEEecCCcccccc
Confidence 99999999999996433445456788899999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 250 QLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 250 ~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
+.++++.++++++++.+.++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||+
T Consensus 241 e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~tGa~ 320 (529)
T 3iyg_A 241 KLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGAT 320 (529)
T ss_pred cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHhCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCCCeEEEEcccce
Q 015935 330 MVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 330 ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~til~~~~~ 384 (398)
+++++++++..+++++.++|+|+.|+++++|+++|++|+||+.+.+|||++||++
T Consensus 321 iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t 375 (529)
T 3iyg_A 321 VLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGAN 375 (529)
T ss_pred eecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEECCch
Confidence 9999988865456788999999999999999999999999999999999999997
No 2
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.4e-81 Score=641.56 Aligned_cols=365 Identities=32% Similarity=0.516 Sum_probs=347.9
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccCC
Q 015935 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGD 91 (398)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 91 (398)
+++++|.+++.+|+.||..+++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 2 ~~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GD 81 (515)
T 3iyg_G 2 TKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGD 81 (515)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccCHHHHHHHHHhhcccCccCCchHHH
Q 015935 92 GTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFF 171 (398)
Q Consensus 92 Gtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~l 171 (398)
||||+++||++||+++.+++.+|+||+.|++||+.|++.++++|+++ +++++..|++.|.++|+|+++||.++.+.+.+
T Consensus 82 GTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~ 160 (515)
T 3iyg_G 82 GTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKI-SIPVDTSNRDTMLNIINSSITTKVISRWSSLA 160 (515)
T ss_pred ChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-hcccCCCCHHHHHHHHHHHhcCCchhhHHHHH
Confidence 99999999999999999999999999999999999999999999997 88988767899999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCccccCC-ceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCceEEEEeecccccccc
Q 015935 172 ANLVVEAVQAVKMTNQRGEVKYPIK-GINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250 (398)
Q Consensus 172 s~l~~~av~~v~~~~~~g~~~~~~~-~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~~k~~ 250 (398)
++++++|+..+.+. .++...+|++ +|+|++++|++++||++++|++|++++.|++||++++||||++++++|++++++
T Consensus 161 ~~i~vdav~~V~~~-~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e 239 (515)
T 3iyg_G 161 CNIALDAVKTVQFE-ENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE 239 (515)
T ss_pred HHHHHHHHHhcccc-cCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCCCcceeeeeEEEEEcccccccccc
Confidence 99999999988531 2233345555 499999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCeE
Q 015935 251 LGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATM 330 (398)
Q Consensus 251 ~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~i 330 (398)
.++++.+++++++..++++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||++
T Consensus 240 ~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tGa~i 319 (515)
T 3iyg_G 240 SQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARI 319 (515)
T ss_pred cCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHHhCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCcCCCCCCcce-eeeEEEEEEcCeeEEEEecCCCCCeEEEEcccce
Q 015935 331 VSTFADMEGEETFDSSLLGS-ADEVVEERVADDDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 331 i~~~~~l~~~~~~~~~~lG~-~~~v~~~~ig~~~~~~~~g~~~~~~~til~~~~~ 384 (398)
++++++ ++++++|+ |+.|+++++|+++|++|+||+++.+|||++||++
T Consensus 320 i~~l~~------l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t 368 (515)
T 3iyg_G 320 VSRPEE------LREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGAS 368 (515)
T ss_pred eccccc------cChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCC
Confidence 999876 46788999 9999999999999999999999999999999997
No 3
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2.6e-81 Score=645.21 Aligned_cols=366 Identities=37% Similarity=0.606 Sum_probs=350.9
Q ss_pred cccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccC
Q 015935 11 LGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVG 90 (398)
Q Consensus 11 ~~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~G 90 (398)
.+++.+|.+++..|+.||.++++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 15 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~G 94 (548)
T 1q3q_A 15 GTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAG 94 (548)
T ss_dssp TCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHHHHHHHHHHHHHHTS
T ss_pred CcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHHHHHHHHHhcCCEEC
Confidence 44689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccCHHHHHHHHHhhcccCccCCchHH
Q 015935 91 DGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDF 170 (398)
Q Consensus 91 DGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~ 170 (398)
|||||+++|+++||+++++++.+|+||+.|++||+.|++.++++|+++ +++++..|++.|.++|+|+++||+.++++++
T Consensus 95 DGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~ 173 (548)
T 1q3q_A 95 DGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEI-AIRVDPDDEETLLKIAATSITGKNAESHKEL 173 (548)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH-CEECCTTCHHHHHHHHHHHSCSSTTGGGHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCCHHHHHHHHHHHhhccccccchHH
Confidence 999999999999999999999999999999999999999999999997 8898766799999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCceEEEEeecccccccc
Q 015935 171 FANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250 (398)
Q Consensus 171 ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~~k~~ 250 (398)
|++++++|+.++.+. ..|...+|+++|+|.+++|++++||++++|++|++++.|++||++++||||++++++|++++++
T Consensus 174 i~~livdAv~~V~~~-~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e 252 (548)
T 1q3q_A 174 LAKLAVEAVKQVAEK-KDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTE 252 (548)
T ss_dssp HHHHHHHHHHHHCEE-SSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESSEEEEEECSCBSCCCCS
T ss_pred HHHHHHHHHHHhccc-cCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCCcceecCCEEEEEecCcCccccc
Confidence 999999999999532 1243457888999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCeE
Q 015935 251 LGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATM 330 (398)
Q Consensus 251 ~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~i 330 (398)
.++++.++++++++.++++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||++
T Consensus 253 ~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~i 332 (548)
T 1q3q_A 253 TDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKI 332 (548)
T ss_dssp SCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCC
T ss_pred CCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHHHHHHHHHhCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCCCeEEEEcccce
Q 015935 331 VSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 331 i~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~til~~~~~ 384 (398)
+++++++ +++++|+|+.|+++++|+++|++|+||+++.+|||++||++
T Consensus 333 i~~l~~~------~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t 380 (548)
T 1q3q_A 333 VTNVKDL------TPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGT 380 (548)
T ss_dssp BSSGGGC------CGGGCEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEESS
T ss_pred ecccccC------CHHHCCCceEEEEEEecCceEEEEecCCCCCeEEEEECCCC
Confidence 9998764 66789999999999999999999999999999999999987
No 4
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=2e-81 Score=645.50 Aligned_cols=371 Identities=38% Similarity=0.600 Sum_probs=346.9
Q ss_pred cccccc---ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHH
Q 015935 6 QTLDIL---GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELA 82 (398)
Q Consensus 6 ~~~~~~---~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~ 82 (398)
+|+.++ +++.+|.+++.+|+.||..|++++|+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|
T Consensus 14 ~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a 93 (553)
T 3ko1_A 14 IPVIILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIA 93 (553)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHHHHH
T ss_pred CeEEEEecCcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHHHHh
Confidence 455543 46789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccCCChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccCHHHHHHHHHhhcccC
Q 015935 83 ELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSK 162 (398)
Q Consensus 83 ~~~~~~~GDGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~sK 162 (398)
++||+++||||||++||+++||+++.+++.+|+||+.|++||+.|++.++++|+++ +++++..|++.|.++|+|+++||
T Consensus 94 ~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~d~e~L~~vA~tsl~sK 172 (553)
T 3ko1_A 94 KGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQEL-AQTVSINDTDLLRKIAMTSLSSK 172 (553)
T ss_dssp HTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CEECCTTCHHHHHHHHHHHHTTS
T ss_pred hCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHh-cCCCCCCcHHHHHHHHHHHhhHH
Confidence 99999999999999999999999999999999999999999999999999999997 88887667999999999999999
Q ss_pred ccCCchHHHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCceEEEEee
Q 015935 163 LIGGDSDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDF 242 (398)
Q Consensus 163 ~~~~~~~~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~ 242 (398)
+.+.++++|++|+++|+.++.+. .+|...+|+++|+|++++|+++.||++++|++|++++.|++||++++||||+++++
T Consensus 173 ~~~~~~~~i~~livdAv~~V~~~-~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~d~ 251 (553)
T 3ko1_A 173 AVAGAREYIADIVVKAVTQVAEL-RGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIALIDA 251 (553)
T ss_dssp SCCTTHHHHHHHHHHHHHHHCCC-TTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCBSCEEEEECS
T ss_pred hhhhHHHHHHHHHHHHHHHHHHh-cCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCccccccceEEEecC
Confidence 99999999999999999999532 13544588899999999999999999999999999999999999999999999999
Q ss_pred cccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHH
Q 015935 243 NLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHI 322 (398)
Q Consensus 243 ~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~l 322 (398)
+|++++++.++++.+++++++..++++|++++++++++|.+.|+||||++++|++.+++||.++||++++++++++|+||
T Consensus 252 ~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~leri 331 (553)
T 3ko1_A 252 SLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKL 331 (553)
T ss_dssp CBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHHHHH
T ss_pred cccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCCCeEEEEcccce
Q 015935 323 AKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 323 a~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~til~~~~~ 384 (398)
|++|||+++++++++ +++++|+|+.|+++++|+++|++|+||+++.+|||++||++
T Consensus 332 a~~tGa~ivs~l~~l------~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~t 387 (553)
T 3ko1_A 332 ARATGGRVVSNIDEI------SEQDLGYASLIEERKVGEDKMVFVEGAKNPKSISILIRGGL 387 (553)
T ss_dssp HTTTTCCEESCGGGC------CSSSSEECSEEECCCCSSSCCEEEESCSSSSCEEEEECCSS
T ss_pred HHhhCCeeecccccC------ChhhcchHHHHHHhhcCcceEEEeccCCCCceEEEeeeccH
Confidence 999999999998764 67899999999999999999999999999999999999987
No 5
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=3.3e-81 Score=644.26 Aligned_cols=366 Identities=41% Similarity=0.616 Sum_probs=345.3
Q ss_pred cccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccC
Q 015935 11 LGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVG 90 (398)
Q Consensus 11 ~~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~G 90 (398)
.+++.+|.+++..|+.||.++++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 13 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~G 92 (543)
T 1a6d_B 13 GTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVG 92 (543)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHHHHTCTTCCCT
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHHHHHhcCCEEC
Confidence 44689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccCHHHHHHHHHhhcccCccCCchHH
Q 015935 91 DGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDF 170 (398)
Q Consensus 91 DGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~ 170 (398)
|||||+++|+++||+++++++.+|+||+.|++||+.|++.++++|+++ +++++..|++.|.++|+|+|+||+.++++++
T Consensus 93 DGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~ 171 (543)
T 1a6d_B 93 DGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEI-STKIGADEKALLLKMAQTSLNSKSASVAKDK 171 (543)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH-CEECCTTHHHHHHHHHHHHHTTSGGGGGHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCCHHHHHHHHHHHhccccccccHHH
Confidence 999999999999999999999999999999999999999999999997 8888765689999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCceEEEEeecccccccc
Q 015935 171 FANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250 (398)
Q Consensus 171 ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~~k~~ 250 (398)
|++++++|+.++.+. .+|...+|+++|+|.+++|++++||++++|++|++++.|++||++++||||++++++|++++++
T Consensus 172 i~~livdAv~~v~~~-~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e 250 (543)
T 1a6d_B 172 LAEISYEAVKSVAEL-RDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPE 250 (543)
T ss_dssp HHHHHHHHHHHHEEE-CSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBSCCCCS
T ss_pred HHHHHHHHHHHhccc-ccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCCcceecCCeEEEEeccccccccc
Confidence 999999999999532 1243357888999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCeE
Q 015935 251 LGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATM 330 (398)
Q Consensus 251 ~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~i 330 (398)
.++++.++++++++.++++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||++
T Consensus 251 ~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le~ia~~tGa~i 330 (543)
T 1a6d_B 251 FDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASI 330 (543)
T ss_dssp SEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCE
T ss_pred CCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHHHHHHHHhCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCCCeEEEEcccce
Q 015935 331 VSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 331 i~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~til~~~~~ 384 (398)
+++++++ +++++|+|+.|+++++|+++|++|+||+++.+|||++||++
T Consensus 331 is~l~~l------~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t 378 (543)
T 1a6d_B 331 VSTIDEI------SSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGET 378 (543)
T ss_dssp ESCGGGC------CGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESS
T ss_pred ecccccC------CHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCCC
Confidence 9998764 67789999999999999999999999999999999999987
No 6
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=2e-80 Score=638.28 Aligned_cols=364 Identities=41% Similarity=0.646 Sum_probs=347.5
Q ss_pred cccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccC
Q 015935 11 LGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVG 90 (398)
Q Consensus 11 ~~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~G 90 (398)
.+++.+|.+++..|+.||.++++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 14 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~G 93 (545)
T 1a6d_A 14 GTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSKAQDTAVG 93 (545)
T ss_dssp ---CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGGCTTTCST
T ss_pred cchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHHHhcCCEEC
Confidence 44689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccCHHHHHHHHHhhcccCccCCchHH
Q 015935 91 DGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDF 170 (398)
Q Consensus 91 DGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~ 170 (398)
|||||+++|+++||+++++++.+|+||+.|++||+.|++.++++|+++ +++ + .+++.|.++|+|+|+||+.++++++
T Consensus 94 DGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~-~-~~~~~l~~va~tsl~sKi~~~~~~~ 170 (545)
T 1a6d_A 94 DGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEI-AEK-S-TDDATLRKIALTALSGKNTGLSNDF 170 (545)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH-CEE-C-CCHHHHHHHHHHHTTTSSCCSTHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cCC-C-CCHHHHHHHHHHHHhcccccccHHH
Confidence 999999999999999999999999999999999999999999999997 888 6 6799999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCceEEEEeecccccccc
Q 015935 171 FANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250 (398)
Q Consensus 171 ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~~k~~ 250 (398)
|++++++|+.++.+. ..|...+|++.|+|.+++|++++||++++|++|++++.|++||++++||||++++++|++++++
T Consensus 171 i~~livdAv~~v~~~-~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e 249 (545)
T 1a6d_A 171 LADLVVKAVNAVAEV-RDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTE 249 (545)
T ss_dssp HHHHHHHHHHHHCEE-SSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEEEEEEECSCBSCCCCS
T ss_pred HHHHHHHHHHHHhcc-cCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCCcceecCCEEEEEecCCCccccc
Confidence 999999999999542 1233457888999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCeE
Q 015935 251 LGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATM 330 (398)
Q Consensus 251 ~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~i 330 (398)
.++++.++++++++.++++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||++
T Consensus 250 ~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~i 329 (545)
T 1a6d_A 250 IEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKI 329 (545)
T ss_dssp SCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHHHHHHHCCCE
T ss_pred CCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHHHHHHhCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCCCeEEEEcccce
Q 015935 331 VSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 331 i~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~til~~~~~ 384 (398)
+++++++ +++++|+|+.|+++++|+++|++|+||+++.+|||++||++
T Consensus 330 is~l~~~------~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t 377 (545)
T 1a6d_A 330 VTDLDDL------TPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGT 377 (545)
T ss_dssp ESSGGGC------CGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCSS
T ss_pred ecccccC------CHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEEcCCC
Confidence 9998764 66789999999999999999999999999999999999997
No 7
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=2.3e-80 Score=637.47 Aligned_cols=362 Identities=38% Similarity=0.601 Sum_probs=348.7
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccCC
Q 015935 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGD 91 (398)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 91 (398)
+++.+|.+++.+|+.||..|++++|+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 12 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GD 91 (543)
T 3ruv_A 12 MKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEKEVGD 91 (543)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHHHHHHHHHHHTSS
T ss_pred cchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHhhhCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccCHHHHHHHHHhhcccCccCCchHHH
Q 015935 92 GTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFF 171 (398)
Q Consensus 92 Gtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~l 171 (398)
||||++||+++||+++.+++.+|+||+.|++||+.|.+.++++|+++ +++++..|++.|.++|+|+++||+.+.++++|
T Consensus 92 GTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i 170 (543)
T 3ruv_A 92 GTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTI-ACEVGAQDKEILTKIAMTSITGKGAEKAKEKL 170 (543)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHH-CEECCTTCHHHHHHHHHHHHHHTCGGGCCHHH
T ss_pred CcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHh-hCCCCCCCHHHHHHHHHHHhcccccchhHHHH
Confidence 99999999999999999999999999999999999999999999997 88987668999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCceEEEEeeccccccccc
Q 015935 172 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL 251 (398)
Q Consensus 172 s~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~~k~~~ 251 (398)
++++++|+.++.+. +|. +|+++|+|++.+|+++.||++++|++|++++.|++||++++||||++++++|++++++.
