Your job contains 1 sequence.
>015939
MVRQELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILST
KEFVPNLTLHRLIAHWSHQLTVPEQEVRVWIEKIKSENESENSCVDYLVKVAKFATGCEA
NRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLNRLILNTYNC
LPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALND
AILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGRL
ALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVVNSNGLTKLLLVM
QSENEGIVRKMCGDLVKVLGKASGLGNYQTKTAHIMPY
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015939
(398 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 733 1.6e-72 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 719 4.8e-71 1
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 408 4.3e-38 1
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 327 1.6e-29 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 332 2.6e-29 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 202 6.6e-28 2
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 198 3.7e-26 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 299 9.4e-26 1
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 288 2.2e-25 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 291 7.0e-25 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 288 1.8e-24 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 280 7.4e-23 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 277 2.2e-22 1
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 206 7.2e-22 2
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 274 7.6e-22 1
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 260 1.4e-20 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 187 1.5e-20 2
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 258 3.0e-20 1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 202 6.9e-20 2
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 257 1.5e-19 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 244 7.2e-19 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 157 2.7e-18 2
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 243 2.8e-18 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 150 3.3e-18 2
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 242 1.1e-17 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 193 5.3e-16 2
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 168 8.5e-14 2
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 195 1.0e-12 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 192 2.4e-12 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 170 1.3e-11 2
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 143 1.8e-11 2
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 134 1.8e-10 2
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 144 1.8e-10 2
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 157 5.5e-10 2
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 127 1.5e-09 2
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 163 3.5e-09 1
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 164 4.1e-09 2
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 163 9.0e-09 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 120 3.4e-08 2
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 115 5.4e-08 3
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 148 5.1e-07 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 109 5.4e-07 2
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 145 6.7e-07 1
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 118 9.7e-07 2
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 143 1.9e-06 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 142 2.4e-06 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 138 3.1e-06 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 137 3.3e-06 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 134 3.6e-06 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 133 6.7e-06 1
TAIR|locus:2075457 - symbol:AT3G02840 species:3702 "Arabi... 133 7.2e-06 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 132 1.4e-05 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 130 2.3e-05 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 128 3.8e-05 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 131 3.9e-05 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 126 6.4e-05 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 126 6.4e-05 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 125 8.3e-05 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 124 0.00021 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 120 0.00029 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 121 0.00046 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 121 0.00047 1
TAIR|locus:2827868 - symbol:CSI1 "cellulose synthase-inte... 124 0.00069 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 117 0.00072 1
WB|WBGene00000500 - symbol:chn-1 species:6239 "Caenorhabd... 112 0.00080 1
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 165/413 (39%), Positives = 257/413 (62%)
Query: 5 ELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFV 64
E YI VP+ F+CPISLDVM+SPVSLCTGVTYDR+SIQ WL+ G++TCPATMQ+L TK+FV
Sbjct: 7 ETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFV 66
Query: 65 PNLTLHRLIAHWS------HQ----LTVPEQEVRVWXXXXXXXXXXXXXCVDYLVKVAKF 114
PNLTL RLI WS H + P V ++ L+K+ +F
Sbjct: 67 PNLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSLENLMKIVRF 126
Query: 115 ATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLNRLI 174
++NR FL+ FV + ++ R ++++I ++ A+R+L+ I + +E+L+ L+
Sbjct: 127 VKDSDSNREFLSKKMEFVPMLVDII-RTKKTKIELVIMAIRILDSIKVD---RERLSNLM 182
Query: 175 L--NTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKL 232
L + +CL L ++ GNL+SKI S+++LD IS D +SK + E + +L+ + + +
Sbjct: 183 LANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSISI 242
Query: 233 AE--DQALNDAILSILITLSVYRSVKAQLVEL-GMVQILTRILSDSRTQILTVEKSIKML 289
E D +L +A LS LIT+S + V+++L+ + +I +L+++ T + EKS+K+L
Sbjct: 243 TESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEKSLKLL 302
Query: 290 SIVATCSEGRLAL--SEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYK-DARVKEA 346
+++ EGRL + + C VV++++KV TA E AV ++W +C V++ D V+E
Sbjct: 303 ETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDKTVEET 362
Query: 347 VVNSNGLTKLLLVMQSENEGIVRKMCGDLVKVLG-KASGLGNYQTKTAHIMPY 398
V SNG+TKLL+V+QS +VR+M DL+KVL +S L Y+TKT HIMP+
Sbjct: 363 VERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFNSSALAAYETKTTHIMPF 415
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 164/411 (39%), Positives = 241/411 (58%)
Query: 1 MVRQELYIA-VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILS 59
M +LYI VP F+CPISLDVMKSPVSL TGVTYDR SIQ WL+ G++TCPATMQIL
Sbjct: 1 MRSDDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQ 60
Query: 60 TKEFVPNLTLHRLIAHWSHQLT------VPEQEVRVWXXXXXXXXXXXXXCVDYLVKVAK 113
KEFVPNLTLHRLI HWS + PE + D K+ +
Sbjct: 61 NKEFVPNLTLHRLIDHWSDSINRRADSESPESDTPTRDEINAAIERFRIEN-DARSKILR 119
Query: 114 FATGCEANRRFLASYGGFVEAVFGVLNRKRR---SEIAVLESAVRVLNLIVNENGVKEKL 170
FA + NR FLA FV + +++ R S++ ++ AV++L++I + + +L
Sbjct: 120 FARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIFDRRRL 179
Query: 171 NRLIL-NTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDY 229
+ LIL N +CL F +++ GN KI +L+ I++D ESK + + E L++ +
Sbjct: 180 SNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTEIIKL 239
Query: 230 LKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKML 289
+ D +L +A LS+LI ++ + VK L+ +V LT +L+D T + EK +K+L
Sbjct: 240 ISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVTEKCLKLL 299
Query: 290 SIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVVN 349
+++C EGR + + C VV ++MKV A E AV V+WS+C ++K+ + ++AV+
Sbjct: 300 EAISSCKEGRSEICDGV-CVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKKAQDAVIR 358
Query: 350 SNGLTKLLLVMQSENEGIVRKMCGDLVKV--LGKASGLGNYQTKTAHIMPY 398
NG+TK+LL++QS VR M DL+KV + S L Y+TKT HIMP+
Sbjct: 359 INGVTKILLLLQSNCSLTVRHMLTDLLKVFKVNSRSCLSVYETKTTHIMPF 409
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 101/304 (33%), Positives = 177/304 (58%)
Query: 106 DYLVKVAKFATGCEANRRFLASYGGFVEAVFGVLNR-----KRRSEIAVLESAVRVLNLI 160
+ L K+ +F + NR FLA FV+ + ++N+ ++ V++ AV++L+ I
Sbjct: 117 EVLSKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTI 176
Query: 161 VNENGVKEKLNRLIL-NTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLET 219
++ + + + LIL N + L + + + + GN++ KI +L+ I++D ESK + E
Sbjct: 177 RSKVSDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAER 236
Query: 220 ENLLSALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQI 279
+ L++ L + D +L ++ LS LI +S + VK L+ ++ +T++LSDS + +
Sbjct: 237 DGLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSL 296
Query: 280 -LTV-EKSIKMLSIVATCSEGRLAL-SEEASCAGRVVERVMKVGKTAREDAVVVIWSMCC 336
++V EK +K+L I+A+ EGR + + C VV+++MKV A E AV V+WS+
Sbjct: 297 SVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVSY 356
Query: 337 VYKDARVKEAVVNSNGLTKLLLVMQSENEGIVRKMCGDLVKV--LGKASGLGNYQTKTAH 394
++K+ + EAV + NG+TK+LL++QS VR+M DL+KV + S L Y TKT H
Sbjct: 357 LFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFKVNSRSCLSAYDTKTTH 416
Query: 395 IMPY 398
IMP+
Sbjct: 417 IMPF 420
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 76/191 (39%), Positives = 108/191 (56%)
Query: 1 MVRQELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILST 60
M + +L I VP FRCPISLDVMKSPVSLCTGVTYDR+SIQ WL+ G++TCPATMQIL
Sbjct: 1 MRKDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQN 60
Query: 61 KEFVPNLTLHRLIAHWSH-----------QLTVPEQEVRVWXXXXXXXXXXXXXCVDYLV 109
K+F+PN TL RLI WS +L P ++ + L
Sbjct: 61 KDFIPNRTLQRLIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVKIEKEERDDREVLS 120
Query: 110 KVAKFATGCEANRRFLASYGGFVEAVFGVLNR-----KRRSEIAVLESAVRVLNLIVNEN 164
K+ +F + NR FLA FV+ + ++N+ ++ V++ AV++L+ I ++
Sbjct: 121 KIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRSKV 180
Query: 165 GVKEKLNRLIL 175
+ + + LIL
Sbjct: 181 SDRRRFSNLIL 191
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 100/402 (24%), Positives = 193/402 (48%)
Query: 4 QELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEF 63
+E+ I +P+ F+CPIS ++MK PV + +G+TYDR +I+ W ESG+ TCP T +L++ E
Sbjct: 27 EEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQ 86
Query: 64 VPNLTLHRLIAHW-SHQL-----TVPEQEVRVWXX---------XXXXXXXXXXXCVDYL 108
+PN T+ R+I W L +P V V C++ +
Sbjct: 87 IPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMV 146
