Query 015942
Match_columns 398
No_of_seqs 358 out of 1859
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 02:20:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015942.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015942hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07224 Pat_like Patatin-like 100.0 6.5E-45 1.4E-49 346.0 21.2 231 155-385 1-233 (233)
2 cd07220 Pat_PNPLA2 Patatin-lik 100.0 2.1E-44 4.6E-49 345.2 22.3 227 152-386 3-249 (249)
3 cd07219 Pat_PNPLA1 Patatin-lik 100.0 6.9E-44 1.5E-48 355.4 23.0 233 148-388 7-259 (382)
4 cd07223 Pat_PNPLA5-mammals Pat 100.0 1.1E-43 2.4E-48 352.8 23.9 229 151-390 7-258 (405)
5 cd07221 Pat_PNPLA3 Patatin-lik 100.0 1.4E-43 2.9E-48 340.3 22.6 229 154-390 1-249 (252)
6 cd07204 Pat_PNPLA_like Patatin 100.0 2.3E-43 5E-48 337.3 21.9 221 155-385 1-243 (243)
7 cd07218 Pat_iPLA2 Calcium-inde 100.0 7.3E-43 1.6E-47 334.1 22.9 226 154-388 1-244 (245)
8 cd07230 Pat_TGL4-5_like Triacy 100.0 1.8E-41 3.8E-46 346.8 19.1 245 85-349 3-291 (421)
9 cd07232 Pat_PLPL Patain-like p 100.0 5.1E-41 1.1E-45 342.1 22.4 239 95-350 6-281 (407)
10 cd07222 Pat_PNPLA4 Patatin-lik 100.0 7.6E-41 1.7E-45 320.5 22.2 223 155-387 1-246 (246)
11 cd07229 Pat_TGL3_like Triacylg 100.0 4.6E-41 1E-45 338.3 20.3 278 82-379 5-366 (391)
12 cd07206 Pat_TGL3-4-5_SDP1 Tria 100.0 7.1E-41 1.5E-45 326.2 19.3 244 95-385 6-285 (298)
13 cd07231 Pat_SDP1-like Sugar-De 100.0 6.3E-40 1.4E-44 320.3 19.3 248 88-379 2-298 (323)
14 KOG2214 Predicted esterase of 100.0 1.1E-36 2.5E-41 307.4 11.0 253 68-329 90-382 (543)
15 cd07225 Pat_PNPLA6_PNPLA7 Pata 100.0 2.9E-34 6.3E-39 283.0 23.6 160 151-319 13-183 (306)
16 PRK10279 hypothetical protein; 100.0 1.8E-34 3.8E-39 283.5 20.2 157 151-319 3-167 (300)
17 cd07198 Patatin Patatin-like p 100.0 5.1E-32 1.1E-36 245.5 17.8 164 156-327 1-172 (172)
18 cd07228 Pat_NTE_like_bacteria 100.0 1.2E-31 2.6E-36 243.8 18.2 155 154-319 1-162 (175)
19 cd07227 Pat_Fungal_NTE1 Fungal 100.0 1.3E-31 2.9E-36 259.4 16.9 159 151-319 8-176 (269)
20 cd07205 Pat_PNPLA6_PNPLA7_NTE1 100.0 2.9E-31 6.4E-36 240.7 17.3 156 154-319 1-162 (175)
21 KOG3773 Adiponutrin and relate 100.0 6.1E-32 1.3E-36 261.5 13.0 230 151-390 4-254 (354)
22 cd07210 Pat_hypo_W_succinogene 100.0 5.1E-31 1.1E-35 248.8 17.2 155 154-319 1-162 (221)
23 cd07207 Pat_ExoU_VipD_like Exo 100.0 9.6E-31 2.1E-35 240.3 16.8 157 156-319 2-187 (194)
24 cd07209 Pat_hypo_Ecoli_Z1214_l 100.0 3.5E-30 7.5E-35 242.0 17.9 147 156-319 1-152 (215)
25 cd07208 Pat_hypo_Ecoli_yjju_li 100.0 2E-29 4.4E-34 243.4 18.0 158 156-319 1-168 (266)
26 COG1752 RssA Predicted esteras 100.0 1.6E-29 3.4E-34 249.3 17.4 160 150-319 8-185 (306)
27 KOG2968 Predicted esterase of 99.9 2.6E-27 5.6E-32 250.3 16.6 202 102-319 796-1007(1158)
28 cd07212 Pat_PNPLA9 Patatin-lik 99.9 7.8E-25 1.7E-29 216.7 15.1 156 156-319 2-183 (312)
29 cd07211 Pat_PNPLA8 Patatin-lik 99.9 2.5E-24 5.4E-29 212.4 17.1 165 151-319 6-205 (308)
30 cd07213 Pat17_PNPLA8_PNPLA9_li 99.9 1.9E-24 4.2E-29 211.5 14.3 157 155-319 4-182 (288)
31 cd07214 Pat17_isozyme_like Pat 99.9 6.7E-24 1.4E-28 213.1 15.5 161 154-319 5-212 (349)
32 cd07217 Pat17_PNPLA8_PNPLA9_li 99.9 9.2E-24 2E-28 211.4 15.5 163 154-319 2-205 (344)
33 cd07216 Pat17_PNPLA8_PNPLA9_li 99.9 1.9E-23 4.1E-28 206.3 14.8 161 155-319 3-206 (309)
34 cd07215 Pat17_PNPLA8_PNPLA9_li 99.9 5.7E-23 1.2E-27 204.7 14.4 160 155-319 2-202 (329)
35 cd01819 Patatin_and_cPLA2 Pata 99.9 7E-23 1.5E-27 183.2 13.1 133 156-319 1-142 (155)
36 COG4667 Predicted esterase of 99.9 3.8E-22 8.2E-27 189.0 16.9 164 149-319 7-180 (292)
37 cd07199 Pat17_PNPLA8_PNPLA9_li 99.9 1.9E-22 4.1E-27 194.1 13.6 131 156-319 2-149 (258)
38 PF01734 Patatin: Patatin-like 99.9 4.4E-23 9.6E-28 184.2 2.2 159 156-319 1-203 (204)
39 TIGR03607 patatin-related prot 99.7 3.1E-17 6.7E-22 176.9 14.1 165 153-321 3-292 (739)
40 COG3621 Patatin [General funct 99.7 8.7E-16 1.9E-20 149.2 13.1 162 155-318 11-207 (394)
41 KOG4231 Intracellular membrane 99.6 4E-15 8.8E-20 151.0 9.9 165 152-319 416-615 (763)
42 PF11815 DUF3336: Domain of un 98.6 1.7E-08 3.8E-13 89.6 2.1 77 68-149 63-144 (145)
43 cd00147 cPLA2_like Cytosolic p 98.4 9.7E-07 2.1E-11 91.3 8.2 55 150-204 40-96 (438)
44 KOG3773 Adiponutrin and relate 98.1 3.6E-08 7.8E-13 96.8 -7.6 287 67-395 56-345 (354)
45 cd07202 cPLA2_Grp-IVC Group IV 97.6 4.3E-05 9.4E-10 78.2 3.3 62 150-211 37-103 (430)
46 cd07201 cPLA2_Grp-IVB-IVD-IVE- 97.4 0.00031 6.7E-09 73.9 7.2 62 150-211 51-115 (541)
47 cd07200 cPLA2_Grp-IVA Group IV 96.7 0.00073 1.6E-08 71.1 2.2 53 150-202 42-95 (505)
48 PF01735 PLA2_B: Lysophospholi 96.7 0.002 4.3E-08 68.1 4.8 49 154-202 1-58 (491)
49 smart00022 PLAc Cytoplasmic ph 96.4 0.0019 4.1E-08 68.9 2.8 54 150-203 74-135 (549)
50 KOG1325 Lysophospholipase [Lip 96.3 0.0019 4.1E-08 68.4 1.8 54 150-203 46-107 (571)
51 cd07203 cPLA2_Fungal_PLB Funga 96.1 0.0035 7.7E-08 66.5 2.9 61 150-210 61-134 (552)
52 KOG0513 Ca2+-independent phosp 96.1 0.01 2.2E-07 62.8 6.2 160 151-319 292-478 (503)
53 smart00827 PKS_AT Acyl transfe 85.9 3 6.4E-05 40.5 7.8 55 164-220 65-119 (298)
54 KOG0513 Ca2+-independent phosp 85.7 1.3 2.9E-05 47.1 5.5 167 152-319 34-268 (503)
55 TIGR03131 malonate_mdcH malona 84.0 3.9 8.6E-05 39.8 7.7 54 163-218 58-111 (295)
56 PF00698 Acyl_transf_1: Acyl t 83.7 2.6 5.7E-05 41.6 6.4 55 164-220 67-121 (318)
57 TIGR00128 fabD malonyl CoA-acy 83.4 4.2 9.2E-05 39.1 7.6 56 163-220 64-120 (290)
58 COG3340 PepE Peptidase E [Amin 81.0 2.1 4.5E-05 40.6 4.1 87 103-198 34-132 (224)
59 PRK05282 (alpha)-aspartyl dipe 78.7 2 4.4E-05 41.1 3.4 45 153-199 80-128 (233)
60 PF03575 Peptidase_S51: Peptid 71.8 4.1 9E-05 36.0 3.4 40 153-197 36-82 (154)
61 cd03145 GAT1_cyanophycinase Ty 71.6 6.7 0.00014 36.9 4.9 44 152-200 83-133 (217)
62 PLN02752 [acyl-carrier protein 70.7 16 0.00035 36.6 7.7 56 164-219 101-160 (343)
63 TIGR02069 cyanophycinase cyano 70.4 8.2 0.00018 37.3 5.3 46 151-198 81-130 (250)
64 PF07812 TfuA: TfuA-like prote 64.2 7.7 0.00017 33.4 3.3 35 165-204 9-44 (120)
65 cd03129 GAT1_Peptidase_E_like 59.7 25 0.00055 32.5 6.2 47 152-200 80-130 (210)
66 COG0331 FabD (acyl-carrier-pro 57.2 35 0.00076 34.2 7.1 56 164-219 66-121 (310)
67 PF09752 DUF2048: Uncharacteri 53.7 16 0.00034 37.2 3.9 39 164-204 158-196 (348)
68 TIGR02813 omega_3_PfaA polyket 46.7 48 0.001 42.4 7.3 52 164-217 657-708 (2582)
69 cd03146 GAT1_Peptidase_E Type 42.6 26 0.00056 32.7 3.3 46 152-199 80-129 (212)
70 cd02252 nylC_like nylC-like fa 41.4 29 0.00062 33.9 3.5 29 152-180 57-86 (260)
71 TIGR02627 rhamnulo_kin rhamnul 39.1 1.2E+02 0.0026 31.5 8.1 90 115-212 356-447 (454)
72 PRK11126 2-succinyl-6-hydroxy- 37.4 37 0.00079 31.0 3.5 32 172-205 57-88 (242)
73 PF01764 Lipase_3: Lipase (cla 35.0 29 0.00063 29.2 2.3 18 185-202 66-83 (140)
74 PF03576 Peptidase_S58: Peptid 34.7 36 0.00079 34.3 3.2 26 155-180 69-94 (326)
75 PRK10640 rhaB rhamnulokinase; 34.4 1.5E+02 0.0032 31.2 7.8 89 116-212 345-435 (471)
76 PF07859 Abhydrolase_3: alpha/ 32.2 34 0.00073 30.8 2.3 24 179-202 67-90 (211)
77 PF05728 UPF0227: Uncharacteri 32.1 64 0.0014 29.7 4.2 32 171-203 48-79 (187)
78 PF03959 FSH1: Serine hydrolas 31.2 53 0.0011 30.4 3.5 30 170-202 92-121 (212)
79 cd00707 Pancreat_lipase_like P 30.8 66 0.0014 31.2 4.2 35 169-203 97-132 (275)
80 PRK10566 esterase; Provisional 30.4 55 0.0012 30.2 3.5 34 171-204 94-128 (249)
81 PF03283 PAE: Pectinacetyleste 29.2 48 0.001 33.8 3.1 32 170-201 142-174 (361)
82 PRK06765 homoserine O-acetyltr 28.4 64 0.0014 33.2 3.8 31 174-205 153-183 (389)
83 TIGR03056 bchO_mg_che_rel puta 28.3 65 0.0014 29.7 3.6 20 185-204 97-116 (278)
84 PRK07581 hypothetical protein; 27.7 68 0.0015 31.5 3.8 35 175-211 116-151 (339)
85 PRK08775 homoserine O-acetyltr 27.5 67 0.0014 31.8 3.7 36 168-204 123-159 (343)
86 PRK10673 acyl-CoA esterase; Pr 27.4 73 0.0016 29.2 3.8 18 186-203 84-101 (255)
87 PF12697 Abhydrolase_6: Alpha/ 27.3 81 0.0018 27.3 3.9 30 172-203 57-86 (228)
88 PLN02847 triacylglycerol lipas 26.7 43 0.00092 36.6 2.2 17 186-202 254-270 (633)
89 TIGR01840 esterase_phb esteras 26.5 72 0.0016 29.1 3.5 36 170-205 81-117 (212)
90 PLN02824 hydrolase, alpha/beta 26.1 75 0.0016 30.2 3.7 34 169-204 89-123 (294)
91 TIGR02240 PHA_depoly_arom poly 25.9 80 0.0017 29.8 3.8 29 175-205 85-113 (276)
92 cd00741 Lipase Lipase. Lipase 24.5 54 0.0012 28.3 2.2 17 186-202 31-47 (153)
93 PLN02965 Probable pheophorbida 24.3 75 0.0016 29.7 3.2 21 185-205 74-94 (255)
94 PRK11071 esterase YqiA; Provis 24.2 97 0.0021 28.1 3.9 34 169-204 48-82 (190)
95 TIGR03101 hydr2_PEP hydrolase, 24.1 89 0.0019 30.4 3.8 32 171-204 89-120 (266)
96 cd02253 DmpA L-Aminopeptidase 24.0 72 0.0016 32.4 3.1 27 154-180 82-108 (339)
97 PF00326 Peptidase_S9: Prolyl 23.8 63 0.0014 29.3 2.6 34 169-202 49-83 (213)
98 PRK03592 haloalkane dehalogena 23.7 91 0.002 29.7 3.8 34 170-205 81-115 (295)
99 PRK13604 luxD acyl transferase 23.7 96 0.0021 31.1 4.0 33 168-202 95-127 (307)
100 TIGR03230 lipo_lipase lipoprot 23.6 1.2E+02 0.0026 31.9 4.8 37 167-203 102-139 (442)
101 PRK00870 haloalkane dehalogena 22.5 99 0.0021 29.7 3.8 28 175-204 109-136 (302)
102 PRK06489 hypothetical protein; 22.3 93 0.002 31.0 3.6 27 178-205 150-176 (360)
103 TIGR02816 pfaB_fam PfaB family 21.9 2.2E+02 0.0048 30.8 6.5 41 170-212 253-295 (538)
104 TIGR03343 biphenyl_bphD 2-hydr 21.9 92 0.002 29.1 3.4 34 169-204 88-122 (282)
105 TIGR01392 homoserO_Ac_trn homo 21.4 99 0.0022 30.7 3.6 30 174-204 119-148 (351)
106 KOG1454 Predicted hydrolase/ac 21.1 1.5E+02 0.0033 29.6 4.9 52 152-205 88-150 (326)
107 TIGR03611 RutD pyrimidine util 20.9 1.1E+02 0.0024 27.4 3.6 20 185-204 82-101 (257)
108 PLN02679 hydrolase, alpha/beta 20.7 1.2E+02 0.0026 30.4 4.0 27 175-203 149-175 (360)
109 COG2021 MET2 Homoserine acetyl 20.4 1E+02 0.0022 31.7 3.4 38 173-212 137-175 (368)
110 KOG2551 Phospholipase/carboxyh 20.3 94 0.002 29.8 2.9 29 171-202 95-123 (230)
111 PRK11460 putative hydrolase; P 20.3 1.3E+02 0.0029 28.1 4.1 34 170-203 89-123 (232)
No 1
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=100.00 E-value=6.5e-45 Score=345.95 Aligned_cols=231 Identities=64% Similarity=1.032 Sum_probs=202.1
Q ss_pred EEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCCcccchHHHH
Q 015942 155 GFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRRGTAFRLGAVLR 234 (398)
Q Consensus 155 aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~g~~~~~~~~l~ 234 (398)
+|+|||||++|+||+||+++|+|+|+.++++.|+|+||||++|+++++|.+.+++.+.+.++...++..+..++.+..++
T Consensus 1 glsfsggG~lg~yh~GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (233)
T cd07224 1 GFSFSAAGLLFPYHLGVLSLLIEAGVINETTPLAGASAGSLAAACSASGLSPEEALEATEELAEDCRSNGTAFRLGGVLR 80 (233)
T ss_pred CeeecchHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCCcccHHHHHH
Confidence 68999999999999999999999999887899999999999999999999999999998888888888888888889999
Q ss_pred HHHHHhCCCchhhhcC-CcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccceeCCeEEEeccccCC
Q 015942 235 DILQKFLPDDVHTRSS-GRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMFRNRLCIDGGLTLF 313 (398)
Q Consensus 235 ~~L~~~l~~~~~e~~~-~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~~G~~yvDGGl~~n 313 (398)
+.++++++.+.++.++ +++.|++|++.+..++++++.|.+++++++||+|||++|++|+|++...++|+.|+|||+++|
T Consensus 81 ~~l~~~lp~d~~e~~~~~~l~i~~T~~~~~~~~~~v~~f~~~~~l~~al~AS~~iP~~~~p~~~v~~~G~~~vDGG~~~~ 160 (233)
T cd07224 81 DELDKTLPDDAHERCNRGRIRVAVTQLFPVPRGLLVSSFDSKSDLIDALLASCNIPGYLAPWPATMFRGKLCVDGGFALF 160 (233)
T ss_pred HHHHHHcCcHHHHHhcCCCEEEEEEecccCCCceEEEecCCcchHHHHHHHhccCCcccCCCCCeeECCEEEEeCCcccC
Confidence 9999999999999988 999999999974435777888888999999999999999999965222799999999999999
Q ss_pred CCch-hhccceeecCCchhhcccccceecCCCCCCCcchhccccceEEccCCHHHHHHHHHHHHHHHHHHHHh
Q 015942 314 MPPT-SASNTIRVCAFPASALRLQGIGISPDCNPENRASRRELFNWALEPAEDQILDKLFEFGYLDAAVWAEN 385 (398)
Q Consensus 314 ~P~~-~~~~ti~v~~f~~~~lg~~~i~I~~~~~~~~~~s~~~l~~~~l~P~~~~~l~elf~~Gy~dA~~~l~~ 385 (398)
+|+. ...++|+||||++....+....|.++.+..+..+..++++|+++|++.+.+++||++||+||++|+++
T Consensus 161 ~P~~~~~~~~v~v~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~p~~~~~l~~~~~~g~~da~~~~~~ 233 (233)
T cd07224 161 IPPTTAADRTVRVCPFPASRSSIKGQNLDNDDTEDVPYSRRQLLNWALEPADDAMLLELFNEGYKDANEWAKE 233 (233)
T ss_pred CCCCCCCCCEEEEeCCCccccccccCCCCCcccccccccHHHHHHHHHcCCCHHHHHHHHHhccHHHHHHhhC
Confidence 9998 66689999999987654444445444444444555677889999999999999999999999999975
No 2
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=100.00 E-value=2.1e-44 Score=345.16 Aligned_cols=227 Identities=33% Similarity=0.546 Sum_probs=195.0
Q ss_pred CCcEEEEcCCcchHHHHHHHHHHHHHcCC--CCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc--C---
Q 015942 152 TTPGFSFSAAGLLFPYHLGVAQLLIEKGY--IKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRR--G--- 224 (398)
Q Consensus 152 ~~~aLvLsGGG~rG~~hiGVlkaL~e~gl--~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~--g--- 224 (398)
.+.+|+|+|||+||+||+||+++|+|+|+ +.+++.|+|+||||++|+.+++|.+.+++.+.+.++.+..+.+ +
T Consensus 3 ~~~~LsfsGGG~rG~yh~GVl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~a~g~~~~~~~~~~~~~a~~~r~~~~g~~~ 82 (249)
T cd07220 3 SGWNISFAGCGFLGVYHVGVASCLLEHAPFLVANARKIYGASAGALTATALVTGVCLGECGASVIRVAKEARKRFLGPLH 82 (249)
T ss_pred CCceEEEeChHHHHHHHHHHHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHcCCCHHHHHHHHHHHHHHhhHhhccCcc
Confidence 57899999999999999999999999984 4447999999999999999999999888888777776544432 2
Q ss_pred CcccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccceeCCeE
Q 015942 225 TAFRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMFRNRL 304 (398)
Q Consensus 225 ~~~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~~G~~ 304 (398)
+.+.+.+.+++.+.+.+++++++.+++|+.|++|++. ++++++++.|+++++|++||+|||++|+|+...+. .++|+.
T Consensus 83 ~~~~l~~~l~~~l~~~lp~~a~~~~~~~l~is~T~~~-tg~~~~~s~f~s~~dLi~al~AScsiP~~~g~~P~-~~~G~~ 160 (249)
T cd07220 83 PSFNLVKILRDGLLRTLPENAHELASGRLGISLTRVS-DGENVLVSDFNSKEELIQALVCSCFIPVYCGLIPP-TLRGVR 160 (249)
T ss_pred ccchHHHHHHHHHHHHCChhhHHHCCCcEEEEEEECC-CCCEEEEecCCCcchHHHHHHHhccCccccCCCCe-eECCEE
Confidence 3455677899999999999999999999999999998 89999999999999999999999999988754432 699999
Q ss_pred EEeccccCCCCchhhccceeecCCchhhcccccceecCCCCCCCcc-----------hhccc--cceEEccCCHHHHHHH
Q 015942 305 CIDGGLTLFMPPTSASNTIRVCAFPASALRLQGIGISPDCNPENRA-----------SRREL--FNWALEPAEDQILDKL 371 (398)
Q Consensus 305 yvDGGl~~n~P~~~~~~ti~v~~f~~~~lg~~~i~I~~~~~~~~~~-----------s~~~l--~~~~l~P~~~~~l~el 371 (398)
|+|||+++|+|+....+||+||||+|+ .+|||++.+.+.. +..++ +.|+++||+++.++++
T Consensus 161 yvDGGvsdnlPv~~~~~titVspf~~~------~di~p~~~~~~~~~~~~~~~~~~~~~~n~~r~~~~l~pp~~~~l~~~ 234 (249)
T cd07220 161 YVDGGISDNLPQYELKNTITVSPFSGE------SDICPRDSSTNFHELRFTNTSIQFNLRNLYRLSKALFPPEPQVLAEM 234 (249)
T ss_pred EEcCCcccCCCCCCCCCeEEEecCccC------CCcCCCCCCcccceeEEecceEEeeHHHHHHHHHhhcCCCHHHHHHH
Confidence 999999999999998899999999975 4589988753221 12222 4689999999999999
Q ss_pred HHHHHHHHHHHHHhC
Q 015942 372 FEFGYLDAAVWAENN 386 (398)
Q Consensus 372 f~~Gy~dA~~~l~~~ 386 (398)
|++||+||.+||++|
T Consensus 235 ~~~g~~da~~~l~~~ 249 (249)
T cd07220 235 CKQGYRDALRFLKEN 249 (249)
T ss_pred HHcchHHHHHHHhcC
Confidence 999999999999986
No 3
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=100.00 E-value=6.9e-44 Score=355.36 Aligned_cols=233 Identities=27% Similarity=0.447 Sum_probs=198.5
Q ss_pred hccCCCcEEEEcCCcchHHHHHHHHHHHHHcCC--CCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc--
Q 015942 148 RRVVTTPGFSFSAAGLLFPYHLGVAQLLIEKGY--IKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRR-- 223 (398)
Q Consensus 148 ~~~~~~~aLvLsGGG~rG~~hiGVlkaL~e~gl--~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~-- 223 (398)
+...++.+|+|+|||+||+||+||+++|+|++. +..++.|+|+||||++|+++++|.+.+++.+.+..+.+.++.+
T Consensus 7 g~~~~~~gLvFsGGGfrGiYHvGVl~aL~E~gp~ll~~~d~IaGtSAGALvAAl~asG~s~de~~r~~~~~~~~~r~~~l 86 (382)
T cd07219 7 GDPDTPHSISFSGSGFLSFYQAGVVDALRDLAPRMLETAHRVAGTSAGSVIAALVVCGISMDEYLRVLNVGVAEVRKSFL 86 (382)
T ss_pred CCCCCCceEEEcCcHHHHHHHHHHHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhc
Confidence 445678999999999999999999999999983 5458999999999999999999999999888876655444332
Q ss_pred C---CcccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCccccee
Q 015942 224 G---TAFRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMF 300 (398)
Q Consensus 224 g---~~~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~ 300 (398)
+ +.+.+.+.++++|++.+++++++...++|+|++|++. ++++++++.|+++++|++||+|||+||+|+..++. .+
T Consensus 87 G~~~p~~~l~~~lr~~L~~~LP~da~e~~~g~L~IsaTdl~-tGknv~fS~F~S~~dLidAV~AScaIP~y~G~~Pp-~i 164 (382)
T cd07219 87 GPLSPSCKMVQMMRQFLYRVLPEDSYKVATGKLHVSLTRVT-DGENVVVSEFTSKEELIEALYCSCFVPVYCGLIPP-TY 164 (382)
T ss_pred cCccccchHHHHHHHHHHhhCcHhhHHhCCCcEEEEEEECC-CCCEEEEeccCCcchHHHHHHHHccCccccCCcCe-EE
Confidence 1 2334457889999999999999999999999999998 89999999999999999999999999999754433 79
Q ss_pred CCeEEEeccccCCCCchhhccceeecCCchhhcccccceecCCCCCCCc-----------chhcc--ccceEEccCCHHH
Q 015942 301 RNRLCIDGGLTLFMPPTSASNTIRVCAFPASALRLQGIGISPDCNPENR-----------ASRRE--LFNWALEPAEDQI 367 (398)
Q Consensus 301 ~G~~yvDGGl~~n~P~~~~~~ti~v~~f~~~~lg~~~i~I~~~~~~~~~-----------~s~~~--l~~~~l~P~~~~~ 367 (398)
+|+.|+|||+++|+|+....+||+||||+|+ .+|||+.++.+. .+..+ .+.|+++||+.++
T Consensus 165 rG~~yVDGGvsdnlPv~~~~~TitvSpF~g~------~dIcP~d~~~~~~~~~~~n~s~~~s~~N~~r~~~alfPP~~~~ 238 (382)
T cd07219 165 RGVRYIDGGFTGMQPCSFWTDSITISTFSGQ------QDICPRDCPAIFHDFRIFNCSFQFSLENIARMTHALFPPDLMV 238 (382)
T ss_pred CCEEEEcCCccCCcCccCCCCcEEEcCCcCC------CCcCCCCCCcccceeeeecceeeecHHHHHHHhHhhcCCCHHH
Confidence 9999999999999999888899999999975 358998776321 11222 2468999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCC
Q 015942 368 LDKLFEFGYLDAAVWAENNPI 388 (398)
Q Consensus 368 l~elf~~Gy~dA~~~l~~~~~ 388 (398)
++++|++||+||.+||++++.
T Consensus 239 l~~~~~~Gy~Da~~fl~~~~~ 259 (382)
T cd07219 239 LHDYYYRGYQDTVLYLRRLNA 259 (382)
T ss_pred HHHHHHhhHHHHHHHHHHcCC
Confidence 999999999999999999987
No 4
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=100.00 E-value=1.1e-43 Score=352.76 Aligned_cols=229 Identities=28% Similarity=0.439 Sum_probs=200.0
Q ss_pred CCCcEEEEcCCcchHHHHHHHHHHHHHcC--CCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc--C--
Q 015942 151 VTTPGFSFSAAGLLFPYHLGVAQLLIEKG--YIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRR--G-- 224 (398)
Q Consensus 151 ~~~~aLvLsGGG~rG~~hiGVlkaL~e~g--l~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~--g-- 224 (398)
.++.+|+|+|||++|+||+||+++|.|++ ++.+.+.|+|+|||||+|+++++|.+++++.+.+.++.+..+.. |
T Consensus 7 ~~~~~LsfSGgGflG~yHvGV~~~L~e~~p~ll~~~~~iaGaSAGAL~aa~~a~g~~~~~~~~~i~~ia~~~r~~~lG~~ 86 (405)
T cd07223 7 EGGWNLSFSGAGYLGLYHVGVTECLRQRAPRLLQGARRIYGSSSGALNAVSIVCGKSADFCCSNLLGMVKHLERLSLGIF 86 (405)
T ss_pred CCCEEEEEeCcHHHHHHHHHHHHHHHHhCchhhccCCeeeeeCHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhccCCC
Confidence 46889999999999999999999999997 55567889999999999999999999998888888777666543 2
Q ss_pred -CcccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccc--cCCcccceeC
Q 015942 225 -TAFRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGY--LAPRPATMFR 301 (398)
Q Consensus 225 -~~~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~--f~pv~~~~~~ 301 (398)
+.+++.+.+++.|++++|+++|+.+++||+|++|++. +++++++++|.++++||+|++|||+||+| |.|. .++
T Consensus 87 ~p~f~l~~~lr~~L~~~LP~daHe~~sgrL~ISlT~l~-~gknvlvS~F~SredLIqALlASc~IP~y~g~~P~---~~r 162 (405)
T cd07223 87 HPAYAPIEHIRQQLQESLPPNIHILASQRLGISMTRWP-DGRNFIVTDFATRDELIQALICTLYFPFYCGIIPP---EFR 162 (405)
T ss_pred CccccHHHHHHHHHHHhCCchhhHHhCCceEEEEEEcc-CCceEEecCCCCHHHHHHHHHHhccCccccCCCCc---eEC
Confidence 4567788999999999999999999999999999987 89999999999999999999999999999 5555 899
Q ss_pred CeEEEeccccCCCCchhhccceeecCCchhhcccccceecCCCCCCCcch--------------hccccceEEccCCHHH
Q 015942 302 NRLCIDGGLTLFMPPTSASNTIRVCAFPASALRLQGIGISPDCNPENRAS--------------RRELFNWALEPAEDQI 367 (398)
Q Consensus 302 G~~yvDGGl~~n~P~~~~~~ti~v~~f~~~~lg~~~i~I~~~~~~~~~~s--------------~~~l~~~~l~P~~~~~ 367 (398)
|++|||||+++|+|+.....||+||||.|+ .+|||+..+.+... ....++ +++||+.++
T Consensus 163 G~~yVDGGvsnNLP~~~~~~TItVSPF~G~------~DICP~d~s~n~~~vr~~n~si~~~~~N~~r~~~-aLfPP~~~~ 235 (405)
T cd07223 163 GERYIDGALSNNLPFSDCPSTITVSPFHGT------VDICPQSTSANLHELNAFNASFQISTRNFFLGLK-CLIPPKPEV 235 (405)
T ss_pred CEEEEcCcccccCCCcCCCCeEEEcCCCCC------cccCcCCCCCcceEEeeeeeehhhchhhhHhhcC-EEeCCCHHH
Confidence 999999999999998877789999999975 45888876543221 123344 788889999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcc
Q 015942 368 LDKLFEFGYLDAAVWAENNPIEK 390 (398)
Q Consensus 368 l~elf~~Gy~dA~~~l~~~~~~~ 390 (398)
++++|++||+||.+||+++++..