T Consensus 171 ~~livdAv~~V~~~--~g~--~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll~~~~Le~~k~e~ 246 (543)
T 3ruv_A 171 AEIIVEAVSAVVDD--EGK--VDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETET 246 (543)
T ss_dssp HHHHHHHHHHHCCT--TSC--CCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEEEEEEEEESSCBSCCCCSS
T ss_pred HHHHHHHHHHhhcc--CCC--cccceEEEEEcCCCCcccceeecceEEeccccCccccccccCcEEEEEccccccccccc
Confidence 99999999999532 243 77889999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCeEc
Q 015935 252 GVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMV 331 (398)
Q Consensus 252 ~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ii 331 (398)
++++.+++++++..++++|++++++++++|.+.|+||||++++|++.+++||.++||++++++++++|+|||++|||+++
T Consensus 247 ~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ia~~tGa~ii 326 (543)
T 3ruv_A 247 DAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGANVI 326 (543)
T ss_dssp CCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCEE
T ss_pred CceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHHHHHHhCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCCCeEEEEcccce
Q 015935 332 STFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 332 ~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~til~~~~~ 384 (398)
++++++ +++++|+|+.|+++++|+++|++|+||+++.+|||++||++
T Consensus 327 s~l~~l------~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~t 373 (543)
T 3ruv_A 327 AAIAAL------SAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTT 373 (543)
T ss_dssp SCGGGC------CGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESS
T ss_pred cccccC------CHHHCCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCC
Confidence 998764 67889999999999999999999999999999999999987
No 8
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=4.1e-81 Score=644.58 Aligned_cols=376 Identities=62% Similarity=0.960 Sum_probs=354.7
Q ss_pred ccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhc
Q 015935 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDR 87 (398)
Q Consensus 8 ~~~~~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~ 87 (398)
|...+++.+|.+++.+|+.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++
T Consensus 13 ~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~ 92 (559)
T 3p9d_A 13 LFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDR 92 (559)
T ss_dssp CCSSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHHHH
T ss_pred hhccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 55667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHh-hhcccCCccCHHHHHHHHHhhcccCccCC
Q 015935 88 EVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNE-KLAVKVEKLGKDSLVNCAKTSMSSKLIGG 166 (398)
Q Consensus 88 ~~GDGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~-~~s~~~~~~~~~~l~~ia~t~l~sK~~~~ 166 (398)
++||||||++|||++||+++.+++.+|+||+.|++||+.|++.++++|++ + +++++..+++.|.++|+|+++||+.++
T Consensus 93 e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~-s~~v~~~~~e~L~~vA~tsl~sK~~~~ 171 (559)
T 3p9d_A 93 EIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVL-STSVDTLGKETLINIAKTSMSSKIIGA 171 (559)
T ss_dssp HTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHT-GGGSCC--CTTHHHHHHHTTSSSGGGT
T ss_pred HcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhc-ccCCCCCCHHHHHHHHHHHhccCcccc
Confidence 99999999999999999999999999999999999999999999999999 6 889886678899999999999999999
Q ss_pred chHHHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceec--CceEEEEeecc
Q 015935 167 DSDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVA--PAKIACLDFNL 244 (398)
Q Consensus 167 ~~~~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~--~~kIlll~~~L 244 (398)
++++|++|+++|+.++.+...++.-.+++++|+|++++|++++||++++|++|++++.|++||++++ ||||++++++|
T Consensus 172 ~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ie~~n~kIll~~~~L 251 (559)
T 3p9d_A 172 DSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNL 251 (559)
T ss_dssp THHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTSCSEECSSSBCEEEETTCC
T ss_pred hhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCcceeeccCCceEEEEeccc
Confidence 9999999999999998531112222477889999999999999999999999999999999999999 99999999999
Q ss_pred cccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHH
Q 015935 245 QKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAK 324 (398)
Q Consensus 245 ~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~ 324 (398)
++++++.++++.++++++++.+.++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+|||+
T Consensus 252 e~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~ 331 (559)
T 3p9d_A 252 QKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRRIAR 331 (559)
T ss_dssp SCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHHHHHHHH
T ss_pred cccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCCCeEEEEcccce
Q 015935 325 ATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 325 ~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~til~~~~~ 384 (398)
+|||++++++..+...+++++.++|+|+.|++.++++++|++|+||+.+.+|||++||++
T Consensus 332 ~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t 391 (559)
T 3p9d_A 332 ATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGAN 391 (559)
T ss_dssp HSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSSCCCCEEEEESC
T ss_pred HhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCCC
Confidence 999999999966554345788999999999999999999999999999999999999987
No 9
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=7.9e-81 Score=639.00 Aligned_cols=374 Identities=30% Similarity=0.480 Sum_probs=353.3
Q ss_pred CccccccccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHH
Q 015935 1 MAISSQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVE 80 (398)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~ 80 (398)
|.+++|.+...+++.+|.+++..|+.||..+++++|+||||+||+|||+++.|+++|||||+|||++|+++||+|+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e 80 (528)
T 3p9d_D 1 MSAKVPSNATFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVE 80 (528)
T ss_dssp ------CCCSSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHH
T ss_pred CCCCcccccccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHH
Confidence 66777888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccCHHHHHHHHHhhcc
Q 015935 81 LAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMS 160 (398)
Q Consensus 81 ~~~~~~~~~GDGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~ 160 (398)
+|++||+++||||||++||+++||+++.+++.+|+||+.|++||+.|.+.++++|+++ +++++..|++.|.++|+|+++
T Consensus 81 ~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~e~l~~va~tsl~ 159 (528)
T 3p9d_D 81 VSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEM-CHKVSLSDREQLVRAASTSLS 159 (528)
T ss_dssp HHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCSCCHHHHHHHHHHHSC
T ss_pred HHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHh-hCCCCCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999997 999876679999999999999
Q ss_pred cCccCCchHHHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCC-CCceecCceEEE
Q 015935 161 SKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQG-MPLRVAPAKIAC 239 (398)
Q Consensus 161 sK~~~~~~~~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~-~~~~~~~~kIll 239 (398)
||+.++++++|++|+++|+.++.+. .+| .+++++|+|++++|++++||++++|++|++++.|++ ||++++||||++
T Consensus 160 sK~~~~~~~~i~~livdAv~~V~~~-~~~--~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll 236 (528)
T 3p9d_D 160 SKIVSQYSSFLAPLAVDSVLKISDE-NSK--NVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGL 236 (528)
T ss_dssp SSSCSTTHHHHHHHHHHHHHTTCCT-TTT--CCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEE
T ss_pred CCccchhHHHHHHHHHHHHHHhccc-cCC--ccceEEEEEEEecCCCccceEEEeeeEEeecccCcccCcccccCceEEE
Confidence 9999999999999999999998531 134 366789999999999999999999999999999998 999999999999
Q ss_pred EeecccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCC-----CHHHHHHHHHcCCeEEeeC
Q 015935 240 LDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGI-----DDMALKYFVEAGAIAVRRV 314 (398)
Q Consensus 240 l~~~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I-----~~~al~~l~~~~I~vv~~v 314 (398)
++++|++++++.++++.++++++++.++++|++++++++++|.+.|++|||++++| ++.+++||.++||++++++
T Consensus 237 ~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~ 316 (528)
T 3p9d_D 237 IQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDI 316 (528)
T ss_dssp ECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECC
T ss_pred EeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred ChHHHHHHHHHhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCC--C-CCeEEEEcccce
Q 015935 315 RKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTK--T-TSAYIILGKVPS 384 (398)
Q Consensus 315 ~~~~L~~la~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~--~-~~~~til~~~~~ 384 (398)
++++|+|||++|||++++++++ +++.++|+|+.|++.++|+++|++|+||+ + +.+|||++||++
T Consensus 317 ~k~~le~ia~~tGa~ii~~~~~------l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~t 383 (528)
T 3p9d_D 317 EREEIEFLSKGLGCKPIADIEL------FTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGAN 383 (528)
T ss_dssp CTHHHHHHHHHHTCCCCSCSTT------CCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSS
T ss_pred CHHHHHHHHHHHCCEEeccccc------CCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCC
Confidence 9999999999999999999865 47789999999999999999999999999 6 889999999987
No 10
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.1e-80 Score=630.66 Aligned_cols=359 Identities=34% Similarity=0.528 Sum_probs=343.9
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccCC
Q 015935 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGD 91 (398)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 91 (398)
+++.+|.+++.+|+.||..+++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 4 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GD 83 (515)
T 3iyg_H 4 TDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGD 83 (515)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhceeCc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccC----HHHHHHHHHhhcccCccCCc
Q 015935 92 GTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLG----KDSLVNCAKTSMSSKLIGGD 167 (398)
Q Consensus 92 Gtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~----~~~l~~ia~t~l~sK~~~~~ 167 (398)
||||+++|+++||+++.+++.+|+||+.|++||+.|++.++++|+++ +++++..+ ++.|.++|+|+++||+.+.+
T Consensus 84 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~ 162 (515)
T 3iyg_H 84 GTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEI-AVTVKKEDKVEQRKLLEKCAMTALSSKLISQQ 162 (515)
T ss_pred chhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-hcccccCChHHHHHHHHHHHHHHhcCCccccc
Confidence 99999999999999999999999999999999999999999999997 88886435 67889999999999999999
Q ss_pred hHHHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCC---CceecCceEEEEeecc
Q 015935 168 SDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGM---PLRVAPAKIACLDFNL 244 (398)
Q Consensus 168 ~~~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~---~~~~~~~kIlll~~~L 244 (398)
+++|++++++|+.++. . .+|++.|+|.+++|+++.||++++|++|++++.|++| |++++||||++++++|
T Consensus 163 ~~~i~~livdAv~~V~---~----~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~L 235 (515)
T 3iyg_H 163 KAFFAKMVVDAVMMLD---D----LLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVEL 235 (515)
T ss_pred HHHHHHHHHHHHHHhc---c----cCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEcccc
Confidence 9999999999999983 1 3677889999999999999999999999999999875 7899999999999999
Q ss_pred cccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHH
Q 015935 245 QKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAK 324 (398)
Q Consensus 245 ~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~ 324 (398)
++++++.++++.++++++++.++++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+|||+
T Consensus 236 e~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~ 315 (515)
T 3iyg_H 236 ELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMM 315 (515)
T ss_pred cccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCCCeEEEEcccce
Q 015935 325 ATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 325 ~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~til~~~~~ 384 (398)
+|||+++++++++ +++++|+|+.|+++++|+++|++|+||+++.+|||++||++
T Consensus 316 ~tGa~ii~~l~~~------~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t 369 (515)
T 3iyg_H 316 ACGGSIQTSVNAL------SSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGA 369 (515)
T ss_pred HhCCEEeeccccC------CHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCc
Confidence 9999999998664 67889999999999999999999999999999999999987
No 11
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=2.3e-79 Score=626.62 Aligned_cols=358 Identities=34% Similarity=0.518 Sum_probs=344.0
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCC--CCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhccc
Q 015935 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDI--GDVTITNDGATILKMLEVEHPAAKVLVELAELQDREV 89 (398)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~--g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~ 89 (398)
+++.+|.+++.+|+.||..+++++|+||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++||+++
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e~ 82 (513)
T 3iyg_B 3 ADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEV 82 (513)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhhh
Confidence 56889999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCcc---CHHHHHHHHHhhcccCccCC
Q 015935 90 GDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKL---GKDSLVNCAKTSMSSKLIGG 166 (398)
Q Consensus 90 GDGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~---~~~~l~~ia~t~l~sK~~~~ 166 (398)
||||||+++|+++||+++.+++.+|+||+.|++||+.|.+.++++|+++ +++++.. +++.|.++|+|+++||+.++
T Consensus 83 GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~~l~~va~tslssK~~~~ 161 (513)
T 3iyg_B 83 GDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNS-AVDHGSDEVKFRQDLMNIAGTTLSSKLLTH 161 (513)
T ss_pred CCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-CcCcccccccCHHHHHHHHHhhhccccccc
Confidence 9999999999999999999999999999999999999999999999997 8888632 57899999999999999999
Q ss_pred chHHHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCceEEEEeecccc
Q 015935 167 DSDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQK 246 (398)
Q Consensus 167 ~~~~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~ 246 (398)
++++|++++++|+.++.+ .+|++.|+|++++|+++.||++++|++|++++.++ ||++++||||++++++|++
T Consensus 162 ~~~~i~~livdAv~~V~~-------~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~-m~~~~en~kIll~~~~Le~ 233 (513)
T 3iyg_B 162 HKDHFTKLAVEAVLRLKG-------SGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN-QPKRIENAKILIANTGMDT 233 (513)
T ss_pred chHHHHHHHHHHHHHhcc-------cCCcCeEEEEEeCCCCccceeEEeeEEEeccccCC-CceeecCceEEEEcCCccc
Confidence 999999999999999842 26778999999999999999999999999999888 9999999999999999999
Q ss_pred cccc-cceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHH
Q 015935 247 TKMQ-LGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKA 325 (398)
Q Consensus 247 ~k~~-~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~ 325 (398)
++++ .++++.+++++++..+.++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++.+|+|||++
T Consensus 234 ~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~ 313 (513)
T 3iyg_B 234 DKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALV 313 (513)
T ss_pred ccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCCCeEEEEcccce
Q 015935 326 TGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 326 tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~til~~~~~ 384 (398)
|||+++++++++ +++++|+|+.|++..+|+++|++|+||+++.+|||++||++
T Consensus 314 tGa~ii~~l~~l------~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t 366 (513)
T 3iyg_B 314 TGGEIASTFDHP------ELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGAT 366 (513)
T ss_pred hCCEEecccccC------CHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCC
Confidence 999999998764 67899999999999999999999999999999999999997
No 12
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.3e-79 Score=624.09 Aligned_cols=364 Identities=33% Similarity=0.515 Sum_probs=347.1
Q ss_pred cccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccC
Q 015935 11 LGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVG 90 (398)
Q Consensus 11 ~~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~G 90 (398)
.+++++|.+++.+|+.||..+++++|+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 3 ~~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~G 82 (518)
T 3iyg_D 3 YQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAG 82 (518)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccCHHHHHHHHHhhcccCccCCchHH
Q 015935 91 DGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDF 170 (398)
Q Consensus 91 DGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~ 170 (398)
|||||++|||++||+++.+++.+|+||+.|++||+.|.+.++++|+++ +++++..+++.|.++|+|+++||+.+.|+++
T Consensus 83 DGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~ 161 (518)
T 3iyg_D 83 DGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDM-SRPVELSDRETLLNSAATSLNSKVVSQYSSL 161 (518)
T ss_pred CCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-eeeCCCCChHHHHHHhHhhhccccchhhHHH
Confidence 999999999999999999999999999999999999999999999997 9998766789999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCceEEEEeecccccccc
Q 015935 171 FANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250 (398)
Q Consensus 171 ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~~k~~ 250 (398)
|++++++|+.++.+...+| .+|+++|+|.+++|+++.||++++|++|++++.| +||+.++||||++++++|++++++
T Consensus 162 i~~livdAv~~V~~~~~~~--~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~-~mp~~i~n~kIlll~~~Le~~k~~ 238 (518)
T 3iyg_D 162 LSPMSVDAVMKVIDPATAT--SVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVAN-SGITRVEKAKIGLIQFCLSAPKTD 238 (518)
T ss_pred HHHHHHHHHHHhhccccCC--CcccceEEEEEcCCCChhhheEeccEEEeccccc-CCCccccCceEEEEEeeccccccc
Confidence 9999999999985321133 4677899999999999999999999999999998 999999999999999999999999
Q ss_pred cceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEe-----CCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHH
Q 015935 251 LGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILT-----TKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKA 325 (398)
Q Consensus 251 ~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~-----~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~ 325 (398)
.+.++.++++++++.++++|++++++++++|.+.|++|||+ +++|++.+++||.++||++++++++.+|+|||++
T Consensus 239 ~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~ 318 (518)
T 3iyg_D 239 MDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKT 318 (518)
T ss_pred cCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred hCCeEccccccccCCcCCCCCCcceeeeEEEEEEcC-eeEEEEecCCC-CCeEEEEcccce
Q 015935 326 TGATMVSTFADMEGEETFDSSLLGSADEVVEERVAD-DDVIMIKGTKT-TSAYIILGKVPS 384 (398)
Q Consensus 326 tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~-~~~~~~~g~~~-~~~~til~~~~~ 384 (398)
|||++++++++ ++++++|+|+.|++.++|+ ++|++|+||+. +.+|||++||++
T Consensus 319 tGa~ii~~l~~------l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~t 373 (518)
T 3iyg_D 319 IGTKPVAHVDQ------FTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSN 373 (518)
T ss_pred hCCEEeccccc------CCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCC
Confidence 99999999866 4678999999999999999 89999999998 899999999997
No 13
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.6e-79 Score=623.54 Aligned_cols=363 Identities=34% Similarity=0.464 Sum_probs=346.1
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccCC
Q 015935 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGD 91 (398)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 91 (398)
.++.+|.+++..|+.||..+++++|+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GD 82 (515)
T 3iyg_E 3 KSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGD 82 (515)
T ss_pred chhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCc--cCHHHHHHHHHhhcccCccCCchH
Q 015935 92 GTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEK--LGKDSLVNCAKTSMSSKLIGGDSD 169 (398)
Q Consensus 92 Gtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~--~~~~~l~~ia~t~l~sK~~~~~~~ 169 (398)
||||++|||++||+++.+++.+|+||+.|++||+.|.+.++++|+++ +++++. .|++.|.++|+|+++||+.+.+.+
T Consensus 83 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~ 161 (515)
T 3iyg_E 83 GTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKI-SDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHR 161 (515)
T ss_pred chhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-ceecCCCccCHHHHHHHHHHHhcccchhHHHH
Confidence 99999999999999999999999999999999999999999999997 888753 457899999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCceEEEEeeccccccc
Q 015935 170 FFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKM 249 (398)
Q Consensus 170 ~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~~k~ 249 (398)
.|++++++|+..+.... + ..+|+++|+|++++|+++.||++++|++|++++.|++||+..++|||++++|+|+++++
T Consensus 162 ~l~~l~~dav~~V~~~~--~-~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~ 238 (515)
T 3iyg_E 162 QMAEIAVNAVLTVADMQ--R-RDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKP 238 (515)
T ss_pred HHHHHHHHHHHhhcccc--c-CCCCcccEEEEEecCCCcccceEEeeEEEecccccccccccCCCceEEEEcCccccccc
Confidence 99999999999885321 1 14677899999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 250 QLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 250 ~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
+.++++.++++++++.+.++|+++++++++++.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||+
T Consensus 239 ~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa~ 318 (515)
T 3iyg_E 239 KTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGGR 318 (515)
T ss_pred cccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccccccccCCcCCCCCCcceeeeEEEEEEcC--eeEEEEecCCCCCeEEEEcccce
Q 015935 330 MVSTFADMEGEETFDSSLLGSADEVVEERVAD--DDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 330 ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~--~~~~~~~g~~~~~~~til~~~~~ 384 (398)
++++++++ +++++|+|+.|+++++|+ ++|++|+||+++.+|||++||++
T Consensus 319 ii~~l~~l------~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~t 369 (515)
T 3iyg_E 319 IVPRFSEL------TAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGN 369 (515)
T ss_pred EecccccC------CHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCc
Confidence 99998664 678999999999999997 89999999999999999999997
No 14
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9e-79 Score=622.31 Aligned_cols=360 Identities=27% Similarity=0.470 Sum_probs=344.1
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccCC
Q 015935 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGD 91 (398)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 91 (398)
++..+|.+++.+|+.||.++++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 3 ~~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GD 82 (517)
T 3iyg_Z 3 AEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGD 82 (517)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccCHHHHHHHHHhhcccCccCCchHHH
Q 015935 92 GTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFF 171 (398)
Q Consensus 92 Gtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~l 171 (398)
||||+++|+++||+++.+++.+|+||+.|++||+.|++.++++|+++ +++++. +++.|.++|+|+++||+.+.+.++|
T Consensus 83 GTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~-~~~~L~~va~tsl~sKi~~~~~d~l 160 (517)
T 3iyg_Z 83 GTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQV-KVSKEM-DRETLIDVARTSLRTKVHAELADVL 160 (517)
T ss_pred CceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhh-CcCCCC-CHHHHHHHHHHHhccccchhHHHHH
Confidence 99999999999999999999999999999999999999999999997 888764 7899999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCceEEEEeeccccccccc
Q 015935 172 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL 251 (398)
Q Consensus 172 s~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~~k~~~ 251 (398)
++++++|+..+... + ..+|+++|+|++++|++..||++++|++|++++.|++||++++||||++++++|+++|++.