Query: 109 VKVAKFATGCEANRRFLASYG-GFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVK 167
K+ + E NR+ + G G V V + + +LE V VL ++ G++
Sbjct: 147 TKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWML-PIGLE 205
Query: 168 EKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALF 227
+ +++N L +E+LR G+ ++ + I + + L N + L N + F
Sbjct: 206 GQSKLTTTSSFNRL---VELLRNGDQNA---AFLIKELLEL-NVTHVHALTKINGVQEAF 258
Query: 228 DYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIK 287
+ D ++++SI + + ++ +EL +V I +L DS + EK++
Sbjct: 259 -MKSINRDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDSENSVC--EKALT 315
Query: 288 MLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAV 347
+L+++ EGR + +V++++K+ + ++D V V+W +C + V+EA+
Sbjct: 316 VLNVICETKEGREKVRRNKLVIPILVKKILKISE--KKDLVSVMWKVCKSGDGSEVEEAL 373
Query: 348 VNSNGLTKLLLVMQSE-NEGIVRKMCGDLVKVLGKASGLGNY 388
KL++++Q EG K+ +L+K++ K + +
Sbjct: 374 -RLGAFKKLVVMLQVGCGEGTKEKVT-ELLKMMNKVMKMNGF 413
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 332 (121.9 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 99/340 (29%), Positives = 169/340 (49%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P FRCPISL++MK PV + TG TY+RSSIQ WL++GH TCP + + L PN L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 70 HRLIAHW--SHQLTVPEQEVRVWXXXXXXXXXXXXXCVDYLVKVAKFATGCEANRRFLAS 127
LIA W S+ + +P+ + L + K A G +R A
Sbjct: 308 KSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAG 367
Query: 128 YGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLI---VNENGVKEKLNRLILNTYN----- 179
+ A V NR +E + V +L+ E+ V LN L +N N
Sbjct: 368 ELRLL-AKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLN-LSINEGNKGAIV 425
Query: 180 ---CLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQ 236
+ +E+L+ G+++++ + L S+S+ +E+K + + AL L+ +
Sbjct: 426 DAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAI-GAAGAIQALISLLEEGTRR 484
Query: 237 ALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCS 296
DA +I L +Y+ K++ V+ G+V LTR+L D+ + V++++ +L+I++T
Sbjct: 485 GKKDAATAIF-NLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGM--VDEALAILAILSTNQ 541
Query: 297 EGRLALSEEASCAGRVVERVMKVGKTA-REDAVVVIWSMC 335
EG+ A++E S V+ +++ G RE+A ++W +C
Sbjct: 542 EGKTAIAEAESIP--VLVEIIRTGSPRNRENAAAILWYLC 579
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 202 (76.2 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 38/70 (54%), Positives = 47/70 (67%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P++F CPISL+ M+ PV+LCTG TY+RS+I W GH TCP TMQ L PN TL
Sbjct: 60 IPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTL 119
Query: 70 HRLIAHWSHQ 79
H+LI W Q
Sbjct: 120 HQLIYTWFSQ 129
Score = 177 (67.4 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 51/200 (25%), Positives = 108/200 (54%)
Query: 183 LFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDAI 242
L +++L +G++++KI +++ + + + ++ + +LL L ++L +D+ + +
Sbjct: 231 LMVDMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGL---MRLVKDRRRRNGV 287
Query: 243 ---LSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGR 299
L++L ++SV++ V+ LV +G V L +L + L E ++ +L + SEGR
Sbjct: 288 SPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECL--ESALFVLDSLCLESEGR 345
Query: 300 LALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVVNSNGLT-KLLL 358
+AL + + V +MKV + A+ ++WS+C + + AV GL KLLL
Sbjct: 346 IALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECSSLAV--EVGLAAKLLL 403
Query: 359 VMQSENEGIVRKMCGDLVKV 378
V+QS + +++ +L+K+
Sbjct: 404 VIQSGCDPALKQRSAELLKL 423
Score = 64 (27.6 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 32/156 (20%), Positives = 74/156 (47%)
Query: 138 VLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLNRLILNTYNCLPLFLEILREGNLDSKI 197
V +R+RR+ ++ A+ +L + V+ L R+ +P +++L +++
Sbjct: 278 VKDRRRRNGVS---PALTLLKSVSVHKQVRNLLVRI-----GAVPQLVDVLPCLDVECLE 329
Query: 198 GSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDAILSILITLSVYRSVKA 257
++ +LDS+ L++E + + ++ N + L ++ N AI SIL ++ S +
Sbjct: 330 SALFVLDSLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAI-SILWSVCKLASEEC 388
Query: 258 Q--LVELGMVQILTRILSDSRTQILTVEKSIKMLSI 291
VE+G+ L ++ L ++S ++L +
Sbjct: 389 SSLAVEVGLAAKLLLVIQSGCDPALK-QRSAELLKL 423
Score = 59 (25.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 32/179 (17%), Positives = 75/179 (41%)
Query: 185 LEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDAILS 244
L LR+ +K+ ++ L + + + ++ + E + + L A+ ++
Sbjct: 149 LGTLRKAKGKAKVHALSELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIA 208
Query: 245 ILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGRLALSE 304
IL+ L + KA L++ V ++ +L+D ++E I ++ E + +E
Sbjct: 209 ILVNLELDSDSKAGLMQPARVSLMVDMLNDG-----SIETKINCARLIGRLVEEKGFRAE 263
Query: 305 EASCAGRVVERVMKVGKTAREDAV---VVIWSMCCVYKDARVKEAVVNSNGLTKLLLVM 360
S +V + V R + V + + V+K +V+ +V + +L+ V+
Sbjct: 264 LVSSHSLLVGLMRLVKDRRRRNGVSPALTLLKSVSVHK--QVRNLLVRIGAVPQLVDVL 320
Score = 41 (19.5 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 18/94 (19%), Positives = 43/94 (45%)
Query: 213 KRRVLETENLLSALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRIL 272
K+R + + + L+ A+ +A A+ + + + K +V+ G V +++ +L
Sbjct: 135 KKRSEDVQGRAIEILGTLRKAKGKAKVHALSELKQVVMAHAIAKKTVVDEGGVFVISSLL 194
Query: 273 SDSRTQILTVEKSIKMLSIVATCSEGRLALSEEA 306
S + + E +I +L + S+ + L + A
Sbjct: 195 SPFTSHAVGSE-AIAILVNLELDSDSKAGLMQPA 227
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 198 (74.8 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
Identities = 37/70 (52%), Positives = 45/70 (64%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P++F CPISL+ M+ PV+LCTG TY+R +I W GH TCP TMQ L PN TL
Sbjct: 64 IPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTL 123
Query: 70 HRLIAHWSHQ 79
H LI W Q
Sbjct: 124 HHLIYTWFSQ 133
Score = 165 (63.1 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
Identities = 50/200 (25%), Positives = 107/200 (53%)
Query: 183 LFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDAI 242
L +++L +G+ ++KI +++ + + + ++ + +LL L ++L +D+ + +
Sbjct: 235 LIVDMLNDGSNETKINCARLIRGLVEEKGFRAELVSSHSLLVGL---MRLVKDKRHRNGV 291
Query: 243 ---LSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGR 299
L +L +SV++ V++ +V +G V L IL + L E ++ +L + T EGR
Sbjct: 292 SPALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECL--ELALFVLDALCTDVEGR 349
Query: 300 LALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVVNSNGLT-KLLL 358
+A+ + A+ V +M+V + A+ ++WS+C + + AV GL KLLL
Sbjct: 350 VAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLAPEECSPLAV--EVGLAAKLLL 407
Query: 359 VMQSENEGIVRKMCGDLVKV 378
V+QS + +++ +L+K+
Sbjct: 408 VIQSGCDAALKQRSAELLKL 427
Score = 61 (26.5 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 17/94 (18%), Positives = 45/94 (47%)
Query: 185 LEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDAILS 244
L L++ +++ ++ L I + + R+ + E +S + L A+ +++
Sbjct: 153 LGTLKKAKGQARVHALSELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVA 212
Query: 245 ILITLSVYRSVKAQLVELGMVQILTRILSDSRTQ 278
IL++L + K+ L++ V ++ +L+D +
Sbjct: 213 ILVSLDLDSDSKSGLMQPAKVSLIVDMLNDGSNE 246
Score = 49 (22.3 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 36/187 (19%), Positives = 79/187 (42%)
Query: 109 VKVAKFATGCEANRRFLASYGGFVEAVFGVLN--RKRRSEIAVLESAVRVLNLIVNENGV 166
+ A+ G + F A + G++ + +R V A+R+L I V
Sbjct: 249 INCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVKDKRHRNGV-SPALRLLKPI----SV 303
Query: 167 KEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSAL 226
+++ L+++ +P ++IL + + ++ +LD++ D E + V ++ N +
Sbjct: 304 HKQVRSLMVSI-GAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVAVKDSANTIPYT 362
Query: 227 FDYLKLAEDQALNDAILSILITLSVYRSVKAQ--LVELGMVQILTRILSDSRTQILTVEK 284
L + N A LSIL ++ + VE+G+ L ++ L ++
Sbjct: 363 VRVLMRVSENCTNYA-LSILWSVCKLAPEECSPLAVEVGLAAKLLLVIQSGCDAALK-QR 420
Query: 285 SIKMLSI 291
S ++L +
Sbjct: 421 SAELLKL 427
Score = 41 (19.5 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 13/60 (21%), Positives = 28/60 (46%)
Query: 213 KRRVLETENLLSALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRIL 272
K+R + + + LK A+ QA A+ + + + + +VE G V +++ +L
Sbjct: 139 KKRSEDVQGRAIEILGTLKKAKGQARVHALSELKQIVIAHLMARKTVVEEGGVSVISSLL 198
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 299 (110.3 bits), Expect = 9.4e-26, P = 9.4e-26
Identities = 101/391 (25%), Positives = 184/391 (47%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
+ +P F CP+SL++MK PV + TG TY+R+ IQ W++ G+ TCP T Q L PN
Sbjct: 239 LTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNY 298
Query: 68 TLHRLIAHW--SHQLTVP----------EQEVRVWXXXXXXXXXXXXXCVDYLVKVAKFA 115
L LI+ W H + P ++ V V +
Sbjct: 299 VLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSL 358
Query: 116 TGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVR-VLNLIVNENGVKEKLNRLI 174
+ + R L + G + + +L + ++A E+A+ VLNL + EN KE LI
Sbjct: 359 SKRSTDNRILIAEAGAIPVLVNLLTSE---DVATQENAITCVLNLSIYENN-KE----LI 410
Query: 175 LNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAE 234
+ + +++LR G ++++ + L S+SL +E+K ++ + AL D L+
Sbjct: 411 MFA-GAVTSIVQVLRAGTMEARENAAATLFSLSLADENKI-IIGGSGAIPALVDLLENGT 468
Query: 235 DQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVAT 294
+ DA + L L +Y K + V G+V L ++LSDS T+ V++++ +LS++A
Sbjct: 469 PRGKKDAATA-LFNLCIYHGNKGRAVRAGIVTALVKMLSDS-TRHRMVDEALTILSVLAN 526
Query: 295 CSEGRLALSEEASCAGRVVERVMKVGKTA-REDAVVVIWSMCCVYKDARVKEAVVNSNGL 353
+ + A+ + + + +++ +T RE+A ++ S+C R E ++ L
Sbjct: 527 NQDAKSAIVKANTLPALI--GILQTDQTRNRENAAAILLSLC-----KRDTEKLITIGRL 579
Query: 354 TKLLLVMQSENEGIVR--KMCGDLVKVLGKA 382
++ +M G R + L+++L KA
Sbjct: 580 GAVVPLMDLSKNGTERGKRKAISLLELLRKA 610
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 95/390 (24%), Positives = 186/390 (47%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGH-DTCPATMQILSTKEFVPN 66
I +P F CPISL++MK PV + TG+TYDR SI+ WL +G ++CP T Q ++ + PN
Sbjct: 10 IEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPN 69
Query: 67 LTLHRLIAHWS--------HQLTVP-----EQEVRVWXXXXXXXXXXXXXCVDYLVK-VA 112
TL RLI W ++ P + E+ C+ L + V+
Sbjct: 70 HTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQIVS 129
Query: 113 KFATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVL-NLIVNENGVKEKLN 171
+ AT N+R L + G E + +++ + ++ + A+ +L +L +E +K LN
Sbjct: 130 ENAT----NKRCLEA-AGVPEFLANIVSNDSENG-SLTDEALNLLYHLETSETVLKNLLN 183
Query: 172 RLILNTYNCLPLFLEILREGNLDSKIGSIKILDSI-SLDNESKRRVLETENLLSALFDYL 230
N N + +I++ G +S++ + +L +I + + + L+ E + + + L
Sbjct: 184 NKKDN--NIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPE-VFTEVVQIL 240