T Consensus 236 l~ei~~~GY~DAlrfL~~~gl~~ 258 (405)
T cd07223 236 VADNCRQGYLDALRFLERRGLTK 258 (405)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999998765
No 5
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=100.00 E-value=1.4e-43 Score=340.34 Aligned_cols=229 Identities=33% Similarity=0.524 Sum_probs=196.6
Q ss_pred cEEEEcCCcchHHHHHHHHHHHHHcC--CCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcC-----Cc
Q 015942 154 PGFSFSAAGLLFPYHLGVAQLLIEKG--YIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRRG-----TA 226 (398)
Q Consensus 154 ~aLvLsGGG~rG~~hiGVlkaL~e~g--l~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~g-----~~ 226 (398)
..|+|+|||+||+||+||+++|+|++ ++.+++.|+||||||++|+++++|.+.+++.+.+.++.+..+.+. +.
T Consensus 1 ~~Lsl~GGG~rG~yh~GVl~aL~e~~~~l~~~~~~i~GtSAGAl~aa~~asg~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 80 (252)
T cd07221 1 WSLSFAGCGFLGFYHVGVTRCLSERAPHLLRDARMFFGASAGALHCVTFLSGLPLDQILQILMDLVRSARSRNIGILHPS 80 (252)
T ss_pred CEEEEeCcHHHHHHHHHHHHHHHHhCcchhccCCEEEEEcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcccccccccCcc
Confidence 36999999999999999999999997 345589999999999999999999999999988888776544332 45
Q ss_pred ccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccceeCCeEEE
Q 015942 227 FRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMFRNRLCI 306 (398)
Q Consensus 227 ~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~~G~~yv 306 (398)
+..+..+++.+++.+|.+.++...+++.|++|++. +++++++++|+++++|++||+|||+||+++...|. .++|+.|+
T Consensus 81 ~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~~T~l~-tg~~v~~~~f~s~~~l~~av~AS~siP~~~g~~P~-~~~G~~yv 158 (252)
T cd07221 81 FNLSKHLRDGLQRHLPDNVHQLISGKMCISLTRVS-DGENVLVSDFHSKDEVVDALVCSCFIPFFSGLIPP-SFRGVRYV 158 (252)
T ss_pred cCHHHHHHHHHHHHCCcCHHHhcCCCEEEEEEECC-CCCEEEEecCCCchHHHHHHHHHccCccccCCCCe-EECCEEEE
Confidence 67788999999999999988888899999999997 88999999999999999999999999999654433 79999999
Q ss_pred eccccCCCCchhhccceeecCCchhhcccccceecCCCCCCCcch-------------hccccceEEccCCHHHHHHHHH
Q 015942 307 DGGLTLFMPPTSASNTIRVCAFPASALRLQGIGISPDCNPENRAS-------------RRELFNWALEPAEDQILDKLFE 373 (398)
Q Consensus 307 DGGl~~n~P~~~~~~ti~v~~f~~~~lg~~~i~I~~~~~~~~~~s-------------~~~l~~~~l~P~~~~~l~elf~ 373 (398)
|||+++|+|+..+.++|+||||+|+ .+|||+..+.+... ....+.++++||+.+.++++|+
T Consensus 159 DGGv~dnlPv~~~~~~I~Vspf~~~------~di~p~~~~~~~~~~~~~~~~~~~~~~n~~~~~~a~~pp~~~~l~~~~~ 232 (252)
T cd07221 159 DGGVSDNVPFFDAKTTITVSPFYGE------YDICPKVKSTNFLHVDFTKLSLRLCTENLYLLTRALFPPDVKVLGEICL 232 (252)
T ss_pred eCCcccCCCccCCCCeEEEecCcCC------CCcCCCCCCccceeeeeecceEEeeHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 9999999999988889999999975 45888877643221 1123345789999999999999
Q ss_pred HHHHHHHHHHHhCCCcc
Q 015942 374 FGYLDAAVWAENNPIEK 390 (398)
Q Consensus 374 ~Gy~dA~~~l~~~~~~~ 390 (398)
+||+||++||++||+..
T Consensus 233 ~G~~da~~~l~~~~~~~ 249 (252)
T cd07221 233 RGYLDAFRFLEENGICN 249 (252)
T ss_pred hhHHHHHHHHHHCCCcc
Confidence 99999999999999764
No 6
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=100.00 E-value=2.3e-43 Score=337.30 Aligned_cols=221 Identities=41% Similarity=0.602 Sum_probs=186.7
Q ss_pred EEEEcCCcchHHHHHHHHHHHHHcCCC--CCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc--C---Ccc
Q 015942 155 GFSFSAAGLLFPYHLGVAQLLIEKGYI--KETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRR--G---TAF 227 (398)
Q Consensus 155 aLvLsGGG~rG~~hiGVlkaL~e~gl~--~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~--g---~~~ 227 (398)
.|+|+|||+||+||+||+++|+|+|+. ++++.|+||||||++|+++++|.+++++.+.+.++....+.. + +.+
T Consensus 1 ~LslsGGG~~G~yh~GVl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 80 (243)
T cd07204 1 NLSFSGCGFLGIYHVGVASALREHAPRLLQNARRIAGASAGAIVAAVVLCGVSMEEACSFILKVVSEARRRSLGPLHPSF 80 (243)
T ss_pred CeeEcchHHHHHHHHHHHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhhhcCcccccc
Confidence 489999999999999999999999964 335699999999999999999999999877776665544322 2 234
Q ss_pred cchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhccccccc--CCcccceeCCeEE
Q 015942 228 RLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYL--APRPATMFRNRLC 305 (398)
Q Consensus 228 ~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f--~pv~~~~~~G~~y 305 (398)
...+.+++.+++.+++++++.+++|++|++|++. ++++++++.|+++++|++||+|||++|+++ .|+ .++|+.|
T Consensus 81 ~~~~~l~~~l~~~lp~~~~~~~~~~l~I~~T~l~-~g~~~~~~~f~s~~~Li~Al~AS~~iP~~~g~~P~---~~~G~~~ 156 (243)
T cd07204 81 NLLKILRQGLEKILPDDAHELASGRLHISLTRVS-DGENVLVSEFDSKEELIQALVCSCFIPFYCGLIPP---KFRGVRY 156 (243)
T ss_pred hHHHHHHHHHHHHCChhHHHhcCCCEEEEEEECC-CCCEEEEecCCCchHHHHHHHHhccCCcccCCCCe---EECCEEE
Confidence 4456788899999999999999999999999998 889999999999999999999999999995 565 8999999
Q ss_pred EeccccCCCCchhhccceeecCCchhhcccccceecCCCCCCCc-----------ch--hccccceEEccCCHHHHHHHH
Q 015942 306 IDGGLTLFMPPTSASNTIRVCAFPASALRLQGIGISPDCNPENR-----------AS--RRELFNWALEPAEDQILDKLF 372 (398)
Q Consensus 306 vDGGl~~n~P~~~~~~ti~v~~f~~~~lg~~~i~I~~~~~~~~~-----------~s--~~~l~~~~l~P~~~~~l~elf 372 (398)
+|||+++|+|+..+.+||+||||+++. +|+|+..+.+. .+ .....+|+++|+++++++++|
T Consensus 157 vDGGv~~~lP~~~~~~tv~vspf~~~~------~i~p~~~~~~~~~~~~~~~~i~~~~~~~~~~~~al~p~~~~~l~~~~ 230 (243)
T cd07204 157 IDGGLSDNLPILDDENTITVSPFSGES------DICPQDKSSNLLEVNIANTSIQLSLENLYRLNRALFPPSLEILSRMC 230 (243)
T ss_pred EeCCcccCCCCCCCCCeEEEecCCCCC------CcCCCcccccceeeeeeCceeeccHHHHHHHHhcccCCCHHHHHHHH
Confidence 999999999999888999999999752 37777654321 11 123356789999999999999
Q ss_pred HHHHHHHHHHHHh
Q 015942 373 EFGYLDAAVWAEN 385 (398)
Q Consensus 373 ~~Gy~dA~~~l~~ 385 (398)
++||+||++||++
T Consensus 231 ~~G~~da~~~l~~ 243 (243)
T cd07204 231 QQGYLDALRFLER 243 (243)
T ss_pred HhhHHHHHHHHhC
Confidence 9999999999985
No 7
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=100.00 E-value=7.3e-43 Score=334.09 Aligned_cols=226 Identities=31% Similarity=0.507 Sum_probs=190.9
Q ss_pred cEEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc-----CCccc
Q 015942 154 PGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRR-----GTAFR 228 (398)
Q Consensus 154 ~aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~-----g~~~~ 228 (398)
.+|+|+|||+||+||+||+++|+|+|....++.|+|+||||++|+.+++|.+++++.+.+.++.+..+.. .+.+.
T Consensus 1 ~~LsfsGGG~rG~yh~GVl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~~~~~~~~~~~~~~~~~~~~~lg~~~p~~~ 80 (245)
T cd07218 1 MNLSFAGCGFLGIYHVGVAVCLKKYAPHLLLNKISGASAGALAACCLLCDLPLGEMTSDFLRVVREARRHSLGPFSPSFN 80 (245)
T ss_pred CcEEEeCcHHHHHHHHHHHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhcccCCccccC
Confidence 3699999999999999999999999943236889999999999999999999888887777666544322 14566
Q ss_pred chHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccceeCCeEEEec
Q 015942 229 LGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMFRNRLCIDG 308 (398)
Q Consensus 229 ~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~~G~~yvDG 308 (398)
....+++.++++++++.++...+++.|++|++. ++++++++.|+++++|++|++|||+||+++...|. .++|+.|+||
T Consensus 81 l~~~l~~~l~~~lp~d~~~~~~~~L~i~~T~l~-~g~~~~~s~f~s~~dLi~al~AS~~IP~~~g~~P~-~~~G~~~vDG 158 (245)
T cd07218 81 IQTCLLEGLQKFLPDDAHERVSGRLHISLTRVS-DGKNVIVSEFESREELLQALLCSCFIPVFSGLLPP-KFRGVRYMDG 158 (245)
T ss_pred HHHHHHHHHHHHCCcchHHhCCCCEEEEEEECC-CCCeEEEecCCCcchHHHHHHHhcCCCcccCCCCe-EECCEEEEcC
Confidence 678999999999999999999999999999997 88999999999999999999999999999644433 7899999999
Q ss_pred cccCCCCchhhccceeecCCchhhcccccceecCCCCCCCc-----------chhccc--cceEEccCCHHHHHHHHHHH
Q 015942 309 GLTLFMPPTSASNTIRVCAFPASALRLQGIGISPDCNPENR-----------ASRREL--FNWALEPAEDQILDKLFEFG 375 (398)
Q Consensus 309 Gl~~n~P~~~~~~ti~v~~f~~~~lg~~~i~I~~~~~~~~~-----------~s~~~l--~~~~l~P~~~~~l~elf~~G 375 (398)
|+++|+|+.. .+||+||||.+. .+|+|++.+... .+..++ +.++++||+++.++++|++|
T Consensus 159 Gv~dnlP~~~-~~ti~vspf~~~------~di~p~~~~~~~~~~~~~~~~~~~~~~n~~r~~~~l~pp~~~~l~~~~~~g 231 (245)
T cd07218 159 GFSDNLPTLD-ENTITVSPFCGE------SDICPRDNSSQLFHINWANTSIELSRQNIYRLVRILFPPRPEVLSSLCQQG 231 (245)
T ss_pred cccCCCCCCC-CceEEEeCCCCC------CCcCCCcCCCccceEEeecCeeeeeHHHHHHHHHhhcCCCHHHHHHHHHhh
Confidence 9999999965 489999999864 358888765321 111222 34689999999999999999
Q ss_pred HHHHHHHHHhCCC
Q 015942 376 YLDAAVWAENNPI 388 (398)
Q Consensus 376 y~dA~~~l~~~~~ 388 (398)
|+||++||+++|+
T Consensus 232 ~~da~~~l~~~~~ 244 (245)
T cd07218 232 FDDALRFLHRNNL 244 (245)
T ss_pred hHHHHHHHHHcCC
Confidence 9999999999986
No 8
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=100.00 E-value=1.8e-41 Score=346.77 Aligned_cols=245 Identities=18% Similarity=0.207 Sum_probs=197.6
Q ss_pred HHhccccccccccCCCC-CcceecccCCCChhhHHHHHHhhhhcc------CCCCccHHHhhhhhHHhhhhccCCCcEEE
Q 015942 85 RLLNGSNRLAANNFETI-PLIERSEKLGSSGEDYKERIGAVMEDE------IEPEVIWEQRVRDIEAEKERRVVTTPGFS 157 (398)
Q Consensus 85 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~ee~i~~v~~~~------~~~~~~~~~k~~~~~a~~~~~~~~~~aLv 157 (398)
.++|++.. |||||+ +.+||+++|.|||.+||+||+||.++. ...+++.++|++||+ ++++++|++||+
T Consensus 3 ~~lr~~l~---rn~g~i~~~~Ly~~~~~GTK~lIe~Yi~ev~~~l~~l~~~~~~~~~~~~kl~ff~--~~~~~~GrtALv 77 (421)
T cd07230 3 YLIRTTLS---RDLGNMGNVNLYRHSHVGTKKLIERYITEALLTLEYLVDDDEDGLEDRYLLGMLL--QTRKNFGRTALL 77 (421)
T ss_pred hHHhhhhh---cccccCCCHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHcCCCCCcchHHHHHHHH--HHHHhcCCEEEE
Confidence 46777766 999998 899999999999999999999999863 445688899999999 999999999999
Q ss_pred EcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHH-------------------
Q 015942 158 FSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAE------------------- 218 (398)
Q Consensus 158 LsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~------------------- 218 (398)
|+|||++|+||+||+++|+|+|+. +++|+||||||++|+++|++. .+|+.+.+..+..
T Consensus 78 LsGGG~rG~~hiGVLkaL~E~gl~--p~vIsGTSaGAivAal~as~~-~eel~~~l~~~~~~~~~~f~~~~~~~~~~~~~ 154 (421)
T cd07230 78 LSGGGTFGMFHIGVLKALFEANLL--PRIISGSSAGSIVAAILCTHT-DEEIPELLEEFPYGDFNVFEDPDQEENVLQKL 154 (421)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCC--CCEEEEECHHHHHHHHHHcCC-HHHHHHHHHhcchHHHHHHhcccccchHHHHH
Confidence 999999999999999999999998 479999999999999999965 4776665543210
Q ss_pred -HHHhcCCcccchHHHHHHHHHhCCCchhhhc---CCc-EEEEEEeccCCCceeEEeccCChhh-HHHHHHHhccccccc
Q 015942 219 -NCRRRGTAFRLGAVLRDILQKFLPDDVHTRS---SGR-VRVAVTQILWRPRGLLVDQFDSKED-LINAVLTSSFIPGYL 292 (398)
Q Consensus 219 -~~~~~g~~~~~~~~l~~~L~~~l~~~~~e~~---~~r-L~I~aT~l~~~~~~~l~~~f~s~~~-LidAV~AS~aiP~~f 292 (398)
.+...++.++ .+.+.+++++.+++.+|+++ +++ ++|++++......+.+++++++++. +++||+||||+|++|
T Consensus 155 ~~l~~~g~~~d-~~~l~~~l~~~lgd~tF~Eay~rt~r~L~I~vt~~~~~~~p~llny~t~p~v~I~~AV~AS~AlP~vf 233 (421)
T cd07230 155 SRFLKYGSWFD-ISHLTRVMRGFLGDLTFQEAYNRTRRILNITVSPASIYELPRLLNYITAPNVLIWSAVCASCSVPGVF 233 (421)
T ss_pred HHHHhcCCCcC-HHHHHHHHHHHhCCCCHHHHHHhhCCeEEEEEEeccccCCCeeeeeccCCCcHHHHHHHHhcCchhhc
Confidence 0112344555 78999999999999998765 344 8999988764455678888888776 569999999999999
Q ss_pred CCcccce----------e--CCeEEEeccccCCCCchhhccceeecCCchhhcccccceecCCCCCCCc
Q 015942 293 APRPATM----------F--RNRLCIDGGLTLFMPPTSASNTIRVCAFPASALRLQGIGISPDCNPENR 349 (398)
Q Consensus 293 ~pv~~~~----------~--~G~~yvDGGl~~n~P~~~~~~ti~v~~f~~~~lg~~~i~I~~~~~~~~~ 349 (398)
+|+.++. + +|..|+|||+.+|+|+..+.+...|. ..|++++||+..
T Consensus 234 ~pv~l~~Kd~~~g~i~p~~~~g~~~vDGgv~~~iPi~~l~elfnvn-----------~~Ivsqvnphv~ 291 (421)
T cd07230 234 PSSPLYEKDPKTGEIVPWNPSSVKWIDGSVDNDLPMTRLSEMFNVN-----------HFIVSQVNPHVV 291 (421)
T ss_pred CCeEEEeecCCCCceecccCCCCceeCCCccccChHHHHHHhcCCC-----------EEEEEccCcccc
Confidence 9995311 1 27899999999999998874433332 236777877643
No 9
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=100.00 E-value=5.1e-41 Score=342.05 Aligned_cols=239 Identities=19% Similarity=0.212 Sum_probs=195.3
Q ss_pred cccCCCC-CcceecccCCCChhhHHHHHHhhhhcc----CCCCccHHHhhhhhHHhhhhccCCCcEEEEcCCcchHHHHH
Q 015942 95 ANNFETI-PLIERSEKLGSSGEDYKERIGAVMEDE----IEPEVIWEQRVRDIEAEKERRVVTTPGFSFSAAGLLFPYHL 169 (398)
Q Consensus 95 ~~~~~~~-~~~~~~~~~~~t~~~~ee~i~~v~~~~----~~~~~~~~~k~~~~~a~~~~~~~~~~aLvLsGGG~rG~~hi 169 (398)
.|||+|+ +.+||+++|.|||.+||+||+||.++. +.++++.++|++||+ +++++++++||+|+|||++|+||+
T Consensus 6 ~rn~g~i~~~~Ly~~~~~GTK~lIe~yi~ev~~~l~~l~~~~~~~~~~k~~ff~--~~~~~~grtALvLsGGG~rG~~h~ 83 (407)
T cd07232 6 KNNFAGIENGRLYSETYYGTKNLVEEYIDEVEACLKYLRESSQLDLEEKRRLFK--RLSTNYGRTALCLSGGAAFAYYHF 83 (407)
T ss_pred HhHHHhccChhhhhhcccCcHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH--HHHHhcCCEEEEECCcHHHHHHHH
Confidence 4999998 899999999999999999999999874 446789999999999 999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHH-H--------------HHHHhcCCcccchHHHH
Q 015942 170 GVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTL-A--------------ENCRRRGTAFRLGAVLR 234 (398)
Q Consensus 170 GVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~-~--------------~~~~~~g~~~~~~~~l~ 234 (398)
||+++|+|+|++ +++|+||||||++|+++|++.+ +|+.+.+... . ..+...|..++ .+.+.
T Consensus 84 GVlkaL~e~gll--p~iI~GtSAGAivaalla~~t~-~el~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~d-~~~l~ 159 (407)
T cd07232 84 GVVKALLDADLL--PNVISGTSGGSLVAALLCTRTD-EELKQLLVPELARKITACEPPWLVWIPRWLKTGARFD-SVEWA 159 (407)
T ss_pred HHHHHHHhCCCC--CCEEEEECHHHHHHHHHHcCCH-HHHHHHHhhhhhhhhhhccchHHHHHHHHHhcCCCCC-HHHHH
Confidence 999999999998 5899999999999999999654 7776665431 1 11112344555 56777
Q ss_pred HH-HHHhCCCchhhhc---CCc-EEEEEEeccCCCceeEEeccCChhh-HHHHHHHhcccccccCCcccc----------
Q 015942 235 DI-LQKFLPDDVHTRS---SGR-VRVAVTQILWRPRGLLVDQFDSKED-LINAVLTSSFIPGYLAPRPAT---------- 298 (398)
Q Consensus 235 ~~-L~~~l~~~~~e~~---~~r-L~I~aT~l~~~~~~~l~~~f~s~~~-LidAV~AS~aiP~~f~pv~~~---------- 298 (398)
+. ++..+++.+|+++ +++ +.|++++......+.+++++++++. +++||+||||+|++|+|+.++
T Consensus 160 ~~~~~~~~gd~TFeEa~~~tgr~l~I~vt~~d~~~~~~lln~~tsp~v~I~sAV~AS~svPgvf~pv~l~~k~~~g~~~~ 239 (407)
T cd07232 160 RTCCWFTRGSMTFEEAYERTGRILNISVVPADPHSPTILLNYLTSPNCTIWSAVLASAAVPGILNPVVLMMKDPDGTLIP 239 (407)
T ss_pred HHHHHHhcCCCCHHHHHHhcCCEEEEEEEECCCCCceEEeccCCCCccHHHHHHhcccCccccccCeEEEeecCCCCccc
Confidence 77 8889999888765 344 9999998874556678888888875 569999999999999999431
Q ss_pred -eeCCeEEEeccccCCCCchhhccceeecCCchhhcccccceecCCCCCCCcc
Q 015942 299 -MFRNRLCIDGGLTLFMPPTSASNTIRVCAFPASALRLQGIGISPDCNPENRA 350 (398)
Q Consensus 299 -~~~G~~yvDGGl~~n~P~~~~~~ti~v~~f~~~~lg~~~i~I~~~~~~~~~~ 350 (398)
..+|+.|+|||+.+++|+..+.+..+|..| |.+++||+..+
T Consensus 240 ~~~~g~~~~DGgv~~diP~~~l~elfnvn~~-----------Ivsq~nphv~P 281 (407)
T cd07232 240 PFSFGSKWKDGSLRTDIPLKALNTLFNVNFS-----------IVSQVNPHINL 281 (407)
T ss_pred ccCCCCceecCCcCcccHHHHHHHHcCCCee-----------EEeccccccch
Confidence 127789999999999999988665566554 67788886543
No 10
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=100.00 E-value=7.6e-41 Score=320.47 Aligned_cols=223 Identities=31% Similarity=0.533 Sum_probs=183.0
Q ss_pred EEEEcCCcchHHHHHHHHHHHHHcCC--CCCCCcEEeccHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHhc-----CCc
Q 015942 155 GFSFSAAGLLFPYHLGVAQLLIEKGY--IKETTPLAGSSAGAIACAVIASGA-SMQEALNATKTLAENCRRR-----GTA 226 (398)
Q Consensus 155 aLvLsGGG~rG~~hiGVlkaL~e~gl--~~~~d~IaGTSaGAivAalla~g~-~~~el~~~~~~~~~~~~~~-----g~~ 226 (398)
.|+|+|||+||+||+||+++|+|+|+ +++++.|+||||||++|++++++. ..+++.+.+..+.+.++.. .+.
T Consensus 1 ~L~l~GGG~rG~yhiGVl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (246)
T cd07222 1 NLSFAACGFLGIYHLGAAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLTAPEKIEECKEFTYKFAEEVRKQRFGAMTPG 80 (246)
T ss_pred CeeEcccHHHHHHHHHHHHHHHHcCchhhccCCEEEEECHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCCc
Confidence 48999999999999999999999996 445799999999999999999754 2445555555555444332 134
Q ss_pred ccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccc--cCCcccceeCCeE
Q 015942 227 FRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGY--LAPRPATMFRNRL 304 (398)
Q Consensus 227 ~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~--f~pv~~~~~~G~~ 304 (398)
+...+.+++.+++++|++.++..++++.|++|++. ++++++++.|+++++|++||+|||++|++ |+|+ .++|+.
T Consensus 81 ~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~aTdl~-tg~~v~~~~f~s~~~L~~av~AS~aiP~~~g~~pv---~~~G~~ 156 (246)
T cd07222 81 YDFMARLRKGIESILPTDAHELANDRLHVSITNLK-TRKNYLVSNFTSREDLIKVLLASCYVPVYAGLKPV---EYKGQK 156 (246)
T ss_pred chHHHHHHHHHHHHCCHHHHhcCCCcEEEEEEECC-CCCeEEEeccCCcchHHHHHHHhhcCccccCCCCe---EECCEE
Confidence 55567889999999999877667799999999998 88999999999999999999999999998 4777 899999
Q ss_pred EEeccccCCCCchhhccceeecCCchhhcccccceecCCCCCCCc-----------chhc--cccceEEccCCHHHHHHH
Q 015942 305 CIDGGLTLFMPPTSASNTIRVCAFPASALRLQGIGISPDCNPENR-----------ASRR--ELFNWALEPAEDQILDKL 371 (398)
Q Consensus 305 yvDGGl~~n~P~~~~~~ti~v~~f~~~~lg~~~i~I~~~~~~~~~-----------~s~~--~l~~~~l~P~~~~~l~el 371 (398)
|+|||+++|+|+.+..++|+|+||.++ .+|+|+....+. .+.. ....++++||+.++++++
T Consensus 157 ~vDGGv~~~~P~~~~~~~i~v~~~~~~------~di~p~~~~~~~~~~~~~~~s~~~~~~~~~r~~~~l~pp~~~~~~~~ 230 (246)
T cd07222 157 WIDGGFTNSLPVLPVGRTITVSPFSGR------ADICPQDKGQLDLYVRFANQDIMLSLANLVRLNQALFPPNRRKLESY 230 (246)
T ss_pred EEecCccCCCCCCCCCCeEEEecCCCC------CCcCCCCCCCccceEEeecceEEeehhhHHhHhheeeCCCHHHHHHH
Confidence 999999999999988899999999853 457777644321 0111 124579999999999999
Q ss_pred HHHHHHHHHHHHHhCC
Q 015942 372 FEFGYLDAAVWAENNP 387 (398)
Q Consensus 372 f~~Gy~dA~~~l~~~~ 387 (398)
|++||+||++||++++
T Consensus 231 ~~~G~~da~~~l~~~~ 246 (246)
T cd07222 231 YQMGFDDAVRFLKKEN 246 (246)
T ss_pred HHhhHHHHHHHHHhcC
Confidence 9999999999999985
No 11
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=100.00 E-value=4.6e-41 Score=338.26 Aligned_cols=278 Identities=17% Similarity=0.129 Sum_probs=219.6
Q ss_pred HHHHHhccccccccccCCCC-CcceecccCCCChhhHHHHHHhhhhcc-----------CCCCccHHHhhhhhHHhhhhc
Q 015942 82 IASRLLNGSNRLAANNFETI-PLIERSEKLGSSGEDYKERIGAVMEDE-----------IEPEVIWEQRVRDIEAEKERR 149 (398)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~ee~i~~v~~~~-----------~~~~~~~~~k~~~~~a~~~~~ 149 (398)
-+..++|++.. |||||+ +.+||+++|.|||.+||+||+||.++. ....++.++|++||+ ++++
T Consensus 5 ~l~~~Lr~~l~---rNlggi~~~~Ly~~s~~GTK~lIe~Yi~ev~~~L~~l~~~~~~~~~~~~~~~~~kl~ff~--~~r~ 79 (391)
T cd07229 5 TLLNLLRSGLV---RNLGNITSPKLFTRAYAGTKLLIEEYITEVAECLEYVTALQTSPMHSKGFSSQAKLDFFH--DTRQ 79 (391)
T ss_pred HHHHHHHHhhh---ccccccCCHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHhccccccccccCCHHHHHHHHH--HHHH
Confidence 35567788877 999998 899999999999999999999999874 234588999999999 9999
Q ss_pred cCCCcEEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHH----HH-------
Q 015942 150 VVTTPGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTL----AE------- 218 (398)
Q Consensus 150 ~~~~~aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~----~~------- 218 (398)
++|+++|+|+|||++|++|+||+++|+|+|++| ++|+|||+|||+||++|++ +.+|+.+.+... ..