T Consensus 161 a~l~vdaV~~V~~~---~-~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e~ 236 (517)
T 3iyg_Z 161 TEAVVDSILAIKKQ---D-EPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEV 236 (517)
T ss_pred HHHHHHHhheeccC---C-CcCChhHheeeeecCCCccccceEeeEEEeccCCCCCccccccCCeEEEeccccccccccc
Confidence 99999999888532 1 2477889999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCe---------EEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHH
Q 015935 252 GVQVLVTDPRELEKIRQREADMTKERIEKLLKAGAN---------VILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHI 322 (398)
Q Consensus 252 ~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~---------lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~l 322 (398)
++++.++++++++.++++|+++++..+++|...+++ |||++++|++.+++||.++||++++++++++|+||
T Consensus 237 ~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~leri 316 (517)
T 3iyg_Z 237 NSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMERL 316 (517)
T ss_pred ceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHHH
Confidence 999999999999999999999999999999999887 58999999999999999999999999999999999
Q ss_pred HHHhCCeEccccccccCCcCCCCCC-cceeeeEEEEEEcCeeEEEEecCCCCCeEEEEcccce
Q 015935 323 AKATGATMVSTFADMEGEETFDSSL-LGSADEVVEERVADDDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 323 a~~tGa~ii~~~~~l~~~~~~~~~~-lG~~~~v~~~~ig~~~~~~~~g~~~~~~~til~~~~~ 384 (398)
|++|||+++++++++ ++++ +|+|+ |+++++|+++|++|+||+++.+|||++||++
T Consensus 317 a~~tGa~iv~~l~~l------~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t 372 (517)
T 3iyg_Z 317 TLACGGIALNSLDDL------NPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPN 372 (517)
T ss_pred HHHhCCEEecchhhC------cccccCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCc
Confidence 999999999998764 6778 99999 9999999999999999999999999999987
No 15
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.6e-78 Score=626.39 Aligned_cols=362 Identities=26% Similarity=0.411 Sum_probs=338.7
Q ss_pred ccccc-HHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccCC
Q 015935 13 ERQAG-QDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGD 91 (398)
Q Consensus 13 ~~~~g-~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 91 (398)
++++| .+++.+|+.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 19 ~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~~qd~e~GD 98 (568)
T 3p9d_H 19 NSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMATEQQKIDMGD 98 (568)
T ss_dssp CBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHHHHHHHHHHHHHHTTSSS
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHhhhceeCC
Confidence 56788 57999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccC--CccCHHHHHHHHHhhcccCccCCchH
Q 015935 92 GTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKV--EKLGKDSLVNCAKTSMSSKLIGGDSD 169 (398)
Q Consensus 92 Gtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~--~~~~~~~l~~ia~t~l~sK~~~~~~~ 169 (398)
||||++||+++||+++.+++.+|+||..|++||+.|++.++++|+++ +.++ +..+++.|.++|+|+++||+.+++ +
T Consensus 99 GTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~-a~~v~~~~~~~~~l~~va~tsl~sK~~~~~-~ 176 (568)
T 3p9d_H 99 GTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEM-VVGEITDKNDKNELLKMIKPVISSKKYGSE-D 176 (568)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH-CCSCCCCCCTTHHHHHHHHHHHTTTSTTCH-H
T ss_pred CceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-ccccCCCCCCHHHHHHHHHHHhhccCcchH-H
Confidence 99999999999999999999999999999999999999999999997 7765 334688999999999999999988 9
Q ss_pred HHHHHHHHHHHHhhcccC--CCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceec---CceEEEEeecc
Q 015935 170 FFANLVVEAVQAVKMTNQ--RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVA---PAKIACLDFNL 244 (398)
Q Consensus 170 ~ls~l~~~av~~v~~~~~--~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~---~~kIlll~~~L 244 (398)
+|++|+++|+.++.+... .+...+|+++|+|++++|++++||++++|++|++++. +||++++ ||||++++|+|
T Consensus 177 ~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~~--~m~~~i~~~~n~kIlll~~~L 254 (568)
T 3p9d_H 177 ILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPE--GHVKSLSEDKKHKVAVFTCPL 254 (568)
T ss_dssp HHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCBS--SGGGSCCCCSSCEEEEECSCS
T ss_pred HHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeeccc--CCcEEEecCCcceEEEEccCc
Confidence 999999999998853200 1222577889999999999999999999999999885 6999999 99999999999
Q ss_pred cccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHH
Q 015935 245 QKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAK 324 (398)
Q Consensus 245 ~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~ 324 (398)
++++++.++++.+++++++..++++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++.+|+|||+
T Consensus 255 e~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI~av~~v~~~~leria~ 334 (568)
T 3p9d_H 255 DIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGILVLKVPSKFELRRLCR 334 (568)
T ss_dssp SSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTCEEECCCCHHHHHHHHH
T ss_pred cccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCeEEEecCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCC--CCCeEEEEcccce
Q 015935 325 ATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTK--TTSAYIILGKVPS 384 (398)
Q Consensus 325 ~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~--~~~~~til~~~~~ 384 (398)
+|||+++++++++ +++++|+|+.|++.++|+++|++|+||+ .+.+|||++||++
T Consensus 335 ~tGa~ivs~l~~l------~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t 390 (568)
T 3p9d_H 335 VCGATPLPRLGAP------TPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGAT 390 (568)
T ss_dssp HHSCCCCSSSSCC------CGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESC
T ss_pred HhCCEEEeccccC------CHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCc
Confidence 9999999998764 6788999999999999999999999999 7899999999997
No 16
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=3.2e-79 Score=629.38 Aligned_cols=366 Identities=33% Similarity=0.503 Sum_probs=342.9
Q ss_pred cccccc---ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHH
Q 015935 6 QTLDIL---GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELA 82 (398)
Q Consensus 6 ~~~~~~---~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~ 82 (398)
+|+.++ +++.+|.+++.+|+.||..||+++|+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|
T Consensus 8 ~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a 87 (550)
T 3p9d_G 8 PTIVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVDIS 87 (550)
T ss_dssp --------CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHHHHHHHHHH
T ss_pred cchhhhcCCcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHH
Confidence 455543 46789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccCCChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccC---HHHHHHHHHhhc
Q 015935 83 ELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLG---KDSLVNCAKTSM 159 (398)
Q Consensus 83 ~~~~~~~GDGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~---~~~l~~ia~t~l 159 (398)
++||+++||||||++|||++||+++.+++.+|+||+.|++||+.|++.++++|+++ +++++..| ++.|.++|+|++
T Consensus 88 ~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~~L~~vA~tsl 166 (550)
T 3p9d_G 88 RAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINEL-AVDITSEKSSGRELLERCARTAM 166 (550)
T ss_dssp HHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHS-EECCCCC------CHHHHHHHHH
T ss_pred HHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cccCCCCcchhHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999997 88887555 788999999999
Q ss_pred ccCccCCchHHHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCC---CCCceecCce
Q 015935 160 SSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQ---GMPLRVAPAK 236 (398)
Q Consensus 160 ~sK~~~~~~~~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~---~~~~~~~~~k 236 (398)
+||+.+.++++|++++++|+.++.+ + .+|+++|+|++++|++++||++++|++|++++.|+ +||++++|||
T Consensus 167 ~sK~~~~~~~~i~~livdAv~~V~~---~---~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~k 240 (550)
T 3p9d_G 167 SSKLIHNNADFFVKMCVDAVLSLDR---N---DLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPK 240 (550)
T ss_dssp HHTTTGGGHHHHHHHHHHHHHHCCS---S---SCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSCC
T ss_pred cCccccccHhHHHHHHHHHHHHhCc---c---ccCchheeEEEecCCCccceeEEeeEEEeccccccccccCcccccCce
Confidence 9999999999999999999999842 1 36778999999999999999999999999999987 6889999999
Q ss_pred EEEEeecccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCCh
Q 015935 237 IACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRK 316 (398)
Q Consensus 237 Illl~~~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~ 316 (398)
|++++++|++++++.++++.+++++++..+++.|++++++++++|.+.|++||+++++|++.+++||.++||++++++++
T Consensus 241 Ill~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v~k 320 (550)
T 3p9d_G 241 ILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSA 320 (550)
T ss_dssp EEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECCCT
T ss_pred EEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCCCeEEEEcccce
Q 015935 317 EDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 317 ~~L~~la~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~til~~~~~ 384 (398)
++|+|||++|||+++++++++ +++++|+|+.|+++++|+++|++|+||+++.+|||++||++
T Consensus 321 ~~lerIa~~tGa~iis~l~~l------~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~t 382 (550)
T 3p9d_G 321 DDMNRVIQAVGGSIQSTTSDI------KPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGA 382 (550)
T ss_dssp THHHHHHHHTCCCCBSSGGGC------CGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSS
T ss_pred HHHHHHHHHhCCceecchhhC------CHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCc
Confidence 999999999999999998764 67889999999999999999999999999999999999987
No 17
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=4.8e-78 Score=622.04 Aligned_cols=362 Identities=34% Similarity=0.509 Sum_probs=342.0
Q ss_pred cccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccCCC
Q 015935 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDG 92 (398)
Q Consensus 13 ~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDG 92 (398)
++.+|.+++..|+.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|||
T Consensus 39 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDG 118 (562)
T 3p9d_E 39 KRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGDG 118 (562)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHHHHHHHHHHHHHHHHTSSC
T ss_pred eecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHHHHHHHHHHHHHHhhcCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccC----HHHHHHHHHhhcccCccCCch
Q 015935 93 TTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLG----KDSLVNCAKTSMSSKLIGGDS 168 (398)
Q Consensus 93 tts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~----~~~l~~ia~t~l~sK~~~~~~ 168 (398)
|||++|||++||+++.+++.+|+||+.|++||+.|++.++++|+++ +++++..+ ++.|.++|+|+++||+.+.+.