Query: 231 KLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSR--TQILTVEKSIKM 288
Q A + IL+ + + + + VE G++ ++ +L D ++ E ++ +
Sbjct: 241 DDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVV 300
Query: 289 LSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVV 348
L ++ C+EGR + V +++++V +TA + AV V+ S+ + ++
Sbjct: 301 LDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEML 360
Query: 349 NSNGLTKLLLVMQSENEGIVRKMCGDLVKV 378
+ KL LV+Q G ++ +L+K+
Sbjct: 361 QLGVVAKLCLVLQVSCGGKTKEKAKELLKL 390
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 291 (107.5 bits), Expect = 7.0e-25, P = 7.0e-25
Identities = 94/342 (27%), Positives = 165/342 (48%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P+ FRCPISL++M+ PV + +G TY+RS IQ WL+SGH TCP T Q LS PN L
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVL 287
Query: 70 HRLIAHW--SHQLTVPEQEVRVWXXXXXXXXXXXXXCVDYLVKVAKFATGCEANR----- 122
LI+ W ++ + +P+ + + L+ + E
Sbjct: 288 KSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEI 347
Query: 123 RFLASYGG-----FVEA--VFGVLNRKRRSEIAVLESAVR-VLNLIVNENGVKEKLNRLI 174
R LA EA + ++N S+ E AV +LNL ++EN N+
Sbjct: 348 RLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHEN------NKAS 401
Query: 175 LNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAE 234
+ + +P +E+L+ G+++++ + L S+S+ +E+K + + L + L
Sbjct: 402 IVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTI-GAAGAIPPLINLLCDGS 460
Query: 235 DQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVAT 294
+ DA +I L +Y+ K + V+ G+V L L D + +++++ +LSI+A
Sbjct: 461 PRGKKDAATAIF-NLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGM--IDEALSLLSILAG 517
Query: 295 CSEGRLALSEEASCAGRVVERVMKVGKTA-REDAVVVIWSMC 335
EG++ ++ +VE V+K G RE+A ++W +C
Sbjct: 518 NPEGKIVIARSEPIPP-LVE-VIKTGSPRNRENAAAILWLLC 557
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 288 (106.4 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 92/338 (27%), Positives = 162/338 (47%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
+ +P+ F CPI+L++M PV + TG TY++ SIQ W ++GH TCP T Q L PN
Sbjct: 288 LILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNF 347
Query: 68 TLHRLIAHW--SHQLTVPEQEVRVWXXXXXXXXXXXXXCVDYL-----------VKVAKF 114
L LI W + +PE+EV V+ L VK +
Sbjct: 348 ALKNLIMQWCEKNNFKIPEKEVSP--DSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRL 405
Query: 115 ATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVR-VLNLIVNENGVKEKLNRL 173
R L + G + + +L+ + + E+AV +LNL ++E +N+
Sbjct: 406 LARENPENRVLIANAGAIPLLVQLLSYP---DSGIQENAVTTLLNLSIDE------VNKK 456
Query: 174 ILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLA 233
+++ +P +EIL GN +++ S L S+S+ +E+K + N + L D L+
Sbjct: 457 LISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTI-GLSNGIPPLVDLLQHG 515
Query: 234 EDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVA 293
+ DA L+ L LS+ + K + ++ G+VQ L +L D + +++++ +L ++A
Sbjct: 516 TLRGKKDA-LTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGM--IDEALSILLLLA 572
Query: 294 TCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVI 331
+ EGR A+ + S +VE + + +E A V+
Sbjct: 573 SHPEGRQAIGQ-LSFIETLVEFIRQGTPKNKECATSVL 609
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 280 (103.6 bits), Expect = 7.4e-23, P = 7.4e-23
Identities = 89/342 (26%), Positives = 164/342 (47%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
I +P+ FRCPISL++MK PV + TG TY+R+ I+ W+ SGH TCP T Q +ST PN
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNY 330
Query: 68 TLHRLIAHW--SHQLTVPEQEVRVWXXXXXXXXXXXXXCVDYLVKVAKFAT----GCEAN 121
L LI+ W ++ + P++ + L K+ T A
Sbjct: 331 VLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAE 390
Query: 122 RRFLASYGG-----FVEA--VFGVLNRKRRSEIAVLESAVR-VLNLIVNENGVKEKLNRL 173
R LA EA + +L+ S++ E AV +LNL ++E+ N+
Sbjct: 391 LRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHED------NKA 444
Query: 174 ILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLA 233
+ + +P + +L+ G+++++ + L S+S+ +E K + + AL L
Sbjct: 445 SIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTI-GGMGAIPALVVLLGEG 503
Query: 234 EDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVA 293
+ DA + L L +Y+ K + + G+V ++ ++++ ++ ++++ +LSI++
Sbjct: 504 SQRGKKDAAAA-LFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALM--DEAMAILSILS 560
Query: 294 TCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMC 335
+ EG+ A+ A +VE + RE+A V+ +C
Sbjct: 561 SHPEGKAAIGA-AEPVPVLVEMIGSGTPRNRENAAAVMLHLC 601
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 277 (102.6 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 95/394 (24%), Positives = 185/394 (46%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
+ +P F CPISL++MK P + TG TY+RS IQ W++ G+ +CP T Q L PN
Sbjct: 241 LTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNY 300
Query: 68 TLHRLIAHWSHQLTVPEQEVRVWXXXXXXXXXXXXXCVDYLVKVAKFATGCEANRRFLAS 127
L LI+ W + + EQ + + A C+ + + +
Sbjct: 301 VLRSLISQWCTKHNI-EQPGGYMNGRTKNSDGSFRDLSGDMSAIR--ALVCKLSSQSIED 357
Query: 128 YGGFVEAVFGVLNRKRRSEIAVLES-AVRVLNLIVNENG---VKEKLNRLILNT----YN 179
V + + R + I + E+ A+ VL ++ +G +E ILN +N
Sbjct: 358 RRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHN 417
Query: 180 CLPLFLE--------ILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLK 231
+ L +LR G+++++ + L S+SL +E+K ++ + AL D L+
Sbjct: 418 KELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKI-IIGASGAIMALVDLLQ 476
Query: 232 LAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSI 291
+ DA + L L +Y+ K + V G+V+ L ++L+DS ++ + ++++ +LS+
Sbjct: 477 YGSVRGKKDAATA-LFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMA-DEALTILSV 534
Query: 292 VATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVVNSN 351
+A+ + A+ A+ +++ + K RE+A ++ +C R E +++
Sbjct: 535 LASNQVAKTAILR-ANAIPPLIDCLQKDQPRNRENAAAILLCLC-----KRDTEKLISIG 588
Query: 352 GLTKLLLVMQSENEGIVR--KMCGDLVKVLGKAS 383
L ++ +M+ +G R + L+++L K+S
Sbjct: 589 RLGAVVPLMELSRDGTERAKRKANSLLELLRKSS 622
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 206 (77.6 bits), Expect = 7.2e-22, Sum P(2) = 7.2e-22
Identities = 37/70 (52%), Positives = 49/70 (70%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGH-DTCPATMQILSTKEFVPN 66
I +P+ F CPISLD+MK PV + TG+TYDR SI+ WL SG ++CP T Q+++ + PN
Sbjct: 5 IEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPN 64
Query: 67 LTLHRLIAHW 76
TL RLI W
Sbjct: 65 HTLRRLIQSW 74
Score = 114 (45.2 bits), Expect = 7.2e-22, Sum P(2) = 7.2e-22
Identities = 50/247 (20%), Positives = 114/247 (46%)
Query: 138 VLNRKRRSEIAVLESAVRVL-NLIVNENGVKEKLNRLILNTYNCLPLFLEILREGNLDSK 196
+L + S ++++ A+ VL +L +E +K LN T N + +I++ G +S+
Sbjct: 173 MLENRFDSSRSLMDEALSVLYHLDTSETALKSLLNNK-KGT-NLVKTLTKIMQRGIYESR 230
Query: 197 IGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDAILS---ILITLSVYR 253
+ +L + L+ +++ E L + +++ DQ + A S IL+ +
Sbjct: 231 AYAALLLKKL-LEVADPMQIILLERELFG--EVIQILHDQISHKATRSAMQILVITCPWG 287
Query: 254 SVKAQLVELGMVQILTRILSDSR--TQILTVEKSIKMLSIVATCSEGRLALSEEASCAGR 311
+ + VE G + ++ +L D ++ E ++ +L ++ C+EGR +
Sbjct: 288 RNRHKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAV 347
Query: 312 VVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVVNSNGLTKLLLVMQSENEGIVRKM 371
V +++++V + E AV V+ S+ + + ++ + KL LV+Q ++
Sbjct: 348 VSKKILRVSQITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEK 407
Query: 372 CGDLVKV 378
+L+K+
Sbjct: 408 AKELLKL 414
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 274 (101.5 bits), Expect = 7.6e-22, P = 7.6e-22
Identities = 85/340 (25%), Positives = 161/340 (47%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P+ FRCPISL++M+ PV + +G TY+R+ I+ W+E GH TCP T Q L++ PN L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 70 HRLIAHWSHQLTV----PEQEVRVWXXXXXXXXXXXXXCVDYLVKVAKFATGCEANRRFL 125
LIA W + P +R D + ++A G ++R
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAY---GNPEDQRSA 372
Query: 126 ASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLI---VNENGVKEKLNRLILN------ 176
A + A NR +E + V +L+ + E+ V LN I
Sbjct: 373 AGEIRLL-AKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAI 431
Query: 177 -TYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAED 235
+ +P +++L++G+++++ + L S+S+ +E+K + + L L
Sbjct: 432 VSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTI-GALGAIPPLVVLLNEGTQ 490
Query: 236 QALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATC 295
+ DA + L L +Y+ K + + G++ LTR+L++ + + V++++ +L+I+++
Sbjct: 491 RGKKDAATA-LFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGM--VDEALAILAILSSH 547
Query: 296 SEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMC 335
EG+ A+ + +VE + RE+A V+ +C
Sbjct: 548 PEGK-AIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLC 586
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 260 (96.6 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 92/395 (23%), Positives = 176/395 (44%)
Query: 5 ELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDT-CPATMQILSTKEF 63
+L I +P FRCPISL++M+ PV++CTG TYDR+SI+ W+ G++T CP T LS
Sbjct: 9 DLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTL 68
Query: 64 VPNLTLHRLIAHWS--------HQLTVPEQ-----EVRVWXXXXXXXXXXXXXCVDYLVK 110
+PN TL RLI W ++ P+Q VR
Sbjct: 69 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAA 128
Query: 111 VAKF-ATGCEANR-RFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKE 168
+ + ++++ R L + E + +L + S V ES ++ L + E
Sbjct: 129 LRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFV 188
Query: 169 KLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNES---KRRVLETENLLSA 225
++ + + +L + ++++++ + +++ +S +S K + +E++
Sbjct: 189 SIS----SDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEG 244
Query: 226 LFDYLKLAEDQALNDAI-LSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEK 284
+ D L+ I + L L +S + + G +IL L+ + T E+
Sbjct: 245 VLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDT-ER 303
Query: 285 SIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVK 344
++ + ++ EG A E A +V+ +++V A E A + ++C + R +
Sbjct: 304 ALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTA--EERWR 361
Query: 345 EAVVNSNGLTKLLLVMQSENEGIVRKMCGDLVKVL 379
E + + +LLL++QSE +K L+K+L
Sbjct: 362 EEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLL 396
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 187 (70.9 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 31/69 (44%), Positives = 49/69 (71%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
I++P FRCP+S ++M PV + +G T+DR+SI+ WL++G CP T Q+L+ +E +PN