T Consensus 80 ~fGrtAlvlsGGg~~G~~h~Gv~kaL~e~gl~p--~~i~GtS~Gaivaa~~a~~-~~~e~~~~l~~~~~d~~~~~~~~~~ 156 (391)
T cd07229 80 SFGRTALVLQGGSIFGLCHLGVVKALWLRGLLP--RIITGTATGALIAALVGVH-TDEELLRFLDGDGIDLSAFNRLRGK 156 (391)
T ss_pred hcCCEEEEecCcHHHHHHHHHHHHHHHHcCCCC--ceEEEecHHHHHHHHHHcC-CHHHHHHHHhccchhhhhhhhhccc
Confidence 999999999999999999999999999999994 7899999999999999996 457877766421 00
Q ss_pred -------------------HHHhcCCcccchHHHHHHHHHhCCCchhhhc---CCc-EEEEEEeccCCCceeEEeccCCh
Q 015942 219 -------------------NCRRRGTAFRLGAVLRDILQKFLPDDVHTRS---SGR-VRVAVTQILWRPRGLLVDQFDSK 275 (398)
Q Consensus 219 -------------------~~~~~g~~~~~~~~l~~~L~~~l~~~~~e~~---~~r-L~I~aT~l~~~~~~~l~~~f~s~ 275 (398)
.+...|..++ .+.+++++++.+|+.+|+++ ++| |+|++++....+.+.++|+.++|
T Consensus 157 ~~~~~~~~~~~~~~~~~l~r~l~~G~l~D-~~~l~~~lr~~lgd~TFeEAy~rTgriLnItv~~~~~~~~p~LLNylTaP 235 (391)
T cd07229 157 KSLGYSGYGWLGTLGRRIQRLLREGYFLD-VKVLEEFVRANLGDLTFEEAYARTGRVLNITVAPSAVSGSPNLLNYLTAP 235 (391)
T ss_pred cccccccccccchHHHHHHHHHcCCCccc-HHHHHHHHHHHcCCCcHHHHHHhhCCEEEEEEECCCCCCCCeeeecCCCC
Confidence 1112233444 79999999999999999876 466 99999997767788999999999
Q ss_pred hhHH-HHHHHhcccccccC-Ccccce---------eC-------CeEEEeccccCCCCchhhccceeecCCchhhccccc
Q 015942 276 EDLI-NAVLTSSFIPGYLA-PRPATM---------FR-------NRLCIDGGLTLFMPPTSASNTIRVCAFPASALRLQG 337 (398)
Q Consensus 276 ~~Li-dAV~AS~aiP~~f~-pv~~~~---------~~-------G~~yvDGGl~~n~P~~~~~~ti~v~~f~~~~lg~~~ 337 (398)
+.+| +||+||||+|++|. |++++. +. .+++.||.+..++|...+.+..+|.+|
T Consensus 236 nVlIwsAv~aS~a~p~~~~~~~~L~~Kd~~G~ivp~~~~~~~~~~~~~~dgs~~~DlP~~rL~elFNVNhf--------- 306 (391)
T cd07229 236 NVLIWSAALASNASSAALYRSVTLLCKDETGSIVPWPPVQVLFFRSWRGANYSERESPLARLSELFNVNHF--------- 306 (391)
T ss_pred CchHHHHHHHHcCCccccCCCceEEEECCCCCEeeCCCcccccccccccCCCccccChHHHHHHHhCCCce---------
Confidence 9876 99999999999887 776521 11 123568999999999888777777776
Q ss_pred ceecCCCCCCCcchhc----c--c-cceEE-------------ccCCHHHHHHHHHHHHHHH
Q 015942 338 IGISPDCNPENRASRR----E--L-FNWAL-------------EPAEDQILDKLFEFGYLDA 379 (398)
Q Consensus 338 i~I~~~~~~~~~~s~~----~--l-~~~~l-------------~P~~~~~l~elf~~Gy~dA 379 (398)
|.+++||+..+-.. + . .++.| ..|..+.+.+++..|.+.+
T Consensus 307 --IVSQ~nPhv~Pfl~~~~~~~~~~gdItI~P~~~~~d~~~il~nPt~~~l~~~i~~Ger~t 366 (391)
T cd07229 307 --IVSQARPYLAPFLSSDLHENIPGPNITLVPELSFSDFLRLFQNPTTDEIQYWILKGERGV 366 (391)
T ss_pred --EEEccccceeeeecccccccCCCCceEECcCccHHHHHHHhcCCCHHHHHHHHHhchhhc
Confidence 46677775332110 1 0 12333 3345678888888888774
No 12
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=100.00 E-value=7.1e-41 Score=326.18 Aligned_cols=244 Identities=20% Similarity=0.204 Sum_probs=195.0
Q ss_pred cccCCCC-CcceecccCCCChhhHHHHHHhhhhcc------CCCCccHHHhhhhhHHhhhhccCCCcEEEEcCCcchHHH
Q 015942 95 ANNFETI-PLIERSEKLGSSGEDYKERIGAVMEDE------IEPEVIWEQRVRDIEAEKERRVVTTPGFSFSAAGLLFPY 167 (398)
Q Consensus 95 ~~~~~~~-~~~~~~~~~~~t~~~~ee~i~~v~~~~------~~~~~~~~~k~~~~~a~~~~~~~~~~aLvLsGGG~rG~~ 167 (398)
.|||+|+ +.+||+++|.|||.+||+|++||..+. ..++++.++|++||+ ++++.+|+++|+|+|||++|+|
T Consensus 6 ~rn~g~i~~~~Ly~~~~~GTK~lIe~y~~ev~~~l~~~~~~~~~~~~~~~k~~ff~--~~r~~~g~~aLvlsGGg~~g~~ 83 (298)
T cd07206 6 HGNLGNMGNPSLYRHAYFGTKHLIEDYIEEVDLSLEYLALLDTKELSVEEKLDFFR--RARHAFGRTALMLSGGASLGLF 83 (298)
T ss_pred hccccccCCHHHHhhcccCcHHHHHHHHHHHHHHHHHHHcCCCccCCHHHHHHHHH--HHHHhcCCEEEEEcCcHHHHHH
Confidence 4999998 899999999999999999999999864 446788999999999 9999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHhCCCchhh
Q 015942 168 HLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRRGTAFRLGAVLRDILQKFLPDDVHT 247 (398)
Q Consensus 168 hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~g~~~~~~~~l~~~L~~~l~~~~~e 247 (398)
|+||+++|.|+|+. +++|+|+||||++|++++++.+ +|+ +++.+|+
T Consensus 84 h~Gvl~aL~e~~l~--~~~i~GtSaGAi~aa~~~~~~~-~El-------------------------------~gdlTf~ 129 (298)
T cd07206 84 HLGVVKALWEQDLL--PRVISGSSAGAIVAALLGTHTD-EEL-------------------------------IGDLTFQ 129 (298)
T ss_pred HHHHHHHHHHcCCC--CCEEEEEcHHHHHHHHHHcCCc-HHH-------------------------------HcCCCHH
Confidence 99999999999998 5799999999999999999876 443 4555554
Q ss_pred hc---CC-cEEEEEEeccCCCceeEEeccCChhh-HHHHHHHhcccccccCCcccc----------eeCCeEEEeccccC
Q 015942 248 RS---SG-RVRVAVTQILWRPRGLLVDQFDSKED-LINAVLTSSFIPGYLAPRPAT----------MFRNRLCIDGGLTL 312 (398)
Q Consensus 248 ~~---~~-rL~I~aT~l~~~~~~~l~~~f~s~~~-LidAV~AS~aiP~~f~pv~~~----------~~~G~~yvDGGl~~ 312 (398)
++ ++ .++|++|+......+.+++++++++. +++||+||||+|++|+|+.++ .++|+.|+|||+.+
T Consensus 130 EA~~~tgr~lnI~vt~~~~~~~~~lln~~tspnv~i~sAv~AS~slP~~f~pv~l~~k~~~g~~~p~~~g~~~~DGgv~~ 209 (298)
T cd07206 130 EAYERTGRIINITVAPAEPHQNSRLLNALTSPNVLIWSAVLASCAVPGVFPPVMLMAKNRDGEIVPYLPGRKWVDGSVSD 209 (298)
T ss_pred HHHHhcCCEEEEEEEECCCCCceEEecccCCCchHHHHHHhhccCccccccCeEEEeecCCCccccCCCCCcccCCCcCc
Confidence 43 34 49999998874445677888877754 679999999999999999431 12788999999999
Q ss_pred CCCchhhccceeecCCchhhcccccceecCCCCCCCcchh-ccccce-------------EEccCCHHHHHHHHHHHHHH
Q 015942 313 FMPPTSASNTIRVCAFPASALRLQGIGISPDCNPENRASR-RELFNW-------------ALEPAEDQILDKLFEFGYLD 378 (398)
Q Consensus 313 n~P~~~~~~ti~v~~f~~~~lg~~~i~I~~~~~~~~~~s~-~~l~~~-------------~l~P~~~~~l~elf~~Gy~d 378 (398)
++|+..+.+...+.. .|++++||+..+-. +...++ ++..++.+.+++++..|+++
T Consensus 210 ~iPv~~l~~~~nvn~-----------~Ivsq~np~~~pf~q~~~gditI~P~~~~~~~~~~l~~p~~~~~~~~~~~G~r~ 278 (298)
T cd07206 210 DLPAKRLARLYNVNH-----------FIVSQTNPHVVPFLQEYSGDITIIPPFSFSNPLKLLSNPSEDELQRLILEGERA 278 (298)
T ss_pred chHHHHHHHHcCCCe-----------EEEEcccCcccceeeeccCcEEEeeCccHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 999988744444433 35677777543211 111222 23345678999999999999
Q ss_pred HHHHHHh
Q 015942 379 AAVWAEN 385 (398)
Q Consensus 379 A~~~l~~ 385 (398)
+--.+..
T Consensus 279 twp~l~~ 285 (298)
T cd07206 279 TWPKIEM 285 (298)
T ss_pred HhHhHHH
Confidence 8766653
No 13
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=100.00 E-value=6.3e-40 Score=320.30 Aligned_cols=248 Identities=21% Similarity=0.223 Sum_probs=199.6
Q ss_pred ccccccccccCCCC-CcceecccCCCChhhHHHHHHhhhhcc------CCCCccHHHhhhhhHHhhhhccCCCcEEEEcC
Q 015942 88 NGSNRLAANNFETI-PLIERSEKLGSSGEDYKERIGAVMEDE------IEPEVIWEQRVRDIEAEKERRVVTTPGFSFSA 160 (398)
Q Consensus 88 ~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~ee~i~~v~~~~------~~~~~~~~~k~~~~~a~~~~~~~~~~aLvLsG 160 (398)
|++.. |||||+ +.+||.. |.|||.+||+||+||.++. +.++++.++|++||+ ++++++|+++|+|+|
T Consensus 2 r~~l~---rn~g~i~~~~L~~~-~~GTK~lIe~Yi~ev~~~L~~l~~~~~~~~~~~~kl~ff~--~~r~~~G~~aLvlsG 75 (323)
T cd07231 2 RADLV---RNLGNMCNPELHKG-RLEVPRLIRDYIAEVKAQLRAVVESDEDELSLEEKLAFFQ--ETRHAFGRTALLLSG 75 (323)
T ss_pred cchhh---ccccccCCHHHHHh-hcCcHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHH--HHHHhcCCEEEEEcC
Confidence 45544 999998 7778777 9999999999999999873 557889999999999 999999999999999
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHh
Q 015942 161 AGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRRGTAFRLGAVLRDILQKF 240 (398)
Q Consensus 161 GG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~g~~~~~~~~l~~~L~~~ 240 (398)
||++|+||+||+++|.|+|++ +++|+|+|+||++|++++++. .+|+.+++ ++.
T Consensus 76 Gg~~g~~h~GVlkaL~e~gl~--p~~i~GsSaGAivaa~~~~~t-~~El~~~~------------------------~~~ 128 (323)
T cd07231 76 GAALGTFHVGVVRTLVEHQLL--PRVIAGSSVGSIVCAIIATRT-DEELQSFF------------------------RAL 128 (323)
T ss_pred cHHHHHHHHHHHHHHHHcCCC--CCEEEEECHHHHHHHHHHcCC-HHHHHHHH------------------------HHH
Confidence 999999999999999999999 478999999999999999865 46665543 677
Q ss_pred CCCchhhhc---CCc-EEEEEEeccCCCceeEEeccCChhhHH-HHHHHhcccccccCCcccc---------eeC-----
Q 015942 241 LPDDVHTRS---SGR-VRVAVTQILWRPRGLLVDQFDSKEDLI-NAVLTSSFIPGYLAPRPAT---------MFR----- 301 (398)
Q Consensus 241 l~~~~~e~~---~~r-L~I~aT~l~~~~~~~l~~~f~s~~~Li-dAV~AS~aiP~~f~pv~~~---------~~~----- 301 (398)
+|+.+|+++ +++ ++|++++......+.++|++++++.++ +||+||||+|++|+|+.++ .+.
T Consensus 129 ~gd~TF~Eay~~tgr~lnI~v~~~~~~~~~~lln~~T~Pnv~I~sAv~aS~a~P~if~~~~L~~Kd~~G~ivp~~~~~~~ 208 (323)
T cd07231 129 LGDLTFQEAYDRTGRILGITVCPPRKSEPPRLLNYLTSPHVVIWSAVAASCAFPGLFEAQELMAKDRFGEIVPYHPPGKV 208 (323)
T ss_pred cCcccHHHHHhccCCEEEEEEecccCCCCceeeccCCCCCcHHHHHHHHHcCChhhccceeEEEECCCCCEeeccCCCcc
Confidence 899999876 444 999999987666788999999998665 9999999999999999632 122
Q ss_pred --CeEEEeccccCCCCchhhccceeecCCchhhcccccceecCCCCCCCcchh--------ccccce-------------
Q 015942 302 --NRLCIDGGLTLFMPPTSASNTIRVCAFPASALRLQGIGISPDCNPENRASR--------RELFNW------------- 358 (398)
Q Consensus 302 --G~~yvDGGl~~n~P~~~~~~ti~v~~f~~~~lg~~~i~I~~~~~~~~~~s~--------~~l~~~------------- 358 (398)
++.|+||++.+++|+..+.+..+|.+| |.+++||+..+-. +..-++
T Consensus 209 ~~~~~~~DGs~~~dlP~~rL~elfnVN~f-----------IVSQ~nPhv~Pfl~~~~~~~Q~~~GditI~P~~~~~~~~~ 277 (323)
T cd07231 209 SSPRRWRDGSLEQDLPMQQLRELFNVNHF-----------IVSQANPHIVPLLRLKKLFAQEWEGDITIVMPITWKQLLK 277 (323)
T ss_pred ccccccccCcccccCchHHHHHhcCCCce-----------EEEcCCceehHHhcchhheecccCCceEEccCccHHHHHH
Confidence 357999999999999988666666665 4556666532210 000122
Q ss_pred EEccCCHHHHHHHHHHHHHHH
Q 015942 359 ALEPAEDQILDKLFEFGYLDA 379 (398)
Q Consensus 359 ~l~P~~~~~l~elf~~Gy~dA 379 (398)
++..|..+.+.+++..|.+.+
T Consensus 278 il~nPt~~~l~~~i~~Ger~t 298 (323)
T cd07231 278 IIQNPTPEELRKAAMAGERCT 298 (323)
T ss_pred HhcCCCHHHHHHHHHhchhhc
Confidence 334456788889999988774
No 14
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=307.36 Aligned_cols=253 Identities=19% Similarity=0.231 Sum_probs=215.6
Q ss_pred ccceeeeechhhHHHHHHHhccccccccccCCCC-CcceecccCCCChhhHHHHHHhhhhccC---CCCccHHHhhhhhH
Q 015942 68 KRSFAVVTGELFLGIASRLLNGSNRLAANNFETI-PLIERSEKLGSSGEDYKERIGAVMEDEI---EPEVIWEQRVRDIE 143 (398)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~ee~i~~v~~~~~---~~~~~~~~k~~~~~ 143 (398)
+.++++.+.|..+....-++|+... |||||. +++||.++++|||.+||||+.|+..+.+ .++.+.++|+.||+
T Consensus 90 t~~lr~~r~~~~~~~~l~~~r~~~v---Rn~gNmgn~~Ly~~s~~GTK~lIdey~~e~~~~L~~l~~~~ls~~~k~~ff~ 166 (543)
T KOG2214|consen 90 TSELRHRRQEKSYRDLLYLLRTSLV---RNFGNMGNSNLYTHSHSGTKELIDEYLTEVLMVLDSLNTSDLSLDEKLGFFQ 166 (543)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHH---HhhcCCCchhhhhhcccchHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHH
Confidence 4567888999999999999999866 999997 8999999999999999999999988743 36788999999999
Q ss_pred HhhhhccCCCcEEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHH-------
Q 015942 144 AEKERRVVTTPGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTL------- 216 (398)
Q Consensus 144 a~~~~~~~~~~aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~------- 216 (398)
++++++|++||+|||||.+|+||+||+++|.+++++| .+|+|+|+||++|+++++... +|+..++...
T Consensus 167 --~~r~~~GrTAL~LsGG~tFGlfH~GVlrtL~e~dLlP--~IIsGsS~GaivAsl~~v~~~-eEl~~Ll~~~~~~~~~i 241 (543)
T KOG2214|consen 167 --RTRHNFGRTALILSGGATFGLFHIGVLRTLLEQDLLP--NIISGSSAGAIVASLVGVRSN-EELKQLLTNFLHSLFNI 241 (543)
T ss_pred --HHHHhhCceEEEecCCchhhhhHHHHHHHHHHccccc--hhhcCCchhHHHHHHHhhcch-HHHHHHhccchHhhhhh
Confidence 9999999999999999999999999999999999996 589999999999999999765 6666654322
Q ss_pred -----------HHHHHhcCCcccchHHHHHHHHHhCCCchhhhc---CCc-EEEEEEeccCCCceeEEeccCChhhHH-H
Q 015942 217 -----------AENCRRRGTAFRLGAVLRDILQKFLPDDVHTRS---SGR-VRVAVTQILWRPRGLLVDQFDSKEDLI-N 280 (398)
Q Consensus 217 -----------~~~~~~~g~~~~~~~~l~~~L~~~l~~~~~e~~---~~r-L~I~aT~l~~~~~~~l~~~f~s~~~Li-d 280 (398)
.+.+...|..++ ...+..++.+++++.+|+++ +|| ++|++.+..-.+.|.++|++++|+.|| .
T Consensus 242 f~dd~~n~~~~ikr~~~~G~~~D-i~~l~~~~~~~~~~lTFqEAY~rTGrIlNItV~p~s~~e~P~lLNylTaPnVLIWS 320 (543)
T KOG2214|consen 242 FQDDLGNLLTIIKRYFTQGALFD-ISHLACVMKKRLGNLTFQEAYDRTGRILNIVVPPSSKSEPPRLLNYLTAPNVLIWS 320 (543)
T ss_pred hcCcchhHHHHHHHHHhcchHHH-HHHHHHHHHHHhcchhHHHHHHhhCceEEEEECccccCCChhHhhccCCCceehhH
Confidence 123334566666 67888999999999999765 677 999998877667888999999998776 9
Q ss_pred HHHHhcccccccCCcccce-------------eCCeEEEeccccCCCCchhhccceeecCCc
Q 015942 281 AVLTSSFIPGYLAPRPATM-------------FRNRLCIDGGLTLFMPPTSASNTIRVCAFP 329 (398)
Q Consensus 281 AV~AS~aiP~~f~pv~~~~-------------~~G~~yvDGGl~~n~P~~~~~~ti~v~~f~ 329 (398)
||.|||++|++|++.+++. +...++.||.+-+.+|...+....+|.+|.
T Consensus 321 AV~aScs~pgif~~~~Ll~Kd~t~ei~p~~~~~~~~r~~dgsl~~d~P~srL~ElFNVnhfI 382 (543)
T KOG2214|consen 321 AVCASCSVPGIFESTPLLAKDLTNEIEPFIVTFSEPRFMDGSLDNDLPYSRLKELFNVNHFI 382 (543)
T ss_pred HHHHhcccccccCccHHHHhhccCcEeeccCCccchhhccCcccccCcHHHHHHHhccccEE
Confidence 9999999999999987621 134479999999999999987777887764
No 15
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=100.00 E-value=2.9e-34 Score=282.99 Aligned_cols=160 Identities=21% Similarity=0.226 Sum_probs=137.9
Q ss_pred CCCcEEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHH----HHh----
Q 015942 151 VTTPGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAEN----CRR---- 222 (398)
Q Consensus 151 ~~~~aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~----~~~---- 222 (398)
..+++|||+|||+||++|+||+++|+|+|+. +|.|+|||+||++|++|++|.+++++.+....+... ++.
T Consensus 13 ~~~~gLvL~GGG~RG~ahiGvL~aLee~gi~--~d~v~GtSaGAi~ga~ya~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (306)
T cd07225 13 GNSIALVLGGGGARGCAHIGVIKALEEAGIP--VDMVGGTSIGAFIGALYAEERNISRMKQRAREWAKDMTSIWKKLLDL 90 (306)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHHHHcCCC--CCEEEEECHHHHHHHHHHcCCCHHHHHHHHHHHHHHhHHHHHHHhcc
Confidence 5689999999999999999999999999997 799999999999999999999988887776654321 111
Q ss_pred ---cCCcccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccce
Q 015942 223 ---RGTAFRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATM 299 (398)
Q Consensus 223 ---~g~~~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~ 299 (398)
..+.++ ++.+++.+++++++..++++..++.+++||+. +++.+++ +++++++||+||||+|++|+|+.. .
T Consensus 91 ~~~~~~~~~-~~~~~~~l~~~~~~~~~edl~~p~~~vatdl~-tg~~~~~----~~g~l~~avrAS~siP~~f~Pv~~-~ 163 (306)
T cd07225 91 TYPITSMFS-GAAFNRSIHSIFGDKQIEDLWLPYFTITTDIT-ASAMRVH----TDGSLWRYVRASMSLSGYLPPLCD-P 163 (306)
T ss_pred cccccccCC-hHHHHHHHHHHhCCCCHHHcCCCeEEEeeecC-CCCEEEe----cCCCHHHHHHHHhcCCeeccceEe-C
Confidence 112344 78999999999999999999999999999998 7887653 567999999999999999999832 2
Q ss_pred eCCeEEEeccccCCCCchhh
Q 015942 300 FRNRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 300 ~~G~~yvDGGl~~n~P~~~~ 319 (398)
++|+.|+|||+.+|+|+..+
T Consensus 164 ~~g~~~vDGGv~~n~Pv~~a 183 (306)
T cd07225 164 KDGHLLMDGGYINNLPADVA 183 (306)
T ss_pred CCCeEEEeccccCcchHHHH
Confidence 78999999999999999876
No 16
>PRK10279 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=283.52 Aligned_cols=157 Identities=22% Similarity=0.291 Sum_probs=133.7
Q ss_pred CCCcEEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHH--HHHH------h
Q 015942 151 VTTPGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLA--ENCR------R 222 (398)
Q Consensus 151 ~~~~aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~--~~~~------~ 222 (398)
.++++|||+|||+||+||+||+++|+|+|+. +|.|+|||+||++|++||+|.. +++.+.+..+. +... .
T Consensus 3 ~~~igLvL~GGGarG~ahiGVL~aL~E~gi~--~d~i~GtS~GAlvga~yA~g~~-~~l~~~~~~~~~~~~~~~~d~~~~ 79 (300)
T PRK10279 3 KIKIGLALGSGAARGWSHIGVINALKKVGIE--IDIVAGCSIGSLVGAAYACDRL-SALEDWVTSFSYWDVLRLMDLSWQ 79 (300)
T ss_pred CCcEEEEEcCcHHHHHHHHHHHHHHHHcCCC--cCEEEEEcHHHHHHHHHHcCCh-HHHHHHHhccchhhhhhhhccCCC
Confidence 3679999999999999999999999999997 7999999999999999999984 55555443321 1111 1
Q ss_pred cCCcccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccceeCC
Q 015942 223 RGTAFRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMFRN 302 (398)
Q Consensus 223 ~g~~~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~~G 302 (398)
..+.++ ++.+.+++++.++...|++++.++.|++|++. +++.+++ +.+++.+||+||||+|++|+|+ .++|
T Consensus 80 ~~gl~~-~~~~~~~l~~~~~~~~~e~l~~~~~ivAtdl~-tg~~v~~----~~g~l~~avrAS~aiP~vf~Pv---~~~g 150 (300)
T PRK10279 80 RGGLLR-GERVFNQYREIMPETEIENCSRRFGAVATNLS-TGRELWF----TEGDLHLAIRASCSMPGLMAPV---AHNG 150 (300)
T ss_pred cCcccC-cHHHHHHHHHHcChhhHHhCCCCEEEEEEECC-CCCEEEe----cCCCHHHHHHHhcccccCCCCE---EECC
Confidence 123334 78899999999999999999999999999998 8887764 5678999999999999999999 8999
Q ss_pred eEEEeccccCCCCchhh
Q 015942 303 RLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 303 ~~yvDGGl~~n~P~~~~ 319 (398)
+.|+|||+++|+|+..+
T Consensus 151 ~~~vDGGv~~~~Pv~~a 167 (300)
T PRK10279 151 YWLVDGAVVNPVPVSLT 167 (300)
T ss_pred EEEEECccCccccHHHH
Confidence 99999999999999876
No 17
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=100.00 E-value=5.1e-32 Score=245.50 Aligned_cols=164 Identities=39% Similarity=0.566 Sum_probs=134.5
Q ss_pred EEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc--CCccc----c
Q 015942 156 FSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRR--GTAFR----L 229 (398)
Q Consensus 156 LvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~--g~~~~----~ 229 (398)
|||+|||+||+||+||+++|+|+|+. +|.|+|||+||++|+++++|.+.+++.....++....+.. ..... .
T Consensus 1 Lvl~GGG~rG~~~~Gvl~aL~e~gi~--~d~v~GtSaGAi~aa~~a~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (172)
T cd07198 1 LVLSGGGALGIYHVGVAKALRERGPL--IDIIAGTSAGAIVAALLASGRDLEEALLLLLRLSREVRLRFDGAFPPTGRLL 78 (172)
T ss_pred CEECCcHHHHHHHHHHHHHHHHcCCC--CCEEEEECHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhccCCcCcccchh
Confidence 79999999999999999999999998 7999999999999999999999888887765444332211 11111 1
Q ss_pred hHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCccccee--CCeEEEe
Q 015942 230 GAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMF--RNRLCID 307 (398)
Q Consensus 230 ~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~--~G~~yvD 307 (398)
+..+... .+.++.+.+++.+.++.|++|++. +++.+++.. ++++++++||+||||+|++|+|+ .+ +|+.|+|
T Consensus 79 ~~~~~~~-~~~~~~~~~~~~~~~~~i~at~l~-tg~~~~~~~-~~~~~l~~av~AS~aiP~~f~p~---~~~~~g~~~vD 152 (172)
T cd07198 79 GILRQPL-LSALPDDAHEDASGKLFISLTRLT-DGENVLVSD-TSKGELWSAVRASSSIPGYFGPV---PLSFRGRRYGD 152 (172)
T ss_pred HHHHHHH-HHhccHhHHHHCCCCEEEEEEECC-CCCEEEEeC-CCcchHHHHHHHHcchhhhcCce---eecCCCeEEEe
Confidence 2223333 345667788899999999999998 888887766 67889999999999999999999 66 9999999
Q ss_pred ccccCCCCchhhccceeecC
Q 015942 308 GGLTLFMPPTSASNTIRVCA 327 (398)
Q Consensus 308 GGl~~n~P~~~~~~ti~v~~ 327 (398)
||+.+|+|+..+.++++||+
T Consensus 153 GGv~~n~Pv~~~~~~~~v~~ 172 (172)
T cd07198 153 GGLSNNLPVAELGNTINVSP 172 (172)
T ss_pred CCcccCCCCccccceEEeCc
Confidence 99999999999888888874
No 18
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=99.98 E-value=1.2e-31 Score=243.81 Aligned_cols=155 Identities=24% Similarity=0.294 Sum_probs=131.3
Q ss_pred cEEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHH---H----hcCCc
Q 015942 154 PGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENC---R----RRGTA 226 (398)
Q Consensus 154 ~aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~---~----~~g~~ 226 (398)
++|||+|||+||+||+||+++|+|+|+. +|.|+|||+||++|+++++|.+.+++........... . ...+.
T Consensus 1 ~~LvL~GGG~rG~~~~Gvl~~L~e~g~~--~d~i~GtSaGAi~aa~~a~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (175)
T cd07228 1 IGLALGSGGARGWAHIGVLRALEEEGIE--IDIIAGSSIGALVGALYAAGHLDALEEWVRSLSQRDVLRLLDLSASRSGL 78 (175)
T ss_pred CEEEecCcHHHHHHHHHHHHHHHHCCCC--eeEEEEeCHHHHHHHHHHcCCCHHHHHHHHhhhHHHHHhhcccCCCcccc
Confidence 5899999999999999999999999986 7999999999999999999998776654321111111 1 12233
Q ss_pred ccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccceeCCeEEE
Q 015942 227 FRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMFRNRLCI 306 (398)
Q Consensus 227 ~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~~G~~yv 306 (398)
++ .+.+++.+++.+++.+++++..++.|++|++. +++++++ +.+++++||+||||+|++|+|+ .++|+.|+
T Consensus 79 ~~-~~~l~~~l~~~~~~~~~~~~~~~l~i~at~~~-tg~~~~f----~~~~l~~av~AS~a~P~~f~p~---~~~g~~~v 149 (175)
T cd07228 79 LK-GEKVLEYLREIMGGVTIEELPIPFAAVATDLQ-TGKEVWF----REGSLIDAIRASISIPGIFAPV---EHNGRLLV 149 (175)
T ss_pred cC-HHHHHHHHHHHcCCCCHHHCCCCEEEEEEECC-CCCEEEE----CCCCHHHHHHHHcccCccccCE---EECCEEEE
Confidence 44 78899999999999999999999999999998 7887765 3567999999999999999999 89999999
Q ss_pred eccccCCCCchhh
Q 015942 307 DGGLTLFMPPTSA 319 (398)
Q Consensus 307 DGGl~~n~P~~~~ 319 (398)
|||+.+|+|+..+
T Consensus 150 DGG~~~~~P~~~a 162 (175)
T cd07228 150 DGGVVNPIPVSVA 162 (175)
T ss_pred eccCcCCCcHHHH
Confidence 9999999999876
No 19
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=99.97 E-value=1.3e-31 Score=259.41 Aligned_cols=159 Identities=19% Similarity=0.175 Sum_probs=134.9
Q ss_pred CCCcEEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHH----HHhc---
Q 015942 151 VTTPGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAEN----CRRR--- 223 (398)
Q Consensus 151 ~~~~aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~----~~~~--- 223 (398)
..+++|||+|||+||+||+||+++|+|+|+. +|.|+||||||++|++|++|.+..++....+.+... ++..