T Consensus 119 TTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~ 197 (562)
T 3p9d_E 119 TTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEET-CDDISASNDELFRDFLLRAAKTSLGSKIVSKDH 197 (562)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTT-TSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTH
T ss_pred cccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-ccCcCCCcchhhHHHHHHHHHHhcCCchhHHHH
Confidence 9999999999999999999999999999999999999999999997 88876432 278999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCcee------cCceEEEEee
Q 015935 169 DFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRV------APAKIACLDF 242 (398)
Q Consensus 169 ~~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~------~~~kIlll~~ 242 (398)
++|++++++|+..+.... + -.+|+++|+|++++|++++||++++|++|++++.|++||+.. +++||+++++
T Consensus 198 d~la~l~vdAV~~V~~~~-~--~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m~~~~~~~~~~~~~kIall~~ 274 (562)
T 3p9d_E 198 DRFAEMAVEAVINVMDKD-R--KDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTC 274 (562)
T ss_dssp HHHHHHHHHHHHTSSTTT-C--SCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTSCCC-----TTCSSCEECEEES
T ss_pred HHHHHHHHHHheeecccc-c--CCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCCcCcccccccccccceEEEecc
Confidence 999999999999885321 1 247788999999999999999999999999999999999999 8999999999
Q ss_pred cccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHH
Q 015935 243 NLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHI 322 (398)
Q Consensus 243 ~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~l 322 (398)
+|++++++.++++.++++++++.+.++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+||
T Consensus 275 ~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~~v~~v~k~~le~i 354 (562)
T 3p9d_E 275 PFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRWVGGQELEHI 354 (562)
T ss_dssp CCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCCCEECCCTTTHHHH
T ss_pred cccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcC--eeEEEEecCCCCCeEEEEcccce
Q 015935 323 AKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVAD--DDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 323 a~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~--~~~~~~~g~~~~~~~til~~~~~ 384 (398)
|++|||++++++++ ++++++|+|+.|+++++|+ ++|++|+||+++.+|||++||++
T Consensus 355 a~~TGa~iis~l~~------l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~t 412 (562)
T 3p9d_E 355 AISTNGRIVPRFQD------LSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSN 412 (562)
T ss_dssp HHHHCCCEEESSSC------CCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTT
T ss_pred HHHhCCEEEecccc------CCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCC
Confidence 99999999999866 4678999999999999985 89999999999999999999986
No 18
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=2.9e-78 Score=623.83 Aligned_cols=363 Identities=29% Similarity=0.463 Sum_probs=332.8
Q ss_pred cccccc---ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHH
Q 015935 6 QTLDIL---GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELA 82 (398)
Q Consensus 6 ~~~~~~---~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~ 82 (398)
+|+.+. +++.+|.+++..|+.||..+++++|+||||+||+|||+++.|+++|||||+||+++|+++||+|+|++++|
T Consensus 3 ~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e~a 82 (590)
T 3p9d_C 3 APVVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLELS 82 (590)
T ss_dssp ---CCSCTTCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHHHT
T ss_pred CCeEeecCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHHHH
Confidence 465543 46899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccCCChhhHHHHHHHHHHHHHHH-HhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccCHHHHHHHHHhhccc
Q 015935 83 ELQDREVGDGTTSVVIVAAELLKRANDL-VRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSS 161 (398)
Q Consensus 83 ~~~~~~~GDGtts~vlL~~~ll~~~~~l-i~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~s 161 (398)
++||+++||||||++|||++||+++.++ +.+|+||+.|++||+.|++.++++|+++ +++++..+++.|.++|+|+++|
T Consensus 83 ~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~e~L~~vA~tslsS 161 (590)
T 3p9d_C 83 RTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQV-SKPVDVENDAAMKKLIQASIGT 161 (590)
T ss_dssp TTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHH-CCTTTTCCTHHHHHHHTTTSTT
T ss_pred HhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHH-hhccccCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999 9999999999999999999999999997 8898876789999999999999
Q ss_pred CccCCchHHHHHHHHHHHHHhhcccCCCC-----ccccCC-ceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCc
Q 015935 162 KLIGGDSDFFANLVVEAVQAVKMTNQRGE-----VKYPIK-GINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPA 235 (398)
Q Consensus 162 K~~~~~~~~ls~l~~~av~~v~~~~~~g~-----~~~~~~-~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~ 235 (398)
|+.++++++|++++++|+..+.+.+..+. ..+|++ +|+|++++|+++.||++++|++|++++.|++||++++||
T Consensus 162 K~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m~~~~en~ 241 (590)
T 3p9d_C 162 KYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENP 241 (590)
T ss_dssp STTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTTSCSCEESC
T ss_pred ccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCCCcceeeee
Confidence 99999999999999999999854221110 124443 799999999999999999999999999999999999999
Q ss_pred eEEEEeecccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCC
Q 015935 236 KIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVR 315 (398)
Q Consensus 236 kIlll~~~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~ 315 (398)
||++++++|+++|++.++++.+++++++..+++.|++++++++++|.+.|++|||++++|++.+++||.++||+++++++
T Consensus 242 kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~av~~~~ 321 (590)
T 3p9d_C 242 RVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRRVK 321 (590)
T ss_dssp CEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCCCCCCC
T ss_pred EEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccceeeccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCeEccccccccCCcCCCCCCcce-eeeEEEEEEcCeeEEEEecCCCCCe
Q 015935 316 KEDMRHIAKATGATMVSTFADMEGEETFDSSLLGS-ADEVVEERVADDDVIMIKGTKTTSA 375 (398)
Q Consensus 316 ~~~L~~la~~tGa~ii~~~~~l~~~~~~~~~~lG~-~~~v~~~~ig~~~~~~~~g~~~~~~ 375 (398)
+++|+|||++|||++++++++ ++++++|+ |+.|++.++|+++|++|+||+++.+
T Consensus 322 k~~le~ia~~TGa~iis~l~~------~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~ 376 (590)
T 3p9d_C 322 KSDNNRIARVTGATIVNRVED------LKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGS 376 (590)
T ss_dssp HHHHHHHHHHHTCCCCSCSTT------CCTTSCBCCCSEEECCEETTEECEEECC------
T ss_pred HHHHHHHHHHhCCceeecccC------CCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccc
Confidence 999999999999999998866 46789999 9999999999999999999998887
No 19
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.7e-78 Score=624.44 Aligned_cols=364 Identities=24% Similarity=0.444 Sum_probs=344.9
Q ss_pred cccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccC
Q 015935 11 LGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVG 90 (398)
Q Consensus 11 ~~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~G 90 (398)
.+++.+|.+++..|+.||.+|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 9 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~G 88 (546)
T 3p9d_F 9 KAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAAQDEITG 88 (546)
T ss_dssp TEEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHHHHHHHCS
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCc--cCHHHHHHHHHhhcccCccCCch
Q 015935 91 DGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEK--LGKDSLVNCAKTSMSSKLIGGDS 168 (398)
Q Consensus 91 DGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~--~~~~~l~~ia~t~l~sK~~~~~~ 168 (398)
|||||++||+++||+++.+++.+|+||+.|++||+.|++.++++|+++ +.+++. .+++.|.++|+|+++||+.+.+.
T Consensus 89 DGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~ 167 (546)
T 3p9d_F 89 DGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEF-KISKTNLSNDREFLLQVARSSLLTKVDADLT 167 (546)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHH-CCCCSSSSTTCHHHHHHHHHHTCSTTHHHHC
T ss_pred CCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHh-hccccccccCHHHHHHHHHHHhCCCcchhHH
Confidence 999999999999999999999999999999999999999999999997 888753 47899999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCceEEEEeecccccc
Q 015935 169 DFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTK 248 (398)
Q Consensus 169 ~~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~~k 248 (398)
+.|++++++|+..+.+.. .+ .+|+++|++++++|++..||++++|++|++++.|++||++++||||++++|+|++++
T Consensus 168 d~la~l~vdaV~~V~~~~-~~--~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~~~~Le~~k 244 (546)
T 3p9d_F 168 EVLTPIVTDAVLSVYDAQ-AD--NLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEK 244 (546)
T ss_dssp SSHHHHHHHHHHHTHHHH-HT--TCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSSSCSSBCSCCCCEECCCSSSCC
T ss_pred HHHHHHHHHhheEeecCC-CC--cccchheEEEEecCCCccccEEEeeEEEecccccccCcceecCceEEEecCcccccc
Confidence 999999999999986321 11 467889999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCC----------CeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHH
Q 015935 249 MQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAG----------ANVILTTKGIDDMALKYFVEAGAIAVRRVRKED 318 (398)
Q Consensus 249 ~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~g----------v~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~ 318 (398)
++.++++.++++++++.++++|++++++++++|...+ ++|||++++|++.+++||.++||++++++++++
T Consensus 245 ~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~vr~v~~~~ 324 (546)
T 3p9d_F 245 TEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILALRRAKRRN 324 (546)
T ss_dssp CSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEEECCCCHHH
T ss_pred cccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCeeEecCCHHH
Confidence 9999999999999999999999999999999998865 249999999999999999999999999999999
Q ss_pred HHHHHHHhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCCCeEEEEcccce
Q 015935 319 MRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 319 L~~la~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~til~~~~~ 384 (398)
|+|||++|||++++++++ ++++++|+|+.|+++++|+++|++|+||+++.+|||++||++
T Consensus 325 leria~~tGa~ii~~l~~------l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t 384 (546)
T 3p9d_F 325 MERLQLVTGGEAQNSVED------LSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTILIKGST 384 (546)
T ss_dssp HHHHHHTTTBCCCCCCSS------CSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSC
T ss_pred HHHHHHHhCCEEecchhh------CCHhHCCcccEEEEEEecCceEEEEecCCCCceEEEEECCCC
Confidence 999999999999999866 467899999999999999999999999999999999999997
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7e-76 Score=601.19 Aligned_cols=359 Identities=28% Similarity=0.434 Sum_probs=338.2
Q ss_pred cccccc-HHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccC
Q 015935 12 GERQAG-QDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVG 90 (398)
Q Consensus 12 ~~~~~g-~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~G 90 (398)
.++++| .+++.+|+.||..+++++|+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 3 ~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~G 82 (512)
T 3iyg_Q 3 AKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVG 82 (512)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhhhC
Confidence 357899 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcc--cCCccCHHHHHHHHHhhcccCccCCch
Q 015935 91 DGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAV--KVEKLGKDSLVNCAKTSMSSKLIGGDS 168 (398)
Q Consensus 91 DGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~--~~~~~~~~~l~~ia~t~l~sK~~~~~~ 168 (398)
|||||++||+++||+++.+++.+|+||+.|++||+.|++.++++|+++ +. +.+..+++.|.++|+|+++||+.+ ++
T Consensus 83 DGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~-~~~~~~~~~~~~~l~~va~tsl~sK~~~-~~ 160 (512)
T 3iyg_Q 83 DGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDL-VCCSAKNLRDVDEVSSLLHTSVMSKQYG-NE 160 (512)
T ss_pred CChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-hcccCCCCCCHHHHHHHHHHHhCCCCcc-ch
Confidence 999999999999999999999999999999999999999999999986 43 334447899999999999999876 68
Q ss_pred HHHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCceEEEEeecccccc
Q 015935 169 DFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTK 248 (398)
Q Consensus 169 ~~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~~k 248 (398)
+++++++++|+.++.+. ++ .+++++|++.|.+|+++.||++++|++|++++.+ ||++.+|+||+++++|+++.+
T Consensus 161 ~~i~~livdAv~~V~~~--~~--~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~ 234 (512)
T 3iyg_Q 161 VFLAKLIAQACVSIFPD--SG--HFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG--DVTSVKDAKIAVYSCPFDGMI 234 (512)
T ss_pred HHHHHHHHHHHHHHhcc--CC--cccHhHeeEeeccCCCcccceEEeeEEEecCcCC--CCcccccCceEEEeccccccc
Confidence 99999999999998532 23 3667899999999999999999999999999876 999999999999999999999
Q ss_pred cccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCC
Q 015935 249 MQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGA 328 (398)
Q Consensus 249 ~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa 328 (398)
++.++++.+++++++..+.++|++++++++++|.+.|++||+++++|++.+++||.++||++++++++.+|+|||++|||
T Consensus 235 ~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~tGa 314 (512)
T 3iyg_Q 235 TETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKTVGA 314 (512)
T ss_pred ccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCC-CCCeEEEEcccce
Q 015935 329 TMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTK-TTSAYIILGKVPS 384 (398)
Q Consensus 329 ~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~-~~~~~til~~~~~ 384 (398)
++++++++ ++++++|+|+.|++.++|+++|++|+||+ .+.+|||++||++
T Consensus 315 ~iis~l~~------~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~t 365 (512)
T 3iyg_Q 315 TALPRLNP------PVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGST 365 (512)
T ss_pred EEeccccc------CCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCc
Confidence 99999876 46789999999999999999999999997 4789999999997
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=7.6e-77 Score=610.29 Aligned_cols=361 Identities=33% Similarity=0.505 Sum_probs=340.9
Q ss_pred cccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeec-CCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhc
Q 015935 9 DILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVD-DIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDR 87 (398)
Q Consensus 9 ~~~~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~-~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~ 87 (398)
...+++.+|.+++.+|+.||..+++++|+||||+||+|||++ +.|+++|||||+|||++|+++||+|+|++++|++||+
T Consensus 7 ~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a~~qd~ 86 (527)
T 3p9d_B 7 GDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDD 86 (527)
T ss_dssp CSCEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHHHHHHH
T ss_pred cCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHHHHhHh
Confidence 345678999999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhhhcccCCccC---HHHHHHHHHhhcccCc
Q 015935 88 EVGDGTTSVVIVAAELLKRANDLVRN-KIHPTSIISGYRLAMREACKYVNEKLAVKVEKLG---KDSLVNCAKTSMSSKL 163 (398)
Q Consensus 88 ~~GDGtts~vlL~~~ll~~~~~li~~-gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~---~~~l~~ia~t~l~sK~ 163 (398)
++||||||++|||++||+++++++.+ |+||..|++||+.|.+.++++|+++ +++++..+ ++.|.++|+|+++||+
T Consensus 87 ~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~~l~~vA~tSl~sK~ 165 (527)
T 3p9d_B 87 EVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKA-AVDNSHDKTMFREDLIHIAKTTLSSKI 165 (527)
T ss_dssp HTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHT-CBCCCCCHHHHHHHHHHHHHHHHTTSG
T ss_pred hhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh-CccCCCcchhhHHHHHHHHHhccccCc
Confidence 99999999999999999999999999 9999999999999999999999997 88886422 7899999999999999
Q ss_pred cCCchHHHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCCCCCceecCceEEEEeec
Q 015935 164 IGGDSDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFN 243 (398)
Q Consensus 164 ~~~~~~~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~ 243 (398)
.+.+++++++|+++|+.++. .++ |++.|+|.++.|+++.||++++|++|++++.+++ |++++||||++++++
T Consensus 166 ~~~~~~~i~~li~dAv~~V~---~~~----~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~-p~~~~n~kIlll~~~ 237 (527)
T 3p9d_B 166 LSQDKDHFAELATNAILRLK---GST----NLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ-PKRIENAKILIANTT 237 (527)
T ss_dssp GGGGHHHHHHHHHHHHHTTC---TTC----CTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC-CSCCSSCEEEEECSC
T ss_pred ccchHHHHHHHHHHHHHHhc---ccC----CcceEEEEEcCCCCccccEEEEeEEEecccCCCC-CeeeecceEEEeccc
Confidence 99999999999999999984 333 4577999999999999999999999999999987 889999999999999
Q ss_pred ccccccc-cceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHH
Q 015935 244 LQKTKMQ-LGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHI 322 (398)
Q Consensus 244 L~~~k~~-~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~l 322 (398)
|++++++ ++.++.+++++++..+.++|++++++++++|.+.|++||+++++|++.+++||.++||++++++++.+|+|+
T Consensus 238 le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~i 317 (527)
T 3p9d_B 238 LDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERL 317 (527)
T ss_dssp SSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHH
T ss_pred cccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHH
Confidence 9999999 589999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCCCeEEEEcccce
Q 015935 323 AKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 323 a~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~til~~~~~ 384 (398)
|++|||++++++++ +++.++|+|+.|+++.+|+++|++|+||+++.+|||++||++
T Consensus 318 a~~tGa~iv~~~~~------~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~t 373 (527)
T 3p9d_B 318 ALVTGGEVVSTFDE------PSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGAT 373 (527)
T ss_dssp HHHTCCCCCSTTSC------CTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTC
T ss_pred HHHhCCEEecchhh------CCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCC
Confidence 99999999999866 467899999999999999999999999999999999999997
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=4.9e-71 Score=563.48 Aligned_cols=330 Identities=34% Similarity=0.541 Sum_probs=249.9
Q ss_pred eeecCCCCeEEeccHHHHHhhccccCcHHHHHHHHHHhhhcccCCChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 015935 47 MLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRL 126 (398)
Q Consensus 47 ~i~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~ 126 (398)
||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||||||+++|+++||+++++++.+|+||+.|++||+.
