BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015939
(398 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 292 bits (748), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 266/421 (63%), Gaps = 39/421 (9%)
Query: 5 ELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFV 64
E YI VP+ F+CPISLDVM+SPVSLCTGVTYDR+SIQ WL+ G++TCPATMQ+L TK+FV
Sbjct: 7 ETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFV 66
Query: 65 PNLTLHRLIAHWSHQL-----------------TVP-EQEVRVWIEKIKSENESENSCVD 106
PNLTL RLI WS + VP ++EV V +E++ S ++
Sbjct: 67 PNLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMS--------LE 118
Query: 107 YLVKVAKFATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGV 166
L+K+ +F ++NR FL+ FV + ++ R ++++I ++ A+R+L+ I +
Sbjct: 119 NLMKIVRFVKDSDSNREFLSKKMEFVPMLVDII-RTKKTKIELVIMAIRILDSIKVD--- 174
Query: 167 KEKLNRLIL--NTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLS 224
+E+L+ L+L + +CL L ++ GNL+SKI S+++LD IS D +SK + E + +L+
Sbjct: 175 RERLSNLMLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLT 234
Query: 225 ALFDYLKLAE--DQALNDAILSILITLSVYRSVKAQLVEL-GMVQILTRILSDSRTQILT 281
+ + + E D +L +A LS LIT+S + V+++L+ + +I +L+++ T +
Sbjct: 235 EMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAV 294
Query: 282 VEKSIKMLSIVATCSEGRLAL--SEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYK 339
EKS+K+L +++ EGRL + + C VV++++KV TA E AV ++W +C V++
Sbjct: 295 TEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFR 354
Query: 340 -DARVKEAVVNSNGLTKLLLVMQSENEGIVRKMCGDLVKVLG-KASGLGNYQTKTAHIMP 397
D V+E V SNG+TKLL+V+QS +VR+M DL+KVL +S L Y+TKT HIMP
Sbjct: 355 EDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFNSSALAAYETKTTHIMP 414
Query: 398 Y 398
+
Sbjct: 415 F 415
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 283 bits (725), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/417 (40%), Positives = 248/417 (59%), Gaps = 27/417 (6%)
Query: 1 MVRQELYIA-VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILS 59
M +LYI VP F+CPISLDVMKSPVSL TGVTYDR SIQ WL+ G++TCPATMQIL
Sbjct: 1 MRSDDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQ 60
Query: 60 TKEFVPNLTLHRLIAHWSHQL------------TVPEQEVRVWIEKIKSENESENSCVDY 107
KEFVPNLTLHRLI HWS + T E+ IE+ + EN++ +
Sbjct: 61 NKEFVPNLTLHRLIDHWSDSINRRADSESPESDTPTRDEINAAIERFRIENDARS----- 115
Query: 108 LVKVAKFATGCEANRRFLASYGGFVEAVFGVLNRKRR---SEIAVLESAVRVLNLIVNEN 164
K+ +FA + NR FLA FV + +++ R S++ ++ AV++L++I +
Sbjct: 116 --KILRFARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKI 173
Query: 165 GVKEKLNRLIL-NTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLL 223
+ +L+ LIL N +CL F +++ GN KI +L+ I++D ESK + + E L+
Sbjct: 174 FDRRRLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLV 233
Query: 224 SALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVE 283
+ + + D +L +A LS+LI ++ + VK L+ +V LT +L+D T + E
Sbjct: 234 TEIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVTE 293
Query: 284 KSIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARV 343
K +K+L +++C EGR + + C VV ++MKV A E AV V+WS+C ++K+ +
Sbjct: 294 KCLKLLEAISSCKEGRSEIC-DGVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKKA 352
Query: 344 KEAVVNSNGLTKLLLVMQSENEGIVRKMCGDLVKVL--GKASGLGNYQTKTAHIMPY 398
++AV+ NG+TK+LL++QS VR M DL+KV S L Y+TKT HIMP+
Sbjct: 353 QDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVNSRSCLSVYETKTTHIMPF 409
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 258 bits (658), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 246/421 (58%), Gaps = 24/421 (5%)
Query: 1 MVRQELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILST 60
M + +L I VP FRCPISLDVMKSPVSLCTGVTYDR+SIQ WL+ G++TCPATMQIL
Sbjct: 1 MRKDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQN 60
Query: 61 KEFVPNLTLHRLIAHWSH-----------QLTVPEQ-EVRVWIEKIKSENESENSCVDYL 108
K+F+PN TL RLI WS +L P + E+ I+++K E E E + L
Sbjct: 61 KDFIPNRTLQRLIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVKIEKE-ERDDREVL 119
Query: 109 VKVAKFATGCEANRRFLASYGGFVEAVFGVLNR-----KRRSEIAVLESAVRVLNLIVNE 163
K+ +F + NR FLA FV+ + ++N+ ++ V++ AV++L+ I ++
Sbjct: 120 SKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRSK 179
Query: 164 NGVKEKLNRLIL-NTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENL 222
+ + + LIL N + L + + + + GN++ KI +L+ I++D ESK + E + L
Sbjct: 180 VSDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERDGL 239
Query: 223 LSALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTR--ILSDSRTQIL 280
++ L + D +L ++ LS LI +S + VK L+ ++ +T+ S S +
Sbjct: 240 ITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLSVS 299
Query: 281 TVEKSIKMLSIVATCSEGRLAL-SEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYK 339
EK +K+L I+A+ EGR + + C VV+++MKV A E AV V+WS+ ++K
Sbjct: 300 VTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVSYLFK 359
Query: 340 DARVKEAVVNSNGLTKLLLVMQSENEGIVRKMCGDLVKVL--GKASGLGNYQTKTAHIMP 397
+ + EAV + NG+TK+LL++QS VR+M DL+KV S L Y TKT HIMP
Sbjct: 360 EDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFKVNSRSCLSAYDTKTTHIMP 419
Query: 398 Y 398
+
Sbjct: 420 F 420
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 172/345 (49%), Gaps = 32/345 (9%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P FRCPISL++MK PV + TG TY+RSSIQ WL++GH TCP + + L PN L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 70 HRLIAHW--SHQLTVPEQEVRVWIEKIKSENESENSCVDYLVKVAKFATGCEANRRFLAS 127
LIA W S+ + +P+ + KI + S+ L + K A G +R A
Sbjct: 308 KSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAG 367
Query: 128 YGGFVEAVFGVLNRKRRSEIAVL----------------ESAVRVLNLIVNENGVKEKLN 171
+ A V NR +E + S +LNL +NE N
Sbjct: 368 ELRLL-AKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEG------N 420
Query: 172 RLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLK 231
+ + + +E+L+ G+++++ + L S+S+ +E+K + + AL L+
Sbjct: 421 KGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIG-AAGAIQALISLLE 479
Query: 232 LAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSI 291
+ DA +I L +Y+ K++ V+ G+V LTR+L D+ + V++++ +L+I