T Consensus 8 g~~igLVL~GGGaRG~ahiGVL~aLeE~gi~--~d~v~GtSaGAiiga~ya~g~~~~~~~~r~~~~~~~~~~~~~~l~d~ 85 (269)
T cd07227 8 GQAIGLVLGGGGARGISHIGILQALEEAGIP--IDAIGGTSIGSFVGGLYAREADLVPIFGRAKKFAGRMASMWRFLSDV 85 (269)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHHHHHcCCC--ccEEEEECHHHHHHHHHHcCCchHHHHHHHHHHHHHHhHHHHHHhhc
Confidence 4679999999999999999999999999998 899999999999999999999988877655443211 1110
Q ss_pred ---CCcccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCccccee
Q 015942 224 ---GTAFRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMF 300 (398)
Q Consensus 224 ---g~~~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~ 300 (398)
...+..+..+.+.+.+.+++..++++..++++++||+. +++.+++ +.+++++||+||||+|++|+|+ .+
T Consensus 86 ~~p~~~~~~g~~~~~~l~~~~~~~~iedl~~pf~~~aTdl~-tg~~~~~----~~g~l~~avrAS~slPg~~pPv---~~ 157 (269)
T cd07227 86 TYPFASYTTGHEFNRGIWKTFGNTHIEDFWIPFYANSTNIT-HSRMEIH----SSGYAWRYIRASMSLAGLLPPL---SD 157 (269)
T ss_pred ccccccccchhHHHHHHHHHcCcCCHHHCCCCEEEEEEECC-CCCEEEe----cCCCHHHHHHHHccchhcCCCE---EE
Confidence 11223366777888999999999999999999999998 7776653 5788999999999999999999 89
Q ss_pred CCeEEEeccccCCCCchhh
Q 015942 301 RNRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 301 ~G~~yvDGGl~~n~P~~~~ 319 (398)
+|+.|+|||+.+|+|+..+
T Consensus 158 ~G~~~vDGGv~dnlPv~~~ 176 (269)
T cd07227 158 NGSMLLDGGYMDNLPVSPM 176 (269)
T ss_pred CCEEEEcccCCccHhHHHH
Confidence 9999999999999999876
No 20
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=99.97 E-value=2.9e-31 Score=240.66 Aligned_cols=156 Identities=24% Similarity=0.309 Sum_probs=134.9
Q ss_pred cEEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHh------cCCcc
Q 015942 154 PGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRR------RGTAF 227 (398)
Q Consensus 154 ~aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~------~g~~~ 227 (398)
++|||+|||+||+||+||+++|+++|+. +|.|+|||+||++|+++++|.+++++++.+......++. ....+
T Consensus 1 ~~Lvl~GGG~rG~~~~Gvl~~L~~~~~~--~d~i~GtSaGal~a~~~a~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (175)
T cd07205 1 IGLALSGGGARGLAHIGVLKALEEAGIP--IDIVSGTSAGAIVGALYAAGYSPEEIEERAKLRSTDLKALSDLTIPTAGL 78 (175)
T ss_pred CeEEEeChhHHHHHHHHHHHHHHHcCCC--eeEEEEECHHHHHHHHHHcCCCHHHHHHHHHhhccchhhhhccccccccc
Confidence 5899999999999999999999999986 799999999999999999999999988877644322211 11223
Q ss_pred cchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccceeCCeEEEe
Q 015942 228 RLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMFRNRLCID 307 (398)
Q Consensus 228 ~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~~G~~yvD 307 (398)
...+.+++++++.++..++++...++.|++|++. +++++++ +..++++|++||||+|++|+|+ +++|+.|+|
T Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~~~~l~i~a~~l~-~g~~~~f----~~~~l~~av~AS~a~P~~f~pv---~~~g~~~~D 150 (175)
T cd07205 79 LRGDKFLELLDEYFGDRDIEDLWIPFFIVATDLT-SGKLVVF----RSGSLVRAVRASMSIPGIFPPV---KIDGQLLVD 150 (175)
T ss_pred cChHHHHHHHHHHcCCCcHHHCCCCEEEEEEECC-CCCEEEE----cCCCHHHHHHHHcccccccCCE---EECCEEEEe
Confidence 3378899999999999999999999999999998 7777664 4568999999999999999999 899999999
Q ss_pred ccccCCCCchhh
Q 015942 308 GGLTLFMPPTSA 319 (398)
Q Consensus 308 GGl~~n~P~~~~ 319 (398)
||+.+|+|+..+
T Consensus 151 GG~~~n~P~~~a 162 (175)
T cd07205 151 GGVLNNLPVDVL 162 (175)
T ss_pred ccCcCCccHHHH
Confidence 999999999876
No 21
>KOG3773 consensus Adiponutrin and related vesicular transport proteins; predicted alpha/beta hydrolase [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=6.1e-32 Score=261.48 Aligned_cols=230 Identities=33% Similarity=0.544 Sum_probs=198.8
Q ss_pred CCCcEEEEcCCcchHHHHHHHHHHHHHcC--CCCCCCc-EEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc----
Q 015942 151 VTTPGFSFSAAGLLFPYHLGVAQLLIEKG--YIKETTP-LAGSSAGAIACAVIASGASMQEALNATKTLAENCRRR---- 223 (398)
Q Consensus 151 ~~~~aLvLsGGG~rG~~hiGVlkaL~e~g--l~~~~d~-IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~---- 223 (398)
.++.+|+|+|.|++|+||+|+..+|.++. ++. +. |+|+|+|+++|+.+.++.+.+++...+..+....+.+
T Consensus 4 ~~r~~lSfsg~gFlg~yh~gaa~~l~~~ap~ll~--~~~~~GaSagsl~a~~ll~~~~l~~a~~~l~~~v~e~~~~s~g~ 81 (354)
T KOG3773|consen 4 VERMNLSFSGCGFLGIYHVGAANCLPRHAPRLLK--DRSIAGASAGSLVACDLLCGLSLEEATGELYKMVDEARRKSLGA 81 (354)
T ss_pred hhhhheeecCCceeEEEecchHHHHHHHHHHHhc--cccccCcccchHHHhhhhccccHHHHHHHHHHHHHHHHHhhcCC
Confidence 35688999999999999999999999986 443 44 9999999999999999999998888887777665543
Q ss_pred -CCcccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccceeCC
Q 015942 224 -GTAFRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMFRN 302 (398)
Q Consensus 224 -g~~~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~~G 302 (398)
.+.|++++.+++.|++.+|++.++..++|++|+.|.+. ++++++++.|.+..+|++|++|||.||.|.+-.+. .++|
T Consensus 82 ~tP~f~~~~~l~~~le~~LPpda~~la~~rl~iSlTr~~-~~~N~lis~F~s~~~liq~L~~scyiP~ysg~~pp-~~rg 159 (354)
T KOG3773|consen 82 FTPGFNLSDRLRSGLEDFLPPDAHWLASGRLHISLTRVK-DRENVLISEFPSRDELIQALMCSCYIPMYSGLKPP-IFRG 159 (354)
T ss_pred CCCCcCHHHHHHHHHHHhCChHHHHHhhcceeEEEEeee-ehhhhhhhccccHHHHHHHHHHhccCccccCCCCc-ceee
Confidence 37889999999999999999999999999999999998 88999999999999999999999999999876654 7999
Q ss_pred eEEEeccccCCCCchhhccceeecCCchhhcccccceecCCCCCCC-----------cchhccc--cceEEccCCHHHHH
Q 015942 303 RLCIDGGLTLFMPPTSASNTIRVCAFPASALRLQGIGISPDCNPEN-----------RASRREL--FNWALEPAEDQILD 369 (398)
Q Consensus 303 ~~yvDGGl~~n~P~~~~~~ti~v~~f~~~~lg~~~i~I~~~~~~~~-----------~~s~~~l--~~~~l~P~~~~~l~ 369 (398)
+.|+|||+++|+|..+...||+|+||.|+ .+|||+..+.+ ..+.+++ +..+++||....++
T Consensus 160 ~~yiDGg~snnlP~~~~~~TvTvSpF~g~------~DIcP~d~S~~~l~~~~~~~~irls~rNl~r~~~~l~PP~~~~l~ 233 (354)
T KOG3773|consen 160 VRYIDGGTSNNLPEADEELTVTVSPFSGE------SDICPVDKSMLLLLVNFANQSIRLSTRNLVRLTRALFPPRRLILD 233 (354)
T ss_pred EEEecccccccccccCccceEEeCCCCCc------cccCCCCCchhhhcccccceeeeechhHHHHhhhhccCCcHHHHH
Confidence 99999999999999998889999999975 46888876421 1122222 34588999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCcc
Q 015942 370 KLFEFGYLDAAVWAENNPIEK 390 (398)
Q Consensus 370 elf~~Gy~dA~~~l~~~~~~~ 390 (398)
+++++||.||.+|++++++..
T Consensus 234 ~~~~~G~~Da~~Fl~~~~~~~ 254 (354)
T KOG3773|consen 234 QFCQQGFLDALRFLKKNGLGP 254 (354)
T ss_pred HHHhcchhHHHHHHHhcCCCC
Confidence 999999999999999998653
No 22
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=99.97 E-value=5.1e-31 Score=248.83 Aligned_cols=155 Identities=28% Similarity=0.378 Sum_probs=135.2
Q ss_pred cEEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHH-H------HhcCCc
Q 015942 154 PGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAEN-C------RRRGTA 226 (398)
Q Consensus 154 ~aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~-~------~~~g~~ 226 (398)
.+|||+|||+||+||+||+++|+|+|+. ++.|+|||+||++|+++++|.+.+++.+.+...... + ...++.
T Consensus 1 ~~LvL~GGG~rG~~~~GvL~aL~e~gi~--~~~i~GtSaGAi~aa~~a~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (221)
T cd07210 1 FALVLSSGFFGFYAHLGFLAALLEMGLE--PSAISGTSAGALVGGLFASGISPDEMAELLLSLERKDFWMFWDPPLRGGL 78 (221)
T ss_pred CeEEEcChHHHHHHHHHHHHHHHHcCCC--ceEEEEeCHHHHHHHHHHcCCCHHHHHHHHHhcCHHHHhhhccccCCccc
Confidence 4899999999999999999999999986 689999999999999999999999988877654321 1 112234
Q ss_pred ccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccceeCCeEEE
Q 015942 227 FRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMFRNRLCI 306 (398)
Q Consensus 227 ~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~~G~~yv 306 (398)
++ .+.+++++++.+++.+|+++..++.|++|++. +++.+++ +.+++++||+||||+|++|+|+ .++|+.|+
T Consensus 79 ~~-~~~l~~~l~~~l~~~~~~~~~~~l~i~atdl~-tg~~~~f----~~~~l~~av~AS~aiP~~f~Pv---~i~g~~~v 149 (221)
T cd07210 79 LS-GDRFAALLREHLPPDRFEELRIPLAVSVVDLT-SRETLLL----SEGDLAEAVAASCAVPPLFQPV---EIGGRPFV 149 (221)
T ss_pred cC-hHHHHHHHHHHcCCCCHHHCCCCeEEEEEECC-CCCEEEE----CCCCHHHHHHHHcccccccCCE---EECCEEEE
Confidence 44 78999999999999999999999999999998 7776654 4568999999999999999999 89999999
Q ss_pred eccccCCCCchhh
Q 015942 307 DGGLTLFMPPTSA 319 (398)
Q Consensus 307 DGGl~~n~P~~~~ 319 (398)
|||+.+|+|+..+
T Consensus 150 DGGv~~n~Pi~~~ 162 (221)
T cd07210 150 DGGVADRLPFDAL 162 (221)
T ss_pred eccccccccHHHH
Confidence 9999999999877
No 23
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=99.97 E-value=9.6e-31 Score=240.28 Aligned_cols=157 Identities=22% Similarity=0.286 Sum_probs=130.3
Q ss_pred EEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHH---------------H
Q 015942 156 FSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAEN---------------C 220 (398)
Q Consensus 156 LvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~---------------~ 220 (398)
|||+|||+||+||+||+++|+|+|+. +|.|+|||+||++|+++++|.+.+++.+.+..+... +
T Consensus 2 Lvl~GGG~rG~~~~Gvl~~L~e~~~~--~d~i~GtSaGai~aa~~a~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (194)
T cd07207 2 LVFEGGGAKGIAYIGALKALEEAGIL--KKRVAGTSAGAITAALLALGYSAADIKDILKETDFAKLLDSPVGLLFLLPSL 79 (194)
T ss_pred eEEcCchHHHHHHHHHHHHHHHcCCC--cceEEEECHHHHHHHHHHcCCCHHHHHHHHHhCCHHHHhccchhhhHHHHHH
Confidence 89999999999999999999999987 599999999999999999999998888877654211 1
Q ss_pred HhcCCcccchHHHHHHHHHhCCCchh------------hhcCCcEEEEEEeccCCCceeEEeccCChh-hHHHHHHHhcc
Q 015942 221 RRRGTAFRLGAVLRDILQKFLPDDVH------------TRSSGRVRVAVTQILWRPRGLLVDQFDSKE-DLINAVLTSSF 287 (398)
Q Consensus 221 ~~~g~~~~~~~~l~~~L~~~l~~~~~------------e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~-~LidAV~AS~a 287 (398)
...++.++ ++.+++++++.+++..+ ++...++.|++|++. ++++++++..+.++ ++++||+||||
T Consensus 80 ~~~~~~~~-~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~I~atd~~-tg~~~~f~~~~~~~~~l~~av~AS~A 157 (194)
T cd07207 80 FKEGGLYK-GDALEEWLRELLKEKTGNSFATSLLRDLDDDLGKDLKVVATDLT-TGALVVFSAETTPDMPVAKAVRASMS 157 (194)
T ss_pred HhhcCCcc-HHHHHHHHHHHHHhccCCcccchhhhhhccccCCcEEEEEEECC-CCCEEEecCCCCCcccHHHHHHHHcC
Confidence 11223344 78888888887765544 455677999999998 78888877655554 78999999999
Q ss_pred cccccCCcccceeC-CeEEEeccccCCCCchhh
Q 015942 288 IPGYLAPRPATMFR-NRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 288 iP~~f~pv~~~~~~-G~~yvDGGl~~n~P~~~~ 319 (398)
+|++|+|+ .++ |+.|+|||+.+|+|+...
T Consensus 158 iP~~f~pv---~i~~g~~~vDGG~~~n~Pv~~~ 187 (194)
T cd07207 158 IPFVFKPV---RLAKGDVYVDGGVLDNYPVWLF 187 (194)
T ss_pred CCcccccE---EeCCCeEEEeCccccCCCchhc
Confidence 99999999 788 999999999999999754
No 24
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=99.97 E-value=3.5e-30 Score=241.98 Aligned_cols=147 Identities=25% Similarity=0.349 Sum_probs=124.1
Q ss_pred EEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCC--HHHHHHHHHHHHHHHHhcCCcccchHHH
Q 015942 156 FSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGAS--MQEALNATKTLAENCRRRGTAFRLGAVL 233 (398)
Q Consensus 156 LvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~--~~el~~~~~~~~~~~~~~g~~~~~~~~l 233 (398)
|||+|||+||+||+||+++|+|+|+. +|.|+|||+||++|+++++|.+ .+++.+++.++...- -.+
T Consensus 1 LvL~GGG~rG~~~~Gvl~aL~e~g~~--~d~i~GtS~GAl~aa~~a~~~~~~~~~l~~~~~~~~~~~----------~~l 68 (215)
T cd07209 1 LVLSGGGALGAYQAGVLKALAEAGIE--PDIISGTSIGAINGALIAGGDPEAVERLEKLWRELSRED----------VFL 68 (215)
T ss_pred CEecccHHHHHHHHHHHHHHHHcCCC--CCEEEEECHHHHHHHHHHcCCcHHHHHHHHHHHhCChhh----------HHH
Confidence 79999999999999999999999995 8999999999999999999998 555555544432210 117
Q ss_pred HHHHHHhCCCchhhhcCC---cEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccceeCCeEEEeccc
Q 015942 234 RDILQKFLPDDVHTRSSG---RVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMFRNRLCIDGGL 310 (398)
Q Consensus 234 ~~~L~~~l~~~~~e~~~~---rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~~G~~yvDGGl 310 (398)
++++++.++.+++++... ++.|++|++. ++++++++... ...+++||+||||+|++|+|+ .++|+.|+|||+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~l~i~at~~~-tg~~~~f~~~~-~~~~~~av~AS~aiP~~f~pv---~i~g~~yvDGGv 143 (215)
T cd07209 69 RGLLDRALDFDTLRLLAILFAGLVIVAVNVL-TGEPVYFDDIP-DGILPEHLLASAALPPFFPPV---EIDGRYYWDGGV 143 (215)
T ss_pred HHHHHHhCCHHHHhhccccCceEEEEEEEcC-CCCEEEEeCCC-cchHHHHHHHhccccccCCCE---EECCeEEEcCcc
Confidence 788888888888887765 4999999998 88888876553 356889999999999999999 899999999999
Q ss_pred cCCCCchhh
Q 015942 311 TLFMPPTSA 319 (398)
Q Consensus 311 ~~n~P~~~~ 319 (398)
.+|+|+..+
T Consensus 144 ~~n~Pv~~a 152 (215)
T cd07209 144 VDNTPLSPA 152 (215)
T ss_pred ccCcCHHHH
Confidence 999999876
No 25
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=99.97 E-value=2e-29 Score=243.39 Aligned_cols=158 Identities=27% Similarity=0.323 Sum_probs=124.5
Q ss_pred EEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHH-------HHHHhcCCccc
Q 015942 156 FSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLA-------ENCRRRGTAFR 228 (398)
Q Consensus 156 LvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~-------~~~~~~g~~~~ 228 (398)
|||+|||+||+||+|||++|+|+|+. .+|.|+|||+||++|+++++|.+.+++........ ..+...++.++
T Consensus 1 Lvl~GGG~rG~~~~Gvl~al~e~~~~-~fd~i~GtSaGAi~a~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (266)
T cd07208 1 LVLEGGGMRGAYTAGVLDAFLEAGIR-PFDLVIGVSAGALNAASYLSGQRGRALRINTKYATDPRYLGLRSLLRTGNLFD 79 (266)
T ss_pred CeeccchhhHHHHHHHHHHHHHcCCC-CCCEEEEECHHHHhHHHHHhCCcchHHHHHHHhcCCCCccCHHHHhcCCCeec
Confidence 79999999999999999999999987 48999999999999999999987655432221110 11122233444
Q ss_pred chHHHHHHH---HHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccceeCCeEE
Q 015942 229 LGAVLRDIL---QKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMFRNRLC 305 (398)
Q Consensus 229 ~~~~l~~~L---~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~~G~~y 305 (398)
.+.+.+.+ ...++..++++...++.|++|++. ++++++++......++++||+||||+|++|+|+ .++|+.|
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~at~~~-~g~~~~~~~~~~~~~l~~av~AS~aiP~~f~pv---~i~g~~y 154 (266)
T cd07208 80 -LDFLYDELPDGLDPFDFEAFAASPARFYVVATDAD-TGEAVYFDKPDILDDLLDALRASSALPGLFPPV---RIDGEPY 154 (266)
T ss_pred -HHHHHhhccCccCCcCHHHHHhCCCcEEEEEEECC-CCCEEEEeCcCcchHHHHHHHHHhcchhhcCCE---EECCEEE
Confidence 45555554 344566677788889999999998 888887765544456889999999999999998 8999999
Q ss_pred EeccccCCCCchhh
Q 015942 306 IDGGLTLFMPPTSA 319 (398)
Q Consensus 306 vDGGl~~n~P~~~~ 319 (398)
+|||+.+|+|+..+
T Consensus 155 vDGGv~~~~P~~~a 168 (266)
T cd07208 155 VDGGLSDSIPVDKA 168 (266)
T ss_pred EcCccCcchhHHHH
Confidence 99999999999876
No 26
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=99.97 E-value=1.6e-29 Score=249.30 Aligned_cols=160 Identities=29% Similarity=0.370 Sum_probs=136.2
Q ss_pred cCCCcEEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH--------
Q 015942 150 VVTTPGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCR-------- 221 (398)
Q Consensus 150 ~~~~~aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~-------- 221 (398)
...+++|+|+|||++|+||+||+++|+|.|+. +++|+|||+||++|+++|+|++.+++......+...+.
T Consensus 8 ~~~~i~LvL~GGgArG~~hiGVl~aL~e~gi~--~~~iaGtS~GAiva~l~A~g~~~~~~~~~~~~l~~~~~~~~~~~~~ 85 (306)
T COG1752 8 AKLRIGLVLGGGGARGAAHIGVLKALEEAGIP--IDVIAGTSAGAIVAALYAAGMDEDELELAAQRLTARWDNARDLLRL 85 (306)
T ss_pred cCceEEEEecCcHHHHHHHHHHHHHHHHcCCC--ccEEEecCHHHHHHHHHHcCCChhHHHHHHHHHHhhhccccchhhc
Confidence 45679999999999999999999999999987 68999999999999999999988777766655543321
Q ss_pred -----hcC--CcccchHHHHHHHHHhCCCc--hhhhcCCc-EEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccc
Q 015942 222 -----RRG--TAFRLGAVLRDILQKFLPDD--VHTRSSGR-VRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGY 291 (398)
Q Consensus 222 -----~~g--~~~~~~~~l~~~L~~~l~~~--~~e~~~~r-L~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~ 291 (398)
... ..+..++.+.+.++.++++. .|+++..+ ++|++|++. +++.+++ +.+++++||+||||+|++
T Consensus 86 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~atd~~-~g~~~~~----~~g~~~~av~AS~siP~v 160 (306)
T COG1752 86 LDLTLPGGRPLGLLRGEKLRNLLRELLGDLLFDFEDLPIPLLYVVATDLL-TGREVVF----SEGSLAEAVRASCSIPGV 160 (306)
T ss_pred cchhhhccCccceecHHHHHHHHHHHhcccccCHHHcCCCcEEEEeeEcC-CCCEEEe----cCCcHHHHHHHhcccCcc
Confidence 011 13334789999999999999 99999999 999999998 7766554 345599999999999999
Q ss_pred cCCcccceeCCeEEEeccccCCCCchhh
Q 015942 292 LAPRPATMFRNRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 292 f~pv~~~~~~G~~yvDGGl~~n~P~~~~ 319 (398)
|+|+ .++|+.|+|||+.+|+|+..+
T Consensus 161 F~Pv---~i~~~~~vDGg~~~n~Pv~~~ 185 (306)
T COG1752 161 FPPV---EIDGRLLVDGGVLNNVPVSLL 185 (306)
T ss_pred CCCE---EECCEEEEecCccCCccHHHH
Confidence 9999 899999999999999999876
No 27
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=99.95 E-value=2.6e-27 Score=250.30 Aligned_cols=202 Identities=20% Similarity=0.162 Sum_probs=150.3
Q ss_pred CcceecccCCCChhhHHHHHHhhhhccCCCCccHHHhhhhhHHhhhhccCCCcEEEEcCCcchHHHHHHHHHHHHHcCCC
Q 015942 102 PLIERSEKLGSSGEDYKERIGAVMEDEIEPEVIWEQRVRDIEAEKERRVVTTPGFSFSAAGLLFPYHLGVAQLLIEKGYI 181 (398)
Q Consensus 102 ~~~~~~~~~~~t~~~~ee~i~~v~~~~~~~~~~~~~k~~~~~a~~~~~~~~~~aLvLsGGG~rG~~hiGVlkaL~e~gl~ 181 (398)
+.++|+++.---+ .+.|+.+.+...+..-..++.+-.+.+ ....+||||+|||+||++|+||++||+|+|+.
T Consensus 796 ~~r~fs~~~~~~~-~~~e~y~~~~~~~~~r~sDFsRLAR~L-------tGnaIgLVLGGGGARG~ahiGvl~ALeE~GIP 867 (1158)
T KOG2968|consen 796 PKREFSRNSKARE-NLVEYYEKVFCWEPDRHSDFSRLARIL-------TGNAIGLVLGGGGARGAAHIGVLQALEEAGIP 867 (1158)
T ss_pred chhhhccccchhh-hhhhhhheeeccCccccchHHHHHHHH-------hCCeEEEEecCcchhhhhHHHHHHHHHHcCCC
Confidence 3445554432222 255555555544333333333322222 24689999999999999999999999999998
Q ss_pred CCCCcEEeccHHHHHHHHHHcCCCHHHHHH----HHHHHHHHHHhc----C--CcccchHHHHHHHHHhCCCchhhhcCC
Q 015942 182 KETTPLAGSSAGAIACAVIASGASMQEALN----ATKTLAENCRRR----G--TAFRLGAVLRDILQKFLPDDVHTRSSG 251 (398)
Q Consensus 182 ~~~d~IaGTSaGAivAalla~g~~~~el~~----~~~~~~~~~~~~----g--~~~~~~~~l~~~L~~~l~~~~~e~~~~ 251 (398)
+|+|+|||+||+++++||...+...+.. +...+...|+.. . ..+..|..+...+.+.|+|..+|+++.
T Consensus 868 --vD~VGGTSIGafiGaLYA~e~d~~~v~~rak~f~~~mssiw~~llDLTyP~tsmftGh~FNrsI~~~Fgd~~IEDlWi 945 (1158)
T KOG2968|consen 868 --VDMVGGTSIGAFIGALYAEERDLVPVFGRAKKFAGKMSSIWRLLLDLTYPITSMFTGHEFNRSIHSTFGDVLIEDLWI 945 (1158)
T ss_pred --eeeeccccHHHhhhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhccccchhccchhhhhhHHHHHhcccchhhhhh
Confidence 8999999999999999998776544443 333444333321 1 234448999999999999999999999
Q ss_pred cEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccceeCCeEEEeccccCCCCchhh
Q 015942 252 RVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMFRNRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 252 rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~~G~~yvDGGl~~n~P~~~~ 319 (398)
++++.+||++ +... ..++.+.+|..|+||+++-||+||.+. ..+|+.++|||++||+|.+..
T Consensus 946 ~yfciTTdIt-~S~m----riH~~G~~WrYvRASMsLaGylPPlcd-p~dGhlLlDGGYvnNlPadvm 1007 (1158)
T KOG2968|consen 946 PYFCITTDIT-SSEM----RVHRNGSLWRYVRASMSLAGYLPPLCD-PKDGHLLLDGGYVNNLPADVM 1007 (1158)
T ss_pred eeeecccccc-hhhh----hhhcCCchHHHHHhhccccccCCCCCC-CCCCCEEecccccccCcHHHH
Confidence 9999999998 3221 356889999999999999999999975 358999999999999999765
No 28
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=99.92 E-value=7.8e-25 Score=216.68 Aligned_cols=156 Identities=19% Similarity=0.228 Sum_probs=127.5
Q ss_pred EEEcCCcchHHHHHHHHHHHHHc-CC--CCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCCcccchHH
Q 015942 156 FSFSAAGLLFPYHLGVAQLLIEK-GY--IKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRRGTAFRLGAV 232 (398)
Q Consensus 156 LvLsGGG~rG~~hiGVlkaL~e~-gl--~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~g~~~~~~~~ 232 (398)
|+|+|||+||++|+|||++|+++ |. ...||.|+|||+|||+|++++.|++++|+.+.+..+.+.++.....++ ...
T Consensus 2 LsLDGGG~RGl~~i~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~s~~e~~~~y~~~~~~iF~~~~~y~-~~~ 80 (312)
T cd07212 2 LCLDGGGIRGLVLIQMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGKSLREARRLYLRMKDRVFDGSRPYN-SEP 80 (312)
T ss_pred EEECCcHHHHHHHHHHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCCCHHHHHHHHHHhhhhhCCCCCCCC-ChH
Confidence 89999999999999999999997 64 345899999999999999999999999999999998887776655566 688
Q ss_pred HHHHHHHhCCCc-hhhhcCCcEEEEEEeccCC--CceeEEeccCC--------------------hhhHHHHHHHhcccc
Q 015942 233 LRDILQKFLPDD-VHTRSSGRVRVAVTQILWR--PRGLLVDQFDS--------------------KEDLINAVLTSSFIP 289 (398)
Q Consensus 233 l~~~L~~~l~~~-~~e~~~~rL~I~aT~l~~~--~~~~l~~~f~s--------------------~~~LidAV~AS~aiP 289 (398)
++++|++.+++. .+.+...+..++++..... ++.+++++|.. ...|++|++||+|+|
T Consensus 81 le~~L~~~~g~~~~l~d~~~p~~~v~~~~~~~~~~~~~~f~ny~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~rASsAaP 160 (312)
T cd07212 81 LEEFLKREFGEDTKMTDVKYPRLMVTGVLADRQPVQLHLFRNYDPPEDVEEPEKNANFLPPTDPAEQLLWRAARSSGAAP 160 (312)
T ss_pred HHHHHHHHHCcCccccccCCCeEEEEeEeccCCCcCceeeecCCCCCCchhccccccccccCCcccccHHHHHHhhcccc
Confidence 999999999987 6777777754545444311 23356665531 257899999999999
Q ss_pred cccCCcccceeCCeEEEeccccCCCCchhh
Q 015942 290 GYLAPRPATMFRNRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 290 ~~f~pv~~~~~~G~~yvDGGl~~n~P~~~~ 319 (398)
+||+|+ + .|+|||+.+|+|+..+
T Consensus 161 ~~F~p~------~-~~vDGGv~~NnP~~~a 183 (312)
T cd07212 161 TYFRPM------G-RFLDGGLIANNPTLDA 183 (312)
T ss_pred cccccc------c-ceecCceeccChHHHH
Confidence 999998 2 5999999999999655
No 29
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=99.92 E-value=2.5e-24 Score=212.42 Aligned_cols=165 Identities=19% Similarity=0.213 Sum_probs=130.1
Q ss_pred CCCcEEEEcCCcchHHHHHHHHHHHHHcC---CCCCCCcEEeccHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHhc---
Q 015942 151 VTTPGFSFSAAGLLFPYHLGVAQLLIEKG---YIKETTPLAGSSAGAIACAVIAS-GASMQEALNATKTLAENCRRR--- 223 (398)
Q Consensus 151 ~~~~aLvLsGGG~rG~~hiGVlkaL~e~g---l~~~~d~IaGTSaGAivAalla~-g~~~~el~~~~~~~~~~~~~~--- 223 (398)
.+-..|+|+|||+||++|+|||++|+++. +...||.|+|||+|||+|++++. +++.+|+.+.+..+....+..
T Consensus 6 ~~~riLsLdGGGirG~~~~~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~~~~~~~e~~~~y~~~~~~iF~~~~~ 85 (308)
T cd07211 6 RGIRILSIDGGGTRGVVALEILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGLKKMSLDECEELYRKLGKDVFSQNTY 85 (308)
T ss_pred CCcEEEEECCChHHHHHHHHHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhcccccHHHHHHHHHHHHHHhcCCCcc
Confidence 34457999999999999999999999983 33358999999999999999987 689999999988876554422
Q ss_pred ----------CCcccchHHHHHHHHHhCCCchhhhc----CCc-EEEEEEeccC-CCceeEEeccCCh------------
Q 015942 224 ----------GTAFRLGAVLRDILQKFLPDDVHTRS----SGR-VRVAVTQILW-RPRGLLVDQFDSK------------ 275 (398)
Q Consensus 224 ----------g~~~~~~~~l~~~L~~~l~~~~~e~~----~~r-L~I~aT~l~~-~~~~~l~~~f~s~------------ 275 (398)
.+.++ .+.++++|++++++..+.+. ..+ +.|++|.+.. ..++++++++..+
T Consensus 86 ~~~~~~~~~~~~~y~-~~~l~~~l~~~~g~~~l~~~~~~~~~p~~~v~st~~~~~~~~p~~f~ny~~~~~~~~~~~~~~~ 164 (308)
T cd07211 86 ISGTSRLVLSHAYYD-TETWEKILKEMMGSDELIDTSADPNCPKVACVSTQVNRTPLKPYVFRNYNHPPGTRSHYLGSCK 164 (308)
T ss_pred ccchhhhhccCCccC-hHHHHHHHHHHhCCccccccccCCCCCEEEEEEEeccCCCCceEEEeCCCCCCCcccccCCccc
Confidence 12333 68899999999998776443 333 6667765541 3466677655321
Q ss_pred hhHHHHHHHhcccccccCCcccceeCCeEEEeccccCCCCchhh
Q 015942 276 EDLINAVLTSSFIPGYLAPRPATMFRNRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 276 ~~LidAV~AS~aiP~~f~pv~~~~~~G~~yvDGGl~~n~P~~~~ 319 (398)
..+++|++||||+|+||+|+ .+++..|+|||+.+|+|+..+
T Consensus 165 ~~l~dA~rASsAaP~~F~p~---~i~~~~~vDGGv~aNnP~~~a 205 (308)
T cd07211 165 HKLWEAIRASSAAPGYFEEF---KLGNNLHQDGGLLANNPTALA 205 (308)
T ss_pred ccHHHHHHHhccchhcCCcE---EECCCeEEECCcccCCcHHHH
Confidence 35889999999999999999 899999999999999998765
No 30
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=99.92 E-value=1.9e-24 Score=211.48 Aligned_cols=157 Identities=22% Similarity=0.264 Sum_probs=129.2
Q ss_pred EEEEcCCcchHHHHHHHHHHHHHcC--CCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc--------C
Q 015942 155 GFSFSAAGLLFPYHLGVAQLLIEKG--YIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRR--------G 224 (398)
Q Consensus 155 aLvLsGGG~rG~~hiGVlkaL~e~g--l~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~--------g 224 (398)
.|+|+|||+||++|+|||++|++++ +...+|.|+|||+||++|+++++|.+.+++.+.+.......+.. +
T Consensus 4 iLsLdGGG~RGi~~~~vL~~Le~~~~~~~~~fD~i~GTSaGaiia~~la~g~~~~e~~~~~~~~~~~iF~~~~~~~~~~~ 83 (288)
T cd07213 4 ILSLDGGGVKGIVQLVLLKRLAEEFPSFLDQIDLFAGTSAGSLIALGLALGYSPRQVLKLYEEVGLKVFSKSSAGGGAGN 83 (288)
T ss_pred EEEECCCcHHHHHHHHHHHHHHHhCcccccceeEEEEeCHHHHHHHHHHcCcCHHHHHHHHHHhCccccCCCcccccccc
Confidence 6999999999999999999999996 33458999999999999999999999999999888765443321 1
Q ss_pred CcccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCc--------eeEEeccCC----hhhHHHHHHHhccccccc
Q 015942 225 TAFRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPR--------GLLVDQFDS----KEDLINAVLTSSFIPGYL 292 (398)
Q Consensus 225 ~~~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~--------~~l~~~f~s----~~~LidAV~AS~aiP~~f 292 (398)
..+.....+++++++++++.++.++..++.|+++++. +++ +++++++.. ...+++|++||||+|+||
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~~~~-~~~~~~~~~~~~~~f~n~~~~~~~~~~l~d~~~ASsAaP~~F 162 (288)
T cd07213 84 NQYFAAGFLKAFAEVFFGDLTLGDLKRKVLVPSFQLD-SGKDDPNRRWKPKLFHNFPGEPDLDELLVDVCLRSSAAPTYF 162 (288)
T ss_pred ccCCchHHHHHHHHHHhCcCCHhhcCCCEEEEEEecc-CCCCCccccccceEeecCCCCCCccccHHHHHHHhccccccc
Confidence 1122223788899999999999999999999999987 443 467766532 357899999999999999
Q ss_pred CCcccceeCCeEEEeccccCCCCchhh
Q 015942 293 APRPATMFRNRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 293 ~pv~~~~~~G~~yvDGGl~~n~P~~~~ 319 (398)
+|+ +.|+|||+.+|+|+..+
T Consensus 163 ~p~-------~~~iDGGv~~NnP~~~a 182 (288)
T cd07213 163 PSY-------QGYVDGGVFANNPSLCA 182 (288)
T ss_pred hhh-------hceecceeecCChHHHH
Confidence 987 35999999999998765
No 31
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=99.91 E-value=6.7e-24 Score=213.06 Aligned_cols=161 Identities=18% Similarity=0.256 Sum_probs=133.1
Q ss_pred cEEEEcCCcchHHHHHHHHHHHHHc-------C--CCCCCCcEEeccHHHHHHHHHHcC-------CCHHHHHHHHHHHH
Q 015942 154 PGFSFSAAGLLFPYHLGVAQLLIEK-------G--YIKETTPLAGSSAGAIACAVIASG-------ASMQEALNATKTLA 217 (398)
Q Consensus 154 ~aLvLsGGG~rG~~hiGVlkaL~e~-------g--l~~~~d~IaGTSaGAivAalla~g-------~~~~el~~~~~~~~ 217 (398)
..|+|+|||+||+++++||++|+++ + +...||.|+|||+|||+|++++++ ++.+|+.+++.+..