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcccCCccCHHHHHHHHHhhcccCccCCchHHHHHHHHHHHHHhhcccCCCCcccc-CCceeEEecCC
Q 015935 127 AMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKYP-IKGINILKAHG 205 (398)
Q Consensus 127 a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~ls~l~~~av~~v~~~~~~g~~~~~-~~~I~i~~~~G 205 (398)
|++.++++|+++ +++++..|++.|.++|+|+|+||+.++|+++|++++++|+.++.+. .+|...+| +++|+|.+++|
T Consensus 81 A~~~a~~~L~~~-s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~-~~g~~~~di~~~I~V~k~~G 158 (500)
T 3aq1_B 81 AAEKCREILETI-TIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEE-EEDGLKVNVLENIKIEKRAG 158 (500)
T ss_dssp HHHHHHHHHHHH-CEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEEC-CSSSCEECHHHHEEEEEEES
T ss_pred HHHHHHHHHHHh-cCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhccc-ccCCccccccccEEEEEecC
Confidence 999999999997 8898766799999999999999999999999999999999998532 12444677 78899999999
Q ss_pred CCcccceeeeeEEEcccccCCCCCceecCceEEEEeecccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q 015935 206 KSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAG 285 (398)
Q Consensus 206 ~~~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~g 285 (398)
++++||++++|++|++++.|++||++++||||++++++|++++++.++++.++++++++.++++|++++++++++|.+.|
T Consensus 159 ~~~~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g 238 (500)
T 3aq1_B 159 GSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASG 238 (500)
T ss_dssp SCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTC
T ss_pred CCccceEEEeeeEEeecCCCCCCcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEE
Q 015935 286 ANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVI 365 (398)
Q Consensus 286 v~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~ 365 (398)
++|||++++|++.+++||.++||++++++++++|+|||++|||+++++++++ +++++|+|+.|+++++|+++|+
T Consensus 239 ~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~------~~~~LG~a~~v~~~~ig~~~~~ 312 (500)
T 3aq1_B 239 ANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQI------TTEDVGTAGLVEEKEVRGGKMT 312 (500)
T ss_dssp CSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCC------CSTTCEEEEEEEEEECSSSEEE
T ss_pred cCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccC------CHhHCCCceEEEEEEecCeEEE
Confidence 9999999999999999999999999999999999999999999999988764 6788999999999999999999
Q ss_pred EEecCCCCCeEEEEcccce
Q 015935 366 MIKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 366 ~~~g~~~~~~~til~~~~~ 384 (398)
+|+||+++.+|||++||++
T Consensus 313 ~~~g~~~~~~~TI~lrG~t 331 (500)
T 3aq1_B 313 YVTGCQNSKAVTVLLHGGT 331 (500)
T ss_dssp EEEEETTCCCEEEEEEESS
T ss_pred EEECCCCCceEEEEecCCc
Confidence 9999999999999999997
No 23
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=3.5e-62 Score=500.57 Aligned_cols=312 Identities=24% Similarity=0.348 Sum_probs=280.3
Q ss_pred cccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCc----HHHHHHHHHHhhhcc
Q 015935 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP----AAKVLVELAELQDRE 88 (398)
Q Consensus 13 ~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~~ 88 (398)
+..+|.++|.+|+.||..|++++|+||||+||+|||+++.|+++|||||+||+++|+++|| +|+|++++|++|+++
T Consensus 4 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (547)
T 1kp8_A 4 DVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDA 83 (547)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccc
Confidence 5679999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccCHHHHHHHHHhhcccCccCCch
Q 015935 89 VGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDS 168 (398)
Q Consensus 89 ~GDGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~sK~~~~~~ 168 (398)
+||||||+++|+++||+++++++.+|+||..|++||+.|++.++++|+++ +++++ +++.|.++|+++++ ++
T Consensus 84 ~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~--~~e~l~~vA~iS~~------~~ 154 (547)
T 1kp8_A 84 AGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKAL-SVPCS--DSKAIAQVGTISAN------SD 154 (547)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH-CBCCC--SHHHHHHHHHHHTT------SC
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-CcCCC--CHHHHHHHHHHhcc------ch
Confidence 99999999999999999999999999999999999999999999999997 88886 68999999998863 58
Q ss_pred HHHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccc-eeeeeEEEcccccCCC-------CCceecCceEEEE
Q 015935 169 DFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDS-YFLNGYALNAFRAAQG-------MPLRVAPAKIACL 240 (398)
Q Consensus 169 ~~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS-~li~G~vl~~~~~~~~-------~~~~~~~~kIlll 240 (398)
+++++++++|+.++. .+| .|+|. +|+++++| ++++|++|++++.|++ |++.++||||+++
T Consensus 155 ~~i~~liadAv~~V~---~dg-------~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~ 222 (547)
T 1kp8_A 155 ETVGKLIAEAMDKVG---KEG-------VITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLA 222 (547)
T ss_dssp HHHHHHHHHHHHHHC---TTS-------EEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECE
T ss_pred hHHHHHHHHHHHHhC---cCC-------cEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEE
Confidence 999999999999983 323 24453 89999999 9999999999999886 5567999999999
Q ss_pred eecccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcC------CeEEe--
Q 015935 241 DFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAG------AIAVR-- 312 (398)
Q Consensus 241 ~~~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~------I~vv~-- 312 (398)
+++++ ++++ +.++++++.+.|++|||++++|++.+++||..|+ |++|+
T Consensus 223 d~~Is-------------~~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~ 278 (547)
T 1kp8_A 223 DKKIS-------------NIRE-----------MLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAP 278 (547)
T ss_dssp ESEEC-------------CGGG-----------THHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECS
T ss_pred cCcCC-------------CHHH-----------HHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEecc
Confidence 99754 3433 3467889999999999999999999999999964 57887
Q ss_pred ---eCChHHHHHHHHHhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCC
Q 015935 313 ---RVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTT 373 (398)
Q Consensus 313 ---~v~~~~L~~la~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~ 373 (398)
++++++|+|||++|||+++++...++. ++++++++|+|+.|++ ++++|++|+||+++
T Consensus 279 ~~~~~rk~~le~ia~~tG~~ii~~~~g~~l-~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~ 338 (547)
T 1kp8_A 279 GFGDRRKAMLQDIATLTGGTVISEEIGMEL-EKATLEDLGQAKRVVI---NKDTTTIIDGVGEE 338 (547)
T ss_dssp SCHHHHHHHHHHHHHHHTCCCEEGGGTCCS-TTCCTTTSEEEEEEEE---CSSCEEEEEECCCH
T ss_pred ccccccHHHHHHHHHHhCCeEecccccCCc-ccCCHHHCCceeEEEE---ccceEEEEcCCCCH
Confidence 889999999999999999997433333 3467889999999986 68999999999875
No 24
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=9.8e-62 Score=497.82 Aligned_cols=312 Identities=26% Similarity=0.360 Sum_probs=278.8
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCc----HHHHHHHHHHhhhc
Q 015935 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP----AAKVLVELAELQDR 87 (398)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~ 87 (398)
++..+|.++|.+|+.||..+++++|+||||+||+|||+++.|+++|||||+||+++|+++|| +|+|++++|++||+
T Consensus 3 k~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~ 82 (543)
T 1we3_A 3 KILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTND 82 (543)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhhe
Confidence 35689999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccCHHHHHHHHHhhcccCccCCc
Q 015935 88 EVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGD 167 (398)
Q Consensus 88 ~~GDGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~sK~~~~~ 167 (398)
++||||||+++|+++||+++++++.+|+||..|++||+.|++.++++|+++ +++++ +++.|.++|+++++
T Consensus 83 e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~--~~~~l~~vA~iS~~------- 152 (543)
T 1we3_A 83 VAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKAL-AIPVE--DRKAIEEVATISAN------- 152 (543)
T ss_dssp HHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHT-CBCCC--SHHHHHHHHHHHHT-------
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cccCC--CHHHHHHhhhhhcC-------
Confidence 999999999999999999999999999999999999999999999999997 88886 68999999998862
Q ss_pred hHHHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccc-eeeeeEEEcccccCCC-------CCceecCceEEE
Q 015935 168 SDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDS-YFLNGYALNAFRAAQG-------MPLRVAPAKIAC 239 (398)
Q Consensus 168 ~~~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS-~li~G~vl~~~~~~~~-------~~~~~~~~kIll 239 (398)
++++++++++|+.++. .+| .|.+. +|+++++| ++++|++|++++.+++ |++.++||||++
T Consensus 153 ~~~i~~li~dAv~~V~---~~g-------~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill 220 (543)
T 1we3_A 153 DPEVGKLIADAMEKVG---KEG-------IITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILI 220 (543)
T ss_dssp CHHHHHHHHHHHHTTC---TTS-------EEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhC---cCC-------cEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEE
Confidence 6899999999999883 223 24443 89999998 9999999999999875 566799999999
Q ss_pred EeecccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHc------CCeEEe-
Q 015935 240 LDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEA------GAIAVR- 312 (398)
Q Consensus 240 l~~~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~------~I~vv~- 312 (398)
++++++ ++++ +.++++++.+.|++|||++++|++.+++||..| +|++|+
T Consensus 221 ~d~~Is-------------~~~~-----------l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~ 276 (543)
T 1we3_A 221 VEKKVS-------------NVRE-----------LLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKA 276 (543)
T ss_dssp ESSCBC-------------CHHH-----------HHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEEC
T ss_pred ECCCcC-------------CHHH-----------HHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEec
Confidence 999754 3433 457789999999999999999999999999996 568888
Q ss_pred ----eCChHHHHHHHHHhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCC
Q 015935 313 ----RVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTT 373 (398)
Q Consensus 313 ----~v~~~~L~~la~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~ 373 (398)
++++++|+|||++|||+++++...++. ++++++++|+|+.|++ +++++++|+||+++
T Consensus 277 ~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l-~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~ 337 (543)
T 1we3_A 277 PGFGDRRKEMLKDIAAVTGGTVISEELGFKL-ENATLSMLGRAERVRI---TKDETTIVGGKGKK 337 (543)
T ss_dssp SSSHHHHHHHHHHHHHHHCCCCBCTTTTCCG-GGCCGGGCEEEEEEEE---CSSCEEEEEECCCH
T ss_pred cchhhhhHHHHHHHHHHhCCceeeccccCCc-ccCCHHHCCCceEEEE---EcCEEEEEcCCCCH
Confidence 789999999999999999997433332 3467789999999985 67999999999865
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.9e-62 Score=502.73 Aligned_cols=313 Identities=22% Similarity=0.329 Sum_probs=251.8
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCc----HHHHHHHHHHhhhc
Q 015935 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP----AAKVLVELAELQDR 87 (398)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~ 87 (398)
++..+|.++|.+|+.||..+++++|+||||+||+|||+++.|+++|||||+||+++|+++|| +|+|++++|++||+
T Consensus 4 k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~ 83 (545)
T 1iok_A 4 KEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTND 83 (545)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGG
T ss_pred hhhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhcc
Confidence 45689999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccCHHHHHHHHHhhcccCccCCc
Q 015935 88 EVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGD 167 (398)
Q Consensus 88 ~~GDGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~sK~~~~~ 167 (398)
++||||||+++|+++||+++++++.+|+||..|++||+.|++.++++|+++ +++++ +++.|.++|+++++ +
T Consensus 84 e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~--~~e~l~~va~iS~~------~ 154 (545)
T 1iok_A 84 EAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSA-ARPVN--DSSEVAQVGTISAN------G 154 (545)
T ss_dssp GCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CBCCC--STTTTTHHHHHTTT------T
T ss_pred ccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cccCC--CHHHHHHHHHhhcC------C
Confidence 999999999999999999999999999999999999999999999999997 88886 57889999998863 5
Q ss_pred hHHHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccc-eeeeeEEEcccccCCC-------CCceecCceEEE
Q 015935 168 SDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDS-YFLNGYALNAFRAAQG-------MPLRVAPAKIAC 239 (398)
Q Consensus 168 ~~~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS-~li~G~vl~~~~~~~~-------~~~~~~~~kIll 239 (398)
++++++++++|+.++. .+|. |+|. +|+++++| ++++|++|++++.+++ |++.++||||++
T Consensus 155 ~~~i~~li~dAv~~V~---~~g~-------I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill 222 (545)
T 1iok_A 155 ESFIGQQIAEAMQRVG---NEGV-------ITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILL 222 (545)
T ss_dssp CHHHHHHHHHHHHHHC---TTSC-------CCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEE
T ss_pred chhHHHHHHHHHHHhc---cCCe-------EEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEE
Confidence 8999999999999983 3332 3333 89999999 9999999999998875 666799999999
Q ss_pred EeecccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcC------CeEEe-
Q 015935 240 LDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAG------AIAVR- 312 (398)
Q Consensus 240 l~~~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~------I~vv~- 312 (398)
++++++. +++ +.++++++.+.|++|||++++|++.+++||..|+ |++|+
T Consensus 223 ~d~~I~~-------------~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~ 278 (545)
T 1iok_A 223 HEKKLSS-------------LQP-----------MVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKA 278 (545)
T ss_dssp CSSCBCC-------------CCC----------------------CCCCEEEESCBC-----------------CEEEEC
T ss_pred EcCCcCC-------------HHH-----------HHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEec
Confidence 9998753 222 3467888999999999999999999999999964 57877
Q ss_pred ----eCChHHHHHHHHHhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCC
Q 015935 313 ----RVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTT 373 (398)
Q Consensus 313 ----~v~~~~L~~la~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~ 373 (398)
++++++|+|||++|||+++++-..++. ++++++++|+|+.|++ ++++|++|+||+++
T Consensus 279 ~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l-~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~ 339 (545)
T 1iok_A 279 PGFGDRRKAMLQDIAILTGGQVISEDLGMKL-ENVTIDMLGRAKKVSI---NKDNTTIVDGAGEK 339 (545)
T ss_dssp SCCTTHHHHHHHHHHHHHTC----------------CTTSEEEEEEEE---CSSCEEEESCCCCH
T ss_pred chhhhccHHHHHHHHHhcCCeeecccccCCc-ccCCHHHcCcCcEEEE---ecCEEEEEeCCCCH
Confidence 899999999999999999997222221 2357789999999986 67999999999865
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.9e-61 Score=494.03 Aligned_cols=314 Identities=25% Similarity=0.347 Sum_probs=212.5
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCcceeecCCCCeEEeccHHHHHhhccccCcH----HHHHHHHHHhhhc
Q 015935 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPA----AKVLVELAELQDR 87 (398)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~la~~v~sslGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~----a~ll~~~~~~~~~ 87 (398)
++..+|.++|.+|+.|+..+++++|+||||+||+|||+++.|+++|||||+||+++|+++||+ |+|++++|++||+
T Consensus 3 k~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~ 82 (546)
T 3rtk_A 3 KTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDD 82 (546)
T ss_dssp ----------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC-
T ss_pred ceeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhh
Confidence 356899999999999999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhcccCCccCHHHHHHHHHhhcccCccCCc
Q 015935 88 EVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGD 167 (398)
Q Consensus 88 ~~GDGtts~vlL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~l~~~~s~~~~~~~~~~l~~ia~t~l~sK~~~~~ 167 (398)
++||||||+++||++||+++.+++.+|+||..|++||+.|.+.++++|+++ +++++ +++.|.++|+++++
T Consensus 83 e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~-s~~v~--~~e~L~~vA~iS~~------- 152 (546)
T 3rtk_A 83 VAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKG-AKEVE--TKEQIAATAAISAG------- 152 (546)
T ss_dssp ------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHT-CBCCC--SHHHHHHHHHHHHT-------
T ss_pred hhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cccCC--ChHHHHhHeEEeCC-------
Confidence 999999999999999999999999999999999999999999999999997 88887 68899999998863
Q ss_pred hHHHHHHHHHHHHHhhcccCCCCccccCCceeEEecCCCCcccceeeeeEEEcccccCC-------CCCceecCceEEEE
Q 015935 168 SDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQ-------GMPLRVAPAKIACL 240 (398)
Q Consensus 168 ~~~ls~l~~~av~~v~~~~~~g~~~~~~~~I~i~~~~G~~~~dS~li~G~vl~~~~~~~-------~~~~~~~~~kIlll 240 (398)
++.+++++++|+.++. .+| .|.|.+.. +...+|++++|++|++++.|+ .|++.++||||+++
T Consensus 153 ~~~i~~liadAv~~V~---~dg-------vI~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~ 221 (546)
T 3rtk_A 153 DQSIGDLIAEAMDKVG---NEG-------VITVEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLV 221 (546)
T ss_dssp CHHHHHHHHHHHHHSC---TTS-------EEEEECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEB
T ss_pred chHHHHHHHHHHHHhc---cCC-------ceEEEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEE
Confidence 6789999999999883 333 24555433 445799999999999999987 46888999999999
Q ss_pred eecccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcC------CeEEe--
Q 015935 241 DFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAG------AIAVR-- 312 (398)
Q Consensus 241 ~~~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~------I~vv~-- 312 (398)
+++++ ++++ +.++++++.+.|++|||++++|++.+++||..|+ +.+|+
T Consensus 222 d~kIs-------------~~~~-----------l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~ 277 (546)
T 3rtk_A 222 SSKVS-------------TVKD-----------LLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAP 277 (546)
T ss_dssp SSEEC-------------CSTT-----------THHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECS
T ss_pred CCccC-------------CHHH-----------HHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccc
Confidence 98643 3433 3467899999999999999999999999999764 45655
Q ss_pred ---eCChHHHHHHHHHhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCCC
Q 015935 313 ---RVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTTS 374 (398)
Q Consensus 313 ---~v~~~~L~~la~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~ 374 (398)
+.++++|+|||++|||+++++..+++. ++++++++|+|+.|+ ++++++++|+||+.+.