Sbjct: 480 EGTRRGKKDAATAIF-NLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGM--VDEALAILAI 536
Query: 292 VATCSEGRLALSEEASCAGRVVERVMKVGKT-AREDAVVVIWSMC 335
++T EG+ A++E S V+ +++ G RE+A ++W +C
Sbjct: 537 LSTNQEGKTAIAEAESIP--VLVEIIRTGSPRNRENAAAILWYLC 579
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 170/345 (49%), Gaps = 34/345 (9%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P+ FRCPISL++M+ PV + +G TY+RS IQ WL+SGH TCP T Q LS PN L
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVL 287
Query: 70 HRLIAHW--SHQLTVPEQEVRVWIEKIKSENESENSCVDYLVKVAKFATGCEA------- 120
LI+ W ++ + +P+ + +K ++ +++ + L+ + E
Sbjct: 288 KSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEI 347
Query: 121 --------NRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVR-VLNLIVNENGVKEKLN 171
N R + G + + +L+ S+ E AV +LNL ++EN N
Sbjct: 348 RLLAKRNVNNRICIAEAGAIPLLVNLLS---SSDPRTQEHAVTALLNLSIHEN------N 398
Query: 172 RLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLK 231
+ + + +P +E+L+ G+++++ + L S+S+ +E+K + + L + L
Sbjct: 399 KASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENK-VTIGAAGAIPPLINLLC 457
Query: 232 LAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSI 291
+ DA +I L +Y+ K + V+ G+V L L D + +++++ +LSI
Sbjct: 458 DGSPRGKKDAATAIF-NLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGM--IDEALSLLSI 514
Query: 292 VATCSEGRLALSEEASCAGRVVERVMKVGKT-AREDAVVVIWSMC 335
+A EG++ ++ V V+K G RE+A ++W +C
Sbjct: 515 LAGNPEGKIVIARSEPIPPLV--EVIKTGSPRNRENAAAILWLLC 557
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 175/346 (50%), Gaps = 36/346 (10%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
+ +P F CP+SL++MK PV + TG TY+R+ IQ W++ G+ TCP T Q L PN
Sbjct: 239 LTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNY 298
Query: 68 TLHRLIAHW--SHQLTVPE-------------QEVRVWIEKIKSEN-ESENSCVDYLVKV 111
L LI+ W H + P +R ++++ S + E + V + +
Sbjct: 299 VLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSL 358
Query: 112 AKFATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVR-VLNLIVNENGVKEKL 170
+K +T + R L + G + + +L + ++A E+A+ VLNL + EN
Sbjct: 359 SKRST----DNRILIAEAGAIPVLVNLLTSE---DVATQENAITCVLNLSIYEN------ 405
Query: 171 NRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYL 230
N+ ++ + +++LR G ++++ + L S+SL +E+K ++ + AL D L
Sbjct: 406 NKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENK-IIIGGSGAIPALVDLL 464
Query: 231 KLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLS 290
+ + DA + L L +Y K + V G+V L ++LSDS T+ V++++ +LS
Sbjct: 465 ENGTPRGKKDAA-TALFNLCIYHGNKGRAVRAGIVTALVKMLSDS-TRHRMVDEALTILS 522
Query: 291 IVATCSEGRLALSEEASCAGRVVERVMKVGKT-AREDAVVVIWSMC 335
++A + + A+ + + + +++ +T RE+A ++ S+C
Sbjct: 523 VLANNQDAKSAIVKANTLPALI--GILQTDQTRNRENAAAILLSLC 566
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 187/378 (49%), Gaps = 23/378 (6%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P++F CPISL+ M+ PV+LCTG TY+RS+I W GH TCP TMQ L PN TL
Sbjct: 60 IPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTL 119
Query: 70 HRLIAHWSHQLTV-----PEQEVRVWIEKIKSENESENSC-VDYLVKVAKFATGCEANRR 123
H+LI W Q V E IE + + +++ V L ++ + ++
Sbjct: 120 HQLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLRKAKGKAKVHALSELKQVVMAHAIAKK 179
Query: 124 FLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLNRLILNTYNCLPL 183
+ GG V L S E+ ++NL ++ + ++ L + L
Sbjct: 180 TVVDEGGVF--VISSLLSPFTSHAVGSEAIAILVNLELDSD------SKAGLMQPARVSL 231
Query: 184 FLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDAI- 242
+++L +G++++KI +++ + + + ++ + +LL L ++L +D+ + +
Sbjct: 232 MVDMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGL---MRLVKDRRRRNGVS 288
Query: 243 --LSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGRL 300
L++L ++SV++ V+ LV +G V L +L + L E ++ +L + SEGR+
Sbjct: 289 PALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECL--ESALFVLDSLCLESEGRI 346
Query: 301 ALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVVNSNGLTKLLLVM 360
AL + + V +MKV + A+ ++WS+C + + V KLLLV+
Sbjct: 347 ALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLASE-ECSSLAVEVGLAAKLLLVI 405
Query: 361 QSENEGIVRKMCGDLVKV 378
QS + +++ +L+K+
Sbjct: 406 QSGCDPALKQRSAELLKL 423
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 201/403 (49%), Gaps = 34/403 (8%)
Query: 4 QELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEF 63
+E+ I +P+ F+CPIS ++MK PV + +G+TYDR +I+ W ESG+ TCP T +L++ E
Sbjct: 27 EEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQ 86
Query: 64 VPNLTLHRLIAHW-------------SHQLTVPEQEVRVWIEKIKSENESEN--SCVDYL 108
+PN T+ R+I W + ++ V +V E++ + + +C++ +
Sbjct: 87 IPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMV 146
Query: 109 VKVAKFATGCEANRRFLASYG-GFVEAV-FGVLNRKRRSEIAVLESAVRVLNLIVNENGV 166
K+ + E NR+ + G G V V F + + + +LE V VL ++ G+
Sbjct: 147 TKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASL-LLEETVSVLTWML-PIGL 204
Query: 167 KEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSAL 226
+ + +++N L +E+LR G+ ++ ++L+ N + L N +
Sbjct: 205 EGQSKLTTTSSFNRL---VELLRNGDQNAAFLIKELLEL----NVTHVHALTKINGVQEA 257
Query: 227 FDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSI 286
F + D ++++SI + + ++ +EL +V I +L DS + EK++
Sbjct: 258 F-MKSINRDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDSENSV--CEKAL 314
Query: 287 KMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEA 346
+L+++ EGR + +V++++K+ + ++D V V+W +C + V+EA
Sbjct: 315 TVLNVICETKEGREKVRRNKLVIPILVKKILKI--SEKKDLVSVMWKVCKSGDGSEVEEA 372
Query: 347 VVNSNGLTKLLLVMQ-SENEGIVRKMCGDLVKVLGKASGLGNY 388
+ KL++++Q EG K+ +L+K++ K + +
Sbjct: 373 -LRLGAFKKLVVMLQVGCGEGTKEKVT-ELLKMMNKVMKMNGF 413
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 171/346 (49%), Gaps = 35/346 (10%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P+ FRCPISL++M+ PV + +G TY+R+ I+ W+E GH TCP T Q L++ PN L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 70 HRLIAHW--SHQLTVPEQEVRVWIEKIK--SENESENSCVDYLVKVA-------KFATG- 117
LIA W ++ + P+ + K+ S N D + ++A + A G
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGE 375