T Consensus 5 rILslDGGGiRGi~~a~iL~~lE~~l~~~~g~~~~i~~~FDliaGTStGgiiA~~la~~~~~~~p~~~~~e~~~~y~~~~ 84 (349)
T cd07214 5 TVLSIDGGGIRGIIPATILEFLEGKLQELDGPDARIADYFDVIAGTSTGGLITAMLTAPNENKRPLFAAKDIVQFYLENG 84 (349)
T ss_pred EEEEECCCchhhHHHHHHHHHHHHHHHHhcCCCCCHhHhCCEEeeCCHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhh
Confidence 4699999999999999999999987 2 333589999999999999999986 56789988887765
Q ss_pred HHHHhc----------------CCcccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCCh------
Q 015942 218 ENCRRR----------------GTAFRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSK------ 275 (398)
Q Consensus 218 ~~~~~~----------------g~~~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~------ 275 (398)
..++.. ++.++ .+.++++|++++++.++.++..++.|+++++. ++++++++.++.+
T Consensus 85 ~~iF~~~~~~~~~~~~~~~~~~~~~y~-~~~L~~~L~~~~gd~~l~d~~~~v~I~a~dl~-~~~p~~F~~~~~~~~~~~~ 162 (349)
T cd07214 85 PKIFPQSTGQFEDDRKKLRSLLGPKYD-GVYLHDLLNELLGDTRLSDTLTNVVIPTFDIK-LLQPVIFSSSKAKNDKLTN 162 (349)
T ss_pred HHhcCCCcccchhHHHHHHHhccCccC-cHHHHHHHHHHhccccHhhhCCceEEEeEECC-CCCeEEEeCccccCCcccC
Confidence 543321 23344 68899999999999999889899999999998 7889888766432
Q ss_pred hhHHHHHHHhcccccccCCcccceeC---------CeEEEeccccCCCCchhh
Q 015942 276 EDLINAVLTSSFIPGYLAPRPATMFR---------NRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 276 ~~LidAV~AS~aiP~~f~pv~~~~~~---------G~~yvDGGl~~n~P~~~~ 319 (398)
..+++|++||||+|+||+|+ .++ +..|+|||+.+|+|+..+
T Consensus 163 ~~l~da~rASSAaPtyFpp~---~i~~~~~~g~~~~~~~vDGGv~aNNP~~~A 212 (349)
T cd07214 163 ARLADVCISTSAAPTYFPAH---YFTTEDSNGDIREFNLVDGGVAANNPTLLA 212 (349)
T ss_pred cCHHHHHHHhcccccccCCe---EeecccCCCCcceEEEecCceecCCHHHHH
Confidence 25899999999999999998 443 357999999999997655
No 32
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=99.91 E-value=9.2e-24 Score=211.45 Aligned_cols=163 Identities=17% Similarity=0.147 Sum_probs=127.9
Q ss_pred cEEEEcCCcchHHHHHHHHHHHHHcC----------CCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc
Q 015942 154 PGFSFSAAGLLFPYHLGVAQLLIEKG----------YIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRR 223 (398)
Q Consensus 154 ~aLvLsGGG~rG~~hiGVlkaL~e~g----------l~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~ 223 (398)
..|+|+|||+||++|+|||++|+++- +...||.|+|||+|||+|++++.|++++|+.+++......++..
T Consensus 2 rILsLDGGGiRGi~~~gvL~~LE~~l~~~~~~p~~~l~d~FDlIaGTStGgIIAa~la~g~s~~ei~~~y~~~~~~iF~~ 81 (344)
T cd07217 2 KILALDGGGIRGLLSVEILGRIEKDLRTHLDDPEFRLGDYFDFVGGTSTGSIIAACIALGMSVTDLLSFYTLNGVNMFDK 81 (344)
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHHhhhccCCccccccccccEEEEecHHHHHHHHHHcCCCHHHHHHHHHhhhhhhcCc
Confidence 46999999999999999999998861 23348999999999999999999999999999987765443321
Q ss_pred --------CCc----ccchHHHHHHHHHhCCCchhhhc--CCcEEEEEEeccCCCceeEEeccC-------------Chh
Q 015942 224 --------GTA----FRLGAVLRDILQKFLPDDVHTRS--SGRVRVAVTQILWRPRGLLVDQFD-------------SKE 276 (398)
Q Consensus 224 --------g~~----~~~~~~l~~~L~~~l~~~~~e~~--~~rL~I~aT~l~~~~~~~l~~~f~-------------s~~ 276 (398)
.+. ++ .+.+++.|++++++.++.+. ..++.|+++++. +++++++++.. ...
T Consensus 82 ~~~~~~l~~~~~~~~y~-~~~L~~~L~~~fg~~~l~d~~~~~~l~i~a~dl~-tg~p~~f~~~~~~~~~~~~~~~~~~~~ 159 (344)
T cd07217 82 AWLAQRLFLNKLYNQYD-PTNLGKKLNTVFPETTLGDDTLRTLLMIVTRNAT-TGSPWPVCNNPEAKYNDSDRSDCNLDL 159 (344)
T ss_pred hhhhhhccccccccccC-cHHHHHHHHHHcCceeecccccCceEEEEEEecC-CCCeeEeecCchhhcccccccCcccCC
Confidence 111 33 67899999999999888763 456999999997 77887665421 123
Q ss_pred hHHHHHHHhcccccccCCcccceeC---CeEEEecccc-CCCCchhh
Q 015942 277 DLINAVLTSSFIPGYLAPRPATMFR---NRLCIDGGLT-LFMPPTSA 319 (398)
Q Consensus 277 ~LidAV~AS~aiP~~f~pv~~~~~~---G~~yvDGGl~-~n~P~~~~ 319 (398)
.|++|++||||+|+||+|+.+ ... +..+||||+. .|+|...+
T Consensus 160 ~L~da~rASsAaPt~FpP~~i-~~~~~~~~~lVDGGv~aaNNP~l~A 205 (344)
T cd07217 160 PLWQLVRASTAAPTFFPPEVV-SIAPGTAFVFVDGGVTTYNNPAFQA 205 (344)
T ss_pred cHHHHHHHHccCccccCceEE-EecCCceEEEECCccccccCHHHHH
Confidence 689999999999999999832 122 3579999998 58898644
No 33
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=99.90 E-value=1.9e-23 Score=206.34 Aligned_cols=161 Identities=19% Similarity=0.245 Sum_probs=129.6
Q ss_pred EEEEcCCcchHHHHHHHHHHHHHcCC-----------CCCCCcEEeccHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHh
Q 015942 155 GFSFSAAGLLFPYHLGVAQLLIEKGY-----------IKETTPLAGSSAGAIACAVIAS-GASMQEALNATKTLAENCRR 222 (398)
Q Consensus 155 aLvLsGGG~rG~~hiGVlkaL~e~gl-----------~~~~d~IaGTSaGAivAalla~-g~~~~el~~~~~~~~~~~~~ 222 (398)
.|+|+|||+||++|+++|++|+++.- ...||.|+|||+|||+|++++. +++.+|+.+.+..+.+.++.
T Consensus 3 ILslDGGGiRGl~~~~iL~~le~~l~~~~~~~~~~~~~~~fDli~GTStGgiiA~~l~~~~~t~~e~~~~y~~~~~~iF~ 82 (309)
T cd07216 3 LLSLDGGGVRGLSSLLILKEIMERIDPKEGLDEPPKPCDYFDLIGGTSTGGLIAIMLGRLRMTVDECIDAYTRLAKKIFS 82 (309)
T ss_pred EEEEcCCchhHHHHHHHHHHHHHHhhhccccCCCCChhHhcCeeeeccHHHHHHHHhcccCCCHHHHHHHHHHHhHHhCC
Confidence 59999999999999999999998821 2238999999999999999984 89999999999888776653
Q ss_pred cC------------CcccchHHHHHHHHHhCCCchhh---------hcCCcEEEEEEeccCCCceeEEeccCCh------
Q 015942 223 RG------------TAFRLGAVLRDILQKFLPDDVHT---------RSSGRVRVAVTQILWRPRGLLVDQFDSK------ 275 (398)
Q Consensus 223 ~g------------~~~~~~~~l~~~L~~~l~~~~~e---------~~~~rL~I~aT~l~~~~~~~l~~~f~s~------ 275 (398)
.. ..++ ...+++.+++.+++..+. ....++.|++|+...+++++++++++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~d-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~~~~~f~~y~~~~~~~~~ 161 (309)
T cd07216 83 RKRLRLIIGDLRTGARFD-SKKLAEAIKVILKELGNDEDDLLDEGEEDGCKVFVCATDKDVTGKAVRLRSYPSKDEPSLY 161 (309)
T ss_pred CCCccccccccccCCCCC-hHHHHHHHHHHHHhcCCCchhhhccccccCCCEEEEEEeeCCCCceEEEecCCCCCCCCcc
Confidence 31 1232 567888888877654432 2345689999987536788888877533
Q ss_pred --hhHHHHHHHhcccccccCCccccee--CCeEEEeccccCCCCchhh
Q 015942 276 --EDLINAVLTSSFIPGYLAPRPATMF--RNRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 276 --~~LidAV~AS~aiP~~f~pv~~~~~--~G~~yvDGGl~~n~P~~~~ 319 (398)
..+++|++||||+|+||+|+ .+ ++..|+|||+..|+|+..+
T Consensus 162 ~~~~l~~a~rASsAaP~~f~p~---~~~~~~~~~vDGGv~~NnP~~~a 206 (309)
T cd07216 162 KNATIWEAARATSAAPTFFDPV---KIGPGGRTFVDGGLGANNPIREV 206 (309)
T ss_pred cCccHHHHHHHHhhhHhhCCCE---EecCCCceEecCCcccCCcHHHH
Confidence 26889999999999999999 67 8999999999999999876
No 34
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=99.89 E-value=5.7e-23 Score=204.73 Aligned_cols=160 Identities=18% Similarity=0.168 Sum_probs=129.3
Q ss_pred EEEEcCCcchHHHHHHHHHHHHHcC----------CCCCCCcEEeccHHHHHHHHHHc-------CCCHHHHHHHHHHHH
Q 015942 155 GFSFSAAGLLFPYHLGVAQLLIEKG----------YIKETTPLAGSSAGAIACAVIAS-------GASMQEALNATKTLA 217 (398)
Q Consensus 155 aLvLsGGG~rG~~hiGVlkaL~e~g----------l~~~~d~IaGTSaGAivAalla~-------g~~~~el~~~~~~~~ 217 (398)
.|+|+|||+||+++++||+.|+++. +...||.|+|||+|||+|++++. +++.+|+.+++.+..
T Consensus 2 ILslDGGGirG~~~~~iL~~le~~l~~~~g~~~~~i~~~fDli~GTStGgiia~~l~~~~~~g~~~~s~~e~~~~y~~~~ 81 (329)
T cd07215 2 ILSIDGGGIRGIIPATILVSVEEKLQKKTGNPEARLADYFDLVAGTSTGGILTCLYLCPNESGRPKFSAKEALNFYLERG 81 (329)
T ss_pred EEEEcCChHHHHHHHHHHHHHHHHHhhhcCCCCCcHhhccCeeeccCHHHHHHHHHhCCCCCCCCCcCHHHHHHHHHHhh
Confidence 5999999999999999999999861 34458999999999999999875 568889999887765
Q ss_pred HHHHhc-------------CCcccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCCh------hhH
Q 015942 218 ENCRRR-------------GTAFRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSK------EDL 278 (398)
Q Consensus 218 ~~~~~~-------------g~~~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~------~~L 278 (398)
...+.. ++.++ .+.+++.|++++++.++.++..++.|+++++. ++++++++..... -.+
T Consensus 82 ~~IF~~~~~~~~~~~~~~~~~~y~-~~~L~~~L~~~fg~~~l~d~~~~~~i~a~d~~-~~~~~~f~~~~~~~~~~~~~~l 159 (329)
T cd07215 82 NYIFKKKIWNKIKSRGGFLNEKYS-HKPLEEVLLEYFGDTKLSELLKPCLITSYDIE-RRSPHFFKSHTAIKNEQRDFYV 159 (329)
T ss_pred HhhcccchhhhhhhhccccccccC-cHHHHHHHHHHhCCCchhhhcCCceEEeeecC-CCCceEecCcccCCCcccCccH
Confidence 443221 12333 68899999999999999888889999999998 7788777654321 138
Q ss_pred HHHHHHhcccccccCCcccceeC---Ce--EEEeccccCCCCchhh
Q 015942 279 INAVLTSSFIPGYLAPRPATMFR---NR--LCIDGGLTLFMPPTSA 319 (398)
Q Consensus 279 idAV~AS~aiP~~f~pv~~~~~~---G~--~yvDGGl~~n~P~~~~ 319 (398)
++|++||||+|.||+|+ .++ |+ .|+|||+.+|+|+..+
T Consensus 160 ~da~~ASsAaP~~F~p~---~i~~~~g~~~~~vDGGv~aNnP~~~a 202 (329)
T cd07215 160 RDVARATSAAPTYFEPA---RIHSLTGEKYTLIDGGVFANNPTLCA 202 (329)
T ss_pred HHHhHHHhhcccccCce---EeecCCCcEEEEecCceecCCHHHHH
Confidence 89999999999999998 453 32 5899999999998765
No 35
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=99.89 E-value=7e-23 Score=183.17 Aligned_cols=133 Identities=32% Similarity=0.454 Sum_probs=107.3
Q ss_pred EEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCCcccchHHHHH
Q 015942 156 FSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRRGTAFRLGAVLRD 235 (398)
Q Consensus 156 LvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~g~~~~~~~~l~~ 235 (398)
|+|+|||+||+||+||+++|+|+++...+++++|+|+||++|+.++ ... ..+ .....+
T Consensus 1 l~~~GGg~~~~~~~gvl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~---p~~-----------------~~~--~~~~~~ 58 (155)
T cd01819 1 LSFSGGGFRGMYHAGVLSALAERGLLDCVTYLAGTSGGAWVAATLY---PPS-----------------SSL--DNKPRQ 58 (155)
T ss_pred CEEcCcHHHHHHHHHHHHHHHHhCCccCCCEEEEEcHHHHHHHHHh---Chh-----------------hhh--hhhhhh
Confidence 6899999999999999999999998666999999999999999999 100 000 111111
Q ss_pred HHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCccc---------ceeCCeEEE
Q 015942 236 ILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPA---------TMFRNRLCI 306 (398)
Q Consensus 236 ~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~---------~~~~G~~yv 306 (398)
.+. ++...++.|.+|++. +++..++..+...+++++|++|||++|++|++++. .++++..|+
T Consensus 59 ~~~--------~~~~~~~~i~~T~~~-tG~~~~~~~~~~~~~~~~av~aS~s~P~~f~~v~~~~~~~~~~~~~~~g~~lV 129 (155)
T cd01819 59 SLE--------EALSGKLWVSFTPVT-AGENVLVSRFVSKEELIRALFASGSWPSYFGLIPPAELYTSKSNLKEKGVRLV 129 (155)
T ss_pred hhH--------HhcCCCeEEEEEEcC-CCcEEEEeccccchHHHHHHhHHhhhhhhcCCcccccccccccccccCCeEEe
Confidence 111 567888999999998 88888776666778999999999999999999843 134899999
Q ss_pred eccccCCCCchhh
Q 015942 307 DGGLTLFMPPTSA 319 (398)
Q Consensus 307 DGGl~~n~P~~~~ 319 (398)
|||+++|+|+...
T Consensus 130 DGG~~~~iP~~~~ 142 (155)
T cd01819 130 DGGVSNNLPAPVL 142 (155)
T ss_pred ccceecCcCCccc
Confidence 9999999999753
No 36
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=99.89 E-value=3.8e-22 Score=188.97 Aligned_cols=164 Identities=18% Similarity=0.206 Sum_probs=122.2
Q ss_pred ccCCCcEEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHH--------
Q 015942 149 RVVTTPGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENC-------- 220 (398)
Q Consensus 149 ~~~~~~aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~-------- 220 (398)
...+++|||++|||.||+|++|||.++......| ++.+.|+||||++++.|.+... ........+++...
T Consensus 7 ~~~~kvaLV~EGGG~RgifTAGVLD~fl~a~~~~-f~~~~GvSAGA~n~~aYls~Q~-gra~~~~~~yt~d~ry~~~~~~ 84 (292)
T COG4667 7 YQPGKVALVLEGGGQRGIFTAGVLDEFLRANFNP-FDLVVGVSAGALNLVAYLSKQR-GRARRVIVEYTTDRRYFGPLSF 84 (292)
T ss_pred cCCCcEEEEEecCCccceehHHHHHHHHHhccCC-cCeeeeecHhHHhHHHHhhcCC-chHHHHHHHhhcchhhcchhhh
Confidence 4578999999999999999999999999555443 8999999999999999998875 33344444443221
Q ss_pred HhcCCcccchHHHHHHHHHhCCC--chhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccc
Q 015942 221 RRRGTAFRLGAVLRDILQKFLPD--DVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPAT 298 (398)
Q Consensus 221 ~~~g~~~~~~~~l~~~L~~~l~~--~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~ 298 (398)
-..+..++..-.+++.-++.++- ++|....+++.+++|+.. ++..+... ..+..+..+.|+||||+|++.+++
T Consensus 85 vr~gn~~n~d~~~~~~~~~~~~fD~~tf~~~~~k~~~~~~~~~-~g~~~~~~-~~~~~~~m~viRASSaiPf~~~~V--- 159 (292)
T COG4667 85 VRGGNYFNLDWAFEETPQKLFPFDFDTFSQDKGKFFYMATCRQ-DGEAVYYF-LPDVFNWLDVIRASSAIPFYSEGV--- 159 (292)
T ss_pred hccCcccchHHHHhhccCcCCCccHHHHhcccCCeEEEEEecc-CCccceee-cccHHHHHHHHHHhccCCCCCCCe---
Confidence 12234555433333333444443 456667888999999987 55554431 234567889999999999888888
Q ss_pred eeCCeEEEeccccCCCCchhh
Q 015942 299 MFRNRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 299 ~~~G~~yvDGGl~~n~P~~~~ 319 (398)
+++|+.|+|||+.+.+|+..+
T Consensus 160 ~i~G~~YlDGGIsdsIPvq~a 180 (292)
T COG4667 160 EINGKNYLDGGISDSIPVKEA 180 (292)
T ss_pred EECCEecccCcccccccchHH
Confidence 999999999999999999887
No 37
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=99.88 E-value=1.9e-22 Score=194.12 Aligned_cols=131 Identities=21% Similarity=0.276 Sum_probs=113.9
Q ss_pred EEEcCCcchHHHHHHHHHHHHHc---C--CCCCCCcEEeccHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHhcCCcccc
Q 015942 156 FSFSAAGLLFPYHLGVAQLLIEK---G--YIKETTPLAGSSAGAIACAVIASG-ASMQEALNATKTLAENCRRRGTAFRL 229 (398)
Q Consensus 156 LvLsGGG~rG~~hiGVlkaL~e~---g--l~~~~d~IaGTSaGAivAalla~g-~~~~el~~~~~~~~~~~~~~g~~~~~ 229 (398)
|+|+|||.||++++|+|++|+++ . +...||.|+|||+||++|++++.+ ++++++.+.+.......+.
T Consensus 2 LsldGGG~rG~~~~~~L~~le~~~~~~~~~~~~fd~i~GtS~G~iia~~l~~~~~~~~~~~~~~~~~~~~if~------- 74 (258)
T cd07199 2 LSLDGGGIRGIIPAEILAELEKRLGKPSRIADLFDLIAGTSTGGIIALGLALGRYSAEELVELYEELGRKIFP------- 74 (258)
T ss_pred EEECCchHhHHHHHHHHHHHHHHhCCCCchhhccceeeeccHHHHHHHHHhcCCCCHHHHHHHHHHHhHhhcc-------
Confidence 89999999999999999999998 2 555699999999999999999999 8999988877665543321
Q ss_pred hHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCceeEEeccCCh-------hhHHHHHHHhcccccccCCccccee--
Q 015942 230 GAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSK-------EDLINAVLTSSFIPGYLAPRPATMF-- 300 (398)
Q Consensus 230 ~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~-------~~LidAV~AS~aiP~~f~pv~~~~~-- 300 (398)
++.|+++++. ++++++++++..+ ..+++|++||||+|.+|+|+ .+
T Consensus 75 ----------------------~~~i~a~~~~-~~~~~~f~~~~~~~~~~~~~~~l~d~~~ASsAaP~~f~p~---~i~~ 128 (258)
T cd07199 75 ----------------------RVLVTAYDLS-TGKPVVFSNYDAEEPDDDDDFKLWDVARATSAAPTYFPPA---VIES 128 (258)
T ss_pred ----------------------CeEEEEEEcC-CCCeEEEECCCCcccCCcCCccHHHHHHHHhcchhccCcE---Eecc
Confidence 8999999998 7889988887543 25889999999999999999 67
Q ss_pred --CCeEEEeccccCCCCchhh
Q 015942 301 --RNRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 301 --~G~~yvDGGl~~n~P~~~~ 319 (398)
++..|+|||+.+|+|+..+
T Consensus 129 ~~~~~~~vDGGv~~NnP~~~a 149 (258)
T cd07199 129 GGDEGAFVDGGVAANNPALLA 149 (258)
T ss_pred CCCeeEEecCccccCChHHHH
Confidence 8899999999999998776
No 38
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=99.86 E-value=4.4e-23 Score=184.21 Aligned_cols=159 Identities=29% Similarity=0.311 Sum_probs=95.5
Q ss_pred EEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHH---------------
Q 015942 156 FSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENC--------------- 220 (398)
Q Consensus 156 LvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~--------------- 220 (398)
|||+|||.||+||+||+++| +.+....+|+|+|||+||++|++++++.+.++..+.+..+....
T Consensus 1 LvlsGGG~rg~~~~G~l~~L-~~~~~~~~d~i~GtS~Gal~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (204)
T PF01734_consen 1 LVLSGGGSRGAYQAGVLKAL-GQGLGERFDVISGTSAGALNAALLALGYDPDESLDQFYDLWRNLFFSSNLMKRRRPRKA 79 (204)
T ss_dssp EEE---CCGCCCCHHHHHHH-CCTGCCT-SEEEEECCHHHHHHHHHTC-TCCCCCCHHCCHHHHHHHCCCTH------HH
T ss_pred CEEcCcHHHHHHHHHHHHHH-hhhhCCCccEEEEcChhhhhHHHHHhCCCHHHHHHHHHHHHHhhccccccccccccccc
Confidence 79999999999999999999 33333348999999999999999999865433222211111000
Q ss_pred -------HhcCCcccchHHHHHHHHHhCCCchhhhcCCcEEEE---------------EEecc---C--CCcee--EEec
Q 015942 221 -------RRRGTAFRLGAVLRDILQKFLPDDVHTRSSGRVRVA---------------VTQIL---W--RPRGL--LVDQ 271 (398)
Q Consensus 221 -------~~~g~~~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~---------------aT~l~---~--~~~~~--l~~~ 271 (398)
......+. ...+++.+++.+++...+......... .+... . ..... ....
T Consensus 80 ~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (204)
T PF01734_consen 80 FRRLRGLFGGSGLFD-SEPLRDWLRRVLGDLTLEEFSARLPRAIGAADDFTTRSRSIFQSPSSPFRASSNNFNESRSRYD 158 (204)
T ss_dssp T-------SSS-SS---HHHHHHHHHHHCCHCHHHHCTCECCC-EE--------------EEECCCCECCEEECCCCCTT
T ss_pred cccccccccCccchh-HHHHHHHHHHhccccCHHHhhhcccccccccccccccccccccccccccccccccccccccccc
Confidence 00112333 688999999888877665433221111 00000 0 00000 0011
Q ss_pred cCChhhHHHHHHHhcccccccCCcccceeCCeEEEeccccCCCCchhh
Q 015942 272 FDSKEDLINAVLTSSFIPGYLAPRPATMFRNRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 272 f~s~~~LidAV~AS~aiP~~f~pv~~~~~~G~~yvDGGl~~n~P~~~~ 319 (398)
..+...+++|++||||+|++|+|+ .++|..|+|||+.+|+|+..+
T Consensus 159 ~~~~~~l~~a~~AS~a~P~~~~p~---~~~g~~~~DGG~~~n~P~~~a 203 (204)
T PF01734_consen 159 FDPDVPLWDAVRASSAIPGIFPPV---KIDGEYYIDGGILDNNPIEAA 203 (204)
T ss_dssp CCCTSBHHHHHHHCCHSTTTSTTE---EETS-EEEEGGGCS---GGGC
T ss_pred CCCcchHHHhhChhccccccCCCE---EECCEEEEecceeeccccccC
Confidence 234567899999999999999999 899999999999999999764
No 39
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=99.73 E-value=3.1e-17 Score=176.87 Aligned_cols=165 Identities=22% Similarity=0.221 Sum_probs=115.3
Q ss_pred CcEEEEcCCcchHHHHHHHHHHHHHc-----------------------------------CCCCCCCcEEeccHHHHHH
Q 015942 153 TPGFSFSAAGLLFPYHLGVAQLLIEK-----------------------------------GYIKETTPLAGSSAGAIAC 197 (398)
Q Consensus 153 ~~aLvLsGGG~rG~~hiGVlkaL~e~-----------------------------------gl~~~~d~IaGTSaGAivA 197 (398)
++||||.|||++++|+.||++++.+. ++. +++|+|||||||+|
T Consensus 3 RlalVl~GG~slA~y~~GV~~ei~~l~~~~~~~~~~~~~~~~~~~~~Y~~l~~~l~~~~~~~~~--~d~iaGTSAGAIna 80 (739)
T TIGR03607 3 RLALVMYGGVSLAVYMHGVTKEINRLVRASRAYHGYPDEASAGTEAVYGALLELLGAHLRLRVR--VDVISGTSAGGING 80 (739)
T ss_pred eEEEEecCcHHHHHHHHHHHHHHHHHhhhhcccccccccccccchhHHHHHHHHhhhhhccCCC--CceEEeeCHHHHHH
Confidence 68999999999999999999998763 233 89999999999999
Q ss_pred HHHHc----CCCHHHHHHHHHHHH---HHHHh---------cCCcccchHHHHHHHHHhCCCc------hhhhcC-----
Q 015942 198 AVIAS----GASMQEALNATKTLA---ENCRR---------RGTAFRLGAVLRDILQKFLPDD------VHTRSS----- 250 (398)
Q Consensus 198 alla~----g~~~~el~~~~~~~~---~~~~~---------~g~~~~~~~~l~~~L~~~l~~~------~~e~~~----- 250 (398)
+++|+ |.+.+++.+++.... +.+.. ....+..|+.+.++|.+.+++. ++.+++
T Consensus 81 a~lA~~~~~g~~~~~L~~~W~~~~d~~~lLd~~~~~~~~~~~~~sLl~G~~l~~~L~~~L~~~~~~~~~~~~~lp~~~~~ 160 (739)
T TIGR03607 81 VLLAYALAYGADLDPLRDLWLELADIDALLRPDAKAWPRLRRPGSLLDGEYFLPLLLDALAAMVRAGPAGPSLLPTGTRP 160 (739)
T ss_pred HHHHcccccCCCHHHHHHHHHhcccHHhhcChhhhccccccCCccccccHHHHHHHHHHHHHhCCCCCCCccccccCCCC
Confidence 99998 667777777544332 11111 1122233788888888776643 344443
Q ss_pred CcEEEEEEeccCCCcee-E------------------Eec----------cCCh--hhHHHHHHHhcccccccCCcccc-
Q 015942 251 GRVRVAVTQILWRPRGL-L------------------VDQ----------FDSK--EDLINAVLTSSFIPGYLAPRPAT- 298 (398)
Q Consensus 251 ~rL~I~aT~l~~~~~~~-l------------------~~~----------f~s~--~~LidAV~AS~aiP~~f~pv~~~- 298 (398)
..|+|++|++. |+.. + |.+ |... ..|..|++||||+|++|+|+.+.
T Consensus 161 ~dL~VTaTDl~--G~~~~l~dd~~~~~~e~~hr~~f~F~~~~~~~~~~~d~~~~~~~~lA~AaRaSaSfP~aF~Pv~l~~ 238 (739)
T TIGR03607 161 LDLFVTATDLR--GRSTRLFDDDGTVVEEREHRGVFRFTEAGRAGGRLSDFDAANAPRLAFAARATASFPGAFPPSRLAE 238 (739)
T ss_pred ccEEEEEEcCC--CcEEEeecCCCcccccccccceeeeecccCCCCCCccccccccHHHHHHHHHhcCCCcccCceehhh
Confidence 45999999884 1111 1 111 0000 35789999999999999999420
Q ss_pred -------------------------------eeCCeEEEeccccCCCCchhhcc
Q 015942 299 -------------------------------MFRNRLCIDGGLTLFMPPTSASN 321 (398)
Q Consensus 299 -------------------------------~~~G~~yvDGGl~~n~P~~~~~~ 321 (398)
...+.+|+|||+.+|.|+.++-.