T Consensus 278 ~~~~~rk~~le~ia~~tG~~ii~~~~~~~l-~~~~~~~LG~a~~v~---i~~d~~~~i~g~~~~~ 338 (546)
T 3rtk_A 278 GFGDRRKAMLQDMAILTGGQVISEEVGLTL-ENADLSLLGKARKVV---VTKDETTIVEGAGDTD 338 (546)
T ss_dssp SCHHHHHHHHHHHHHHHTCCCBCSSSSCCS-TTCCTTTSEEEEEEE---ECSSCEEEEEECSCHH
T ss_pred cccccchhhHHHHHHHhCCEEeeccccCcc-ccCCHhhCCeeEEEE---EcCCeEEEEcCCCCHH
Confidence 346899999999999999996443333 346788999999998 5899999999998754
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=1.3e-41 Score=300.97 Aligned_cols=171 Identities=28% Similarity=0.391 Sum_probs=149.8
Q ss_pred cccceeeeeEEEcccccCCCCCceecCceEEEEeecccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCe
Q 015935 208 ARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGAN 287 (398)
Q Consensus 208 ~~dS~li~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~ 287 (398)
++||++++|++|++.+.+++||++++||||++++|+|++++++.++++.++++++++.++++|++++++++++|.+.|+|
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~n 80 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPD 80 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCeEccccccccCCcCCCCCCcce-eeeEEEEEEcCeeEEE
Q 015935 288 VILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGS-ADEVVEERVADDDVIM 366 (398)
Q Consensus 288 lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ii~~~~~l~~~~~~~~~~lG~-~~~v~~~~ig~~~~~~ 366 (398)
||+++++|+|.+++||.++||++++++++++|+|||++|||+++++++++ +++++|+ |+.|+++++|+++|++
T Consensus 81 VVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l------~~~~LG~~~~~v~~~~ig~~~~~~ 154 (178)
T 1gml_A 81 VVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEEL------REDDVGTGAGLLEIKKIGDEYFTF 154 (178)
T ss_dssp EEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGC------CGGGSBCCEEEEEEEEETTEEEEE
T ss_pred EEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhC------ChhhhCCcccEEEEEEECCeEEEE
Confidence 99999999999999999999999999999999999999999999999775 6678999 9999999999999999
Q ss_pred EecCCCCCeEEEEcccce
Q 015935 367 IKGTKTTSAYIILGKVPS 384 (398)
Q Consensus 367 ~~g~~~~~~~til~~~~~ 384 (398)
|+||+++.+|||++||++
T Consensus 155 ~~gc~~~~~~TIllRG~~ 172 (178)
T 1gml_A 155 ITDCKDPKACTILLRGAS 172 (178)
T ss_dssp EEEESSTTSCEEEEEC--
T ss_pred EECCCCCCEEEEEEECCC
Confidence 999999999999999986
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=100.00 E-value=1.8e-36 Score=262.87 Aligned_cols=155 Identities=37% Similarity=0.618 Sum_probs=148.2
Q ss_pred eeeEEEcccccCCCCCceecCceEEEEeecccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCC
Q 015935 214 LNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTK 293 (398)
Q Consensus 214 i~G~vl~~~~~~~~~~~~~~~~kIlll~~~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~ 293 (398)
++|++|++.+++++||++++||||++++|+|++++++.++++.++++++++.++++|++++++++++|.+.|+||||+++
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k 80 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQK 80 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESS
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCeEccccccccCCcCCCCCCcceeeeEEEEEEcCeeEEEEecCCCC
Q 015935 294 GIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKTT 373 (398)
Q Consensus 294 ~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~ 373 (398)
+|+|.+++||.++||++++++++++|+|||++|||+++++++++ +++++|+|+.|+++++|+++|++|+||++.
T Consensus 81 ~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l------~~~~LG~~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 81 GIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDL------TPSVLGEAETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp CBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSC------CTTSCEEEEEEEEEEETTEEEEEEESCC--
T ss_pred ccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccC------CcccCccceEEEEEEECCeEEEEEECCCCc
Confidence 99999999999999999999999999999999999999999764 678899999999999999999999999875
Q ss_pred C
Q 015935 374 S 374 (398)
Q Consensus 374 ~ 374 (398)
.
T Consensus 155 ~ 155 (159)
T 1ass_A 155 H 155 (159)
T ss_dssp -
T ss_pred c
Confidence 4
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.15 E-value=2.2e-10 Score=95.01 Aligned_cols=126 Identities=23% Similarity=0.316 Sum_probs=101.8
Q ss_pred eEEEcccccCCCCCc-------eecCceEEEEeecccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeE
Q 015935 216 GYALNAFRAAQGMPL-------RVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANV 288 (398)
Q Consensus 216 G~vl~~~~~~~~~~~-------~~~~~kIlll~~~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~l 288 (398)
|+-|+++|.+|+|.+ .++||.|++.+..++ +.. .+.+.++++.+.|.++
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs-------------~i~-----------~llP~LE~v~~~~~pL 56 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVS-------------NVR-----------ELLPILEQVAQTGKPL 56 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEEC-------------CHH-----------HHHHHHHHHHTTTCCE
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEeccccc-------------CHH-----------HHHHHHHHHHHHCCCE
Confidence 788999988876643 577999999987643 332 3578889999999999
Q ss_pred EEeCCCCCHHHHHHHHHc------CCeEEeeC-----ChHHHHHHHHHhCCeEccccccccCCcCCCCCCcceeeeEEEE
Q 015935 289 ILTTKGIDDMALKYFVEA------GAIAVRRV-----RKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEE 357 (398)
Q Consensus 289 Vl~~~~I~~~al~~l~~~------~I~vv~~v-----~~~~L~~la~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~ 357 (398)
+|.+.+|+.+|+..|.-| ++.+|+.- ++..|++||.+|||++++.-..+++ ++.+.+++|+|+++.+
T Consensus 57 lIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~L-e~~~~~~LG~a~~v~v- 134 (145)
T 1srv_A 57 LIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKL-ENATLSMLGRAERVRI- 134 (145)
T ss_dssp EEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCG-GGCCGGGCEEEEEEEE-
T ss_pred EEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCcc-ccCCHhHCCccCEEEE-
Confidence 999999999999999887 47778764 7899999999999999988766666 4577789999999994
Q ss_pred EEcCeeEEEEec
Q 015935 358 RVADDDVIMIKG 369 (398)
Q Consensus 358 ~ig~~~~~~~~g 369 (398)
..+..+++.|
T Consensus 135 --tkd~TtIv~G 144 (145)
T 1srv_A 135 --TKDETTIVGG 144 (145)
T ss_dssp --CSSCEEEEEE
T ss_pred --cCCCeEEeCC
Confidence 5566666554
No 30
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.14 E-value=2.3e-10 Score=99.43 Aligned_cols=133 Identities=23% Similarity=0.261 Sum_probs=108.0
Q ss_pred ceeeeeEEEcccccCCCCC-------ceecCceEEEEeecccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHH
Q 015935 211 SYFLNGYALNAFRAAQGMP-------LRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLK 283 (398)
Q Consensus 211 S~li~G~vl~~~~~~~~~~-------~~~~~~kIlll~~~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~ 283 (398)
.++++|+-|+++|.+|+|. ..++||.|++.+..++ +.. .+.+.+++..+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs-------------~i~-----------~ilP~LE~~~~ 57 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKIS-------------SLP-----------DLLPLLEKVAG 57 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEEC-------------CHH-----------HHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccC-------------CHH-----------HHHHHHHHHHH
Confidence 4689999999999988764 3578999999887643 332 35688899999
Q ss_pred CCCeEEEeCCCCCHHHHHHHHHc------CCeEEeeC-----ChHHHHHHHHHhCCeEccccccccCCcCCCCCCcceee
Q 015935 284 AGANVILTTKGIDDMALKYFVEA------GAIAVRRV-----RKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSAD 352 (398)
Q Consensus 284 ~gv~lVl~~~~I~~~al~~l~~~------~I~vv~~v-----~~~~L~~la~~tGa~ii~~~~~l~~~~~~~~~~lG~~~ 352 (398)
.|.+++|.+.+|+.+|+..|.-| ++.+|+.- ++..|++||.+|||++++.-..+++ ++.+..++|+|+
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~L-e~~~~~~LG~a~ 136 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVL-REVGLEVLGSAR 136 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCG-GGCCGGGCEEEE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCccc-ccCCHHHCCCcc
Confidence 99999999999999999998877 46777764 5788999999999999988766665 457788999999
Q ss_pred eEEEEEEcCeeEEEEecCC
Q 015935 353 EVVEERVADDDVIMIKGTK 371 (398)
Q Consensus 353 ~v~~~~ig~~~~~~~~g~~ 371 (398)
++. +..+..+++.|..
T Consensus 137 ~v~---vtkd~T~iv~G~g 152 (194)
T 3m6c_A 137 RVV---VSKDDTVIVDGGG 152 (194)
T ss_dssp EEE---ECSSCEEEEEECC
T ss_pred EEE---EcCCceEEecCCC
Confidence 999 4667777777643
No 31
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.07 E-value=1.2e-09 Score=95.24 Aligned_cols=129 Identities=22% Similarity=0.246 Sum_probs=105.3
Q ss_pred eeEEEcccccCCCCCc-------eecCceEEEEeecccccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHCCCe
Q 015935 215 NGYALNAFRAAQGMPL-------RVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGAN 287 (398)
Q Consensus 215 ~G~vl~~~~~~~~~~~-------~~~~~kIlll~~~L~~~k~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~ 287 (398)
+|+-|+++|.+|+|.+ .++||.|++.+..++ +.. .+.+.++++.+.|.+
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs-------------~i~-----------~ilP~LE~v~~~~rp 68 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKIS-------------NIR-----------ELLPVLEGVAKASKP 68 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEEC-------------CHH-----------HHHHHHHHHHTSSCC
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCccC-------------CHH-----------HHHHHHHHHHHhCCC
Confidence 4999999999887643 588999999997653 332 357889999999999
Q ss_pred EEEeCCCCCHHHHHHHHHc------CCeEEeeC-----ChHHHHHHHHHhCCeEccccccccCCcCCCCCCcceeeeEEE
Q 015935 288 VILTTKGIDDMALKYFVEA------GAIAVRRV-----RKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVE 356 (398)
Q Consensus 288 lVl~~~~I~~~al~~l~~~------~I~vv~~v-----~~~~L~~la~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~ 356 (398)
++|.+.+|+.+|+..|.-| ++.+|+.- ++..|++||.+|||++++.-..+++ ++.+..++|+|++|.
T Consensus 69 LlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~L-e~~~~~~LG~a~~V~- 146 (201)
T 3osx_A 69 LVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLEL-EKATLEDLGQAKRVV- 146 (201)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCG-GGCCGGGCEEEEEEE-
T ss_pred eEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCcc-ccCCHhhCCCccEEE-
Confidence 9999999999999998877 46778764 5788999999999999988766665 457788999999999
Q ss_pred EEEcCeeEEEEecCC
Q 015935 357 ERVADDDVIMIKGTK 371 (398)
Q Consensus 357 ~~ig~~~~~~~~g~~ 371 (398)
+..+..+++.|..
T Consensus 147 --vtkd~TtIv~G~G 159 (201)
T 3osx_A 147 --INKDTTTIIDGVG 159 (201)
T ss_dssp --ECSSCEEEEEECC
T ss_pred --EcCCceEEecCCC
Confidence 4667777777643
No 32
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=80.50 E-value=4.1 Score=33.10 Aligned_cols=53 Identities=13% Similarity=0.191 Sum_probs=43.3
Q ss_pred HHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 276 ERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 276 ~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
...+.|.+.|+++|||. ++.+.+.+.|.++||-++.....+.-+.|.....++
T Consensus 67 ~~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp CHHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 34566778899999998 689999999999999999977766666677666665
No 33
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=78.74 E-value=5.2 Score=31.53 Aligned_cols=53 Identities=26% Similarity=0.318 Sum_probs=43.2
Q ss_pred HHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 276 ERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 276 ~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
...+.|.+.|+++|++. ++.+.+.+.|.++||-++.....+.-+.|.....+.
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 45666778899999998 699999999999999999876666666666666665
No 34
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=77.43 E-value=5.9 Score=31.34 Aligned_cols=52 Identities=12% Similarity=0.134 Sum_probs=42.5
Q ss_pred HHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 277 RIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 277 ~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
..+.|.+.|+++|+|. ++.+.+.+.|.++||-++.....+.-+.|.....+.
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 3566778899999999 589999999999999999977666666676666665
No 35
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=76.09 E-value=5.7 Score=31.26 Aligned_cols=53 Identities=19% Similarity=0.212 Sum_probs=41.8
Q ss_pred HHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCCh-HHHHHHHHHhCCeE
Q 015935 277 RIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRK-EDMRHIAKATGATM 330 (398)
Q Consensus 277 ~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~-~~L~~la~~tGa~i 330 (398)
..+.|.+.|+++|+|. ++.+.+.+.|.++||-++..... +.-+.+.....+.+
T Consensus 59 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g~L 112 (120)
T 2wfb_A 59 AAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDGQV 112 (120)
T ss_dssp HHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTTCS
T ss_pred HHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcCCC
Confidence 4566777899999998 59999999999999999997665 55566666655543
No 36
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=66.90 E-value=12 Score=30.35 Aligned_cols=52 Identities=10% Similarity=0.052 Sum_probs=40.6
Q ss_pred HHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 276 ERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 276 ~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
...+.|.+.||++|||. ++.+.+.+.|.+ ||-++.....+.-+.+.....+.
T Consensus 70 ~~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 70 FMLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 34566777899999998 689999999999 99999986645555566655554
No 37
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=65.49 E-value=6 Score=30.89 Aligned_cols=52 Identities=13% Similarity=0.187 Sum_probs=42.1
Q ss_pred HHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 277 RIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 277 ~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
..+.|.+.|+++|+|. ++.+.+.+.|.++||-++.....+.-+.+.....+.
T Consensus 54 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 3455678899999998 589999999999999999977666666677666665
No 38
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=58.74 E-value=23 Score=26.90 Aligned_cols=49 Identities=14% Similarity=0.177 Sum_probs=39.2
Q ss_pred HHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 279 EKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 279 ~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
+.+.+.|+++|+|. ++.+.+.+.|.++ |-++.....+.-+.+.....++
T Consensus 50 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~g~ 98 (105)
T 2qtd_A 50 KSIVKENVNAIICK-NISEENYKKFSKK-IEIYHAEGDDVDKNISLFIEGE 98 (105)
T ss_dssp HHHHHTCCSEEEES-CCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEEC-CCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHcCC
Confidence 55667899999997 6899999999999 9999976666666666665554
No 39
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=44.69 E-value=41 Score=30.82 Aligned_cols=52 Identities=21% Similarity=0.216 Sum_probs=41.2
Q ss_pred HHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeC--C------------------------hHHHHHHHHHhCCe
Q 015935 278 IEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRV--R------------------------KEDMRHIAKATGAT 329 (398)
Q Consensus 278 v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v--~------------------------~~~L~~la~~tGa~ 329 (398)
+++|...+++|||.....++...+.|.+.||-++-.- . .+.++.+++++|-.
T Consensus 77 ~E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~e 154 (326)
T 3psh_A 77 IESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEKK 154 (326)
T ss_dssp HHHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCCH
Confidence 4778899999999876667788888999998877531 1 36789999999964
No 40
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=43.96 E-value=64 Score=25.61 Aligned_cols=51 Identities=10% Similarity=0.111 Sum_probs=37.6
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCH-----HHHHHHHHcCCeEEeeCChHHHHHHHHHhCC
Q 015935 275 KERIEKLLKAGANVILTTKGIDD-----MALKYFVEAGAIAVRRVRKEDMRHIAKATGA 328 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~-----~al~~l~~~~I~vv~~v~~~~L~~la~~tGa 328 (398)
+...+.|.+-.+.+|+.+.+.+| ....+|.+++|.++..-++ ++|.+++|-
T Consensus 30 ~~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk---~~LG~a~G~ 85 (126)
T 2xzm_U 30 HEVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKR---ASLGEYLGH 85 (126)
T ss_dssp HHHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCS---HHHHHHHTC
T ss_pred HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCH---HHHHHHHCC
Confidence 34456677788999999999975 4567888899999865554 445666664
No 41
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=41.92 E-value=76 Score=23.90 Aligned_cols=52 Identities=12% Similarity=0.072 Sum_probs=38.0
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHHH----HHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 275 KERIEKLLKAGANVILTTKGIDDMA----LKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~a----l~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
++..+.|.+-.+.+||.+.+.++.. .+++..++|.++..-++.+ |..++|-.