Query: 118 ------CEANRRFLASYGGFVEAVFGVLNRK--RRSEIAVLESAVRVLNLIVNENGVKEK 169
A+ R + G + + G+L+ R E S +LNL + EN
Sbjct: 376 IRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQE----HSVTALLNLSICEN----- 426
Query: 170 LNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDY 229
N+ + + +P +++L++G+++++ + L S+S+ +E+K + + L
Sbjct: 427 -NKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENK-VTIGALGAIPPLVVL 484
Query: 230 LKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKML 289
L + DA + L L +Y+ K + + G++ LTR+L++ + + V++++ +L
Sbjct: 485 LNEGTQRGKKDAA-TALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGM--VDEALAIL 541
Query: 290 SIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMC 335
+I+++ EG+ A+ + +VE + RE+A V+ +C
Sbjct: 542 AILSSHPEGK-AIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLC 586
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 184/380 (48%), Gaps = 27/380 (7%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P++F CPISL+ M+ PV+LCTG TY+R +I W GH TCP TMQ L PN TL
Sbjct: 64 IPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTL 123
Query: 70 HRLIAHWSHQLTV-----PEQEVRVWIEKIKSENESENSC-VDYLVKVAKFATGCEANRR 123
H LI W Q V E IE + + +++ V L ++ + R+
Sbjct: 124 HHLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLKKAKGQARVHALSELKQIVIAHLMARK 183
Query: 124 FLASYGG--FVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLNRLILNTYNCL 181
+ GG + ++ G AV V +L + ++ K L + +
Sbjct: 184 TVVEEGGVSVISSLLGPFTSH-----AVGSEVVAILVSLDLDSDSKSGLMQ-----PAKV 233
Query: 182 PLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDA 241
L +++L +G+ ++KI +++ + + + ++ + +LL L ++L +D+ +
Sbjct: 234 SLIVDMLNDGSNETKINCARLIRGLVEEKGFRAELVSSHSLLVGL---MRLVKDKRHRNG 290
Query: 242 I---LSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEG 298
+ L +L +SV++ V++ +V +G V L IL + L E ++ +L + T EG
Sbjct: 291 VSPALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECL--ELALFVLDALCTDVEG 348
Query: 299 RLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVVNSNGLTKLLL 358
R+A+ + A+ V +M+V + A+ ++WS+C + + V KLLL
Sbjct: 349 RVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLAPE-ECSPLAVEVGLAAKLLL 407
Query: 359 VMQSENEGIVRKMCGDLVKV 378
V+QS + +++ +L+K+
Sbjct: 408 VIQSGCDAALKQRSAELLKL 427
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 170/349 (48%), Gaps = 39/349 (11%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
I +P+ FRCPISL++MK PV + TG TY+R+ I+ W+ SGH TCP T Q +ST PN
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNY 330
Query: 68 TLHRLIAHW--SHQLTVPEQEV-------------RVWIEKIKS-----ENESENSCVDY 107
L LI+ W ++ + P++ R I+ + S + E + S
Sbjct: 331 VLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAE 390
Query: 108 LVKVAKFATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVR-VLNLIVNENGV 166
L +AK NR +A G + + + R++ E AV +LNL ++E+
Sbjct: 391 LRLLAKRNAN---NRICIAEAGAIPLLLSLLSSSDLRTQ----EHAVTALLNLSIHED-- 441
Query: 167 KEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSAL 226
N+ + + +P + +L+ G+++++ + L S+S+ +E K + + AL
Sbjct: 442 ----NKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYK-VTIGGMGAIPAL 496
Query: 227 FDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSI 286
L + DA + L L +Y+ K + + G+V ++ ++++ ++ ++++
Sbjct: 497 VVLLGEGSQRGKKDAA-AALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALM--DEAM 553
Query: 287 KMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMC 335
+LSI+++ EG+ A+ A +VE + RE+A V+ +C
Sbjct: 554 AILSILSSHPEGKAAIG-AAEPVPVLVEMIGSGTPRNRENAAAVMLHLC 601
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 170/349 (48%), Gaps = 39/349 (11%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
I +P+ FRCPISL++MK PV + TG TY+R+ I+ W+ SGH TCP T Q +ST PN
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNY 330
Query: 68 TLHRLIAHW--SHQLTVPEQEV-------------RVWIEKIKS-----ENESENSCVDY 107
L LI+ W ++ + P++ R I+ + S + E + S
Sbjct: 331 VLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAE 390
Query: 108 LVKVAKFATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVR-VLNLIVNENGV 166
L +AK NR +A G + + + R++ E AV +LNL ++E+
Sbjct: 391 LRLLAKRNAN---NRICIAEAGAIPLLLSLLSSSDLRTQ----EHAVTALLNLSIHED-- 441
Query: 167 KEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSAL 226
N+ + + +P + +L+ G+++++ + L S+S+ +E K + + AL
Sbjct: 442 ----NKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYK-VTIGGMGAIPAL 496
Query: 227 FDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSI 286
L + DA + L L +Y+ K + + G+V ++ ++++ ++ ++++
Sbjct: 497 VVLLGEGSQRGKKDAA-AALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALM--DEAM 553
Query: 287 KMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMC 335
+LSI+++ EG+ A+ A +VE + RE+A V+ +C
Sbjct: 554 AILSILSSHPEGKAAIG-AAEPVPVLVEMIGSGTPRNRENAAAVMLHLC 601
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 185/391 (47%), Gaps = 51/391 (13%)
Query: 5 ELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHD-TCPATMQILSTKEF 63
+L I +P FRCPISL++M+ PV++CTG TYDR+SI+ W+ G++ TCP T LS
Sbjct: 9 DLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTL 68
Query: 64 VPNLTLHRLIAHWS--------HQLTVPEQE-----VRVWIEK---IKSENESENSCVDY 107
+PN TL RLI W ++ P+Q VR + + I + S S
Sbjct: 69 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAA 128
Query: 108 LVKVAKFATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNE---- 163
L ++ FA + NR +A++ E + +L + S V ES ++ L + E
Sbjct: 129 LRRLRGFARDSDKNRVLIAAHNA-TEILIKILFSETTSSELVSESLALLVMLPITEPNQF 187
Query: 164 ------NGVKEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNES---KR 214
G E L RL+ ++ ++++++ + +++ +S +S K
Sbjct: 188 VSISSDPGRVEFLTRLLFDS--------------SIETRVNAAALIEIVSTGTKSADLKG 233
Query: 215 RVLETENLLSALFDYLK--LAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRIL 272
+ +E++ + D L+ ++ +AL I ++ SV +S + + G +IL L
Sbjct: 234 SISNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSV-KSTRHIAITAGAPEILIDRL 292
Query: 273 SDSRTQILTVEKSIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIW 332
+ + T E+++ + ++ EG A E A +V+ +++V A E A +
Sbjct: 293 AADFDRCDT-ERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALL 351