T Consensus 239 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDGGvldN~Pl~pal~ 292 (739)
T TIGR03607 239 IDDVLARRFLPWGGRDAFLHPDFPDYAELGTTPRPRYVVDGGVLDNRPFAPALE 292 (739)
T ss_pred hhHHHHhccCCCCccccccccccccccccCCCccceEEeecccccCcchHHHHH
Confidence 01346899999999999987633
No 40
>COG3621 Patatin [General function prediction only]
Probab=99.66 E-value=8.7e-16 Score=149.22 Aligned_cols=162 Identities=20% Similarity=0.231 Sum_probs=125.0
Q ss_pred EEEEcCCcchHHHHHHHHHHHHH-cC--CCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHH-----H-------
Q 015942 155 GFSFSAAGLLFPYHLGVAQLLIE-KG--YIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAE-----N------- 219 (398)
Q Consensus 155 aLvLsGGG~rG~~hiGVlkaL~e-~g--l~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~-----~------- 219 (398)
-++|.|||+||..|+-+++.+++ +| +...+|.++|||.|+++++.++.|.++.|+.+.+..-.. .
T Consensus 11 IlsldGGGvrG~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks~~e~~qlF~~q~~q~f~ee~~~~~fp 90 (394)
T COG3621 11 ILSLDGGGVRGAILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKSPRELKQLFSAQQAQIFPEEMKHRIFP 90 (394)
T ss_pred EEEecCCccccHHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCCCchHHHHHHHhhhhhccHhhccCCCc
Confidence 48999999999999999999999 56 566689999999999999999999999998888764321 1
Q ss_pred ---HHh------cCCcccchHHHHHHHHHhCCCchhhhcCCcEEEEEEeccCCCc-eeEE----ecc---CChhhHHHHH
Q 015942 220 ---CRR------RGTAFRLGAVLRDILQKFLPDDVHTRSSGRVRVAVTQILWRPR-GLLV----DQF---DSKEDLINAV 282 (398)
Q Consensus 220 ---~~~------~g~~~~~~~~l~~~L~~~l~~~~~e~~~~rL~I~aT~l~~~~~-~~l~----~~f---~s~~~LidAV 282 (398)
++. .++.++ .+.|.+.|+.+.+|.++.++.+|+.|...++. ..+ +.+. +.+ .....|+|++
T Consensus 91 v~tFrq~l~~a~~~pkys-~~pLiK~lk~~~~D~tlkDL~~~Vvv~~~~l~-~~knp~~t~~~~~~~~~ry~~~~LsDii 168 (394)
T COG3621 91 VGTFRQLLSYALFSPKYS-PQPLIKLLKFVCKDYTLKDLIGRVVVPGYDLN-NQKNPLFTFSTHHARPSRYNNYKLSDII 168 (394)
T ss_pred chhHhhhhhhhhcCCcCC-chhHHHHHHHhccccchhhhccceEEEeeecc-cccCCceeecccCccccccccchHHHHH
Confidence 110 123444 57888999988899999999999999888886 333 2221 111 1223689999
Q ss_pred HHhcccccccCCcccceeCC---eEEEeccccCCCCchh
Q 015942 283 LTSSFIPGYLAPRPATMFRN---RLCIDGGLTLFMPPTS 318 (398)
Q Consensus 283 ~AS~aiP~~f~pv~~~~~~G---~~yvDGGl~~n~P~~~ 318 (398)
.||+|.|++|+|.....++. +.++|||++.|.|...
T Consensus 169 ~~stAAPtyFp~h~~~~i~~~k~~~~iDGGv~ANnPsla 207 (394)
T COG3621 169 LASTAAPTYFPPHHFENITNTKYHPIIDGGVVANNPSLA 207 (394)
T ss_pred HhcccCCcccCcccccccccccceeeecceeeecChhHH
Confidence 99999999999995422332 4789999999999854
No 41
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=99.59 E-value=4e-15 Score=150.99 Aligned_cols=165 Identities=19% Similarity=0.176 Sum_probs=128.2
Q ss_pred CCcEEEEcCCcchHHHHHHHHHHHHHc-C--CCCCCCcEEeccHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHhcC---
Q 015942 152 TTPGFSFSAAGLLFPYHLGVAQLLIEK-G--YIKETTPLAGSSAGAIACAVIA-SGASMQEALNATKTLAENCRRRG--- 224 (398)
Q Consensus 152 ~~~aLvLsGGG~rG~~hiGVlkaL~e~-g--l~~~~d~IaGTSaGAivAalla-~g~~~~el~~~~~~~~~~~~~~g--- 224 (398)
|-..|+++|||.||+..+-+|+.+++. | +..-||+|+|+|.|+|.|.++. -+++.+|+.+.+.++.+.++..+
T Consensus 416 G~rILSiDGGGtrG~~~lqiL~kieklsgKpIheLFD~ICGvSTG~ilA~~Lg~k~m~l~eCeEiY~~lgk~vFsq~v~~ 495 (763)
T KOG4231|consen 416 GLRILSIDGGGTRGLATLQILKKIEKLSGKPIHELFDLICGVSTGGILAIALGVKLMTLEECEEIYKNLGKLVFSQSVPK 495 (763)
T ss_pred ceEEEEecCCCccchhHHHHHHHHHHhcCCcHHHHHHHHhccCchHHHHHHHHhcCccHHHHHHHHHHHhHHHhhccccc
Confidence 335799999999999999999999887 3 3333899999999999998874 57899999999999988877643
Q ss_pred --------CcccchHHHHHHHHHhCCCch--hhhc---C-CcEEEEEEecc--CCCceeEEeccC------------Chh
Q 015942 225 --------TAFRLGAVLRDILQKFLPDDV--HTRS---S-GRVRVAVTQIL--WRPRGLLVDQFD------------SKE 276 (398)
Q Consensus 225 --------~~~~~~~~l~~~L~~~l~~~~--~e~~---~-~rL~I~aT~l~--~~~~~~l~~~f~------------s~~ 276 (398)
..+.....++..|++.+|++- ++.. + -++.|+.|=++ ++.++.+|.+|. .+.
T Consensus 496 g~~~~sw~Hs~y~~n~we~iLKem~ged~~mi~tsr~~~~PkvavVStiVn~~pT~qpfIFRNY~hp~G~~Shy~Ggc~h 575 (763)
T KOG4231|consen 496 GNEAASWIHSKYSANEWERILKEMCGEDGDMIITSRVKNVPKVAVVSTIVNVMPTAQPFIFRNYQHPVGTQSHYMGGCKH 575 (763)
T ss_pred cchhheehhhhcchHHHHHHHHHHhhhhhhHHHhhccCCCCceeehhhhhhcCCCccceeeeccCCCCCcchhhcccchH
Confidence 122335678888999988654 2211 2 23777666332 456777776662 234
Q ss_pred hHHHHHHHhcccccccCCcccceeCCeEEEeccccCCCCchhh
Q 015942 277 DLINAVLTSSFIPGYLAPRPATMFRNRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 277 ~LidAV~AS~aiP~~f~pv~~~~~~G~~yvDGGl~~n~P~~~~ 319 (398)
.+|+||+||+|.|+||.-+ ..+...|.|||+..|+|..-+
T Consensus 576 ~~WqAIrASsAAP~Yf~e~---~lgn~l~QDGgi~aNNPta~A 615 (763)
T KOG4231|consen 576 QVWQAIRASSAAPYYFDEF---SLGNYLWQDGGIVANNPTAFA 615 (763)
T ss_pred HHHHHHHhcccCCcchhhh---ccccceeccCcEeecCccHHH
Confidence 7999999999999999998 678889999999999998765
No 42
>PF11815 DUF3336: Domain of unknown function (DUF3336); InterPro: IPR021771 This family of proteins is characterised by an N-terminal domain that is found adjacent to the patatin/phospholipase A2-related domain (see PF01734 from PFAM). The family of proteins, which contain these two domains, have been characterised in Saccharomyces cerevisiae (Baker's yeast) as a bifunctional enzyme with triacylglycerol lipase and lysophosphatidic acid acyltransferase or lysophosphatidylethanolamine acyltransferase activity. They are generally involved in triacylglycerol mobilisation and localized to lipid particles [, ].
Probab=98.60 E-value=1.7e-08 Score=89.55 Aligned_cols=77 Identities=17% Similarity=0.067 Sum_probs=67.9
Q ss_pred ccceeeeechhhHHHHHHHhccccccccccCCCC-CcceecccCCCChhhHHHHHHhhhhcc----CCCCccHHHhhhhh
Q 015942 68 KRSFAVVTGELFLGIASRLLNGSNRLAANNFETI-PLIERSEKLGSSGEDYKERIGAVMEDE----IEPEVIWEQRVRDI 142 (398)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~ee~i~~v~~~~----~~~~~~~~~k~~~~ 142 (398)
...|..++.+..+.-+..++|+++. |||||+ +.+||+.+|.|||.+||+||.+|..+. ..+.++.++|++||
T Consensus 63 l~~L~~aR~~~d~~~l~~~Lr~~l~---RNlggi~n~~LY~~s~~GTK~lIe~Yi~ev~~~L~~l~~~~~~~~~~kl~ff 139 (145)
T PF11815_consen 63 LRELREARQSGDIEALMFLLRTGLH---RNLGGIGNPRLYSHSYSGTKRLIEEYIDEVVRCLEYLAESPELSDEEKLSFF 139 (145)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHh---cCccccCCHHHHHHccccchHHHHHHHHHHHHHHHHHHhCcCCCHHHHHHHH
Confidence 4567777888888888899999988 999998 899999999999999999999999873 44899999999999
Q ss_pred HHhhhhc
Q 015942 143 EAEKERR 149 (398)
Q Consensus 143 ~a~~~~~ 149 (398)
+ ++++
T Consensus 140 ~--~~~~ 144 (145)
T PF11815_consen 140 Q--ETRH 144 (145)
T ss_pred H--HHhc
Confidence 9 7765
No 43
>cd00147 cPLA2_like Cytosolic phospholipase A2, catalytic domain; hydrolyses arachidonyl phospholipids. Catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Calcium is required for cPLA2 to bind with membranes or phospholipids. Group IV cPLA2 includes six intercellular enzymes: cPLA2alpha, cPLA2beta, cPLA2gamma, cPLA2delta, cP
Probab=98.36 E-value=9.7e-07 Score=91.27 Aligned_cols=55 Identities=20% Similarity=0.126 Sum_probs=48.0
Q ss_pred cCCCcEEEEcCCcchH-HHHHHHHHHHHHcCCCCCCCcEEeccHHHH-HHHHHHcCC
Q 015942 150 VVTTPGFSFSAAGLLF-PYHLGVAQLLIEKGYIKETTPLAGSSAGAI-ACAVIASGA 204 (398)
Q Consensus 150 ~~~~~aLvLsGGG~rG-~~hiGVlkaL~e~gl~~~~d~IaGTSaGAi-vAalla~g~ 204 (398)
..+++||++||||.|+ ++|+|++++|.+.|++..+++|+|+|+|++ ++++++.+.
T Consensus 40 ~~p~i~~~~sGGG~Ra~~~~~G~l~~l~~~gll~~~~yisg~Sgg~w~~~~~~~~~~ 96 (438)
T cd00147 40 EVPVIAILGSGGGYRAMTGGAGALKALDEGGLLDCVTYLSGLSGSTWLMASLYSNPD 96 (438)
T ss_pred cCceEEEEecCchHHHHHhhhHHHHHHHhCCchhccceeeeccchHHHHHHHHHcCC
Confidence 3578999999999999 799999999999999988999999999995 555666554
No 44
>KOG3773 consensus Adiponutrin and related vesicular transport proteins; predicted alpha/beta hydrolase [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.14 E-value=3.6e-08 Score=96.77 Aligned_cols=287 Identities=31% Similarity=0.435 Sum_probs=175.1
Q ss_pred cccceeeeechhhHHHHHHHhccccccccccCCCCCcceecccCCCChhhHHHHHHhhhhccCCCCccHHHh-hhhhHHh
Q 015942 67 EKRSFAVVTGELFLGIASRLLNGSNRLAANNFETIPLIERSEKLGSSGEDYKERIGAVMEDEIEPEVIWEQR-VRDIEAE 145 (398)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ee~i~~v~~~~~~~~~~~~~k-~~~~~a~ 145 (398)
-++||+++||+++-....+..++-.- +.-.+.+-+++.+++|+.--|+..|... ...+.
T Consensus 56 ~~~~l~~a~~~l~~~v~e~~~~s~g~------------------~tP~f~~~~~l~~~le~~LPpda~~la~~rl~iS-- 115 (354)
T KOG3773|consen 56 CGLSLEEATGELYKMVDEARRKSLGA------------------FTPGFNLSDRLRSGLEDFLPPDAHWLASGRLHIS-- 115 (354)
T ss_pred ccccHHHHHHHHHHHHHHHHHhhcCC------------------CCCCcCHHHHHHHHHHHhCChHHHHHhhcceeEE--
Confidence 47889999999998887776665443 2556788999999999988888888333 23322
Q ss_pred hhhccCCCcEEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCC
Q 015942 146 KERRVVTTPGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRRGT 225 (398)
Q Consensus 146 ~~~~~~~~~aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~g~ 225 (398)
-++...++ .-=+...-+|.+++++|...++.| ..+|.+++++.+..|.-|--.+++-..-....-.+...++
T Consensus 116 lTr~~~~~-----N~lis~F~s~~~liq~L~~scyiP---~ysg~~pp~~rg~~yiDGg~snnlP~~~~~~TvTvSpF~g 187 (354)
T KOG3773|consen 116 LTRVKDRE-----NVLISEFPSRDELIQALMCSCYIP---MYSGLKPPIFRGVRYIDGGTSNNLPEADEELTVTVSPFSG 187 (354)
T ss_pred EEeeeehh-----hhhhhccccHHHHHHHHHHhccCc---cccCCCCcceeeEEEecccccccccccCccceEEeCCCCC
Confidence 22221221 112335579999999999999886 4888999999999888775434333322222222222333
Q ss_pred cccchHHHHHHHHHhCC--CchhhhcCCcEEEEEEeccCCCceeEEeccCChhhHHHHHHHhcccccccCCcccceeCCe
Q 015942 226 AFRLGAVLRDILQKFLP--DDVHTRSSGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVLTSSFIPGYLAPRPATMFRNR 303 (398)
Q Consensus 226 ~~~~~~~l~~~L~~~l~--~~~~e~~~~rL~I~aT~l~~~~~~~l~~~f~s~~~LidAV~AS~aiP~~f~pv~~~~~~G~ 303 (398)
.+++....+.. ..+.. .++..+++.+-.+-.++.-|.++..++..|...+.+..+.--+-..++ +- ...+
T Consensus 188 ~~DIcP~d~S~-~~l~~~~~~~~irls~rNl~r~~~~l~PP~~~~l~~~~~~G~~Da~~Fl~~~~~~---~~----~~~~ 259 (354)
T KOG3773|consen 188 ESDICPVDKSM-LLLLVNFANQSIRLSTRNLVRLTRALFPPRRLILDQFCQQGFLDALRFLKKNGLG---PA----TRNR 259 (354)
T ss_pred ccccCCCCCch-hhhcccccceeeeechhHHHHhhhhccCCcHHHHHHHHhcchhHHHHHHHhcCCC---CC----ccce
Confidence 34432222211 11111 112223333322223333334444555666566666655555555443 22 1456
Q ss_pred EEEeccccCCCCchhhccceeecCCchhhcccccceecCCCCCCCcchhccccceEEccCCHHHHHHHHHHHHHHHHHHH
Q 015942 304 LCIDGGLTLFMPPTSASNTIRVCAFPASALRLQGIGISPDCNPENRASRRELFNWALEPAEDQILDKLFEFGYLDAAVWA 383 (398)
Q Consensus 304 ~yvDGGl~~n~P~~~~~~ti~v~~f~~~~lg~~~i~I~~~~~~~~~~s~~~l~~~~l~P~~~~~l~elf~~Gy~dA~~~l 383 (398)
.++|||. .-.|...+..++.+|...- ...++.+++++++-+..+.+++.+ +.++-.+.+.++++.||.++..|.
T Consensus 260 ~~~~~~~-~~~~p~~a~~~~r~~~~~r---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~k~~~~~~~~~a~~~ 333 (354)
T KOG3773|consen 260 LCVDGGL-LFMPPTEAAKEVRVCASNR---KLKGIENCPDCNPLNRADSRQLLN--ALEPLEDEVLKLFELGYADAATWA 333 (354)
T ss_pred eeecchh-hccCChhhhhhhHHHHHHH---HhcccccCCcCCcCchhhhHHHHh--hchhhHHHHHHHhccchhhHHHHh
Confidence 8999999 5566666666777762211 122345888988877766666555 455556677779999999999999
Q ss_pred HhCCCccccccc
Q 015942 384 ENNPIEKIVEDE 395 (398)
Q Consensus 384 ~~~~~~~~~~~~ 395 (398)
+.++++..+.++
T Consensus 334 ~~~p~~~~ty~~ 345 (354)
T KOG3773|consen 334 EMNPVEGLTYDD 345 (354)
T ss_pred ccCCeeeeEeec
Confidence 999888776654
No 45
>cd07202 cPLA2_Grp-IVC Group IVC cytoplasmic phospholipase A2; catalytic domain; Ca-independent. Group IVC cPLA2, a small 61 kDa protein, is a single domain alpha/beta hydrolase. It lacks a C2 domain; therefore, it has no Ca-dependence. Group IVC cPLA2 is also referred to as cPLA2-gamma. The cPLA2-gamma enzyme is predominantly found in cardiac and skeletal muscles, and to a lesser extent in the brain. Human cPLA2-gamma is approximately 30% identical to cPLA2-alpha. The catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 be
Probab=97.58 E-value=4.3e-05 Score=78.22 Aligned_cols=62 Identities=23% Similarity=0.144 Sum_probs=50.8
Q ss_pred cCCCcEEEEcCCcchHH-HHHHHHHHHHHcCCCCCCCcEEeccHHHHHH-HHHHcC-C--CHHHHHH
Q 015942 150 VVTTPGFSFSAAGLLFP-YHLGVAQLLIEKGYIKETTPLAGSSAGAIAC-AVIASG-A--SMQEALN 211 (398)
Q Consensus 150 ~~~~~aLvLsGGG~rG~-~hiGVlkaL~e~gl~~~~d~IaGTSaGAivA-alla~g-~--~~~el~~ 211 (398)
..+++||++||||.|.+ +++|++++|.+.|++...++++|.|.|++.. +++... . +.+++.+
T Consensus 37 ~~P~i~ia~SGGG~RAm~~~~G~l~al~~~GLl~~~tY~sglSGgsWl~~sLy~nn~w~t~v~~l~~ 103 (430)
T cd07202 37 KAPVIAVLGSGGGLRAMIACLGVLSELDKAGLLDCVTYLAGVSGSTWCMSSLYTEPDWSTKLQTVED 103 (430)
T ss_pred cCCeEEEEecCccHHHHHhccHHHHHhhhCChhhhhhhhccccchHHHHHHHHhcCCccccHHHHHH
Confidence 35789999999999994 8999999999999998899999999999884 555542 2 3555544
No 46
>cd07201 cPLA2_Grp-IVB-IVD-IVE-IVF Group IVB, IVD, IVE, and IVF cytosolic phospholipase A2; catalytic domain; Ca-dependent. Group IVB, IVD, IVE, and IVF cPLA2 consists of two domains: the regulatory C2 domain and alpha/beta hydrolase PLA2 domain. Group IVB, IVD, IVE, and IVF cPLA2 are also referred to as cPLA2-beta, -delta, -epsilon, and -zeta respectively. cPLA2-beta is approximately 30% identical to cPLA2-alpha and it shows low enzymatic activity compared to cPLA2alpha. cPLA2-beta hydrolyzes palmitic acid from 1-[14C]palmitoyl-2-arachidonoyl-PC and arachidonic acid from 1-palmitoyl-2[14C]arachidonoyl-PC, but not from 1-O-alkyl-2[3H]arachidonoyl-PC. cPLA2-delta, -epsilon, and -zeta are approximately 45-50% identical to cPLA2-beta and 31-37% identical to cPLA2-alpha. It's possible that cPLA2-beta, -delta, -epsilon, and -zeta may have arisen by gene duplication from an ancestral gene. The catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bon
Probab=97.42 E-value=0.00031 Score=73.95 Aligned_cols=62 Identities=13% Similarity=0.055 Sum_probs=50.5
Q ss_pred cCCCcEEEEcCCcchHH-HHHHHHHHHHHcCCCCCCCcEEeccHHHHHH-HHHHc-CCCHHHHHH
Q 015942 150 VVTTPGFSFSAAGLLFP-YHLGVAQLLIEKGYIKETTPLAGSSAGAIAC-AVIAS-GASMQEALN 211 (398)
Q Consensus 150 ~~~~~aLvLsGGG~rG~-~hiGVlkaL~e~gl~~~~d~IaGTSaGAivA-alla~-g~~~~el~~ 211 (398)
..+.+|+++||||.|.+ ..+|++++|.+.|++...++++|.|.|++.- +++.. ..+-.++.+
T Consensus 51 ~~P~Igia~SGGGyRAml~gaG~l~al~~~GLLq~~tYlaGlSGg~Wl~gSLy~npn~ss~dl~~ 115 (541)
T cd07201 51 EVPVVAVMTTGGGTRALTSMYGSLLGLQKLGLLDCVSYITGLSGSTWTMATLYEDPNWSQKDLEG 115 (541)
T ss_pred cCCeEEEEecCccHHHHHhccHHHHhhhcCCchhhhheecccCccHHHHHHHHcCCCCchhhHHH
Confidence 45789999999999995 7999999999999998899999999999994 55554 344344433
No 47
>cd07200 cPLA2_Grp-IVA Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent. Group IVA cPLA2, an 85 kDa protein, consists of two domains: the regulatory C2 domain and the alpha/beta hydrolase PLA2 domain. Group IVA cPLA2 is also referred to as cPLA2-alpha. The catalytic domain of cytosolic phospholipase A2 (cPLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile
Probab=96.73 E-value=0.00073 Score=71.06 Aligned_cols=53 Identities=21% Similarity=0.136 Sum_probs=46.2
Q ss_pred cCCCcEEEEcCCcchHH-HHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHc
Q 015942 150 VVTTPGFSFSAAGLLFP-YHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIAS 202 (398)
Q Consensus 150 ~~~~~aLvLsGGG~rG~-~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~ 202 (398)
..+++||++||||.|.+ .-+|+++||.+-||+...++++|.|.|++.-+.++.
T Consensus 42 ~~P~Iaia~SGGGyRAMl~gaG~l~Ald~gGLLq~aTYlaGLSGgsWlvgsl~~ 95 (505)
T cd07200 42 EVPVIALLGSGGGFRAMVGMSGAMKALYDSGVLDCATYVAGLSGSTWYMSTLYS 95 (505)
T ss_pred cCCeEEEEecCccHHHHhhccHHHHhhhcCChhhhhhhhhcCCccHHHHHHHHh
Confidence 35789999999999995 799999999999999889999999999987544443
No 48
>PF01735 PLA2_B: Lysophospholipase catalytic domain; InterPro: IPR002642 This family consists of lysophospholipase / phospholipase B 3.1.1.5 from EC and cytosolic phospholipase A2 which also has a C2 domain IPR000008 from INTERPRO. Phospholipase B enzymes catalyse the release of fatty acids from lysophsopholipids and are capable in vitro of hydrolyzing all phospholipids extractable from yeast cells []. Cytosolic phospholipase A2 associates with natural membranes in response to physiological increases in Ca2+ and selectively hydrolyses arachidonyl phospholipids [], the aligned region corresponds the carboxy-terminal Ca2+-independent catalytic domain of the protein as discussed in [].; GO: 0004620 phospholipase activity, 0009395 phospholipid catabolic process; PDB: 1CJY_B.
Probab=96.66 E-value=0.002 Score=68.09 Aligned_cols=49 Identities=22% Similarity=0.177 Sum_probs=38.2
Q ss_pred cEEEEcCCcchHH-HHHHHHHHHH--------HcCCCCCCCcEEeccHHHHHHHHHHc
Q 015942 154 PGFSFSAAGLLFP-YHLGVAQLLI--------EKGYIKETTPLAGSSAGAIACAVIAS 202 (398)
Q Consensus 154 ~aLvLsGGG~rG~-~hiGVlkaL~--------e~gl~~~~d~IaGTSaGAivAalla~ 202 (398)
|||++||||.|.+ +-+|+|.||. ..||+.-.++++|.|.|++.-+.++.
T Consensus 1 Iaia~SGGG~RAml~gaG~l~Ald~R~~~~~~~gGLLq~~tY~sGlSGgsW~~~sl~~ 58 (491)
T PF01735_consen 1 IAIAGSGGGYRAMLAGAGVLSALDSRNPGANGTGGLLQCATYISGLSGGSWLVGSLYS 58 (491)
T ss_dssp EEEEE---HHHHHHHHHHHHHHHH--------HCS-GGGECEEEE-HHHHHHHHHH--
T ss_pred CeEEecCchHHHHHHHHHHHHHhhhhccccccccchhhhhhhhhhcCcchhhhhhhhh
Confidence 6899999999995 7999999999 88999889999999999998776643
No 49
>smart00022 PLAc Cytoplasmic phospholipase A2, catalytic subunit. Cytosolic phospholipases A2 hydrolyse arachidonyl phospholipids. Family includes phospholipases B isoforms.
Probab=96.42 E-value=0.0019 Score=68.88 Aligned_cols=54 Identities=26% Similarity=0.241 Sum_probs=47.7
Q ss_pred cCCCcEEEEcCCcchHH-HHHHHHHHHHH-------cCCCCCCCcEEeccHHHHHHHHHHcC
Q 015942 150 VVTTPGFSFSAAGLLFP-YHLGVAQLLIE-------KGYIKETTPLAGSSAGAIACAVIASG 203 (398)
Q Consensus 150 ~~~~~aLvLsGGG~rG~-~hiGVlkaL~e-------~gl~~~~d~IaGTSaGAivAalla~g 203 (398)
..+++||++||||.|.+ ..+|+++||.+ -||+...++++|.|.|++.-+.++..
T Consensus 74 ~~P~Igia~SGGGyRAml~gaG~l~ald~R~~~~~lgGLLq~~tYlaGlSGgsWlv~sl~~n 135 (549)
T smart00022 74 DVPVIAIAGSGGGFRAMVGGAGVLKAMDNRTDGHGLGGLLQSATYLAGLSGGTWLVGTLASN 135 (549)
T ss_pred cCceEEEEecCCCHHHHHhccHHHHHhhhcccccccccHhhhhhhhhccchHHHHHHHHhhC
Confidence 45889999999999995 79999999999 48888899999999999998776654
No 50
>KOG1325 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.26 E-value=0.0019 Score=68.36 Aligned_cols=54 Identities=26% Similarity=0.258 Sum_probs=47.8
Q ss_pred cCCCcEEEEcCCcchHH-HHHHHHHHHHHc-------CCCCCCCcEEeccHHHHHHHHHHcC
Q 015942 150 VVTTPGFSFSAAGLLFP-YHLGVAQLLIEK-------GYIKETTPLAGSSAGAIACAVIASG 203 (398)
Q Consensus 150 ~~~~~aLvLsGGG~rG~-~hiGVlkaL~e~-------gl~~~~d~IaGTSaGAivAalla~g 203 (398)
..+++|++.||||.|.+ .-.|+|.+|.++ ||+...++|+|.|.|++.-+-++..
T Consensus 46 d~P~vaIa~SGGG~RAMl~g~G~Laamder~~~~~l~GLLqs~tYlaGlSGstW~vssLa~n 107 (571)
T KOG1325|consen 46 DGPVVGIAGSGGGLRAMLSGAGALAAMDERTDNAGLGGLLQSATYLAGLSGGSWLVSSLAVN 107 (571)
T ss_pred CCCeEEEEecCCCHHHHhhhhHHHHHHHhhccCCcccchhhhhhhhcccCCCceeeeeeEEC
Confidence 47899999999999996 678999999999 9998899999999999887665543
No 51
>cd07203 cPLA2_Fungal_PLB Fungal Phospholipase B-like; cPLA2 GrpIVA homologs; catalytic domain. Fungal phospholipase B are Group IV cPLA2 homologs. Aspergillus PLA2 is Ca-dependent, yet it does not contain a C2 domain. PLB deacylates both sn-1 and sn-2 chains of phospholipids and are abundantly expressed in fungi. It shows lysophospholipase (lysoPL) and transacylase activities. The active site residues from cPLA2 are also conserved in PLB. Like cPLA2, PLB also has a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). It includes PLB1 from Schizosaccharomyces pombe, PLB2 from Candida glabrata, and PLB3 from Saccharomyces cerevisiae. PLB1, PLB2, and PLB3 show PLB and lysoPL activities; PLB3 is specific for phosphoinositides.
Probab=96.12 E-value=0.0035 Score=66.55 Aligned_cols=61 Identities=25% Similarity=0.286 Sum_probs=49.2
Q ss_pred cCCCcEEEEcCCcchHH-HHHHHHHHHHHc----------CCCCCCCcEEeccHHHHHHHHHHcC-C-CHHHHH
Q 015942 150 VVTTPGFSFSAAGLLFP-YHLGVAQLLIEK----------GYIKETTPLAGSSAGAIACAVIASG-A-SMQEAL 210 (398)
Q Consensus 150 ~~~~~aLvLsGGG~rG~-~hiGVlkaL~e~----------gl~~~~d~IaGTSaGAivAalla~g-~-~~~el~ 210 (398)
..+++||++||||.|.+ ..+|+++||..+ ||+...++++|.|.|++.-+.++.. . +.+++.
T Consensus 61 ~~P~Igia~SGGGyRAMl~GaG~l~AlD~Rt~~~~~~glgGLLQsatYlaGLSGGsWlvgSl~~Nnf~sv~~l~ 134 (552)
T cd07203 61 NGPRIGIAVSGGGYRAMLTGAGAIAAMDNRTDNATEHGLGGLLQSSTYLSGLSGGSWLVGSLASNNFTSVQDLL 134 (552)
T ss_pred cCCeEEEEecCccHHHHHhccHHHHhhhcccccccccccccHHHHhhHhhhcCccchhhhhhhhCCCCCHHHHh
Confidence 45889999999999995 799999999864 7888889999999999987666543 2 344443
No 52
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=96.09 E-value=0.01 Score=62.76 Aligned_cols=160 Identities=16% Similarity=0.089 Sum_probs=95.2
Q ss_pred CCCcEEEEcCCcchHHHHHHHHHHHHHc---CCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCCcc
Q 015942 151 VTTPGFSFSAAGLLFPYHLGVAQLLIEK---GYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENCRRRGTAF 227 (398)
Q Consensus 151 ~~~~aLvLsGGG~rG~~hiGVlkaL~e~---gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~~~~g~~~ 227 (398)
..+..+...|||.+ -.-++-+.++. -...-|+.+.|||.|++.++-++.+.+.+++...+..+....+.....-
T Consensus 292 ~~~~lv~~~G~G~~---~~q~l~~~e~~~~~a~~~~f~w~~gtstg~~~~~~i~~~~s~d~v~~~y~~~k~~~F~~~r~~ 368 (503)
T KOG0513|consen 292 VDDNLVLSDGGGIP---IIQVLYWIEKRCGTAAWGYFDWFNGTSTGSTIMADIALDGSSDEVDRMYLQMKDVVFDGLRSE 368 (503)
T ss_pred ccceEEEecCCCCh---hHHHHHhHHHhcccccccccccccccCcCceeehhhhhcccHHHHHHHHHHHhHHhhhcccCC
Confidence 34556777889988 44455555555 2333478999999999999999998888877766655544433221111
Q ss_pred cchHHHHHHHHHhCCCchhhhcCC-cEEEEEEeccCC----------------CceeE--Eec---cCC--hhhHHHHHH
Q 015942 228 RLGAVLRDILQKFLPDDVHTRSSG-RVRVAVTQILWR----------------PRGLL--VDQ---FDS--KEDLINAVL 283 (398)
Q Consensus 228 ~~~~~l~~~L~~~l~~~~~e~~~~-rL~I~aT~l~~~----------------~~~~l--~~~---f~s--~~~LidAV~ 283 (398)
.....++.+++..+|+....+..+ ++.|........ +.+.. .++ ... ..-++++.+
T Consensus 369 ~~~~~Ie~~~~~~~G~~~~~di~~~~~nl~~~~~~~~~~~l~~~rn~~~~i~~~~~~~~~~snde~~~~~~~~l~we~~r 448 (503)
T KOG0513|consen 369 YNYVRIECAIDRLFGDAPSMDIDGIRLNLTGLLVDITGEELLMARNYRHNINGGKPRSEEVSNDEALEEPAMQLVWEAKR 448 (503)
T ss_pred CCccchhhhhhcccCccccccCCcchhhhhhhhccccHHHHHHhhccccccccccccccccccchhhhhHHHHHHHHHHH
Confidence 113455666666666543333333 333332221000 00000 000 011 123468999
Q ss_pred HhcccccccCCcccceeCCeEEEeccccCCCCchhh
Q 015942 284 TSSFIPGYLAPRPATMFRNRLCIDGGLTLFMPPTSA 319 (398)
Q Consensus 284 AS~aiP~~f~pv~~~~~~G~~yvDGGl~~n~P~~~~ 319 (398)
.|++.|..|.+. +..++|||...|.|....