T Consensus 25 ~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~~e---LG~A~Gk~ 80 (101)
T 3v7q_A 25 DLVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESRAV---LGRSIGKE 80 (101)
T ss_dssp HHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCHHH---HHHHTTSS
T ss_pred hhhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeechHHH---HHhhhCcc
Confidence 3445667777899999999999854 4456778999888766555 56666664
No 42
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=40.07 E-value=75 Score=24.86 Aligned_cols=49 Identities=14% Similarity=0.082 Sum_probs=37.3
Q ss_pred HHHHHHHHCCCeEEEeCCCCCHH-----HHHHHHHcCCeEEeeCChHHHHHHHHHhC
Q 015935 276 ERIEKLLKAGANVILTTKGIDDM-----ALKYFVEAGAIAVRRVRKEDMRHIAKATG 327 (398)
Q Consensus 276 ~~v~~i~~~gv~lVl~~~~I~~~-----al~~l~~~~I~vv~~v~~~~L~~la~~tG 327 (398)
...+.|.+-.+.+||.+.++++. ...+|.+++|.++..-++.+|- .++|
T Consensus 27 ~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~eLG---~a~g 80 (121)
T 2lbw_A 27 EVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQDLG---AAGA 80 (121)
T ss_dssp HHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHHHH---HHHT
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHHHH---HHhC
Confidence 45667777889999999999984 4467888899988776666554 5566
No 43
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=39.97 E-value=76 Score=23.85 Aligned_cols=52 Identities=6% Similarity=0.027 Sum_probs=37.5
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHHHHH----HHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 275 KERIEKLLKAGANVILTTKGIDDMALK----YFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~al~----~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
++..+.|.+-.+.+||.+.+.++.... ++..++|.++..-++.+ |..++|-.
T Consensus 24 ~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~s~~e---LG~a~Gk~ 79 (101)
T 3on1_A 24 EQVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVGNRQM---LGRAIGKH 79 (101)
T ss_dssp HHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHH---HHHHTTSS
T ss_pred HHHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCHHH---HHHHhCCc
Confidence 345566777789999999999985444 56777999887665555 55666664
No 44
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=39.53 E-value=75 Score=22.96 Aligned_cols=51 Identities=16% Similarity=0.233 Sum_probs=36.8
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHHHHH----HHHHcCCeEEeeCChHHHHHHHHHhCC
Q 015935 275 KERIEKLLKAGANVILTTKGIDDMALK----YFVEAGAIAVRRVRKEDMRHIAKATGA 328 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~al~----~l~~~~I~vv~~v~~~~L~~la~~tGa 328 (398)
++..+.+.+-.+.+|+.+.+.++.... ++.+++|.++.--++.+ |..++|-
T Consensus 17 ~~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk~e---LG~a~Gk 71 (82)
T 3v7e_A 17 KQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKK---LGKACGI 71 (82)
T ss_dssp HHHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHH---HHHHHTC
T ss_pred HHHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCHHH---HHHHhCC
Confidence 344566777788999999999986544 45778999888776655 4555554
No 45
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=39.26 E-value=71 Score=28.53 Aligned_cols=52 Identities=15% Similarity=0.241 Sum_probs=39.7
Q ss_pred HHHHHHCCCeEEEeCCCC-CHHHHHHHHHcCCeEEee---CC----hHHHHHHHHHhCCe
Q 015935 278 IEKLLKAGANVILTTKGI-DDMALKYFVEAGAIAVRR---VR----KEDMRHIAKATGAT 329 (398)
Q Consensus 278 v~~i~~~gv~lVl~~~~I-~~~al~~l~~~~I~vv~~---v~----~~~L~~la~~tGa~ 329 (398)
+++|...++||||..... ++...+.|.+.||.++-. -+ .+.++.+++++|-.
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (283)
T 2r79_A 52 AEGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGVP 111 (283)
T ss_dssp HHHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHHHHHHhCCH
Confidence 577889999999997653 577888899999876643 12 45688899999864
No 46
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=37.85 E-value=59 Score=29.59 Aligned_cols=52 Identities=31% Similarity=0.393 Sum_probs=39.1
Q ss_pred HHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCC----hHHHHHHHHHhCCe
Q 015935 278 IEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVR----KEDMRHIAKATGAT 329 (398)
Q Consensus 278 v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~----~~~L~~la~~tGa~ 329 (398)
+++|...++||||.....++...+.|.+.+..++-... .+.++.+++++|-.
T Consensus 89 ~E~I~~l~PDLIi~~~~~~~~~~~~L~~~gp~v~~~~~~~~~~~~i~~lg~~lg~e 144 (311)
T 2wi8_A 89 IEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKE 144 (311)
T ss_dssp HHHHHHHCCSEEEEETTSCHHHHHHHHTTSCEEEECCCGGGHHHHHHHHHHHHTCH
T ss_pred HHHHHhCCCCEEEEcCccCHHHHHHHHhhCCEEEeeCCCcCHHHHHHHHHHHhCCH
Confidence 46778889999998766778888889888865554322 45688889999864
No 47
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=37.39 E-value=1.1e+02 Score=23.06 Aligned_cols=52 Identities=13% Similarity=0.126 Sum_probs=37.2
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHHH----HHHHHHcCCeEEe-eCChHHHHHHHHHhCCe
Q 015935 275 KERIEKLLKAGANVILTTKGIDDMA----LKYFVEAGAIAVR-RVRKEDMRHIAKATGAT 329 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~a----l~~l~~~~I~vv~-~v~~~~L~~la~~tGa~ 329 (398)
++..+.|.+-.+.+||.+.+.++.. .+++.+++|.++. .-++.+ |..++|-.
T Consensus 28 ~~v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~e---LG~a~Gk~ 84 (104)
T 4a18_G 28 KSTIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVE---LGTACGKY 84 (104)
T ss_dssp HHHHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHH---HHHHTTCS
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHH---HHHHhCCc
Confidence 4556777778899999999999844 3456667999886 556655 55566643
No 48
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=36.49 E-value=68 Score=28.07 Aligned_cols=52 Identities=15% Similarity=0.161 Sum_probs=38.6
Q ss_pred HHHHHHCCCeEEEeCCC-CCHHHHHHHHHcCCeEEee-C---Ch----HHHHHHHHHhCCe
Q 015935 278 IEKLLKAGANVILTTKG-IDDMALKYFVEAGAIAVRR-V---RK----EDMRHIAKATGAT 329 (398)
Q Consensus 278 v~~i~~~gv~lVl~~~~-I~~~al~~l~~~~I~vv~~-v---~~----~~L~~la~~tGa~ 329 (398)
+++|...++||||.... .++...+.|.+.||.++-- . +. +.++.+++++|-.
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~~i~~lg~~~g~~ 112 (256)
T 2r7a_A 52 SEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQVP 112 (256)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCSCCHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHHhCCH
Confidence 57788999999998654 4677888899999866543 1 22 3588888888864
No 49
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=34.20 E-value=63 Score=25.93 Aligned_cols=52 Identities=12% Similarity=0.119 Sum_probs=38.4
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHH-----HHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 275 KERIEKLLKAGANVILTTKGIDDM-----ALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~-----al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
....+.|.+..+.+|+.+.++++. ...+|.++||.++..-++. +|.+++|-.
T Consensus 38 ~~v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~---eLG~a~G~~ 94 (134)
T 2ale_A 38 NEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRV---ALGRACGVS 94 (134)
T ss_dssp HHHHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESCHH---HHHHHTTCS
T ss_pred hHHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECCHH---HHHHHhCCC
Confidence 345667777788999999999985 5677888999988775555 455666653
No 50
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=33.73 E-value=79 Score=27.61 Aligned_cols=52 Identities=17% Similarity=0.213 Sum_probs=39.6
Q ss_pred HHHHHHCCCeEEEeCCCCC-HHHHHHHHHcCCeEEee---C----ChHHHHHHHHHhCCe
Q 015935 278 IEKLLKAGANVILTTKGID-DMALKYFVEAGAIAVRR---V----RKEDMRHIAKATGAT 329 (398)
Q Consensus 278 v~~i~~~gv~lVl~~~~I~-~~al~~l~~~~I~vv~~---v----~~~~L~~la~~tGa~ 329 (398)
+++|...++||||...... +...+.|.+.||-++-. - -.+.++.+++++|-.
T Consensus 52 ~E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (255)
T 3md9_A 52 AEGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVATALHQT 111 (255)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHHHHHhCCH
Confidence 5788999999999987654 56778899999877643 1 234578899999964
No 51
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=32.46 E-value=49 Score=29.04 Aligned_cols=52 Identities=10% Similarity=0.144 Sum_probs=37.4
Q ss_pred HHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEe--eCC----hHHHHHHHHHhCCe
Q 015935 278 IEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVR--RVR----KEDMRHIAKATGAT 329 (398)
Q Consensus 278 v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~--~v~----~~~L~~la~~tGa~ 329 (398)
+++|...++||||.....++...+.|.+.+|-++- .-+ .+.++.+++++|-.
T Consensus 53 ~E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~~g~~ 110 (260)
T 2q8p_A 53 VEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNRK 110 (260)
T ss_dssp HHHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHHhCCh
Confidence 46788889999998766666677888888866543 212 35677888888864
No 52
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=31.80 E-value=65 Score=29.93 Aligned_cols=52 Identities=15% Similarity=0.097 Sum_probs=36.5
Q ss_pred HHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeC-C----------hHHHHHHHHHhCCe
Q 015935 278 IEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRV-R----------KEDMRHIAKATGAT 329 (398)
Q Consensus 278 v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v-~----------~~~L~~la~~tGa~ 329 (398)
+++|...++||||....-.+...+.+.+.||.++--- . .+.++.+++++|-.
T Consensus 89 ~E~Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~~~~~~~~~~~~~~~i~~lG~~lG~e 151 (346)
T 2etv_A 89 LESLITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLSYGNLGTFEDEDLFRSIELAGXILGRE 151 (346)
T ss_dssp HHHHHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEECCCCTTCSCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEecCccCcccHHHHHHHHHHHHHHcCCH
Confidence 4677888999999876533455666777787766431 1 46688889999864
No 53
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=30.81 E-value=66 Score=27.97 Aligned_cols=51 Identities=10% Similarity=0.233 Sum_probs=35.7
Q ss_pred HHHHHHCCCeEEEeCC-CCCHHHHHHHHHcCCeEEeeC--C----hHHHHHHHHHhCC
Q 015935 278 IEKLLKAGANVILTTK-GIDDMALKYFVEAGAIAVRRV--R----KEDMRHIAKATGA 328 (398)
Q Consensus 278 v~~i~~~gv~lVl~~~-~I~~~al~~l~~~~I~vv~~v--~----~~~L~~la~~tGa 328 (398)
+++|...++||||... ..++...+.|.+.||.++-.- + .+.++.+++++|-
T Consensus 50 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg~ 107 (245)
T 1n2z_A 50 LERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQ 107 (245)
T ss_dssp HHHHHHTCCSEEEECTTTSCHHHHHHHHHHTCCEEECCCCSHHHHHHHHHHHGGGCSC
T ss_pred HHHHhccCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHHHhCC
Confidence 4778888999999863 467778888998887776421 1 2346666666664
No 54
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=30.23 E-value=93 Score=24.87 Aligned_cols=52 Identities=15% Similarity=0.186 Sum_probs=37.1
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHHHH-----HHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 275 KERIEKLLKAGANVILTTKGIDDMAL-----KYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~al-----~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
....+.|.+-.+.+||.+.+.++.-. ++|.+++|.++..-++.+ |..++|-.
T Consensus 47 ~~v~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v~sk~e---LG~a~G~~ 103 (135)
T 2aif_A 47 NEATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFVRSKVA---LGRACGVS 103 (135)
T ss_dssp HHHHHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEESCHHH---HHHHTTCS
T ss_pred HHHHHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEECCHHH---HHHHhCCC
Confidence 34456666677899999999988632 567788999987766654 55666654
No 55
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=30.10 E-value=1.3e+02 Score=23.30 Aligned_cols=51 Identities=16% Similarity=0.143 Sum_probs=37.4
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHH----HHHHHHHcCCeEEee-CChHHHHHHHHHhCC
Q 015935 275 KERIEKLLKAGANVILTTKGIDDM----ALKYFVEAGAIAVRR-VRKEDMRHIAKATGA 328 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~----al~~l~~~~I~vv~~-v~~~~L~~la~~tGa 328 (398)
++.++.|.+-.+.+||.+.+.++. ..+++..++|.++.. -+..+| ..++|-
T Consensus 32 ~~t~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eL---G~A~Gk 87 (112)
T 3iz5_f 32 KTVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDL---GTACGK 87 (112)
T ss_dssp HHHHHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTH---HHHHCT
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHH---HHHhCC
Confidence 455677777889999999999984 455678889988876 566664 445554
No 56
>1p90_A NAFY protein, hypothetical protein; ribonuclease H motif, protein binding; 1.80A {Azotobacter vinelandii} SCOP: c.55.5.2
Probab=29.94 E-value=70 Score=25.92 Aligned_cols=46 Identities=15% Similarity=0.235 Sum_probs=33.8
Q ss_pred CCCeEEEeCCCCCHHHHHHHHHcCCeEEeeC-C---hHHHHHHHHHhCCeE
Q 015935 284 AGANVILTTKGIDDMALKYFVEAGAIAVRRV-R---KEDMRHIAKATGATM 330 (398)
Q Consensus 284 ~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v-~---~~~L~~la~~tGa~i 330 (398)
.||++|||. +|.+.+...|.++||-++.-. . .+.++++.....+.+
T Consensus 66 ~g~~vvi~~-~iG~~a~~~L~~~GI~v~~~~~~~~i~eal~~l~~~L~~~~ 115 (145)
T 1p90_A 66 QDCQVLYVV-SIGGPAAAKVVRAGIHPLKKPKGCAAQEAIAELQTVMAGSP 115 (145)
T ss_dssp TTCSEEEES-BCCHHHHHHHHHTTCEEEECTTCEEHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEC-CCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHhcCCC
Confidence 389999998 799999999999999999873 2 344444444443443
No 57
>2pw9_A Putative formate dehydrogenase accessory protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Desulfotalea psychrophila LSV54} SCOP: c.97.1.5
Probab=27.87 E-value=64 Score=29.26 Aligned_cols=40 Identities=20% Similarity=0.293 Sum_probs=29.6
Q ss_pred HHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCC
Q 015935 276 ERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVR 315 (398)
Q Consensus 276 ~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~ 315 (398)
++++|....|+++|++-..-...+.++..+.||+.+..++
T Consensus 206 EmV~Kaa~aGIpvlvS~SApTslAV~lA~~~giTLiGf~R 245 (268)
T 2pw9_A 206 DMVLKCARIGIPIIMSRTSPSSLGLALAKRSGATLVAYSR 245 (268)
T ss_dssp HHHHHHHHHTCCEEEESSCBCHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEcccccHHHHHHHHHcCCEEEEEec
Confidence 4467777777777777777777777777777777776654
No 58
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=27.50 E-value=1.1e+02 Score=23.77 Aligned_cols=51 Identities=18% Similarity=0.192 Sum_probs=36.9
Q ss_pred HHHHHHHHCCCeEEEeCCCCCHH-----HHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 276 ERIEKLLKAGANVILTTKGIDDM-----ALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 276 ~~v~~i~~~gv~lVl~~~~I~~~-----al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
...+.|.+-.+.+|+.+.++++. ...+|.+++|.++..-++.+| ..++|-.