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNY 295
Query: 68 TLHRLIAHW 76
T+ +IA W
Sbjct: 296 TVKAMIASW 304
Score = 132 (51.5 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 56/230 (24%), Positives = 106/230 (46%)
Query: 134 AVFGVLNRKRRSEIAVLESAVR-VLNLIVNENGVKEKLNRLILNTYNCLPLFLEILREGN 192
A+ +L+ E E AV +LNL ++E LN+ ++ + + +L GN
Sbjct: 515 AITPLLSLLYSEEKLTQEHAVTALLNLSISE------LNKAMIVEVGAIEPLVHVLNTGN 568
Query: 193 LDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDAILSILITLSVY 252
+K S L S+S+ ++ R+ ++ + AL + L + DA S L LS+
Sbjct: 569 DRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAA-SALFNLSIT 627
Query: 253 RSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGRLALSEEASCAGRV 312
KA++V+ V+ L +L D ++ V+K++ +L+ ++ EGR A+ E +
Sbjct: 628 HDNKARIVQAKAVKYLVELL-DPDLEM--VDKAVALLANLSAVGEGRQAIVREGGIP-LL 683
Query: 313 VERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVVNSNGLTKLLLVMQS 362
VE V + +E+A V+ +C + V+ + L+ + QS
Sbjct: 684 VETVDLGSQRGKENAASVLLQLCL--NSPKFCTLVLQEGAIPPLVALSQS 731
Score = 38 (18.4 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 200 IKILDSISLDNESKRRVLETENLLS 224
+KI S SL ES+ + LE LLS
Sbjct: 367 LKINVSASLCGESQSKDLEIFELLS 391
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 258 (95.9 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 97/398 (24%), Positives = 181/398 (45%)
Query: 5 ELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFV 64
E I +P F+CPIS+D+MK PV + TG+TYDR SI+ W+ SG+ TCP T +L+T + +
Sbjct: 26 ESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQI 85
Query: 65 PNLTLHRLIAHWSHQL-----------TVPEQEVRVWXXXXXXXXXXXXX----CVDYLV 109
PN T+ ++I W + VP V+ C +
Sbjct: 86 PNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIE 145
Query: 110 KVAKFATGCEANRRFLA--SYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVK 167
K+ K E NR+ + S G + F + + +L + +L + G+
Sbjct: 146 KIKKLGDESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTF-MLNEILSLLTWMF-PIGL- 202
Query: 168 EKLNRLILNT-YNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETEN-LLSA 225
E +++L T + C+ L+ + + +K + +SLD E++ EN + A
Sbjct: 203 EGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMK--EILSLD-ETRVHSFAVENGVAEA 259
Query: 226 LFDYLKLAEDQALNDAILSILITL--SVYRS--VKAQLVELGMVQILTRILSDSRTQILT 281
L +KL D + + S LI + V + + ++ +E+G+V I ++ D+ +
Sbjct: 260 L---VKLIRDSVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVC- 315
Query: 282 VEKSIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDA 341
EK++ +L + GR + + A +V+++ KV + A ++ +I +
Sbjct: 316 -EKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGNTV 374
Query: 342 RVKEAVVNSNGLTKLLLVMQSENEGIVRKMCGDLVKVL 379
V++AV K+LLV+Q ++ +L+K++
Sbjct: 375 AVEDAV-RLGAFQKVLLVLQVGYGEETKEKATELLKMM 411
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 202 (76.2 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 38/72 (52%), Positives = 47/72 (65%)
Query: 5 ELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFV 64
+L I +P FRCPISLD+M PV++ TG TYDR+SI W+ G+ TCP T LS +
Sbjct: 9 DLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLI 68
Query: 65 PNLTLHRLIAHW 76
PN TL RLI W
Sbjct: 69 PNHTLRRLIQEW 80
Score = 99 (39.9 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 51/273 (18%), Positives = 118/273 (43%)
Query: 115 ATGCEANRRFLASYGG---FVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLN 171
A E NR +A + V +F + S V ES ++ L + E +
Sbjct: 135 ARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHMTETECEA--- 191
Query: 172 RLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNES---KRRVLETENLLSALFD 228
+ + + + +L + +++ ++ + +++ + +S K + ++++ + D
Sbjct: 192 --VASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVLD 249
Query: 229 YLK--LAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSI 286
LK ++ +AL I +I L + + + + G IL L+ + T E+ +
Sbjct: 250 LLKNPISSRRALKIGIKAIF-ALCLVKQTRHLAISAGAPGILIDRLAADFDRCDT-ERGL 307
Query: 287 KMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEA 346
+ ++ EG A E A +V+ +++V A E A + ++C + R ++
Sbjct: 308 ATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTA--EERCRDE 365
Query: 347 VVNSNGLTKLLLVMQSENEGIVRKMCGDLVKVL 379
+ +T+LLL++QS+ ++ L+K+L
Sbjct: 366 AAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLL 398
Score = 39 (18.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 15/67 (22%), Positives = 33/67 (49%)
Query: 290 SIVATCS-EGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVV 348
+++A C+ E R +EA+ AG V + ++ V E A + + +D+ ++ V
Sbjct: 351 ALLALCTAEERCR--DEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTV 408
Query: 349 NSNGLTK 355
+S+ +
Sbjct: 409 HSDDFNR 415
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 257 (95.5 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 92/337 (27%), Positives = 151/337 (44%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P FRCPI+L++M+ PV + TG TYDR SI W++SGH+TCP T Q+L VPN L
Sbjct: 274 IPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRAL 333
Query: 70 HRLIAHWSHQLTVPEQEVRVWXXXXX---XXXXXXXXCVDYLVKVAKFA--TGCEANRRF 124
LI W +P + V +L++ A G R
Sbjct: 334 KNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNGVVFELRA 393
Query: 125 LASYGGFVEAVF---GVLNRKRRSEIAVLESA-VRVLNLIVNENGVKEKLNRLILNTYNC 180
LA A G + + R S + + I+N + +++ R I+ T
Sbjct: 394 LAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSILEQNKTR-IMETDGA 452
Query: 181 LPLFLEILREG-NLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALN 239
L +E+LR G ++K + L S++ + +RR+ ++S L D K +
Sbjct: 453 LNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKR 512
Query: 240 DAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGR 299
DA+++IL L R + VE G++ D+ ++ E+++ ++ V G
Sbjct: 513 DALVAIL-NLVAERENVGRFVEAGVMGAA----GDAFQEL--PEEAVAVVEAVVRRG-GL 564
Query: 300 LALSEEASCAGRVVERVMKVGK-TAREDAVVVIWSMC 335
+A+S S R++ VM+ G T RE A + +MC
Sbjct: 565 MAVSAAFSLI-RLLGEVMREGADTTRESAAATLVTMC 600
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 244 (91.0 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 94/383 (24%), Positives = 180/383 (46%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILS-TKEFVPNLT 68
+PN FRCPISL++M PV L +G T+DR SIQ W++SG+ TCP T LS T +PN
Sbjct: 5 LPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHA 64
Query: 69 LHRLIAHWSH----QLTVP--EQE-----VRVWXXXXXXXXXXXXXCVDYLVKVAKFATG 117
L LI +++H + + P +QE + ++ L ++ +
Sbjct: 65 LRSLILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLTKR 124
Query: 118 CEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLNRLILNT 177
+ RR + G V A ++ + VL+ + L+L++N + E N++ L
Sbjct: 125 DSSIRRKVTESGA-VRAALDCVDSCNQ----VLQE--KSLSLLLNLS--LEDDNKVGLVA 175
Query: 178 YNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQA 237
+ + +LR G+ D K + +L S+++ +K + + +SAL L++ D+
Sbjct: 176 DGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRE 235
Query: 238 LNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSE 297
++ + L L + + ++V+ G V IL +DS +E+++++L ++ C
Sbjct: 236 RKESATA-LYALCSFPDNRKRVVDCGSVPILVEA-ADSG-----LERAVEVLGLLVKCRG 288
Query: 298 GRLALSEEASCAGRVVERVMKVGKTAR-EDAVVVIWSMCCVYKDARVKEAVVNSNGLTKL 356
GR +S+ + V+ V++ G + ++ ++ +CC + V E V G+ ++
Sbjct: 289 GREEMSKVSGFV-EVLVNVLRNGNLKGIQYSLFILNCLCCCSGEI-VDE--VKREGVVEI 344
Query: 357 LLVMQSENEGIVRKMCGDLVKVL 379
+ +R+ LV L
Sbjct: 345 CFGFEDNESEKIRRNATILVHTL 367
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 157 (60.3 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
+A+ F CP+SL+VM PV + +G TY+++ I+ W++ G CP T Q L+ +PN
Sbjct: 231 VAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNY 290
Query: 68 TLHRLIAHW--SHQLTVPE 84
T+ LIA+W ++ + +P+
Sbjct: 291 TVKALIANWCETNDVKLPD 309
Score = 144 (55.7 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 57/220 (25%), Positives = 108/220 (49%)
Query: 145 SEIAVLESAVR-VLNLIVNENGVKEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKIL 203
++ A E+AV +LNL +N+N K I + PL + +L G+ ++K S L
Sbjct: 598 TDSATQENAVTALLNLSINDNNKKA-----IADAGAIEPL-IHVLENGSSEAKENSAATL 651
Query: 204 DSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELG 263
S+S+ E+K ++ ++ + L D L + DA + L LS+++ KA +V+ G
Sbjct: 652 FSLSVIEENKIKIGQS-GAIGPLVDLLGNGTPRGKKDAATA-LFNLSIHQENKAMIVQSG 709
Query: 264 MVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKT- 322
V+ L ++ + V+K++ +L+ +AT EGR A+ +E +VE V+++G
Sbjct: 710 AVRYLIDLMDPAAGM---VDKAVAVLANLATIPEGRNAIGQEGGIP-LLVE-VVELGSAR 764
Query: 323 AREDAVVVIWSMCCVYKDARVKEAVVNSNGLTKLLLVMQS 362
+E+A + + R V+ + L+ + QS
Sbjct: 765 GKENAAAALLQLST--NSGRFCNMVLQEGAVPPLVALSQS 802
Score = 94 (38.1 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 33/186 (17%), Positives = 87/186 (46%)
Query: 185 LEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDAILS 244
+E L+ +LD++ + L ++ N R V+ + L + L + D A + ++
Sbjct: 550 VEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELL-YSTDSATQENAVT 608
Query: 245 ILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGRLALSE 304
L+ LS+ + K + + G ++ L +L + ++ E S L ++ E ++ + +
Sbjct: 609 ALLNLSINDNNKKAIADAGAIEPLIHVLENGSSE--AKENSAATLFSLSVIEENKIKIGQ 666
Query: 305 EASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVVNSNGLTKLLLVMQSEN 364
+ G +V+ + ++DA ++++ ++++ +A++ +G + L+ +
Sbjct: 667 SGAI-GPLVDLLGNGTPRGKKDAATALFNLS-IHQE---NKAMIVQSGAVRYLIDLMDPA 721
Query: 365 EGIVRK 370
G+V K
Sbjct: 722 AGMVDK 727
Score = 68 (29.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 19/104 (18%), Positives = 52/104 (50%)
Query: 171 NRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYL 230
NR+++ + L +E+L + ++ ++ L ++S+++ +K+ + + + L L
Sbjct: 578 NRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADA-GAIEPLIHVL 636
Query: 231 KLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSD 274
+ +A ++ + L +LSV K ++ + G + L +L +
Sbjct: 637 ENGSSEAKENSAAT-LFSLSVIEENKIKIGQSGAIGPLVDLLGN 679
Score = 60 (26.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 30/152 (19%), Positives = 72/152 (47%)
Query: 196 KIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDAILSILITLSVYRSV 255
++GS +I+ + S NE++R + E E + L + LK + A + +
Sbjct: 522 RLGS-RIVSAPS--NETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDN 578
Query: 256 KAQLVELGMVQILTRIL--SDSRTQILTVEKSIKMLSIVATCSEGRLALSEEASCAGRVV 313
+ + G + +L +L +DS TQ E ++ L ++ + A+++ + +
Sbjct: 579 RIVIGNSGAIVLLVELLYSTDSATQ----ENAVTALLNLSINDNNKKAIADAGAIEPLI- 633
Query: 314 ERVMKVGKT-AREDAVVVIWSMCCVYKDARVK 344
V++ G + A+E++ ++S+ V ++ ++K
Sbjct: 634 -HVLENGSSEAKENSAATLFSLS-VIEENKIK 663
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 168 EKLNRLILNTYNCLPLFLEILREGNLDSKI-----GSIKILDSISLDNESKRRVLETENL 222