Query: 333 SMCCVYKDARVKEAVVNSNGLTKLLLVMQSE 363
++C + R +E + + +LLL++QSE
Sbjct: 352 ALCTA--EERWREEAAGAGVVVQLLLMVQSE 380
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 195/403 (48%), Gaps = 48/403 (11%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
+ +P F CPISL++MK P + TG TY+RS IQ W++ G+ +CP T Q L PN
Sbjct: 241 LTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNY 300
Query: 68 TLHRLIAHW--SHQLTVPE---------------------QEVRVWIEKIKSEN-ESENS 103
L LI+ W H + P +R + K+ S++ E +
Sbjct: 301 VLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRRT 360
Query: 104 CVDYLVKVAKFATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVR-VLNLIVN 162
V + ++K +T + R L + G + + +L +E E+AV +LNL +
Sbjct: 361 AVSEIRSLSKRST----DNRILIAEAGAIPVLVKLLTSDGDTETQ--ENAVTCILNLSIY 414
Query: 163 ENGVKEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENL 222
E+ N+ ++ + + +LR G+++++ + L S+SL +E+K ++
Sbjct: 415 EH------NKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENK-IIIGASGA 467
Query: 223 LSALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTV 282
+ AL D L+ + DA + L L +Y+ K + V G+V+ L ++L+DS ++ +
Sbjct: 468 IMALVDLLQYGSVRGKKDAA-TALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERM-A 525
Query: 283 EKSIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDAR 342
++++ +LS++A+ + A+ A+ +++ + K RE+A ++ +C R
Sbjct: 526 DEALTILSVLASNQVAKTAIL-RANAIPPLIDCLQKDQPRNRENAAAILLCLC-----KR 579
Query: 343 VKEAVVNSNGLTKLLLVMQSENEGIVR--KMCGDLVKVLGKAS 383
E +++ L ++ +M+ +G R + L+++L K+S
Sbjct: 580 DTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLRKSS 622
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 135/275 (49%), Gaps = 35/275 (12%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P+ F CPI+L++M PV + TG TY++ SIQ W ++GH TCP T Q L PN L
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFAL 349
Query: 70 HRLIAHW--SHQLTVPEQEVRVWIEKIKSENESENSCVDYLVKVAKFATGCEANR----- 122
LI W + +PE+EV S+NE ++ V LV+ + E R
Sbjct: 350 KNLIMQWCEKNNFKIPEKEVSP-----DSQNEQKDE-VSLLVEALSSSQLEEQRRSVKQM 403
Query: 123 ----------RFLASYGGFVEAVFGVLNRKRRSEIAVLESAV-RVLNLIVNENGVKEKLN 171
R L + G + + +L+ + + E+AV +LNL ++E +N
Sbjct: 404 RLLARENPENRVLIANAGAIPLLVQLLS---YPDSGIQENAVTTLLNLSIDE------VN 454
Query: 172 RLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLK 231
+ +++ +P +EIL GN +++ S L S+S+ +E+K + N + L D L+
Sbjct: 455 KKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENK-VTIGLSNGIPPLVDLLQ 513
Query: 232 LAEDQALNDAILSILITLSVYRSVKAQLVELGMVQ 266
+ DA L+ L LS+ + K + ++ G+VQ
Sbjct: 514 HGTLRGKKDA-LTALFNLSLNSANKGRAIDAGIVQ 547
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 171/403 (42%), Gaps = 34/403 (8%)
Query: 1 MVRQEL---YIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQI 57
V QE+ +I VP F CPISLD+M PV + TG TYDR+SI W+E GH TCP T Q+
Sbjct: 293 FVAQEIGDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQM 352
Query: 58 LSTKEFVPNLTLHRLIAHW--------SHQLTVPEQEVRVWIEKIKSENESENSCVDYLV 109
L VPN L LI W + T E K+ E+ + V L+
Sbjct: 353 LMDSRIVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILI 412
Query: 110 KVAKFATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVL---NLIVNENGV 166
K A G +A + A + A G NR +E + R+L N I EN V
Sbjct: 413 KY--LADGSQAAQTVAAREIRLL-AKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENSV 469
Query: 167 KEKLN--------RLILNTYNCLPLFLEILREG-NLDSKIGSIKILDSISLDNESKRRVL 217
LN I+ +CL + +L G ++++ + L S+S +E K+R+
Sbjct: 470 TAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIA 529
Query: 218 ETENLLSALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRT 277
+ + AL L+ + DA+ + L LS + ++++E G V L L +
Sbjct: 530 IVDQCVEALALLLQNGTPRGKKDAV-TALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGV 588
Query: 278 QILTVEKSIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKT-AREDAVVVIWSMCC 336
++ S G A+ +E S ++ +M+ G +E+AV + + C
Sbjct: 589 AEEAAGALALLVR----QSLGAEAIGKEDSAVAGLMG-MMRCGTPRGKENAVAALLEL-C 642
Query: 337 VYKDARVKEAVVNSNGLTKLLLVMQSENEGIVRKMCGDLVKVL 379
A V E V+ + + LL + R+ L +V
Sbjct: 643 RSGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARVF 685
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 163/350 (46%), Gaps = 40/350 (11%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P FRCPISL++M PV + +G TY+R I+ WLE GH TCP T + L++ PN L
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLR 316
Query: 71 RLIAHW--SHQLTVPEQE-----VRVWIEKIKSENESENSCVDYLVKVAK---------- 113
LIA W S+ + P++ + ++ N + L+K+
Sbjct: 317 SLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRRSAA 376
Query: 114 -----FATGCEANRRFLASYGG--FVEAVFGVLNRKRRSEIAVLESAVRVLNL-IVNENG 165
A NR +A+ G + + + N R E AV +LNL I EN
Sbjct: 377 GEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAV----TSILNLSICQENK 432
Query: 166 VKEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSA 225
K I+ + +P + +L++G+++++ + L S+S+ +E+K + +
Sbjct: 433 GK------IVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENK-VTIGAAGAIPP 485
Query: 226 LFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKS 285
L L + DA + L L +++ K + V G+V +L R+L++ + + V++S
Sbjct: 486 LVTLLSEGSQRGKKDAA-TALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGM--VDES 542
Query: 286 IKMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMC 335
+ +L+I+++ +G+ + A +V+ + +E++ V+ +C
Sbjct: 543 LSILAILSSHPDGKSEVG-AADAVPVLVDFIRSGSPRNKENSAAVLVHLC 591
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 182/387 (47%), Gaps = 16/387 (4%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESG-HDTCPATMQILSTKEFVPN 66
I +P F CPISL++MK PV + TG+TYDR SI+ WL +G ++CP T Q ++ + PN
Sbjct: 10 IEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPN 69
Query: 67 LTLHRLIAHWS--------HQLTVPEQEV-RVWIEK-IKSENESENSCVDYLVKVAKFAT 116
TL RLI W ++ P + + IEK I+ S + V L ++ + +
Sbjct: 70 HTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQIVS 129
Query: 117 GCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLNRLILN 176
N+R L + G E + +++ + ++ + A+ +L + V + L
Sbjct: 130 ENATNKRCLEA-AGVPEFLANIVSNDSENG-SLTDEALNLLYHLETSETVLKNLL-NNKK 186