T Consensus 36 ~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eL---G~a~G~~ 91 (120)
T 1xbi_A 36 EVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQDL---GKAAGLE 91 (120)
T ss_dssp HHHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEESCHHHH---HHHTTCS
T ss_pred HHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeCCHHHH---HHHhCCC
Confidence 44566777789999999999774 456788889998777776655 4555543
No 59
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=26.54 E-value=84 Score=29.53 Aligned_cols=66 Identities=17% Similarity=0.195 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HC------CCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 260 PRELEKIRQREADMTKERIEKLL-KA------GANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 260 ~~~l~~~~~~E~~~l~~~v~~i~-~~------gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
++++++|. +.+++++++.+. +. ++.+++...+- ...+.++.+.|+-++..-...++....+..|.+
T Consensus 226 p~~f~ef~---~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~-~~~l~~l~~~g~d~i~~d~~~dl~~a~~~~g~~ 298 (367)
T 1r3s_A 226 PQLFNKFA---LPYIRDVAKQVKARLREAGLAPVPMIIFAKDG-HFALEELAQAGYEVVGLDWTVAPKKARECVGKT 298 (367)
T ss_dssp HHHHHHHT---HHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC-GGGHHHHTTSSCSEEECCTTSCHHHHHHHHCSS
T ss_pred HHHHHHHh---HHHHHHHHHHHhhhhccccCCCCCeEEEcCCc-HHHHHHHHhcCCCEEEeCCCCCHHHHHHHcCCC
Confidence 55666554 477888888887 65 56666655553 667889999998888776667888888888874
No 60
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=26.53 E-value=1.8e+02 Score=21.97 Aligned_cols=52 Identities=12% Similarity=0.170 Sum_probs=37.8
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHHH----HHHHHHcCCeEEe-eCChHHHHHHHHHhCCe
Q 015935 275 KERIEKLLKAGANVILTTKGIDDMA----LKYFVEAGAIAVR-RVRKEDMRHIAKATGAT 329 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~a----l~~l~~~~I~vv~-~v~~~~L~~la~~tGa~ 329 (398)
++..+.|.+-.+.+||.+.+.++.. .+++..++|.++. .-++.+ |..++|-.
T Consensus 28 ~~v~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~e---LG~A~Gk~ 84 (105)
T 3u5e_c 28 KSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNE---LGTAVGKL 84 (105)
T ss_dssp HHHHHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHH---HHHHTTCS
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHH---HHHHhCCc
Confidence 4556777778899999999999754 5566778999986 455555 56666753
No 61
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=26.21 E-value=1.8e+02 Score=22.32 Aligned_cols=60 Identities=18% Similarity=0.241 Sum_probs=40.6
Q ss_pred HHHHHHHHHHCCCeEEEeCCC--------CCHHHHHHHHHcCCe----EEeeC--ChHHHHHHHHHhCCeEcccc
Q 015935 274 TKERIEKLLKAGANVILTTKG--------IDDMALKYFVEAGAI----AVRRV--RKEDMRHIAKATGATMVSTF 334 (398)
Q Consensus 274 l~~~v~~i~~~gv~lVl~~~~--------I~~~al~~l~~~~I~----vv~~v--~~~~L~~la~~tGa~ii~~~ 334 (398)
+++.++.+++.+. |++..++ .+..+.++|.+.||- ....+ +.+..+.+...+|..-++.+
T Consensus 5 ~~~~v~~~i~~~~-Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~v 78 (121)
T 3gx8_A 5 IRKAIEDAIESAP-VVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQL 78 (121)
T ss_dssp HHHHHHHHHHSCS-EEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHHHhccCC-EEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeE
Confidence 4667888888775 5555444 457888999999986 22334 44556778888887655544
No 62
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=26.15 E-value=98 Score=28.43 Aligned_cols=51 Identities=18% Similarity=0.116 Sum_probs=37.4
Q ss_pred HHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeC--C----hHHHHHHHHHhCCe
Q 015935 278 IEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRV--R----KEDMRHIAKATGAT 329 (398)
Q Consensus 278 v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v--~----~~~L~~la~~tGa~ 329 (398)
+++|...++||||.... .+...+.|.+.||-++-.- . .+.++.+++++|-.
T Consensus 109 ~E~i~al~PDLIi~~~~-~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg~e 165 (335)
T 4hn9_A 109 TEACVAATPDVVFLPMK-LKKTADTLESLGIKAVVVNPEDQSLLEECITLVGKITNNA 165 (335)
T ss_dssp HHHHHHTCCSEEEEEGG-GHHHHHHHHHTTCCEEEECCCSHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEEeCc-chhHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHHcCCH
Confidence 57888899999998765 5667778888887766532 1 35677888888864
No 63
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=25.34 E-value=1.4e+02 Score=27.02 Aligned_cols=63 Identities=11% Similarity=0.138 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCC----hHHHHHHHHHhCCeEcc
Q 015935 268 QREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVR----KEDMRHIAKATGATMVS 332 (398)
Q Consensus 268 ~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~----~~~L~~la~~tGa~ii~ 332 (398)
++|++++.+.++.|.+ .++.++=......+.....++|.-.+..++ ..+|-.++.-.|+.++-
T Consensus 64 eeE~~Rv~pvi~~l~~--~~v~iSIDT~~~~Va~~al~aGa~iINDVs~g~~d~~m~~~va~~~~~~vl 130 (270)
T 4hb7_A 64 EEELNRVLPVVEAIVG--FDVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIIL 130 (270)
T ss_dssp HHHHHHHHHHHHHHTT--SSSEEEEECSCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHhhc--CCCeEEEECCCHHHHHHHHHhccceeccccccccchhHHHHHHHcCCCeEE
Confidence 4677889999999975 467777777888888888889988888764 35677777778888763
No 64
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=24.36 E-value=1.4e+02 Score=23.18 Aligned_cols=52 Identities=13% Similarity=0.248 Sum_probs=37.3
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHH-----HHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 275 KERIEKLLKAGANVILTTKGIDDM-----ALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~-----al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
.+..+.|.+-.+.+|+.+.+.++. ..++|.+++|.++..-++.+ |..++|-.
T Consensus 35 ~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~e---LG~a~G~~ 91 (120)
T 1vq8_F 35 NETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDD---LGHAAGLE 91 (120)
T ss_dssp HHHHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEESCHHH---HHHHTTCS
T ss_pred HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECCHHH---HHHHhCCC
Confidence 344566777788999999999763 45678888999877777665 45555654
No 65
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=24.30 E-value=1.4e+02 Score=23.27 Aligned_cols=52 Identities=15% Similarity=0.132 Sum_probs=37.2
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHH-----HHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 275 KERIEKLLKAGANVILTTKGIDDM-----ALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~-----al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
.+..+.|.+-.+.+|+.+.+.++. ..++|.+++|.++..-++.+| ..++|-.
T Consensus 34 ~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~sk~eL---G~a~G~~ 90 (124)
T 2fc3_A 34 NETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKRL---GEAAGIE 90 (124)
T ss_dssp HHHHHHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEESCHHHH---HHHTTCS
T ss_pred HHHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEECCHHHH---HHHhCCC
Confidence 344566667788999999999763 456788889998777776654 4555554
No 66
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=22.19 E-value=1.1e+02 Score=23.84 Aligned_cols=39 Identities=13% Similarity=0.156 Sum_probs=26.6
Q ss_pred HHHHHHHHHHCCCeEEEeCCCC-CHHHHHHHHHcCCeEEe
Q 015935 274 TKERIEKLLKAGANVILTTKGI-DDMALKYFVEAGAIAVR 312 (398)
Q Consensus 274 l~~~v~~i~~~gv~lVl~~~~I-~~~al~~l~~~~I~vv~ 312 (398)
..+.++.+.+.|+..|+.+.++ ++.+.+.+.++||-++.
T Consensus 71 v~~~v~e~~~~g~k~v~~~~G~~~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 71 QLSEYNYILSLKPKRVIFNPGTENEELEEILSENGIEPVI 110 (122)
T ss_dssp HGGGHHHHHHHCCSEEEECTTCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCCChHHHHHHHHHcCCeEEC
Confidence 4555677777788766666555 56677777777777664
No 67
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=22.14 E-value=2.5e+02 Score=21.30 Aligned_cols=52 Identities=10% Similarity=0.142 Sum_probs=36.5
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHHHHH----HHHHcCCeEEee-CChHHHHHHHHHhCCe
Q 015935 275 KERIEKLLKAGANVILTTKGIDDMALK----YFVEAGAIAVRR-VRKEDMRHIAKATGAT 329 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~al~----~l~~~~I~vv~~-v~~~~L~~la~~tGa~ 329 (398)
....+.|.+-.+.+||.+.+.++.... +|.+++|.++.. -++.+ |..++|-.
T Consensus 27 ~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk~e---LG~a~G~~ 83 (110)
T 3cpq_A 27 KRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITSLE---LGAVCGKP 83 (110)
T ss_dssp HHHHHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCHHH---HHHHTTCS
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCHHH---HHHHhCCc
Confidence 345566777789999999999876554 566679988776 56555 55566643
No 68
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=21.60 E-value=1.6e+02 Score=23.07 Aligned_cols=52 Identities=13% Similarity=0.183 Sum_probs=37.3
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHH-----HHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 275 KERIEKLLKAGANVILTTKGIDDM-----ALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~-----al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
....+.+.+-.+.+|+.+.+.++. ...+|.+++|..+..-++.+ |..++|-.
T Consensus 37 ~~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~e---LG~a~Gk~ 93 (122)
T 3o85_A 37 NEALKQVNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYVFIGSKNA---LGRACNVS 93 (122)
T ss_dssp HHHHHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEESCHHH---HHHHTTCS
T ss_pred HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHH---HHHHhCCC
Confidence 345566667788999999999763 44567888999877766655 55566654
No 69
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=21.33 E-value=2.2e+02 Score=26.05 Aligned_cols=58 Identities=19% Similarity=0.190 Sum_probs=42.7
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCeEcc
Q 015935 275 KERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVS 332 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ii~ 332 (398)
.+.++.+.+.|+++|....+.+....+.+.+.|+.++-.+...+.-+.+...|+..+.
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~p~~~~~~l~~~gi~vi~~v~t~~~a~~~~~~GaD~i~ 143 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGNDPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVS 143 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESCCHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCCcHHHHHHHHHcCCCEEeeCCCHHHHHHHHHcCCCEEE
Confidence 3456777888999998887777888889999998888766544444455667777654
No 70
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=21.06 E-value=1.3e+02 Score=28.00 Aligned_cols=65 Identities=11% Similarity=0.053 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 260 PRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 260 ~~~l~~~~~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
++++.++. ..+++++++.+.+.|+.+++...+- ...+.++.+.|+-++..-...+++.+.+. |.+
T Consensus 222 p~~f~ef~---~p~~~~i~~~i~~~g~~~i~~~~G~-~~~l~~l~~~g~d~~~~d~~~d~~~~~~~-g~~ 286 (359)
T 2inf_A 222 QADYRTYI---KPVMNRIFSELAKENVPLIMFGVGA-SHLAGDWHDLPLDVVGLDWRLGIDEARSK-GIT 286 (359)
T ss_dssp HHHHHHHT---HHHHHHHHHHHGGGCSCEEEECTTC-GGGHHHHHTSSCSEEECCTTSCHHHHHHT-TCC
T ss_pred HHHHHHHh---HHHHHHHHHHHHHcCCcEEEEcCCc-HHHHHHHHHhCCCEEEeCCCCCHHHHHHc-CCC
Confidence 44555443 4778888888887777666655554 55777888899888876545578888887 764
No 71
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=20.93 E-value=2.3e+02 Score=26.06 Aligned_cols=64 Identities=20% Similarity=0.261 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCCh----HHHHHHHHHhCCeEcc
Q 015935 268 QREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRK----EDMRHIAKATGATMVS 332 (398)
Q Consensus 268 ~~E~~~l~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~----~~L~~la~~tGa~ii~ 332 (398)
++|.+++.+.++.|.+. .++.|+=......+.....+.|.-.+..++. +++-.++.-.|+.++-
T Consensus 67 ~eE~~Rv~pvI~~l~~~-~~vpiSIDT~~~~Va~aAl~aGa~iINDVsg~~~d~~m~~v~a~~~~~vvl 134 (314)
T 2vef_A 67 EEEIQRVVPVIKAIRKE-SDVLISIDTWKSQVAEAALAAGADLVNDITGLMGDEKMPHVVAEARAQVVI 134 (314)
T ss_dssp HHHHHHHHHHHHHHHHH-CCCEEEEECSCHHHHHHHHHTTCCEEEETTTTCSCTTHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHhh-CCceEEEeCCCHHHHHHHHHcCCCEEEECCCCCCChHHHHHHHHcCCCEEE
Confidence 46778899999999864 2566666777888888888889999988765 5788888889988765
No 72
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8
Probab=20.68 E-value=39 Score=30.71 Aligned_cols=42 Identities=24% Similarity=0.336 Sum_probs=35.0
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCCh
Q 015935 275 KERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRK 316 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~ 316 (398)
.+.++.+.+.|..|++....||+.+++.|.+.+=--+..|.+
T Consensus 215 sp~~E~~k~kg~EVL~l~d~iDe~~i~~L~ef~gk~l~sv~k 256 (268)
T 3pry_A 215 SAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTK 256 (268)
T ss_dssp CHHHHHHHTTTCCEEECCSTTHHHHHHHHCEETTEEEEETTC
T ss_pred ChHHHHHHHcCceEEEeCCchHHHHHHHHHhcCCceeeeccc
Confidence 467899999999999999999999999999886455555544
No 73
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=20.54 E-value=2.4e+02 Score=25.90 Aligned_cols=56 Identities=16% Similarity=0.194 Sum_probs=41.0
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHHHHHHHHHcCCeEEeeCC-hHHHHHHHHHhCCeEc
Q 015935 275 KERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVR-KEDMRHIAKATGATMV 331 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~-~~~L~~la~~tGa~ii 331 (398)
.+.++.+.+.|+++|....+.++...+.+.+.++.++..+. .++.++ +.-.|+..+
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~p~~~~~~l~~~g~~v~~~v~s~~~a~~-a~~~GaD~i 148 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGNPTKYIRELKENGTKVIPVVASDSLARM-VERAGADAV 148 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCSCE
T ss_pred HHHHHHHHHCCCCEEEECCCCcHHHHHHHHHcCCcEEEEcCCHHHHHH-HHHcCCCEE
Confidence 45567778889999998888888889999999988887654 444444 444566544
No 74
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=20.43 E-value=2e+02 Score=26.41 Aligned_cols=72 Identities=14% Similarity=0.055 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEeCCCCCHHHHHHHHHcCCeEEeeCChHHHHHHHHHhCCeEccccc
Q 015935 260 PRELEKIRQREADMTKERIEKLLKA-GANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFA 335 (398)
Q Consensus 260 ~~~l~~~~~~E~~~l~~~v~~i~~~-gv~lVl~~~~I~~~al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ii~~~~ 335 (398)
++++++|. +.+++++++.+++. |+++++...+- ...+..+.+.|+-++..-...+++...+..+..+...++
T Consensus 208 p~~f~ef~---~p~~k~i~~~i~~~~g~~~i~~~~g~-~~~l~~l~~~g~d~~~~d~~~dl~~~~~~~~~~l~Gn~d 280 (338)
T 2eja_A 208 LEDYGEYV---YPYVNYLISELKDFSDTPVIYFFRGS-SSFIDLAVDYRADALSVDWSVDIPELFKIYDKGFQGNLE 280 (338)
T ss_dssp HHHHHHHT---HHHHHHHHHHHHHHCCCCEEEEESSH-HHHHHHHTTSCCSEEECCTTSCHHHHHHHCCSEEECCBC
T ss_pred HHHHHHHh---HHHHHHHHHHHhhcCCCCEEEEcCCc-HHHHHHHHHcCCCEEEeCCCCCHHHHHHhCCeEEEECCC
Confidence 55666554 47788888888876 77777665555 778888888887777653344666666554444555443
No 75
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=20.02 E-value=1.3e+02 Score=23.35 Aligned_cols=52 Identities=15% Similarity=0.176 Sum_probs=36.3
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCHH-----HHHHHHHcCCeEEeeCChHHHHHHHHHhCCe
Q 015935 275 KERIEKLLKAGANVILTTKGIDDM-----ALKYFVEAGAIAVRRVRKEDMRHIAKATGAT 329 (398)
Q Consensus 275 ~~~v~~i~~~gv~lVl~~~~I~~~-----al~~l~~~~I~vv~~v~~~~L~~la~~tGa~ 329 (398)
.+..+.|.+-.+.+|+.+.+.++. ..++|.+++|.++..-++.+| ..++|-.
T Consensus 33 ~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~eL---G~a~G~~ 89 (119)
T 1rlg_A 33 NETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDL---GRAVGIE 89 (119)
T ss_dssp HHHHHHHTTTCCSEEEEESCCSCSTTTTHHHHHHHHHTCCEEEESCHHHH---HHHTTCS
T ss_pred HHHHHHHHcCCCcEEEEeCCCChHHHHHHHHHHHHHcCCCEEEeCCHHHH---HHHhCCC
Confidence 344556666678999999988763 456788889998777766654 5555554
Done!