T Consensus 449 rss~a~~~f~~~------~~~~~d~~~~~~n~~ld~ 478 (503)
T KOG0513|consen 449 RSSRAPPTFPPS------EGKFIDGGLIANNPALDL 478 (503)
T ss_pred hccCCCCccccc------ccceeecCccCCCcchhh
Confidence 999999888776 346999999999998655
No 53
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=85.92 E-value=3 Score=40.46 Aligned_cols=55 Identities=25% Similarity=0.309 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 015942 164 LFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENC 220 (398)
Q Consensus 164 rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~ 220 (398)
..+++++.++.|.+.|+. ++.+.|.|.|-+.|+.++--.+.++.+++.......+
T Consensus 65 i~~~~~a~~~~l~~~Gi~--p~~~~GhSlGE~aA~~~ag~~~~~~~l~l~~~r~~~~ 119 (298)
T smart00827 65 LFAVQVALARLWRSWGVR--PDAVVGHSLGEIAAAYVAGVLSLEDAARLVAARGRLM 119 (298)
T ss_pred HHHHHHHHHHHHHHcCCc--ccEEEecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 456788889999999997 4799999999999987765578888887766555443
No 54
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=85.72 E-value=1.3 Score=47.05 Aligned_cols=167 Identities=14% Similarity=0.110 Sum_probs=93.2
Q ss_pred CCcEEEEcCCcchHHHHHHHHHHHHHc-----C------CCCCCCc-EEeccHHHHHHHHHHcCCC-------HHHH-HH
Q 015942 152 TTPGFSFSAAGLLFPYHLGVAQLLIEK-----G------YIKETTP-LAGSSAGAIACAVIASGAS-------MQEA-LN 211 (398)
Q Consensus 152 ~~~aLvLsGGG~rG~~hiGVlkaL~e~-----g------l~~~~d~-IaGTSaGAivAalla~g~~-------~~el-~~ 211 (398)
.-.-|.++|||.+|+.|.=....++.+ | +...+|+ ++|+++|.+++++.-.... ..++ +.
T Consensus 34 ~~~~lsld~gg~~gi~~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~~~g~~~~gl~~aml~a~~~~~~P~~~a~~~~~~ 113 (503)
T KOG0513|consen 34 LVTILSLDGGGSRGINQGVSLAYLELRLQNIDGDPSAARLADYFDVSIAGTNTGGLITAMLFAPNDCGRPRFGATDILWK 113 (503)
T ss_pred cceEEEEcCccceehhhhhhhcccHHHHHhccCChHhhHhhhccCceeeccCCchhhhhhhhccccccCccccccchhhh
Confidence 345699999999999887666655544 2 2334788 9999999999998754321 1222 22
Q ss_pred HHHHHHHHHH--------hc------------CCcccc-----hHHHHHHHHHhCCCchhhhcCCc----EEEEEEeccC
Q 015942 212 ATKTLAENCR--------RR------------GTAFRL-----GAVLRDILQKFLPDDVHTRSSGR----VRVAVTQILW 262 (398)
Q Consensus 212 ~~~~~~~~~~--------~~------------g~~~~~-----~~~l~~~L~~~l~~~~~e~~~~r----L~I~aT~l~~ 262 (398)
...+...... .. +..+.. ........++.+++.+....-.+ ..|.+-++.
T Consensus 114 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~~~~i~~ldl~- 192 (503)
T KOG0513|consen 114 FNLEKAPKLLEKFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENLLVVIPCLDLK- 192 (503)
T ss_pred hhhcCCCccccccccccccccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCcceEEEeeccC-
Confidence 2222111100 00 011110 12222333344555444322222 455555565
Q ss_pred CCceeEEeccCChhh---------HHHHHHHh--cccccccCC-cccceeCC------eEEEecc-ccCCCCchhh
Q 015942 263 RPRGLLVDQFDSKED---------LINAVLTS--SFIPGYLAP-RPATMFRN------RLCIDGG-LTLFMPPTSA 319 (398)
Q Consensus 263 ~~~~~l~~~f~s~~~---------LidAV~AS--~aiP~~f~p-v~~~~~~G------~~yvDGG-l~~n~P~~~~ 319 (398)
...|.+++.+..... +++.+.+. ++-|.+|+| ..+...+| ..++||| +..+.|...+
T Consensus 193 ~~~P~lf~~~~~~~~~~v~~~~~~~~~~c~~t~~sa~~~~f~~~~~~~~~Dg~~~~~~~~~~~~g~~~m~n~t~~~ 268 (503)
T KOG0513|consen 193 SLTPNLFSIYDALGTKIVPLLDFKAIDICIDTYGSAAPTIFPPILGFPSEDGQGIKTVCVLLDGGDIAMNNPTLHA 268 (503)
T ss_pred cCCceeeeeeccccccchhhhhhhhhhhhhccccccCccccCcccccccccccccceeeEEecchhhhccCchHhh
Confidence 445666654432222 34667777 888999999 43334555 2679999 8888887654
No 55
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=84.03 E-value=3.9 Score=39.80 Aligned_cols=54 Identities=22% Similarity=0.210 Sum_probs=43.9
Q ss_pred chHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 015942 163 LLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAE 218 (398)
Q Consensus 163 ~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~ 218 (398)
+..+.+++..+.|.+.|+. ++.+.|.|.|-+.|+.++...+.++..++.....+
T Consensus 58 ~i~~~q~al~~~l~~~g~~--P~~v~GhS~GE~aAa~~aG~~s~e~a~~lv~~r~~ 111 (295)
T TIGR03131 58 CILAAGVAAWRALLALLPR--PSAVAGYSVGEYAAAVVAGVLTFDDALRLVALRAA 111 (295)
T ss_pred HHHHHHHHHHHHHHhcCCC--CcEEeecCHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3567889999999999996 57999999999999988777888888777554443
No 56
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=83.71 E-value=2.6 Score=41.64 Aligned_cols=55 Identities=27% Similarity=0.336 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 015942 164 LFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENC 220 (398)
Q Consensus 164 rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~ 220 (398)
..+.+++..+.|.+.|+. ++.+.|.|.|-+.|+..+--.+.++..+........+
T Consensus 67 i~~~~~al~~~l~~~Gi~--P~~v~GhSlGE~aA~~aaG~ls~e~a~~lv~~R~~~m 121 (318)
T PF00698_consen 67 IFAIQVALARLLRSWGIK--PDAVIGHSLGEYAALVAAGALSLEDALRLVYERARLM 121 (318)
T ss_dssp HHHHHHHHHHHHHHTTHC--ESEEEESTTHHHHHHHHTTSSSHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhcccccc--cceeeccchhhHHHHHHCCccchhhhhhhHHHHHHHH
Confidence 346789999999999987 5899999999998775444468888888766554433
No 57
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=83.42 E-value=4.2 Score=39.14 Aligned_cols=56 Identities=25% Similarity=0.201 Sum_probs=43.6
Q ss_pred chHHHHHHHHHHHHHcC-CCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 015942 163 LLFPYHLGVAQLLIEKG-YIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAENC 220 (398)
Q Consensus 163 ~rG~~hiGVlkaL~e~g-l~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~~ 220 (398)
+..+.+++..+.|.+.| +. ++.+.|.|.|-++|+.++--.+.++..+++....+.+
T Consensus 64 ~i~~~~~al~~~l~~~g~i~--p~~v~GhS~GE~aAa~~aG~ls~eda~~lv~~r~~~~ 120 (290)
T TIGR00128 64 ALYVVSAILYLKLKEQGGLK--PDFAAGHSLGEYSALVAAGALDFETALKLVKKRGELM 120 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCC--CCEEeecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 34567888889999998 87 4799999999988777765578888888776555443
No 58
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=81.03 E-value=2.1 Score=40.60 Aligned_cols=87 Identities=22% Similarity=0.194 Sum_probs=42.7
Q ss_pred cceecccCCCChhh--HHHHHHhhhhccCCC--CccHH-HhhhhhHHhhhhccCCCcEEEEcCCcchHHHHHHHHHHHHH
Q 015942 103 LIERSEKLGSSGED--YKERIGAVMEDEIEP--EVIWE-QRVRDIEAEKERRVVTTPGFSFSAAGLLFPYHLGVAQLLIE 177 (398)
Q Consensus 103 ~~~~~~~~~~t~~~--~ee~i~~v~~~~~~~--~~~~~-~k~~~~~a~~~~~~~~~~aLvLsGGG~rG~~hiGVlkaL~e 177 (398)
+..|-+...++... .++...++++..... +++.. .-++.++ +.-...-.+..+||-.+.+ |+.|.|
T Consensus 34 ~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~~~~~~Ie----~~l~~~d~IyVgGGNTF~L-----L~~lke 104 (224)
T COG3340 34 TIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLSKPPLAAIE----NKLMKADIIYVGGGNTFNL-----LQELKE 104 (224)
T ss_pred eEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeeccCCCHHHHH----HhhhhccEEEECCchHHHH-----HHHHHH
Confidence 55677777777665 555555655543221 11110 0011112 1111233455555555543 444445
Q ss_pred cCCCC-------CCCcEEeccHHHHHHH
Q 015942 178 KGYIK-------ETTPLAGSSAGAIACA 198 (398)
Q Consensus 178 ~gl~~-------~~d~IaGTSaGAivAa 198 (398)
.|+.. +=....|.||||++++
T Consensus 105 ~gld~iIr~~vk~G~~YiG~SAGA~ia~ 132 (224)
T COG3340 105 TGLDDIIRERVKAGTPYIGWSAGANIAG 132 (224)
T ss_pred hCcHHHHHHHHHcCCceEEeccCceeec
Confidence 44211 1135899999999976
No 59
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=78.74 E-value=2 Score=41.13 Aligned_cols=45 Identities=22% Similarity=0.226 Sum_probs=25.6
Q ss_pred CcEEEEcCCcchHH----HHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHH
Q 015942 153 TPGFSFSAAGLLFP----YHLGVAQLLIEKGYIKETTPLAGSSAGAIACAV 199 (398)
Q Consensus 153 ~~aLvLsGGG~rG~----~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAal 199 (398)
.-++.++||=..-+ ..-|+.+.|.+. +... .+++|+||||++++-
T Consensus 80 ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~-~~~G-~~~~G~SAGAii~~~ 128 (233)
T PRK05282 80 AEAIFVGGGNTFQLLKQLYERGLLAPIREA-VKNG-TPYIGWSAGANVAGP 128 (233)
T ss_pred CCEEEECCccHHHHHHHHHHCCcHHHHHHH-HHCC-CEEEEECHHHHhhhc
Confidence 33666666654332 233555555443 1111 359999999998654
No 60
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=71.84 E-value=4.1 Score=35.98 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=22.3
Q ss_pred CcEEEEcCCcchH----HHHHHHHHHHHHc---CCCCCCCcEEeccHHHHHH
Q 015942 153 TPGFSFSAAGLLF----PYHLGVAQLLIEK---GYIKETTPLAGSSAGAIAC 197 (398)
Q Consensus 153 ~~aLvLsGGG~rG----~~hiGVlkaL~e~---gl~~~~d~IaGTSaGAivA 197 (398)
--++-|+||=..= +-..|+.+.|.+. |. +++|+||||++.
T Consensus 36 ad~I~~~GG~~~~l~~~l~~t~l~~~i~~~~~~G~-----vi~G~SAGA~i~ 82 (154)
T PF03575_consen 36 ADAIFLGGGDTFRLLRQLKETGLDEAIREAYRKGG-----VIIGTSAGAMIL 82 (154)
T ss_dssp SSEEEE--S-HHHHHHHHHHTTHHHHHHHHHHTTS-----EEEEETHHHHCT
T ss_pred CCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCC-----EEEEEChHHhhc
Confidence 3456666665332 2334555555543 43 599999999883
No 61
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=71.58 E-value=6.7 Score=36.91 Aligned_cols=44 Identities=23% Similarity=0.249 Sum_probs=27.7
Q ss_pred CCcEEEEcCCcchHHHH----HHHHHHHHH---cCCCCCCCcEEeccHHHHHHHHH
Q 015942 152 TTPGFSFSAAGLLFPYH----LGVAQLLIE---KGYIKETTPLAGSSAGAIACAVI 200 (398)
Q Consensus 152 ~~~aLvLsGGG~rG~~h----iGVlkaL~e---~gl~~~~d~IaGTSaGAivAall 200 (398)
..-++.++||-..-+.+ -++.+.|.+ +|. +++|+||||++.+-.
T Consensus 83 ~ad~I~~~GG~~~~~~~~l~~t~l~~~l~~~~~~G~-----v~~G~SAGA~i~~~~ 133 (217)
T cd03145 83 DADGIFFTGGDQLRITSALGGTPLLDALRKVYRGGV-----VIGGTSAGAAVMSDT 133 (217)
T ss_pred hCCEEEEeCCcHHHHHHHHcCChHHHHHHHHHHcCC-----EEEEccHHHHhhhhc
Confidence 45567777776543333 244444444 444 499999999997644
No 62
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=70.67 E-value=16 Score=36.56 Aligned_cols=56 Identities=21% Similarity=0.230 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHHHHcCCCC----CCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Q 015942 164 LFPYHLGVAQLLIEKGYIK----ETTPLAGSSAGAIACAVIASGASMQEALNATKTLAEN 219 (398)
Q Consensus 164 rG~~hiGVlkaL~e~gl~~----~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~ 219 (398)
..+.+++.++.|...|+.+ +++.++|.|.|-+.|+..+--.+.++.+++.....+.
T Consensus 101 i~~~~~a~~~~l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG~ls~e~al~lv~~R~~~ 160 (343)
T PLN02752 101 IYVASLAAVEKLRARDGGQAVIDSVDVCAGLSLGEYTALVFAGALSFEDGLKLVKLRGEA 160 (343)
T ss_pred HHHHHHHHHHHHHhcCCCcccccCCCeeeeccHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 4567888889998888643 3477899999998888866556888887776654443
No 63
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=70.44 E-value=8.2 Score=37.31 Aligned_cols=46 Identities=22% Similarity=0.228 Sum_probs=28.3
Q ss_pred CCCcEEEEcCCcchHHH----HHHHHHHHHHcCCCCCCCcEEeccHHHHHHH
Q 015942 151 VTTPGFSFSAAGLLFPY----HLGVAQLLIEKGYIKETTPLAGSSAGAIACA 198 (398)
Q Consensus 151 ~~~~aLvLsGGG~rG~~----hiGVlkaL~e~gl~~~~d~IaGTSaGAivAa 198 (398)
....++.|+||=..=+. ..++.++|.+. +... .+++|+||||++.+
T Consensus 81 ~~ad~I~~~GGnq~~l~~~l~~t~l~~~l~~~-~~~G-~vi~G~SAGA~i~~ 130 (250)
T TIGR02069 81 SNATGIFFTGGDQLRITSLLGDTPLLDRLRKR-VHEG-IILGGTSAGAAVMS 130 (250)
T ss_pred hhCCEEEEeCCCHHHHHHHHcCCcHHHHHHHH-HHcC-CeEEEccHHHHhcc
Confidence 35567888877643222 23665655544 2111 35999999999875
No 64
>PF07812 TfuA: TfuA-like protein; InterPro: IPR012924 This domain consists of a group of sequences that are similar to the core of TfuA protein (Q52872 from SWISSPROT). This protein is involved in the production of trifolitoxin (TFX), a gene-encoded, post-translationally modified peptide antibiotic []. The role of TfuA in TFX synthesis is unknown, and it may be involved in other cellular processes [].
Probab=64.21 E-value=7.7 Score=33.43 Aligned_cols=35 Identities=26% Similarity=0.318 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHH-HcCC
Q 015942 165 FPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVI-ASGA 204 (398)
Q Consensus 165 G~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAall-a~g~ 204 (398)
..+|--++.+| ++|+. ++.++||||+-|+=+ ..|+
T Consensus 9 aV~HkEIL~Al-~~Gv~----V~GasSMGALRAaEl~~fGM 44 (120)
T PF07812_consen 9 AVWHKEILWAL-SQGVR----VFGASSMGALRAAELAPFGM 44 (120)
T ss_pred CccHHHHHHHH-HCCCE----EEecccHHHHHHHHhHhcCC
Confidence 36788889887 55664 799999999999844 4565
No 65
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=59.66 E-value=25 Score=32.53 Aligned_cols=47 Identities=15% Similarity=0.232 Sum_probs=27.4
Q ss_pred CCcEEEEcCCcchHHHHH----HHHHHHHHcCCCCCCCcEEeccHHHHHHHHH
Q 015942 152 TTPGFSFSAAGLLFPYHL----GVAQLLIEKGYIKETTPLAGSSAGAIACAVI 200 (398)
Q Consensus 152 ~~~aLvLsGGG~rG~~hi----GVlkaL~e~gl~~~~d~IaGTSaGAivAall 200 (398)
..-++.++||=..-+.+. +.+++|.+. +.. =.+++|+||||++.+-.
T Consensus 80 ~ad~I~~~GG~~~~~~~~l~~t~~~~~i~~~-~~~-G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 80 EADGIFVGGGNQLRLLSVLRETPLLDAILKR-VAR-GVVIGGTSAGAAVMGET 130 (210)
T ss_pred hCCEEEEcCCcHHHHHHHHHhCChHHHHHHH-HHc-CCeEEEcCHHHHHhhhc
Confidence 455677777654433222 234444433 111 13699999999998765
No 66
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=57.23 E-value=35 Score=34.16 Aligned_cols=56 Identities=23% Similarity=0.259 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Q 015942 164 LFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLAEN 219 (398)
Q Consensus 164 rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~~~ 219 (398)
..+..+.+++.|.+++....++.++|+|-|-..|...+--.+.++..++.......
T Consensus 66 l~~~s~a~~~~l~~~~~~~~p~~~aGHSlGEysAl~~ag~~~~ed~~~Lv~~RG~~ 121 (310)
T COG0331 66 LLLVSLAAYRVLAEQGLGVKPDFVAGHSLGEYSALAAAGVLSFEDALKLVRKRGKL 121 (310)
T ss_pred HHHHHHHHHHHHHHhcCCCCCceeecccHhHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 45667788899999883333689999999999888776656778887776654433
No 67
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=53.72 E-value=16 Score=37.24 Aligned_cols=39 Identities=26% Similarity=0.204 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCC
Q 015942 164 LFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGA 204 (398)
Q Consensus 164 rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~ 204 (398)
...=-.+.++.|+++|.-+ -.++|.|+|+.+|++.++-.
T Consensus 158 ~i~E~~~Ll~Wl~~~G~~~--~g~~G~SmGG~~A~laa~~~ 196 (348)
T PF09752_consen 158 TILESRALLHWLEREGYGP--LGLTGISMGGHMAALAASNW 196 (348)
T ss_pred HHHHHHHHHHHHHhcCCCc--eEEEEechhHhhHHhhhhcC
Confidence 3344566788899998863 47999999999999988754
No 68
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=46.67 E-value=48 Score=42.40 Aligned_cols=52 Identities=17% Similarity=0.203 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 015942 164 LFPYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIASGASMQEALNATKTLA 217 (398)
Q Consensus 164 rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~~~~~~ 217 (398)
.++.+++.++.|.+.|+. ++.++|+|.|-+.|+..+--.+.++.+++...-.
T Consensus 657 I~a~q~Al~~lL~~~Gi~--Pd~v~GHSlGE~aAa~aAGvls~edal~Lv~~Rg 708 (2582)
T TIGR02813 657 IGTLSMGQYKLFTQAGFK--ADMTAGHSFGELSALCAAGVISDDDYMMLAFSRG 708 (2582)
T ss_pred HHHHHHHHHHHHHHcCCc--cceeecCCHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 456788889999999998 4789999999988887665568888777655443
No 69
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=42.57 E-value=26 Score=32.73 Aligned_cols=46 Identities=13% Similarity=0.028 Sum_probs=25.8
Q ss_pred CCcEEEEcCCcchH----HHHHHHHHHHHHcCCCCCCCcEEeccHHHHHHHH
Q 015942 152 TTPGFSFSAAGLLF----PYHLGVAQLLIEKGYIKETTPLAGSSAGAIACAV 199 (398)
Q Consensus 152 ~~~aLvLsGGG~rG----~~hiGVlkaL~e~gl~~~~d~IaGTSaGAivAal 199 (398)
...++.|.||-..- +-..|+.+.|.+. +.. =.+++|+||||++..-
T Consensus 80 ~ad~I~l~GG~~~~~~~~l~~~~l~~~l~~~-~~~-g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 80 EADVIYVGGGNTFNLLAQWREHGLDAILKAA-LER-GVVYIGWSAGSNCWFP 129 (212)
T ss_pred cCCEEEECCchHHHHHHHHHHcCHHHHHHHH-HHC-CCEEEEECHhHHhhCC
Confidence 45678888853222 2223444444443 111 1359999999998654
No 70
>cd02252 nylC_like nylC-like family; composed of proteins with similarity to Flavobacterium endo-type 6-aminohexanoate-oligomer hydrolase (EIII), the product of the nylon oligomer degradation gene, nylC. EIII is an amide hydrolase that catalyzes the degradation of highly-polymerized 6-aminohexanoate oligomers. Together with other nylon degradation enzymes, such as 6-aminohexanoate cyclic dimer hydrolase (EI) and 6-aminohexanoate dimer hydrolase (EII), EIII plays a role in the detoxification and biological removal of the synthetic by-products of nylon manufacture. EIII shows sequence similarity to L-aminopeptidase D-amidase/D-esterase (DmpA), an aminopeptidase that releases N-terminal D and L amino acids from peptide substrates. Like DmpA, EIII undergoes autocatalytic cleavage in front of a nucleophile to form a heterodimer. DmpA shows similarity in catalytic mechanism to N-terminal nucleophile (Ntn) hydrolases, which are enzymes that catalyze the cleavage of amide bonds through the nucl
Probab=41.42 E-value=29 Score=33.94 Aligned_cols=29 Identities=21% Similarity=0.194 Sum_probs=25.8
Q ss_pred CCcEEEEcCCcchH-HHHHHHHHHHHHcCC
Q 015942 152 TTPGFSFSAAGLLF-PYHLGVAQLLIEKGY 180 (398)
Q Consensus 152 ~~~aLvLsGGG~rG-~~hiGVlkaL~e~gl 180 (398)
.--+++|+||...| ..+-||+++|+|+|+
T Consensus 57 ~v~aIvLtggsa~GL~aa~gv~~~l~e~g~ 86 (260)
T cd02252 57 KVHAIVLSGGSAFGLAAADGVMRALEERGV 86 (260)
T ss_pred cccEEEEeCCchhhHHHHHHHHHHHHHhCC
Confidence 34589999999999 799999999999964
No 71
>TIGR02627 rhamnulo_kin rhamnulokinase. This model describes rhamnulokinase, an enzyme that catalyzes the second step in rhamnose catabolism.
Probab=39.08 E-value=1.2e+02 Score=31.48 Aligned_cols=90 Identities=13% Similarity=0.160 Sum_probs=51.2
Q ss_pred hhHHHHHHhhhhccCCCCccHHHhhhhhHHhhhhccCCCcEEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHH
Q 015942 115 EDYKERIGAVMEDEIEPEVIWEQRVRDIEAEKERRVVTTPGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGA 194 (398)
Q Consensus 115 ~~~ee~i~~v~~~~~~~~~~~~~k~~~~~a~~~~~~~~~~aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGA 194 (398)
++.++.+.+|+|... .....-++.++ +... ....-+.+.|||++.-+-.-++.-....-+.. ..--+++.||
T Consensus 356 ~~~~~l~RAv~Egva---~~~r~~~e~l~--~~~~-~~~~~i~~~GGga~s~~w~Qi~ADvlg~pV~~--~~~e~~a~Ga 427 (454)
T TIGR02627 356 ESDAELARCIFDSLA---LLYRQVLLELA--ELRG-KPISQLHIVGGGSQNAFLNQLCADACGIRVIA--GPVEASTLGN 427 (454)
T ss_pred CCHHHHHHHHHHHHH---HHHHHHHHHHH--HhhC-CCcCEEEEECChhhhHHHHHHHHHHhCCceEc--CCchHHHHHH
Confidence 356777888888752 22333334444 2211 22345889999988766544444333333321 1222567899
Q ss_pred HHHHHHHcCC--CHHHHHHH
Q 015942 195 IACAVIASGA--SMQEALNA 212 (398)
Q Consensus 195 ivAalla~g~--~~~el~~~ 212 (398)
.+.+.+++|. +.+++.+.
T Consensus 428 A~~a~~~~G~~~~~~~~~~~ 447 (454)
T TIGR02627 428 IGVQLMALDEINDMAAFRQI 447 (454)
T ss_pred HHHHHHhcCCcCCHHHHHHH
Confidence 9999999984 54555443
No 72
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=37.42 E-value=37 Score=31.02 Aligned_cols=32 Identities=22% Similarity=0.106 Sum_probs=22.9
Q ss_pred HHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCCC
Q 015942 172 AQLLIEKGYIKETTPLAGSSAGAIACAVIASGAS 205 (398)
Q Consensus 172 lkaL~e~gl~~~~d~IaGTSaGAivAalla~g~~ 205 (398)
.+.|.+.++. .-.+.|.|+|+.+|..++....
T Consensus 57 ~~~l~~~~~~--~~~lvG~S~Gg~va~~~a~~~~ 88 (242)
T PRK11126 57 SQTLQSYNIL--PYWLVGYSLGGRIAMYYACQGL 88 (242)
T ss_pred HHHHHHcCCC--CeEEEEECHHHHHHHHHHHhCC
Confidence 3344444654 2479999999999999887654
No 73
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=35.03 E-value=29 Score=29.17 Aligned_cols=18 Identities=22% Similarity=0.364 Sum_probs=15.8
Q ss_pred CcEEeccHHHHHHHHHHc
Q 015942 185 TPLAGSSAGAIACAVIAS 202 (398)
Q Consensus 185 d~IaGTSaGAivAalla~ 202 (398)
=+|+|.|.|+.+|.+++.
T Consensus 66 i~itGHSLGGalA~l~a~ 83 (140)
T PF01764_consen 66 IVITGHSLGGALASLAAA 83 (140)
T ss_dssp EEEEEETHHHHHHHHHHH
T ss_pred chhhccchHHHHHHHHHH
Confidence 368999999999998875
No 74
>PF03576 Peptidase_S58: Peptidase family S58 ; InterPro: IPR005321 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S58 (DmpA aminopeptidase family, clan PB(S)). The protein fold of the peptidase unit for members of this family resembles that of archaean proteasome subunit B, the type example of clan PB. The type example is aminopeptidase DmpA from OOchrobactrum anthropi. This family also contains proteins that have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases in the family. L-aminopeptidase D-Ala-esterase/amidase (DmpA) from O. anthropi releases the N-terminal L and/or D-Ala residues from peptide substrates. This is the only known enzyme to liberate N-terminal amino acids with both D and L stereospecificity. DmpA active form is an alphabeta heterodimer, which results from a putative autocatalytic cleavage of an inactive precursor polypeptide. DmpA shows structural homology to N-terminal nucleophile (Ntn) hydrolase family members, and may work by a similar catalytic mechanism, however their secondary structure elements differ significantly [].; PDB: 2DRH_D 3N5I_D 3N33_A 3NFB_A 3N2W_C 3NDV_D 1B65_C 3AXG_O 3S3U_A.
Probab=34.71 E-value=36 Score=34.32 Aligned_cols=26 Identities=19% Similarity=0.198 Sum_probs=24.8
Q ss_pred EEEEcCCcchHHHHHHHHHHHHHcCC
Q 015942 155 GFSFSAAGLLFPYHLGVAQLLIEKGY 180 (398)
Q Consensus 155 aLvLsGGG~rG~~hiGVlkaL~e~gl 180 (398)
+++|+||-+.|+.+-||+++|+|++.
T Consensus 69 ~I~Ltggsa~Glaa~gv~~~l~e~~~ 94 (326)
T PF03576_consen 69 AIVLTGGSAFGLAADGVMRWLEERGI 94 (326)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHHTT
T ss_pred eEEEeCCchHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999974
No 75
>PRK10640 rhaB rhamnulokinase; Provisional
Probab=34.42 E-value=1.5e+02 Score=31.23 Aligned_cols=89 Identities=8% Similarity=0.090 Sum_probs=51.0
Q ss_pred hHHHHHHhhhhccCCCCccHHHhhhhhHHhhhhccCCCcEEEEcCCcchHHHHHHHHHHHHHcCCCCCCCcEEeccHHHH
Q 015942 116 DYKERIGAVMEDEIEPEVIWEQRVRDIEAEKERRVVTTPGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAI 195 (398)
Q Consensus 116 ~~ee~i~~v~~~~~~~~~~~~~k~~~~~a~~~~~~~~~~aLvLsGGG~rG~~hiGVlkaL~e~gl~~~~d~IaGTSaGAi 195 (398)
+..+.+.+|+|... .....-++.++ +.. ......|.+.|||++--.-.-++.-....-+.. .. .-+++.||.
T Consensus 345 ~~~~l~RAvlEgva---~~~r~~l~~l~--~~~-g~~~~~i~~~GGga~s~~w~Qi~ADvlg~pV~~-~~-~ea~alGaa 416 (471)
T PRK10640 345 SDAELARCIFDSLA---LLYADVLHELA--QLR-GEPFSQLHIVGGGCQNALLNQLCADACGIRVIA-GP-VEASTLGNI 416 (471)
T ss_pred CHHHHHHHHHHHHH---HHHHHHHHHHH--HHh-CCCcceEEEECChhhhHHHHHHHHHHhCCCeee-CC-hhHHHHHHH
Confidence 56677778777652 22233334444 211 122346889999999866555444443333321 12 236678999
Q ss_pred HHHHHHcCC--CHHHHHHH
Q 015942 196 ACAVIASGA--SMQEALNA 212 (398)
Q Consensus 196 vAalla~g~--~~~el~~~ 212 (398)
+.+.++.|. +.+++.+.