Query: 177 TYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQ 236
N + +I++ G +S++ + +L +I + + + + + + L Q
Sbjct: 187 DNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRISQ 246
Query: 237 ALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSR--TQILTVEKSIKMLSIVAT 294
A + IL+ + + + + VE G++ ++ +L D ++ E ++ +L ++
Sbjct: 247 KATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQ 306
Query: 295 CSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVVNSNGLT 354
C+EGR + V +++++V +TA + AV V+ S+ + ++ +
Sbjct: 307 CAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEMLQLGVVA 366
Query: 355 KLLLVMQSENEGIVRKMCGDLVKVLGK 381
KL LV+Q G ++ +L+K+ +
Sbjct: 367 KLCLVLQVSCGGKTKEKAKELLKLHAR 393
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 152/352 (43%), Gaps = 51/352 (14%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P FRCPI+L++M+ PV + TG TYDR SI W++SGH+TCP T Q+L VPN L
Sbjct: 274 IPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRAL 333
Query: 70 HRLIAHWSHQLTVP---------------------EQEVRVWIEKIKSENESENSCVDYL 108
LI W +P + V IEK+ + N V L
Sbjct: 334 KNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVAD--SNGVVFEL 391
Query: 109 VKVAKFATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLE--SAVRVLNL-IVNENG 165
+AK T R +A G + V R +E L+ + +LNL I+ +N
Sbjct: 392 RALAKSDT---VARACIAEAGAIPKLV-----RYLATECPSLQINAVTTILNLSILEQNK 443
Query: 166 VKEKLNRLILNTYNCLPLFLEILREG-NLDSKIGSIKILDSISLDNESKRRVLETENLLS 224
+ I+ T L +E+LR G ++K + L S++ + +RR+ ++S
Sbjct: 444 TR------IMETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVS 497
Query: 225 ALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEK 284
L D K + DA+++IL L R + VE G ++ + + +
Sbjct: 498 GLVDLAKQGPTSSKRDALVAIL-NLVAERENVGRFVEAG-------VMGAAGDAFQELPE 549
Query: 285 SIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVG-KTAREDAVVVIWSMC 335
+ G +A+S S R++ VM+ G T RE A + +MC
Sbjct: 550 EAVAVVEAVVRRGGLMAVSAAFSLI-RLLGEVMREGADTTRESAAATLVTMC 600
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 176/395 (44%), Gaps = 43/395 (10%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESG-HDTCPATMQILSTKEFVPN 66
I +P+ F CPISLD+MK PV + TG+TYDR SI+ WL SG ++CP T Q+++ + PN
Sbjct: 5 IEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPN 64
Query: 67 LTLHRLIAHWS--------HQLTVPEQEV-RVWIEK-IKSENESENSCVDYLVKVAKFAT 116
TL RLI W ++ P+ + + IEK IK + S + V L ++ + +
Sbjct: 65 HTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIVS 124
Query: 117 GCEANRRFL--ASYGGFVEAVFG-------------------------VLNRKRRSEIAV 149
N+R L A F+ + +L + S ++
Sbjct: 125 ENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSSRSL 184
Query: 150 LESAVRVL-NLIVNENGVKEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISL 208
++ A+ VL +L +E +K LN N + +I++ G +S+ + +L +
Sbjct: 185 MDEALSVLYHLDTSETALKSLLNN--KKGTNLVKTLTKIMQRGIYESRAYAALLLKKLLE 242
Query: 209 DNESKRRVLETENLLSALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQIL 268
+ + +L L + L + + IL+ + + + VE G + ++
Sbjct: 243 VADPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAVEGGTISMI 302
Query: 269 TRILSDS--RTQILTVEKSIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTARED 326
+L D ++ E ++ +L ++ C+EGR + V +++++V + E
Sbjct: 303 IELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSER 362
Query: 327 AVVVIWSMCCVYKDARVKEAVVNSNGLTKLLLVMQ 361
AV V+ S+ + + ++ + KL LV+Q
Sbjct: 363 AVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQ 397
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 168/361 (46%), Gaps = 57/361 (15%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
++ P FRCP+S ++M+ PV L +G TYD+ IQ WL SG+ TCP T Q+L PNL
Sbjct: 72 VSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNL 131
Query: 68 TLHRLIAHWS-----------HQLTVPEQEVRVWIEKIKSENESENSCVDYLVKVA---- 112
+ +I+ W H V E E +S+ E NS L KV+
Sbjct: 132 LIREMISKWCKKNGLETKSQYHPNLVNEDETVT-----RSDREIFNS---LLCKVSSSNL 183
Query: 113 KFATGCEANRRFLASYGGFVEAVFG------------VLNRKRRSEIAVLESAVRVLNLI 160
+ R L G A+FG +L+ E + +LN+
Sbjct: 184 QDQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNIS 243
Query: 161 VNENGVKEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSIS-LDNESKRRVLET 219
++++ K +L+ N +PL ++ LR G + ++ + + ++S LD S + ++
Sbjct: 244 IHDDSNK----KLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALD--SNKVLIGK 297
Query: 220 ENLLSALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQI 279
+L L D L+ A+ D + + + TL + +++ V G V++L + +S+
Sbjct: 298 SGILKPLIDLLEEGNPLAIKD-VAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNG---- 352
Query: 280 LTVEKSIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTA-----REDAVVVIWSM 334
L V++ + +L+++ T + A+ E G V ++K+ + + +E+A+V++ ++
Sbjct: 353 LYVDELLAILAMLVTHWK---AVEELGELGG--VSWLLKITRESECKRNKENAIVILHTI 407
Query: 335 C 335
C
Sbjct: 408 C 408
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 149/310 (48%), Gaps = 34/310 (10%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILS-TKEFVPNLT 68
+PN FRCPISL++M PV L +G T+DR SIQ W++SG+ TCP T LS T +PN
Sbjct: 5 LPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHA 64
Query: 69 LHRLIAHWSH-----------QLTVPEQEVRVWIEKIKSENESENSCVDYLVKVAKFATG 117
L LI +++H Q + + I + S++ S S ++ L ++ +
Sbjct: 65 LRSLILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLTKR 124
Query: 118 CEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLN---LIVNENGVKEKLNRLI 174
+ RR + G R+ + ++S +VL L + N E N++
Sbjct: 125 DSSIRRKVTESGAV------------RAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKVG 172
Query: 175 LNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAE 234
L + + +LR G+ D K + +L S+++ +K + + +SAL L++
Sbjct: 173 LVADGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGN 232
Query: 235 DQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVAT 294
D+ ++ + L L + + ++V+ G V IL +DS +E+++++L ++
Sbjct: 233 DRERKESA-TALYALCSFPDNRKRVVDCGSVPILVEA-ADS-----GLERAVEVLGLLVK 285
Query: 295 CSEGRLALSE 304
C GR +S+
Sbjct: 286 CRGGREEMSK 295
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 116/271 (42%), Gaps = 34/271 (12%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