E+L L+T L +L + N+D++I G+I +L + +S + EN
Sbjct: 551 EELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQ----ENA 606
Query: 223 LSALFDYLKLAED--QALNDA 241
++AL + L + ++ +A+ DA
Sbjct: 607 VTALLN-LSINDNNKKAIADA 626
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 243 (90.6 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 91/373 (24%), Positives = 169/373 (45%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
++ P FRCP+S ++M+ PV L +G TYD+ IQ WL SG+ TCP T Q+L PNL
Sbjct: 72 VSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNL 131
Query: 68 TLHRLIAHWS-----------HQLTVPEQEV------RVWXXXXXXXXXXXXXCVDYLVK 110
+ +I+ W H V E E ++ K
Sbjct: 132 LIREMISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQDQKSAAK 191
Query: 111 VAKFAT--GCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKE 168
+ T G E F S V +L+ E + +LN+ ++++ K
Sbjct: 192 ELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDSNK- 250
Query: 169 KLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSIS-LDNESKRRVLETENLLSALF 227
+L+ N +PL ++ LR G + ++ + + ++S LD S + ++ +L L
Sbjct: 251 ---KLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALD--SNKVLIGKSGILKPLI 305
Query: 228 DYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIK 287
D L+ A+ D + + + TL + +++ V G V++L + +S+ L V++ +
Sbjct: 306 DLLEEGNPLAIKD-VAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNG----LYVDELLA 360
Query: 288 MLSIVATCSEGRLALSEEASCAGRV-VERVMKVGKTAREDAVVVIWSMCCV--YKDARVK 344
+L+++ T + L E + + + R + K +E+A+V++ ++C K +K
Sbjct: 361 ILAMLVTHWKAVEELGELGGVSWLLKITRESEC-KRNKENAIVILHTICFSDRTKWKEIK 419
Query: 345 EAVVNSNG-LTKL 356
E N++G +TKL
Sbjct: 420 EEE-NAHGTITKL 431
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 150 (57.9 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 54/206 (26%), Positives = 101/206 (49%)
Query: 133 EAVFGVLNRKRRSEIAVLESAVR-VLNLIVNENGVKEKLNRLILNTYNCLPLFLEILREG 191
EA+ +++ ++ + AV +LNL +N+N LI + +PL + +L+ G
Sbjct: 463 EAIPSLVSLLYSTDERIQADAVTCLLNLSINDNN-----KSLIAESGAIVPL-IHVLKTG 516
Query: 192 NLD-SKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDAILSILITLS 250
L+ +K S L S+S+ E K + E + L D L DA + L LS
Sbjct: 517 YLEEAKANSAATLFSLSVIEEYKTEIGEA-GAIEPLVDLLGSGSLSGKKDAATA-LFNLS 574
Query: 251 VYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGRLALSEEASCAG 310
++ K +++E G V+ L ++ + VEK++ +L+ +AT EG++A+ EE
Sbjct: 575 IHHENKTKVIEAGAVRYLVELMDPAFGM---VEKAVVVLANLATVREGKIAIGEEGGIP- 630
Query: 311 RVVERVMKVGKT-AREDAVVVIWSMC 335
V+ V+++G +E+A + +C
Sbjct: 631 -VLVEVVELGSARGKENATAALLQLC 655
Score = 149 (57.5 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
+ VP+ FRC +SL++M PV + +G T++R IQ W++ G CP T Q LS PN
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNF 297
Query: 68 TLHRLIAHW 76
+ +A W
Sbjct: 298 IVRAFLASW 306
Score = 78 (32.5 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 43/194 (22%), Positives = 90/194 (46%)
Query: 171 NRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYL 230
NR+++ +P + +L + + ++ L ++S+++ +K + E+ ++ L L
Sbjct: 455 NRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVP-LIHVL 513
Query: 231 KLA--EDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRIL-SDSRTQILTVEKSIK 287
K E+ N A + L +LSV K ++ E G ++ L +L S S + ++
Sbjct: 514 KTGYLEEAKANSA--ATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALF 571
Query: 288 MLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAV 347
LSI E + + E A R + +M E AVVV+ ++ V ++ ++ A+
Sbjct: 572 NLSIH---HENKTKVIEAG--AVRYLVELMDPAFGMVEKAVVVLANLATV-REGKI--AI 623
Query: 348 VNSNGLTKLLLVMQ 361
G+ L+ V++
Sbjct: 624 GEEGGIPVLVEVVE 637
Score = 75 (31.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 37/189 (19%), Positives = 86/189 (45%)
Query: 185 LEILREGNLDSK---IGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDA 241
++ L+ +LD++ I+IL S DN R V+ + +L L +++ DA
Sbjct: 427 IDDLKSSSLDTQREATARIRILARNSTDN---RIVIARCEAIPSLVSLLYSTDERIQADA 483
Query: 242 ILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGRLA 301
+ + L+ LS+ + K+ + E G + L +L + + + S+ + E +
Sbjct: 484 V-TCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSL-SVIEEYKTE 541
Query: 302 LSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVVNSNGLTKLLLVMQ 361
+ E A +V+ + + ++DA ++++ ++ + + K V+ + G + L+ +
Sbjct: 542 IGE-AGAIEPLVDLLGSGSLSGKKDAATALFNLS-IHHENKTK--VIEA-GAVRYLVELM 596
Query: 362 SENEGIVRK 370
G+V K
Sbjct: 597 DPAFGMVEK 605
Score = 51 (23.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 33/141 (23%), Positives = 57/141 (40%)
Query: 254 SVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGRLALSEEASCAGRVV 313
S+ Q ++IL R +D+R I E ++S++ + E R+ ++ +C +
Sbjct: 434 SLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDE-RIQ-ADAVTCLLNLS 491
Query: 314 ERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVVNSNG-LTKLLLVMQSENEGIVRKMC 372
A A+V + V K ++EA NS L L ++ + + E
Sbjct: 492 INDNNKSLIAESGAIV---PLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAI 548
Query: 373 GDLVKVLGKASGLGNYQTKTA 393
LV +LG S G TA
Sbjct: 549 EPLVDLLGSGSLSGKKDAATA 569
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 242 (90.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 113/408 (27%), Positives = 172/408 (42%)
Query: 2 VRQEL---YIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQIL 58
V QE+ +I VP F CPISLD+M PV + TG TYDR+SI W+E GH TCP T Q+L
Sbjct: 294 VAQEIGDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQML 353
Query: 59 STKEFVPNLTLHRLIAHW------SHQ--LTVPEQEVRVWXXXXXXXXXXXXXCVDYLVK 110
VPN L LI W S++ T E V L+K
Sbjct: 354 MDSRIVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIK 413
Query: 111 VAKFATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVL---NLIVNENGVK 167
A G +A + A + A G NR +E + R+L N I EN V
Sbjct: 414 Y--LADGSQAAQTVAAREIRLL-AKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENSVT 470
Query: 168 EKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALF 227
LN I I+ EG+ I S+ ++ +++ E++ T LSA+
Sbjct: 471 AMLNLSIYEKNKS-----RIMEEGDCLESIVSV-LVSGLTV--EAQENAAATLFSLSAVH 522
Query: 228 DYLK-LA-EDQALND-AIL-------------SILITLSVYRSVKAQLVELGMVQILTRI 271
+Y K +A DQ + A+L + L LS + ++++E G V L
Sbjct: 523 EYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGA 582
Query: 272 LSDSRTQILTVEKSIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKT-AREDAVVV 330
L + E++ L+++ S G A+ +E S ++ +M+ G +E+AV
Sbjct: 583 LKNEGV----AEEAAGALALLVRQSLGAEAIGKEDSAVAGLMG-MMRCGTPRGKENAVAA 637
Query: 331 IWSMCCVYKDARVKEAVVNSNGLTKLLLVMQSENEGIVRKMCGDLVKV 378
+ +C A V E V+ + + LL + R+ L +V
Sbjct: 638 LLELCRS-GGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARV 684
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 193 (73.0 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 36/68 (52%), Positives = 43/68 (63%)
Query: 9 AVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLT 68
+VP F CPISLD+M+ PV TG TYDR SI W+E GH TCP + Q L+ VPN
Sbjct: 296 SVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRA 355
Query: 69 LHRLIAHW 76
L LI+ W
Sbjct: 356 LRSLISQW 363
Score = 81 (33.6 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 36/161 (22%), Positives = 72/161 (44%)
Query: 169 KLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFD 228
K NR + +PL +L + ++ ++ L ++S+ +K R++E E L +
Sbjct: 431 KQNRAFIADLGAIPLLCRLLLSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLRLIVG 490
Query: 229 YLKLAEDQALNDAILSILITLSVYRSVKAQLV-ELGMVQILTRILSDSRTQILTVEKSIK 287
L+ + + L +LSV + K ++ E G V+ L +L+ ++ + ++
Sbjct: 491 VLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPGAVEELASMLTKGTSR--GKKDAVM 548
Query: 288 MLSIVATCSEGRLALSEEASCAGRVVERVMKV-GKTAREDA 327
L ++T E + E SCA VV + + T E+A
Sbjct: 549 ALFNLSTHPESSARMLE--SCA--VVALIQSLRNDTVSEEA 585
Score = 66 (28.3 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 51/225 (22%), Positives = 98/225 (43%)
Query: 119 EANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLNRLILNTY 178
E N+ + G + + GVL +E A +A + +L V N +LI+N
Sbjct: 472 EPNKGRIMEQEGCLRLIVGVLQNGWTTE-AKENAAATLFSLSVVHN-----FKKLIMNEP 525
Query: 179 NCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLK---LAED 235
+ +L +G K ++ L ++S ES R+LE+ ++ AL L+ ++E+
Sbjct: 526 GAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAVV-ALIQSLRNDTVSEE 584
Query: 236 QALNDAILSILITLSVYRSV-KAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVAT 294
A A+ ++ S+ V ++ V +V ++ R + E ++ L +
Sbjct: 585 AA--GALALLMKQPSIVHLVGSSETVITSLVGLMRRGTPKGK------ENAVSALYEI-- 634
Query: 295 CSEGRLALSEE-ASCAG--RVVERVMKVG-KTAREDAVVVIWSMC 335
C G AL + A G V++ + G K A++ A +++ MC
Sbjct: 635 CRRGGSALVQRVAKIPGLNTVIQTITLNGTKRAKKKASLIV-KMC 678
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 168 (64.2 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 33/75 (44%), Positives = 42/75 (56%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P RCPISL +M PV + +G TY+R I+ W GH++CP T Q L PN +
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 71 RLIAHWSHQ--LTVP 83
LIA W Q +TVP
Sbjct: 336 GLIASWCEQNGITVP 350
Score = 88 (36.0 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 58/219 (26%), Positives = 95/219 (43%)
Query: 123 RFLASYGGFVEAVFGVLNRKRRSEIAVLES--AVRVLNLIVNENGVKEKLNRLILNTYNC 180
R L GFVEA L A + A+ + NL VN N KE L+L T
Sbjct: 459 RILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKE----LML-TSGV 513
Query: 181 LPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYL-KLAEDQALN 239
+PL LE + + + L+ L E + V+ + +S + L + + Q
Sbjct: 514 IPL-LEKMISCSQSQGPATALYLNLSCL--EKAKPVIGSSQAVSFFVNLLLQDTKTQCKL 570
Query: 240 DAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGR 299
DA L L LS Y L+ +++ L ++L+ + L +EKS+ +L +A+ EG+
Sbjct: 571 DA-LHALYNLSTYSPNIPTLLSSNIIKSL-QVLASTGNH-LWIEKSLAVLLNLASSREGK 627
Query: 300 LALSEEASCAGRV--VERVMKVGKTA-REDAVVVIWSMC 335
E + G + + V+ G T +E AV + +C
Sbjct: 628 ---EEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILC 663
Score = 62 (26.9 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 30/129 (23%), Positives = 60/129 (46%)
Query: 160 IVNENGVKEKLNRL--ILNTYNCLPLFLEIL----REGNLDSKIGSIKILDSISLDNESK 213
I +E KEK N + + N L + +IL +E +L K ++ + + DNE
Sbjct: 399 IESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAKKCKVVENVRILLKDNEEA 458
Query: 214 RRVLETENLLSALFDYLKLA---EDQALNDAILSILITLSVYRSVKAQLV-ELGMVQILT 269
R ++ + A +L+ A + A + L L+V + +L+ G++ +L
Sbjct: 459 RILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLE 518
Query: 270 RILSDSRTQ 278
+++S S++Q
Sbjct: 519 KMISCSQSQ 527