T Consensus 417 ~~a~~a~G~~~~~~~~~~~ 435 (471)
T PRK10640 417 GIQLMTLDELNNVDDFRQV 435 (471)
T ss_pred HHHHHHcCCcCCHHHHHHH
Confidence 999999985 44555443
No 76
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=32.23 E-value=34 Score=30.83 Aligned_cols=24 Identities=33% Similarity=0.314 Sum_probs=17.7
Q ss_pred CCCCCCCcEEeccHHHHHHHHHHc
Q 015942 179 GYIKETTPLAGSSAGAIACAVIAS 202 (398)
Q Consensus 179 gl~~~~d~IaGTSaGAivAalla~ 202 (398)
|+-++--.++|.||||-.|+.++.
T Consensus 67 ~~d~~~i~l~G~SAGg~la~~~~~ 90 (211)
T PF07859_consen 67 GIDPERIVLIGDSAGGHLALSLAL 90 (211)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHH
T ss_pred cccccceEEeecccccchhhhhhh
Confidence 443333468999999999998873
No 77
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=32.07 E-value=64 Score=29.71 Aligned_cols=32 Identities=28% Similarity=0.255 Sum_probs=21.2
Q ss_pred HHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcC
Q 015942 171 VAQLLIEKGYIKETTPLAGSSAGAIACAVIASG 203 (398)
Q Consensus 171 VlkaL~e~gl~~~~d~IaGTSaGAivAalla~g 203 (398)
.+..+.+....+ -..+.|+|.|+..|..++..
T Consensus 48 ~l~~~i~~~~~~-~~~liGSSlGG~~A~~La~~ 79 (187)
T PF05728_consen 48 QLEQLIEELKPE-NVVLIGSSLGGFYATYLAER 79 (187)
T ss_pred HHHHHHHhCCCC-CeEEEEEChHHHHHHHHHHH
Confidence 344444443322 25899999999999988743
No 78
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=31.17 E-value=53 Score=30.42 Aligned_cols=30 Identities=23% Similarity=0.258 Sum_probs=22.0
Q ss_pred HHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHc
Q 015942 170 GVAQLLIEKGYIKETTPLAGSSAGAIACAVIAS 202 (398)
Q Consensus 170 GVlkaL~e~gl~~~~d~IaGTSaGAivAalla~ 202 (398)
-+.+.+.+.|- +|-|.|-|-||.+|++++.
T Consensus 92 ~l~~~i~~~GP---fdGvlGFSQGA~lAa~ll~ 121 (212)
T PF03959_consen 92 YLRDYIEENGP---FDGVLGFSQGAALAALLLA 121 (212)
T ss_dssp HHHHHHHHH------SEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHhcCC---eEEEEeecHHHHHHHHHHH
Confidence 45566666665 6899999999999998875
No 79
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=30.84 E-value=66 Score=31.21 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=23.8
Q ss_pred HHHHHHHHHc-CCCCCCCcEEeccHHHHHHHHHHcC
Q 015942 169 LGVAQLLIEK-GYIKETTPLAGSSAGAIACAVIASG 203 (398)
Q Consensus 169 iGVlkaL~e~-gl~~~~d~IaGTSaGAivAalla~g 203 (398)
..+++.|.+. |+..+--.++|.|+||.+|..++..
T Consensus 97 a~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~ 132 (275)
T cd00707 97 AKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKR 132 (275)
T ss_pred HHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHH
Confidence 3456666655 4432234699999999999988753
No 80
>PRK10566 esterase; Provisional
Probab=30.39 E-value=55 Score=30.24 Aligned_cols=34 Identities=18% Similarity=0.361 Sum_probs=23.1
Q ss_pred HHHHHHHcC-CCCCCCcEEeccHHHHHHHHHHcCC
Q 015942 171 VAQLLIEKG-YIKETTPLAGSSAGAIACAVIASGA 204 (398)
Q Consensus 171 VlkaL~e~g-l~~~~d~IaGTSaGAivAalla~g~ 204 (398)
+++.|.+++ +-++--.+.|.|+|+.++..++...
T Consensus 94 ~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~ 128 (249)
T PRK10566 94 LRAAIREEGWLLDDRLAVGGASMGGMTALGIMARH 128 (249)
T ss_pred HHHHHHhcCCcCccceeEEeecccHHHHHHHHHhC
Confidence 456666665 3222346999999999998877543
No 81
>PF03283 PAE: Pectinacetylesterase
Probab=29.20 E-value=48 Score=33.84 Aligned_cols=32 Identities=28% Similarity=0.408 Sum_probs=23.7
Q ss_pred HHHHHHHHcCCCC-CCCcEEeccHHHHHHHHHH
Q 015942 170 GVAQLLIEKGYIK-ETTPLAGSSAGAIACAVIA 201 (398)
Q Consensus 170 GVlkaL~e~gl~~-~~d~IaGTSaGAivAalla 201 (398)
.|++.|.++|+.. +--+++|+|||++-+.+.+
T Consensus 142 avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 142 AVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 4688888887632 2246899999999887765
No 82
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=28.37 E-value=64 Score=33.19 Aligned_cols=31 Identities=19% Similarity=0.250 Sum_probs=22.7
Q ss_pred HHHHcCCCCCCCcEEeccHHHHHHHHHHcCCC
Q 015942 174 LLIEKGYIKETTPLAGSSAGAIACAVIASGAS 205 (398)
Q Consensus 174 aL~e~gl~~~~d~IaGTSaGAivAalla~g~~ 205 (398)
.|++.|+.+ +..+.|.|+|+.+|..++...+
T Consensus 153 ll~~lgi~~-~~~vvG~SmGG~ial~~a~~~P 183 (389)
T PRK06765 153 LIKSLGIAR-LHAVMGPSMGGMQAQEWAVHYP 183 (389)
T ss_pred HHHHcCCCC-ceEEEEECHHHHHHHHHHHHCh
Confidence 344447653 5569999999999998887553
No 83
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=28.29 E-value=65 Score=29.71 Aligned_cols=20 Identities=30% Similarity=0.315 Sum_probs=16.7
Q ss_pred CcEEeccHHHHHHHHHHcCC
Q 015942 185 TPLAGSSAGAIACAVIASGA 204 (398)
Q Consensus 185 d~IaGTSaGAivAalla~g~ 204 (398)
..+.|.|+|+.++..++...
T Consensus 97 ~~lvG~S~Gg~~a~~~a~~~ 116 (278)
T TIGR03056 97 DGVIGHSAGAAIALRLALDG 116 (278)
T ss_pred ceEEEECccHHHHHHHHHhC
Confidence 47999999999999887654
No 84
>PRK07581 hypothetical protein; Validated
Probab=27.67 E-value=68 Score=31.49 Aligned_cols=35 Identities=23% Similarity=0.086 Sum_probs=24.3
Q ss_pred HHH-cCCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHH
Q 015942 175 LIE-KGYIKETTPLAGSSAGAIACAVIASGASMQEALN 211 (398)
Q Consensus 175 L~e-~gl~~~~d~IaGTSaGAivAalla~g~~~~el~~ 211 (398)
|.+ .|+.+ +..++|.|+|+.+|..+|.... +.+..
T Consensus 116 l~~~lgi~~-~~~lvG~S~GG~va~~~a~~~P-~~V~~ 151 (339)
T PRK07581 116 LTEKFGIER-LALVVGWSMGAQQTYHWAVRYP-DMVER 151 (339)
T ss_pred HHHHhCCCc-eEEEEEeCHHHHHHHHHHHHCH-HHHhh
Confidence 544 57642 2358999999999999987663 44433
No 85
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=27.53 E-value=67 Score=31.80 Aligned_cols=36 Identities=25% Similarity=0.340 Sum_probs=23.9
Q ss_pred HHHHHHHHHHc-CCCCCCCcEEeccHHHHHHHHHHcCC
Q 015942 168 HLGVAQLLIEK-GYIKETTPLAGSSAGAIACAVIASGA 204 (398)
Q Consensus 168 hiGVlkaL~e~-gl~~~~d~IaGTSaGAivAalla~g~ 204 (398)
++--+.++.+. |+-+ .-.++|.|+|+.+|..++...
T Consensus 123 ~a~dl~~ll~~l~l~~-~~~lvG~SmGG~vA~~~A~~~ 159 (343)
T PRK08775 123 QADAIALLLDALGIAR-LHAFVGYSYGALVGLQFASRH 159 (343)
T ss_pred HHHHHHHHHHHcCCCc-ceEEEEECHHHHHHHHHHHHC
Confidence 34444444443 5532 235999999999999988755
No 86
>PRK10673 acyl-CoA esterase; Provisional
Probab=27.44 E-value=73 Score=29.21 Aligned_cols=18 Identities=22% Similarity=0.300 Sum_probs=15.1
Q ss_pred cEEeccHHHHHHHHHHcC
Q 015942 186 PLAGSSAGAIACAVIASG 203 (398)
Q Consensus 186 ~IaGTSaGAivAalla~g 203 (398)
.+.|.|+|+.+|..++..
T Consensus 84 ~lvGhS~Gg~va~~~a~~ 101 (255)
T PRK10673 84 TFIGHSMGGKAVMALTAL 101 (255)
T ss_pred EEEEECHHHHHHHHHHHh
Confidence 688999999999888754
No 87
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=27.33 E-value=81 Score=27.26 Aligned_cols=30 Identities=30% Similarity=0.345 Sum_probs=20.5
Q ss_pred HHHHHHcCCCCCCCcEEeccHHHHHHHHHHcC
Q 015942 172 AQLLIEKGYIKETTPLAGSSAGAIACAVIASG 203 (398)
Q Consensus 172 lkaL~e~gl~~~~d~IaGTSaGAivAalla~g 203 (398)
.+.|.+.+.. .-.+.|.|.|+.++..++..
T Consensus 57 ~~~l~~~~~~--~~~lvG~S~Gg~~a~~~a~~ 86 (228)
T PF12697_consen 57 AELLDALGIK--KVILVGHSMGGMIALRLAAR 86 (228)
T ss_dssp HHHHHHTTTS--SEEEEEETHHHHHHHHHHHH
T ss_pred hhcccccccc--cccccccccccccccccccc
Confidence 3344444553 24789999999999988753
No 88
>PLN02847 triacylglycerol lipase
Probab=26.72 E-value=43 Score=36.61 Aligned_cols=17 Identities=24% Similarity=0.376 Sum_probs=14.8
Q ss_pred cEEeccHHHHHHHHHHc
Q 015942 186 PLAGSSAGAIACAVIAS 202 (398)
Q Consensus 186 ~IaGTSaGAivAalla~ 202 (398)
+|+|+|.||-+|++++.
T Consensus 254 VITGHSLGGGVAALLAi 270 (633)
T PLN02847 254 KIVGHSLGGGTAALLTY 270 (633)
T ss_pred EEeccChHHHHHHHHHH
Confidence 58999999999998764
No 89
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=26.45 E-value=72 Score=29.14 Aligned_cols=36 Identities=17% Similarity=0.116 Sum_probs=24.2
Q ss_pred HHHHHHHHc-CCCCCCCcEEeccHHHHHHHHHHcCCC
Q 015942 170 GVAQLLIEK-GYIKETTPLAGSSAGAIACAVIASGAS 205 (398)
Q Consensus 170 GVlkaL~e~-gl~~~~d~IaGTSaGAivAalla~g~~ 205 (398)
-+++.+.++ ++-++--.+.|.|+|+.++..+++..+
T Consensus 81 ~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p 117 (212)
T TIGR01840 81 QLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYP 117 (212)
T ss_pred HHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCc
Confidence 455555554 343333469999999999988876543
No 90
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=26.10 E-value=75 Score=30.24 Aligned_cols=34 Identities=12% Similarity=-0.120 Sum_probs=23.4
Q ss_pred HHHHHHHH-HcCCCCCCCcEEeccHHHHHHHHHHcCC
Q 015942 169 LGVAQLLI-EKGYIKETTPLAGSSAGAIACAVIASGA 204 (398)
Q Consensus 169 iGVlkaL~-e~gl~~~~d~IaGTSaGAivAalla~g~ 204 (398)
+-.+.++. +.++- .-.+.|.|+|+.+|..++...
T Consensus 89 a~~l~~~l~~l~~~--~~~lvGhS~Gg~va~~~a~~~ 123 (294)
T PLN02824 89 GEQLNDFCSDVVGD--PAFVICNSVGGVVGLQAAVDA 123 (294)
T ss_pred HHHHHHHHHHhcCC--CeEEEEeCHHHHHHHHHHHhC
Confidence 33444444 44553 247999999999999888654
No 91
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=25.86 E-value=80 Score=29.81 Aligned_cols=29 Identities=21% Similarity=0.083 Sum_probs=20.8
Q ss_pred HHHcCCCCCCCcEEeccHHHHHHHHHHcCCC
Q 015942 175 LIEKGYIKETTPLAGSSAGAIACAVIASGAS 205 (398)
Q Consensus 175 L~e~gl~~~~d~IaGTSaGAivAalla~g~~ 205 (398)
+.+.++.+ -.+.|.|+|+.+|..++...+
T Consensus 85 i~~l~~~~--~~LvG~S~GG~va~~~a~~~p 113 (276)
T TIGR02240 85 LDYLDYGQ--VNAIGVSWGGALAQQFAHDYP 113 (276)
T ss_pred HHHhCcCc--eEEEEECHHHHHHHHHHHHCH
Confidence 33335442 468999999999999987543
No 92
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=24.45 E-value=54 Score=28.32 Aligned_cols=17 Identities=18% Similarity=0.280 Sum_probs=15.3
Q ss_pred cEEeccHHHHHHHHHHc
Q 015942 186 PLAGSSAGAIACAVIAS 202 (398)
Q Consensus 186 ~IaGTSaGAivAalla~ 202 (398)
.|+|.|.||.+|.+++.
T Consensus 31 ~v~GHSlGg~lA~l~a~ 47 (153)
T cd00741 31 HVTGHSLGGALAGLAGL 47 (153)
T ss_pred EEEEcCHHHHHHHHHHH
Confidence 69999999999998874
No 93
>PLN02965 Probable pheophorbidase
Probab=24.34 E-value=75 Score=29.66 Aligned_cols=21 Identities=19% Similarity=0.128 Sum_probs=18.2
Q ss_pred CcEEeccHHHHHHHHHHcCCC
Q 015942 185 TPLAGSSAGAIACAVIASGAS 205 (398)
Q Consensus 185 d~IaGTSaGAivAalla~g~~ 205 (398)
-++.|.|+|+.++..++....
T Consensus 74 ~~lvGhSmGG~ia~~~a~~~p 94 (255)
T PLN02965 74 VILVGHSIGGGSVTEALCKFT 94 (255)
T ss_pred EEEEecCcchHHHHHHHHhCc
Confidence 489999999999999987653
No 94
>PRK11071 esterase YqiA; Provisional
Probab=24.21 E-value=97 Score=28.15 Aligned_cols=34 Identities=21% Similarity=0.160 Sum_probs=23.6
Q ss_pred HHHHHHHHHc-CCCCCCCcEEeccHHHHHHHHHHcCC
Q 015942 169 LGVAQLLIEK-GYIKETTPLAGSSAGAIACAVIASGA 204 (398)
Q Consensus 169 iGVlkaL~e~-gl~~~~d~IaGTSaGAivAalla~g~ 204 (398)
.-.+..+.++ ++. .-.+.|.|+|+.+|..++...
T Consensus 48 ~~~l~~l~~~~~~~--~~~lvG~S~Gg~~a~~~a~~~ 82 (190)
T PRK11071 48 AELLESLVLEHGGD--PLGLVGSSLGGYYATWLSQCF 82 (190)
T ss_pred HHHHHHHHHHcCCC--CeEEEEECHHHHHHHHHHHHc
Confidence 3345555544 443 257999999999999888654
No 95
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=24.09 E-value=89 Score=30.40 Aligned_cols=32 Identities=28% Similarity=0.244 Sum_probs=23.0
Q ss_pred HHHHHHHcCCCCCCCcEEeccHHHHHHHHHHcCC
Q 015942 171 VAQLLIEKGYIKETTPLAGSSAGAIACAVIASGA 204 (398)
Q Consensus 171 VlkaL~e~gl~~~~d~IaGTSaGAivAalla~g~ 204 (398)
+++.|.+.+..+ -.+.|.|+|+.++..++...
T Consensus 89 ai~~L~~~~~~~--v~LvG~SmGG~vAl~~A~~~ 120 (266)
T TIGR03101 89 AYRWLIEQGHPP--VTLWGLRLGALLALDAANPL 120 (266)
T ss_pred HHHHHHhcCCCC--EEEEEECHHHHHHHHHHHhC
Confidence 345565555432 47999999999999887654
No 96
>cd02253 DmpA L-Aminopeptidase D-amidase/D-esterase (DmpA) family; DmpA catalyzes the release of N-terminal D and L amino acids from peptide susbtrates. DmpA is synthesized as a single polypeptide precursor, which is autocatalytically cleaved to the active heterodimeric form. The cleavage results in two polypeptide chains, with one chain containing an N-terminal nucleophile. This group represents one of the rare aminopeptidases that are not metalloenzymes. DmpA shows similarity in catalytic mechanism to N-terminal nucleophile (Ntn) hydrolases, which are enzymes that catalyze the cleavage of amide bonds through the nucleophilic attack of the side chain of an N-terminal serine, threonine, or cysteine.
Probab=23.96 E-value=72 Score=32.43 Aligned_cols=27 Identities=0% Similarity=-0.043 Sum_probs=25.0
Q ss_pred cEEEEcCCcchHHHHHHHHHHHHHcCC
Q 015942 154 PGFSFSAAGLLFPYHLGVAQLLIEKGY 180 (398)
Q Consensus 154 ~aLvLsGGG~rG~~hiGVlkaL~e~gl 180 (398)
.+++|+||-+.|.++-||+++|+|++.
T Consensus 82 ~~IvLTggsa~G~aa~gv~~~l~e~~~ 108 (339)
T cd02253 82 TPILLTNTLSVGTVRDALIRWMLDQNP 108 (339)
T ss_pred CcEEEECccHHHHHHHHHHHHHHHhCC
Confidence 389999999999999999999999964
No 97
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=23.84 E-value=63 Score=29.30 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=24.3
Q ss_pred HHHHHHHHHcCC-CCCCCcEEeccHHHHHHHHHHc
Q 015942 169 LGVAQLLIEKGY-IKETTPLAGSSAGAIACAVIAS 202 (398)
Q Consensus 169 iGVlkaL~e~gl-~~~~d~IaGTSaGAivAalla~ 202 (398)
+-+++.|.+++. -++--.|.|.|+|+.++++++.
T Consensus 49 ~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 49 VAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp HHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 456677777763 2222368899999999998876
No 98
>PRK03592 haloalkane dehalogenase; Provisional
Probab=23.73 E-value=91 Score=29.69 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=23.3
Q ss_pred HHHHHHHHc-CCCCCCCcEEeccHHHHHHHHHHcCCC
Q 015942 170 GVAQLLIEK-GYIKETTPLAGSSAGAIACAVIASGAS 205 (398)
Q Consensus 170 GVlkaL~e~-gl~~~~d~IaGTSaGAivAalla~g~~ 205 (398)
..+..|.++ ++. .-.+.|.|+|+.+|..++...+
T Consensus 81 ~dl~~ll~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p 115 (295)
T PRK03592 81 RYLDAWFDALGLD--DVVLVGHDWGSALGFDWAARHP 115 (295)
T ss_pred HHHHHHHHHhCCC--CeEEEEECHHHHHHHHHHHhCh
Confidence 334444333 554 3579999999999998887653
No 99
>PRK13604 luxD acyl transferase; Provisional
Probab=23.68 E-value=96 Score=31.05 Aligned_cols=33 Identities=21% Similarity=0.150 Sum_probs=23.8
Q ss_pred HHHHHHHHHHcCCCCCCCcEEeccHHHHHHHHHHc
Q 015942 168 HLGVAQLLIEKGYIKETTPLAGSSAGAIACAVIAS 202 (398)
Q Consensus 168 hiGVlkaL~e~gl~~~~d~IaGTSaGAivAalla~ 202 (398)
-.+|++.|.+++.. + -.+.|.|+||.+|.+.|.
T Consensus 95 l~aaid~lk~~~~~-~-I~LiG~SmGgava~~~A~ 127 (307)
T PRK13604 95 LLTVVDWLNTRGIN-N-LGLIAASLSARIAYEVIN 127 (307)
T ss_pred HHHHHHHHHhcCCC-c-eEEEEECHHHHHHHHHhc
Confidence 34677788776543 2 469999999999866654
No 100
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=23.65 E-value=1.2e+02 Score=31.95 Aligned_cols=37 Identities=22% Similarity=0.182 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHc-CCCCCCCcEEeccHHHHHHHHHHcC
Q 015942 167 YHLGVAQLLIEK-GYIKETTPLAGSSAGAIACAVIASG 203 (398)
Q Consensus 167 ~hiGVlkaL~e~-gl~~~~d~IaGTSaGAivAalla~g 203 (398)
.-..+++.|.+. |+..+--.+.|.|+||.+|..++..
T Consensus 102 ~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~ 139 (442)
T TIGR03230 102 DVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSL 139 (442)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHh
Confidence 345566777654 5422235799999999999988753
No 101
>PRK00870 haloalkane dehalogenase; Provisional
Probab=22.51 E-value=99 Score=29.65 Aligned_cols=28 Identities=11% Similarity=0.083 Sum_probs=20.1
Q ss_pred HHHcCCCCCCCcEEeccHHHHHHHHHHcCC
Q 015942 175 LIEKGYIKETTPLAGSSAGAIACAVIASGA 204 (398)
Q Consensus 175 L~e~gl~~~~d~IaGTSaGAivAalla~g~ 204 (398)
|.+.++.+ -.+.|.|+|+++|..++...
T Consensus 109 l~~l~~~~--v~lvGhS~Gg~ia~~~a~~~ 136 (302)
T PRK00870 109 FEQLDLTD--VTLVCQDWGGLIGLRLAAEH 136 (302)
T ss_pred HHHcCCCC--EEEEEEChHHHHHHHHHHhC
Confidence 33445542 36899999999999888654
No 102
>PRK06489 hypothetical protein; Provisional
Probab=22.29 E-value=93 Score=31.02 Aligned_cols=27 Identities=15% Similarity=0.158 Sum_probs=20.2
Q ss_pred cCCCCCCCcEEeccHHHHHHHHHHcCCC
Q 015942 178 KGYIKETTPLAGSSAGAIACAVIASGAS 205 (398)
Q Consensus 178 ~gl~~~~d~IaGTSaGAivAalla~g~~ 205 (398)
.|+-+ +..++|.|+|+.+|..++...+
T Consensus 150 lgi~~-~~~lvG~SmGG~vAl~~A~~~P 176 (360)
T PRK06489 150 LGVKH-LRLILGTSMGGMHAWMWGEKYP 176 (360)
T ss_pred cCCCc-eeEEEEECHHHHHHHHHHHhCc
Confidence 45542 3358999999999999887653
No 103
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=21.92 E-value=2.2e+02 Score=30.83 Aligned_cols=41 Identities=17% Similarity=-0.003 Sum_probs=28.0
Q ss_pred HHHHHHH-HcCCCCCCCcEEeccHHHHHHHHHHcCCC-HHHHHHH
Q 015942 170 GVAQLLI-EKGYIKETTPLAGSSAGAIACAVIASGAS-MQEALNA 212 (398)
Q Consensus 170 GVlkaL~-e~gl~~~~d~IaGTSaGAivAalla~g~~-~~el~~~ 212 (398)
+..+.|. +.|+.| +.+.|.|.|-++|+..+--.+ .+.+...
T Consensus 253 aLa~ll~~~~GI~P--dav~GHSlGE~aAa~aAGvls~~dal~~v 295 (538)
T TIGR02816 253 LLTQLLCDEFAIKP--DFALGYSKGEASMWASLGVWKNPHALIEK 295 (538)
T ss_pred HHHHHHHHhcCCCC--CEEeecCHHHHHHHHHhCCCCcHHHHHHH
Confidence 3445563 568984 799999999999988764454 4444333
No 104
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=21.86 E-value=92 Score=29.07 Aligned_cols=34 Identities=21% Similarity=0.185 Sum_probs=23.0
Q ss_pred HHHHHHHHHc-CCCCCCCcEEeccHHHHHHHHHHcCC
Q 015942 169 LGVAQLLIEK-GYIKETTPLAGSSAGAIACAVIASGA 204 (398)
Q Consensus 169 iGVlkaL~e~-gl~~~~d~IaGTSaGAivAalla~g~ 204 (398)
+..+.++.+. ++.+ -.+.|.|+|+.+|..++...
T Consensus 88 ~~~l~~~l~~l~~~~--~~lvG~S~Gg~ia~~~a~~~ 122 (282)
T TIGR03343 88 ARAVKGLMDALDIEK--AHLVGNSMGGATALNFALEY 122 (282)
T ss_pred HHHHHHHHHHcCCCC--eeEEEECchHHHHHHHHHhC
Confidence 3444444444 4442 37999999999999888654
No 105
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=21.38 E-value=99 Score=30.66 Aligned_cols=30 Identities=23% Similarity=0.240 Sum_probs=21.6
Q ss_pred HHHHcCCCCCCCcEEeccHHHHHHHHHHcCC
Q 015942 174 LLIEKGYIKETTPLAGSSAGAIACAVIASGA 204 (398)
Q Consensus 174 aL~e~gl~~~~d~IaGTSaGAivAalla~g~ 204 (398)
.+.+.|+.+ +-.+.|.|+|+++|..++...
T Consensus 119 ~~~~l~~~~-~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 119 LLDHLGIEQ-IAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred HHHHcCCCC-ceEEEEECHHHHHHHHHHHHC
Confidence 344446642 247999999999999888654
No 106
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=21.06 E-value=1.5e+02 Score=29.58 Aligned_cols=52 Identities=15% Similarity=0.133 Sum_probs=32.6
Q ss_pred CCcEEEEcCCc-----chH-HHH----HHHHHHHHHc-CCCCCCCcEEeccHHHHHHHHHHcCCC
Q 015942 152 TTPGFSFSAAG-----LLF-PYH----LGVAQLLIEK-GYIKETTPLAGSSAGAIACAVIASGAS 205 (398)
Q Consensus 152 ~~~aLvLsGGG-----~rG-~~h----iGVlkaL~e~-gl~~~~d~IaGTSaGAivAalla~g~~ 205 (398)
.-.++-|-|+| -+| .|+ ...++.+... +..+ -.+.|.|.|+++|..+|+...
T Consensus 88 ~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~--~~lvghS~Gg~va~~~Aa~~P 150 (326)
T KOG1454|consen 88 RVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEP--VSLVGHSLGGIVALKAAAYYP 150 (326)
T ss_pred EEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcc--eEEEEeCcHHHHHHHHHHhCc
Confidence 34567777776 122 244 4444443333 3332 469999999999999998764
No 107
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=20.87 E-value=1.1e+02 Score=27.38 Aligned_cols=20 Identities=15% Similarity=0.159 Sum_probs=16.4
Q ss_pred CcEEeccHHHHHHHHHHcCC
Q 015942 185 TPLAGSSAGAIACAVIASGA 204 (398)
Q Consensus 185 d~IaGTSaGAivAalla~g~ 204 (398)
-.+.|.|+|+.+|..++...
T Consensus 82 ~~l~G~S~Gg~~a~~~a~~~ 101 (257)
T TIGR03611 82 FHFVGHALGGLIGLQLALRY 101 (257)
T ss_pred EEEEEechhHHHHHHHHHHC
Confidence 36999999999998887643
No 108
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=20.67 E-value=1.2e+02 Score=30.37 Aligned_cols=27 Identities=41% Similarity=0.492 Sum_probs=18.8
Q ss_pred HHHcCCCCCCCcEEeccHHHHHHHHHHcC
Q 015942 175 LIEKGYIKETTPLAGSSAGAIACAVIASG 203 (398)
Q Consensus 175 L~e~gl~~~~d~IaGTSaGAivAalla~g 203 (398)
|.+.++.+ -.+.|.|+|++++..++..
T Consensus 149 l~~l~~~~--~~lvGhS~Gg~ia~~~a~~ 175 (360)
T PLN02679 149 LEEVVQKP--TVLIGNSVGSLACVIAASE 175 (360)
T ss_pred HHHhcCCC--eEEEEECHHHHHHHHHHHh
Confidence 33335542 4789999999998877653
No 109
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=20.38 E-value=1e+02 Score=31.70 Aligned_cols=38 Identities=24% Similarity=0.320 Sum_probs=27.3
Q ss_pred HHHHHc-CCCCCCCcEEeccHHHHHHHHHHcCCCHHHHHHH
Q 015942 173 QLLIEK-GYIKETTPLAGSSAGAIACAVIASGASMQEALNA 212 (398)
Q Consensus 173 kaL~e~-gl~~~~d~IaGTSaGAivAalla~g~~~~el~~~ 212 (398)
+.|.++ |+.. +..|.|.|+|++-|.-.+..++ +++...
T Consensus 137 ~~ll~~LGI~~-l~avvGgSmGGMqaleWa~~yP-d~V~~~ 175 (368)
T COG2021 137 RLLLDALGIKK-LAAVVGGSMGGMQALEWAIRYP-DRVRRA 175 (368)
T ss_pred HHHHHhcCcce-EeeeeccChHHHHHHHHHHhCh-HHHhhh
Confidence 445444 7763 6789999999999998888664 555443
No 110
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=20.32 E-value=94 Score=29.82 Aligned_cols=29 Identities=31% Similarity=0.385 Sum_probs=23.5
Q ss_pred HHHHHHHcCCCCCCCcEEeccHHHHHHHHHHc
Q 015942 171 VAQLLIEKGYIKETTPLAGSSAGAIACAVIAS 202 (398)
Q Consensus 171 VlkaL~e~gl~~~~d~IaGTSaGAivAalla~ 202 (398)
|.+++.++|- ||-|.|-|=||.+++++|.
T Consensus 95 l~~~i~enGP---FDGllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 95 LEDYIKENGP---FDGLLGFSQGAALAALLAG 123 (230)
T ss_pred HHHHHHHhCC---CccccccchhHHHHHHhhc
Confidence 3446667675 6899999999999999986
No 111
>PRK11460 putative hydrolase; Provisional
Probab=20.28 E-value=1.3e+02 Score=28.09 Aligned_cols=34 Identities=24% Similarity=0.239 Sum_probs=23.2
Q ss_pred HHHHHHHHc-CCCCCCCcEEeccHHHHHHHHHHcC
Q 015942 170 GVAQLLIEK-GYIKETTPLAGSSAGAIACAVIASG 203 (398)
Q Consensus 170 GVlkaL~e~-gl~~~~d~IaGTSaGAivAalla~g 203 (398)
.+++.+.++ ++.++--.+.|.|.||.++..++..
T Consensus 89 ~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~ 123 (232)
T PRK11460 89 ETVRYWQQQSGVGASATALIGFSQGAIMALEAVKA 123 (232)
T ss_pred HHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHh
Confidence 445555554 5543334799999999999877653
Done!