+VP F CPISLD+M+ PV TG TYDR SI W+E GH TCP + Q L+ VPN
Sbjct: 295 FSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNR 354
Query: 68 TLHRLIAHWSH----QLTVPEQEVRVWIEKIKSENESENSCVDYLVKVAKFATGCEANRR 123
L LI+ W Q PE NE CV A C ++R
Sbjct: 355 ALRSLISQWCGVYGLQYDSPE------------SNEGMAECV---------AASC-SSRA 392
Query: 124 FLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLNRLILNTYNCLPL 183
+ + + +L + AV +R+L K NR + +PL
Sbjct: 393 AMEANKATARILVRMLEDGSENVKAVAAKEIRLL-------AKTGKQNRAFIADLGAIPL 445
Query: 184 FLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDAIL 243
+L + ++ ++ L ++S+ +K R++E E L + L+ +
Sbjct: 446 LCRLLLSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAA 505
Query: 244 SILITLSVYRSVKAQLV-ELGMVQILTRILS 273
+ L +LSV + K ++ E G V+ L +L+
Sbjct: 506 ATLFSLSVVHNFKKLIMNEPGAVEELASMLT 536
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 181/387 (46%), Gaps = 49/387 (12%)
Query: 5 ELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFV 64
E I +P F+CPIS+D+MK PV + TG+TYDR SI+ W+ SG+ TCP T +L+T + +
Sbjct: 26 ESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQI 85
Query: 65 PNLTLHRLIAHWSHQLTVPEQEVRVWIEKIKSENESENSCVDYLVKVAKFATGCEANRRF 124
PN T+ ++I W + P I++I + C Y + K ++ A RR
Sbjct: 86 PNHTIRKMIQGWCVEKGSP------LIQRIPTPRVPLMPCEVYEIS-RKLSS---ATRR- 134
Query: 125 LASY---GGFVEAVFGVLNRKRRSEIAVLESAVR-VLNLIVNENGVKEKLNRLILNTYNC 180
Y G +E + + + ++ V E++V VL ++ EKL ++ +
Sbjct: 135 -GDYEKCGVIIEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEILSL 193
Query: 181 L----PLFLEILRE-----------GNLDSKIGSIK-----ILDSISLDNESKRRVLETE 220
L P+ LE + + G L S S++ I+ I +E++ E
Sbjct: 194 LTWMFPIGLEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVE 253
Query: 221 NLLSALFDYLKLAEDQALNDAILSILITLSVYR------SVKAQLVELGMVQILTRILSD 274
N ++ +KL D + + S LI ++Y+ + ++ +E+G+V I ++ D
Sbjct: 254 NGVAEAL--VKLIRDSVSSSSTKSSLI--AIYQMVLQKPEIASEFLEIGLVSITVEMIVD 309
Query: 275 SRTQILTVEKSIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSM 334
+ + EK++ +L + GR + + A +V+++ KV + A ++ +I +
Sbjct: 310 AENSV--CEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKL 367
Query: 335 CCVYKDARVKEAVVNSNGLTKLLLVMQ 361
V++A V K+LLV+Q
Sbjct: 368 WKTGNTVAVEDA-VRLGAFQKVLLVLQ 393
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana
GN=PUB26 PE=2 SV=1
Length = 421
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 47/72 (65%)
Query: 5 ELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFV 64
+L I +P FRCPISLD+M PV++ TG TYDR+SI W+ G+ TCP T LS +
Sbjct: 9 DLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLI 68
Query: 65 PNLTLHRLIAHW 76
PN TL RLI W
Sbjct: 69 PNHTLRRLIQEW 80
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 49/69 (71%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
I++P FRCP+S ++M PV + +G T+DR+SI+ WL++G CP T Q+L+ +E +PN
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNY 295
Query: 68 TLHRLIAHW 76
T+ +IA W
Sbjct: 296 TVKAMIASW 304
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 156 VLNLIVNENGVKEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRR 215
+LNL ++E LN+ ++ + + +L GN +K S L S+S+ ++ R
Sbjct: 538 LLNLSISE------LNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRER 591
Query: 216 VLETENLLSALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDS 275
+ ++ + AL + L + DA S L LS+ KA++V+ V+ L +L
Sbjct: 592 IGQSNAAIQALVNLLGKGTFRGKKDAA-SALFNLSITHDNKARIVQAKAVKYLVELLD-- 648
Query: 276 RTQILTVEKSIKMLSIVATCSEGRLALSEEASCAGRVVERVMKVGKTAREDAVVVIWSMC 335
+ V+K++ +L+ ++ EGR A+ E +VE V + +E+A V+ +C
Sbjct: 649 -PDLEMVDKAVALLANLSAVGEGRQAIVREGGIP-LLVETVDLGSQRGKENAASVLLQLC 706
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 191/450 (42%), Gaps = 79/450 (17%)
Query: 1 MVRQELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILS- 59
M ++E I +PN F CPISL++MK PV+ +G+TYDR +I WLE +CP T Q L
Sbjct: 1 MDQEEEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKV-PSCPVTKQPLPL 59
Query: 60 TKEFVPNLTLHRLIAHWSHQ-----------LTVPEQEVRVWIEKIKSENESENSCV--- 105
+ PN L RLI HW + VP ++ V +E+IK+ + +
Sbjct: 60 DSDLTPNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNV-VEEIKNLKKFGQEALGRE 118
Query: 106 DYLVKVAKFATGCEANRRFLASYGGFVEAVFGVL-----NRKRRSEIAVLESAVRVLNLI 160
+ L K+ A NRR + G + V+ + R I L+ ++R+L+LI
Sbjct: 119 ETLQKLEVLAMDGN-NRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLI 177
Query: 161 -VNENGVKEKL----------------NRLILNTYNCLPL----------FLEILREGNL 193
+ N K L + Y + L +E L
Sbjct: 178 GIPSNDAKTILMENDRVMESLTWVLHQEDFLSKAYTIVLLRNLTEYTSSHIVERLNPEIF 237
Query: 194 DSKIGSIK-ILDSISLDNESKRRVLETENLLS------ALFDYLKLAEDQALNDAILSIL 246
IG +K +++S++ + + R +++ + S + D+ L QA+ A++ +L
Sbjct: 238 KGIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDH-SLVIKQAVTAALMILL 296
Query: 247 ITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGRLALSEEA 306
T S R+ ++ LV+LG V L + + E + +LS + C+ GR +
Sbjct: 297 ETSSWSRN-RSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHR 355
Query: 307 SCAGRVVERVMKVGKTAREDAVVVIWSMCCVYKDARVKEAVVNSNGLTKLLLVMQSENEG 366
V +R+++V A + A+ ++ ++ + V E +VN G
Sbjct: 356 GGIAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNV---------------G 400
Query: 367 IVRKMCGDLVKVLGKASGLGNYQTKTAHIM 396
V K+C VLG GL N + K I+
Sbjct: 401 TVEKLCS----VLGMDCGL-NLKEKAKEIL 425
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 163/353 (46%), Gaps = 40/353 (11%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHD-TCPATMQILSTKEFVPN 66
+ VP F C +S +M P+ + +G T+++S I WL+ H+ TCP T Q+L + +PN
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLK--HERTCPRTKQVLYHRFMIPN 120
Query: 67 LTLHRLIAHWS--HQLTVPEQ----------EVRVWIEKIKSENESEN---SCVDYLVKV 111
++ +I W H P+ ++ +++I S + E+ + + +K
Sbjct: 121 HLINEVIKEWCLIHNFDRPKTSDEVIDLFTGDLESLLQRISSPSSVEDQTEAAKELALKA 180
Query: 112 AKFATGCEANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLN 171
+F++ C F+A + + L+ S LE+ V L++ EK
Sbjct: 181 KRFSSVC---VYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIF----STSEKNK 233
Query: 172 RLILNTYNCLPLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYLK 231