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 195 (73.7 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 81/379 (21%), Positives = 168/379 (44%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHD-TCPATMQILSTKEFVPN 66
+ VP F C +S +M P+ + +G T+++S I WL+ H+ TCP T Q+L + +PN
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLK--HERTCPRTKQVLYHRFMIPN 120
Query: 67 LTLHRLIAHWS--HQLTVP---EQEVRVWX----------XXXXXXXXXXXXCVDYLVKV 111
++ +I W H P ++ + ++ + +K
Sbjct: 121 HLINEVIKEWCLIHNFDRPKTSDEVIDLFTGDLESLLQRISSPSSVEDQTEAAKELALKA 180
Query: 112 AKFATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLN 171
+F++ C F+A + + L+ S LE+ V L++ EK
Sbjct: 181 KRFSSVCVY---FVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIF----STSEKNK 233
Query: 172 RLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLK 231
L+ LPL + +++G + ++I S ++S+S +S + ++ +L AL ++
Sbjct: 234 TLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSY-TDSNKIIIGNSEVLKALIHVIE 292
Query: 232 LAEDQALNDAILSILITLSVYRSVKAQLVELGMVQI-LTRILSDSRTQILTVEKSIKMLS 290
+ A ++A S L L + + + V G+++ + +I + S +L LS
Sbjct: 293 EGDSLATSEAF-SALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVSML--------LS 343
Query: 291 IVATCSEGRLALSEEASCAGRVVE--RVMKVGKTA--REDAVVVIWSMCCVYKDARVKEA 346
++A S +EE G + + +++ + E+AVV+++++C YK ++
Sbjct: 344 LLAFVSTQNHQTTEEMDNLGLIYDLFSILRNSNSLVNDENAVVIVYNICKSYK--ALQNV 401
Query: 347 VVNSNGLTKLLLVMQSENE 365
V+ K +V++ EN+
Sbjct: 402 VLREE---KRDVVLEEENK 417
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 192 (72.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 91/374 (24%), Positives = 165/374 (44%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHD-TCPATMQILSTKEFVPN 66
+ VP F C +S +M PV + +G TY++ I WL+ H+ TCP T Q+LS + ++PN
Sbjct: 70 VEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLK--HERTCPKTKQVLSHRLWIPN 127
Query: 67 LTLHRLIAHW------SHQLTVPEQEVRVWXXXXXXXXX--XXXXCVDYLVKVAKFATGC 118
+ LI W HQ E ++ V ++ AK
Sbjct: 128 HLISDLITQWCLVNKYDHQKPSDELVAELFTSDIEALLQRVSSSSSVADQIEAAKELR-- 185
Query: 119 EANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLNRLILNTY 178
++F FV + + R S ++ L+ AV +L + EN V N IL +
Sbjct: 186 HQTKKFPNVRVFFVAGIHDSITRLL-SPLSTLDEAVDS-SLELQENIVTALFNLSILESN 243
Query: 179 ------NCL--PLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYL 230
NCL PL + L++G +++ + L S+S +S + ++ + AL D +
Sbjct: 244 KTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAI-DSNKIIIGNSEAVKALIDLI 302
Query: 231 KLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLS 290
+ + A +A S + L + K ++V G++ T+ + V++ + +L+
Sbjct: 303 EEGDLLATKEAT-STVFNLCIVLENKGKVVSAGLIHAATKKIKAGSN----VDELLSLLA 357
Query: 291 IVATCSEGRLALSEEASCAGRVVERVMKVGKTAR----EDAVVVIWSMCCVYKD-ARVKE 345
+++T R EE G + + + K + E+AVV++++M +D +R+K
Sbjct: 358 LIST--HNRAV--EEMDKLGFIYDLFSILRKPSSLLTGENAVVIVFNMYDRNRDRSRLKV 413
Query: 346 A--VVNSNG-LTKL 356
N +G TKL
Sbjct: 414 VGEEENQHGTFTKL 427
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 170 (64.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 50/170 (29%), Positives = 73/170 (42%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P RCPISL +M PV + +G TY+R I+ W GH+TCP T Q L PN +
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 71 RLIAHWSHQ--LTVPE-----QEVRVWXXXXXXXXXXXXXCVD----YLVKVAKFATGCE 119
LIA W Q +P Q++ W V+ Y +K K E
Sbjct: 333 GLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYKLKGVKIVP-LE 391
Query: 120 ANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEK 169
N + E+ + + S+I VLE +L ++ E G+++K
Sbjct: 392 ENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKK 441
Score = 65 (27.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 43/230 (18%), Positives = 99/230 (43%)
Query: 161 VNENGVKEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETE 220
V+++ +E + +L Y L L E L+ K ++ + + D+E R +
Sbjct: 408 VSDDDDEEDSDINVLERYQDLLAVLN--EEEGLEKKCKVVEKIRLLLKDDEEARIFMGAN 465
Query: 221 NLLSALFDYLKLAEDQ---ALNDAILSILITLSVYRSVKAQLV-ELGMVQILTRILSDSR 276
+ AL +L A D A D+ L L+V + +L+ G++++L +++S +
Sbjct: 466 GFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAE 525
Query: 277 TQILTVEKSIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKT-AREDAVVVIWSMC 335
+ S L + +C + ++ + +V+ + K +T + DA+ ++++
Sbjct: 526 SH-----GSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLS 580
Query: 336 CVYKDARVKEAVVNSNGLTKLLLVMQSENEGI-VRKMCGDLVKVLGKASG 384
+ A+++SN + L ++ S E + + K L+ + G
Sbjct: 581 TYSPNI---PALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEG 627
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 143 (55.4 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 64/249 (25%), Positives = 126/249 (50%)
Query: 144 RSEIAVLESAVRVLNLIVNENGVKEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKIL 203
R + +A V+NL + EK N++ + +PL +++L+ G +++ L
Sbjct: 288 RYNLVQTNAAASVVNLSL------EKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGAL 341
Query: 204 DSISLDNESKRRVLETENLLSALFDYLKLAE-DQALNDAILSILITLSVYRSVKAQLVEL 262
S++L++E+K V+ + L L+ +E ++A DA L+ L LS+ S + +LV
Sbjct: 342 FSLALEDENKM-VIGVLGAVEPLLHALRSSESERARQDAALA-LYHLSLIPSNRTRLVRA 399
Query: 263 GMVQ-ILTRILS-DSRTQILTVEKSIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVG 320
G V +L+ + S DS ++IL V L +A C +G+ A+ + + +V ++ +VG
Sbjct: 400 GAVPTLLSMVRSGDSTSRILLV------LCNLAACPDGKGAMLD-GNAVAILVGKLREVG 452
Query: 321 ----KTAREDAVVVIWSMCCVYKDARVKEAVVNSNGLTKLLL-VMQSENEGIVRKMCGDL 375
+ ARE+ V V+ ++C + R + + + G ++L+ V ++ NE + K L
Sbjct: 453 GGDSEAARENCVAVLLTLC--QGNLRFR-GLASEAGAEEVLMEVEENGNERVKEKASKIL 509
Query: 376 VKVLGKASG 384
+ + G G
Sbjct: 510 LAMRGGGGG 518
Score = 89 (36.4 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 4 QELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGH--DTCPATMQILSTK 61
Q + P F CPI+ +M PV + +G T++R S+Q G+ D T LST
Sbjct: 25 QHKHDETPPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLST- 83
Query: 62 EFVPNLTLHRLIAHW 76
+PNL + I W
Sbjct: 84 -VIPNLAMKSTIFSW 97
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 134 (52.2 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P F+C +S VM PV + +G T++R IQ W + G+D+CP + + L PN+ L
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVEL 278
Query: 70 HRLIAHW 76
I+ W
Sbjct: 279 KSQISEW 285
Score = 92 (37.4 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 40/183 (21%), Positives = 82/183 (44%)
Query: 199 SIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQA--LNDAILSILITLSVYRSVK 256
++ IL+ +S ++ + +L S+L LK+ E QA L + + L LS +
Sbjct: 482 ALNILEVLSNHPHGPSKITSSGSL-SSL---LKIVESQAEHLQEQAMITLKNLSSSMEIC 537
Query: 257 AQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGRLALSEEASCAGRVVERV 316
++V L +Q LT L Q + + SI +L + + +GR ++E C + E +
Sbjct: 538 LEMVSLDFIQKLTSFLQ----QKVFCKHSIIILKNLCSTEKGRGCITETPDCLASIAELL 593
Query: 317 MKVGKTAREDAVVVIWSMCCVYKDARVKEAVVNSNGLTKLLLVMQSENEGIVRKMCGDLV 376
+E+A+ ++ +C V K V + + L+++ + V+ +L+
Sbjct: 594 ESNVPEEQENAISILLQLC-VQKIEYCCLVVREATDIYSSLILISNNGTEEVKVSASELL 652
Query: 377 KVL 379
+ L
Sbjct: 653 RAL 655
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 144 (55.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 53/219 (24%), Positives = 114/219 (52%)
Query: 154 VRVLNLIVNENGVKEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESK 213
V V ++VN + EK N++ + +P +++L+ G+++++ S ++ S++L++E+K
Sbjct: 288 VNVTAVLVNLS--LEKSNKVKIVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALEDENK 345
Query: 214 RRVLETENLLSALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILS 273
+ L L +++ + +D+ L+ L LS+ +S + +LV+LG VQ+L ++S
Sbjct: 346 TAIGVLGGL-EPLLHLIRVGTELTRHDSALA-LYHLSLVQSNRGKLVKLGAVQMLLGMVS 403
Query: 274 DSRTQILTVEKSIKMLSIVATCSEGRLALSEEAS--CAGRVVERVMKVGKTAREDAVVVI 331
+ + + + +L +A+C R AL + C V+ R +V ++ RE V V+
Sbjct: 404 LGQM----IGRVLLILCNMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVAVL 459
Query: 332 WSMCCVYKDARVKEAVVNSNGLTKLLLVMQSENEGIVRK 370
+ + R K + +N + +L+ V +S E +K
Sbjct: 460 YGLSHD-GGLRFKGLAMAANAVEELVKVERSGRERAKQK 497
Score = 78 (32.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P F CPIS +M P+ + +G +Y+R+ + G P ST +PNL L
Sbjct: 58 IPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPPD--FST--VIPNLAL 113
Query: 70 HRLIAHWSHQLTVP 83
I W + P
Sbjct: 114 KSAIHSWCERRCFP 127
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 157 (60.3 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 16 CPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLHRLI 73
CPISL++M PV + TG TYDRSSI W SG+ TCP T +IL++ E V N+++ ++I
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVI 351
Score = 62 (26.9 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 31/134 (23%), Positives = 60/134 (44%)
Query: 168 EKLNRLILNTYNCLPLFLEILREGNL-DS-KIGSIKILDSISLDNESKRRVLETENLLSA 225
E +RLI + +P + I++ + DS K ++ + + + +++ RVL +
Sbjct: 502 EDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAA-GAVPI 560
Query: 226 LFDYLKLAE-DQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEK 284
L D L+ E L L+ L L+ Y ++ G +++ +ILS S + V++
Sbjct: 561 LLDLLRSGEISGGLTADCLATLAKLAEYPDGTIGVIRRGGLKLAVKILSSSEDSPVAVKQ 620
Query: 285 SIKMLSIVATCSEG 298
L I+ C G
Sbjct: 621 HCVGL-ILNLCLNG 633
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 127 (49.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHD-TCPATMQILSTKEFVPN 66
+ VP F+C +S +M PV + +G TY++ I WL HD TCP Q+L PN
Sbjct: 72 VEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN--HDLTCPTAKQVLYRVCLTPN 129
Query: 67 LTLHRLIAHW 76
++ LI W
Sbjct: 130 HLINELITRW 139
Score = 85 (35.0 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 41/214 (19%), Positives = 96/214 (44%)
Query: 168 EKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALF 227
EK ++ + +PL + +++G++ ++ + L S+S D +S + ++ L AL
Sbjct: 247 EKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLS-DIDSNKIIIGNSVALKALI 305
Query: 228 DYLKLAED-QALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSI 286
D + +D A +DA+ +++ R + + LG+ + + R +S+
Sbjct: 306 DLIGELDDLSATHDALCAVIDLCCDERENWKKAISLGLAPAAIKNIKARRNLF----ESL 361
Query: 287 KMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAR----EDAVVVIWSMCCVYKDAR 342
L+++ S + E A+ G + + + + KT+ E+AVV++ +M ++
Sbjct: 362 AALALI---SPHERVIQEVANL-GVIYDLLSILRKTSCMVTCENAVVIVGNMYAKSRERS 417
Query: 343 VKEAVVNSNGLTKLLLVMQSENEGI-VRKMCGDL 375
+K+ + K + ++ + V K G L
Sbjct: 418 IKKILAEEENQHKTFTKIATQGSVVAVMKAQGIL 451
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 163 (62.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 32/76 (42%), Positives = 40/76 (52%)
Query: 3 RQELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKE 62