L+ LPL + +++G + ++I S ++S+S +S + ++ +L AL ++
Sbjct: 234 TLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSY-TDSNKIIIGNSEVLKALIHVIE 292
Query: 232 LAEDQALNDAILSILITLSVYRSVKAQLVELGMVQ-ILTRILSDSRTQILTVEKSIKMLS 290
+ A ++A S L L + + + V G+++ + +I + S +L LS
Sbjct: 293 EGDSLATSEA-FSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVSML--------LS 343
Query: 291 IVATCSEGRLALSEEASCAGRVVE--RVMKVGKT--AREDAVVVIWSMCCVYK 339
++A S +EE G + + +++ + E+AVV+++++C YK
Sbjct: 344 LLAFVSTQNHQTTEEMDNLGLIYDLFSILRNSNSLVNDENAVVIVYNICKSYK 396
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P RCPISL +M PV + +G TY+R I+ W GH++CP T Q L PN +
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 71 RLIAHWSHQ--LTVP 83
LIA W Q +TVP
Sbjct: 336 GLIASWCEQNGITVP 350
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 40/76 (52%)
Query: 3 RQELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKE 62
R + + P F CPISL+VMK P G TY+ +I WL+ GH+T P T L +
Sbjct: 318 RSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTK 377
Query: 63 FVPNLTLHRLIAHWSH 78
VPNL L I W H
Sbjct: 378 LVPNLALRSAIQEWLH 393
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P RCPISL +M PV + +G TY+R I+ W GH+TCP T Q L PN +
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 71 RLIAHWSHQLTV------PE-QEVRVW----IEKIKSENESENSCVDYLVKVAKFATGCE 119
LIA W Q PE Q++ W + ++++S NS Y +K K E
Sbjct: 333 GLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYKLKGVKIVP-LE 391
Query: 120 ANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLNRLILNTYN 179
N + E+ + + S+I VLE +L ++ E G+++K
Sbjct: 392 ENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKK---------- 441
Query: 180 CLPLFLEILREGNLDSKIGSIKILDSISL---DNESKRRVLETENLLSALFDYLKLAEDQ 236
K+++ I L D+E R + + AL +L A D
Sbjct: 442 --------------------CKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDD 481
Query: 237 ---ALNDAILSILITLSVYRSVKAQLV-ELGMVQILTRILSDSRTQ 278
A D+ L L+V + +L+ G++++L +++S + +
Sbjct: 482 NNAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAESH 527
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 169/413 (40%), Gaps = 62/413 (15%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVP--NLT 68
P F CPI+ + PV+L TG TY+R +IQ WL +G+ TCP T Q LS +P N
Sbjct: 514 PKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQALSAN-ILPKTNYV 572
Query: 69 LHRLIAHWSHQLTVPEQEVRVWIEKIKSENESENSCVDYLVKVAKFATGCEANRRFLASY 128
L RLI W Q QE S +SC AK T + +R S
Sbjct: 573 LKRLIVSWKEQNPELAQEFS------NSNTPRGSSC----SPSAKDITMVSSIQRTTDSP 622
Query: 129 GGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNE---NGVKEKLNRLIL--NTYNCLPL 183
+ + R + ++V S VL+ E N + + L N +C
Sbjct: 623 SQKYKDDYIRQRNNRFTRVSVGASPTSVLSQAAVETIINSLTPYITSLCTSENLQDCEQA 682
Query: 184 FLEILR---EGNLDSKI-----------GSIKILDSISLDNE--------------SKRR 215
LEI R + D +I G ++IL S SL+ E S R
Sbjct: 683 VLEIARLWKDSKTDPQIHSYLSKPTVVSGLVEIL-SASLNREVLRRSIYILSELIFSDER 741
Query: 216 VLETENLLSALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDS 275
V ET N + + FD L + L +A L I R V AQL E ++ L +++ +
Sbjct: 742 VGETLNSVDSDFDCLAMLLKNGLAEAALLIY----QLRPVFAQLSEHELIPSLIQVIQNK 797
Query: 276 RTQI----LTVEKSIKMLSIVATC----SEGRLALSEEASCAGRVVERVMK-VGKTARED 326
I L ++ ++I+ E +++ + + + ++K + KT
Sbjct: 798 SEDIDDFQLAIDPKAAAIAILEQILIGGDEYNRSVNASSVISANGIPAIVKYLDKTEGRR 857
Query: 327 AVVVIWSMCCVYKDARVKEAVVNSNGLTKLLLVMQSENEGIVRKMCGDLVKVL 379
V+ I +CC+ + K ++ N L+ +L + + N+ VR +C + + L
Sbjct: 858 PVISIL-LCCMQAEKSCKSSIANRIELSPVLELFHAGNDS-VRGICVEFLSEL 908
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P RCPISL +M PV + +G TY+R I+ W GH+TCP T Q LS PN +
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 71 RLIAHWSHQ--LTVPE 84
LI+ W Q + VP+
Sbjct: 340 ALISSWCEQNGVQVPD 355
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%)
Query: 14 FRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLHRLI 73
RCPISL++M PV L +G TYDRSSI W SG+ TCP T + L + V N ++ ++I
Sbjct: 282 LRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVI 341
Query: 74 AHWSHQ 79
+S Q
Sbjct: 342 QSYSKQ 347
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 16 CPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLHRLI 73
CPISL++M PV + TG TYDRSSI W SG+ TCP T +IL++ E V N+++ ++I
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVI 351
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 4 QELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEF 63
Q +A+ F CP+SL+VM PV + +G TY+++ I+ W++ G CP T Q L+
Sbjct: 224 QTSSVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTL 283
Query: 64 VPNLTLHRLIAHW 76
+PN T+ LIA+W
Sbjct: 284 IPNYTVKALIANW 296
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 145 SEIAVLESAVR-VLNLIVNENGVKEKLNRLILNTYNCLPLFLEILREGNLDSKIGSIKIL 203
++ A E+AV +LNL +N+N N+ + + + +L G+ ++K S L
Sbjct: 595 TDSATQENAVTALLNLSINDN------NKKAIADAGAIEPLIHVLENGSSEAKENSAATL 648
Query: 204 DSISLDNESKRRVLETENLLSALFDYLKLAEDQALNDAILSILITLSVYRSVKAQLVELG 263
S+S+ E+K ++ ++ + L D L + DA + L LS+++ KA +V+ G
Sbjct: 649 FSLSVIEENKIKIGQS-GAIGPLVDLLGNGTPRGKKDAA-TALFNLSIHQENKAMIVQSG 706
Query: 264 MVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGRLALSEEA 306
V+ L ++ + V+K++ +L+ +AT EGR A+ +E
Sbjct: 707 AVRYLIDLMDPAAGM---VDKAVAVLANLATIPEGRNAIGQEG 746
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 166/359 (46%), Gaps = 38/359 (10%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHD-TCPATMQILSTKEFVPN 66
+ VP F C +S +M PV + +G TY++ I WL+ H+ TCP T Q+LS + ++PN
Sbjct: 70 VEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLK--HERTCPKTKQVLSHRLWIPN 127
Query: 67 LTLHRLIAHW------SHQLTVPEQEVRVWIEKIKS--ENESENSCVDYLVKVAKFATGC 118
+ LI W HQ E ++ I++ + S +S V ++ AK
Sbjct: 128 HLISDLITQWCLVNKYDHQKPSDELVAELFTSDIEALLQRVSSSSSVADQIEAAKELR-- 185
Query: 119 EANRRFLASYGGFVEAVFGVLNRKRRSEIAVLESAVRVLNLIVNENGVKEKLNRLILNTY 178
++F FV + + R S ++ L+ AV +L + EN V N IL +
Sbjct: 186 HQTKKFPNVRVFFVAGIHDSITR-LLSPLSTLDEAVDS-SLELQENIVTALFNLSILESN 243
Query: 179 ------NCL--PLFLEILREGNLDSKIGSIKILDSISLDNESKRRVLETENLLSALFDYL 230
NCL PL + L++G +++ + L S+S +S + ++ + AL D +