R + + P F CPISL+VMK P G TY+ +I WL+ GH+T P T L +
Sbjct: 318 RSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTK 377
Query: 63 FVPNLTLHRLIAHWSH 78
VPNL L I W H
Sbjct: 378 LVPNLALRSAIQEWLH 393
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 164 (62.8 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 33/76 (43%), Positives = 43/76 (56%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P RCPISL +M PV + +G TY+R I+ W GH+TCP T Q LS PN +
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 71 RLIAHWSHQ--LTVPE 84
LI+ W Q + VP+
Sbjct: 340 ALISSWCEQNGVQVPD 355
Score = 47 (21.6 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 12/64 (18%), Positives = 32/64 (50%)
Query: 172 RLILNTYNCLPLFLEIL----REGNLDS-KIGSIKILDSISLDNESKRRVLETENLLSAL 226
R+++ C+ L+ L E N + K+G++ + + +++DN + ++ ++ L
Sbjct: 457 RILMGENGCVEALLQFLGSALNENNASAQKVGAMALFN-LAVDNNRNKELMLASGIIPLL 515
Query: 227 FDYL 230
+ L
Sbjct: 516 EEML 519
Score = 38 (18.4 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 151 ESAVRVLNLIVNENGVKEKLN 171
+S +LNL++NE G E ++
Sbjct: 610 KSLAVLLNLVLNEAGKDEMVS 630
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 163 (62.4 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 75/341 (21%), Positives = 143/341 (41%)
Query: 15 RCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLHRLIA 74
RCPISL++M PV L +G TYDRSSI W SG+ TCP T + L + V N ++ ++I
Sbjct: 283 RCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQ 342
Query: 75 HWSHQLTV---PEQEVRVWXXXXXXXXXXXXXCVDYLVKVAKFATGCEANR-RFLASYGG 130
+S Q V + + +V ++L + G E + L
Sbjct: 343 SYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLA--GELIKGDEEEMVKALVEIRI 400
Query: 131 FVEAVFGVLNRKRRSEIAVLESAVRVLNLI---VNENGVKEKLN---------RLILNTY 178
+ R E V+ES +++L + EN + +N R++
Sbjct: 401 LTKT--STFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDG 458
Query: 179 NCLPLFLEILREG-NLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAE--D 235
L L +E+L +G +S+ + L +S + R + E + + L +K + D
Sbjct: 459 GGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGD 518
Query: 236 QALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATC 295
A +A+++I L +++ G+V +L ++ S+ +L+ +A
Sbjct: 519 SAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAKMAEY 578
Query: 296 SEGRLALSEEASCAGRV-VERVMKVGKTAREDAVVVIWSMC 335
+G +++ V + +V ++ V ++ ++C
Sbjct: 579 PDGMISVLRRGGLKLAVKILGSSEVSPATKQHCVALLLNLC 619
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 120 (47.3 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 56/252 (22%), Positives = 126/252 (50%)
Query: 144 RSEIAVLESAVRVLNLIVNENGVKEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKIL 203
R I +A ++NL + EK N+L + +PL +++L+ G+ +++ I L
Sbjct: 237 RYNIVQTNAAASIVNLSL------EKPNKLKIVRSGFVPLLIDVLKSGSTEAQEHVIGAL 290
Query: 204 DSISLDNESKRRVLETENLLSALFDYLKLAE-DQALNDAILSILITLSVYRSVKAQLVEL 262
S++++ E+K V+ + L L+ +E ++A DA L+ L LS+ + +++LV+
Sbjct: 291 FSLAVEEENKM-VIGVLGAVEPLLHALRSSESERARQDAALA-LYHLSLIPNNRSRLVKA 348
Query: 263 GMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVG-- 320
G V ++ ++ + + + +L +A CSEG+ A+ + + +V ++ + G
Sbjct: 349 GAVPMMLSMIRSGES----ASRILLLLCNLAACSEGKGAMLD-GNAVSILVGKLRESGGA 403
Query: 321 ---KTAREDAVVVIWSMCCVYKDARVKEAVVNSNGLTKLLL-VMQSEN-EGIVRKMCGDL 375
ARE+ V + ++ + R + + + G ++L +++SE+ G +++ +
Sbjct: 404 ESDAAARENCVGALLTLSV--GNMRFR-GLASEAGAEEILTEIVESESGSGRLKEKASKI 460
Query: 376 VKVL-GKASGLG 386
++ L G S G
Sbjct: 461 LQTLRGGGSEFG 472
Score = 81 (33.6 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQ--HWLESGHDTCPATMQILSTKEFVPNLT 68
P F CPI+ +M PV + +G T++R S+Q L T LST +PNL
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLST--VIPNLA 68
Query: 69 LHRLIAHW 76
+ I W
Sbjct: 69 MKSTILSW 76
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 115 (45.5 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 14 FRCPISLDVMKSPVSLCTGVTYDRSSIQHWL----ESGHD-TCPATMQILSTKEFVPNLT 68
F CP++ VM +PV+L G T++R +I+ W E+G +CP T + LS + P++
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPSIA 88
Query: 69 LHRLIAHW 76
L I W
Sbjct: 89 LRNTIEEW 96
Score = 93 (37.8 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 38/168 (22%), Positives = 80/168 (47%)
Query: 105 VDYLVKVAKFATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNEN 164
V L +++K CE + S G + + G+ + K + ++ +E A + L N
Sbjct: 209 VSVLFELSKSEALCEK----IGSIHGAIILLVGLTSSKSEN-VSTVEKADKTLT---NLE 260
Query: 165 GVKEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLS 224
+E + ++ +N PL ++L EG+ ++K+ L ++L+N+ K V+ + + S
Sbjct: 261 RSEENVRQMAING-RLQPLLAKLL-EGSPETKVSMAFYLGVLALNNDVK--VIVAQTVGS 316
Query: 225 ALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRIL 272
+L D ++ D + +A L L +S + L+ G++ L + L
Sbjct: 317 SLIDLMR-TRDMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDL 363
Score = 69 (29.3 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 39/198 (19%), Positives = 92/198 (46%)
Query: 169 KLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSI-SLDNESKRRVLETENLLSALF 227
K+ + + N + L ++L+ + + + +++ L + D ESK V E + + + +
Sbjct: 137 KIRQRVCNP-QLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRT-IV 194
Query: 228 DYLKLAEDQALNDAILSILITLSVYRSVKAQLVEL-GMVQILTRILSDSRTQILTVEKSI 286
+L E +A +S+L LS ++ ++ + G + +L + S + TVEK+
Sbjct: 195 KFLS-QEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKAD 253
Query: 287 KMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEA 346
K L+ + E + + GR+ + K+ + + E V + + + + + VK
Sbjct: 254 KTLTNLERSEEN----VRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKVI 309
Query: 347 VVNSNGLTKLLLVMQSEN 364
V + G + L+ +M++ +
Sbjct: 310 VAQTVG-SSLIDLMRTRD 326
Score = 60 (26.2 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 30/127 (23%), Positives = 58/127 (45%)
Query: 111 VAKFATG-CEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEK 169
+ K G C F G V+ + +L+ + V+ A+ L+ ++ E+G+
Sbjct: 662 ICKIHQGICSVRESFCLVEGQAVDKLVDLLDHENDK---VVGPALAALSTLL-EDGLDVV 717
Query: 170 LN-RLILNTYNCLPLFLEILREGNLDS-KIGSIKILDSISLDNESKRRVLETENLLSALF 227
RLI P+ L +L E ++ +I ++ +++ I E R V E +N+ +AL
Sbjct: 718 QGVRLIDEADGITPI-LNVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVTAALV 776
Query: 228 DYLKLAE 234
D + A+
Sbjct: 777 DAFQNAD 783
Score = 50 (22.7 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 30/130 (23%), Positives = 60/130 (46%)
Query: 184 FLEILREGNLDSKIGSIKILDSIS--LDNESKRRVLETENLLSALFDYLK-----LAEDQ 236
F+EI N D ++ SIK+L +IS + E + T L +L + + E+Q
Sbjct: 462 FVEI--HENDDLRLASIKLLHNISPHMSEELANALRSTVGQLGSLVSIISENTPTITEEQ 519
Query: 237 ALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLS-IVATC 295
A +L+ L + +++ L E +I+++I+ + +I + L +V+
Sbjct: 520 AAAAGLLAELPERDLVLTMRL-LREGAFEKIISKIVGIRQGEIRGIRFERTFLEGLVSIL 578
Query: 296 SEGRLALSEE 305
+ AL++E
Sbjct: 579 ARITFALTKE 588
Score = 37 (18.1 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 6/14 (42%), Positives = 12/14 (85%)
Query: 312 VVERVMKVGKTARE 325
+VER++++ + ARE
Sbjct: 751 MVERILRIEEIARE 764
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 148 (57.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P+ + CPI +VMK P+ G TY+ +I+ WL +GHDT P T + +PN LH
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 71 RLIAHWSHQ 79
I W +Q
Sbjct: 796 LAIQDWQNQ 804
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 109 (43.4 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 14 FRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDT-----CPATMQILSTKEFVPNLT 68
F CP++ +VM PV+L G T++R +I+ W + D+ CP T Q L++ + ++
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIA 86
Query: 69 LHRLIAHW 76
L I W
Sbjct: 87 LRNTIEEW 94
Score = 86 (35.3 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 41/169 (24%), Positives = 77/169 (45%)
Query: 105 VDYLVKVAKFATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVL-NLIVNE 163
V L +++K CE + S G + + G L ++++E A R L N+ +E
Sbjct: 207 VSLLFELSKSEALCEK----IGSIHGALILLVG-LTSSNSENVSIVEKADRTLENMERSE 261
Query: 164 NGVKEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLL 223
V++ + +Y L L L EG+ ++K+ L + L+N+ K VL + +
Sbjct: 262 EIVRQ------MASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVK--VLVAQTVG 313
Query: 224 SALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRIL 272
S+L D ++ + D +A L L +S + L+ G++ L + L
Sbjct: 314 SSLVDLMR-SGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDL 361
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 145 (56.1 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 27/66 (40%), Positives = 37/66 (56%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P+ F CPIS +VM+ P G TY+ S++ WL++GH+T P T L+ VPN L
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 71 RLIAHW 76
I W
Sbjct: 558 SAIQEW 563
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 118 (46.6 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 40/177 (22%), Positives = 94/177 (53%)
Query: 168 EKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALF 227
+K N+L + +P+ +++L+ G+ +++ + + S+SL++++K + L L
Sbjct: 296 DKKNKLTIVRLGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPI-GVLGALQPLL 354
Query: 228 DYLKLAE-DQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSI 286
L+ AE D+ +D+ L+ L L++ ++ +++LV LG V L ++ + +++
Sbjct: 355 HALRAAESDRTRHDSALA-LYHLTLNQTNRSKLVRLGAVPALFSMVRSGES----ASRAL 409
Query: 287 KMLSIVATCSEGRLALSEEASCA---GRVVER------VMKVGKTAREDAVVVIWSM 334
++ +A CSEGR A+ + + A G++ E + +ARE+ V ++++
Sbjct: 410 LVICNLACCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFAL 466
Score = 70 (29.7 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQ 41
P F CPIS VM PV + +G T++R +Q
Sbjct: 34 PVEFLCPISKSVMSDPVVVSSGQTFERVCVQ 64
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 28/69 (40%), Positives = 38/69 (55%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P+ F CP+ DVMK P G TYDR +I+ W+E+ H T P T L +PN TL+
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWMEN-HRTSPVTNSPLQNVNLLPNHTLY 808
Query: 71 RLIAHWSHQ 79
I W ++
Sbjct: 809 AAIVEWRNR 817
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 28/66 (42%), Positives = 36/66 (54%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P F CP+ DVM P G TYDR +I+ WL+ H+T P T L +K +PN TL+
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKE-HNTSPMTDSPLHSKNLLPNYTLY 825
Query: 71 RLIAHW 76
I W
Sbjct: 826 TAIMEW 831
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 6 LYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVP 65
+Y P+ F CPI+ ++MK PV G +Y+R +I+ W+ + + T P T L T P
Sbjct: 413 VYNGTPDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTP 472
Query: 66 NLTLHRLIAHWS 77
N TL I WS
Sbjct: 473 NRTLKMAIFRWS 484
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 137 (53.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 26/66 (39%), Positives = 33/66 (50%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P F CPI+ D+M+ P G TY+ +I W E GH+T P + L VPNL L
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 71 RLIAHW 76
I W
Sbjct: 414 SAIQEW 419
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 134 (52.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 14 FRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLHRLI 73
F+CPIS+++M+ P G TY+ + WL SG T P T + L VPN TL +I
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRIII 296
Query: 74 AHW 76
W
Sbjct: 297 KDW 299
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 133 (51.9 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 26/72 (36%), Positives = 34/72 (47%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
I P F CPIS D+M++P G TY+ + WL G + P T L + +PNL
Sbjct: 292 IEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNL 351
Query: 68 TLHRLIAHWSHQ 79
L I W Q
Sbjct: 352 VLRSAIKDWLQQ 363
>TAIR|locus:2075457 [details] [associations]
symbol:AT3G02840 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0051707 "response to
other organism" evidence=ISS] [GO:0010193 "response to ozone"
evidence=IEP] [GO:0005634 "nucleus" evidence=IDA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR016024 GO:GO:0005634
GO:GO:0005737 EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010193 EMBL:AC018363 UniGene:At.41071
UniGene:At.48613 EMBL:BT002533 EMBL:BT008474 EMBL:AK118550
IPI:IPI00547655 RefSeq:NP_566184.1 ProteinModelPortal:Q9M8S5
STRING:Q9M8S5 EnsemblPlants:AT3G02840.1 GeneID:821225
KEGG:ath:AT3G02840 TAIR:At3g02840 OMA:RESVEGW PhylomeDB:Q9M8S5
ProtClustDB:CLSN2917076 ArrayExpress:Q9M8S5 Genevestigator:Q9M8S5
Uniprot:Q9M8S5
Length = 379
Score = 133 (51.9 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 59/291 (20%), Positives = 132/291 (45%)
Query: 104 CVDYLVKVAKFATGCEANRRFLASYGGFV--EAVFGVLNRKRRSEIAVLESAVRVLNLIV 161
C++ + K+ G + N++ L G + + F R + +LE + VL+ +
Sbjct: 74 CLEIVSKIKNLGRGGDTNKKCLVQNGSVLALSSCFERFAAARDGHMRLLEEILFVLSSWL 133
Query: 162 NENGVKEKLNRL-ILNTYNCLPLFLEILREGNLDSKI---GSIKILDSISLDNESKRRVL 217
N E N++ + NCL FL G D+K + I + I++D +
Sbjct: 134 PLNR-SEGFNKMGSTASLNCLVRFLN----GK-DAKTRQNAAFCIREVIAVDKRYVYALT 187
Query: 218 ETENLLSALFDYLKLAEDQALNDAILSILI-TLSVYRSVKAQLVELGMVQILTRILSDSR 276
+ E L ++ + + A L ++ +S + + V+LG+V+++T ++ ++
Sbjct: 188 DVEGACEGLVKIIRDSVSTSSTKASLMVIYRAISSNDKITEKFVKLGLVELITEMMVNNA 247
Query: 277 TQILTVEKSIKMLSIVATCS--EGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSM 334
+ + E+S+ +L+ ATC +G+ + A +V+++++V A + +V ++W +
Sbjct: 248 EKSVC-ERSLVVLN--ATCDNEQGKEDVLRNALIVPLLVKKILRVSDLATQCSVSILWKL 304
Query: 335 CCVYKDA----RVKEAVVNSNGLTKLLLVMQSENEGIVRKMCGDLVKVLGK 381
KD R+ + KLL+++Q E ++ +L++ L +
Sbjct: 305 WKNKKDGECDDRLLVEALQVGAFEKLLVLLQVGCEDKTKEKASELLRNLNR 355
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P+ F CPI+ ++MK PV G +Y++ ++++W+ T P T IL + PN TL
Sbjct: 404 IPDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLILPSMVLTPNRTL 463
Query: 70 HRLIAHW--SHQ 79
I+ W +HQ
Sbjct: 464 KMAISRWLETHQ 475
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 23/69 (33%), Positives = 40/69 (57%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
+AVP+ F CPI+ ++MK PV G +Y++ ++++W+ + + P T L + PN
Sbjct: 402 VAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPSLVLTPNR 461
Query: 68 TLHRLIAHW 76
TL I+ W
Sbjct: 462 TLKMAISRW 470
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 4 QELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEF 63
+ L +P+ F CPI+ ++MK PV G +Y++ ++++W+ T P T +L +
Sbjct: 398 KSLSSGIPDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVL 457
Query: 64 VPNLTLHRLIAHW--SHQ 79
PN TL I W +HQ
Sbjct: 458 TPNRTLKMAINRWLETHQ 475
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 131 (51.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 32/79 (40%), Positives = 39/79 (49%)
Query: 3 RQELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKE 62
R E IA P F CPI +VM+ P G TY+ +I+ WL+S HDT P T LS
Sbjct: 757 RNEHRIAPP-YFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTS 815
Query: 63 FVPNLTLHRLIAHW-SHQL 80
+ N L I W H L
Sbjct: 816 LIANHALRSAIQEWLQHHL 834
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 126 (49.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P+ F CPI+ ++MK P+ G +Y++ ++++W+ T P T +LS+ PN TL
Sbjct: 403 IPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTL 462
Query: 70 HRLIAHW---SHQ 79
I W +HQ
Sbjct: 463 KMAIDRWLSETHQ 475
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 126 (49.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P+ F CPI+ ++MK P+ G +Y++ ++++W+ T P T +LS+ PN TL
Sbjct: 404 IPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTL 463
Query: 70 HRLIAHW---SHQ 79
I W +HQ
Sbjct: 464 KMAIDRWLSETHQ 476
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 125 (49.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 4 QELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEF 63
+ L +P+ F CPI+ ++MK PV G +Y+R +++ W+ T P T L +
Sbjct: 398 ESLSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVL 457
Query: 64 VPNLTLHRLIAHW--SHQ 79
PN TL I W +HQ
Sbjct: 458 TPNRTLKMAINRWLETHQ 475
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P + CPI ++M+ P G TY+R +I+ W++ D P T L + PN TL
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLR 768
Query: 71 RLIAHW 76
I W
Sbjct: 769 SAIREW 774
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 120 (47.3 bits), Expect = 0.00029, P = 0.00029
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P+ F CPI+ ++MK PV G +Y+R +++ W+ T P T L + PN TL
Sbjct: 402 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTL 461
Query: 70 HRLIAHW 76
I W
Sbjct: 462 KMAINRW 468
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 121 (47.7 bits), Expect = 0.00046, P = 0.00046
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P F CPI+ DVM++P G TY++ +I+ WL+ H + P T + +PN +L
Sbjct: 726 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHKS-PMTDLPFPSDSLLPNHSLL 784
Query: 71 RLIAHWSHQL 80
I W QL
Sbjct: 785 SAIKEWRSQL 794
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
+ P+ + CPI ++M+ P G TY+R +I WLE H+ P T Q L + PN
Sbjct: 723 LRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEK-HNISPVTRQKLDHFKLTPNH 781
Query: 68 TLHRLIAHWSHQL 80
TL I W ++
Sbjct: 782 TLRSAIRDWKSRV 794
>TAIR|locus:2827868 [details] [associations]
symbol:CSI1 "cellulose synthase-interactive protein 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=IMP] [GO:0009832
"plant-type cell wall biogenesis" evidence=RCA] [GO:0016049 "cell
growth" evidence=RCA] [GO:0030243 "cellulose metabolic process"
evidence=RCA] [GO:0051211 "anisotropic cell growth" evidence=IMP]
InterPro:IPR000225 InterPro:IPR000008 InterPro:IPR008973
InterPro:IPR016024 Pfam:PF00168 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 SMART:SM00239 GO:GO:0005886 GO:GO:0009506
GO:GO:0005737 EMBL:CP002685 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR018029 SUPFAM:SSF49562
PROSITE:PS50004 GO:GO:0030244 GO:GO:0051211 IPI:IPI00540999
RefSeq:NP_179803.4 UniGene:At.24341 PRIDE:F4IIM1 DNASU:816747
EnsemblPlants:AT2G22125.1 GeneID:816747 KEGG:ath:AT2G22125
OMA:RGARYSA Uniprot:F4IIM1
Length = 2150
Score = 124 (48.7 bits), Expect = 0.00069, P = 0.00069
Identities = 50/246 (20%), Positives = 111/246 (45%)
Query: 119 EANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLNRLILNTY 178
E ++ G +AV +++ R + V A VL + EN ++ K+ +L
Sbjct: 92 EMRENAFSAVGSHSQAVPVLVSLLRSGSVGVKIQAATVLGSLCKENELRVKV---LLG-- 146
Query: 179 NCLPLFLEILREGNLDSKIGSIKILDSIS---LDNESKRRVLETENLLSALFDYLKLAED 235
C+P L +L+ +++ +I + K + ++S + + ++ TE ++ L+D L+
Sbjct: 147 GCIPPLLGLLKSSSVEGQIAAAKTIYAVSEGGVKDHVGSKIFSTEGVVPVLWDQLRSGNK 206
Query: 236 QALNDAILS-ILITLS-VYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVA 293
+ D +L+ L LS ++ + G V +L ++L+ ++ L+ ++ L
Sbjct: 207 KGEVDGLLTGALKNLSSTTEGFWSETIRAGGVDVLVKLLTSGQSSTLS---NVCFLLACM 263
Query: 294 TCSEGRLALSEEASCAGRVVERVMKVGKTA--REDAVVVIWSMCCVYKDARVKEAVVNSN 351
+ + S + + + +++ G A R +A + S+ K+A K + NSN
Sbjct: 264 MMEDASVCSSVLTADITKQLLKLLGSGNEAPVRAEAAAALKSLSAQSKEA--KREIANSN 321
Query: 352 GLTKLL 357
G+ L+
Sbjct: 322 GIPVLI 327
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 117 (46.2 bits), Expect = 0.00072, P = 0.00072
Identities = 25/71 (35%), Positives = 34/71 (47%)
Query: 9 AVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLT 68
+VP F CPIS+++MK P G TY+ +I+ W + G P T L VPN
Sbjct: 434 SVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVPNRV 493
Query: 69 LHRLIAHWSHQ 79
L I + Q
Sbjct: 494 LRSFIHGYLQQ 504
>WB|WBGene00000500 [details] [associations]
symbol:chn-1 species:6239 "Caenorhabditis elegans"
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040011 "locomotion"
evidence=IGI;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0018991 "oviposition" evidence=IGI] [GO:0045214
"sarcomere organization" evidence=IGI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051087
"chaperone binding" evidence=IPI] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0018991 GO:GO:0002119 GO:GO:0040011 Gene3D:1.25.40.10
GO:GO:0045214 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000209 GO:GO:0000151 GO:GO:0051865 KO:K09561
GeneTree:ENSGT00650000093277 EMBL:FO081495 EMBL:AF303269 PIR:T25874
RefSeq:NP_491781.2 UniGene:Cel.19411 ProteinModelPortal:G5ECY6
SMR:G5ECY6 EnsemblMetazoa:T09B4.10.1 EnsemblMetazoa:T09B4.10.2
GeneID:172303 KEGG:cel:CELE_T09B4.10 CTD:172303 WormBase:T09B4.10
OMA:HSWAYKL NextBio:874925 Uniprot:G5ECY6
Length = 266
Score = 112 (44.5 bits), Expect = 0.00080, P = 0.00080
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSI-QHWLESGHDTCPATMQILSTKEFVPNLT 68
VP + I+L++MK PV + +G+TYDR I QH GH P T + L+ E +PN
Sbjct: 185 VPEMLCGKITLELMKEPVIVPSGITYDREEIVQHLRRIGHFD-PVTRKPLTENEIIPNYA 243
Query: 69 LHRLI 73
L +I
Sbjct: 244 LKEVI 248
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 398 385 0.00092 117 3 11 22 0.50 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 65
No. of states in DFA: 615 (65 KB)
Total size of DFA: 223 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.21u 0.10s 33.31t Elapsed: 00:00:01
Total cpu time: 33.22u 0.10s 33.32t Elapsed: 00:00:01
Start: Tue May 21 02:56:02 2013 End: Tue May 21 02:56:03 2013