Sbjct: 244 KTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSA-IDSNKIIIGNSEAVKALIDLI 302
Query: 231 KLAEDQALNDAILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLS 290
+ + A +A S + L + K ++V G++ T+ + V++ + +L+
Sbjct: 303 EEGDLLATKEAT-STVFNLCIVLENKGKVVSAGLIHAATKKIKAGS----NVDELLSLLA 357
Query: 291 IVATCSEGRLALSEEASCAGRVVERVMKVGKTAR----EDAVVVIWSMCCVYKD-ARVK 344
+++T + EE G + + + K + E+AVV++++M +D +R+K
Sbjct: 358 LISTHNRA----VEEMDKLGFIYDLFSILRKPSSLLTGENAVVIVFNMYDRNRDRSRLK 412
>sp|Q9FGD7|PUB50_ARATH Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana
GN=PUB50 PE=3 SV=1
Length = 765
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P++F CPI +VMK+P G +Y+ +IQ WL GHDT P T L + PN TL
Sbjct: 689 IPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHTL 748
Query: 70 HRLIAHW 76
LI W
Sbjct: 749 RSLIQDW 755
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVP--NLT 68
P F CPI+ + PV+L TG TY+R +IQ WL +G+ TCP T Q LS +P N
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSAS-ILPKTNYV 570
Query: 69 LHRLIAHWSHQ 79
L RLI W Q
Sbjct: 571 LKRLITSWKEQ 581
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVP--NLT 68
P F CPI+ + PV+L TG TY+R +IQ WL +G+ TCP T Q LS +P N
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSAS-ILPKTNYV 570
Query: 69 LHRLIAHWSHQ 79
L RLI W Q
Sbjct: 571 LKRLITSWKEQ 581
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P+ F CPIS +VM+ P G TY+ S++ WL++GH+T P T L+ VPN L
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 71 RLIAHW 76
I W
Sbjct: 558 SAIQEW 563
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 8 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNL 67
+ VP+ FRC +SL++M PV + +G T++R IQ W++ G CP T Q LS PN
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNF 297
Query: 68 TLHRLIAHW 76
+ +A W
Sbjct: 298 IVRAFLASW 306
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 34/276 (12%)
Query: 75 HWSHQLTVP------------EQEVRVWIEKIKSENESENSCVDYLVKVAKFATGCEANR 122
HW H +P E EV+ I+ +KS S ++ + ++ A NR
Sbjct: 399 HWRHPGIIPATVRETGSSSSIETEVKKLIDDLKSS--SLDTQREATARIRILARNSTDNR 456
Query: 123 RFLASYGGFVEAVFGVLNRKRRSEIAVLESAVR-VLNLIVNENGVKEKLNRLILNTYNCL 181
+A EA+ +++ ++ + AV +LNL +N+N LI + +
Sbjct: 457 IVIAR----CEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNN-----KSLIAESGAIV 507
Query: 182 PLFLEILREGNLD-SKIGSIKILDSISLDNESKRRVLETENLLSALFDYLKLAEDQALND 240
PL + +L+ G L+ +K S L S+S+ E K + E + L D L D
Sbjct: 508 PL-IHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEA-GAIEPLVDLLGSGSLSGKKD 565
Query: 241 AILSILITLSVYRSVKAQLVELGMVQILTRILSDSRTQILTVEKSIKMLSIVATCSEGRL 300
A + L LS++ K +++E G V+ L ++ + VEK++ +L+ +AT EG++
Sbjct: 566 AA-TALFNLSIHHENKTKVIEAGAVRYLVELMDPA---FGMVEKAVVVLANLATVREGKI 621
Query: 301 ALSEEASCAGRVVERVMKVGKT-AREDAVVVIWSMC 335
A+ EE V+ V+++G +E+A + +C
Sbjct: 622 AIGEEGGIP--VLVEVVELGSARGKENATAALLQLC 655
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P F CPI+ D+M+ P G TY+ +I W E GH+T P + L VPNL L
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 71 RLIAHW 76
I W
Sbjct: 414 SAIQEW 419
>sp|Q94A51|PUB32_ARATH U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32
PE=2 SV=1
Length = 805
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P+ + CPI +VMK P+ G TY+ +I+ WL +GHDT P T + +PN LH
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 71 RLIAHWSHQ 79
I W +Q
Sbjct: 796 LAIQDWQNQ 804
>sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35
PE=1 SV=2
Length = 835
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P F CP+ DVM P G TYDR +I+ WL+ H+T P T L +K +PN TL+
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKE-HNTSPMTDSPLHSKNLLPNYTLY 825
Query: 71 RLIAHW 76
I W
Sbjct: 826 TAIMEW 831
>sp|Q9LU47|PUB53_ARATH Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana
GN=PUB53 PE=3 SV=1
Length = 819
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P+ F CP+ DVMK P G TYDR +I+ W+E H T P T L +PN TL+
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWME-NHRTSPVTNSPLQNVNLLPNHTLY 808
Query: 71 RLIAHW 76
I W
Sbjct: 809 AAIVEW 814
>sp|Q9SGT1|PUB57_ARATH U-box domain-containing protein 57 OS=Arabidopsis thaliana GN=PUB57
PE=2 SV=2
Length = 391
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 34/63 (53%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P F CPI+ DVMK+P G TY+ +IQ W+ +GH T P T LS F PN L
Sbjct: 324 PPSFICPITQDVMKNPHMAADGFTYELEAIQKWINTGHRTSPMTNLKLSHFSFFPNRALR 383
Query: 71 RLI 73
I
Sbjct: 384 SAI 386
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 14 FRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLHRLI 73
F+CPIS+++M+ P G TY+ + WL SG T P T + L VPN TL +I
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRIII 296
Query: 74 AHW 76
W
Sbjct: 297 KDW 299
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 10 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTL 69
+P F+C +S VM PV + +G T++R IQ W + G+D+CP + + L PN+ L
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVEL 278
Query: 70 HRLIAHWSHQLTVPEQEVRVWIEKIKSENESENSCVDYLVKVAKFATG 117
I+ W + + Q+ + +K+ N +D+ V +A F +
Sbjct: 279 KSQISEWCAKNGLDVQDPAR--KHVKASNS-----IDFSVSIASFGSS 319
>sp|Q9SGT2|PUB58_ARATH Putative U-box domain-containing protein 58 OS=Arabidopsis thaliana
GN=PUB58 PE=2 SV=3
Length = 420
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 34/63 (53%)
Query: 11 PNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKEFVPNLTLH 70
P+ F CPI+ +VMK P G TY+ SI+ WL +GH T P T LS VPN L
Sbjct: 354 PSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRALR 413
Query: 71 RLI 73
I
Sbjct: 414 SAI 416
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,161,431
Number of Sequences: 539616
Number of extensions: 4829392
Number of successful extensions: 14245
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 14075
Number of HSP's gapped (non-prelim): 153
length of query: 398
length of database: 191,569,459
effective HSP length: 120
effective length of query: 278
effective length of database: 126,815,539
effective search space: 35254719842
effective search space used: 35254719842
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)